BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 003584
         (809 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Vitis vinifera]
          Length = 786

 Score = 1137 bits (2940), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 545/814 (66%), Positives = 650/814 (79%), Gaps = 33/814 (4%)

Query: 1   MFKLDFKILNFSLRC-----RSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEA 55
           M++L+  I  FS +       +++    R   N   +V  +SD N  L + S  G +D+A
Sbjct: 1   MYRLNLGIYTFSRKVCHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDA 60

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            +LF+ M DRD  +WNTMI AYANSGRL EA+KLF ETP ++  TWSSLI GY  YG D+
Sbjct: 61  RKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDV 120

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA ELFW+MQ EG RP+Q+T  +VLR+CS+  LL++G+Q H +AIKT FD NAFVVTGLV
Sbjct: 121 EALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLV 180

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMYAKCKCI EAEYLF++ PD +NHV WT M+TGYSQNG G KAIECFRDMR EG+E NQ
Sbjct: 181 DMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQ 240

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
           FTFPSILTAC ++SA  FGAQVHGCI+ SGF ANV+V SAL+DMY+KCGDL +ARR+LE 
Sbjct: 241 FTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLET 300

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
            E+D+ VSWNSMIVG  RQG  +EALSLF+ MH R +KID+FTYPSVLNCF+  +D+ NA
Sbjct: 301 MEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNA 360

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
            SVHSLIVKTGFE YK VNNAL+DMYAK+G  D AF VF  M DKDVISWTSL+TGC ++
Sbjct: 361 MSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHN 420

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           GSYEEAL+ F +MRI GI PD +V++++LSACAELTVLEFG+QVHA FLKSG  SSLSVD
Sbjct: 421 GSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVD 480

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           NSLV +YAKCGCI DAN+VFDSM  +DVITWTALI+G AQNG+G++              
Sbjct: 481 NSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRD-------------- 526

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
                         HAGL E+ R YF+SM++VYGIKPGP+HYACMIDLLGRSGKL+EAK 
Sbjct: 527 --------------HAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKE 572

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
           LL+QM  +PDATVWKALL+ACRVHG++ELGERAANNLFELEP NA+PYV LSN+YS AGK
Sbjct: 573 LLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGK 632

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
           WE+AA+ R+LMK RG+ KEPGCSW+E +S+VH F+SEDR HP   +IYSK+DEIM+LIKE
Sbjct: 633 WEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKE 692

Query: 716 AGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
           AGYVPDMNFALH+++EEGKE+GLAYHSEKLAVAFGLLT+P GAPIRIFKNLR+CGDCHTA
Sbjct: 693 AGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTA 752

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           MKY+S V+ RH+ILRDSN FHHF+ G CSC DYW
Sbjct: 753 MKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 786


>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 837

 Score = 1068 bits (2762), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 517/811 (63%), Positives = 640/811 (78%), Gaps = 5/811 (0%)

Query: 1   MFKLDFKILNFSLRCRSKIIGPARYTHNV-GNSVKPASDLNRALVDFSNSGEIDEAGQLF 59
           M K   K+L+F      K +   R  H     S +     N+ L   S SG++++A +LF
Sbjct: 30  MHKFSSKVLSFPHN-PCKFMAFLRSIHTTTAASYESIYQTNQLLNQLSKSGQVNDARKLF 88

Query: 60  EKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFE 119
           +KM  +D ++WNTMI++Y N GRL EA++LF+    K+  TWSS+I GY  +G  +EAF+
Sbjct: 89  DKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFD 148

Query: 120 LFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYA 179
           LF  M+LEG++ SQ+TL +VLR+CS  GL+Q GE  HG+ +K  F+ N FVVTGLVDMYA
Sbjct: 149 LFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYA 208

Query: 180 KCKCIFEAEYLFKMFP-DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTF 238
           KCKC+ EAE+LFK    D KNHV WT M+TGY+QNG G+KA+E FR M  +GVE NQ+TF
Sbjct: 209 KCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTF 268

Query: 239 PSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI 298
           P+ILTAC++V AR FG QVHG I+ SGF +NVYVQSAL+DMYAKCGDL +A+ +LE  E 
Sbjct: 269 PTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMED 328

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
           D+ VSWNS++VGF R G  +EAL LFK MH R++KIDD+T+PSVLNC    +   N KSV
Sbjct: 329 DDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCV--VGSINPKSV 386

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           H LI+KTGFE YK V+NAL+DMYAK G++DCA+ VF  M +KDVISWTSL+TG A + S+
Sbjct: 387 HGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSH 446

Query: 419 EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSL 478
           EE+LK F DMR++G+ PD  +V+SILSACAELT+LEFG+QVH  F+KSG   S SV NSL
Sbjct: 447 EESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSL 506

Query: 479 VLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDY 538
           V +YAKCGC++DA+ +F SM  +DVITWTA+I+G AQNGKG+ +L+FYD M++ GT+PD+
Sbjct: 507 VAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDF 566

Query: 539 ITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLD 598
           ITF+GLLFACSHAGL +  R YF+ M+KVYGIKPGP+HYACMIDL GRSGKL EAK LLD
Sbjct: 567 ITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLD 626

Query: 599 QMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWED 658
           QM  +PDATVWK+LLSACRVH +LEL ERAA NLFELEPMNAMPYV LSNMYS + KW D
Sbjct: 627 QMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWND 686

Query: 659 AARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGY 718
            A++RKLMKS+GI KEPGCSW+E NS+V+ FIS+DRGHP   +IY+KIDEI+L IKEAGY
Sbjct: 687 VAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAGY 746

Query: 719 VPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKY 778
           VPDM+F+LH++++EGKE+GLAYHSEKLAVAFGLL  P  APIRIFKNLRVCGDCH+AMKY
Sbjct: 747 VPDMSFSLHDMDKEGKEVGLAYHSEKLAVAFGLLAAPPSAPIRIFKNLRVCGDCHSAMKY 806

Query: 779 ISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           IS V+ RHIILRDSN FHHF+ G CSCGDYW
Sbjct: 807 ISRVFTRHIILRDSNCFHHFREGECSCGDYW 837


>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 852

 Score = 1012 bits (2617), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 501/785 (63%), Positives = 601/785 (76%), Gaps = 40/785 (5%)

Query: 27  HNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREA 86
           HN+ +S +     N+ L   S SG+ID+A +LF+KM  RD +TWNTM++ YAN GRL EA
Sbjct: 106 HNIADSYQSIFHSNQLLNGLSKSGQIDDARELFDKMLQRDEYTWNTMVSGYANVGRLVEA 165

Query: 87  KKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLK 146
           ++LFN    ++  TWSSLI GY  +G   EAF+LF +M+LEG +PSQYTL ++LR CS  
Sbjct: 166 RELFNGFSSRSSITWSSLISGYCRFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSAL 225

Query: 147 GLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK-NHVAWTT 205
           GL+Q+GE  HGY +K  F+ N +VV GLVDMYAKC+ I EAE LFK     K NHV WT 
Sbjct: 226 GLIQKGEMIHGYVVKNGFESNVYVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTA 285

Query: 206 MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
           M+TGY+QNG   KAIE FR M  EGVESNQFTFPSILTAC++VSA  FG QVHGCI+ +G
Sbjct: 286 MVTGYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNG 345

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
           F  N YVQSAL+DMYAKCGDL SA+R+LE  E D+ VSWNSMIVG  R GF +EA+ LFK
Sbjct: 346 FGCNAYVQSALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFK 405

Query: 326 KMHARDIKIDDFTYPSVLNC-FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
           KMHAR++KID +T+PSVLNC     ID    KSVH L++KTGFE YK V+NAL+DMYAK 
Sbjct: 406 KMHARNMKIDHYTFPSVLNCCIVGRID---GKSVHCLVIKTGFENYKLVSNALVDMYAKT 462

Query: 385 GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
            +L+CA+ VF  M +KDVISWTSL+TG   +GS+EE+LK F DMRISG+ PD  +V+SIL
Sbjct: 463 EDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKTFCDMRISGVSPDQFIVASIL 522

Query: 445 SACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVI 504
           SACAELT+LEFG+QVH+ F+K G  SSLSV+NSLV +YAKCGC++DA+ +F SMH RDVI
Sbjct: 523 SACAELTLLEFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKCGCLDDADAIFVSMHVRDVI 582

Query: 505 TWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESM 564
           TWTALI+G A+NGKG+++L+                                   YF+ M
Sbjct: 583 TWTALIVGYARNGKGRDSLK-----------------------------------YFQQM 607

Query: 565 DKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLEL 624
            K+YGI+PGP+HYACMIDL GR GKL EAK +L+QM  +PDATVWKALL+ACRVHG+LEL
Sbjct: 608 KKIYGIEPGPEHYACMIDLFGRLGKLDEAKEILNQMDVKPDATVWKALLAACRVHGNLEL 667

Query: 625 GERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNS 684
           GERAA NLFELEPMNAMPYV LSNMY  A KW+DAA++R+LMKS+GI KEPGCSW+E NS
Sbjct: 668 GERAATNLFELEPMNAMPYVMLSNMYLAARKWDDAAKIRRLMKSKGITKEPGCSWIEMNS 727

Query: 685 QVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEK 744
           ++H FISEDRGHP   +IYSKIDEI+  IKE GYVPDMNF+LH+++ EGKE GLAYHSEK
Sbjct: 728 RLHTFISEDRGHPREAEIYSKIDEIIRRIKEVGYVPDMNFSLHDMDREGKEAGLAYHSEK 787

Query: 745 LAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCS 804
           LAVAFGLL  P GAPIRIFKNLRVCGDCH+AMKYIS V+ RHIILRDSN FHHFK G CS
Sbjct: 788 LAVAFGLLASPPGAPIRIFKNLRVCGDCHSAMKYISGVFTRHIILRDSNCFHHFKEGECS 847

Query: 805 CGDYW 809
           C DYW
Sbjct: 848 CEDYW 852


>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score = 1003 bits (2594), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 493/814 (60%), Positives = 595/814 (73%), Gaps = 100/814 (12%)

Query: 1   MFKLDFKILNFSLRC-----RSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEA 55
           M++L+  I  FS +       +++    R   N   +V  +SD N  L + S  G +D+A
Sbjct: 1   MYRLNLGIYTFSRKVCHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDA 60

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            +LF+ M DRD  +WNTMI AYANSGRL EA+KLF ETP ++  TWSSLI GY  YG D+
Sbjct: 61  RKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDV 120

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA ELFW+MQ EG RP+Q+T  +VLR+CS+  LL++G+Q H +AIKT FD NAFVVTGLV
Sbjct: 121 EALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLV 180

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMYAKCKCI EAEYLF++ PD +NHV WT M+TGYSQNG G KAIECFRDMR EG+E NQ
Sbjct: 181 DMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQ 240

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
           FTFPSILTAC ++SA  FGAQVHGCI+ SGF ANV+V SAL+DMY+KCGDL +ARR+LE 
Sbjct: 241 FTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLET 300

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
            E+D+ VSWNSMIVG  RQG  +EALSLF+ MH R +KID+FTYPS+             
Sbjct: 301 MEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSL------------- 347

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
                            VNNAL+DMYAK+G  D AF VF  M DKDVISWTSL+TGC ++
Sbjct: 348 -----------------VNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHN 390

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           GSYEEAL+ F +MRI GI PD +V++++LSA                           +D
Sbjct: 391 GSYEEALRLFCEMRIMGIHPDQIVIAAVLSA---------------------------LD 423

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           NSLV +YAKCGCI DAN+VFDSM  +DVITWTALI+G AQNG+G++              
Sbjct: 424 NSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRD-------------- 469

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
                                   YF+SM++VYGIKPGP+HYACMIDLLGRSGKL+EAK 
Sbjct: 470 ------------------------YFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKE 505

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
           LL+QM  +PDATVWKALL+ACRVHG++ELGERAANNLFELEP NA+PYV LSN+YS AGK
Sbjct: 506 LLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGK 565

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
           WE+AA+ R+LMK RG+ KEPGCSW+E +S+VH F+SEDR HP   +IYSK+DEIM+LIKE
Sbjct: 566 WEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKE 625

Query: 716 AGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
           AGYVPDMNFALH+++EEGKE+GLAYHSEKLAVAFGLLT+P GAPIRIFKNLR+CGDCHTA
Sbjct: 626 AGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTA 685

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           MKY+S V+ RH+ILRDSN FHHF+ G CSC DYW
Sbjct: 686 MKYVSGVFHRHVILRDSNCFHHFREGACSCSDYW 719


>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  997 bits (2578), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 489/811 (60%), Positives = 593/811 (73%), Gaps = 38/811 (4%)

Query: 1   MFKLDFKILNFSLRCRSKIIGP--ARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQL 58
           MF + F+  NF  +C      P   R  H + +      D N+ L + S +G +DEA +L
Sbjct: 1   MFNIYFQTSNFFTKCNFHFKHPLFIRCIHGIAH-YSSNLDSNQLLSELSKNGRVDEARKL 59

Query: 59  FEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAF 118
           F++M  RD +TWN MI+AYAN G L EA+KLFNETP KN  TWSSL+ GY   G ++E  
Sbjct: 60  FDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGL 119

Query: 119 ELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMY 178
             F QM  +G +PSQYTL +VLR CS   LL  G+  H YAIK   + N FV TGLVDMY
Sbjct: 120 RQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMY 179

Query: 179 AKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTF 238
           +KCKC+ EAEYLF   PD KN+V WT M+TGY+QNG   KAI+CF++MR +G+ESN FTF
Sbjct: 180 SKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTF 239

Query: 239 PSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI 298
           PSILTAC ++SA  FG QVHGCI+ SGF  NVYVQSAL+DMYAKCGDL SAR +L+  EI
Sbjct: 240 PSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEI 299

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
           D+ V WNSMIVG    G+ +EAL LF KMH RDI+IDDFTYPSVL   AS  +L   +SV
Sbjct: 300 DDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESV 359

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           HSL +KTGF+  K V+NAL+DMYAKQGNL CA  VFN + DKDVISWTSL+TG  ++G +
Sbjct: 360 HSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFH 419

Query: 419 EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSL 478
           E+AL+ F DMR + +  D  VV+ + SACAELTV+EFG+QVHA F+KS   S LS +NSL
Sbjct: 420 EKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSL 479

Query: 479 VLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDY 538
           + +YAKCGC+ DA RVFDSM TR+VI+WTA+I+G AQN                      
Sbjct: 480 ITMYAKCGCLEDAIRVFDSMETRNVISWTAIIVGYAQN---------------------- 517

Query: 539 ITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLD 598
                        GL E  + YFESM+KVYGIKP  DHYACMIDLLGR+GK+ EA+ LL+
Sbjct: 518 -------------GLVETGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKINEAEHLLN 564

Query: 599 QMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWED 658
           +M  EPDAT+WK+LLSACRVHG+LELGERA  NL +LEP N++PYV LSNM+S AG+WED
Sbjct: 565 RMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWED 624

Query: 659 AARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGY 718
           AA +R+ MK+ GI KEPG SW+E  SQVH FISEDR HPL  +IYSKIDE+M+LIKEAG+
Sbjct: 625 AAHIRRAMKTMGINKEPGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMMILIKEAGH 684

Query: 719 VPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKY 778
           VPDMNFAL +++EE KE  LAYHSEKLAVAFGLLT+ +GAPIRIFKNLRVCGDCH+AMKY
Sbjct: 685 VPDMNFALRDMDEEAKERSLAYHSEKLAVAFGLLTVAKGAPIRIFKNLRVCGDCHSAMKY 744

Query: 779 ISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           IS+++ RHIILRD N FHHF  G CSCGD+W
Sbjct: 745 ISSIFKRHIILRDLNCFHHFIEGKCSCGDFW 775


>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  987 bits (2552), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 485/811 (59%), Positives = 590/811 (72%), Gaps = 38/811 (4%)

Query: 1   MFKLDFKILNFSLRCRSKIIGP--ARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQL 58
           MF + F+  NF  +C      P   R  H + +      D N+ L + S +G +DEA +L
Sbjct: 1   MFNIYFQTSNFFTKCNFHFKHPLFIRCIHGIAH-YSSNLDSNQLLSELSKNGRVDEARKL 59

Query: 59  FEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAF 118
           F++M  RD +TWN MI+AYAN G L EA+KLFNETP  N  TWSSL+ GY   G ++E  
Sbjct: 60  FDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGL 119

Query: 119 ELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMY 178
             F QM  +G +PSQYTL +VLR CS   LL  G+  H YAIK   + N FV TGLVDMY
Sbjct: 120 RQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMY 179

Query: 179 AKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTF 238
           +KCKC+ EAEYLF   PD KN+V WT M+TGY+QNG   KAI+CF++MR +G+ESN FTF
Sbjct: 180 SKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTF 239

Query: 239 PSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI 298
           PSILTAC ++SA  FG QVHGCI+ SGF  NVYVQSAL+DMYAKCGDL SAR +L+  EI
Sbjct: 240 PSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEI 299

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
           D+ V WNSMIVG    G+ +EAL LF KMH RDI+IDDFTYPSVL   AS  +L   +SV
Sbjct: 300 DDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESV 359

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           HSL +KTGF+  K V+NAL+DMYAKQGNL CA  VFN + DKDVISWTSL+TG  ++G +
Sbjct: 360 HSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFH 419

Query: 419 EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSL 478
           E+AL+ F DMR + +  D  VV+ + SACAELTV+EFG+QVHA F+KS   S LS +NSL
Sbjct: 420 EKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSL 479

Query: 479 VLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDY 538
           + +YAKCGC+ DA RV DSM TR+VI+WTA+I+G AQN                      
Sbjct: 480 ITMYAKCGCLEDAIRVXDSMETRNVISWTAIIVGYAQN---------------------- 517

Query: 539 ITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLD 598
                        GL E  + YFESM+KVYGIKP  D YACMIDLLGR+GK+ EA+ LL+
Sbjct: 518 -------------GLVETGQSYFESMEKVYGIKPASDRYACMIDLLGRAGKINEAEHLLN 564

Query: 599 QMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWED 658
           +M  EPDAT+WK+LLSACRVHG+LELGERA  NL +LEP N++PYV LSNM+S AG+WED
Sbjct: 565 RMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWED 624

Query: 659 AARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGY 718
           AA +R+ MK+ GI +EPG SW+E  SQVH FISEDR HPL  +IYSKIDE+M+LIKEAG+
Sbjct: 625 AAHIRRAMKTMGIXQEPGYSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMMILIKEAGH 684

Query: 719 VPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKY 778
           VPDMNFAL +++EE KE  LAYHSEKLAVAFGLLT+ +GAPIRIFKNLRVCGDCH+AMKY
Sbjct: 685 VPDMNFALRDMDEEAKERSLAYHSEKLAVAFGLLTVAKGAPIRIFKNLRVCGDCHSAMKY 744

Query: 779 ISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           IS+++ RHIILRD N FHHF  G CSCGD+W
Sbjct: 745 ISSIFKRHIILRDLNCFHHFIEGKCSCGDFW 775


>gi|15233050|ref|NP_191676.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|6850884|emb|CAB71047.1| putative protein [Arabidopsis thaliana]
 gi|332646643|gb|AEE80164.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 783

 Score =  938 bits (2425), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/754 (60%), Positives = 563/754 (74%), Gaps = 38/754 (5%)

Query: 27  HNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREA 86
           H+  +  K  S+L   L D S SG +DEA Q+F+KM +RD FTWNTMI AY+NS RL +A
Sbjct: 21  HSYADRTKLHSNL--LLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDA 78

Query: 87  KKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLK 146
           +KLF   P KN  +W++LI GY   G  +EAF LFW+MQ +G +P++YTL +VLR+C+  
Sbjct: 79  EKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSL 138

Query: 147 GLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTM 206
            LL RGEQ HG+ IKT FDL+  VV GL+ MYA+CK I EAEYLF+     KN+V WT+M
Sbjct: 139 VLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSM 198

Query: 207 ITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF 266
           +TGYSQNG+ FKAIECFRD+R EG +SNQ+TFPS+LTACA+VSA   G QVH CI+ SGF
Sbjct: 199 LTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGF 258

Query: 267 EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK 326
           + N+YVQSALIDMYAKC +++SAR LLE  E+D+ VSWNSMIVG  RQG   EALS+F +
Sbjct: 259 KTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGR 318

Query: 327 MHARDIKIDDFTYPSVLNCFA-SNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           MH RD+KIDDFT PS+LNCFA S  ++  A S H LIVKTG+  YK VNNAL+DMYAK+G
Sbjct: 319 MHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRG 378

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
            +D A  VF  M +KDVISWT+L+TG  ++GSY+EALK F +MR+ GI PD +V +S+LS
Sbjct: 379 IMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLS 438

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
           A AELT+LEFGQQVH  ++KSG  SSLSV+NSLV +Y KCG + DAN +F+SM  RD+IT
Sbjct: 439 ASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLIT 498

Query: 506 WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMD 565
           WT LI+G A+NG                                   L E+A+ YF+SM 
Sbjct: 499 WTCLIVGYAKNG-----------------------------------LLEDAQRYFDSMR 523

Query: 566 KVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELG 625
            VYGI PGP+HYACMIDL GRSG  ++ + LL QM  EPDATVWKA+L+A R HG++E G
Sbjct: 524 TVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENG 583

Query: 626 ERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQ 685
           ERAA  L ELEP NA+PYVQLSNMYS AG+ ++AA VR+LMKSR I KEPGCSWVE   +
Sbjct: 584 ERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGK 643

Query: 686 VHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKL 745
           VH F+SEDR HP   +IYSK+DE+MLLIKEAGY  DM+FALH++++EGKE+GLAYHSEKL
Sbjct: 644 VHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFALHDLDKEGKELGLAYHSEKL 703

Query: 746 AVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYI 779
           AVAFGLL +P GAPIRI KNLRVCGDCH+AMK +
Sbjct: 704 AVAFGLLVVPSGAPIRIIKNLRVCGDCHSAMKLL 737


>gi|297820962|ref|XP_002878364.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324202|gb|EFH54623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 767

 Score =  890 bits (2300), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/770 (57%), Positives = 545/770 (70%), Gaps = 60/770 (7%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  L D S SG +DEA Q+F+KM +RD FTWNTMI AY+NS RL +A++LF   P KN  
Sbjct: 33  NLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLADAEQLFRSNPVKNTI 92

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           +W++LI GY   G  +EAF LFW+MQ +G +P++YTL +VLR+C+   LL RGEQ HG+ 
Sbjct: 93  SWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLLLLLRGEQIHGHT 152

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           IKT FDL+  VV GL+ MYA+CK I EAEYLF      KN+V WT+M+TGYSQNG+ FKA
Sbjct: 153 IKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFDTMAGEKNNVTWTSMLTGYSQNGFAFKA 212

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           IECFRD+R +G +SNQ+TFPS+LTACA+VSA   G QVHGCI+ SGF+ N+YVQSALIDM
Sbjct: 213 IECFRDLRRDGNQSNQYTFPSVLTACASVSACRVGVQVHGCIVKSGFKTNIYVQSALIDM 272

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           YAKC DL+SAR LLE  E+D+ VSWNSMIVG  RQG  +EALS+F +MH RD+KIDDFT 
Sbjct: 273 YAKCRDLESARALLEGMEVDDVVSWNSMIVGCVRQGLIEEALSMFGRMHERDMKIDDFTI 332

Query: 340 PSVLNCFASN-IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
           PS+LNCFAS+  ++  A S H LIVK G                  G +D A  VF  M 
Sbjct: 333 PSILNCFASSRTEMKIASSAHCLIVKPGMR------------LTSLGIMDSALKVFEGMI 380

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
           +KDVISWT+L+TG  ++G YEEALK F +MR+ GI PD +V +S+LSA AELT+LEFGQQ
Sbjct: 381 EKDVISWTALVTGNTHNGFYEEALKLFCNMRVGGIYPDQIVTASVLSASAELTLLEFGQQ 440

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK 518
           VH  ++KSG  SSLSV+NSLV +Y KCG + DAN +F+SM  RD+ITWT +I+G      
Sbjct: 441 VHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCIIVG------ 494

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA 578
                                             L E A+ YF+SM  VYGI PGP+HYA
Sbjct: 495 ----------------------------------LIEEAQRYFDSMRTVYGITPGPEHYA 520

Query: 579 CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM 638
           CMIDL GRSG  ++A+ LL QM  EPDATVWKA+L+A R HG++E GERAA  L +LEP 
Sbjct: 521 CMIDLFGRSGDFVKAEELLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMKLEPN 580

Query: 639 NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPL 698
           NA+PYV LSNMYS AG+ ++AA VR+LMKSR I KEPGCSWVE   +VH F+SEDR HP 
Sbjct: 581 NAVPYVLLSNMYSAAGRQDEAANVRRLMKSRNINKEPGCSWVEEKGKVHSFMSEDRRHPR 640

Query: 699 RTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA 758
             +IYSK+DE+MLLIKEAGY+ DM+FALH++++EGKE+GLAYHSEKLAVAFGLL +P GA
Sbjct: 641 MVEIYSKVDEMMLLIKEAGYLADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGA 700

Query: 759 PIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDY 808
           PIRI KNLRVCGDCH+AMK +    L         +   F    C+ G Y
Sbjct: 701 PIRIIKNLRVCGDCHSAMKLLVTFALEE-------KLGKFCISVCNSGSY 743



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 126/315 (40%), Gaps = 69/315 (21%)

Query: 30  GNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDR----DGFTWNTMIAAYANS----- 80
           G  V      N  +V     G I+EA  +F +M +R    D FT  +++  +A+S     
Sbjct: 288 GMEVDDVVSWNSMIVGCVRQGLIEEALSMFGRMHERDMKIDDFTIPSILNCFASSRTEMK 347

Query: 81  -------------------GRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELF 121
                              G +  A K+F     K+  +W++L+ G ++ G   EA +LF
Sbjct: 348 IASSAHCLIVKPGMRLTSLGIMDSALKVFEGMIEKDVISWTALVTGNTHNGFYEEALKLF 407

Query: 122 WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
             M++ G  P Q    +VL   +   LL+ G+Q HG  IK+ F  +  V   LV MY KC
Sbjct: 408 CNMRVGGIYPDQIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKC 467

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
             + +A  +F    + ++ + WT +I G                     +E  Q  F S+
Sbjct: 468 GSLEDANVIFNSM-EIRDLITWTCIIVGL--------------------IEEAQRYFDSM 506

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
            T          G + + C               +ID++ + GD   A  LL   E++ +
Sbjct: 507 RTVYGITP----GPEHYAC---------------MIDLFGRSGDFVKAEELLHQMEVEPD 547

Query: 302 VS-WNSMIVGFARQG 315
            + W +++    + G
Sbjct: 548 ATVWKAILAASRKHG 562


>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
 gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
          Length = 514

 Score =  824 bits (2129), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/513 (75%), Positives = 444/513 (86%)

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
           E D+EVSWNS+I+G  R+GF ++ALS F+KM +RD+KID++T PSVLN FAS   + NA 
Sbjct: 2   EFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAI 61

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
           SVH LI+KTGFE YK VNNALIDMYAKQG LDCA MVF+ M DKDV+SWTSL+TG +++G
Sbjct: 62  SVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNG 121

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
           SYEEA+K F  MRISG+ PD + V+S+LSACAELTV++FGQQ+HA  +KSG  SSLSVDN
Sbjct: 122 SYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDN 181

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           SLV +YAKCG I DANR FD+M TRDVI+WTALI+G AQNG+GK +LQFYDQM+A GTKP
Sbjct: 182 SLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKP 241

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           DYITF+GLLFACSH GL  + R YFE+MDKVYGIKPGP+HYACMIDLLGRSGKL EAK L
Sbjct: 242 DYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGL 301

Query: 597 LDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
           L+QMV  PDA VWKALL+ACRVH +LELGE AA NLFELEPMN+MPYV LSNMYS AGKW
Sbjct: 302 LNQMVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKW 361

Query: 657 EDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA 716
           EDAAR+R+LM+SRGI KEPG SW+ETNS+V  F+SEDR HPLR +IYSKIDEI++LIKEA
Sbjct: 362 EDAARIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKEA 421

Query: 717 GYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAM 776
           GYVPDM+FALH+ ++E KE+GLAYHSEKLAVAFGLLT+PQGAPIRIFKNLRVCGDCHTAM
Sbjct: 422 GYVPDMSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCHTAM 481

Query: 777 KYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           KY S VY RHIILRDSN FHHF  G CSCGDYW
Sbjct: 482 KYTSKVYARHIILRDSNCFHHFTEGRCSCGDYW 514



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 171/331 (51%), Gaps = 11/331 (3%)

Query: 95  FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ 154
           F +  +W+SLI G    G + +A   F +M+    +  +YTL +VL   +   ++Q    
Sbjct: 3   FDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAIS 62

Query: 155 FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
            H   IKT F+    V   L+DMYAK   +  A  +F    D K+ V+WT+++TGYS NG
Sbjct: 63  VHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVD-KDVVSWTSLVTGYSHNG 121

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQS 274
              +AI+ F  MR+ GV  +Q    S+L+ACA ++  DFG Q+H  ++ SG E+++ V +
Sbjct: 122 SYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDN 181

Query: 275 ALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKI 334
           +L+ MYAKCG +  A R  +     + +SW ++IVG+A+ G  K +L  + +M A   K 
Sbjct: 182 SLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKP 241

Query: 335 DDFTYPSVLNCFASNIDLNNAKSVHSLI-----VKTGFEGYKFVNNALIDMYAKQGNLDC 389
           D  T+  +L   + N  L + ++    +     +K G E Y      +ID+  + G L  
Sbjct: 242 DYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYA----CMIDLLGRSGKLAE 297

Query: 390 AFMVFNLM-QDKDVISWTSLITGCAYHGSYE 419
           A  + N M    D + W +L+  C  H   E
Sbjct: 298 AKGLLNQMVVAPDAVVWKALLAACRVHKELE 328



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 168/317 (52%), Gaps = 2/317 (0%)

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           + V+W ++I G  + G+   A+  F+ MR   ++ +++T PS+L + A++        VH
Sbjct: 5   DEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVH 64

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
             I+ +GFEA   V +ALIDMYAK G LD A  +       + VSW S++ G++  G ++
Sbjct: 65  CLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYE 124

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           EA+ LF KM    +  D     SVL+  A    ++  + +H+ +VK+G E    V+N+L+
Sbjct: 125 EAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLV 184

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
            MYAK G++  A   F+ M  +DVISWT+LI G A +G  + +L+++  M  +G  PD++
Sbjct: 185 TMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYI 244

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LVLVYAKCGCINDANRVFDS 497
               +L AC+   +L  G+       K  G        + ++ +  + G + +A  + + 
Sbjct: 245 TFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQ 304

Query: 498 MHTR-DVITWTALIMGC 513
           M    D + W AL+  C
Sbjct: 305 MVVAPDAVVWKALLAAC 321



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 156/325 (48%), Gaps = 37/325 (11%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +I  YA  G+L  A  +F++   K+  +W+SL+ GYS+ G   EA +LF +M++ G  
Sbjct: 80  NALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVY 139

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P Q  + +VL  C+   ++  G+Q H   +K+  + +  V   LV MYAKC  I +A   
Sbjct: 140 PDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRA 199

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P  ++ ++WT +I GY+QNG G  +++ +  M   G + +  TF  +L AC+    
Sbjct: 200 FDNMPT-RDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACS---- 254

Query: 251 RDFGAQVHGCILSSG---FEANVYV---------QSALIDMYAKCGDLDSARRLLEYSEI 298
                  H  +L SG   FEA   V          + +ID+  + G L  A+ LL    +
Sbjct: 255 -------HNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMVV 307

Query: 299 -DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI----KIDDFTYPSVLNCFASNIDLN 353
             + V W +++   A    HKE L L  +M A+++     ++   Y  + N +++     
Sbjct: 308 APDAVVWKALL---AACRVHKE-LEL-GEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWE 362

Query: 354 NAKSVHSLIVKTGF---EGYKFVNN 375
           +A  +  L+   G     GY ++  
Sbjct: 363 DAARIRRLMRSRGICKEPGYSWIET 387



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 114/217 (52%), Gaps = 2/217 (0%)

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
           M+  D +SW SLI GC   G  E+AL +F  MR   +  D   + S+L++ A + V++  
Sbjct: 1   MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNA 60

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
             VH + +K+G  +   V+N+L+ +YAK G ++ A  VF  M  +DV++WT+L+ G + N
Sbjct: 61  ISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHN 120

Query: 517 GKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH 576
           G  +EA++ + +M   G  PD I    +L AC+   + +  +    ++ K  G++     
Sbjct: 121 GSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKS-GLESSLSV 179

Query: 577 YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
              ++ +  + G +++A    D M    D   W AL+
Sbjct: 180 DNSLVTMYAKCGSIVDANRAFDNMPTR-DVISWTALI 215



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 83/204 (40%), Gaps = 20/204 (9%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNET----PF 95
           N  +  ++  G I +A + F+ M  RD  +W  +I  YA +GR + + + +++       
Sbjct: 181 NSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTK 240

Query: 96  KNFFTWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ 154
            ++ T+  L++  S+ GL       F  M ++ G +P       ++ L    G L   + 
Sbjct: 241 PDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAK- 299

Query: 155 FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY-------LFKMFPDGKNHVAWTTMI 207
             G   +     +A V   L+   A C+   E E        LF++ P   N + +  + 
Sbjct: 300 --GLLNQMVVAPDAVVWKALL---AACRVHKELELGEMAAKNLFELEP--MNSMPYVMLS 352

Query: 208 TGYSQNGYGFKAIECFRDMRVEGV 231
             YS  G    A    R MR  G+
Sbjct: 353 NMYSAAGKWEDAARIRRLMRSRGI 376


>gi|255541480|ref|XP_002511804.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548984|gb|EEF50473.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 607

 Score =  786 bits (2030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/530 (70%), Positives = 433/530 (81%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N+ L D S SG IDEA  +F+K+ +RD F+WNTMIAAYANSGRL +AK+LF E P K+  
Sbjct: 26  NQQLNDLSKSGRIDEARHIFDKLPERDEFSWNTMIAAYANSGRLTDAKQLFCEAPLKSSI 85

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           TWSSLI G+  Y  DIEAFEL+ QMQ EG RP+ YTL ++LRLCS  G LQ+GE+ HGYA
Sbjct: 86  TWSSLISGFCKYEFDIEAFELYLQMQFEGQRPNHYTLGSILRLCSRTGFLQKGERIHGYA 145

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           IKT  D N FVVT LVD+YAKC+CI EAEY+F+M  D KNH  WT M+TGYS NG GF+A
Sbjct: 146 IKTRLDANVFVVTSLVDLYAKCECISEAEYIFEMVADSKNHATWTAMLTGYSHNGDGFRA 205

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           I+CFRDMR EGVESNQFTFPSILTAC AVS   FG QVHGCI+ SGF AN++VQSAL+DM
Sbjct: 206 IKCFRDMRAEGVESNQFTFPSILTACGAVSDHVFGVQVHGCIVRSGFGANIFVQSALVDM 265

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           YAKC DL+SA R+LE  E+++ VSWNSMIVG  R+GF  EALSLF +MHARDIKIDD+TY
Sbjct: 266 YAKCRDLNSANRVLENMEVNDVVSWNSMIVGCVREGFEAEALSLFNEMHARDIKIDDYTY 325

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
           PSVLN FAS  D+ +AKS H LI+KTGF  Y  VNNAL+DMYAKQGNLD AF VFN M D
Sbjct: 326 PSVLNSFASMKDIQSAKSAHCLIIKTGFGAYTLVNNALVDMYAKQGNLDYAFTVFNQMPD 385

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           KDV+SWTSL+TG +Y+GSYE+A+K F DMRI+G+CPD +V++S+LSACAELTV EFGQQV
Sbjct: 386 KDVVSWTSLVTGYSYNGSYEDAIKLFCDMRIAGVCPDQIVLASVLSACAELTVTEFGQQV 445

Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKG 519
           HA  LKSG CSSLS+DNSLV +YAKCG I DAN VFDSM  RDVI+WTALI+G AQNG+G
Sbjct: 446 HATILKSGLCSSLSIDNSLVTMYAKCGGIEDANYVFDSMQIRDVISWTALIVGYAQNGRG 505

Query: 520 KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG 569
           K++L FYDQM+A GTKPD+ITF+GLLFACSH GL E+ R YFESMDK YG
Sbjct: 506 KDSLHFYDQMIATGTKPDFITFIGLLFACSHTGLVEDGRRYFESMDKEYG 555



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 128/408 (31%), Positives = 216/408 (52%), Gaps = 2/408 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETP-FKNFFTWSSLIYGYSNYGLDIEAFELFW 122
           D + F   +++  YA    + EA+ +F      KN  TW++++ GYS+ G    A + F 
Sbjct: 151 DANVFVVTSLVDLYAKCECISEAEYIFEMVADSKNHATWTAMLTGYSHNGDGFRAIKCFR 210

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
            M+ EG   +Q+T  ++L  C        G Q HG  +++ F  N FV + LVDMYAKC+
Sbjct: 211 DMRAEGVESNQFTFPSILTACGAVSDHVFGVQVHGCIVRSGFGANIFVQSALVDMYAKCR 270

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            +  A  + +   +  + V+W +MI G  + G+  +A+  F +M    ++ + +T+PS+L
Sbjct: 271 DLNSANRVLENM-EVNDVVSWNSMIVGCVREGFEAEALSLFNEMHARDIKIDDYTYPSVL 329

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
            + A++         H  I+ +GF A   V +AL+DMYAK G+LD A  +       + V
Sbjct: 330 NSFASMKDIQSAKSAHCLIIKTGFGAYTLVNNALVDMYAKQGNLDYAFTVFNQMPDKDVV 389

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SW S++ G++  G +++A+ LF  M    +  D     SVL+  A        + VH+ I
Sbjct: 390 SWTSLVTGYSYNGSYEDAIKLFCDMRIAGVCPDQIVLASVLSACAELTVTEFGQQVHATI 449

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           +K+G      ++N+L+ MYAK G ++ A  VF+ MQ +DVISWT+LI G A +G  +++L
Sbjct: 450 LKSGLCSSLSIDNSLVTMYAKCGGIEDANYVFDSMQIRDVISWTALIVGYAQNGRGKDSL 509

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
            ++  M  +G  PD +    +L AC+   ++E G++      K  G S
Sbjct: 510 HFYDQMIATGTKPDFITFIGLLFACSHTGLVEDGRRYFESMDKEYGAS 557



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 138/307 (44%), Gaps = 58/307 (18%)

Query: 359 HSLIV--KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
           HS I+  +TGF      +N  ++  +K G +D A  +F+ + ++D  SW ++I   A  G
Sbjct: 8   HSYIIARQTGFSYSAIKSNQQLNDLSKSGRIDEARHIFDKLPERDEFSWNTMIAAYANSG 67

Query: 417 SYEEALKYFSDMR----------ISGIC---------------------PDHVVVSSILS 445
              +A + F +            ISG C                     P+H  + SIL 
Sbjct: 68  RLTDAKQLFCEAPLKSSITWSSLISGFCKYEFDIEAFELYLQMQFEGQRPNHYTLGSILR 127

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM-HTRDVI 504
            C+    L+ G+++H   +K+   +++ V  SLV +YAKC CI++A  +F+ +  +++  
Sbjct: 128 LCSRTGFLQKGERIHGYAIKTRLDANVFVVTSLVDLYAKCECISEAEYIFEMVADSKNHA 187

Query: 505 TWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESM 564
           TWTA++ G + NG G  A++ +  M A G + +  TF  +L AC                
Sbjct: 188 TWTAMLTGYSHNGDGFRAIKCFRDMRAEGVESNQFTFPSILTACGAVS------------ 235

Query: 565 DKVYGIKP---------GPDHY--ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
           D V+G++          G + +  + ++D+  +   L  A  +L+ M    D   W +++
Sbjct: 236 DHVFGVQVHGCIVRSGFGANIFVQSALVDMYAKCRDLNSANRVLENMEVN-DVVSWNSMI 294

Query: 614 SACRVHG 620
             C   G
Sbjct: 295 VGCVREG 301



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 13/152 (8%)

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           N+++  YA  G + DA ++F     +  ITW++LI G  +     EA + Y QM   G +
Sbjct: 57  NTMIAAYANSGRLTDAKQLFCEAPLKSSITWSSLISGFCKYEFDIEAFELYLQMQFEGQR 116

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPGPDH----YACMIDLLGRSGK 589
           P++ T   +L  CS  G       + +  ++++G  IK   D        ++DL  +   
Sbjct: 117 PNHYTLGSILRLCSRTG-------FLQKGERIHGYAIKTRLDANVFVVTSLVDLYAKCEC 169

Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHGD 621
           + EA+ + + +    +   W A+L+    +GD
Sbjct: 170 ISEAEYIFEMVADSKNHATWTAMLTGYSHNGD 201


>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
          Length = 440

 Score =  716 bits (1848), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/439 (74%), Positives = 387/439 (88%)

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
           + VNNAL+DMYAK G  D AF VF  M DKDVISWTSL+TGC ++GSYEEAL+ F +MRI
Sbjct: 2   ELVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRI 61

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
            GI PD +V++++LSACAELTVLEFG+QVHA FLKSG  SSLSVDNSLV +YAKCGCI D
Sbjct: 62  MGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIED 121

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           AN+VFDSM  +DVITWTALI+G AQNG+G+E+L FY+ M+A G KPD+ITF+GLLFACSH
Sbjct: 122 ANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSH 181

Query: 551 AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
           AGL E+ R YF+SM++VYGIKPGP+HYACMIDLLGRSGKL+EAK LL+QM  +PDATVWK
Sbjct: 182 AGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWK 241

Query: 611 ALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRG 670
           ALL+ACRVHG++ELGERAANNLFELEP NA+PYV LSN+YS AGKWE+AA+ R+LMK RG
Sbjct: 242 ALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRG 301

Query: 671 IRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVE 730
           + KEPGCSW+E +S+VH F+SEDR HP   +IYSK+DEIM+LIKEAGYVPDMNFALH+++
Sbjct: 302 VSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMD 361

Query: 731 EEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILR 790
           EEGKE+GLAYHSEKLAVAFGLLT+P GAPIRIFKNLR+CGDCHTAMKY+S V+ RH+ILR
Sbjct: 362 EEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILR 421

Query: 791 DSNRFHHFKAGNCSCGDYW 809
           DSN FHHF+ G CSC DYW
Sbjct: 422 DSNCFHHFREGACSCSDYW 440



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 138/257 (53%), Gaps = 11/257 (4%)

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
            V   LVDMYAK      A  +F+   D K+ ++WT+++TG   NG   +A+  F +MR+
Sbjct: 3   LVNNALVDMYAKXGYFDYAFDVFEKMTD-KDVISWTSLVTGCVHNGSYEEALRLFCEMRI 61

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
            G+  +Q    ++L+ACA ++  +FG QVH   L SG  +++ V ++L+ MYAKCG ++ 
Sbjct: 62  MGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIED 121

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
           A ++ +  EI + ++W ++IVG+A+ G  +E+L+ +  M A  +K D  T+  +L   + 
Sbjct: 122 ANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSH 181

Query: 349 NIDLNNAKSVHSLI-----VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDV 402
              + + +S    +     +K G E Y      +ID+  + G L  A  + N M    D 
Sbjct: 182 AGLVEHGRSYFQSMEEVYGIKPGPEHYA----CMIDLLGRSGKLMEAKELLNQMAVQPDA 237

Query: 403 ISWTSLITGCAYHGSYE 419
             W +L+  C  HG+ E
Sbjct: 238 TVWKALLAACRVHGNVE 254



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 131/251 (52%), Gaps = 8/251 (3%)

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD 331
           V +AL+DMYAK G  D A  + E     + +SW S++ G    G ++EAL LF +M    
Sbjct: 4   VNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMG 63

Query: 332 IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
           I  D     +VL+  A    L   K VH+  +K+G      V+N+L+ MYAK G ++ A 
Sbjct: 64  IHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDAN 123

Query: 392 MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELT 451
            VF+ M+ +DVI+WT+LI G A +G   E+L +++BM  SG+ PD +    +L AC+   
Sbjct: 124 KVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAG 183

Query: 452 VLEFG----QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITW 506
           ++E G    Q +  V+    G    +    ++ +  + G + +A  + + M  + D   W
Sbjct: 184 LVEHGRSYFQSMEEVYGIKPGPEHYAC---MIDLLGRSGKLMEAKELLNQMAVQPDATVW 240

Query: 507 TALIMGCAQNG 517
            AL+  C  +G
Sbjct: 241 KALLAACRVHG 251



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 119/247 (48%), Gaps = 3/247 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++  YA  G    A  +F +   K+  +W+SL+ G  + G   EA  LF +M++ G  
Sbjct: 6   NALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIH 65

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P Q  +  VL  C+   +L+ G+Q H   +K+    +  V   LV MYAKC CI +A  +
Sbjct: 66  PDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKV 125

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F    + ++ + WT +I GY+QNG G +++  + BM   GV+ +  TF  +L AC+    
Sbjct: 126 FDSM-EIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSHAGL 184

Query: 251 RDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMI 308
            + G      +    G +      + +ID+  + G L  A+ LL    +  + + W +++
Sbjct: 185 VEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALL 244

Query: 309 VGFARQG 315
                 G
Sbjct: 245 AACRVHG 251



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 18/197 (9%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK----NFFTW 101
           ++  G I++A ++F+ M  +D  TW  +I  YA +GR RE+   +N+        +F T+
Sbjct: 113 YAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITF 172

Query: 102 SSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQYTLDNVLRLCSLKG-LLQRGEQFHGYA 159
             L++  S+ GL       F  M ++ G +P       ++ L    G L++  E  +  A
Sbjct: 173 IGLLFACSHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMA 232

Query: 160 IK---TCFD--LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
           ++   T +   L A  V G V++  +      A  LF++ P  KN V +  +   YS  G
Sbjct: 233 VQPDATVWKALLAACRVHGNVELGERA-----ANNLFELEP--KNAVPYVLLSNLYSAAG 285

Query: 215 YGFKAIECFRDMRVEGV 231
              +A +  R M++ GV
Sbjct: 286 KWEEAAKTRRLMKLRGV 302


>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  645 bits (1664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/732 (42%), Positives = 452/732 (61%), Gaps = 7/732 (0%)

Query: 84  REAKKLFNETPF------KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLD 137
           RE     N+T F       N   W   I GY   G   +A  L++QMQ  G  P +    
Sbjct: 65  REVSACANQTQFTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFL 124

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           +V++ C  +  LQ G + H   I   F+ +  V T L  MY KC  +  A  +F   P  
Sbjct: 125 SVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPK- 183

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           ++ V+W  +I GYSQNG  ++A+  F +M+V G++ N  T  S++  CA + A + G Q+
Sbjct: 184 RDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQI 243

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           H   + SG E++V V + L++MYAKCG++++A +L E   I +  SWN++I G++    H
Sbjct: 244 HCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQH 303

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
            EAL+ F +M  R IK +  T  SVL   A    L   + +H   +++GFE    V NAL
Sbjct: 304 HEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNAL 363

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           ++MYAK GN++ A+ +F  M  K+V++W ++I+G + HG   EAL  F +M+  GI PD 
Sbjct: 364 VNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDS 423

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
             + S+L ACA    LE G+Q+H   ++SG  S++ V   LV +YAKCG +N A ++F+ 
Sbjct: 424 FAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFER 483

Query: 498 MHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENA 557
           M  +DV++WT +I+    +G G++AL  + +M   GTK D+I F  +L ACSHAGL +  
Sbjct: 484 MPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQG 543

Query: 558 RWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACR 617
             YF+ M   YG+ P  +HYAC++DLLGR+G L EA  ++  M  EPDA VW ALL ACR
Sbjct: 544 LQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACR 603

Query: 618 VHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGC 677
           +H ++ELGE+AA +LFEL+P NA  YV LSN+Y+ A +WED A++RK+MK +G++K+PGC
Sbjct: 604 IHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGC 663

Query: 678 SWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIG 737
           S V  +  V  F+  DR HP    IY+ ++ +   +++AGYVP+ N AL +VEEE KE  
Sbjct: 664 SVVAVHRDVQTFLVGDRTHPQSEQIYAMLEILYEQMRKAGYVPNTNLALQDVEEEAKENI 723

Query: 738 LAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHH 797
           L+ HSEKLA++FG++    G PIRI KNLRVC DCH A K+IS +  R II+RD+NRFHH
Sbjct: 724 LSSHSEKLAISFGIINTSPGIPIRIMKNLRVCSDCHNATKFISKIVGREIIVRDANRFHH 783

Query: 798 FKAGNCSCGDYW 809
            K G CSCGDYW
Sbjct: 784 VKNGFCSCGDYW 795



 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 164/453 (36%), Positives = 261/453 (57%), Gaps = 5/453 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           + D      + + Y   G L  A+++F+  P ++  +W+++I GYS  G   EA  LF +
Sbjct: 152 ESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSE 211

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           MQ+ G +P+  TL +V+ +C+    L++G+Q H YAI++  + +  VV GLV+MYAKC  
Sbjct: 212 MQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGN 271

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +  A  LF+  P  ++  +W  +I GYS N    +A+  F  M+V G++ N  T  S+L 
Sbjct: 272 VNTAHKLFERMPI-RDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLP 330

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           ACA + A + G Q+HG  + SGFE+N  V +AL++MYAKCG+++SA +L E     N V+
Sbjct: 331 ACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVA 390

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN++I G+++ G   EAL+LF +M A+ IK D F   SVL   A  + L   K +H   +
Sbjct: 391 WNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTI 450

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           ++GFE    V   L+D+YAK GN++ A  +F  M ++DV+SWT++I     HG  E+AL 
Sbjct: 451 RSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALA 510

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS--GGCSSLSVDNSLVLV 481
            FS M+ +G   DH+  ++IL+AC+   +++ G Q     +KS  G    L     LV +
Sbjct: 511 LFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQC-MKSDYGLAPKLEHYACLVDL 569

Query: 482 YAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
             + G +++AN +  +M    D   W AL+  C
Sbjct: 570 LGRAGHLDEANGIIKNMSLEPDANVWGALLGAC 602



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 89/262 (33%), Positives = 142/262 (54%), Gaps = 8/262 (3%)

Query: 54  EAGQLFEKMSDRDGF-----TWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY 108
           E GQ     + R GF       N ++  YA  G +  A KLF   P KN   W+++I GY
Sbjct: 339 EQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGY 398

Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA 168
           S +G   EA  LF +MQ +G +P  + + +VL  C+    L++G+Q HGY I++ F+ N 
Sbjct: 399 SQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNV 458

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
            V TGLVD+YAKC  +  A+ LF+  P+ ++ V+WTTMI  Y  +G+G  A+  F  M+ 
Sbjct: 459 VVGTGLVDIYAKCGNVNTAQKLFERMPE-QDVVSWTTMILAYGIHGHGEDALALFSKMQE 517

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLD 287
            G + +   F +ILTAC+     D G Q   C+ S  G    +   + L+D+  + G LD
Sbjct: 518 TGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLD 577

Query: 288 SARRLLEYSEIDNEVS-WNSMI 308
            A  +++   ++ + + W +++
Sbjct: 578 EANGIIKNMSLEPDANVWGALL 599



 Score = 47.0 bits (110), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 15/182 (8%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN---ETPFK- 96
            LVD ++  G ++ A +LFE+M ++D  +W TMI AY   G   +A  LF+   ET  K 
Sbjct: 463 GLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKL 522

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
           +   +++++   S+ GL  +  + F  M+ + G  P    L++   L  L G     ++ 
Sbjct: 523 DHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPK---LEHYACLVDLLGRAGHLDEA 579

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE-----AEYLFKMFPDGKNHVAWTTMITGY 210
           +G       + +A V   L+    +  C  E     A++LF++ PD   +    + I   
Sbjct: 580 NGIIKNMSLEPDANVWGALLGA-CRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAE 638

Query: 211 SQ 212
           +Q
Sbjct: 639 AQ 640


>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  639 bits (1648), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 322/744 (43%), Positives = 471/744 (63%), Gaps = 1/744 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  NT++  YA      ++K+LF+E P +N  +W++L   Y       EA  LF++M 
Sbjct: 191 DVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMV 250

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           L G +P++++L +++  C+      RG+  HGY IK  +D + F    LVDMYAK   + 
Sbjct: 251 LSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLA 310

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A  +F+      + V+W  +I G   + +  +A+E    M+  G+  N FT  S L AC
Sbjct: 311 DAISVFEKIKQ-PDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKAC 369

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A +  ++ G Q+H  ++    E++++V   L+DMY+KC  L+ AR         + ++WN
Sbjct: 370 AGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWN 429

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           ++I G+++     EALSLF +MH   I  +  T  ++L   A    ++  + VH L VK+
Sbjct: 430 AIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKS 489

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           GF    +V N+LID Y K  +++ A  +F      D++S+TS+IT  A +G  EEALK F
Sbjct: 490 GFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLF 549

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
            +M+   + PD  V SS+L+ACA L+  E G+Q+H   LK G    +   NSLV +YAKC
Sbjct: 550 LEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKC 609

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G I+DA R F  +  R +++W+A+I G AQ+G G++ALQ ++QML  G  P++IT V +L
Sbjct: 610 GSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVL 669

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
            AC+HAGL   A+ YFESM++++G KP  +HYACMIDLLGR+GK+ EA  L+++M  E +
Sbjct: 670 GACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEAN 729

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
           A+VW ALL A R+H D+ELG RAA  LF LEP  +  +V L+N+Y++AGKWE+ A VR+L
Sbjct: 730 ASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRL 789

Query: 666 MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFA 725
           M+   ++KEPG SW+E   +V+ F+  DR H    +IY+K+DE+  L+ +AGYVP +   
Sbjct: 790 MRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEID 849

Query: 726 LHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLR 785
           LH+VE+  KE+ L +HSEKLAVAFGL+  PQGAPIR+ KNLRVC DCHTA KYI  +  R
Sbjct: 850 LHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSR 909

Query: 786 HIILRDSNRFHHFKAGNCSCGDYW 809
            II+RD NRFHHFK G+CSCGDYW
Sbjct: 910 EIIVRDINRFHHFKDGSCSCGDYW 933



 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 192/633 (30%), Positives = 318/633 (50%), Gaps = 40/633 (6%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +I  Y+       A+KL +E+   +  +WS+LI GY+  GL   A   F +M L G +
Sbjct: 95  NHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVK 154

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            +++T  +VL+ CS+   L+ G+Q HG  + + F+ + FV   LV MYAKC    +++ L
Sbjct: 155 CNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRL 214

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P+ +N V+W  + + Y Q  +  +A+  F +M + G++ N+F+  S++ AC  +  
Sbjct: 215 FDEIPE-RNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRD 273

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              G  +HG ++  G++ + +  +AL+DMYAK GDL  A  + E  +  + VSWN++I G
Sbjct: 274 SSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAG 333

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
                 H++AL L  +M    I  + FT  S L   A        + +HS ++K   E  
Sbjct: 334 CVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESD 393

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
            FV+  L+DMY+K   L+ A M FNL+ +KD+I+W ++I+G + +    EAL  F +M  
Sbjct: 394 LFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHK 453

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
            GI  +   +S+IL + A L V+   +QVH + +KSG  S + V NSL+  Y KC  + D
Sbjct: 454 EGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVED 513

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           A R+F+     D++++T++I   AQ G+G+EAL+ + +M     KPD      LL AC++
Sbjct: 514 AERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACAN 573

Query: 551 AGLAENARWYFESMDKVYGI-------------------------------KPGPDHYAC 579
               E  +     + K YG                                + G   ++ 
Sbjct: 574 LSAFEQGKQLHVHILK-YGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSA 632

Query: 580 MIDLLGRSGKLIEAKALLDQMVGE---PDATVWKALLSACRVHG---DLELGERAANNLF 633
           MI  L + G   +A  L +QM+ E   P+     ++L AC   G   + +L   +   LF
Sbjct: 633 MIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELF 692

Query: 634 ELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
             +PM    Y  + ++   AGK  +A  +   M
Sbjct: 693 GFKPMQEH-YACMIDLLGRAGKINEAVELVNKM 724



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 179/612 (29%), Positives = 297/612 (48%), Gaps = 38/612 (6%)

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE 153
           PFK       LI     +  D +   +   +    + P+  +   +L  C     L+ G 
Sbjct: 20  PFK---PAPKLIQTVPQFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGL 76

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQN 213
           Q H +  K+    +  +   L+++Y+KC+    A  L     +  + V+W+ +I+GY+QN
Sbjct: 77  QIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSE-PDLVSWSALISGYAQN 135

Query: 214 GYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
           G G  A+  F +M + GV+ N+FTF S+L AC+ V     G QVHG ++ SGFE +V+V 
Sbjct: 136 GLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVA 195

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
           + L+ MYAKC +   ++RL +     N VSWN++   + +  F  EA+ LF +M    IK
Sbjct: 196 NTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIK 255

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
            ++F+  S++N      D +  K +H  ++K G++   F  NAL+DMYAK G+L  A  V
Sbjct: 256 PNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISV 315

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           F  ++  D++SW ++I GC  H  +E+AL+    M+ SGICP+   +SS L ACA + + 
Sbjct: 316 FEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLK 375

Query: 454 EFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC 513
           E G+Q+H+  +K    S L V   LV +Y+KC  + DA   F+ +  +D+I W A+I G 
Sbjct: 376 ELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGY 435

Query: 514 AQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW-------------- 559
           +Q  +  EAL  + +M   G   +  T   +L + +   +    R               
Sbjct: 436 SQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDI 495

Query: 560 --------------YFESMDKVYGIKPGPD--HYACMIDLLGRSGKLIEAKAL---LDQM 600
                         + E  ++++      D   +  MI    + G+  EA  L   +  M
Sbjct: 496 YVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDM 555

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELE-PMNAMPYVQLSNMYSTAGKWEDA 659
             +PD  V  +LL+AC      E G++   ++ +    ++      L NMY+  G  +DA
Sbjct: 556 ELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDA 615

Query: 660 ARVRKLMKSRGI 671
            R    +  RGI
Sbjct: 616 GRAFSELTERGI 627



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 138/392 (35%), Positives = 221/392 (56%), Gaps = 1/392 (0%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G L +   D D F+ N ++  YA  G L +A  +F +    +  +W+++I G   +    
Sbjct: 282 GYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHE 341

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           +A EL  QM+  G  P+ +TL + L+ C+  GL + G Q H   +K   + + FV  GLV
Sbjct: 342 QALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLV 401

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMY+KC  + +A   F + P+ K+ +AW  +I+GYSQ     +A+  F +M  EG+  NQ
Sbjct: 402 DMYSKCDLLEDARMAFNLLPE-KDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQ 460

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            T  +IL + A +       QVHG  + SGF +++YV ++LID Y KC  ++ A R+ E 
Sbjct: 461 TTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEE 520

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
             I + VS+ SMI  +A+ G  +EAL LF +M   ++K D F   S+LN  A+       
Sbjct: 521 CTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQG 580

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           K +H  I+K GF    F  N+L++MYAK G++D A   F+ + ++ ++SW+++I G A H
Sbjct: 581 KQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQH 640

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSAC 447
           G   +AL+ F+ M   G+ P+H+ + S+L AC
Sbjct: 641 GHGRQALQLFNQMLKEGVSPNHITLVSVLGAC 672



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 5/93 (5%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN----ETPFKNFFTW 101
           ++  G ID+AG+ F ++++R   +W+ MI   A  G  R+A +LFN    E    N  T 
Sbjct: 606 YAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITL 665

Query: 102 SSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQ 133
            S++   ++ GL  EA   F  M +L G++P Q
Sbjct: 666 VSVLGACNHAGLVTEAKLYFESMEELFGFKPMQ 698


>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  637 bits (1643), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 310/739 (41%), Positives = 468/739 (63%), Gaps = 1/739 (0%)

Query: 71   NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
            N ++  YA  G + EA+++F++   K+  +W+ +I GY++ G    AFE+F +MQ EG  
Sbjct: 283  NCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVV 342

Query: 131  PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            P++ T  NVL   S    L+ G+  H + +    + +  V T LV MYAKC    +   +
Sbjct: 343  PNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQV 402

Query: 191  FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
            F+   + ++ +AW TMI G ++ G   +A E +  M+ EG+  N+ T+  +L AC   +A
Sbjct: 403  FEKLVN-RDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTA 461

Query: 251  RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              +G ++H  ++  GF  ++ VQ+ALI MYA+CG +  AR L       + +SW +MI G
Sbjct: 462  LHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGG 521

Query: 311  FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
             A+ G   EAL++F+ M    +K +  TY S+LN  +S   L+  + +H  +++ G    
Sbjct: 522  LAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATD 581

Query: 371  KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
              V N L++MY+  G++  A  VF+ M  +D++++ ++I G A H   +EALK F  ++ 
Sbjct: 582  AHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQE 641

Query: 431  SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
             G+ PD V   ++L+ACA    LE+ +++H++ LK G  S  S+ N+LV  YAKCG  +D
Sbjct: 642  EGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSD 701

Query: 491  ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
            A  VFD M  R+VI+W A+I GCAQ+G+G++ LQ +++M   G KPD +TFV LL ACSH
Sbjct: 702  ALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSH 761

Query: 551  AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
            AGL E  R YF SM + +GI P  +HY CM+DLLGR+G+L E +AL+  M  + +  +W 
Sbjct: 762  AGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWG 821

Query: 611  ALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRG 670
            ALL ACR+HG++ + ERAA +  +L+P NA  YV LS+MY+ AG W+ AA++RKLM+ RG
Sbjct: 822  ALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRG 881

Query: 671  IRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVE 730
            + KEPG SW+E   ++H F++EDR HP    IY+++D++   +K  GYVPD    +H+V+
Sbjct: 882  VTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKMEGYVPDTRSVMHDVD 941

Query: 731  EEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILR 790
            E  KE  + +HSE+LA+A+GL++   G PIRIFKNLRVC DCHTA K+I+ +  R I+ R
Sbjct: 942  EGEKENAVCHHSERLAIAYGLISTLPGTPIRIFKNLRVCPDCHTATKFITKIVDREIVAR 1001

Query: 791  DSNRFHHFKAGNCSCGDYW 809
            D NRFHHFK G CSCGDYW
Sbjct: 1002 DVNRFHHFKDGVCSCGDYW 1020



 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 197/602 (32%), Positives = 330/602 (54%), Gaps = 12/602 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPF--KNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D +T N +I  Y   G + EA++++N+     +   +W++++ GY  YG   EA +L  +
Sbjct: 175 DQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLRE 234

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           MQ  G    + T   +L  C     L+ G + H  A+K     +  V   +++MYAKC  
Sbjct: 235 MQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGS 294

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I EA  +F    + K+ V+WT +I GY+  G+   A E F+ M+ EGV  N+ T+ ++L 
Sbjct: 295 IHEAREVFDKM-ETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLN 353

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           A +  +A  +G  VH  IL++G E+++ V +AL+ MYAKCG     R++ E     + ++
Sbjct: 354 AFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIA 413

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN+MI G A  G  +EA  ++ +M    +  +  TY  +LN   +   L+  + +HS +V
Sbjct: 414 WNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVV 473

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K GF     V NALI MYA+ G++  A ++FN M  KD+ISWT++I G A  G   EAL 
Sbjct: 474 KDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALA 533

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            F DM+ +G+ P+ V  +SIL+AC+    L++G+++H   +++G  +   V N+LV +Y+
Sbjct: 534 VFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYS 593

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
            CG + DA +VFD M  RD++ + A+I G A +  GKEAL+ +D++   G KPD +T++ 
Sbjct: 594 MCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYIN 653

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           +L AC+++G  E A+    S+    G          ++    + G   +A  + D+M+ +
Sbjct: 654 MLNACANSGSLEWAK-EIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMM-K 711

Query: 604 PDATVWKALLSACRVHGD----LELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDA 659
            +   W A++  C  HG     L+L ER    +  ++P + + +V L +  S AG  E+ 
Sbjct: 712 RNVISWNAIIGGCAQHGRGQDVLQLFERM--KMEGIKP-DIVTFVSLLSACSHAGLLEEG 768

Query: 660 AR 661
            R
Sbjct: 769 RR 770



 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 163/559 (29%), Positives = 288/559 (51%), Gaps = 10/559 (1%)

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
           A ++   +Q +G R +      +L+ C     L  G + H + I+ C  L+ + V  L++
Sbjct: 125 AMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALIN 184

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHV-AWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           MY +C  I EA  ++      +  V +W  M+ GY Q GY  +A++  R+M+  G+   +
Sbjct: 185 MYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGR 244

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            T   +L++C + SA + G ++H   + +    +V V + +++MYAKCG +  AR + + 
Sbjct: 245 ATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDK 304

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
            E  + VSW  +I G+A  G  + A  +F+KM    +  +  TY +VLN F+    L   
Sbjct: 305 METKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWG 364

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           K+VHS I+  G E    V  AL+ MYAK G+      VF  + ++D+I+W ++I G A  
Sbjct: 365 KTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEG 424

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G++EEA + +  M+  G+ P+ +    +L+AC   T L +G+++H+  +K G    +SV 
Sbjct: 425 GNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQ 484

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           N+L+ +YA+CG I DA  +F+ M  +D+I+WTA+I G A++G G EAL  +  M   G K
Sbjct: 485 NALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLK 544

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           P+ +T+  +L ACS     +  R   + + +  G+         ++++    G + +A+ 
Sbjct: 545 PNRVTYTSILNACSSPAALDWGRRIHQQVIEA-GLATDAHVANTLVNMYSMCGSVKDARQ 603

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP----YVQLSNMYS 651
           + D+M  + D   + A++     H    LG+ A      L+     P    Y+ + N  +
Sbjct: 604 VFDRMT-QRDIVAYNAMIGGYAAHN---LGKEALKLFDRLQEEGLKPDKVTYINMLNACA 659

Query: 652 TAGKWEDAARVRKLMKSRG 670
            +G  E A  +  L+   G
Sbjct: 660 NSGSLEWAKEIHSLVLKDG 678



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 150/475 (31%), Positives = 251/475 (52%), Gaps = 36/475 (7%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++  G   +  Q+FEK+ +RD   WNTMI   A  G                   W    
Sbjct: 390 YAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGG------------------NWE--- 428

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                     EA E++ QMQ EG  P++ T   +L  C     L  G + H   +K  F 
Sbjct: 429 ----------EASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFM 478

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLF-KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
            +  V   L+ MYA+C  I +A  LF KM    K+ ++WT MI G +++G G +A+  F+
Sbjct: 479 FDISVQNALISMYARCGSIKDARLLFNKMVR--KDIISWTAMIGGLAKSGLGAEALAVFQ 536

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
           DM+  G++ N+ T+ SIL AC++ +A D+G ++H  ++ +G   + +V + L++MY+ CG
Sbjct: 537 DMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCG 596

Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
            +  AR++ +     + V++N+MI G+A     KEAL LF ++    +K D  TY ++LN
Sbjct: 597 SVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLN 656

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
             A++  L  AK +HSL++K G+     + NAL+  YAK G+   A +VF+ M  ++VIS
Sbjct: 657 ACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVIS 716

Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
           W ++I GCA HG  ++ L+ F  M++ GI PD V   S+LSAC+   +LE G++      
Sbjct: 717 WNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMS 776

Query: 465 KSGGCS-SLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNG 517
           +  G + ++     +V +  + G +++   +  +M  + +   W AL+  C  +G
Sbjct: 777 RDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHG 831



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 144/496 (29%), Positives = 235/496 (47%), Gaps = 48/496 (9%)

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           +A++  + ++ +G   N   +  +L  C  V     G +VH  I+      + Y  +ALI
Sbjct: 124 RAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALI 183

Query: 278 DMYAKCGDLDSARRL---LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKI 334
           +MY +CG ++ AR++   L ++E     SWN+M+VG+ + G+ +EAL L ++M    + +
Sbjct: 184 NMYIQCGSIEEARQVWNKLNHTERTVH-SWNAMVVGYVQYGYIEEALKLLREMQQHGLAL 242

Query: 335 DDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVF 394
              T   +L+   S   L   + +H   +K        V N +++MYAK G++  A  VF
Sbjct: 243 GRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVF 302

Query: 395 NLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLE 454
           + M+ K V+SWT +I G A  G  E A + F  M+  G+ P+ +   ++L+A +    L+
Sbjct: 303 DKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALK 362

Query: 455 FGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCA 514
           +G+ VH+  L +G  S L+V  +LV +YAKCG   D  +VF+ +  RD+I W  +I G A
Sbjct: 363 WGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLA 422

Query: 515 QNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC-------------------------- 548
           + G  +EA + Y QM   G  P+ IT+V LL AC                          
Sbjct: 423 EGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDIS 482

Query: 549 ---------SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ 599
                    +  G  ++AR  F  M     ++     +  MI  L +SG   EA A+   
Sbjct: 483 VQNALISMYARCGSIKDARLLFNKM-----VRKDIISWTAMIGGLAKSGLGAEALAVFQD 537

Query: 600 MVG---EPDATVWKALLSACRVHGDLELGERAANNLFELE-PMNAMPYVQLSNMYSTAGK 655
           M     +P+   + ++L+AC     L+ G R    + E     +A     L NMYS  G 
Sbjct: 538 MQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGS 597

Query: 656 WEDAARVRKLMKSRGI 671
            +DA +V   M  R I
Sbjct: 598 VKDARQVFDRMTQRDI 613


>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
 gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score =  629 bits (1621), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 319/746 (42%), Positives = 467/746 (62%), Gaps = 1/746 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D F  N+++  YA  G   +A+ LF+  P ++  +W++L   Y +  +  EA  LF  
Sbjct: 42  DSDEFVANSLVILYAKCGGFGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHD 101

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M L G RP++++L +++ +C+      +G + HGY IK  +D +AF    LVDMYAK   
Sbjct: 102 MVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGI 161

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A  +F       + V+W  +I G   + Y  +A+E  R+M   G+  N FT  S L 
Sbjct: 162 LEDASSVFDEIAK-PDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALK 220

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           ACA ++ R+ G Q+H  ++     ++ ++   LIDMY+KC  +D AR + +     + ++
Sbjct: 221 ACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIA 280

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN++I G ++    +EA SLF  MH   I  +  T  +VL   A+       + +H+L +
Sbjct: 281 WNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSL 340

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K+GFE   +V N+LID Y K G+++ A  VF      D++ +TSL+T  A  G  EEAL+
Sbjct: 341 KSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALR 400

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            + +M+  GI PD  V SS+L+ACA L+  E G+QVH   LK G  S +   NSLV +YA
Sbjct: 401 LYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYA 460

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG I DA+  F  +  R +++W+A+I G AQ+G GKEALQ + QML  G  P++IT V 
Sbjct: 461 KCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVS 520

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           +L AC+HAGL   A+ YF SM  ++GI+P  +HYACMIDLLGR+GKL  A  L+++M  +
Sbjct: 521 VLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQ 580

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
            +A VW ALL A R+H +++LGE+AA  L  LEP  +  +V L+N+Y++ G W+  ARVR
Sbjct: 581 ANALVWGALLGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVR 640

Query: 664 KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMN 723
           +LMK   ++KEPG SW+E   +V+ FI  DR H   T+IY+K+DE+  L+K+AGYVP + 
Sbjct: 641 RLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYAKLDELSDLLKKAGYVPMVE 700

Query: 724 FALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVY 783
             LH+VE   KE  L +HSEKLAVAFGL+  P GAPIR+ KNLR+C DCHT +K+IS + 
Sbjct: 701 IDLHDVERSEKEQLLYHHSEKLAVAFGLIATPPGAPIRVKKNLRICFDCHTVLKFISKIV 760

Query: 784 LRHIILRDSNRFHHFKAGNCSCGDYW 809
            R II+RD+NRFHHF+ G+CSCG+YW
Sbjct: 761 SREIIVRDTNRFHHFREGSCSCGEYW 786



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 174/579 (30%), Positives = 282/579 (48%), Gaps = 38/579 (6%)

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M L G + +++   +VL+ C++   L  G+Q HG  + T FD + FV   LV +YAKC  
Sbjct: 1   MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
             +A  LF   PD ++ V+W  + + Y  +    +A+  F DM + G+  N+F+  S++ 
Sbjct: 61  FGDARSLFDAIPD-RSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMIN 119

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
            C  +     G ++HG ++  G++++ +  +AL+DMYAK G L+ A  + +     + VS
Sbjct: 120 VCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVS 179

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN++I G     +H  AL L ++M+   +  + FT  S L   A        + +HS ++
Sbjct: 180 WNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLI 239

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K       F+   LIDMY+K  ++D A +VF LM ++D+I+W ++I+G + +   EEA  
Sbjct: 240 KMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAAS 299

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            F  M   GI  +   +S++L + A L      +Q+HA+ LKSG      V NSL+  Y 
Sbjct: 300 LFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYG 359

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG + DA RVF+     D++ +T+L+   AQ+G+G+EAL+ Y +M  RG KPD      
Sbjct: 360 KCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSS 419

Query: 544 LLFACSHAGLAENARWY------FESMDKVYGIKPGPDHYA------------------- 578
           LL AC+     E  +        F  M  ++      + YA                   
Sbjct: 420 LLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRG 479

Query: 579 -----CMIDLLGRSGKLIEAKALLDQMVG---EPDATVWKALLSACRVHGDLELGERAAN 630
                 MI  L + G   EA  L  QM+     P+     ++L AC   G +   +   N
Sbjct: 480 IVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFN 539

Query: 631 N---LFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
           +   LF +EPM    Y  + ++   AGK E A  +   M
Sbjct: 540 SMKILFGIEPMQE-HYACMIDLLGRAGKLEAAMELVNKM 577



 Score =  255 bits (651), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 139/392 (35%), Positives = 220/392 (56%), Gaps = 1/392 (0%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G L +   D D F+ N ++  YA  G L +A  +F+E    +  +W+++I G   +    
Sbjct: 135 GYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHH 194

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
            A EL  +M   G  P+ +TL + L+ C+   L + G Q H   IK     ++F+  GL+
Sbjct: 195 RALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLI 254

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMY+KC  + +A  +FK+ P+ ++ +AW  +I+G+SQN    +A   F  M  EG+  NQ
Sbjct: 255 DMYSKCNSMDDARLVFKLMPE-RDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQ 313

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            T  ++L + AA+ A     Q+H   L SGFE + YV ++LID Y KCG ++ A R+ E 
Sbjct: 314 TTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEE 373

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
           S I + V + S++  +A+ G  +EAL L+ +M  R IK D F   S+LN  AS       
Sbjct: 374 SPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQG 433

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           K VH  I+K GF    F  N+L++MYAK G+++ A   F+ +  + ++SW+++I G A H
Sbjct: 434 KQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQH 493

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSAC 447
           G  +EAL+ F  M   G+ P+H+ + S+L AC
Sbjct: 494 GYGKEALQLFKQMLKVGVPPNHITLVSVLCAC 525


>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 902

 Score =  628 bits (1620), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 311/756 (41%), Positives = 473/756 (62%), Gaps = 7/756 (0%)

Query: 54  EAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGL 113
           +AG LF      D    N ++  YA  G + EA+++F++   K+  +W+  I GY++ G 
Sbjct: 154 QAGLLF------DVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGR 207

Query: 114 DIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG 173
              AFE+F +M+ EG  P++ T  +VL   S    L+ G+  H   +    + +  V T 
Sbjct: 208 SETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTA 267

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
           LV MYAKC    +   +F+   + ++ +AW TMI G ++ GY  +A E +  M+ EGV  
Sbjct: 268 LVKMYAKCGSYKDCRQVFEKLVN-RDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMP 326

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
           N+ T+  +L AC   +A  +G ++H  +  +GF +++ VQ+ALI MY++CG +  AR + 
Sbjct: 327 NKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVF 386

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
           +     + +SW +MI G A+ GF  EAL+++++M    ++ +  TY S+LN  +S   L 
Sbjct: 387 DKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALE 446

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
             + +H  +V+ G      V N L++MY+  G++  A  VF+ M  +D++++ ++I G A
Sbjct: 447 WGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYA 506

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
            H   +EALK F  ++  G+ PD V   ++L+ACA    LE+ +++H +  K G  S  S
Sbjct: 507 AHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTS 566

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
           V N+LV  YAKCG  +DA+ VF+ M  R+VI+W A+I G AQ+G+G++ALQ +++M   G
Sbjct: 567 VGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEG 626

Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
            KPD +TFV LL ACSHAGL E  R YF SM + + I P  +HY CM+DLLGR+G+L EA
Sbjct: 627 VKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEA 686

Query: 594 KALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTA 653
           +AL+  M  + +  +W ALL ACR+HG++ + ERAA +  +L+  NA+ YV LS+MY+ A
Sbjct: 687 EALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAA 746

Query: 654 GKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLI 713
           G W+ AA++RKLM+ RG+ KEPG SW++   ++H F++EDR HP    IY+++D +   +
Sbjct: 747 GMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAM 806

Query: 714 KEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCH 773
           K  GYVPD    +H+V+E  KE  + +HSE+LA+A+GL++ P G  I IFKNLRVC DCH
Sbjct: 807 KMKGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTPPGTRIHIFKNLRVCPDCH 866

Query: 774 TAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           TA K+IS +  R II RD NRFHHFK G CSCGDYW
Sbjct: 867 TATKFISKIVDREIIARDVNRFHHFKDGVCSCGDYW 902



 Score =  335 bits (858), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 195/602 (32%), Positives = 330/602 (54%), Gaps = 12/602 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPF--KNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D +T N +I  Y   G + EA++++ +  +  +   +W++++ GY  YG   +A +L  Q
Sbjct: 57  DQYTVNALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQ 116

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           MQ  G  P + T+ + L  C   G L+ G + H  A++     +  V   +++MYAKC  
Sbjct: 117 MQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGS 176

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I EA  +F    + K+ V+WT  I GY+  G    A E F+ M  EGV  N+ T+ S+L 
Sbjct: 177 IEEAREVFDKM-EKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLN 235

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           A ++ +A  +G  VH  IL++G E++  V +AL+ MYAKCG     R++ E     + ++
Sbjct: 236 AFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIA 295

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN+MI G A  G+ +EA  ++ +M    +  +  TY  +LN   ++  L+  K +HS + 
Sbjct: 296 WNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVA 355

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K GF     V NALI MY++ G++  A +VF+ M  KDVISWT++I G A  G   EAL 
Sbjct: 356 KAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALT 415

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            + +M+ +G+ P+ V  +SIL+AC+    LE+G+++H   +++G  +   V N+LV +Y+
Sbjct: 416 VYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYS 475

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
            CG + DA +VFD M  RD++ + A+I G A +  GKEAL+ +D++   G KPD +T++ 
Sbjct: 476 MCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYIN 535

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           +L AC+++G  E AR    ++ +  G          ++    + G   +A  + ++M  +
Sbjct: 536 MLNACANSGSLEWAR-EIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMT-K 593

Query: 604 PDATVWKALLSACRVHGD----LELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDA 659
            +   W A++     HG     L+L ER    +  ++P + + +V L +  S AG  E+ 
Sbjct: 594 RNVISWNAIIGGSAQHGRGQDALQLFERM--KMEGVKP-DIVTFVSLLSACSHAGLLEEG 650

Query: 660 AR 661
            R
Sbjct: 651 RR 652



 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 168/559 (30%), Positives = 291/559 (52%), Gaps = 10/559 (1%)

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
           A ++   +Q +G + +      +L+ C     L  G Q H + I+     + + V  L++
Sbjct: 7   AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHV-AWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           MY +C  I EA  ++K     +  V +W  M+ GY Q GY  KA++  R M+  G+  ++
Sbjct: 67  MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            T  S L++C +  A ++G ++H   + +G   +V V + +++MYAKCG ++ AR + + 
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDK 186

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
            E  + VSW   I G+A  G  + A  +F+KM    +  +  TY SVLN F+S   L   
Sbjct: 187 MEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWG 246

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           K+VHS I+  G E    V  AL+ MYAK G+      VF  + ++D+I+W ++I G A  
Sbjct: 247 KAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEG 306

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G +EEA + ++ M+  G+ P+ +    +L+AC     L +G+++H+   K+G  S + V 
Sbjct: 307 GYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQ 366

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           N+L+ +Y++CG I DA  VFD M  +DVI+WTA+I G A++G G EAL  Y +M   G +
Sbjct: 367 NALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVE 426

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           P+ +T+  +L ACS     E  R   + + +  G+         ++++    G + +A+ 
Sbjct: 427 PNRVTYTSILNACSSPAALEWGRRIHQQVVEA-GLATDAHVGNTLVNMYSMCGSVKDARQ 485

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP----YVQLSNMYS 651
           + D+M+ + D   + A++     H    LG+ A      L+     P    Y+ + N  +
Sbjct: 486 VFDRMI-QRDIVAYNAMIGGYAAH---NLGKEALKLFDRLQEEGLKPDKVTYINMLNACA 541

Query: 652 TAGKWEDAARVRKLMKSRG 670
            +G  E A  +  L++  G
Sbjct: 542 NSGSLEWAREIHTLVRKGG 560



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 142/446 (31%), Positives = 236/446 (52%), Gaps = 43/446 (9%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++  G   +  Q+FEK+ +RD   WNTMI   A  G   EA +++N              
Sbjct: 272 YAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYN-------------- 317

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                            QMQ EG  P++ T   +L  C     L  G++ H    K  F 
Sbjct: 318 -----------------QMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFT 360

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLF-KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
            +  V   L+ MY++C  I +A  +F KM    K+ ++WT MI G +++G+G +A+  ++
Sbjct: 361 SDIGVQNALISMYSRCGSIKDARLVFDKMVR--KDVISWTAMIGGLAKSGFGAEALTVYQ 418

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
           +M+  GVE N+ T+ SIL AC++ +A ++G ++H  ++ +G   + +V + L++MY+ CG
Sbjct: 419 EMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCG 478

Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
            +  AR++ +     + V++N+MI G+A     KEAL LF ++    +K D  TY ++LN
Sbjct: 479 SVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLN 538

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
             A++  L  A+ +H+L+ K GF     V NAL+  YAK G+   A +VF  M  ++VIS
Sbjct: 539 ACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVIS 598

Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
           W ++I G A HG  ++AL+ F  M++ G+ PD V   S+LSAC+   +LE G++      
Sbjct: 599 WNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFC--- 655

Query: 465 KSGGCSSLSVDNSLVLVYAKCGCIND 490
                 S+S D +++      GC+ D
Sbjct: 656 ------SMSQDFAIIPTIEHYGCMVD 675



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 105/406 (25%), Positives = 186/406 (45%), Gaps = 53/406 (13%)

Query: 20  IGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYA 78
           +  A +T ++G        +  AL+  +S  G I +A  +F+KM  +D  +W  MI   A
Sbjct: 354 VAKAGFTSDIG--------VQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLA 405

Query: 79  NSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDN 138
            S                               G   EA  ++ +MQ  G  P++ T  +
Sbjct: 406 KS-------------------------------GFGAEALTVYQEMQQAGVEPNRVTYTS 434

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           +L  CS    L+ G + H   ++     +A V   LV+MY+ C  + +A  +F      +
Sbjct: 435 ILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQ-R 493

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           + VA+  MI GY+ +  G +A++ F  ++ EG++ ++ T+ ++L ACA   + ++  ++H
Sbjct: 494 DIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIH 553

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
             +   GF ++  V +AL+  YAKCG    A  + E     N +SWN++I G A+ G  +
Sbjct: 554 TLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQ 613

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK------SVHSLIVKTGFEGYKF 372
           +AL LF++M    +K D  T+ S+L+  +    L   +      S    I+ T  E Y  
Sbjct: 614 DALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPT-IEHY-- 670

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGS 417
               ++D+  + G LD A  +   M    +   W +L+  C  HG+
Sbjct: 671 --GCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGN 714


>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  625 bits (1612), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 306/739 (41%), Positives = 457/739 (61%), Gaps = 1/739 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           NT++  Y + G + EA++LF++   K+  +W+ +I GY++ GL  EAF LF  MQ EG  
Sbjct: 83  NTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLE 142

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P ++T  ++L  CS    L  G + H   ++     NA V   L+ MYAKC  + +A  +
Sbjct: 143 PDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRV 202

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F      ++ V+WTT+   Y+++GY  ++++ +  M  EGV  ++ T+ ++L+AC +++A
Sbjct: 203 FDAMAS-RDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAA 261

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            + G Q+H  I+ S   ++V V +AL  MY KCG +  AR + E     + ++WN+MI G
Sbjct: 262 LEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGG 321

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
               G  +EA  +F +M    +  D  TY ++L+  A    L   K +H+  VK G    
Sbjct: 322 LVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSD 381

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
               NALI+MY+K G++  A  VF+ M  +DV+SWT+L+ G A  G   E+   F  M  
Sbjct: 382 VRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQ 441

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
            G+  + +    +L AC+    L++G+++HA  +K+G  + L+V N+L+ +Y KCG + D
Sbjct: 442 QGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVED 501

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           A RV + M TRDV+TW  LI G AQNG+G EALQ ++ M +   +P+  TFV ++ AC  
Sbjct: 502 AIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRV 561

Query: 551 AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
             L E  R  F SM K YGI P   HYACM+D+L R+G L EA+ ++  M  +P A +W 
Sbjct: 562 RNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWG 621

Query: 611 ALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRG 670
           ALL+ACR HG++E+GE+AA    +LEP NA  YV LS +Y+ AG W D A++RKLMK RG
Sbjct: 622 ALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERG 681

Query: 671 IRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVE 730
           ++KEPG SW+E   +VH F++ D+ HP   +IYS+++ +   IK  GYVPD  F +H+++
Sbjct: 682 VKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIKSLGYVPDTRFVMHDLD 741

Query: 731 EEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILR 790
           +EGKE  + +HSEKLA+A+GL++ P   PIR+ KNLRVC DCHTA K+IS +  R II R
Sbjct: 742 QEGKERAVCHHSEKLAIAYGLISTPPETPIRVSKNLRVCTDCHTATKFISKITGREIIAR 801

Query: 791 DSNRFHHFKAGNCSCGDYW 809
           D++RFHHFK G CSCGDYW
Sbjct: 802 DAHRFHHFKNGECSCGDYW 820



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 127/386 (32%), Positives = 207/386 (53%), Gaps = 4/386 (1%)

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
           +G + + + +  +L +C        G QVH  IL  G + NVY+ + L+ +Y  CG ++ 
Sbjct: 38  KGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNE 97

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
           ARRL +     + VSWN MI G+A +G  +EA +LF  M    ++ D FT+ S+L+  +S
Sbjct: 98  ARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSS 157

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
              LN  + VH  +++ G      V NALI MYAK G++  A  VF+ M  +D +SWT+L
Sbjct: 158 PAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTL 217

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
               A  G  +E+LK +  M   G+ P  +   ++LSAC  L  LE G+Q+HA  ++S  
Sbjct: 218 TGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEH 277

Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
            S + V  +L  +Y KCG + DA  VF+ +  RDVI W  +I G   +G+ +EA   + +
Sbjct: 278 HSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHR 337

Query: 529 MLARGTKPDYITFVGLLFACSH-AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRS 587
           ML     PD +T++ +L AC+   GLA     +  ++    G+         +I++  ++
Sbjct: 338 MLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKD--GLVSDVRFGNALINMYSKA 395

Query: 588 GKLIEAKALLDQMVGEPDATVWKALL 613
           G + +A+ + D+M  + D   W AL+
Sbjct: 396 GSMKDARQVFDRM-PKRDVVSWTALV 420



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 150/531 (28%), Positives = 255/531 (48%), Gaps = 36/531 (6%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++  G + +A ++F+ M+ RD  +W T+  AYA SG  +E+ K ++              
Sbjct: 190 YAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYH-------------- 235

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                             M  EG RPS+ T  NVL  C     L++G+Q H   +++   
Sbjct: 236 -----------------AMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHH 278

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            +  V T L  MY KC  + +A  +F+  P+ ++ +AW TMI G   +G   +A   F  
Sbjct: 279 SDVRVSTALTKMYIKCGAVKDAREVFECLPN-RDVIAWNTMIGGLVDSGQLEEAHGMFHR 337

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M  E V  ++ T+ +IL+ACA       G ++H   +  G  ++V   +ALI+MY+K G 
Sbjct: 338 MLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGS 397

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           +  AR++ +     + VSW +++ G+A  G   E+ S FKKM  + ++ +  TY  VL  
Sbjct: 398 MKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKA 457

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
            ++ + L   K +H+ +VK G      V NAL+ MY K G+++ A  V   M  +DV++W
Sbjct: 458 CSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTW 517

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
            +LI G A +G   EAL+ F  M+   + P+     +++SAC    ++E G++  A   K
Sbjct: 518 NTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRK 577

Query: 466 SGGCSSLSVDNS-LVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEAL 523
             G        + +V + A+ G + +A  V  +M  +     W AL+  C  +G  +   
Sbjct: 578 DYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGE 637

Query: 524 QFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
           Q  +Q L +    +  T+V L F  + AG+  +       + K  G+K  P
Sbjct: 638 QAAEQCL-KLEPQNAGTYVSLSFIYAAAGMWRDVA-KLRKLMKERGVKKEP 686



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 206/406 (50%), Gaps = 45/406 (11%)

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
            S ++  +  G++  A  + + +H +  ++D + Y  +L       DL   K VH  I++
Sbjct: 14  KSSMIPTSTDGWYAPA-DVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILR 72

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            G +   ++ N L+ +Y   G+++ A  +F+   +K V+SW  +I+G A+ G  +EA   
Sbjct: 73  FGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNL 132

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           F+ M+  G+ PD     SILSAC+    L +G++VH   +++G  ++ +V N+L+ +YAK
Sbjct: 133 FTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAK 192

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG + DA RVFD+M +RD ++WT L    A++G  +E+L+ Y  ML  G +P  IT++ +
Sbjct: 193 CGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNV 252

Query: 545 LFACS-----------HAGLAENARW----YFESMDKVY----GIKPGPDHYAC------ 579
           L AC            HA + E+          ++ K+Y     +K   + + C      
Sbjct: 253 LSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDV 312

Query: 580 -----MIDLLGRSGKLIEAKALLDQMVGE---PDATVWKALLSACRVHGDLELGE----R 627
                MI  L  SG+L EA  +  +M+ E   PD   + A+LSAC   G L  G+    R
Sbjct: 313 IAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHAR 372

Query: 628 AANN--LFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
           A  +  + ++   NA     L NMYS AG  +DA +V   M  R +
Sbjct: 373 AVKDGLVSDVRFGNA-----LINMYSKAGSMKDARQVFDRMPKRDV 413


>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
          Length = 986

 Score =  623 bits (1607), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 323/787 (41%), Positives = 481/787 (61%), Gaps = 9/787 (1%)

Query: 29  VGNSVKP-----ASDLNRALVDFSNSGEIDEAGQLFEKMS-DRDGFTWNTMIAAYANSGR 82
           V +SVKP      S LN A  D  N  +  E   L  K   D D F    +I  +   G 
Sbjct: 203 VQDSVKPDKRTFVSMLN-ACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGD 261

Query: 83  LREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRL 142
           + +A K+F+  P ++  TW+S+I G + +G   +A  LF +M+ EG +P +    ++LR 
Sbjct: 262 IGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRA 321

Query: 143 CSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVA 202
           C+    L++G++ H    +  +D   +V T ++ MY KC  + +A  +F +   G+N V+
Sbjct: 322 CNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVK-GRNVVS 380

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
           WT MI G++Q+G   +A   F  M   G+E N+ TF SIL AC++ SA   G Q+   I+
Sbjct: 381 WTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHII 440

Query: 263 SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
            +G+ ++  V++AL+ MYAKCG L  A R+ E     N V+WN+MI  + +   +  AL+
Sbjct: 441 EAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALA 500

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYA 382
            F+ +    IK +  T+ S+LN   S+  L   K VH LI+K G E    V+NAL+ M+ 
Sbjct: 501 TFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFV 560

Query: 383 KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
             G+L  A  +FN M  +D++SW ++I G   HG  + A  YF  M+ SGI PD +  + 
Sbjct: 561 NCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTG 620

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
           +L+ACA    L  G+++HA+  ++     + V   L+ +Y KCG I DA++VF  +  ++
Sbjct: 621 LLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKN 680

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
           V +WT++I G AQ+G+GKEAL+ + QM   G KPD+ITFVG L AC+HAGL E    +F+
Sbjct: 681 VYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQ 740

Query: 563 SMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDL 622
           SM K + I+P  +HY CM+DL GR+G L EA   + +M  EPD+ VW ALL AC+VH ++
Sbjct: 741 SM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNV 799

Query: 623 ELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVET 682
           EL E+AA    EL+P +   +V LSN+Y+ AG W++ A++RK+M  RG+ K+PG SW+E 
Sbjct: 800 ELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEV 859

Query: 683 NSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHS 742
           + +VH F S+D+ HP   +I+++++ + + +++ GYVPD  + LH+VE+  KE  L YHS
Sbjct: 860 DGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHS 919

Query: 743 EKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGN 802
           E+LA+ +GLL  P   PI I KNLRVCGDCHTA K+IS +  R II RDSNRFHHFK G 
Sbjct: 920 ERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGV 979

Query: 803 CSCGDYW 809
           CSCGD+W
Sbjct: 980 CSCGDFW 986



 Score =  313 bits (802), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 195/607 (32%), Positives = 307/607 (50%), Gaps = 36/607 (5%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  NT+I  YA  G    AK++F++   K+ ++W+ L+ GY  +GL  EAF+L  QM 
Sbjct: 144 DIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMV 203

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            +  +P + T  ++L  C+    + +G + +   +K  +D + FV T L++M+ KC  I 
Sbjct: 204 QDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIG 263

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A  +F   P  ++ V WT+MITG +++G   +A   F+ M  EGV+ ++  F S+L AC
Sbjct: 264 DATKVFDNLPT-RDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRAC 322

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
               A + G +VH  +   G++  +YV +A++ MY KCG ++ A  + +  +  N VSW 
Sbjct: 323 NHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWT 382

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +MI GFA+ G   EA   F KM    I+ +  T+ S+L   +S   L   + +   I++ 
Sbjct: 383 AMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEA 442

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G+     V  AL+ MYAK G+L  A  VF  +  ++V++W ++IT    H  Y+ AL  F
Sbjct: 443 GYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATF 502

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             +   GI P+    +SIL+ C     LE G+ VH + +K+G  S L V N+LV ++  C
Sbjct: 503 QALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNC 562

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G +  A  +F+ M  RD+++W  +I G  Q+GK + A  ++  M   G KPD ITF GLL
Sbjct: 563 GDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLL 622

Query: 546 FAC-SHAGLAENARWY---------------------------FESMDKVYGIKPGPDHY 577
            AC S   L E  R +                            E   +V+   P  + Y
Sbjct: 623 NACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVY 682

Query: 578 A--CMIDLLGRSGKLIEAKALLDQMVGE---PDATVWKALLSACRVHGDLELGERAANNL 632
           +   MI    + G+  EA  L  QM  E   PD   +   LSAC   G +E G     ++
Sbjct: 683 SWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM 742

Query: 633 --FELEP 637
             F +EP
Sbjct: 743 KEFNIEP 749



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 152/505 (30%), Positives = 270/505 (53%), Gaps = 3/505 (0%)

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA ++  ++     +  + T   +L+LC     L  GE+ + +  K+    + F+   L+
Sbjct: 93  EAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLI 152

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           +MYAKC     A+ +F    + K+  +W  ++ GY Q+G   +A +    M  + V+ ++
Sbjct: 153 NMYAKCGNTISAKQIFDDMRE-KDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDK 211

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            TF S+L ACA     D G +++  IL +G++ +++V +ALI+M+ KCGD+  A ++ + 
Sbjct: 212 RTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDN 271

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               + V+W SMI G AR G  K+A +LF++M    ++ D   + S+L        L   
Sbjct: 272 LPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQG 331

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           K VH+ + + G++   +V  A++ MY K G+++ A  VF+L++ ++V+SWT++I G A H
Sbjct: 332 KKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQH 391

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G  +EA  +F+ M  SGI P+ V   SIL AC+  + L+ GQQ+    +++G  S   V 
Sbjct: 392 GRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVR 451

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
            +L+ +YAKCG + DA+RVF+ +  ++V+ W A+I    Q+ +   AL  +  +L  G K
Sbjct: 452 TALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIK 511

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           P+  TF  +L  C  +   E  +W    + K  G++        ++ +    G L+ AK 
Sbjct: 512 PNSSTFTSILNVCKSSDSLELGKWVHFLIMKA-GLESDLHVSNALVSMFVNCGDLMSAKN 570

Query: 596 LLDQMVGEPDATVWKALLSACRVHG 620
           L + M  + D   W  +++    HG
Sbjct: 571 LFNDM-PKRDLVSWNTIIAGFVQHG 594



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 237/429 (55%), Gaps = 6/429 (1%)

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
           +F D K+      ++   S+ G   +A++    +    ++  + T+ ++L  C       
Sbjct: 68  VFADIKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLG 127

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G +++  I  SG + ++++++ LI+MYAKCG+  SA+++ +     +  SWN ++ G+ 
Sbjct: 128 DGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYV 187

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
           + G ++EA  L ++M    +K D  T+ S+LN  A   +++  + +++LI+K G++   F
Sbjct: 188 QHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLF 247

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           V  ALI+M+ K G++  A  VF+ +  +D+++WTS+ITG A HG +++A   F  M   G
Sbjct: 248 VGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEG 307

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
           + PD V   S+L AC     LE G++VHA   + G  + + V  +++ +Y KCG + DA 
Sbjct: 308 VQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDAL 367

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
            VFD +  R+V++WTA+I G AQ+G+  EA  F+++M+  G +P+ +TF+ +L ACS   
Sbjct: 368 EVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPS 427

Query: 553 LAENARWYFESMDKVYGIKPGPDH--YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
             +  +   +  D +     G D      ++ +  + G L +A  + ++ + + +   W 
Sbjct: 428 ALKRGQ---QIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEK-ISKQNVVAWN 483

Query: 611 ALLSACRVH 619
           A+++A   H
Sbjct: 484 AMITAYVQH 492



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 212/406 (52%), Gaps = 34/406 (8%)

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
           R + +++I +    N+++   ++ G   EA+ + +++ +  I+I   TY ++L       
Sbjct: 65  RCVVFADIKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFK 124

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           +L + + +++ I K+G +   F+ N LI+MYAK GN   A  +F+ M++KDV SW  L+ 
Sbjct: 125 NLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLG 184

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
           G   HG YEEA K    M    + PD     S+L+ACA+   ++ G++++ + LK+G  +
Sbjct: 185 GYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDT 244

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
            L V  +L+ ++ KCG I DA +VFD++ TRD++TWT++I G A++G+ K+A   + +M 
Sbjct: 245 DLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRME 304

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENAR----------WYFE---------------SMD 565
             G +PD + FV LL AC+H    E  +          W  E               SM+
Sbjct: 305 EEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSME 364

Query: 566 ---KVYGIKPGPD--HYACMIDLLGRSGKLIEAKALLDQMVG---EPDATVWKALLSACR 617
              +V+ +  G +   +  MI    + G++ EA    ++M+    EP+   + ++L AC 
Sbjct: 365 DALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACS 424

Query: 618 VHGDLELGERAANNLFELE-PMNAMPYVQLSNMYSTAGKWEDAARV 662
               L+ G++  +++ E     +      L +MY+  G  +DA RV
Sbjct: 425 SPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRV 470


>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 986

 Score =  623 bits (1607), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 323/787 (41%), Positives = 481/787 (61%), Gaps = 9/787 (1%)

Query: 29  VGNSVKP-----ASDLNRALVDFSNSGEIDEAGQLFEKMS-DRDGFTWNTMIAAYANSGR 82
           V +SVKP      S LN A  D  N  +  E   L  K   D D F    +I  +   G 
Sbjct: 203 VQDSVKPDKRTFVSMLN-ACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGD 261

Query: 83  LREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRL 142
           + +A K+F+  P ++  TW+S+I G + +G   +A  LF +M+ EG +P +    ++LR 
Sbjct: 262 IGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRA 321

Query: 143 CSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVA 202
           C+    L++G++ H    +  +D   +V T ++ MY KC  + +A  +F +   G+N V+
Sbjct: 322 CNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVK-GRNVVS 380

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
           WT MI G++Q+G   +A   F  M   G+E N+ TF SIL AC++ SA   G Q+   I+
Sbjct: 381 WTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHII 440

Query: 263 SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
            +G+ ++  V++AL+ MYAKCG L  A R+ E     N V+WN+MI  + +   +  AL+
Sbjct: 441 EAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALA 500

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYA 382
            F+ +    IK +  T+ S+LN   S+  L   K VH LI+K G E    V+NAL+ M+ 
Sbjct: 501 TFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFV 560

Query: 383 KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
             G+L  A  +FN M  +D++SW ++I G   HG  + A  YF  M+ SGI PD +  + 
Sbjct: 561 NCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTG 620

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
           +L+ACA    L  G+++HA+  ++     + V   L+ +Y KCG I DA++VF  +  ++
Sbjct: 621 LLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKN 680

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
           V +WT++I G AQ+G+GKEAL+ + QM   G KPD+ITFVG L AC+HAGL E    +F+
Sbjct: 681 VYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQ 740

Query: 563 SMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDL 622
           SM K + I+P  +HY CM+DL GR+G L EA   + +M  EPD+ VW ALL AC+VH ++
Sbjct: 741 SM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNV 799

Query: 623 ELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVET 682
           EL E+AA    EL+P +   +V LSN+Y+ AG W++ A++RK+M  RG+ K+PG SW+E 
Sbjct: 800 ELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEV 859

Query: 683 NSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHS 742
           + +VH F S+D+ HP   +I+++++ + + +++ GYVPD  + LH+VE+  KE  L YHS
Sbjct: 860 DGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPDTRYVLHDVEDNEKEQALFYHS 919

Query: 743 EKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGN 802
           E+LA+ +GLL  P   PI I KNLRVCGDCHTA K+IS +  R II RDSNRFHHFK G 
Sbjct: 920 ERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARDSNRFHHFKDGV 979

Query: 803 CSCGDYW 809
           CSCGD+W
Sbjct: 980 CSCGDFW 986



 Score =  318 bits (816), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 196/607 (32%), Positives = 308/607 (50%), Gaps = 36/607 (5%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F WNT+I  YA  G    AK++F++   K+ ++W+ L+ GY  +GL  EAF+L  QM 
Sbjct: 144 DIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMV 203

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            +  +P + T  ++L  C+    + +G + +   +K  +D + FV T L++M+ KC  I 
Sbjct: 204 QDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIG 263

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A  +F   P  ++ V WT+MITG +++G   +A   F+ M  EGV+ ++  F S+L AC
Sbjct: 264 DATKVFDNLPT-RDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRAC 322

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
               A + G +VH  +   G++  +YV +A++ MY KCG ++ A  + +  +  N VSW 
Sbjct: 323 NHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWT 382

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +MI GFA+ G   EA   F KM    I+ +  T+ S+L   +S   L   + +   I++ 
Sbjct: 383 AMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEA 442

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G+     V  AL+ MYAK G+L  A  VF  +  ++V++W ++IT    H  Y+ AL  F
Sbjct: 443 GYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATF 502

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             +   GI P+    +SIL+ C     LE G+ VH + +K+G  S L V N+LV ++  C
Sbjct: 503 QALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNC 562

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G +  A  +F+ M  RD+++W  +I G  Q+GK + A  ++  M   G KPD ITF GLL
Sbjct: 563 GDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLL 622

Query: 546 FAC-SHAGLAENARWY---------------------------FESMDKVYGIKPGPDHY 577
            AC S   L E  R +                            E   +V+   P  + Y
Sbjct: 623 NACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVY 682

Query: 578 A--CMIDLLGRSGKLIEAKALLDQMVGE---PDATVWKALLSACRVHGDLELGERAANNL 632
           +   MI    + G+  EA  L  QM  E   PD   +   LSAC   G +E G     ++
Sbjct: 683 SWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM 742

Query: 633 --FELEP 637
             F +EP
Sbjct: 743 KEFNIEP 749



 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 152/505 (30%), Positives = 270/505 (53%), Gaps = 3/505 (0%)

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA ++  ++     +  + T   +L+LC     L  GE+ + +  K+    + F+   L+
Sbjct: 93  EAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLI 152

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           +MYAKC     A+ +F    + K+  +W  ++ GY Q+G   +A +    M  + V+ ++
Sbjct: 153 NMYAKCGNTISAKQIFDDMRE-KDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDK 211

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            TF S+L ACA     D G +++  IL +G++ +++V +ALI+M+ KCGD+  A ++ + 
Sbjct: 212 RTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDN 271

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               + V+W SMI G AR G  K+A +LF++M    ++ D   + S+L        L   
Sbjct: 272 LPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQG 331

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           K VH+ + + G++   +V  A++ MY K G+++ A  VF+L++ ++V+SWT++I G A H
Sbjct: 332 KKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQH 391

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G  +EA  +F+ M  SGI P+ V   SIL AC+  + L+ GQQ+    +++G  S   V 
Sbjct: 392 GRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVR 451

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
            +L+ +YAKCG + DA+RVF+ +  ++V+ W A+I    Q+ +   AL  +  +L  G K
Sbjct: 452 TALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIK 511

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           P+  TF  +L  C  +   E  +W    + K  G++        ++ +    G L+ AK 
Sbjct: 512 PNSSTFTSILNVCKSSDSLELGKWVHFLIMKA-GLESDLHVSNALVSMFVNCGDLMSAKN 570

Query: 596 LLDQMVGEPDATVWKALLSACRVHG 620
           L + M  + D   W  +++    HG
Sbjct: 571 LFNDM-PKRDLVSWNTIIAGFVQHG 594



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 236/429 (55%), Gaps = 6/429 (1%)

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
           +F D K+      ++   S+ G   +A++    +    ++  + T+ ++L  C       
Sbjct: 68  VFADIKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLG 127

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G +++  I  SG + ++++ + LI+MYAKCG+  SA+++ +     +  SWN ++ G+ 
Sbjct: 128 DGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYV 187

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
           + G ++EA  L ++M    +K D  T+ S+LN  A   +++  + +++LI+K G++   F
Sbjct: 188 QHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLF 247

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           V  ALI+M+ K G++  A  VF+ +  +D+++WTS+ITG A HG +++A   F  M   G
Sbjct: 248 VGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEG 307

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
           + PD V   S+L AC     LE G++VHA   + G  + + V  +++ +Y KCG + DA 
Sbjct: 308 VQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDAL 367

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
            VFD +  R+V++WTA+I G AQ+G+  EA  F+++M+  G +P+ +TF+ +L ACS   
Sbjct: 368 EVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPS 427

Query: 553 LAENARWYFESMDKVYGIKPGPDH--YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
             +  +   +  D +     G D      ++ +  + G L +A  + ++ + + +   W 
Sbjct: 428 ALKRGQ---QIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEK-ISKQNVVAWN 483

Query: 611 ALLSACRVH 619
           A+++A   H
Sbjct: 484 AMITAYVQH 492



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 212/406 (52%), Gaps = 34/406 (8%)

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
           R + +++I +    N+++   ++ G   EA+ + +++ +  I+I   TY ++L       
Sbjct: 65  RCVVFADIKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFK 124

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           +L + + +++ I K+G +   F+ N LI+MYAK GN   A  +F+ M++KDV SW  L+ 
Sbjct: 125 NLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLG 184

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
           G   HG YEEA K    M    + PD     S+L+ACA+   ++ G++++ + LK+G  +
Sbjct: 185 GYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDT 244

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
            L V  +L+ ++ KCG I DA +VFD++ TRD++TWT++I G A++G+ K+A   + +M 
Sbjct: 245 DLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRME 304

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENAR----------WYFE---------------SMD 565
             G +PD + FV LL AC+H    E  +          W  E               SM+
Sbjct: 305 EEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSME 364

Query: 566 ---KVYGIKPGPD--HYACMIDLLGRSGKLIEAKALLDQMVG---EPDATVWKALLSACR 617
              +V+ +  G +   +  MI    + G++ EA    ++M+    EP+   + ++L AC 
Sbjct: 365 DALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACS 424

Query: 618 VHGDLELGERAANNLFELE-PMNAMPYVQLSNMYSTAGKWEDAARV 662
               L+ G++  +++ E     +      L +MY+  G  +DA RV
Sbjct: 425 SPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRV 470


>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 804

 Score =  621 bits (1601), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 302/742 (40%), Positives = 455/742 (61%), Gaps = 1/742 (0%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           +  NT++  YA+ G + EA++LF++   K+  +W+ +I GY++ GL  EAF LF  MQ E
Sbjct: 64  YITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQE 123

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
              P ++T  ++L  CS   +L  G + H   ++     +  V   L+ MYAKC  + +A
Sbjct: 124 RLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDA 183

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F      ++ V+WTT+   Y+++GYG ++++ +  M  E V  ++ T+ ++L+AC +
Sbjct: 184 RRVFDAMAS-RDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGS 242

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           ++A + G Q+H  I+ S + ++V V +AL  MY KCG    AR + E     + ++WN+M
Sbjct: 243 LAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTM 302

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I GF   G  +EA   F +M    +  D  TY +VL+  A    L   K +H+   K G 
Sbjct: 303 IRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGL 362

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
                  NALI+MY+K G++  A  VF+ M  +DV+SWT+L+   A      E+   F  
Sbjct: 363 VSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQ 422

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           M   G+  + +    +L AC+    L++G+++HA  +K+G  + L+V N+L+ +Y KCG 
Sbjct: 423 MLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGS 482

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           + DA RVF+ M  RDV+TW  LI G  QNG+G EALQ Y+ M + G +P+  TFV +L A
Sbjct: 483 VEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSA 542

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
           C    L E  R  F  M K YGI P   HYACM+D+L R+G L EA+ ++  +  +P A 
Sbjct: 543 CRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAA 602

Query: 608 VWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
           +W ALL+ACR+H ++E+GERAA +  +LEP NA  YV LS +Y+ AG W D A++RK MK
Sbjct: 603 MWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMK 662

Query: 668 SRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALH 727
            RG++KEPG SW+E   +VH F++ D+ HP   +IY++++ +   +K  GYVPD  F +H
Sbjct: 663 ERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQMKSLGYVPDTRFVMH 722

Query: 728 NVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHI 787
           ++++EGKE  + +HSEKLA+A+GL++ P G PIRI KNLRVC DCHTA K+IS +  R I
Sbjct: 723 DLDDEGKERAVCHHSEKLAIAYGLISTPPGTPIRISKNLRVCTDCHTATKFISKITKREI 782

Query: 788 ILRDSNRFHHFKAGNCSCGDYW 809
           I RD++RFHHFK G CSCGDYW
Sbjct: 783 IARDAHRFHHFKNGECSCGDYW 804



 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 168/542 (30%), Positives = 269/542 (49%), Gaps = 44/542 (8%)

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           +  +G +   Y    +L+ C     L  G+Q H + ++     N ++   L+ +YA C  
Sbjct: 19  LHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGS 78

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + EA  LF  F + K+ V+W  MI+GY+  G   +A   F  M+ E +E ++FTF SIL+
Sbjct: 79  VNEARQLFDKFSN-KSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILS 137

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC++ +  ++G ++H  ++ +G   +  V +ALI MYAKCG +  ARR+ +     +EVS
Sbjct: 138 ACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVS 197

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           W ++   +A  G+ +E+L  +  M    ++    TY +VL+   S   L   K +H+ IV
Sbjct: 198 WTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIV 257

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           ++ +     V+ AL  MY K G    A  VF  +  +DVI+W ++I G    G  EEA  
Sbjct: 258 ESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHG 317

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            F  M   G+ PD    +++LSACA    L  G+++HA   K G  S +   N+L+ +Y+
Sbjct: 318 TFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYS 377

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           K G + DA +VFD M  RDV++WT L+   A   +  E+   + QML +G K + IT++ 
Sbjct: 378 KAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMC 437

Query: 544 LLFACS-----------HA------------------------GLAENARWYFESMDKVY 568
           +L ACS           HA                        G  E+A   FE M    
Sbjct: 438 VLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRD 497

Query: 569 GIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE---PDATVWKALLSACRVHGDLELG 625
            +      +  +I  LG++G+ +EA    + M  E   P+A  +  +LSACRV   +E G
Sbjct: 498 VVT-----WNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEG 552

Query: 626 ER 627
            R
Sbjct: 553 RR 554



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 199/403 (49%), Gaps = 45/403 (11%)

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           ++   + G++  A  + + +H +  ++D + Y  +L       DL   K VH  I++ G 
Sbjct: 1   MIPTGKDGWYAPA-DVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGV 59

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
           +   ++ N L+ +YA  G+++ A  +F+   +K V+SW  +I+G A+ G  +EA   F+ 
Sbjct: 60  KPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTL 119

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           M+   + PD     SILSAC+   VL +G+++H   +++G  +  +V N+L+ +YAKCG 
Sbjct: 120 MQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGS 179

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           + DA RVFD+M +RD ++WT L    A++G G+E+L+ Y  ML    +P  IT++ +L A
Sbjct: 180 VRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSA 239

Query: 548 CSHAGLAENARWYF---------------ESMDKVY----GIKPGPDHYAC--------- 579
           C      E  +                   ++ K+Y      K   + + C         
Sbjct: 240 CGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAW 299

Query: 580 --MIDLLGRSGKLIEAKALLDQMVGE---PDATVWKALLSACRVHGDLELGE----RAAN 630
             MI     SG+L EA     +M+ E   PD   +  +LSAC   G L  G+    RAA 
Sbjct: 300 NTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAK 359

Query: 631 N--LFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
           +  + ++   NA     L NMYS AG  +DA +V   M  R +
Sbjct: 360 DGLVSDVRFGNA-----LINMYSKAGSMKDARQVFDRMPKRDV 397



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 176/376 (46%), Gaps = 34/376 (9%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +   G   +A ++FE +S RD   WNTMI  + +SG+L EA   F+              
Sbjct: 275 YMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFH-------------- 320

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                            +M  EG  P + T   VL  C+  G L RG++ H  A K    
Sbjct: 321 -----------------RMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLV 363

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            +      L++MY+K   + +A  +F   P  ++ V+WTT++  Y+      ++   F+ 
Sbjct: 364 SDVRFGNALINMYSKAGSMKDARQVFDRMPK-RDVVSWTTLLGRYADCDQVVESFTTFKQ 422

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M  +GV++N+ T+  +L AC+   A  +G ++H  ++ +G  A++ V +AL+ MY KCG 
Sbjct: 423 MLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGS 482

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN- 344
           ++ A R+ E   + + V+WN++I G  + G   EAL  ++ M +  ++ +  T+ +VL+ 
Sbjct: 483 VEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSA 542

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL-DCAFMVFNLMQDKDVI 403
           C   N+     +    +    G    +     ++D+ A+ G+L +   ++  +       
Sbjct: 543 CRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAA 602

Query: 404 SWTSLITGCAYHGSYE 419
            W +L+  C  H + E
Sbjct: 603 MWGALLAACRIHCNVE 618


>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  620 bits (1598), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 312/767 (40%), Positives = 472/767 (61%), Gaps = 6/767 (0%)

Query: 47  SNSGEIDEAGQLFEKMS----DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWS 102
           +++  +D+ G+LF  +     D D F    +I  +   G + +A K+FN  P ++  TW+
Sbjct: 216 ADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWT 275

Query: 103 SLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT 162
           S+I G + +    +A  LF  M+ EG +P +    ++L+ C+    L++G++ H    + 
Sbjct: 276 SMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEV 335

Query: 163 CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIEC 222
             D   +V T L+ MY KC  + +A  +F +   G+N V+WT MI G++Q+G   +A   
Sbjct: 336 GLDTEIYVGTALLSMYTKCGSMEDALEVFNLV-KGRNVVSWTAMIAGFAQHGRMEEAFLF 394

Query: 223 FRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK 282
           F  M   G+E N+ TF SIL AC+  SA   G Q+H  I+ +G+  +  V++AL+ MYAK
Sbjct: 395 FNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAK 454

Query: 283 CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
           CG L  AR + E     N V+WN+MI  + +   +  A++ F+ +    IK D  T+ S+
Sbjct: 455 CGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSI 514

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV 402
           LN   S   L   K V SLI++ GFE    + NAL+ M+   G+L  A  +FN M ++D+
Sbjct: 515 LNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDL 574

Query: 403 ISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAV 462
           +SW ++I G   HG  + A  YF  M+ SG+ PD +  + +L+ACA    L  G+++HA+
Sbjct: 575 VSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHAL 634

Query: 463 FLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEA 522
             ++     + V   L+ +Y KCG I+DA+ VF ++  ++V +WT++I G AQ+G+GKEA
Sbjct: 635 ITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEA 694

Query: 523 LQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMID 582
           L+ + QM   G KPD+ITFVG L AC+HAGL +    +FESM K + I+P  +HY CM+D
Sbjct: 695 LELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESM-KDFNIEPRMEHYGCMVD 753

Query: 583 LLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           L GR+G L EA   +++M  +PD+ +W ALL AC+VH D+EL E+ A    EL+P +   
Sbjct: 754 LFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGV 813

Query: 643 YVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDI 702
           YV LSN+Y+ AG W++  ++RK+M  RG+ K+PG SW+E + +VHIF S+D+ HP   +I
Sbjct: 814 YVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEI 873

Query: 703 YSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRI 762
           ++++  + + +K+ GYVPD  + LH+VE+  KE  L +HSE+LA+A+GLL  P   PI I
Sbjct: 874 HAELGRLHMEMKKLGYVPDTRYVLHDVEDSEKEHALCHHSERLAIAYGLLKTPPLTPIVI 933

Query: 763 FKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            KNLRVCGDCHTA K IS +  R II RDSNRFHHFK G CSCGD+W
Sbjct: 934 SKNLRVCGDCHTATKLISKITKRQIIARDSNRFHHFKDGVCSCGDFW 980



 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 152/489 (31%), Positives = 256/489 (52%), Gaps = 3/489 (0%)

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
           + T  ++L+LC     L  GE+ H +   +    + F+   L+ MYAKC     A+ +F 
Sbjct: 104 RQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFD 163

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
             PD K+  +W  ++ GY Q+    +A      M  +GV+ +++TF  +L ACA     D
Sbjct: 164 EMPD-KDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVD 222

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G ++   IL++G++ +++V +ALI+M+ KCG +D A ++       + ++W SMI G A
Sbjct: 223 KGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLA 282

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
           R    K+A +LF+ M    ++ D   + S+L        L   K VH+ + + G +   +
Sbjct: 283 RHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIY 342

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           V  AL+ MY K G+++ A  VFNL++ ++V+SWT++I G A HG  EEA  +F+ M  SG
Sbjct: 343 VGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESG 402

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
           I P+ V   SIL AC+  + L+ G+Q+H   +K+G  +   V  +L+ +YAKCG + DA 
Sbjct: 403 IEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDAR 462

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
            VF+ +  ++V+ W A+I    Q+ K   A+  +  +L  G KPD  TF  +L  C    
Sbjct: 463 NVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPD 522

Query: 553 LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
             E  +W  +S+    G +        ++ +    G L+ A  L + M  E D   W  +
Sbjct: 523 ALELGKW-VQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDM-PERDLVSWNTI 580

Query: 613 LSACRVHGD 621
           ++    HG+
Sbjct: 581 IAGFVQHGE 589



 Score =  223 bits (567), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 127/426 (29%), Positives = 231/426 (54%), Gaps = 2/426 (0%)

Query: 194 FPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDF 253
           F D KN       +   S+ G   +A+     +    ++ ++ T+ S+L  C        
Sbjct: 63  FVDIKNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGD 122

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           G ++H  I  S  + ++++ + LI MYAKCG+ +SA+++ +     +  SWN ++ G+ +
Sbjct: 123 GERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQ 182

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
              ++EA  L ++M    +K D +T+  +LN  A   +++    + SLI+  G++   FV
Sbjct: 183 HRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFV 242

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
             ALI+M+ K G +D A  VFN +  +D+I+WTS+ITG A H  +++A   F  M   G+
Sbjct: 243 GTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGV 302

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
            PD V   S+L AC     LE G++VHA   + G  + + V  +L+ +Y KCG + DA  
Sbjct: 303 QPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALE 362

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGL 553
           VF+ +  R+V++WTA+I G AQ+G+ +EA  F+++M+  G +P+ +TF+ +L ACS    
Sbjct: 363 VFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSA 422

Query: 554 AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
            +  R   + + K   I       A ++ +  + G L++A+ + ++ + + +   W A++
Sbjct: 423 LKQGRQIHDRIIKAGYITDDRVRTA-LLSMYAKCGSLMDARNVFER-ISKQNVVAWNAMI 480

Query: 614 SACRVH 619
           +A   H
Sbjct: 481 TAYVQH 486



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 179/346 (51%), Gaps = 4/346 (1%)

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
           E+ +I N    N+ +   ++ G   EA+ +   + +  I+I   TY S+L     + +L 
Sbjct: 62  EFVDIKNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLG 121

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
           + + +H+ I  +  +   F+ N LI MYAK GN + A  +F+ M DKDV SW  L+ G  
Sbjct: 122 DGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYV 181

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
            H  YEEA +    M   G+ PD      +L+ACA+   ++ G ++ ++ L +G  + L 
Sbjct: 182 QHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLF 241

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
           V  +L+ ++ KCG ++DA +VF+++  RD+ITWT++I G A++ + K+A   +  M   G
Sbjct: 242 VGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEG 301

Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
            +PD + FV LL AC+H    E  +     M +V G+         ++ +  + G + +A
Sbjct: 302 VQPDKVAFVSLLKACNHPEALEQGKRVHARMKEV-GLDTEIYVGTALLSMYTKCGSMEDA 360

Query: 594 KALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFE--LEP 637
             + + + G  +   W A+++    HG +E      N + E  +EP
Sbjct: 361 LEVFNLVKGR-NVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEP 405



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 67/158 (42%), Gaps = 38/158 (24%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++  G ID+A  +F  +  ++ ++W +MI  YA  GR +                     
Sbjct: 654 YTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGK--------------------- 692

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                     EA ELF QMQ EG +P   T    L  C+  GL++ G   H +     F+
Sbjct: 693 ----------EALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEG--LHHFESMKDFN 740

Query: 166 LNAFV--VTGLVDMYAKCKCIFEA-EYLFKM--FPDGK 198
           +   +     +VD++ +   + EA E++ KM   PD +
Sbjct: 741 IEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSR 778


>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score =  614 bits (1583), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 311/745 (41%), Positives = 459/745 (61%), Gaps = 7/745 (0%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           +  NT+I  ++  G + EA++ F+    K   TW+++I GY+  G   EAF LF QM  E
Sbjct: 97  YELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDE 156

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
              PS  T   VL  CS    L+ G++FH   IK  F  +  + T LV MY K   +  A
Sbjct: 157 AMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGA 216

Query: 188 EYLFKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
             +F    DG   ++   +  MI GY+++G G KA + F  M+ EG + N+ +F SIL  
Sbjct: 217 RQVF----DGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDG 272

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C+   A  +G  VH   +++G   +V V +ALI MY  CG ++ ARR+ +  ++ + VSW
Sbjct: 273 CSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSW 332

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
             MI G+A     ++A  LF  M    I+ D  TY  ++N  AS+ DL+ A+ +HS +V+
Sbjct: 333 TVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVR 392

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            GF     V+ AL+ MYAK G +  A  VF+ M  +DV+SW+++I     +G  EEA + 
Sbjct: 393 AGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFET 452

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           F  M+ + + PD V   ++L+AC  L  L+ G +++   +K+   S + V N+L+ +  K
Sbjct: 453 FHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVK 512

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
            G I  A  +F++M  RDV+TW  +I G + +G  +EAL  +D+ML    +P+ +TFVG+
Sbjct: 513 HGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGV 572

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L ACS AG  E  R +F  +    GI P  + Y CM+DLLGR+G+L EA+ L+++M  +P
Sbjct: 573 LSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKP 632

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
           ++++W  LL+ACR++G+L++ ERAA      EP +   YVQLS+MY+ AG WE+ A+VRK
Sbjct: 633 NSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRK 692

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
           +M+SRG+RKE GC+W+E   ++H F+ EDR HP   +IY+++  +M  IK  GY+P    
Sbjct: 693 VMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKREGYIPVTQN 752

Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
            LHNV E+ KE  ++YHSEKLA+A+G+L+LP GAPIRIFKNLRVCGDCH+A K+IS V  
Sbjct: 753 VLHNVGEQEKEEAISYHSEKLAIAYGVLSLPSGAPIRIFKNLRVCGDCHSASKFISKVTG 812

Query: 785 RHIILRDSNRFHHFKAGNCSCGDYW 809
           R II RD++RFHHFK G CSCGDYW
Sbjct: 813 REIIARDASRFHHFKNGVCSCGDYW 837



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 160/609 (26%), Positives = 288/609 (47%), Gaps = 43/609 (7%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           +  ALV  +   G +D A Q+F+ +  RD  T+N MI  YA SG   + +K         
Sbjct: 199 IGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSG---DGEK--------- 246

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                              AF+LF++MQ EG++P++ +  ++L  CS    L  G+  H 
Sbjct: 247 -------------------AFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHA 287

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
             + T    +  V T L+ MY  C  I  A  +F      ++ V+WT MI GY++N    
Sbjct: 288 QCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKV-RDVVSWTVMIRGYAENSNIE 346

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
            A   F  M+ EG++ ++ T+  I+ ACA+ +      ++H  ++ +GF  ++ V +AL+
Sbjct: 347 DAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALV 406

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
            MYAKCG +  AR++ +     + VSW++MI  +   G  +EA   F  M   +++ D  
Sbjct: 407 HMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVV 466

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           TY ++LN       L+    +++  +K     +  V NALI+M  K G+++ A  +F  M
Sbjct: 467 TYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENM 526

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
             +DV++W  +I G + HG+  EAL  F  M      P+ V    +LSAC+    +E G+
Sbjct: 527 VQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGR 586

Query: 458 QVHAVFLKSGG-CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQ 515
           +  +  L   G   ++ +   +V +  + G +++A  + + M  + +   W+ L+  C  
Sbjct: 587 RFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRI 646

Query: 516 NGKGKEALQFYDQMLARGTKP-DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
            G    A +  ++ L   ++P D   +V L    + AG+ EN     + M+   G++   
Sbjct: 647 YGNLDVAERAAERCLM--SEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMES-RGVR--K 701

Query: 575 DHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFE 634
           +     I++ G+    +       Q  GE  A + + L++A +  G + + +   +N+ E
Sbjct: 702 EQGCTWIEVEGKLHTFVVEDRSHPQ-AGEIYAELAR-LMTAIKREGYIPVTQNVLHNVGE 759

Query: 635 LEPMNAMPY 643
            E   A+ Y
Sbjct: 760 QEKEEAISY 768



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 208/418 (49%), Gaps = 13/418 (3%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           T+  +   C  +     G QV   I+ SG + N+Y  + LI +++ CG++  AR+  +  
Sbjct: 63  TYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSV 122

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
           E    V+WN++I G+A+ G  KEA +LF++M    ++    T+  VL+  +S   L   K
Sbjct: 123 ENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGK 182

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
             H+ ++K GF     +  AL+ MY K G++D A  VF+ +  +DV ++  +I G A  G
Sbjct: 183 EFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSG 242

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
             E+A + F  M+  G  P+ +   SIL  C+    L +G+ VHA  + +G    + V  
Sbjct: 243 DGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVAT 302

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           +L+ +Y  CG I  A RVFD M  RDV++WT +I G A+N   ++A   +  M   G +P
Sbjct: 303 ALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQP 362

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY--ACMIDLLGRSGKLIEAK 594
           D IT++ ++ AC+ +     AR   E   +V     G D      ++ +  + G + +A+
Sbjct: 363 DRITYIHIINACASSADLSLAR---EIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDAR 419

Query: 595 ALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP----YVQLSN 648
            + D M    D   W A++ A   +G    GE A      ++  N  P    Y+ L N
Sbjct: 420 QVFDAM-SRRDVVSWSAMIGAYVENG---CGEEAFETFHLMKRNNVEPDVVTYINLLN 473



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 165/377 (43%), Gaps = 44/377 (11%)

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
           ID  TY  +        D    K V   I+++G +   +  N LI +++  GN+  A   
Sbjct: 59  IDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQT 118

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           F+ +++K V++W ++I G A  G  +EA   F  M    + P  +    +L AC+    L
Sbjct: 119 FDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGL 178

Query: 454 EFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC 513
           + G++ HA  +K G  S   +  +LV +Y K G ++ A +VFD ++ RDV T+  +I G 
Sbjct: 179 KLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGY 238

Query: 514 AQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS-----------HA----------- 551
           A++G G++A Q + +M   G KP+ I+F+ +L  CS           HA           
Sbjct: 239 AKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDV 298

Query: 552 -------------GLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLD 598
                        G  E AR  F+ M KV  +      +  MI     +  + +A  L  
Sbjct: 299 RVATALIRMYMGCGSIEGARRVFDKM-KVRDVVS----WTVMIRGYAENSNIEDAFGLFA 353

Query: 599 QMVGE---PDATVWKALLSACRVHGDLELGERAANNLFELE-PMNAMPYVQLSNMYSTAG 654
            M  E   PD   +  +++AC    DL L     + +       + +    L +MY+  G
Sbjct: 354 TMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCG 413

Query: 655 KWEDAARVRKLMKSRGI 671
             +DA +V   M  R +
Sbjct: 414 AIKDARQVFDAMSRRDV 430



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 104/288 (36%), Gaps = 74/288 (25%)

Query: 20  IGPARYTHNVGNSVKPASDLNRALVDFS-NSGEIDEAGQLFEKMSDRDGFTWNTMIAAYA 78
           +G   YT  +   +     +  AL++ +   G I+ A  +FE M  RD  TWN MI  Y+
Sbjct: 483 LGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYS 542

Query: 79  NSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDN 138
             G  R                               EA +LF +M  E +RP+  T   
Sbjct: 543 LHGNAR-------------------------------EALDLFDRMLKERFRPNSVTFVG 571

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG-LVDMYAKCKCIFEAEYLFKMFPDG 197
           VL  CS  G ++ G +F  Y +     +    + G +VD+  +   + EAE L    P  
Sbjct: 572 VLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLK 631

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ- 256
            N   W+T+                                   L AC      D   + 
Sbjct: 632 PNSSIWSTL-----------------------------------LAACRIYGNLDVAERA 656

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCG---DLDSARRLLEYSEIDNE 301
              C++S  ++  VYVQ  L  MYA  G   ++   R+++E   +  E
Sbjct: 657 AERCLMSEPYDGAVYVQ--LSHMYAAAGMWENVAKVRKVMESRGVRKE 702


>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  612 bits (1578), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 312/750 (41%), Positives = 453/750 (60%), Gaps = 7/750 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNE----TPFKNFFTWSSLIYGYSNYGLDIEAFELF 121
           D F  N ++A Y   G + EA+++F+E       +N  +W+++I  Y       +A  +F
Sbjct: 134 DVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVF 193

Query: 122 WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
            +M   G RP+++    V+  C+    L+ G Q HG  ++T ++ + F    LVDMY+K 
Sbjct: 194 REMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKL 253

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
             I  A  +F+  P   + V+W   I+G   +G+  +A+E    M+  G+  N FT  S+
Sbjct: 254 GDIEMAATVFEKMP-AADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSV 312

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           L ACA   A + G Q+HG ++ +  + + +V   L+DMYAK G LD AR++ ++    + 
Sbjct: 313 LKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDL 372

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHAR--DIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           + WN++I G +  G H E LSLF +M     D+ ++  T  SVL   AS+  + + + VH
Sbjct: 373 ILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVH 432

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
           +L  K G      V N LID Y K G LD A  VF   +  D+IS T+++T  +     E
Sbjct: 433 ALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGE 492

Query: 420 EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
           +A+K F  M   G+ PD  V+SS+L+AC  L+  E G+QVHA  +K    S +   N+LV
Sbjct: 493 DAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALV 552

Query: 480 LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
             YAKCG I DA+  F  +  R +++W+A+I G AQ+G GK AL  + +ML  G  P++I
Sbjct: 553 YAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHI 612

Query: 540 TFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ 599
           T   +L AC+HAGL ++A+ YFESM + +GI    +HYACMID+LGR+GKL +A  L++ 
Sbjct: 613 TLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNN 672

Query: 600 MVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDA 659
           M  + +A VW ALL A RVH D ELG  AA  LF LEP  +  +V L+N Y++AG W++ 
Sbjct: 673 MPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEM 732

Query: 660 ARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYV 719
           A+VRKLMK   ++KEP  SWVE   +VH FI  D+ HP+  DIY K+ E+  L+ +AGYV
Sbjct: 733 AKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTRDIYGKLAELGDLMNKAGYV 792

Query: 720 PDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYI 779
           P++   LH+V+   KE+ L++HSE+LAVAF L++ P GAPIR+ KNLR+C DCH A KYI
Sbjct: 793 PNVEVDLHDVDRSEKELLLSHHSERLAVAFALISTPSGAPIRVKKNLRICRDCHVAFKYI 852

Query: 780 SAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           S +  R II+RD NRFHHF  G CSCGDYW
Sbjct: 853 SKIVSREIIIRDINRFHHFTNGTCSCGDYW 882



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 194/633 (30%), Positives = 306/633 (48%), Gaps = 44/633 (6%)

Query: 67  GFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL 126
           GF+ N ++  Y+       A+ +F+E P     +WSSL+  YSN G+  +A   F  M+ 
Sbjct: 38  GFS-NHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRG 96

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
            G   +++ L  VL+ C+    ++ G Q H  A+ T    + FV   LV +Y     + E
Sbjct: 97  RGVPCNEFALPVVLK-CAPD--VRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDE 153

Query: 187 AEYLFKMF---PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           A  +F  +      +N V+W TMI+ Y +N     AI  FR+M   G   N+F F  ++ 
Sbjct: 154 ARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVN 213

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC      + G QVHG ++ +G+E +V+  +AL+DMY+K GD++ A  + E     + VS
Sbjct: 214 ACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVS 273

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN+ I G    G    AL L  +M +  +  + FT  SVL   A     N  + +H  +V
Sbjct: 274 WNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMV 333

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K   +  +FV   L+DMYAK G LD A  VF+ M  +D+I W +LI+GC++ G + E L 
Sbjct: 334 KAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLS 393

Query: 424 YFSDMRISGICPD--HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
            F  MR  G+  D     ++S+L + A    +   +QVHA+  K G  S   V N L+  
Sbjct: 394 LFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDS 453

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           Y KCG ++ A +VF    + D+I+ T ++   +Q   G++A++ + QML +G +PD    
Sbjct: 454 YWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVL 513

Query: 542 VGLLFACS-----------HAGL----------AENARWY-------FESMDKVYGIKP- 572
             LL AC+           HA L          A NA  Y        E  D  +   P 
Sbjct: 514 SSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPE 573

Query: 573 -GPDHYACMIDLLGRSGKLIEAKALLDQMVGE---PDATVWKALLSACRVHGDLELGERA 628
            G   ++ MI  L + G    A  L  +M+ E   P+     ++LSAC   G ++  ++ 
Sbjct: 574 RGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKY 633

Query: 629 ANNLFELEPMNAMP--YVQLSNMYSTAGKWEDA 659
             ++ E   ++     Y  + ++   AGK EDA
Sbjct: 634 FESMKETFGIDRTEEHYACMIDILGRAGKLEDA 666



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 172/565 (30%), Positives = 271/565 (47%), Gaps = 56/565 (9%)

Query: 152 GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYS 211
           G   H + +K+   L A     L+ +Y++C+    A  +F   PD   HV+W++++T YS
Sbjct: 23  GAHLHSHLLKS--GLLAGFSNHLLTLYSRCRLPSAARAVFDEIPD-PCHVSWSSLVTAYS 79

Query: 212 QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVY 271
            NG    A+  FR MR  GV  N+F  P +L     V    FGAQVH   +++    +V+
Sbjct: 80  NNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDVR---FGAQVHALAVATRLVHDVF 136

Query: 272 VQSALIDMYAKCGDLDSARRLL-EYSEID---NEVSWNSMIVGFARQGFHKEALSLFKKM 327
           V +AL+ +Y   G +D ARR+  EY  +    N VSWN+MI  + +     +A+ +F++M
Sbjct: 137 VANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREM 196

Query: 328 HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL 387
                + ++F +  V+N    + DL   + VH  +V+TG+E   F  NAL+DMY+K G++
Sbjct: 197 VWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDI 256

Query: 388 DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSAC 447
           + A  VF  M   DV+SW + I+GC  HG    AL+    M+ SG+ P+   +SS+L AC
Sbjct: 257 EMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKAC 316

Query: 448 AELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWT 507
           A       G+Q+H   +K+       V   LV +YAK G ++DA +VFD M  RD+I W 
Sbjct: 317 AGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWN 376

Query: 508 ALIMGCAQNGKGKEALQFYDQMLARGTKPDY--ITFVGLLFACSHAGLAENARWYFESMD 565
           ALI GC+ +G+  E L  + +M   G   D    T   +L + + +    + R      +
Sbjct: 377 ALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAE 436

Query: 566 KVYGI--------------KPGPDHYACMIDLLGRSGKLIEAKALLD------------- 598
           K+  +              K G   YA  +    RS  +I +  ++              
Sbjct: 437 KIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIK 496

Query: 599 ---QMVG---EPDATVWKALLSACRVHGDLELGERAANNLFELE------PMNAMPYVQL 646
              QM+    EPD+ V  +LL+AC      E G++   +L + +        NA+ Y   
Sbjct: 497 LFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYA-- 554

Query: 647 SNMYSTAGKWEDAARVRKLMKSRGI 671
              Y+  G  EDA      +  RGI
Sbjct: 555 ---YAKCGSIEDADMAFSGLPERGI 576



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 135/459 (29%), Positives = 238/459 (51%), Gaps = 5/459 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G +     ++D FT N ++  Y+  G +  A  +F + P  +  +W++ I G   +G D 
Sbjct: 229 GAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDH 288

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
            A EL  QM+  G  P+ +TL +VL+ C+  G    G Q HG+ +K   D + FV  GLV
Sbjct: 289 RALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLV 348

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG--VES 233
           DMYAK   + +A  +F   P  ++ + W  +I+G S +G   + +  F  MR EG  ++ 
Sbjct: 349 DMYAKHGFLDDARKVFDFMPR-RDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDV 407

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
           N+ T  S+L + A+  A     QVH      G  ++ +V + LID Y KCG LD A ++ 
Sbjct: 408 NRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVF 467

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
           + S  D+ +S  +M+   ++    ++A+ LF +M  + ++ D F   S+LN   S     
Sbjct: 468 KESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYE 527

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
             K VH+ ++K  F    F  NAL+  YAK G+++ A M F+ + ++ ++SW+++I G A
Sbjct: 528 QGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLA 587

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
            HG  + AL  F  M   G+ P+H+ ++S+LSAC    +++  ++      ++ G     
Sbjct: 588 QHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTE 647

Query: 474 VDNS-LVLVYAKCGCINDANRVFDSMHTR-DVITWTALI 510
              + ++ +  + G + DA  + ++M  + +   W AL+
Sbjct: 648 EHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALL 686



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 185/370 (50%), Gaps = 9/370 (2%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G + + ++D D F    ++  YA  G L +A+K+F+  P ++   W++LI G S+ G   
Sbjct: 330 GFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHG 389

Query: 116 EAFELFWQMQLEG--YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG 173
           E   LF +M+ EG     ++ TL +VL+  +    +    Q H  A K     ++ V+ G
Sbjct: 390 EVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVING 449

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNH--VAWTTMITGYSQNGYGFKAIECFRDMRVEGV 231
           L+D Y KC    + +Y  K+F + ++   ++ TTM+T  SQ  +G  AI+ F  M  +G+
Sbjct: 450 LIDSYWKCG---QLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGL 506

Query: 232 ESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR 291
           E + F   S+L AC ++SA + G QVH  ++   F ++V+  +AL+  YAKCG ++ A  
Sbjct: 507 EPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADM 566

Query: 292 LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNI 350
                     VSW++MI G A+ G  K AL LF +M    +  +  T  SVL+ C  + +
Sbjct: 567 AFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGL 626

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLI 409
             +  K   S+    G +  +     +ID+  + G L+ A  +V N+    +   W +L+
Sbjct: 627 VDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALL 686

Query: 410 TGCAYHGSYE 419
                H   E
Sbjct: 687 GASRVHRDPE 696


>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score =  612 bits (1577), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 296/741 (39%), Positives = 472/741 (63%), Gaps = 7/741 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
            +++  Y  +  + + +++F+E   KN  +W+SL+ GY   GL+ +A +LF QMQLEG +
Sbjct: 131 TSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIK 190

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+ +T   VL   +  G +++G Q H   IK+  D   FV   +V+MY+K   + +A+ +
Sbjct: 191 PNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAV 250

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F    + +N V+W +MI G+  NG   +A E F  MR+EGV+  Q  F +++  CA +  
Sbjct: 251 FDSM-ENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKE 309

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL-EYSEIDNEVSWNSMIV 309
             F  Q+H  ++ +G + ++ +++AL+  Y+KC ++D A +L      + N VSW ++I 
Sbjct: 310 MSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIIS 369

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           G+ + G    A++LF +M    ++ + FTY ++L   A+     +   +H+L+VKT +E 
Sbjct: 370 GYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAV----SPSQIHALVVKTNYEN 425

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
              V  AL D Y+K G+ + A  +F L+ +KD+++W+++++G A  G  E A+K F  + 
Sbjct: 426 SPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLA 485

Query: 430 ISGICPDHVVVSSILSACAELTV-LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
             G+ P+    SS+L+ACA  T  +E G+Q H+  +KSG  ++L V ++LV +YAK G I
Sbjct: 486 KEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNI 545

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
             AN VF     RD+++W ++I G AQ+G GK++L+ +++M ++  + D ITF+G++ AC
Sbjct: 546 ESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISAC 605

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           +HAGL    + YF+ M K Y I P  +HY+CM+DL  R+G L +A  L+++M     AT+
Sbjct: 606 THAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATI 665

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           W+ LL+ACRVH +++LGE AA  L  L+P ++  YV LSN+Y+TAG W++ A+VRKLM  
Sbjct: 666 WRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDM 725

Query: 669 RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHN 728
           + ++KE G SW+E  ++   F++ D  HP    IY K++E+ + +K+AGY PD  + LH+
Sbjct: 726 KKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHD 785

Query: 729 VEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHII 788
           VEEE KE+ L+ HSE+LA+AFGL+  P G PI+I KNLRVCGDCHT +K IS +  R I+
Sbjct: 786 VEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIV 845

Query: 789 LRDSNRFHHFKAGNCSCGDYW 809
           +RDSNRFHHFK G+CSCGDYW
Sbjct: 846 VRDSNRFHHFKGGSCSCGDYW 866



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 165/542 (30%), Positives = 291/542 (53%), Gaps = 19/542 (3%)

Query: 86  AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL 145
           +++LF+ETP +     + L++ +S    + EA  LF  ++  G      +L  VL++C  
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104

Query: 146 KGLLQR--GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAW 203
             L  R  G+Q H   IK  F  +  V T LVDMY K + + + E +F      KN V+W
Sbjct: 105 --LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEM-RVKNVVSW 161

Query: 204 TTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS 263
           T+++ GY QNG   +A++ F  M++EG++ N FTF ++L   AA  A + G QVH  ++ 
Sbjct: 162 TSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIK 221

Query: 264 SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSL 323
           SG ++ ++V +++++MY+K   +  A+ + +  E  N VSWNSMI GF   G   EA  L
Sbjct: 222 SGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFEL 281

Query: 324 FKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK 383
           F +M    +K+    + +V+   A+  +++ AK +H  ++K G +    +  AL+  Y+K
Sbjct: 282 FYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSK 341

Query: 384 QGNLDCAFMVFNLMQD-KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
              +D AF +F +M   ++V+SWT++I+G   +G  + A+  F  MR  G+ P+H   S+
Sbjct: 342 CSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYST 401

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
           IL+A A ++      Q+HA+ +K+   +S SV  +L   Y+K G  N+A ++F+ +  +D
Sbjct: 402 ILTANAAVS----PSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKD 457

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
           ++ W+A++ G AQ G  + A++ + Q+   G +P+  TF  +L AC+    +      F 
Sbjct: 458 IVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFH 517

Query: 563 SMDKVYGIKPGPDHYAC----MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRV 618
           S      IK G  +  C    ++ +  + G +  A  +  + V + D   W +++S    
Sbjct: 518 SCS----IKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQV-DRDLVSWNSMISGYAQ 572

Query: 619 HG 620
           HG
Sbjct: 573 HG 574



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 151/453 (33%), Positives = 255/453 (56%), Gaps = 7/453 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D   F  N+M+  Y+ S  + +AK +F+    +N  +W+S+I G+   GLD+EAFELF++
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYR 284

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+LEG + +Q     V++LC+    +   +Q H   IK   D +  + T L+  Y+KC  
Sbjct: 285 MRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSE 344

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I +A  LF M    +N V+WT +I+GY QNG   +A+  F  MR EGV  N FT+ +ILT
Sbjct: 345 IDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILT 404

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           A AAVS     +Q+H  ++ + +E +  V +AL D Y+K GD + A ++ E  +  + V+
Sbjct: 405 ANAAVSP----SQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVA 460

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLI 362
           W++M+ G+A+ G  + A+ +F ++    ++ ++FT+ SVLN C A    +   K  HS  
Sbjct: 461 WSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCS 520

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           +K+GF     V++AL+ MYAK+GN++ A  VF    D+D++SW S+I+G A HG  +++L
Sbjct: 521 IKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSL 580

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG-CSSLSVDNSLVLV 481
           K F +MR   +  D +    ++SAC    ++  GQ+   + +K      ++   + +V +
Sbjct: 581 KIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDL 640

Query: 482 YAKCGCINDANRVFDSM-HTRDVITWTALIMGC 513
           Y++ G +  A  + + M        W  L+  C
Sbjct: 641 YSRAGMLEKAMDLINKMPFPAGATIWRTLLAAC 673



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 221/415 (53%), Gaps = 7/415 (1%)

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
           +S+N    +A+  F  +R  G  ++  +   +L  C  +  R  G QVH   +  GF  +
Sbjct: 67  FSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVED 126

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA 329
           V V ++L+DMY K   ++   R+ +   + N VSW S++ G+ + G +++AL LF +M  
Sbjct: 127 VSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQL 186

Query: 330 RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDC 389
             IK + FT+ +VL   A++  +     VH++++K+G +   FV N++++MY+K   +  
Sbjct: 187 EGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSD 246

Query: 390 AFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE 449
           A  VF+ M++++ +SW S+I G   +G   EA + F  MR+ G+     + ++++  CA 
Sbjct: 247 AKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCAN 306

Query: 450 LTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH-TRDVITWTA 508
           +  + F +Q+H   +K+G    L++  +L++ Y+KC  I+DA ++F  MH  ++V++WTA
Sbjct: 307 IKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTA 366

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
           +I G  QNG+   A+  + QM   G +P++ T+  +L A +    ++       ++    
Sbjct: 367 IISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSPSQ-----IHALVVKT 421

Query: 569 GIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
             +  P     + D   + G   EA  +  +++ E D   W A+LS     GD+E
Sbjct: 422 NYENSPSVGTALSDSYSKIGDANEAAKIF-ELIDEKDIVAWSAMLSGYAQMGDIE 475



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 134/269 (49%), Gaps = 37/269 (13%)

Query: 29  VGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAK 87
           V  + + +  +  AL D +S  G+ +EA ++FE + ++D   W+ M++ YA  G      
Sbjct: 419 VKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMG------ 472

Query: 88  KLFNETPFKNFFTWSSLIYGYSNYGLDIE-AFELFWQMQLEGYRPSQYTLDNVLRLCSL- 145
                                     DIE A ++F Q+  EG  P+++T  +VL  C+  
Sbjct: 473 --------------------------DIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAP 506

Query: 146 KGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTT 205
              +++G+QFH  +IK+ F     V + LV MYAK   I  A  +FK   D ++ V+W +
Sbjct: 507 TASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVD-RDLVSWNS 565

Query: 206 MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS- 264
           MI+GY+Q+G G K+++ F +MR + +E +  TF  +++AC      + G +    ++   
Sbjct: 566 MISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDY 625

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLL 293
                +   S ++D+Y++ G L+ A  L+
Sbjct: 626 HIVPTMEHYSCMVDLYSRAGMLEKAMDLI 654


>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 303/744 (40%), Positives = 454/744 (61%), Gaps = 1/744 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           + F  N ++  Y+  G L  A+++F++   ++  +++SLI G +  G    A +LF +MQ
Sbjct: 247 ETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQ 306

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           L+  +P   T+ ++L  C+  G   +G+Q H Y IK     +  +   L+D+Y KC  I 
Sbjct: 307 LDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIE 366

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A   F +  + +N V W  M+  Y Q G   ++   F  M++EG+  NQ+T+PSIL  C
Sbjct: 367 TAHEYF-LTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTC 425

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
            ++ A D G Q+H  ++ SGF+ NVYV S LIDMYAK G+LD+AR +L+    ++ VSW 
Sbjct: 426 TSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWT 485

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +MI G+ +     EAL LF++M  + I+ D+  + S ++  A    LN  + +H+    +
Sbjct: 486 AMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYIS 545

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G+     + NAL+ +YA+ G    A++ F  +  KD ISW +LI+G A  G  EEAL+ F
Sbjct: 546 GYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVF 605

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
           S M  +G+  +     S +SA A    ++ G+Q+HA+ +K+G  S     N L+ +Y+KC
Sbjct: 606 SQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKC 665

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G I DA R F  M  ++V++W A+I G +Q+G G EA+  +++M   G  P+++TFVG+L
Sbjct: 666 GSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVL 725

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
            ACSH GL      YF SM K +G+ P P+HY C++DLLGR+  L  A+  +++M  EPD
Sbjct: 726 SACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPD 785

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
           A +W+ LLSAC VH ++E+GE AA +L ELEP ++  YV LSNMY+ +GKW+   R R++
Sbjct: 786 AMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQM 845

Query: 666 MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFA 725
           MK RG++KEPG SW+E  + +H F   DR HPL   IY  ID++     E GYV D    
Sbjct: 846 MKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNERAGEIGYVQDRYNL 905

Query: 726 LHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLR 785
           L++VE+E K+     HSEKLAVAFGLL+L    PIR+ KNLRVC DCH  +K++S +  R
Sbjct: 906 LNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCNDCHNWIKFVSKISNR 965

Query: 786 HIILRDSNRFHHFKAGNCSCGDYW 809
            I++RD+ RFHHF+ G CSC DYW
Sbjct: 966 AIVVRDAYRFHHFEGGVCSCKDYW 989



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 174/588 (29%), Positives = 281/588 (47%), Gaps = 22/588 (3%)

Query: 48  NSGEIDEAGQL----FEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSS 103
           NSG + +A +L    F+   D +    + +I  Y   G +  A KLF++ P  N   W+ 
Sbjct: 22  NSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNK 81

Query: 104 LIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL-KGLLQRGEQFHGYAIKT 162
           +I G     L  +   LF  M  E   P + T  +VLR CS  K   Q  EQ H   I  
Sbjct: 82  VISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHH 141

Query: 163 CFDLNAFVVTGLVDMYAK------CKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
            F  +  V   L+D+Y+K       K +FE  +L       K+ V+W  MI+G SQNG  
Sbjct: 142 GFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFL-------KDSVSWVAMISGLSQNGRE 194

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
            +AI  F  M    V    + F S+L+AC  +     G Q+HG I+  G  +  +V +AL
Sbjct: 195 DEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNAL 254

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           + +Y++ G+L +A ++       + +S+NS+I G A++GF   AL LF+KM    +K D 
Sbjct: 255 VTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDC 314

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
            T  S+L+  AS       K +HS ++K G      +  +L+D+Y K  +++ A   F  
Sbjct: 315 VTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLT 374

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
            + ++V+ W  ++      G+  E+   F  M+I G+ P+     SIL  C  L  L+ G
Sbjct: 375 TETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLG 434

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
           +Q+H   +KSG   ++ V + L+ +YAK G ++ A  +   +   DV++WTA+I G  Q+
Sbjct: 435 EQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQH 494

Query: 517 GKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGL-AENARWYFESMDKVYGIKPGPD 575
               EAL+ + +M  +G + D I F   + AC  AG+ A N      +   + G      
Sbjct: 495 DLFAEALKLFQEMENQGIRSDNIGFSSAISAC--AGIQALNQGQQIHAQSYISGYSEDLS 552

Query: 576 HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
               ++ L  R G+  +A    ++ +   D   W AL+S     G  E
Sbjct: 553 IGNALVSLYARCGRAQDAYLAFEK-IDAKDNISWNALISGFAQSGHCE 599



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 230/490 (46%), Gaps = 40/490 (8%)

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M   G+ +N  T+  +   C    +     ++H  I  SGF+    + S LID+Y   G+
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN- 344
           +D+A +L +     N   WN +I G   +    + L LF  M   ++  D+ T+ SVL  
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
           C          + +H+ I+  GF     V N LID+Y+K G++D A +VF  +  KD +S
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180

Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
           W ++I+G + +G  +EA+  F  M  S + P   V SS+LSAC ++ + + G+Q+H   +
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIV 240

Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ 524
           K G  S   V N+LV +Y++ G +  A ++F  MH RD I++ +LI G AQ G    ALQ
Sbjct: 241 KWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQ 300

Query: 525 FYDQMLARGTKPDYITFVGLLFACSHAGLAENARW---YFESMD---------------- 565
            +++M     KPD +T   LL AC+  G     +    Y   M                 
Sbjct: 301 LFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYV 360

Query: 566 KVYGIKPGPDHYA-----------CMIDLLGRSGKLIEAKALLDQMVGE---PDATVWKA 611
           K + I+   +++             M+   G+ G L E+  +  QM  E   P+   + +
Sbjct: 361 KCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPS 420

Query: 612 LLSACRVHGDLELGERAANNLFELE-PMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRG 670
           +L  C   G L+LGE+    + +     N      L +MY+  G+ + A   R +++   
Sbjct: 421 ILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTA---RGILQR-- 475

Query: 671 IRKEPGCSWV 680
           +R+E   SW 
Sbjct: 476 LREEDVVSWT 485



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 47/279 (16%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           +  ALV  ++  G   +A   FEK+  +D  +WN +I+ +A SG   EA ++F+      
Sbjct: 553 IGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFS------ 606

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                                    QM   G   + +T  + +   +    +++G+Q H 
Sbjct: 607 -------------------------QMNQAGVEANLFTFGSAVSATANTANIKQGKQIHA 641

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
             IKT +D        L+ +Y+KC  I +A+  F   P+ KN V+W  MITGYSQ+GYG 
Sbjct: 642 MMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPE-KNVVSWNAMITGYSQHGYGS 700

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG-------AQVHGCILSSGFEANV 270
           +A+  F +M+  G+  N  TF  +L+AC+ V   + G       ++ HG +     +   
Sbjct: 701 EAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVP----KPEH 756

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
           YV   ++D+  +   L  AR  +E   I+ + + W +++
Sbjct: 757 YV--CVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLL 793


>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 297/739 (40%), Positives = 453/739 (61%), Gaps = 1/739 (0%)

Query: 71   NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
            N++I+ YA  G L  A++LFN  P ++  +W+++I GY+      EA +L+ QMQ EG +
Sbjct: 424  NSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVK 483

Query: 131  PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            P + T  ++L  C+       G+  H   +++    N  +   L++MY +C  I EA+ +
Sbjct: 484  PGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNV 543

Query: 191  FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
            F+     ++ ++W +MI G++Q+G    A + F +M+ EG+E ++ TF S+L  C    A
Sbjct: 544  FE-GTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEA 602

Query: 251  RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
             + G Q+H  I+ SG + +V + +ALI+MY +CG L  A  +       N +SW +MI G
Sbjct: 603  LELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGG 662

Query: 311  FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
            FA QG  ++A  LF +M     K    T+ S+L    S+  L+  K V + I+ +G+E  
Sbjct: 663  FADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELD 722

Query: 371  KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
              V NALI  Y+K G++  A  VF+ M ++D++SW  +I G A +G    AL++   M+ 
Sbjct: 723  TGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQE 782

Query: 431  SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
             G+  +     SIL+AC+  + LE G++VHA  +K      + V  +L+ +YAKCG + +
Sbjct: 783  QGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEE 842

Query: 491  ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
            A  VFD+   ++V+TW A+I   AQ+G   +AL F++ M   G KPD  TF  +L AC+H
Sbjct: 843  AQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNH 902

Query: 551  AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
            +GL       F S++  +G+ P  +HY C++ LLGR+G+  EA+ L++QM   PDA VW+
Sbjct: 903  SGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWE 962

Query: 611  ALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRG 670
             LL ACR+HG++ L E AANN  +L   N   YV LSN+Y+ AG+W+D A++R++M+ RG
Sbjct: 963  TLLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRG 1022

Query: 671  IRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVE 730
            IRKEPG SW+E ++ +H FI+ DR HP   +IY ++  + L ++ AGY PD  + LHN++
Sbjct: 1023 IRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEMERAGYSPDTQYVLHNLD 1082

Query: 731  EEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILR 790
            +E +E  L  HSE+LA+A+GLL  P G PIRIFKNLR+CGDCHTA K+IS +  R II R
Sbjct: 1083 KEHQETSLCTHSERLAIAYGLLKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIAR 1142

Query: 791  DSNRFHHFKAGNCSCGDYW 809
            DSNRFH FK G CSC D+W
Sbjct: 1143 DSNRFHTFKNGKCSCEDFW 1161



 Score =  299 bits (765), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 180/621 (28%), Positives = 324/621 (52%), Gaps = 12/621 (1%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
           ++ E    RD    N+++  Y     L  A+++F+    ++  ++++++  Y+      E
Sbjct: 208 KIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEE 267

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
              LF QM  EG  P + T  N+L   +   +L  G++ H  A+    + +  V T L  
Sbjct: 268 CIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALAT 327

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           M+ +C  +  A+   + F D ++ V +  +I   +Q+G+  +A E +  MR +GV  N+ 
Sbjct: 328 MFVRCGDVAGAKQALEAFAD-RDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRT 386

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           T+ S+L AC+   A   G  +H  I   G  ++V + ++LI MYA+CGDL  AR L    
Sbjct: 387 TYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTM 446

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              + +SWN++I G+AR+    EA+ L+K+M +  +K    T+  +L+   ++   ++ K
Sbjct: 447 PKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGK 506

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H  I+++G +    + NAL++MY + G++  A  VF   + +D+ISW S+I G A HG
Sbjct: 507 MIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHG 566

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
           SYE A K F +M+  G+ PD +  +S+L  C     LE G+Q+H + ++SG    +++ N
Sbjct: 567 SYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGN 626

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           +L+ +Y +CG + DA  VF S+  R+V++WTA+I G A  G+ ++A + + QM   G KP
Sbjct: 627 ALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKP 686

Query: 537 DYITFVGLLFAC-SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
              TF  +L AC S A L E  +     ++  Y +  G  +   +I    +SG + +A+ 
Sbjct: 687 VKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGN--ALISAYSKSGSMTDARK 744

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEP----MNAMPYVQLSNMYS 651
           + D+M    D   W  +++    +G   LG  A    ++++     +N   +V + N  S
Sbjct: 745 VFDKMPNR-DIMSWNKMIAGYAQNG---LGGTALQFAYQMQEQGVVLNKFSFVSILNACS 800

Query: 652 TAGKWEDAARVRKLMKSRGIR 672
           +    E+  RV   +  R ++
Sbjct: 801 SFSALEEGKRVHAEIVKRKMQ 821



 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 154/503 (30%), Positives = 267/503 (53%), Gaps = 1/503 (0%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            Q+ E     D F  N +I  Y     + +A ++F + P ++  +W+SLI  Y+  G   
Sbjct: 106 AQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKK 165

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           +AF+LF +MQ  G+ PS+ T  ++L  C     L+ G++ H   I+  +  +  V   L+
Sbjct: 166 KAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLL 225

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           +MY KC+ +  A  +F      ++ V++ TM+  Y+Q  Y  + I  F  M  EG+  ++
Sbjct: 226 NMYGKCEDLPSARQVFSGIYR-RDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDK 284

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            T+ ++L A    S  D G ++H   ++ G  +++ V +AL  M+ +CGD+  A++ LE 
Sbjct: 285 VTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEA 344

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               + V +N++I   A+ G ++EA   + +M +  + ++  TY SVLN  +++  L   
Sbjct: 345 FADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAG 404

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           + +HS I + G      + N+LI MYA+ G+L  A  +FN M  +D+ISW ++I G A  
Sbjct: 405 ELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARR 464

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
               EA+K +  M+  G+ P  V    +LSAC   +    G+ +H   L+SG  S+  + 
Sbjct: 465 EDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLA 524

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           N+L+ +Y +CG I +A  VF+    RD+I+W ++I G AQ+G  + A + + +M   G +
Sbjct: 525 NALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLE 584

Query: 536 PDYITFVGLLFACSHAGLAENAR 558
           PD ITF  +L  C +    E  R
Sbjct: 585 PDKITFASVLVGCKNPEALELGR 607



 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 146/496 (29%), Positives = 270/496 (54%), Gaps = 7/496 (1%)

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           ++++ C+ K  L   ++ H   ++     + F+   L++MY KC+ + +A  +F   P  
Sbjct: 87  DLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPR- 145

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           ++ ++W ++I+ Y+Q G+  KA + F +M+  G   ++ T+ SILTAC + +  ++G ++
Sbjct: 146 RDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKI 205

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           H  I+ +G++ +  VQ++L++MY KC DL SAR++       + VS+N+M+  +A++ + 
Sbjct: 206 HSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYV 265

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
           +E + LF +M +  I  D  TY ++L+ F +   L+  K +H L V  G      V  AL
Sbjct: 266 EECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTAL 325

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
             M+ + G++  A        D+DV+ + +LI   A HG YEEA + +  MR  G+  + 
Sbjct: 326 ATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNR 385

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
               S+L+AC+    L  G+ +H+   + G  S + + NSL+ +YA+CG +  A  +F++
Sbjct: 386 TTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNT 445

Query: 498 MHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENA 557
           M  RD+I+W A+I G A+     EA++ Y QM + G KP  +TF+ LL AC+++    + 
Sbjct: 446 MPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDG 505

Query: 558 RWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACR 617
           +   E + +  GIK        ++++  R G ++EA+ + +      D   W ++++   
Sbjct: 506 KMIHEDILRS-GIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRAR-DIISWNSMIAGHA 563

Query: 618 VHGDLELGERAANNLF 633
            HG  E    AA  LF
Sbjct: 564 QHGSYE----AAYKLF 575



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 150/488 (30%), Positives = 238/488 (48%), Gaps = 35/488 (7%)

Query: 33  VKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN 91
           +K    L  AL++ +   G I EA  +FE    RD  +WN+MIA +A  G          
Sbjct: 517 IKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYE------- 569

Query: 92  ETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQR 151
                                    A++LF +M+ EG  P + T  +VL  C     L+ 
Sbjct: 570 ------------------------AAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALEL 605

Query: 152 GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYS 211
           G Q H   I++   L+  +   L++MY +C  + +A  +F      +N ++WT MI G++
Sbjct: 606 GRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRH-RNVMSWTAMIGGFA 664

Query: 212 QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVY 271
             G   KA E F  M+ +G +  + TF SIL AC + +  D G +V   IL+SG+E +  
Sbjct: 665 DQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTG 724

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD 331
           V +ALI  Y+K G +  AR++ +     + +SWN MI G+A+ G    AL    +M  + 
Sbjct: 725 VGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQG 784

Query: 332 IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
           + ++ F++ S+LN  +S   L   K VH+ IVK   +G   V  ALI MYAK G+L+ A 
Sbjct: 785 VVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQ 844

Query: 392 MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELT 451
            VF+   +K+V++W ++I   A HG   +AL +F+ M   GI PD    +SILSAC    
Sbjct: 845 EVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSG 904

Query: 452 VLEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAKCGCINDANRVFDSMH-TRDVITWTAL 509
           ++  G ++ +      G S ++     LV +  + G   +A  + + M    D   W  L
Sbjct: 905 LVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETL 964

Query: 510 IMGCAQNG 517
           +  C  +G
Sbjct: 965 LGACRIHG 972



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 195/388 (50%), Gaps = 8/388 (2%)

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
            E+N+  +  ++  C    +     ++H  ++ +G   ++++ + LI+MY KC  +  A 
Sbjct: 78  TETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAH 137

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
           ++       + +SWNS+I  +A+QGF K+A  LF++M          TY S+L    S  
Sbjct: 138 QVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPA 197

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           +L   K +HS I++ G++    V N+L++MY K  +L  A  VF+ +  +DV+S+ +++ 
Sbjct: 198 ELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLG 257

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
             A     EE +  F  M   GI PD V   ++L A    ++L+ G+++H + +  G  S
Sbjct: 258 LYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNS 317

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
            + V  +L  ++ +CG +  A +  ++   RDV+ + ALI   AQ+G  +EA + Y QM 
Sbjct: 318 DIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMR 377

Query: 531 ARGTKPDYITFVGLLFACSHA---GLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRS 587
           + G   +  T++ +L ACS +   G  E    +   +     ++ G      +I +  R 
Sbjct: 378 SDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNS----LISMYARC 433

Query: 588 GKLIEAKALLDQMVGEPDATVWKALLSA 615
           G L  A+ L + M  + D   W A+++ 
Sbjct: 434 GDLPRARELFNTMP-KRDLISWNAIIAG 460


>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 919

 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 311/754 (41%), Positives = 446/754 (59%), Gaps = 1/754 (0%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            Q++++ S  +    N +IA Y   G L  A+++F+E P+ +  T+++LI  ++  G   
Sbjct: 167 AQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGE 226

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
            A E+F +M+L G+ P   T+ ++L  C+  G L +G+Q H Y +K     +  +   L+
Sbjct: 227 SALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLL 286

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           D+Y KC  I EA  +FK   D  N V W  M+  Y Q     K+ + F  M   GV  N+
Sbjct: 287 DLYVKCGVIVEALEIFKS-GDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNE 345

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
           FT+P +L  C      + G Q+H   + +GFE+++YV   LIDMY+K G LD ARR+LE 
Sbjct: 346 FTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEV 405

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
            E  + VSW SMI G+ +  F KEAL  FK M    I  D+    S ++  A    +   
Sbjct: 406 LEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQG 465

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           + +HS +  +G+     + NAL+++YA+ G    AF +F  ++ KD I+W  +++G A  
Sbjct: 466 QQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQS 525

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G YEEAL+ F  M  +G+  +     S +SA A L  ++ G+Q+HA  +K+G  S   V 
Sbjct: 526 GLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVA 585

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           N+L+ +Y KCG I DA   F  M  R+ ++W  +I  C+Q+G G EAL  +DQM   G K
Sbjct: 586 NALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLK 645

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           P+ +TF+G+L ACSH GL E    YF+SM   +GI P PDHYAC++D+LGR+G+L  A+ 
Sbjct: 646 PNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARK 705

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
            +++M    +A VW+ LLSACRVH ++E+GE AA  L ELEP ++  YV LSN Y+  GK
Sbjct: 706 FVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGK 765

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
           W     VRK+MK RG+RKEPG SW+E  + VH F   DR HPL   IY  + ++   + +
Sbjct: 766 WACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDDRLAK 825

Query: 716 AGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
            GY+    F  H  E+E K+     HSEKLAVAFGL++LP   P+R+ KNLRVC DCHT 
Sbjct: 826 IGYIQGNYFLFHEKEKEQKDPTAFVHSEKLAVAFGLMSLPPSMPLRVIKNLRVCNDCHTW 885

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           MK+ S V  R I+LRD  RFHHF  GNCSCGD+W
Sbjct: 886 MKFTSEVMGREIVLRDVYRFHHFNNGNCSCGDFW 919



 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 173/555 (31%), Positives = 301/555 (54%), Gaps = 3/555 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D    N +I  YA  G ++ A+++F +   ++  +W +++ GY+  GL  EA  L+ QM 
Sbjct: 76  DRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMH 135

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G  P+ Y L +VL  C+   L ++G   H    K        V   L+ +Y +   + 
Sbjct: 136 CSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLS 195

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            AE +F   P   + V + T+I+ ++Q G G  A+E F +MR+ G   +  T  S+L AC
Sbjct: 196 LAERVFSEMPYC-DRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAAC 254

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A++   + G Q+H  +L +G   +  ++ +L+D+Y KCG +  A  + +  +  N V WN
Sbjct: 255 ASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWN 314

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
            M+V + +     ++  LF +M A  ++ ++FTYP +L       ++N  + +H L +KT
Sbjct: 315 LMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKT 374

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           GFE   +V+  LIDMY+K G LD A  +  +++ KDV+SWTS+I G   H   +EAL+ F
Sbjct: 375 GFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETF 434

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
            DM++ GI PD++ ++S +SACA +  +  GQQ+H+    SG  + +S+ N+LV +YA+C
Sbjct: 435 KDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARC 494

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G   +A  +F+++  +D ITW  ++ G AQ+G  +EAL+ + +M   G K +  TFV  +
Sbjct: 495 GRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSI 554

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
            A ++    +  +    ++ K  G     +    +I L G+ G + +AK    +M  E +
Sbjct: 555 SASANLADIKQGKQIHATVIKT-GCTSETEVANALISLYGKCGSIEDAKMQFFEM-SERN 612

Query: 606 ATVWKALLSACRVHG 620
              W  ++++C  HG
Sbjct: 613 HVSWNTIITSCSQHG 627



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 191/370 (51%), Gaps = 16/370 (4%)

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           +H   ++ G   +    + LID+YAK G +  ARR+ E     + VSW +M+ G+AR G 
Sbjct: 64  IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
            +EA+ L+ +MH   +    +   SVL+           + VH+ + K G      V NA
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNA 183

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           LI +Y + G+L  A  VF+ M   D +++ +LI+  A  G+ E AL+ F +MR+SG  PD
Sbjct: 184 LIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPD 243

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFD 496
            V ++S+L+ACA +  L  G+Q+H+  LK+G      ++ SL+ +Y KCG I +A  +F 
Sbjct: 244 CVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFK 303

Query: 497 SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG---L 553
           S    +V+ W  +++   Q     ++   + QM+A G +P+  T+  LL  C++AG   L
Sbjct: 304 SGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINL 363

Query: 554 AENARWYFESMDKVYGIKPG--PDHY--ACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
            E           +  IK G   D Y    +ID+  + G L +A+ +L+ +  + D   W
Sbjct: 364 GEQIH--------LLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAK-DVVSW 414

Query: 610 KALLSACRVH 619
            ++++    H
Sbjct: 415 TSMIAGYVQH 424



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 129/273 (47%), Gaps = 41/273 (15%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           ALV+ ++  G   EA  LFE +  +D  TWN M++ +A S                    
Sbjct: 486 ALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQS-------------------- 525

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
                      GL  EA E+F +M   G + + +T  + +   +    +++G+Q H   I
Sbjct: 526 -----------GLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVI 574

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAI 220
           KT       V   L+ +Y KC  I +A+  F    + +NHV+W T+IT  SQ+G+G +A+
Sbjct: 575 KTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSE-RNHVSWNTIITSCSQHGWGLEAL 633

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ----SAL 276
           + F  M+ EG++ N  TF  +L AC+ V   + G    G   S   E  ++ +    + +
Sbjct: 634 DLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGL---GYFKSMSSEHGIHPRPDHYACV 690

Query: 277 IDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
           +D+  + G LD AR+ +E   +  N + W +++
Sbjct: 691 VDILGRAGQLDRARKFVEEMPVSANAMVWRTLL 723



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 45/181 (24%)

Query: 37  SDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF 95
           +++  AL+  +   G I++A   F +MS+R+  +WNT+I +                   
Sbjct: 582 TEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITS------------------- 622

Query: 96  KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
                        S +G  +EA +LF QM+ EG +P+  T   VL  CS  GL++ G  +
Sbjct: 623 ------------CSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGY 670

Query: 156 -------HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
                  HG  I    D  A V    VD+  +   +  A    +  P   N + W T+++
Sbjct: 671 FKSMSSEHG--IHPRPDHYACV----VDILGRAGQLDRARKFVEEMPVSANAMVWRTLLS 724

Query: 209 G 209
            
Sbjct: 725 A 725


>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  605 bits (1561), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 312/744 (41%), Positives = 457/744 (61%), Gaps = 28/744 (3%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  NT++  YA      ++K+LF+E P +N  +W++L   Y       EA  LF++M 
Sbjct: 191 DVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMV 250

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           L G +P++++L +++  C+      RG+  HGY IK  +D + F    LVDMYAK   + 
Sbjct: 251 LSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLA 310

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A  +F+      + V+W  +I G   + +  +A+E    M+                  
Sbjct: 311 DAISVFEKIKQ-PDIVSWNAVIAGCVLHEHHEQALELLGQMK------------------ 351

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
                     Q+H  ++    E++++V   L+DMY+KC  L+ AR         + ++WN
Sbjct: 352 ---------RQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWN 402

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           ++I G+++     EALSLF +MH   I  +  T  ++L   A    ++  + VH L VK+
Sbjct: 403 AIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKS 462

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           GF    +V N+LID Y K  +++ A  +F      D++S+TS+IT  A +G  EEALK F
Sbjct: 463 GFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLF 522

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
            +M+   + PD  V SS+L+ACA L+  E G+Q+H   LK G    +   NSLV +YAKC
Sbjct: 523 LEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKC 582

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G I+DA R F  +  R +++W+A+I G AQ+G G++ALQ ++QML  G  P++IT V +L
Sbjct: 583 GSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVL 642

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
            AC+HAGL   A+ YFESM++++G KP  +HYACMIDLLGR+GK+ EA  L+++M  E +
Sbjct: 643 GACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEAN 702

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
           A+VW ALL A R+H D+ELG RAA  LF LEP  +  +V L+N+Y++AGKWE+ A VR+L
Sbjct: 703 ASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRL 762

Query: 666 MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFA 725
           M+   ++KEPG SW+E   +V+ F+  DR H    +IY+K+DE+  L+ +AGYVP +   
Sbjct: 763 MRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEID 822

Query: 726 LHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLR 785
           LH+VE+  KE+ L +HSEKLAVAFGL+  PQGAPIR+ KNLRVC DCHTA KYI  +  R
Sbjct: 823 LHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSR 882

Query: 786 HIILRDSNRFHHFKAGNCSCGDYW 809
            II+RD NRFHHFK G+CSCGDYW
Sbjct: 883 EIIVRDINRFHHFKDGSCSCGDYW 906



 Score =  275 bits (703), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 186/633 (29%), Positives = 311/633 (49%), Gaps = 67/633 (10%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +I  Y+       A+KL +E+   +  +WS+LI GY+  GL   A   F +M L G +
Sbjct: 95  NHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVK 154

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            +++T  +VL+ CS+   L+ G+Q HG  + + F+ + FV   LV MYAKC    +++ L
Sbjct: 155 CNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRL 214

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P+ +N V+W  + + Y Q  +  +A+  F +M + G++ N+F+  S++ AC  +  
Sbjct: 215 FDEIPE-RNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRD 273

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              G  +HG ++  G++ + +  +AL+DMYAK GDL  A  + E  +  + VSWN++I G
Sbjct: 274 SSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAG 333

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
                 H++AL L  +M                            + +HS ++K   E  
Sbjct: 334 CVLHEHHEQALELLGQM---------------------------KRQLHSSLMKMDMESD 366

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
            FV+  L+DMY+K   L+ A M FNL+ +KD+I+W ++I+G + +    EAL  F +M  
Sbjct: 367 LFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHK 426

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
            GI  +   +S+IL + A L V+   +QVH + +KSG  S + V NSL+  Y KC  + D
Sbjct: 427 EGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVED 486

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           A R+F+     D++++T++I   AQ G+G+EAL+ + +M     KPD      LL AC++
Sbjct: 487 AERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACAN 546

Query: 551 AGLAENARWYFESMDKVYGI-------------------------------KPGPDHYAC 579
               E  +     + K YG                                + G   ++ 
Sbjct: 547 LSAFEQGKQLHVHILK-YGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSA 605

Query: 580 MIDLLGRSGKLIEAKALLDQMVGE---PDATVWKALLSACRVHG---DLELGERAANNLF 633
           MI  L + G   +A  L +QM+ E   P+     ++L AC   G   + +L   +   LF
Sbjct: 606 MIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELF 665

Query: 634 ELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
             +PM    Y  + ++   AGK  +A  +   M
Sbjct: 666 GFKPMQEH-YACMIDLLGRAGKINEAVELVNKM 697



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 166/612 (27%), Positives = 280/612 (45%), Gaps = 65/612 (10%)

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE 153
           PFK       LI     +  D +   +   +    + P+  +   +L  C     L+ G 
Sbjct: 20  PFK---PAPKLIQTVPQFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGL 76

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQN 213
           Q H +  K+    +  +   L+++Y+KC+    A  L     +  + V+W+ +I+GY+QN
Sbjct: 77  QIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSE-PDLVSWSALISGYAQN 135

Query: 214 GYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
           G G  A+  F +M + GV+ N+FTF S+L AC+ V     G QVHG ++ SGFE +V+V 
Sbjct: 136 GLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVA 195

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
           + L+ MYAKC +   ++RL +     N VSWN++   + +  F  EA+ LF +M    IK
Sbjct: 196 NTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIK 255

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
            ++F+  S++N      D +  K +H  ++K G++   F  NAL+DMYAK G+L  A  V
Sbjct: 256 PNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISV 315

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           F  ++  D++SW ++I GC  H  +E+AL+    M+                        
Sbjct: 316 FEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMK------------------------ 351

Query: 454 EFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC 513
              +Q+H+  +K    S L V   LV +Y+KC  + DA   F+ +  +D+I W A+I G 
Sbjct: 352 ---RQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGY 408

Query: 514 AQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW-------------- 559
           +Q  +  EAL  + +M   G   +  T   +L + +   +    R               
Sbjct: 409 SQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDI 468

Query: 560 --------------YFESMDKVYGIKPGPD--HYACMIDLLGRSGKLIEAKAL---LDQM 600
                         + E  ++++      D   +  MI    + G+  EA  L   +  M
Sbjct: 469 YVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDM 528

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELE-PMNAMPYVQLSNMYSTAGKWEDA 659
             +PD  V  +LL+AC      E G++   ++ +    ++      L NMY+  G  +DA
Sbjct: 529 ELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDA 588

Query: 660 ARVRKLMKSRGI 671
            R    +  RGI
Sbjct: 589 GRAFSELTERGI 600



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/392 (32%), Positives = 206/392 (52%), Gaps = 28/392 (7%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G L +   D D F+ N ++  YA  G L +A  +F +    +  +W+++I G   +    
Sbjct: 282 GYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHE 341

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           +A EL  QM+                            Q H   +K   + + FV  GLV
Sbjct: 342 QALELLGQMK---------------------------RQLHSSLMKMDMESDLFVSVGLV 374

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMY+KC  + +A   F + P+ K+ +AW  +I+GYSQ     +A+  F +M  EG+  NQ
Sbjct: 375 DMYSKCDLLEDARMAFNLLPE-KDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQ 433

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            T  +IL + A +       QVHG  + SGF +++YV ++LID Y KC  ++ A R+ E 
Sbjct: 434 TTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEE 493

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
             I + VS+ SMI  +A+ G  +EAL LF +M   ++K D F   S+LN  A+       
Sbjct: 494 CTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQG 553

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           K +H  I+K GF    F  N+L++MYAK G++D A   F+ + ++ ++SW+++I G A H
Sbjct: 554 KQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQH 613

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSAC 447
           G   +AL+ F+ M   G+ P+H+ + S+L AC
Sbjct: 614 GHGRQALQLFNQMLKEGVSPNHITLVSVLGAC 645



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 125/426 (29%), Positives = 210/426 (49%), Gaps = 51/426 (11%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAA------------------------ 76
           ALVD ++  G++ +A  +FEK+   D  +WN +IA                         
Sbjct: 298 ALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSS 357

Query: 77  -------------------YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEA 117
                              Y+    L +A+  FN  P K+   W+++I GYS Y  D+EA
Sbjct: 358 LMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEA 417

Query: 118 FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
             LF +M  EG   +Q TL  +L+  +   ++    Q HG ++K+ F  + +VV  L+D 
Sbjct: 418 LSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDS 477

Query: 178 YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
           Y KC  + +AE +F+    G + V++T+MIT Y+Q G G +A++ F +M+   ++ ++F 
Sbjct: 478 YGKCSHVEDAERIFEECTIG-DLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFV 536

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
             S+L ACA +SA + G Q+H  IL  GF  +++  ++L++MYAKCG +D A R   +SE
Sbjct: 537 CSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGR--AFSE 594

Query: 298 IDNE--VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNN 354
           +     VSW++MI G A+ G  ++AL LF +M    +  +  T  SVL  C  + +    
Sbjct: 595 LTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEA 654

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCA 413
                S+    GF+  +     +ID+  + G ++ A  + N M  + +   W +L+    
Sbjct: 655 KLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAAR 714

Query: 414 YHGSYE 419
            H   E
Sbjct: 715 IHKDVE 720


>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 833

 Score =  604 bits (1557), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 307/745 (41%), Positives = 456/745 (61%), Gaps = 7/745 (0%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           +  NT+I  Y+  G + EA+++F+    K   TW++LI GY+  G   EAF LF QM  E
Sbjct: 93  YELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDE 152

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G  PS  T  +VL  CS    L  G++ H   +   F  +  + T LV MY K   + +A
Sbjct: 153 GLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDA 212

Query: 188 EYLFKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
             +F    DG   ++   +  M+ GY+++G   KA E F  M+  G++ N+ +F SIL  
Sbjct: 213 RQVF----DGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDG 268

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C    A  +G  VH   +++G   ++ V ++LI MY  CG ++ ARR+ +  ++ + VSW
Sbjct: 269 CWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSW 328

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
             MI G+A  G  ++A  LF  M    I+ D  TY  ++N  A + +LN+A+ +HS +  
Sbjct: 329 TVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDI 388

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            GF     V+ AL+ MYAK G +  A  VF+ M  +DV+SW+++I     +G   EA + 
Sbjct: 389 AGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFET 448

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           F  M+ S I PD V   ++L+AC  L  L+ G +++   +K+   S + + N+L+++ AK
Sbjct: 449 FHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAK 508

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
            G +  A  +FD+M  RDVITW A+I G + +G  +EAL  +D+ML    +P+ +TFVG+
Sbjct: 509 HGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGV 568

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L ACS AG  +  R +F  + +  GI P    Y CM+DLLGR+G+L EA+ L+  M  +P
Sbjct: 569 LSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKP 628

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
            +++W +LL ACR+HG+L++ ERAA     ++P +   YVQLS+MY+ AG WE+ A+VRK
Sbjct: 629 TSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRK 688

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
           +M+SRGIRKE GC+W+E   +VH F+ EDR HPL  +IY+++  +M  IK  GY+P    
Sbjct: 689 VMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIKREGYIPITQN 748

Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
            LH+V E+ KE  ++YHSEKLA+A+G+L+LP G PIRI+KNLRVC DCH+A K+IS V  
Sbjct: 749 VLHDVGEQQKEEAISYHSEKLAIAYGVLSLPSGTPIRIYKNLRVCSDCHSASKFISKVTG 808

Query: 785 RHIILRDSNRFHHFKAGNCSCGDYW 809
           R II RD++RFHHFK G CSCGDYW
Sbjct: 809 REIIARDASRFHHFKDGVCSCGDYW 833



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 118/379 (31%), Positives = 200/379 (52%), Gaps = 2/379 (0%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           T+  +   C  +     G QV   I+  G + N+Y  + LI +Y+ CG++  AR++ +  
Sbjct: 59  TYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSV 118

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
           E    V+WN++I G+A+ G  KEA +LF++M    ++    T+ SVL+  +S   LN  K
Sbjct: 119 ENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGK 178

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            VH+ +V  GF     +  AL+ MY K G++D A  VF+ +  +DV ++  ++ G A  G
Sbjct: 179 EVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSG 238

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
            +E+A + F  M+  G+ P+ +   SIL  C     L +G+ VHA  + +G    + V  
Sbjct: 239 DWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVAT 298

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           SL+ +Y  CG I  A RVFD+M  RDV++WT +I G A+NG  ++A   +  M   G +P
Sbjct: 299 SLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQP 358

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           D IT++ ++ AC+ +    +AR     +D + G          ++ +  + G + +A+ +
Sbjct: 359 DRITYMHIMNACAISANLNHAREIHSQVD-IAGFGTDLLVSTALVHMYAKCGAIKDARQV 417

Query: 597 LDQMVGEPDATVWKALLSA 615
            D M    D   W A++ A
Sbjct: 418 FDAM-PRRDVVSWSAMIGA 435



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 173/378 (45%), Gaps = 46/378 (12%)

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
           ID  TY  +        D    K V   I++ G +   +  N LI +Y+  GN+  A  +
Sbjct: 55  IDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQI 114

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           F+ +++K V++W +LI G A  G  +EA   F  M   G+ P  +   S+L AC+    L
Sbjct: 115 FDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGL 174

Query: 454 EFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC 513
            +G++VHA  + +G  S   +  +LV +Y K G ++DA +VFD +H RDV T+  ++ G 
Sbjct: 175 NWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGY 234

Query: 514 AQNGKGKEALQFYDQMLARGTKPDYITFVGLL----------------FACSHAGLA--- 554
           A++G  ++A + + +M   G KP+ I+F+ +L                  C +AGL    
Sbjct: 235 AKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDI 294

Query: 555 ----------------ENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLD 598
                           E AR  F++M KV  +      +  MI+    +G + +A  L  
Sbjct: 295 RVATSLIRMYTTCGSIEGARRVFDNM-KVRDVVS----WTVMIEGYAENGNIEDAFGLFA 349

Query: 599 QMVGE---PDATVWKALLSACRVHGDLELGERAANNLFELEPMNA--MPYVQLSNMYSTA 653
            M  E   PD   +  +++AC +  +L    R  ++  ++       +    L +MY+  
Sbjct: 350 TMQEEGIQPDRITYMHIMNACAISANLNHA-REIHSQVDIAGFGTDLLVSTALVHMYAKC 408

Query: 654 GKWEDAARVRKLMKSRGI 671
           G  +DA +V   M  R +
Sbjct: 409 GAIKDARQVFDAMPRRDV 426



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 127/294 (43%), Gaps = 41/294 (13%)

Query: 23  ARYTHNVGNSVKPASDL--NRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           AR  H+  +     +DL  + ALV  ++  G I +A Q+F+ M  RD  +W+ MI AY  
Sbjct: 379 AREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVE 438

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
           +G                        YG        EAFE F  M+     P   T  N+
Sbjct: 439 NG------------------------YG-------TEAFETFHLMKRSNIEPDGVTYINL 467

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG--LVDMYAKCKCIFEAEYLFKMFPDG 197
           L  C   G L  G + +  AIK   DL + V  G  L+ M AK   +  A Y+F      
Sbjct: 468 LNACGHLGALDVGMEIYTQAIKA--DLVSHVPLGNALIIMNAKHGSVERARYIFDTMVR- 524

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           ++ + W  MI GYS +G   +A+  F  M  E    N  TF  +L+AC+     D G + 
Sbjct: 525 RDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRF 584

Query: 258 HGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIV 309
              +L   G    V +   ++D+  + G+LD A  L++   +    S W+S++V
Sbjct: 585 FTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLV 638



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 77/197 (39%), Gaps = 33/197 (16%)

Query: 20  IGPARYTHNVGNSVKPASDLNRALVDF-SNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYA 78
           +G   YT  +   +     L  AL+   +  G ++ A  +F+ M  RD  TWN MI  Y+
Sbjct: 479 VGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYS 538

Query: 79  NSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDN 138
             G  REA  LF+                               +M  E +RP+  T   
Sbjct: 539 LHGNAREALYLFD-------------------------------RMLKERFRPNSVTFVG 567

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG-LVDMYAKCKCIFEAEYLFKMFPDG 197
           VL  CS  G +  G +F  Y ++    +    + G +VD+  +   + EAE L K  P  
Sbjct: 568 VLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVK 627

Query: 198 KNHVAWTTMITGYSQNG 214
                W++++     +G
Sbjct: 628 PTSSIWSSLLVACRIHG 644


>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 307/748 (41%), Positives = 459/748 (61%), Gaps = 5/748 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           + DGF  NT++  YA  G L ++++LF     +N  +W++L   Y    L  EA  LF +
Sbjct: 114 ESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKE 173

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M   G  P+++++  +L  C+       G + HG  +K   DL+ F    LVDMY+K   
Sbjct: 174 MVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGE 233

Query: 184 IFEAEYLFK--MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
           I  A  +F+    PD    V+W  +I G   +     A+    +M+  G   N FT  S 
Sbjct: 234 IEGAVAVFQDIAHPDV---VSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSA 290

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           L ACAA+  ++ G Q+H  ++     ++++    L+DMY+KC  +D ARR  +     + 
Sbjct: 291 LKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDI 350

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           ++WN++I G+++ G H +A+SLF KM + DI  +  T  +VL   AS   +   K +H++
Sbjct: 351 IAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTI 410

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
            +K+G     +V N+L+D Y K  ++D A  +F     +D++++TS+IT  + +G  EEA
Sbjct: 411 SIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEA 470

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           LK +  M+ + I PD  + SS+L+ACA L+  E G+Q+H   +K G    +   NSLV +
Sbjct: 471 LKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNM 530

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           YAKCG I DA+R F  +  R +++W+A+I G AQ+G GKEAL+ ++QML  G  P++IT 
Sbjct: 531 YAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITL 590

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
           V +L AC+HAGL    + YFE M+ ++GIKP  +HYACMIDLLGRSGKL EA  L++ + 
Sbjct: 591 VSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIP 650

Query: 602 GEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
            E D  VW ALL A R+H ++ELG++AA  LF+LEP  +  +V L+N+Y++AG WE+ A+
Sbjct: 651 FEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAK 710

Query: 662 VRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPD 721
           VRK MK   ++KEPG SW+E   +V+ FI  DR H    +IY+K+D++  L+ +AGY   
Sbjct: 711 VRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQLGDLLSKAGYSSI 770

Query: 722 MNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISA 781
           +   +HNV++  KE  L +HSEKLAVAFGL+  P G PIR+ KNLR+C DCHT  K++  
Sbjct: 771 VEIDIHNVDKSEKEKLLYHHSEKLAVAFGLIATPPGGPIRVKKNLRICVDCHTFFKFVCK 830

Query: 782 VYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +  R II+RD NRFHHFK G+CSCGDYW
Sbjct: 831 IVSREIIVRDINRFHHFKDGSCSCGDYW 858



 Score =  268 bits (686), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 171/575 (29%), Positives = 295/575 (51%), Gaps = 15/575 (2%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           RD    N ++  Y+   R   A+KL +E+   +  +WSSL+ GY   G   EA  +F +M
Sbjct: 14  RDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEM 73

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
            L G + +++T  +VL+ CS+K  L  G + HG A+ T F+ + FV   LV MYAKC  +
Sbjct: 74  CLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLL 133

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            ++  LF    + +N V+W  + + Y Q+    +A+  F++M   G+  N+F+   IL A
Sbjct: 134 DDSRRLFGGIVE-RNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNA 192

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           CA +   D G ++HG +L  G + + +  +AL+DMY+K G+++ A  + +     + VSW
Sbjct: 193 CAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSW 252

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N++I G      +  AL L  +M     + + FT  S L   A+       + +HS ++K
Sbjct: 253 NAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIK 312

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
                  F    L+DMY+K   +D A   ++ M  KD+I+W +LI+G +  G + +A+  
Sbjct: 313 MDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSL 372

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           FS M    I  +   +S++L + A L  ++  +Q+H + +KSG  S   V NSL+  Y K
Sbjct: 373 FSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGK 432

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           C  I++A+++F+     D++ +T++I   +Q G G+EAL+ Y QM     KPD      L
Sbjct: 433 CNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSL 492

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPG--PDHYA--CMIDLLGRSGKLIEAKALLDQM 600
           L AC++    E  +        V+ IK G   D +A   ++++  + G + +A     ++
Sbjct: 493 LNACANLSAYEQGKQL-----HVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEI 547

Query: 601 VGEPDATV--WKALLSACRVHGDLELGERAANNLF 633
              P+  +  W A++     HG  +   R  N + 
Sbjct: 548 ---PNRGIVSWSAMIGGYAQHGHGKEALRLFNQML 579



 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 169/552 (30%), Positives = 273/552 (49%), Gaps = 35/552 (6%)

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQN 213
           + H + IK  F  +  +   LV +Y+KC+    A  L     +  + V+W+++++GY QN
Sbjct: 2   ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSE-LDVVSWSSLLSGYVQN 60

Query: 214 GYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
           G+  +A+  F +M + GV+ N+FTFPS+L AC+     + G +VHG  + +GFE++ +V 
Sbjct: 61  GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
           + L+ MYAKCG LD +RRL       N VSWN++   + +     EA+ LFK+M    I 
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIM 180

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
            ++F+   +LN  A   + +  + +H L++K G +  +F  NAL+DMY+K G ++ A  V
Sbjct: 181 PNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAV 240

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           F  +   DV+SW ++I GC  H   + AL    +M+ SG  P+   +SS L ACA +   
Sbjct: 241 FQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFK 300

Query: 454 EFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC 513
           E G+Q+H+  +K    S L     LV +Y+KC  ++DA R +DSM  +D+I W ALI G 
Sbjct: 301 ELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGY 360

Query: 514 AQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENAR--------------- 558
           +Q G   +A+  + +M +     +  T   +L + +     +  +               
Sbjct: 361 SQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDF 420

Query: 559 WYFESMDKVYGIKPGPDH---------------YACMIDLLGRSGKLIEAKALLDQMVG- 602
           +   S+   YG     D                Y  MI    + G   EA  L  QM   
Sbjct: 421 YVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDA 480

Query: 603 --EPDATVWKALLSACRVHGDLELGERAANNLFELEPM-NAMPYVQLSNMYSTAGKWEDA 659
             +PD  +  +LL+AC      E G++   +  +   M +      L NMY+  G  EDA
Sbjct: 481 DIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDA 540

Query: 660 ARVRKLMKSRGI 671
            R    + +RGI
Sbjct: 541 DRAFSEIPNRGI 552



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 150/503 (29%), Positives = 259/503 (51%), Gaps = 4/503 (0%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G + +   D D F+ N ++  Y+ +G +  A  +F +    +  +W+++I G   +  + 
Sbjct: 207 GLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCND 266

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
            A  L  +M+  G RP+ +TL + L+ C+  G  + G Q H   IK     + F   GLV
Sbjct: 267 LALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLV 326

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMY+KC+ + +A   +   P  K+ +AW  +I+GYSQ G    A+  F  M  E ++ NQ
Sbjct: 327 DMYSKCEMMDDARRAYDSMPK-KDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQ 385

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            T  ++L + A++ A     Q+H   + SG  ++ YV ++L+D Y KC  +D A ++ E 
Sbjct: 386 TTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEE 445

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
              ++ V++ SMI  +++ G  +EAL L+ +M   DIK D F   S+LN  A+       
Sbjct: 446 RTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQG 505

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           K +H   +K GF    F +N+L++MYAK G+++ A   F+ + ++ ++SW+++I G A H
Sbjct: 506 KQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQH 565

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G  +EAL+ F+ M   G+ P+H+ + S+L AC    ++  G+Q         G       
Sbjct: 566 GHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEH 625

Query: 476 NS-LVLVYAKCGCINDANRVFDSM-HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
            + ++ +  + G +N+A  + +S+    D   W AL +G A+  K  E  Q   +ML   
Sbjct: 626 YACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGAL-LGAARIHKNIELGQKAAKMLFDL 684

Query: 534 TKPDYITFVGLLFACSHAGLAEN 556
                 T V L    + AG+ EN
Sbjct: 685 EPEKSGTHVLLANIYASAGMWEN 707



 Score = 47.4 bits (111), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 31/110 (28%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++  G I++A + F ++ +R   +W+ MI  YA  G  +EA +LFN              
Sbjct: 531 YAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFN-------------- 576

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
                            QM  +G  P+  TL +VL  C+  GL+  G+Q+
Sbjct: 577 -----------------QMLRDGVPPNHITLVSVLCACNHAGLVNEGKQY 609


>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  600 bits (1547), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 299/766 (39%), Positives = 461/766 (60%), Gaps = 2/766 (0%)

Query: 45  DFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSL 104
           +F  +GE+ +A QLFEKM  ++  + N MI+ Y  SG L EA+KLF+    +   TW+ L
Sbjct: 61  NFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTIL 120

Query: 105 IYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCF 164
           I GYS      EAFELF QMQ  G  P   T   +L  C+   +  +  Q     IK  +
Sbjct: 121 IGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGY 180

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
           D    V   LVD Y K   +  A  LFK  P+  + V++  MITGYS++G   KA+  F 
Sbjct: 181 DSRLIVGNTLVDSYCKSNRLDLACQLFKEMPE-IDSVSYNAMITGYSKDGLDEKAVNLFV 239

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
           +M+  G++  +FTF ++L A   +     G Q+H  ++ + F  NV+V +AL+D Y+K  
Sbjct: 240 EMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHD 299

Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
            +  AR+L +     + VS+N +I G+A  G HK A  LF+++         F + ++L+
Sbjct: 300 SVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLS 359

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
             ++ +D    + +H+  + T  +    V N+L+DMYAK G  + A M+F  +  +  + 
Sbjct: 360 IASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVP 419

Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
           WT++I+     G YEE L+ F+ MR + +  D    +S+L A A +  L  G+Q+H+  +
Sbjct: 420 WTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFII 479

Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ 524
           KSG  S++   ++L+ VYAKCG I DA + F  M  R++++W A+I   AQNG+ +  L+
Sbjct: 480 KSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLK 539

Query: 525 FYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLL 584
            + +M+  G +PD ++F+G+L ACSH+GL E   W+F SM ++Y + P  +HYA ++D+L
Sbjct: 540 SFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDML 599

Query: 585 GRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM-NAMPY 643
            RSG+  EA+ L+ +M  +PD  +W ++L+ACR+H + EL  RAA+ LF +E + +A PY
Sbjct: 600 CRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPY 659

Query: 644 VQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIY 703
           V +SN+Y+ AG+WE+ ++V K M+ RG++K P  SWVE   + H+F + DR HP   +I 
Sbjct: 660 VNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIR 719

Query: 704 SKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIF 763
            KID +   ++E GY PD + ALHN +E+ K   L YHSE+LA+AF L++ P+G+PI + 
Sbjct: 720 KKIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVM 779

Query: 764 KNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           KNLR C DCH A+K IS +  R I +RDS RFHHF+ G CSCGD+W
Sbjct: 780 KNLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 825



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 189/388 (48%), Gaps = 35/388 (9%)

Query: 39  LNRALVDF-SNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           ++ AL+DF S    + +A +LF++M ++DG ++N +I+ YA  G+               
Sbjct: 287 VSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGK--------------- 331

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                   + Y        AF+LF ++Q   +   Q+    +L + S     + G Q H 
Sbjct: 332 --------HKY--------AFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHA 375

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
             I T  D    V   LVDMYAKC    EAE +F      ++ V WT MI+ Y Q G+  
Sbjct: 376 QTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTH-RSAVPWTAMISAYVQKGFYE 434

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           + ++ F  MR   V ++Q TF S+L A A++++   G Q+H  I+ SGF +NV+  SAL+
Sbjct: 435 EGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALL 494

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
           D+YAKCG +  A +  +     N VSWN+MI  +A+ G  +  L  FK+M    ++ D  
Sbjct: 495 DVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSV 554

Query: 338 TYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
           ++  VL+ C  S +        +S+      +  +    +++DM  + G  + A  +   
Sbjct: 555 SFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAE 614

Query: 397 MQ-DKDVISWTSLITGCAYHGSYEEALK 423
           M  D D I W+S++  C  H + E A +
Sbjct: 615 MPIDPDEIMWSSVLNACRIHKNQELARR 642



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 123/511 (24%), Positives = 209/511 (40%), Gaps = 74/511 (14%)

Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG----- 315
           I+ +GF+ +    +  +  + K G+L  AR+L E     N VS N MI G+ + G     
Sbjct: 43  IVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEA 102

Query: 316 --------------------------FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
                                       KEA  LF +M     + D  T+ ++L+    +
Sbjct: 103 RKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGH 162

Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
              N    V + I+K G++    V N L+D Y K   LD A  +F  M + D +S+ ++I
Sbjct: 163 EMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMI 222

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
           TG +  G  E+A+  F +M+ SG+ P     +++L A   L  +  GQQ+H+  +K+   
Sbjct: 223 TGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFV 282

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
            ++ V N+L+  Y+K   + DA ++FD M  +D +++  +I G A +GK K A   + ++
Sbjct: 283 WNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFREL 342

Query: 530 LARGTKPDYITFVGLLFACSHA-----GLAENARWYFESMDKVYGIKPGPDHYACMIDLL 584
                      F  +L   S+      G   +A+    + D    +         ++D+ 
Sbjct: 343 QFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNS------LVDMY 396

Query: 585 GRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYV 644
            + GK  EA+ +   +     A  W A++SA    G  E G                  +
Sbjct: 397 AKCGKFEEAEMIFTNLTHR-SAVPWTAMISAYVQKGFYEEG------------------L 437

Query: 645 QLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISED-------RGHP 697
           QL N    A    D A    L+     R     + +    Q+H FI +         G  
Sbjct: 438 QLFNKMRQASVIADQATFASLL-----RASASIASLSLGKQLHSFIIKSGFMSNVFSGSA 492

Query: 698 LRTDIYSKIDEIMLLIKEAGYVPDMNFALHN 728
           L  D+Y+K   I   ++    +PD N    N
Sbjct: 493 L-LDVYAKCGSIKDAVQTFQEMPDRNIVSWN 522



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 136/304 (44%), Gaps = 43/304 (14%)

Query: 347 ASNIDLNNAKSVHSLIVKTGFE------GYKFVN-------------------------N 375
           +  + LN   ++ + IVKTGF+       ++  N                         N
Sbjct: 28  SPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTN 87

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
            +I  Y K GNL  A  +F+ M ++  ++WT LI G +    ++EA + F  M+  G  P
Sbjct: 88  MMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEP 147

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           D+V   ++LS C    +     QV    +K G  S L V N+LV  Y K   ++ A ++F
Sbjct: 148 DYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLF 207

Query: 496 DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG--- 552
             M   D +++ A+I G +++G  ++A+  + +M   G KP   TF  +L  C++ G   
Sbjct: 208 KEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIGLDD 265

Query: 553 --LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
             L +    +    + V+ +         ++D   +   +I+A+ L D+M  E D   + 
Sbjct: 266 IVLGQQIHSFVIKTNFVWNVFVS----NALLDFYSKHDSVIDARKLFDEM-PEQDGVSYN 320

Query: 611 ALLS 614
            ++S
Sbjct: 321 VIIS 324


>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
 gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
          Length = 920

 Score =  600 bits (1546), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 306/754 (40%), Positives = 445/754 (59%), Gaps = 1/754 (0%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            Q++++    + F  N +IA Y   G  + A+++F +  F +  T+++LI G++  G   
Sbjct: 168 AQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGE 227

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
            A ++F +MQL G RP   T+ ++L  C+  G LQ+G+Q H Y +K     +      L+
Sbjct: 228 CALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLL 287

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           D+Y KC  I  A  +F +  D  N V W  M+  Y Q     K+ E F  M+  G+  NQ
Sbjct: 288 DLYVKCGDIETAHDIFNL-GDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQ 346

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
           FT+P IL  C      + G Q+H   + +GFE+++YV   LIDMY+K G LD AR++LE 
Sbjct: 347 FTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEM 406

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
            E  + VSW SMI G+ +  F +EAL+ FK+M    +  D+    S  +  A    +   
Sbjct: 407 LEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQG 466

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
             +H+ +  +G+     + N L+++YA+ G  + AF +F  ++ KD I+W  LI+G    
Sbjct: 467 LQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQS 526

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
             Y++AL  F  M  +G   +     S +SA A L  ++ G+QVH   +K+G  S   V 
Sbjct: 527 RLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVA 586

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           N+L+ +Y KCG I DA  +F  M  R+ ++W  +I  C+Q+G+G EAL  +DQM   G K
Sbjct: 587 NALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLK 646

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           P+ +TF+G+L ACSH GL E    YF+SM  VYG+ P PDHYAC++D+LGR+G+L  A+ 
Sbjct: 647 PNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARR 706

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
            +D+M    +A +W+ LLSAC+VH ++E+GE AA +L ELEP ++  YV LSN Y+  GK
Sbjct: 707 FVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGK 766

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
           W +  +VRK+MK RGIRKEPG SW+E  + VH F   DR HPL   IY  + E+   + +
Sbjct: 767 WANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSK 826

Query: 716 AGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
            GY  +     H  E+E K+     HSEKLAVAFGL+TLP   P+R+ KNLRVC DCH+ 
Sbjct: 827 IGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSW 886

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           MK  S V  R I+LRD  RFHHF +G+CSCGDYW
Sbjct: 887 MKCTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920



 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 177/563 (31%), Positives = 295/563 (52%), Gaps = 19/563 (3%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D    N +I  YA +G + +A+++F E   ++  +W +++ GY+  GL  EAF L+ QM 
Sbjct: 77  DRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMH 136

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
                P+ Y L +VL  C+   L  +G   H    K  F    FV   L+ +Y       
Sbjct: 137 WTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFK 196

Query: 186 EAEYLF--KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
            AE +F   +F D    V + T+I+G++Q G+G  A++ F +M++ G+  +  T  S+L 
Sbjct: 197 LAERVFCDMLFCD---RVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLA 253

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           ACA+V     G Q+H  +L +G   +   + +L+D+Y KCGD+++A  +    +  N V 
Sbjct: 254 ACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVL 313

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN M+V + +     ++  +F +M A  I  + FTYP +L        +   + +HSL +
Sbjct: 314 WNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSI 373

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K GFE   +V+  LIDMY+K G LD A  +  +++ +DV+SWTS+I G   H   EEAL 
Sbjct: 374 KNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALA 433

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            F +M+  G+ PD++ ++S  SACA +  +  G Q+HA    SG  + +S+ N+LV +YA
Sbjct: 434 TFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYA 493

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           +CG   +A  +F  +  +D ITW  LI G  Q+   K+AL  + +M   G K +  TF+ 
Sbjct: 494 RCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFIS 553

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA------CMIDLLGRSGKLIEAKALL 597
            + A   A LA+      +   +V+G      H +       +I L G+ G + +AK + 
Sbjct: 554 AISAL--ANLAD-----IKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIF 606

Query: 598 DQMVGEPDATVWKALLSACRVHG 620
            +M    + + W  ++++C  HG
Sbjct: 607 SEMSLRNEVS-WNTIITSCSQHG 628



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 232/484 (47%), Gaps = 19/484 (3%)

Query: 143 CSLKGLLQRGEQF------HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD 196
           C+L+    RG ++      H  ++      +  +   L+D+YAK   +++A  +FK    
Sbjct: 47  CALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKEL-S 105

Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
            ++HV+W  M++GY+Q+G G +A   +  M    V    +   S+L+AC        G  
Sbjct: 106 SRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRM 165

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           +H  +    F +  +V +ALI +Y   G    A R+       + V++N++I G A+ G 
Sbjct: 166 IHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGH 225

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
            + AL +F +M    ++ D  T  S+L   AS  DL   K +HS ++K G         +
Sbjct: 226 GECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGS 285

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           L+D+Y K G+++ A  +FNL    +V+ W  ++          ++ + F  M+ +GI P+
Sbjct: 286 LLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPN 345

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFD 496
                 IL  C     +E G+Q+H++ +K+G  S + V   L+ +Y+K GC++ A ++ +
Sbjct: 346 QFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILE 405

Query: 497 SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS-----HA 551
            +  RDV++WT++I G  Q+   +EAL  + +M   G  PD I       AC+       
Sbjct: 406 MLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQ 465

Query: 552 GLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKA 611
           GL  +AR Y      V G       +  +++L  R G+  EA +L  + +   D   W  
Sbjct: 466 GLQIHARVY------VSGYAADISIWNTLVNLYARCGRSEEAFSLFRE-IEHKDEITWNG 518

Query: 612 LLSA 615
           L+S 
Sbjct: 519 LISG 522



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 78/187 (41%), Gaps = 39/187 (20%)

Query: 30  GNSVKPA----SDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLR 84
           G +VK      +++  AL+  +   G I++A  +F +MS R+  +WNT+I + +  GR  
Sbjct: 572 GRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGR-- 629

Query: 85  EAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCS 144
                                         +EA +LF QM+ EG +P+  T   VL  CS
Sbjct: 630 -----------------------------GLEALDLFDQMKQEGLKPNDVTFIGVLAACS 660

Query: 145 LKGLLQRGEQFHGYAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVA 202
             GL++ G  +   ++   + LN        +VD+  +   +  A       P   N + 
Sbjct: 661 HVGLVEEGLSYFK-SMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMI 719

Query: 203 WTTMITG 209
           W T+++ 
Sbjct: 720 WRTLLSA 726


>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  600 bits (1546), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 300/756 (39%), Positives = 461/756 (60%), Gaps = 13/756 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY-----SNYGLDIEAFEL 120
           D F  N ++  Y+  G L  A+++F+ TP ++  TW++++  Y     SN G   E   L
Sbjct: 111 DHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHL 170

Query: 121 FWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK 180
           F  ++      ++ TL  VL+LC   G L   E  HGYAIK   + + FV   LV++Y+K
Sbjct: 171 FRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSK 230

Query: 181 CKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
           C  + +A  LF    + ++ V W  M+ GY Q G   +A + F +    G+  ++F+   
Sbjct: 231 CGRMRDARLLFDWMRE-RDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQL 289

Query: 241 ILTAC--AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI 298
           IL  C  A     + G QVHG  + SG +++V V ++L++MY+K G    AR +    + 
Sbjct: 290 ILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKH 349

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN-----IDLN 353
            + +SWNSMI   A+    +E+++LF  +    +K D FT  S+    A+      + L+
Sbjct: 350 LDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLD 409

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
             K +H+  +K GF+    VN+ ++DMY K G++  A +VFN +   D ++WTS+I+GC 
Sbjct: 410 QGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCV 469

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
            +G+ ++AL+ +  MR S + PD    ++++ A + +T LE G+Q+HA  +K    S   
Sbjct: 470 DNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPF 529

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
           V  SLV +YAKCG I DA R+F  M+ R++  W A+++G AQ+G  +EA+  +  M + G
Sbjct: 530 VGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHG 589

Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
            +PD ++F+G+L ACSHAGL   A  Y  SM   YGI+P  +HY+C++D LGR+G + EA
Sbjct: 590 IEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEA 649

Query: 594 KALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTA 653
             +++ M  +  A++ +ALL ACR+ GD+E G+R A  LF LEP ++  YV LSN+Y+ A
Sbjct: 650 DKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAA 709

Query: 654 GKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLI 713
            +W+D    RK+MK + ++K+PG SW++  + +H+F+ +DR HP    IY K++E+M  I
Sbjct: 710 NRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTI 769

Query: 714 KEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCH 773
           +E GYVPD  F L +VE+E KE  L YHSEKLA+A+GL++ P    IR+ KNLRVCGDCH
Sbjct: 770 REDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCH 829

Query: 774 TAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            A+KYIS V+ R I+LRD+NRFHHF+ G CSCGDYW
Sbjct: 830 NAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 865



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/467 (28%), Positives = 224/467 (47%), Gaps = 50/467 (10%)

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G   H  I+ SG   + ++ + L+ MY+KCG L SAR++ + +   + V+WN+++  +A
Sbjct: 95  LGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYA 154

Query: 313 -----RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
                  G  +E L LF+ + A        T   VL    ++  L  A+ VH   +K G 
Sbjct: 155 ASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGL 214

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
           E   FV+ AL+++Y+K G +  A ++F+ M+++DV+ W  ++ G    G  +EA + FS+
Sbjct: 215 EWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSE 274

Query: 428 MRISGICPDHVVVSSILSAC--AELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
              SG+ PD   V  IL+ C  A    LE G+QVH + +KSG  S +SV NSLV +Y+K 
Sbjct: 275 FHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKM 334

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           GC   A  VF+ M   D+I+W ++I  CAQ+   +E++  +  +L  G KPD+ T   + 
Sbjct: 335 GCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASIT 394

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDH----YACMIDLLGRSGKLIEAKALLDQMV 601
            A +                  + IK G D      + ++D+  + G ++ A  + +  +
Sbjct: 395 LATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFN-YI 453

Query: 602 GEPDATVWKALLSACRVHGD-----------------------------------LELGE 626
             PD   W +++S C  +G+                                   LE G 
Sbjct: 454 SAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGR 513

Query: 627 RAANNLFELEPMNAMPYV--QLSNMYSTAGKWEDAARVRKLMKSRGI 671
           +   N+ +L+ ++  P+V   L +MY+  G  EDA R+ K M  R I
Sbjct: 514 QLHANVIKLDCVSD-PFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNI 559



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 190/363 (52%), Gaps = 8/363 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D    N+++  Y+  G    A+++FN+    +  +W+S+I   +   L+ E+  LF  
Sbjct: 318 DSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFID 377

Query: 124 MQLEGYRPSQYTLDNVL-----RLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMY 178
           +  EG +P  +TL ++      + C    LL +G+Q H +AIK  FD +  V +G++DMY
Sbjct: 378 LLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMY 437

Query: 179 AKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTF 238
            KC  +  A  +F  +    + VAWT+MI+G   NG   +A+  +  MR   V  +++TF
Sbjct: 438 IKCGDMVNAGIVFN-YISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTF 496

Query: 239 PSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI 298
            +++ A + V+A + G Q+H  ++     ++ +V ++L+DMYAKCG+++ A RL +   +
Sbjct: 497 ATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNV 556

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKS 357
            N   WN+M+VG A+ G  +EA++LFK M +  I+ D  ++  +L+ C  + +     + 
Sbjct: 557 RNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEY 616

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWT-SLITGCAYHG 416
           +HS+    G E      + L+D   + G +  A  V   M  K   S   +L+  C   G
Sbjct: 617 LHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQG 676

Query: 417 SYE 419
             E
Sbjct: 677 DVE 679



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 133/295 (45%), Gaps = 22/295 (7%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D    + ++  Y   G +  A  +FN     +   W+S+I G  + G + +A  ++ +
Sbjct: 424 DSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHR 483

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+     P +YT   +++  S    L++G Q H   IK     + FV T LVDMYAKC  
Sbjct: 484 MRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGN 543

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I +A  LFK   + +N   W  M+ G +Q+G   +A+  F+ M+  G+E ++ +F  IL+
Sbjct: 544 IEDAYRLFKKM-NVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILS 602

Query: 244 AC--AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           AC  A +++  +   +H      G E  +   S L+D   + G +  A +++E       
Sbjct: 603 ACSHAGLTSEAY-EYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKAS 661

Query: 302 VSWNSMIVG------------------FARQGFHKEALSLFKKMHARDIKIDDFT 338
            S N  ++G                  FA + F   A  L   ++A   + DD T
Sbjct: 662 ASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVT 716



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 21/191 (10%)

Query: 453 LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMG 512
           L  G+  HA  + SG      + N+L+ +Y+KCG ++ A +VFD+   RD++TW A++  
Sbjct: 93  LLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGA 152

Query: 513 CA-----QNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKV 567
            A      +G  +E L  +  + A       +T   +L  C ++G      W  E +   
Sbjct: 153 YAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSG----CLWAAEGVHG- 207

Query: 568 YGIKPGPDH----YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
           Y IK G +        ++++  + G++ +A+ L D M  E D  +W  +L      G ++
Sbjct: 208 YAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWM-RERDVVLWNMMLK-----GYVQ 261

Query: 624 LG-ERAANNLF 633
           LG E+ A  LF
Sbjct: 262 LGLEKEAFQLF 272



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 6/119 (5%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF-- 98
           +LVD ++  G I++A +LF+KM+ R+   WN M+   A  G   EA  LF          
Sbjct: 533 SLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEP 592

Query: 99  --FTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQ 154
              ++  ++   S+ GL  EA+E    M  + G  P       ++      GL+Q  ++
Sbjct: 593 DRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADK 651


>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 1047

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 316/784 (40%), Positives = 467/784 (59%), Gaps = 6/784 (0%)

Query: 31   NSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTW-----NTMIAAYANSGRLRE 85
            + V P   +  +++      E  + G+    +  + GF+      N ++  Y+  G    
Sbjct: 265  SGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIP 324

Query: 86   AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL 145
            A+++FN    ++  +++SLI G S  G   +A ELF +M L+  +P   T+ ++L  CS 
Sbjct: 325  AEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSS 384

Query: 146  KGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTT 205
             G L  G+QFH YAIK     +  +   L+D+Y KC  I  A   F +  + +N V W  
Sbjct: 385  VGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFF-LSTETENVVLWNV 443

Query: 206  MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
            M+  Y       ++ + F  M++EG+E NQFT+PSIL  C+++ A D G Q+H  +L +G
Sbjct: 444  MLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTG 503

Query: 266  FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
            F+ NVYV S LIDMYAK G LD A ++    +  + VSW +MI G+A+     EAL+LFK
Sbjct: 504  FQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFK 563

Query: 326  KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
            +M  + I  D+  + S ++  A    LN  + +H+    +G+     V NAL+ +YA+ G
Sbjct: 564  EMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCG 623

Query: 386  NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
             +  A+  F+ +  KD ISW SLI+G A  G  EEAL  FS M  +G   +       +S
Sbjct: 624  KVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVS 683

Query: 446  ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
            A A +  ++ G+Q+HA+ +K+G  S   V N L+ +YAKCG I+DA R F  M  ++ I+
Sbjct: 684  AAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEIS 743

Query: 506  WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMD 565
            W A++ G +Q+G G +AL  ++ M   G  P+++TFVG+L ACSH GL +    YF+SM 
Sbjct: 744  WNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMR 803

Query: 566  KVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELG 625
            +V+G+ P P+HYAC++DLLGRSG L  A+  +++M  +PDA V + LLSAC VH ++++G
Sbjct: 804  EVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIG 863

Query: 626  ERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQ 685
            E AA++L ELEP ++  YV LSNMY+  GKW    R R++MK RG++KEPG SW+E N+ 
Sbjct: 864  EFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNS 923

Query: 686  VHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKL 745
            VH F + D+ HP    IY  + ++  L  E GY+P  N  L++ E   K      HSEKL
Sbjct: 924  VHAFFAGDQKHPNVDKIYEYLRDLNELAAENGYIPQTNSLLNDAERRQKGPTQIIHSEKL 983

Query: 746  AVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSC 805
            A+AFGLL+L    PI +FKNLRVCGDCH  +KY+S +  R I++RDS RFHHFK G CSC
Sbjct: 984  AIAFGLLSLSSSTPIHVFKNLRVCGDCHNWIKYVSKISDRVIVVRDSYRFHHFKGGICSC 1043

Query: 806  GDYW 809
             DYW
Sbjct: 1044 KDYW 1047



 Score =  325 bits (833), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 189/579 (32%), Positives = 313/579 (54%), Gaps = 14/579 (2%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N +I  Y  +G L  AKK+F+    ++  +W +++ G S  G + EA  LF QM   
Sbjct: 206 FVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTS 265

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G  P+ Y   +VL  C+     + GEQ HG  +K  F L  +V   LV +Y++      A
Sbjct: 266 GVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPA 325

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
           E +F      ++ V++ ++I+G SQ GY  KA+E F+ M ++ ++ +  T  S+L+AC++
Sbjct: 326 EQVFNAMLQ-RDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSS 384

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           V A   G Q H   + +G  +++ ++ AL+D+Y KC D+ +A      +E +N V WN M
Sbjct: 385 VGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVM 444

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           +V +       E+  +F +M    I+ + FTYPS+L   +S   ++  + +H+ ++KTGF
Sbjct: 445 LVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGF 504

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
           +   +V++ LIDMYAK G LD A  +F  +++KDV+SWT++I G A H  + EAL  F +
Sbjct: 505 QFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKE 564

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           M+  GI  D++  +S +SACA +  L  GQQ+HA    SG    LSV N+LV +YA+CG 
Sbjct: 565 MQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGK 624

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           + DA   FD + ++D I+W +LI G AQ+G  +EAL  + QM   G + +  TF   + A
Sbjct: 625 VRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSA 684

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYA----CMIDLLGRSGKLIEAKALLDQMVGE 603
            ++    +  +     +     IK G D        +I L  + G + +A+    +M  E
Sbjct: 685 AANVANVKLGKQIHAMI-----IKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEM-PE 738

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
            +   W A+L+    HG    G +A +   +++ +  +P
Sbjct: 739 KNEISWNAMLTGYSQHGH---GFKALSLFEDMKQLGVLP 774



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 162/553 (29%), Positives = 272/553 (49%), Gaps = 6/553 (1%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           ++  Y   G L  A  +F+E P +    W+ +++ +    +      LF +M  E  +P 
Sbjct: 109 LMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPD 168

Query: 133 QYTLDNVLRLCSLKGL-LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
           + T   VLR C    +     E+ H   I   ++ + FV   L+D+Y K   +  A+ +F
Sbjct: 169 ERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVF 228

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
                 ++ V+W  M++G SQ+G   +A+  F  M   GV    + F S+L+AC  V   
Sbjct: 229 DGLQK-RDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFY 287

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
             G Q+HG +L  GF    YV +AL+ +Y++ G+   A ++       +EVS+NS+I G 
Sbjct: 288 KVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGL 347

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
           ++QG+  +AL LFKKM    +K D  T  S+L+  +S   L   K  HS  +K G     
Sbjct: 348 SQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDI 407

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
            +  AL+D+Y K  ++  A   F   + ++V+ W  ++       +  E+ K F+ M++ 
Sbjct: 408 ILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQME 467

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
           GI P+     SIL  C+ L  ++ G+Q+H   LK+G   ++ V + L+ +YAK G ++ A
Sbjct: 468 GIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHA 527

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
            ++F  +  +DV++WTA+I G AQ+ K  EAL  + +M  +G   D I F   + AC  A
Sbjct: 528 LKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISAC--A 585

Query: 552 GL-AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
           G+ A N      +   V G          ++ L  R GK+ +A    D++  + D   W 
Sbjct: 586 GIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSK-DNISWN 644

Query: 611 ALLSACRVHGDLE 623
           +L+S     G  E
Sbjct: 645 SLISGFAQSGHCE 657



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/519 (26%), Positives = 248/519 (47%), Gaps = 4/519 (0%)

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIK 161
           ++L Y YSN   +         M+  G R +  T   +L  C   G    G + HG  +K
Sbjct: 37  TALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILK 96

Query: 162 TCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIE 221
             F     +   L+D+Y     +  A  +F   P  +    W  ++  +       + + 
Sbjct: 97  MGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPV-RPLSCWNKVLHRFVAGKMAGRVLG 155

Query: 222 CFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ-VHGCILSSGFEANVYVQSALIDMY 280
            FR M  E V+ ++ T+  +L  C          + +H   ++ G+E +++V + LID+Y
Sbjct: 156 LFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLY 215

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
            K G L+SA+++ +  +  + VSW +M+ G ++ G  +EA+ LF +MH   +    + + 
Sbjct: 216 FKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFS 275

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
           SVL+           + +H L++K GF    +V NAL+ +Y++ GN   A  VFN M  +
Sbjct: 276 SVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQR 335

Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
           D +S+ SLI+G +  G  ++AL+ F  M +  + PD V V+S+LSAC+ +  L  G+Q H
Sbjct: 336 DEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFH 395

Query: 461 AVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGK 520
           +  +K+G  S + ++ +L+ +Y KC  I  A+  F S  T +V+ W  +++         
Sbjct: 396 SYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLN 455

Query: 521 EALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACM 580
           E+ + + QM   G +P+  T+  +L  CS     +        + K  G +      + +
Sbjct: 456 ESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKT-GFQFNVYVSSVL 514

Query: 581 IDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVH 619
           ID+  + GKL  A  +  ++  E D   W A+++    H
Sbjct: 515 IDMYAKLGKLDHALKIFRRL-KEKDVVSWTAMIAGYAQH 552


>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 905

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 296/754 (39%), Positives = 455/754 (60%), Gaps = 2/754 (0%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
           Q+ +    RD    N++++ Y   G L  A+++F     ++  ++++++  Y+      E
Sbjct: 153 QIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKE 212

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
              LF QM  EG  P + T  N+L   +   +L  G++ H   ++   + +  V T LV 
Sbjct: 213 CLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVT 272

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           M  +C  +  A+  FK   D ++ V +  +I   +Q+G+  +A E +  MR +GV  N+ 
Sbjct: 273 MCVRCGDVDSAKQAFKGIAD-RDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRT 331

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           T+ SIL AC+   A + G  +H  I   G  ++V + +ALI MYA+CGDL  AR L    
Sbjct: 332 TYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTM 391

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              + +SWN++I G+AR+    EA+ L+K+M +  +K    T+  +L+  A++    + K
Sbjct: 392 PKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGK 451

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H  I+++G +    + NAL++MY + G+L  A  VF   Q +DVISW S+I G A HG
Sbjct: 452 MIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHG 511

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
           SYE A K F +M+   + PD++  +S+LS C     LE G+Q+H    +SG    +++ N
Sbjct: 512 SYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGN 571

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           +L+ +Y +CG + DA  VF S+  RDV++WTA+I GCA  G+  +A++ + QM   G +P
Sbjct: 572 ALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRP 631

Query: 537 -DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
            D  TF  +L AC+HAGL       F SM+  YG+ P  +HY C++ LLGR+ +  EA+ 
Sbjct: 632 PDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAET 691

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
           L++QM   PDA VW+ LL ACR+HG++ L E AANN  +L   N   Y+ LSN+Y+ AG+
Sbjct: 692 LINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGR 751

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
           W+D A++R++M+ RGIRKEPG SW+E ++ +H FI+ DR HP   +IY+++  + + ++E
Sbjct: 752 WDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEE 811

Query: 716 AGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
           AGY PD    LH++ +  +E  L  HSE+LA+A+GL+  P G PIRIFKNLR+CGDCHTA
Sbjct: 812 AGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTA 871

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            K+IS +  R II RDSNRFH FK G CSC DYW
Sbjct: 872 SKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 905



 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 158/515 (30%), Positives = 279/515 (54%), Gaps = 8/515 (1%)

Query: 130 RPSQY---TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
           RP++    T   +L+ C+ K LL   ++ H   ++     + F+   L++MY KC+ + +
Sbjct: 21  RPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLD 80

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A  +FK  P  ++ ++W ++I+ Y+Q G+  KA + F +M+  G   N+ T+ SILTAC 
Sbjct: 81  AHQVFKEMPR-RDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACY 139

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
           + +  + G ++H  I+ +G++ +  VQ++L+ MY KCGDL  AR++       + VS+N+
Sbjct: 140 SPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNT 199

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           M+  +A++ + KE L LF +M +  I  D  TY ++L+ F +   L+  K +H L V+ G
Sbjct: 200 MLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEG 259

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
                 V  AL+ M  + G++D A   F  + D+DV+ + +LI   A HG   EA + + 
Sbjct: 260 LNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYY 319

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
            MR  G+  +     SIL+AC+    LE G+ +H+   + G  S + + N+L+ +YA+CG
Sbjct: 320 RMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCG 379

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
            +  A  +F +M  RD+I+W A+I G A+     EA++ Y QM + G KP  +TF+ LL 
Sbjct: 380 DLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLS 439

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           AC+++    + +   E + +  GIK        ++++  R G L+EA+ + +      D 
Sbjct: 440 ACANSSAYADGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQAR-DV 497

Query: 607 TVWKALLSACRVHGDLELGERAANNLF--ELEPMN 639
             W ++++    HG  E   +    +   ELEP N
Sbjct: 498 ISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDN 532



 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 173/611 (28%), Positives = 311/611 (50%), Gaps = 15/611 (2%)

Query: 21  GPARYTHNVGNSVKP-ASDLNRA-----LVDFSNSGEIDEAGQLFEKMSD----RDGFTW 70
           GP R   +V N+ +P  ++ +RA     L + +    + EA ++  +M +     D F  
Sbjct: 8   GPDR--EDVSNTHQPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLS 65

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +I  Y     + +A ++F E P ++  +W+SLI  Y+  G   +AF+LF +MQ  G+ 
Sbjct: 66  NLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFI 125

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P++ T  ++L  C     L+ G++ H   IK  +  +  V   L+ MY KC  +  A  +
Sbjct: 126 PNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQV 185

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F      ++ V++ TM+  Y+Q  Y  + +  F  M  EG+  ++ T+ ++L A    S 
Sbjct: 186 FAGI-SPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSM 244

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            D G ++H   +  G  +++ V +AL+ M  +CGD+DSA++  +     + V +N++I  
Sbjct: 245 LDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAA 304

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
            A+ G + EA   + +M +  + ++  TY S+LN  +++  L   K +HS I + G    
Sbjct: 305 LAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSD 364

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
             + NALI MYA+ G+L  A  +F  M  +D+ISW ++I G A      EA++ +  M+ 
Sbjct: 365 VQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQS 424

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
            G+ P  V    +LSACA  +    G+ +H   L+SG  S+  + N+L+ +Y +CG + +
Sbjct: 425 EGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLME 484

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           A  VF+    RDVI+W ++I G AQ+G  + A + + +M     +PD ITF  +L  C +
Sbjct: 485 AQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKN 544

Query: 551 AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
               E  +     + +  G++   +    +I++  R G L +A+ +   +    D   W 
Sbjct: 545 PEALELGKQIHGRITES-GLQLDVNLGNALINMYIRCGSLQDARNVFHSL-QHRDVMSWT 602

Query: 611 ALLSACRVHGD 621
           A++  C   G+
Sbjct: 603 AMIGGCADQGE 613



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 172/333 (51%), Gaps = 7/333 (2%)

Query: 328 HARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
             R  + D  TY ++L NC    + L  AK +H+ +V+ G     F++N LI+MY K  +
Sbjct: 19  QPRPTETDRATYVALLQNCTRKRL-LPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRS 77

Query: 387 LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSA 446
           +  A  VF  M  +DVISW SLI+  A  G  ++A + F +M+ +G  P+ +   SIL+A
Sbjct: 78  VLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTA 137

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITW 506
           C     LE G+++H+  +K+G      V NSL+ +Y KCG +  A +VF  +  RDV+++
Sbjct: 138 CYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSY 197

Query: 507 TALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA-CSHAGLAENARWYFESMD 565
             ++   AQ    KE L  + QM + G  PD +T++ LL A  + + L E  R +  +++
Sbjct: 198 NTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVE 257

Query: 566 KVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG-DLEL 624
           +  G+         ++ +  R G +  AK    + + + D  V+ AL++A   HG ++E 
Sbjct: 258 E--GLNSDIRVGTALVTMCVRCGDVDSAKQAF-KGIADRDVVVYNALIAALAQHGHNVEA 314

Query: 625 GERAANNLFELEPMNAMPYVQLSNMYSTAGKWE 657
            E+      +   +N   Y+ + N  ST+   E
Sbjct: 315 FEQYYRMRSDGVALNRTTYLSILNACSTSKALE 347



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 12/159 (7%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G++ E     D    N +I  Y   G L++A+ +F+    ++  +W+++I G ++ G D+
Sbjct: 556 GRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDM 615

Query: 116 EAFELFWQMQLEGYRPSQ-YTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG- 173
           +A ELFWQMQ EG+RP    T  ++L  C+  GL+       GY I +  +    V+   
Sbjct: 616 KAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLV-----LEGYQIFSSMESEYGVLPTI 670

Query: 174 -----LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
                LV +  + +   EAE L    P   +   W T++
Sbjct: 671 EHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLL 709


>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
          Length = 920

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 305/754 (40%), Positives = 444/754 (58%), Gaps = 1/754 (0%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            Q++++    + F  N +IA Y   G  + A+++F +  F +  T+++LI G++  G   
Sbjct: 168 AQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGE 227

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
            A ++F +MQL G RP   T+ ++L  C+  G LQ+G+Q H Y +K     +      L+
Sbjct: 228 CALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLL 287

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           D+Y KC  I  A  +F +  D  N V W  M+  Y Q     K+ E F  M+  G+  N+
Sbjct: 288 DLYVKCGDIETAHDIFNL-GDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNK 346

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
           FT+P IL  C      + G Q+H   + +GFE+++YV   LIDMY+K   LD AR++LE 
Sbjct: 347 FTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEM 406

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
            E  + VSW SMI G+ +  F +EAL+ FK+M    +  D+    S  +  A    +   
Sbjct: 407 LEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQG 466

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
             +H+ +  +G+     + N L+++YA+ G  + AF +F  +  KD I+W  LI+G    
Sbjct: 467 LQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQS 526

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
             YE+AL  F  M  +G   +     S +SA A L  ++ G+QVH   +K+G  S   V 
Sbjct: 527 RLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVA 586

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           N+L+ +Y KCG I DA  +F  M  R+ ++W  +I  C+Q+G+G EAL  +DQM   G K
Sbjct: 587 NALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLK 646

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           P+ +TF+G+L ACSH GL E    YF+SM  VYG+ P PDHYAC++D+LGR+G+L  A+ 
Sbjct: 647 PNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARR 706

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
            +D+M    +A +W+ LLSAC+VH ++E+GE AA +L ELEP ++  YV LSN Y+  GK
Sbjct: 707 FVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGK 766

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
           W +  +VRK+MK RGIRKEPG SW+E  + VH F   DR HPL   IY  + E+   + +
Sbjct: 767 WANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSK 826

Query: 716 AGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
            GY  +     H  E+E K+     HSEKLAVAFGL+TLP   P+R+ KNLRVC DCH+ 
Sbjct: 827 IGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSW 886

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           MK+ S V  R I+LRD  RFHHF +G+CSCGDYW
Sbjct: 887 MKFTSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920



 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 175/563 (31%), Positives = 294/563 (52%), Gaps = 19/563 (3%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D    N +I  YA +G + +A+++F E   ++  +W +++ GY+  GL  EAF L+ QM 
Sbjct: 77  DRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMH 136

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
                P+ Y L +VL  C+   L  +G   H    K  F    FV   L+ +Y       
Sbjct: 137 WTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFK 196

Query: 186 EAEYLF--KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
            AE +F   +F D    V + T+I+G++Q G+G  A++ F +M++ G+  +  T  S+L 
Sbjct: 197 LAERVFCDMLFCD---RVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLA 253

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           ACA+V     G Q+H  +L +G   +   + +L+D+Y KCGD+++A  +    +  N V 
Sbjct: 254 ACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVL 313

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN M+V + +     ++  +F +M A  I  + FTYP +L        +   + +HSL +
Sbjct: 314 WNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSI 373

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K GFE   +V+  LIDMY+K   LD A  +  +++ +DV+SWTS+I G   H   EEAL 
Sbjct: 374 KNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALA 433

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            F +M+  G+ PD++ ++S  SACA +  +  G Q+HA    SG  + +S+ N+LV +YA
Sbjct: 434 TFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYA 493

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           +CG   +A  +F  +  +D ITW  LI G  Q+   ++AL  + +M   G K +  TF+ 
Sbjct: 494 RCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFIS 553

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA------CMIDLLGRSGKLIEAKALL 597
            + A   A LA+      +   +V+G      H +       +I L G+ G + +AK + 
Sbjct: 554 AISAL--ANLAD-----IKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIF 606

Query: 598 DQMVGEPDATVWKALLSACRVHG 620
            +M    + + W  ++++C  HG
Sbjct: 607 SEMSLRNEVS-WNTIITSCSQHG 628



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 230/484 (47%), Gaps = 19/484 (3%)

Query: 143 CSLKGLLQRGEQF------HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD 196
           C+L+    RG ++      H  ++      +  +   L+D+YAK   +++A  +FK    
Sbjct: 47  CALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKEL-S 105

Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
            ++HV+W  M++GY+Q G G +A   +  M    V    +   S+L+AC        G  
Sbjct: 106 SRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRM 165

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           +H  +    F +  +V +ALI +Y   G    A R+       + V++N++I G A+ G 
Sbjct: 166 IHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGH 225

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
            + AL +F +M    ++ D  T  S+L   AS  DL   K +HS ++K G         +
Sbjct: 226 GECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGS 285

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           L+D+Y K G+++ A  +FNL    +V+ W  ++          ++ + F  M+ +GI P+
Sbjct: 286 LLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPN 345

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFD 496
                 IL  C     +E G+Q+H++ +K+G  S + V   L+ +Y+K  C++ A ++ +
Sbjct: 346 KFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILE 405

Query: 497 SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS-----HA 551
            +  RDV++WT++I G  Q+   +EAL  + +M   G  PD I       AC+       
Sbjct: 406 MLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQ 465

Query: 552 GLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKA 611
           GL  +AR Y      V G       +  +++L  R G+  EA +L  + +   D   W  
Sbjct: 466 GLQIHARVY------VSGYAADISIWNTLVNLYARCGRSEEAFSLFRE-IDHKDEITWNG 518

Query: 612 LLSA 615
           L+S 
Sbjct: 519 LISG 522



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 78/187 (41%), Gaps = 39/187 (20%)

Query: 30  GNSVKPA----SDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLR 84
           G +VK      +++  AL+  +   G I++A  +F +MS R+  +WNT+I + +  GR  
Sbjct: 572 GRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGR-- 629

Query: 85  EAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCS 144
                                         +EA +LF QM+ EG +P+  T   VL  CS
Sbjct: 630 -----------------------------GLEALDLFDQMKQEGLKPNDVTFIGVLAACS 660

Query: 145 LKGLLQRGEQFHGYAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVA 202
             GL++ G  +   ++   + LN        +VD+  +   +  A       P   N + 
Sbjct: 661 HVGLVEEGLSYFK-SMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMI 719

Query: 203 WTTMITG 209
           W T+++ 
Sbjct: 720 WRTLLSA 726


>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
 gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 295/726 (40%), Positives = 450/726 (61%), Gaps = 5/726 (0%)

Query: 86  AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL 145
           A++LF   P KN  +W++L+ GY+  G   +  +LF +M+    + S++TL  VL+ C+ 
Sbjct: 4   AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63

Query: 146 KGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNH--VAW 203
            G L+ G+  H  A+++  +++ F+   LVDMY+KC  +++A    K+F   +N   VAW
Sbjct: 64  TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDA---LKVFTKIRNPDVVAW 120

Query: 204 TTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS 263
           + MITG  Q G+G +A E F  MR +G   NQFT  S+++    +    +G  +HGCI  
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180

Query: 264 SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSL 323
            GFE++  V + LI MY K   ++   ++ E     + VSWN+++ GF           +
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRI 240

Query: 324 FKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK 383
           F +M     K + FT+ SVL   +S +D    K VH+ I+K   +   FV  AL+DMYAK
Sbjct: 241 FYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAK 300

Query: 384 QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSI 443
              L+ A + F+ + ++D+ SWT +I+G A     E+A+KYF  M+  GI P+   ++S 
Sbjct: 301 ARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASC 360

Query: 444 LSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDV 503
           LS C+ +  LE G+Q+HAV +K+G    + V ++LV +Y KCGC+  A  +F  + +RD+
Sbjct: 361 LSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDI 420

Query: 504 ITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFES 563
           ++W  +I G +Q+G+G++AL+ +  ML+ G  PD  TF+G+L ACS  GL E  +  F+S
Sbjct: 421 VSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDS 480

Query: 564 MDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
           M K+YGI P  +HYACM+D+LGR+GK  E K  +++M   P + +W+ +L AC++HG+++
Sbjct: 481 MSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVD 540

Query: 624 LGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETN 683
            GE+AA  LFE+EPM    Y+ LSN++++ G+W+D   +R LM SRGI+KEPGCSWVE +
Sbjct: 541 FGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVD 600

Query: 684 SQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSE 743
            QVH+F+S+D  HP   +IY+K+D++   +   GYVP     LHNV  + K   L YHSE
Sbjct: 601 GQVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLHNVSNKEKMEHLYYHSE 660

Query: 744 KLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNC 803
           +LA++F LL+     PIRIFKNLR+C DCH  MK IS +  + I++RD  RFHHFK G C
Sbjct: 661 RLALSFALLSTNAVKPIRIFKNLRICEDCHDFMKLISDITNQEIVVRDIRRFHHFKRGTC 720

Query: 804 SCGDYW 809
           SC D W
Sbjct: 721 SCQDRW 726



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/486 (28%), Positives = 254/486 (52%), Gaps = 9/486 (1%)

Query: 39  LNRALVDFSNSGEIDEAGQLFEKMSDRDG-----FTWNTMIAAYANSGRLREAKKLFNET 93
           L+  L   +N+G + E G++   ++ R G     F   +++  Y+  G + +A K+F + 
Sbjct: 54  LSTVLKGCANTGSLRE-GKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKI 112

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE 153
              +   WS++I G    G   EA ELF  M+ +G RP+Q+TL +++   +  G L+ G+
Sbjct: 113 RNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQ 172

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQN 213
             HG   K  F+ +  V   L+ MY K +C+ +   +F+   +  + V+W  +++G+  +
Sbjct: 173 SIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTN-PDLVSWNALLSGFYDS 231

Query: 214 GYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
               +    F  M +EG + N FTF S+L +C+++   +FG QVH  I+ +  + + +V 
Sbjct: 232 QTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVG 291

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
           +AL+DMYAK   L+ A    +     +  SW  +I G+A+    ++A+  F++M    IK
Sbjct: 292 TALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIK 351

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
            +++T  S L+  +    L N + +H++ VK G  G  FV +AL+D+Y K G ++ A  +
Sbjct: 352 PNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAI 411

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           F  +  +D++SW ++I+G + HG  E+AL+ F  M   GI PD      +LSAC+ + ++
Sbjct: 412 FKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLV 471

Query: 454 EFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAKCGCINDANRVFDSMH-TRDVITWTALIM 511
           E G++      K  G + S+     +V +  + G  N+     + M+ T   + W  ++ 
Sbjct: 472 EEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLG 531

Query: 512 GCAQNG 517
            C  +G
Sbjct: 532 ACKLHG 537



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 180/361 (49%), Gaps = 13/361 (3%)

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           ++ A RL       N VSWN+++ G+A+ G  K+ L LF KM   + K   FT  +VL  
Sbjct: 1   MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
            A+   L   K +H+L +++G E  +F+  +L+DMY+K G +  A  VF  +++ DV++W
Sbjct: 61  CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
           +++ITG    G  +EA + F  MR  G  P+   +SS++S    +  L +GQ +H    K
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
            G  S   V N L+++Y K  C+ D N+VF++M   D+++W AL+ G   +       + 
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRI 240

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH----YACMI 581
           + QML  G KP+  TF+ +L +CS     E     F      + IK   D        ++
Sbjct: 241 FYQMLLEGFKPNMFTFISVLRSCSSLLDPE-----FGKQVHAHIIKNSSDDDDFVGTALV 295

Query: 582 DLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAM 641
           D+  ++  L +A    D++V   D   W  ++S    +   +  E+A     +++     
Sbjct: 296 DMYAKARCLEDAGVAFDRLVNR-DIFSWTVIISG---YAQTDQAEKAVKYFRQMQREGIK 351

Query: 642 P 642
           P
Sbjct: 352 P 352



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 158/314 (50%), Gaps = 4/314 (1%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
            + +  SD D F    ++  YA +  L +A   F+    ++ F+W+ +I GY+      +
Sbjct: 278 HIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEK 337

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
           A + F QMQ EG +P++YTL + L  CS    L+ G Q H  A+K     + FV + LVD
Sbjct: 338 AVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVD 397

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           +Y KC C+  AE +FK     ++ V+W T+I+GYSQ+G G KA+E FR M  EG+  ++ 
Sbjct: 398 LYGKCGCMEHAEAIFKGLIS-RDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEA 456

Query: 237 TFPSILTACAAVSARDFGAQVHGCILS-SGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
           TF  +L+AC+ +   + G +    +    G   ++   + ++D+  + G  +  +  +E 
Sbjct: 457 TFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEE 516

Query: 296 SEIDN-EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
             +    + W +++      G         KK+   +  +D  +Y  + N FAS    ++
Sbjct: 517 MNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDS-SYILLSNIFASKGRWDD 575

Query: 355 AKSVHSLIVKTGFE 368
            +++ +L+   G +
Sbjct: 576 VRNIRALMTSRGIK 589


>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
          Length = 1106

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 299/780 (38%), Positives = 468/780 (60%), Gaps = 10/780 (1%)

Query: 39   LNR----ALVDFSNSGEIDEAGQLFEKMSDRDGFT-----WNTMIAAYANSGRLREAKKL 89
            LNR    ++++  ++ +  EAG+L       DG +      N +I+ YA  G L +A++L
Sbjct: 328  LNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKAREL 387

Query: 90   FNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLL 149
            F   P ++  +W+++I GY+      EA  L+ QMQ EG +P + T  ++L  C+     
Sbjct: 388  FYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAY 447

Query: 150  QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
              G+  H   +++    N  +   L++MY +C  + EA+ +F+     ++ ++W +MI G
Sbjct: 448  ADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFE-GTQARDVISWNSMIAG 506

Query: 210  YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
            ++Q+G    A + F++M+ E +E +  TF S+L+ C    A + G Q+HG I  SG + +
Sbjct: 507  HAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLD 566

Query: 270  VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA 329
            V + +ALI+MY +CG L  AR +    +  + +SW +MI G A QG   +A+ LF +M  
Sbjct: 567  VNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQN 626

Query: 330  RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDC 389
               +    T+ S+L    S+  L+  K V + I+ +G+E    V NALI  Y+K G++  
Sbjct: 627  EGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTD 686

Query: 390  AFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE 449
            A  VF+ M  +D++SW  +I G A +G  + A+++   M+   + P+     S+L+AC+ 
Sbjct: 687  AREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSS 746

Query: 450  LTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTAL 509
             + LE G++VHA  +K      + V  +L+ +YAKCG   +A  VFD++  ++V+TW A+
Sbjct: 747  FSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAM 806

Query: 510  IMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG 569
            I   AQ+G   +AL F++ M   G KPD  TF  +L AC+HAGL       F SM+  YG
Sbjct: 807  INAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYG 866

Query: 570  IKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAA 629
            + P  +HY C++ LLGR+ +  EA+ L++QM   PDA VW+ LL ACR+HG++ L E AA
Sbjct: 867  VLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAA 926

Query: 630  NNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIF 689
            NN  +L   N   Y+ LSN+Y+ AG+W+D A++R++M+ RGIRKEPG SW+E ++ +H F
Sbjct: 927  NNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEF 986

Query: 690  ISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAF 749
            I+ DR HP   +IY+++  + + ++EAGY PD    LH++ +  +E  L  HSE+LA+A+
Sbjct: 987  IAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAY 1046

Query: 750  GLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            GL+  P G PIRIFKNLR+CGDCHTA K+IS +  R II RDSNRFH FK G CSC DYW
Sbjct: 1047 GLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCSCEDYW 1106



 Score =  318 bits (814), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 189/621 (30%), Positives = 327/621 (52%), Gaps = 12/621 (1%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
           Q+ +    RD    N++++ Y   G L  A+++F     ++  ++++++  Y+      E
Sbjct: 153 QIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKE 212

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
              LF QM  EG  P + T  N+L   +   +L  G++ H   ++   + +  V T LV 
Sbjct: 213 CLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVT 272

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           M  +C  +  A+  FK   D ++ V +  +I   +Q+G+  +A E +  MR +GV  N+ 
Sbjct: 273 MCVRCGDVDSAKQAFKGTAD-RDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRT 331

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           T+ SIL AC+   A + G  +H  I   G  ++V + +ALI MYA+CGDL  AR L    
Sbjct: 332 TYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTM 391

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              + +SWN++I G+AR+    EA+ L+K+M +  +K    T+  +L+  A++    + K
Sbjct: 392 PKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGK 451

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H  I+++G +    + NAL++MY + G+L  A  VF   Q +DVISW S+I G A HG
Sbjct: 452 MIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHG 511

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
           SYE A K F +M+   + PD++  +S+LS C     LE G+Q+H    +SG    +++ N
Sbjct: 512 SYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGN 571

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           +L+ +Y +CG + DA  VF S+  RDV++WTA+I GCA  G+  +A++ + QM   G +P
Sbjct: 572 ALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRP 631

Query: 537 DYITFVGLLFAC-SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
              TF  +L  C S A L E  +     ++  Y +  G  +   +I    +SG + +A+ 
Sbjct: 632 VKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGN--ALISAYSKSGSMTDARE 689

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP----YVQLSNMYS 651
           + D+M    D   W  +++    +G   LG+ A    ++++  + +P    +V L N  S
Sbjct: 690 VFDKMPSR-DIVSWNKIIAGYAQNG---LGQTAVEFAYQMQEQDVVPNKFSFVSLLNACS 745

Query: 652 TAGKWEDAARVRKLMKSRGIR 672
           +    E+  RV   +  R ++
Sbjct: 746 SFSALEEGKRVHAEIVKRKLQ 766



 Score =  282 bits (721), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 158/515 (30%), Positives = 278/515 (53%), Gaps = 8/515 (1%)

Query: 130 RPSQY---TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
           RP++    T   +L+ C+ K LL   ++ H   ++     + F+   L++MY KC+ + +
Sbjct: 21  RPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLD 80

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A  +FK  P  ++ ++W ++I+ Y+Q G+  KA + F +M+  G   N+ T+ SILTAC 
Sbjct: 81  AHQVFKEMPR-RDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACY 139

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
           + +  + G ++H  I+ +G++ +  VQ++L+ MY KCGDL  AR++       + VS+N+
Sbjct: 140 SPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNT 199

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           M+  +A++ + KE L LF +M +  I  D  TY ++L+ F +   L+  K +H L V+ G
Sbjct: 200 MLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEG 259

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
                 V  AL+ M  + G++D A   F    D+DV+ + +LI   A HG   EA + + 
Sbjct: 260 LNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYY 319

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
            MR  G+  +     SIL+AC+    LE G+ +H+   + G  S + + N+L+ +YA+CG
Sbjct: 320 RMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCG 379

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
            +  A  +F +M  RD+I+W A+I G A+     EA++ Y QM + G KP  +TF+ LL 
Sbjct: 380 DLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLS 439

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           AC+++    + +   E + +  GIK        ++++  R G L+EA+ + +      D 
Sbjct: 440 ACANSSAYADGKMIHEDILR-SGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQAR-DV 497

Query: 607 TVWKALLSACRVHGDLELGERAANNLF--ELEPMN 639
             W ++++    HG  E   +    +   ELEP N
Sbjct: 498 ISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDN 532



 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 163/566 (28%), Positives = 290/566 (51%), Gaps = 3/566 (0%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            Q+ E     D F  N +I  Y     + +A ++F E P ++  +W+SLI  Y+  G   
Sbjct: 51  AQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKK 110

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           +AF+LF +MQ  G+ P++ T  ++L  C     L+ G++ H   IK  +  +  V   L+
Sbjct: 111 KAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLL 170

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
            MY KC  +  A  +F      ++ V++ TM+  Y+Q  Y  + +  F  M  EG+  ++
Sbjct: 171 SMYGKCGDLPRARQVFAGISP-RDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDK 229

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            T+ ++L A    S  D G ++H   +  G  +++ V +AL+ M  +CGD+DSA++  + 
Sbjct: 230 VTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKG 289

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
           +   + V +N++I   A+ G + EA   + +M +  + ++  TY S+LN  +++  L   
Sbjct: 290 TADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAG 349

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           K +HS I + G      + NALI MYA+ G+L  A  +F  M  +D+ISW ++I G A  
Sbjct: 350 KLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARR 409

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
               EA++ +  M+  G+ P  V    +LSACA  +    G+ +H   L+SG  S+  + 
Sbjct: 410 EDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLA 469

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           N+L+ +Y +CG + +A  VF+    RDVI+W ++I G AQ+G  + A + + +M     +
Sbjct: 470 NALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELE 529

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           PD ITF  +L  C +    E  +     + +  G++   +    +I++  R G L +A+ 
Sbjct: 530 PDNITFASVLSGCKNPEALELGKQIHGRITE-SGLQLDVNLGNALINMYIRCGSLQDARN 588

Query: 596 LLDQMVGEPDATVWKALLSACRVHGD 621
           +   +    D   W A++  C   G+
Sbjct: 589 VFHSL-QHRDVMSWTAMIGGCADQGE 613



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 149/488 (30%), Positives = 231/488 (47%), Gaps = 35/488 (7%)

Query: 33  VKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN 91
           +K    L  AL++ +   G + EA  +FE    RD  +WN+MIA +A  G    A KLF 
Sbjct: 462 IKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQ 521

Query: 92  ETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQR 151
           E                               MQ E   P   T  +VL  C     L+ 
Sbjct: 522 E-------------------------------MQNEELEPDNITFASVLSGCKNPEALEL 550

Query: 152 GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYS 211
           G+Q HG   ++   L+  +   L++MY +C  + +A  +F      ++ ++WT MI G +
Sbjct: 551 GKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQH-RDVMSWTAMIGGCA 609

Query: 212 QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVY 271
             G   KAIE F  M+ EG    + TF SIL  C + +  D G +V   IL+SG+E +  
Sbjct: 610 DQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTG 669

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD 331
           V +ALI  Y+K G +  AR + +     + VSWN +I G+A+ G  + A+    +M  +D
Sbjct: 670 VGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQD 729

Query: 332 IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
           +  + F++ S+LN  +S   L   K VH+ IVK   +G   V  ALI MYAK G+   A 
Sbjct: 730 VVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQ 789

Query: 392 MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELT 451
            VF+ + +K+V++W ++I   A HG   +AL +F+ M   GI PD    +SILSAC    
Sbjct: 790 EVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAG 849

Query: 452 VLEFGQQVHAVFLKSGGC-SSLSVDNSLVLVYAKCGCINDANRVFDSMH-TRDVITWTAL 509
           ++  G Q+ +      G   ++     LV +  +     +A  + + M    D   W  L
Sbjct: 850 LVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETL 909

Query: 510 IMGCAQNG 517
           +  C  +G
Sbjct: 910 LGACRIHG 917



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 170/333 (51%), Gaps = 7/333 (2%)

Query: 328 HARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
             R  + +  TY ++L NC    + L  AK +H+ +V+       F++N LI+MY K  +
Sbjct: 19  QPRPTETERATYVALLQNCTRKRL-LPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRS 77

Query: 387 LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSA 446
           +  A  VF  M  +DVISW SLI+  A  G  ++A + F +M+ +G  P+ +   SIL+A
Sbjct: 78  VLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTA 137

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITW 506
           C     LE G+++H+  +K+G      V NSL+ +Y KCG +  A +VF  +  RDV+++
Sbjct: 138 CYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSY 197

Query: 507 TALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA-CSHAGLAENARWYFESMD 565
             ++   AQ    KE L  + QM + G  PD +T++ LL A  + + L E  R +  +++
Sbjct: 198 NTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVE 257

Query: 566 KVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG-DLEL 624
           +  G+         ++ +  R G +  AK    +   + D  V+ AL++A   HG ++E 
Sbjct: 258 E--GLNSDIRVGTALVTMCVRCGDVDSAKQAF-KGTADRDVVVYNALIAALAQHGHNVEA 314

Query: 625 GERAANNLFELEPMNAMPYVQLSNMYSTAGKWE 657
            E+      +   +N   Y+ + N  ST+   E
Sbjct: 315 FEQYYRMRSDGVALNRTTYLSILNACSTSKALE 347


>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1005

 Score =  595 bits (1535), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 293/744 (39%), Positives = 454/744 (61%), Gaps = 1/744 (0%)

Query: 66   DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
            D F  + ++  YA  G +  A+++F   P +N  +W++L+ G++  G   +   LF +M 
Sbjct: 263  DLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMT 322

Query: 126  LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
                  S++TL  VL+ C+  G L+ G+  H  AI+   +L+ F+   LVDMY+KC    
Sbjct: 323  GSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAG 382

Query: 186  EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            +A  +F    D  + V+W+ +IT   Q G   +A E F+ MR  GV  NQFT  S+++A 
Sbjct: 383  DALKVFVRIED-PDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAA 441

Query: 246  AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
              +    +G  +H C+   GFE +  V +AL+ MY K G +    R+ E +   + +SWN
Sbjct: 442  TDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWN 501

Query: 306  SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
            +++ GF         L +F +M A     + +T+ S+L   +S  D++  K VH+ IVK 
Sbjct: 502  ALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKN 561

Query: 366  GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
              +G  FV  AL+DMYAK   L+ A  +FN +  +D+ +WT ++ G A  G  E+A+K F
Sbjct: 562  SLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCF 621

Query: 426  SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
              M+  G+ P+   ++S LS C+ +  L+ G+Q+H++ +K+G    + V ++LV +YAKC
Sbjct: 622  IQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKC 681

Query: 486  GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
            GC+ DA  VFD + +RD ++W  +I G +Q+G+G +AL+ ++ ML  GT PD +TF+G+L
Sbjct: 682  GCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVL 741

Query: 546  FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
             ACSH GL E  + +F S+ K+YGI P  +HYACM+D+LGR+GK  E ++ +++M    +
Sbjct: 742  SACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSN 801

Query: 606  ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
              +W+ +L AC++HG++E GERAA  LFELEP     Y+ LSNM++  G W+D   VR L
Sbjct: 802  VLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRAL 861

Query: 666  MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFA 725
            M +RG++KEPGCSWVE N QVH+F+S D  HP   +I+ K+ ++   +   GY P+ +  
Sbjct: 862  MSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHV 921

Query: 726  LHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLR 785
            LHNV +  K+  L YHSE+LA+AF LL+      IRIFKNLR+CGDCH  MK IS +  +
Sbjct: 922  LHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQ 981

Query: 786  HIILRDSNRFHHFKAGNCSCGDYW 809
             +++RD N FHHFK G+CSC ++W
Sbjct: 982  ELVVRDINCFHHFKNGSCSCQNFW 1005



 Score =  289 bits (740), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 178/546 (32%), Positives = 295/546 (54%), Gaps = 25/546 (4%)

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           R  QY+   +LR C+ KG L  G+  HG  IK+  + ++ +   LV++YAKC     A  
Sbjct: 127 RLRQYS--GMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACK 184

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +F   P+ ++ V+WT +ITG+   GYG  A+  F +MR EGVE+N+FT+ + L AC+   
Sbjct: 185 VFGEIPE-RDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCL 243

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
             +FG QVH   +  G  ++++V SAL+D+YAKCG++  A R+       N VSWN+++ 
Sbjct: 244 DLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLN 303

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           GFA+ G  ++ L+LF +M   +I    FT  +VL   A++ +L   + VHSL ++ G E 
Sbjct: 304 GFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCEL 363

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
            +F++  L+DMY+K G    A  VF  ++D DV+SW+++IT     G   EA + F  MR
Sbjct: 364 DEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMR 423

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
            SG+ P+   ++S++SA  +L  L +G+ +HA   K G     +V N+LV +Y K G + 
Sbjct: 424 HSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQ 483

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
           D  RVF++   RD+I+W AL+ G   N      L+ ++QMLA G  P+  TF+ +L +CS
Sbjct: 484 DGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCS 543

Query: 550 H-----AGLAENARWYFESMDKVYGIKPGPDHYA-CMIDLLGRSGKLIEAKALLDQMVGE 603
                  G   +A+    S+D       G D     ++D+  ++  L +A+ + ++++ +
Sbjct: 544 SLSDVDLGKQVHAQIVKNSLD-------GNDFVGTALVDMYAKNRFLEDAETIFNRLI-K 595

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
            D   W  +++     G    GE+A     +++     P     N ++ A      +R+ 
Sbjct: 596 RDLFAWTVIVAGYAQDGQ---GEKAVKCFIQMQREGVKP-----NEFTLASSLSGCSRIA 647

Query: 664 KLMKSR 669
            L   R
Sbjct: 648 TLDSGR 653



 Score =  286 bits (731), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 180/626 (28%), Positives = 307/626 (49%), Gaps = 25/626 (3%)

Query: 17  SKIIGPARYTHNVGNSVKPASDLNRAL--VDFSNSGEIDE-------------------- 54
           SK+  P R     GN +    +  R    +DF + G + +                    
Sbjct: 91  SKLSSPNRPNSTPGNKIPETVEKKRIWRGLDFDSKGRLRQYSGMLRTCASKGDLNEGKAI 150

Query: 55  AGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLD 114
            GQ+ +   + D   WN+++  YA  G    A K+F E P ++  +W++LI G+   G  
Sbjct: 151 HGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYG 210

Query: 115 IEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
             A  LF +M+ EG   +++T    L+ CS+   L+ G+Q H  AIK     + FV + L
Sbjct: 211 SGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSAL 270

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           VD+YAKC  +  AE +F   P  +N V+W  ++ G++Q G   K +  F  M    +  +
Sbjct: 271 VDLYAKCGEMVLAERVFLCMPK-QNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFS 329

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
           +FT  ++L  CA       G  VH   +  G E + ++   L+DMY+KCG    A ++  
Sbjct: 330 KFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFV 389

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
             E  + VSW+++I    ++G  +EA  +FK+M    +  + FT  S+++      DL  
Sbjct: 390 RIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYY 449

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
            +S+H+ + K GFE    V NAL+ MY K G++     VF    ++D+ISW +L++G   
Sbjct: 450 GESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHD 509

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
           + + +  L+ F+ M   G  P+     SIL +C+ L+ ++ G+QVHA  +K+    +  V
Sbjct: 510 NETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFV 569

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
             +LV +YAK   + DA  +F+ +  RD+  WT ++ G AQ+G+G++A++ + QM   G 
Sbjct: 570 GTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGV 629

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAK 594
           KP+  T    L  CS     ++ R    SM    G        + ++D+  + G + +A+
Sbjct: 630 KPNEFTLASSLSGCSRIATLDSGR-QLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAE 688

Query: 595 ALLDQMVGEPDATVWKALLSACRVHG 620
            + D +V   D   W  ++     HG
Sbjct: 689 VVFDGLVSR-DTVSWNTIICGYSQHG 713



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 159/319 (49%), Gaps = 12/319 (3%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            Q+ +   D + F    ++  YA +  L +A+ +FN    ++ F W+ ++ GY+  G   
Sbjct: 556 AQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGE 615

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           +A + F QMQ EG +P+++TL + L  CS    L  G Q H  AIK     + FV + LV
Sbjct: 616 KAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALV 675

Query: 176 DMYAKCKCIFEAEYLFKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
           DMYAKC C+ +AE +F    DG   ++ V+W T+I GYSQ+G G KA++ F  M  EG  
Sbjct: 676 DMYAKCGCVEDAEVVF----DGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTV 731

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSS--GFEANVYVQSALIDMYAKCGDLDSAR 290
            ++ TF  +L+AC+ +   + G + H   LS   G    +   + ++D+  + G      
Sbjct: 732 PDEVTFIGVLSACSHMGLIEEGKK-HFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVE 790

Query: 291 RLLEYSEI-DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
             +E  ++  N + W +++      G  +       K+   + +ID   Y  + N FA+ 
Sbjct: 791 SFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDS-NYILLSNMFAAK 849

Query: 350 IDLNNAKSVHSLIVKTGFE 368
              ++  +V +L+   G +
Sbjct: 850 GMWDDVTNVRALMSTRGVK 868


>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
 gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
          Length = 989

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 300/752 (39%), Positives = 452/752 (60%), Gaps = 1/752 (0%)

Query: 58  LFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEA 117
           +F+  S  + +  N ++  Y+       A+K+F++   K+  +++SLI G +  G    A
Sbjct: 239 VFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGA 298

Query: 118 FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
            ELF +M+ +  +P   T+ ++L  C+  G L +GEQ H Y IK     +  V   L+D+
Sbjct: 299 LELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDL 358

Query: 178 YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
           Y  C  I  A  +F +    +N V W  M+  + +     ++   FR M+++G+  NQFT
Sbjct: 359 YVNCSDIKTAHEMF-LTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFT 417

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           +PSIL  C +V A D G Q+H  ++ +GF+ NVYV S LIDMYAK G LD+A  +L    
Sbjct: 418 YPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLT 477

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
            D+ VSW ++I G+A+     EAL  FK+M  R I+ D+  + S ++  A    LN  + 
Sbjct: 478 EDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQ 537

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           +H+    +G+     + NAL+ +YA+ G +  A++ F  +  KD ISW  LI+G A  G 
Sbjct: 538 IHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGY 597

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
            E+ALK F+ M  + +        S +SA A +  ++ G+Q+HA+ +K G  S + V N+
Sbjct: 598 CEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNA 657

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
           L+  YAKCG I DA R F  M  ++ ++W A+I G +Q+G G EA+  +++M   G  P+
Sbjct: 658 LITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPN 717

Query: 538 YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALL 597
           ++TFVG+L ACSH GL      YFESM K +G+ P P HYAC++DL+ R+G L  A+  +
Sbjct: 718 HVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFI 777

Query: 598 DQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWE 657
           ++M  EPDAT+W+ LLSAC VH ++E+GE AA +L ELEP ++  YV LSNMY+ +GKW+
Sbjct: 778 EEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWD 837

Query: 658 DAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAG 717
              + R++M++RG++KEPG SW+E  + VH F   DR HPL   IY  + E+     E G
Sbjct: 838 CRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNKKAAEIG 897

Query: 718 YVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMK 777
           Y  D    L++VE+E K+  +  HSEKLA+ FGLL+L    PI + KNLRVC DCH+ +K
Sbjct: 898 YFQDRYSLLNDVEQEQKDPTVYIHSEKLAITFGLLSLSDTVPIHVMKNLRVCKDCHSWIK 957

Query: 778 YISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           ++S +  R II+RD+ RFHHF+ G CSC DYW
Sbjct: 958 FVSKISNRAIIVRDAYRFHHFEGGICSCKDYW 989



 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 169/574 (29%), Positives = 281/574 (48%), Gaps = 10/574 (1%)

Query: 48  NSGEIDEAGQLFEKMSD----RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSS 103
           NSG + E  +L  K+       +    N ++  Y   G L    K+F + P ++  +W  
Sbjct: 22  NSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDK 81

Query: 104 LIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL-LQRGEQFHGYAIKT 162
           +I G+    +     +LF  M  E   P++ +  +VLR CS   + ++  EQ H   I  
Sbjct: 82  IISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICH 141

Query: 163 CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIEC 222
               +  +   L+ +YAK   I  A  +F      K+ V+W  MI+G+SQNGY  +AI  
Sbjct: 142 GLLCSPIISNPLIGLYAKNGLIISARKVFDNLCT-KDSVSWVAMISGFSQNGYEEEAIHL 200

Query: 223 FRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK 282
           F +M   G+    + F S+L+ C  +   D G Q+H  +   G     YV +AL+ +Y++
Sbjct: 201 FCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSR 260

Query: 283 CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
             +  SA ++    +  +EVS+NS+I G A+QGF   AL LF KM    +K D  T  S+
Sbjct: 261 MPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASL 320

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV 402
           L+  ASN  L   + +HS ++K G      V  AL+D+Y    ++  A  +F   Q ++V
Sbjct: 321 LSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENV 380

Query: 403 ISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAV 462
           + W  ++       +  E+ + F  M+I G+ P+     SIL  C  +  L+ G+Q+H  
Sbjct: 381 VLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQ 440

Query: 463 FLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEA 522
            +K+G   ++ V + L+ +YAK G ++ A+ +  ++   DV++WTALI G AQ+    EA
Sbjct: 441 VIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEA 500

Query: 523 LQFYDQMLARGTKPDYITFVGLLFACSHAGL-AENARWYFESMDKVYGIKPGPDHYACMI 581
           L+ + +ML RG + D I F   + AC  AG+ A N      +   V G          ++
Sbjct: 501 LKHFKEMLNRGIQSDNIGFSSAISAC--AGIQALNQGRQIHAQSYVSGYSEDLSIGNALV 558

Query: 582 DLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
            L  R G++ EA    ++ +   D+  W  L+S 
Sbjct: 559 SLYARCGRIKEAYLEFEK-IDAKDSISWNGLISG 591



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 144/489 (29%), Positives = 247/489 (50%), Gaps = 18/489 (3%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           +L LC   G L   ++ HG  +K  F   + +   LVD+Y     + + + + K+F D  
Sbjct: 16  LLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYF---ALGDLDGVVKVFEDMP 72

Query: 199 NHV--AWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA--VSARDFG 254
           N    +W  +I+G+ +     + ++ F  M  E V   + +F S+L AC+   +  R + 
Sbjct: 73  NRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIR-YA 131

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
            Q+H  I+  G   +  + + LI +YAK G + SAR++ +     + VSW +MI GF++ 
Sbjct: 132 EQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQN 191

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
           G+ +EA+ LF +MH   I    + + SVL+        +  + +H+L+ K G     +V 
Sbjct: 192 GYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVC 251

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           NAL+ +Y++  N   A  VF+ MQ KD +S+ SLI+G A  G  + AL+ F+ M+   + 
Sbjct: 252 NALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLK 311

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           PD V V+S+LSACA    L  G+Q+H+  +K+G  S + V+ +L+ +Y  C  I  A+ +
Sbjct: 312 PDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEM 371

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
           F +  T +V+ W  +++   +     E+ + + QM  +G  P+  T+  +L  C+  G  
Sbjct: 372 FLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGAL 431

Query: 555 ENARWYFESMDKVYGIKPGPDH--YAC--MIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
           +        +     IK G     Y C  +ID+  + GKL  A  +L  +  E D   W 
Sbjct: 432 DLGEQIHTQV-----IKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLT-EDDVVSWT 485

Query: 611 ALLSACRVH 619
           AL+S    H
Sbjct: 486 ALISGYAQH 494



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 147/335 (43%), Gaps = 34/335 (10%)

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
           M  R I  +  TY  +L+   ++  L   K +H  I+K GF     + N L+D+Y   G+
Sbjct: 1   MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60

Query: 387 LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSA 446
           LD    VF  M ++ V SW  +I+G          L  FS M    + P  +  +S+L A
Sbjct: 61  LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120

Query: 447 CAELTV-LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
           C+   + + + +Q+HA  +  G   S  + N L+ +YAK G I  A +VFD++ T+D ++
Sbjct: 121 CSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVS 180

Query: 506 WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWY----- 560
           W A+I G +QNG  +EA+  + +M   G  P    F  +L  C+   L +          
Sbjct: 181 WVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVF 240

Query: 561 -----------------------FESMDKVYGIKPGPDH--YACMIDLLGRSGKLIEAKA 595
                                  F S +KV+      D   +  +I  L + G    A  
Sbjct: 241 KYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALE 300

Query: 596 LLDQMVGE---PDATVWKALLSACRVHGDLELGER 627
           L  +M  +   PD     +LLSAC  +G L  GE+
Sbjct: 301 LFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQ 335



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 125/279 (44%), Gaps = 47/279 (16%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           +  ALV  ++  G I EA   FEK+  +D  +WN +I+ +A SG   +A K+F       
Sbjct: 553 IGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFA------ 606

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                                    QM       S +T  + +   +    +++G+Q H 
Sbjct: 607 -------------------------QMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHA 641

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
             IK  FD +  V   L+  YAKC  I +A   F   P+ KN V+W  MITGYSQ+GYG 
Sbjct: 642 MIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPE-KNDVSWNAMITGYSQHGYGN 700

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG-------AQVHGCILSSGFEANV 270
           +A+  F  M+  G   N  TF  +L+AC+ V     G       ++ HG +      A V
Sbjct: 701 EAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACV 760

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMI 308
                 +D+ ++ G L  AR+ +E   I+ + + W +++
Sbjct: 761 ------VDLISRAGFLSRARKFIEEMPIEPDATIWRTLL 793



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 6/124 (4%)

Query: 38  DLNRALVDF-SNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP-- 94
           +++ AL+ F +  G I++A + F +M +++  +WN MI  Y+  G   EA  LF +    
Sbjct: 653 EVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQV 712

Query: 95  --FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQR 151
               N  T+  ++   S+ GL  +    F  M  E G  P       V+ L S  G L R
Sbjct: 713 GEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSR 772

Query: 152 GEQF 155
             +F
Sbjct: 773 ARKF 776


>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
          Length = 877

 Score =  592 bits (1527), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 306/745 (41%), Positives = 452/745 (60%), Gaps = 2/745 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPF-KNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           D F  N ++A Y   G + +A+++FNE    +N  +W+ L+  Y       +A ++F +M
Sbjct: 134 DVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEM 193

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
              G +P+++    V+  C+    ++ G Q H   ++  +D + F    LVDMY K   +
Sbjct: 194 VWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRV 253

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
             A  +F+  PD  + V+W  +I+G   NG+  +AIE    M+  G+  N FT  SIL A
Sbjct: 254 DIASVIFEKMPD-SDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKA 312

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C+   A D G Q+HG ++ +  +++ Y+   L+DMYAK   LD AR++ ++    + +  
Sbjct: 313 CSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILC 372

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N++I G +  G H EALSLF ++    + ++  T  +VL   AS    +  + VH+L VK
Sbjct: 373 NALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVK 432

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            GF     V N LID Y K   L  A  VF      D+I+ TS+IT  +     E A+K 
Sbjct: 433 IGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKL 492

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           F +M   G+ PD  V+SS+L+ACA L+  E G+QVHA  +K    S     N+LV  YAK
Sbjct: 493 FMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAK 552

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG I DA   F S+  R V++W+A+I G AQ+G GK AL+ + +M+  G  P++IT   +
Sbjct: 553 CGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSV 612

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L AC+HAGL + A+ YF SM +++GI    +HY+CMIDLLGR+GKL +A  L++ M  + 
Sbjct: 613 LCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQA 672

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
           +A++W ALL A RVH D ELG+ AA  LF LEP  +  +V L+N Y++AG W + A+VRK
Sbjct: 673 NASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRK 732

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
           LMK   I+KEP  SW+E   +VH FI  D+ HP+  +IY+K+ E+  L+ +AG+VP+++ 
Sbjct: 733 LMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDV 792

Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
            LH+++   KE+ L++HSE+LAVAF LL+ P GAPIR+ KNLR+C DCH A K+IS +  
Sbjct: 793 DLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIVS 852

Query: 785 RHIILRDSNRFHHFKAGNCSCGDYW 809
           R II+RD NRFHHF+ G CSCGDYW
Sbjct: 853 REIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 142/465 (30%), Positives = 239/465 (51%), Gaps = 10/465 (2%)

Query: 54  EAGQLFEKMS-----DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY 108
           EAG+    M      D+D FT N ++  Y   GR+  A  +F + P  +  +W++LI G 
Sbjct: 219 EAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGC 278

Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA 168
              G D  A EL  QM+  G  P+ +TL ++L+ CS  G    G Q HG+ IK   D + 
Sbjct: 279 VLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDD 338

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFK-MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR 227
           ++  GLVDMYAK   + +A  +F  MF   ++ +    +I+G S  G   +A+  F ++R
Sbjct: 339 YIGVGLVDMYAKNHFLDDARKVFDWMFH--RDLILCNALISGCSHGGRHDEALSLFYELR 396

Query: 228 VEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLD 287
            EG+  N+ T  ++L + A++ A     QVH   +  GF  + +V + LID Y KC  L 
Sbjct: 397 KEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLS 456

Query: 288 SARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFA 347
            A R+ E     + ++  SMI   ++    + A+ LF +M  + ++ D F   S+LN  A
Sbjct: 457 DANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACA 516

Query: 348 SNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTS 407
           S       K VH+ ++K  F    F  NAL+  YAK G+++ A + F+ + ++ V+SW++
Sbjct: 517 SLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSA 576

Query: 408 LITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG 467
           +I G A HG  + AL+ F  M   GI P+H+ ++S+L AC    +++  ++      +  
Sbjct: 577 MIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMF 636

Query: 468 GCSSLSVDNS-LVLVYAKCGCINDANRVFDSMHTR-DVITWTALI 510
           G        S ++ +  + G ++DA  + +SM  + +   W AL+
Sbjct: 637 GIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALL 681



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 188/368 (51%), Gaps = 7/368 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G + +  +D D +    ++  YA +  L +A+K+F+    ++    ++LI G S+ G   
Sbjct: 327 GFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHD 386

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  LF++++ EG   ++ TL  VL+  +         Q H  A+K  F  +A VV GL+
Sbjct: 387 EALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLI 446

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           D Y KC C+ +A  +F+    G + +A T+MIT  SQ  +G  AI+ F +M  +G+E + 
Sbjct: 447 DSYWKCSCLSDANRVFEECSSG-DIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDP 505

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
           F   S+L ACA++SA + G QVH  ++   F ++ +  +AL+  YAKCG ++ A   L +
Sbjct: 506 FVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAE--LAF 563

Query: 296 SEIDNE--VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDL 352
           S +     VSW++MI G A+ G  K AL LF +M    I  +  T  SVL  C  + +  
Sbjct: 564 SSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVD 623

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITG 411
              +  +S+    G +  +   + +ID+  + G LD A  + N M    +   W +L+  
Sbjct: 624 EAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGA 683

Query: 412 CAYHGSYE 419
              H   E
Sbjct: 684 SRVHKDPE 691



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 10/179 (5%)

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
            +S  L+  A    L  G  +HA  LKSG  +S    N L+  Y+KC     A R FD +
Sbjct: 6   TISQQLTRYAAAQALLPGAHLHASLLKSGSLASFR--NHLISFYSKCRRPCCARRFFDEI 63

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENAR 558
                ++W++L+   + NG  + A+Q +  M A G   +      +L     A L     
Sbjct: 64  PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQV- 122

Query: 559 WYFESMDKVYGIKPGPDHYA--CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
               +M    G   G D +    ++ + G  G + +A+ + ++   E +A  W  L+SA
Sbjct: 123 ---HAMAMATGF--GSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSA 176


>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
 gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
          Length = 877

 Score =  592 bits (1527), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 306/745 (41%), Positives = 452/745 (60%), Gaps = 2/745 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPF-KNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           D F  N ++A Y   G + +A+++FNE    +N  +W+ L+  Y       +A ++F +M
Sbjct: 134 DVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEM 193

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
              G +P+++    V+  C+    ++ G Q H   ++  +D + F    LVDMY K   +
Sbjct: 194 VWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRV 253

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
             A  +F+  PD  + V+W  +I+G   NG+  +AIE    M+  G+  N FT  SIL A
Sbjct: 254 DIASVIFEKMPD-SDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKA 312

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C+   A D G Q+HG ++ +  +++ Y+   L+DMYAK   LD AR++ ++    + +  
Sbjct: 313 CSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILC 372

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N++I G +  G H EALSLF ++    + ++  T  +VL   AS    +  + VH+L VK
Sbjct: 373 NALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVK 432

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            GF     V N LID Y K   L  A  VF      D+I+ TS+IT  +     E A+K 
Sbjct: 433 IGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKL 492

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           F +M   G+ PD  V+SS+L+ACA L+  E G+QVHA  +K    S     N+LV  YAK
Sbjct: 493 FMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAK 552

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG I DA   F S+  R V++W+A+I G AQ+G GK AL+ + +M+  G  P++IT   +
Sbjct: 553 CGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSV 612

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L AC+HAGL + A+ YF SM +++GI    +HY+CMIDLLGR+GKL +A  L++ M  + 
Sbjct: 613 LCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQA 672

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
           +A++W ALL A RVH D ELG+ AA  LF LEP  +  +V L+N Y++AG W + A+VRK
Sbjct: 673 NASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRK 732

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
           LMK   I+KEP  SW+E   +VH FI  D+ HP+  +IY+K+ E+  L+ +AG+VP+++ 
Sbjct: 733 LMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDV 792

Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
            LH+++   KE+ L++HSE+LAVAF LL+ P GAPIR+ KNLR+C DCH A K+IS +  
Sbjct: 793 DLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIVS 852

Query: 785 RHIILRDSNRFHHFKAGNCSCGDYW 809
           R II+RD NRFHHF+ G CSCGDYW
Sbjct: 853 REIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 142/465 (30%), Positives = 239/465 (51%), Gaps = 10/465 (2%)

Query: 54  EAGQLFEKMS-----DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY 108
           EAG+    M      D+D FT N ++  Y   GR+  A  +F + P  +  +W++LI G 
Sbjct: 219 EAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGC 278

Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA 168
              G D  A EL  QM+  G  P+ +TL ++L+ CS  G    G Q HG+ IK   D + 
Sbjct: 279 VLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDD 338

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFK-MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR 227
           ++  GLVDMYAK   + +A  +F  MF   ++ +    +I+G S  G   +A+  F ++R
Sbjct: 339 YIGVGLVDMYAKNHFLDDARKVFDWMFH--RDLILCNALISGCSHGGRHDEALSLFYELR 396

Query: 228 VEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLD 287
            EG+  N+ T  ++L + A++ A     QVH   +  GF  + +V + LID Y KC  L 
Sbjct: 397 KEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLS 456

Query: 288 SARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFA 347
            A R+ E     + ++  SMI   ++    + A+ LF +M  + ++ D F   S+LN  A
Sbjct: 457 DANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACA 516

Query: 348 SNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTS 407
           S       K VH+ ++K  F    F  NAL+  YAK G+++ A + F+ + ++ V+SW++
Sbjct: 517 SLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSA 576

Query: 408 LITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG 467
           +I G A HG  + AL+ F  M   GI P+H+ ++S+L AC    +++  ++      +  
Sbjct: 577 MIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMF 636

Query: 468 GCSSLSVDNS-LVLVYAKCGCINDANRVFDSMHTR-DVITWTALI 510
           G        S ++ +  + G ++DA  + +SM  + +   W AL+
Sbjct: 637 GIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALL 681



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 188/368 (51%), Gaps = 7/368 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G + +  +D D +    ++  YA +  L +A+K+F+    ++    ++LI G S+ G   
Sbjct: 327 GFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHD 386

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  LF++++ EG   ++ TL  VL+  +         Q H  A+K  F  +A VV GL+
Sbjct: 387 EALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLI 446

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           D Y KC C+ +A  +F+    G + +A T+MIT  SQ  +G  AI+ F +M  +G+E + 
Sbjct: 447 DSYWKCSCLSDANRVFEECSSG-DIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDP 505

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
           F   S+L ACA++SA + G QVH  ++   F ++ +  +AL+  YAKCG ++ A   L +
Sbjct: 506 FVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAE--LAF 563

Query: 296 SEIDNE--VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDL 352
           S +     VSW++MI G A+ G  K AL LF +M    I  +  T  SVL  C  + +  
Sbjct: 564 SSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVD 623

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITG 411
              +  +S+    G +  +   + +ID+  + G LD A  + N M    +   W +L+  
Sbjct: 624 EAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGA 683

Query: 412 CAYHGSYE 419
              H   E
Sbjct: 684 SRVHKDPE 691



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 10/179 (5%)

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
            +S  L+  A    L  G  +HA  LKSG  +S    N L+  Y+KC     A RVFD +
Sbjct: 6   TISQQLTRYAAAQALLPGAHLHASLLKSGSLASFR--NHLISFYSKCRRPCCARRVFDEI 63

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENAR 558
                ++W++L+   + NG  + A+Q +  M A G   +      +L     A L     
Sbjct: 64  PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQV- 122

Query: 559 WYFESMDKVYGIKPGPDHYA--CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
               +M    G   G D +    ++ + G  G + +A+ + ++   E +A  W  L+SA
Sbjct: 123 ---HAMAMATGF--GSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSA 176


>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Vitis vinifera]
          Length = 1058

 Score =  592 bits (1526), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 329/845 (38%), Positives = 480/845 (56%), Gaps = 79/845 (9%)

Query: 29   VGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKK 88
            VG +++  + L   L  ++  G I+EA ++FE M++R+  +WN MI+ Y  +G L+ A+K
Sbjct: 229  VGKNIRTWTIL---LTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARK 285

Query: 89   LFNETPFKNFFTWSSLIYGYSNYGLDIEAFELF----------WQMQLEGY--------- 129
            LF+E P KN  +W+S++ GY +     EA ELF          W + + GY         
Sbjct: 286  LFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEA 345

Query: 130  ------------RPSQYTLDNVLRLCSLKGL--LQRGEQFHGYAIKTCFDLNAFVVTGLV 175
                        RP Q     V+ L ++ GL  L+        AIKT ++ +  V + ++
Sbjct: 346  WDVFVKMCRTVARPDQSIF--VVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAIL 403

Query: 176  DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
            + Y +   +  A + F+  P+ +N  +WTTMI  ++Q G    AI+ +   RV   E   
Sbjct: 404  NAYTRNGSLDLAMHFFETMPE-RNEYSWTTMIAAFAQCGRLDDAIQLYE--RVP--EQTV 458

Query: 236  FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
             T  +++TA A V       Q    I       NV   +A+I  Y + G L  A+ L + 
Sbjct: 459  ATKTAMMTAYAQVGR----IQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQK 514

Query: 296  SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
              + N  SW +MI GF +    +EAL L  ++H       D ++ S L+  A+  D+   
Sbjct: 515  MPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIG 574

Query: 356  KSVHSLIVKTGFEGYKFVNNALIDMYAKQGN----------------------------- 386
            + +HSL +KTG +   +V N LI MYAK GN                             
Sbjct: 575  RVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSEN 634

Query: 387  --LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
              LD A +VF  M  +DV+SWT++I+     G  E AL  F DM   GI P+ + V+S+L
Sbjct: 635  YMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLL 694

Query: 445  SACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVI 504
            SAC  L  ++ G+Q HA+  K G  + L V NSL+ +Y KCG   D   VF+ M   D+I
Sbjct: 695  SACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLI 753

Query: 505  TWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESM 564
            TW A+++GCAQNG GKEA++ ++QM   G  PD ++F+G+L ACSHAGL +    +F SM
Sbjct: 754  TWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSM 813

Query: 565  DKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLEL 624
             + YGI P   HY CM+DLLGR+G L EA+AL++ M  +PD+ +W+ALL ACR+H ++EL
Sbjct: 814  TQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVEL 873

Query: 625  GERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNS 684
            G+R A  LF++    +  YV LSN++++ G W+  A +RKLMK +G+ KEPG SW++  +
Sbjct: 874  GQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKN 933

Query: 685  QVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEK 744
            ++H F++ DR H    +IYS + E     +  GY+PD NF LH+VEEE K+  L YHSEK
Sbjct: 934  KLHCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTNFVLHDVEEEQKQNELLYHSEK 993

Query: 745  LAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCS 804
            LAV FG+L+ P G+PI+I KNLR+CGDCHT MK++S V LR II+RD NRFHHF+ G+CS
Sbjct: 994  LAVVFGILSTPNGSPIQIIKNLRICGDCHTFMKFMSKVTLRKIIIRDGNRFHHFRDGSCS 1053

Query: 805  CGDYW 809
            CGDYW
Sbjct: 1054 CGDYW 1058



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 185/674 (27%), Positives = 299/674 (44%), Gaps = 99/674 (14%)

Query: 24  RYTHNVGNSVKPASDL---NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANS 80
           R+     N   P + L   N  + +    G ++EA ++F +M  RD  +WN+MI  Y+ +
Sbjct: 156 RHKSGAKNKETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQN 215

Query: 81  GRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVL 140
           G++ EA+ LF+    KN  TW+ L+ GY+  G   EA E+F  M          T  NV+
Sbjct: 216 GKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESM----------TERNVV 265

Query: 141 RLCSL-KGLLQRGEQ------FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKM 193
              ++  G +Q G+       F     K     N+ VVTG    Y  C  + EA  LF  
Sbjct: 266 SWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNS-VVTG----YCHCYRMSEARELFDQ 320

Query: 194 FPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDF 253
            P+ +N V+W  MI+GY      ++A + F  M       +Q  F  +L+A   +   + 
Sbjct: 321 MPE-RNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLEL 379

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
              +    + +G+E +V V SA+++ Y + G LD A    E     NE SW +MI  FA+
Sbjct: 380 IGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQ 439

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
            G   +A+ L++++  + +     T  +++  +A    +  A+ +   I+      +   
Sbjct: 440 CGRLDDAIQLYERVPEQTVA----TKTAMMTAYAQVGRIQKARLIFDEILNPNVVAW--- 492

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
            NA+I  Y + G L  A  +F  M  K+  SW ++I G   +    EAL+   ++  SG 
Sbjct: 493 -NAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGS 551

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG------- 486
            P     +S LSACA +  +E G+ +H++ +K+G   +  V N L+ +YAKCG       
Sbjct: 552 VPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSH 611

Query: 487 ------------------------CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEA 522
                                    ++DA  VF+ M  RDV++WTA+I    Q G G+ A
Sbjct: 612 VFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVA 671

Query: 523 LQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMID 582
           L  +  MLARG KP+ +T   LL AC + G                 IK G + +  +I 
Sbjct: 672 LDLFLDMLARGIKPNQLTVTSLLSACGNLG----------------AIKLG-EQFHALIF 714

Query: 583 LLGRSGKLIEAKALLD--------------QMVGEPDATVWKALLSACRVHGDLELGERA 628
            LG    L    +L+               + + E D   W A+L  C  +G   LG+ A
Sbjct: 715 KLGFDTFLFVGNSLITMYFKCGYEDGFCVFEEMPEHDLITWNAVLVGCAQNG---LGKEA 771

Query: 629 ANNLFELEPMNAMP 642
                ++E    +P
Sbjct: 772 IKIFEQMEVEGILP 785



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 106/456 (23%), Positives = 202/456 (44%), Gaps = 61/456 (13%)

Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEA 320
           + +   + +V   +++I+ Y++ G +D AR L +     N  +W  ++ G+A++G  +EA
Sbjct: 193 VFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEA 252

Query: 321 LSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDM 380
             +F+ M  R++     ++ ++++ +  N DL NA+ +   + +     +    N+++  
Sbjct: 253 REVFESMTERNV----VSWNAMISGYVQNGDLKNARKLFDEMPEKNVASW----NSVVTG 304

Query: 381 YAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVV 440
           Y     +  A  +F+ M +++ +SW  +I+G  +   Y EA   F  M  +   PD  + 
Sbjct: 305 YCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIF 364

Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT 500
             +LSA   L  LE    +  + +K+G    + V ++++  Y + G ++ A   F++M  
Sbjct: 365 VVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPE 424

Query: 501 RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWY 560
           R+  +WT +I   AQ G+  +A+Q Y+    R  +    T   ++ A +  G  + AR  
Sbjct: 425 RNEYSWTTMIAAFAQCGRLDDAIQLYE----RVPEQTVATKTAMMTAYAQVGRIQKARLI 480

Query: 561 FESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL-------- 612
           F+ +     + P    +  +I    ++G L EAK L  +M  +  A+ W A+        
Sbjct: 481 FDEI-----LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSAS-WAAMIAGFVQNE 534

Query: 613 ---------------------------LSACRVHGDLELGERAANNLFELEPMNAMPYVQ 645
                                      LSAC   GD+E+G R  ++L          YV 
Sbjct: 535 ESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIG-RVIHSLAIKTGCQFNSYVM 593

Query: 646 --LSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSW 679
             L +MY+  G  ED + V      R IR +   SW
Sbjct: 594 NGLISMYAKCGNVEDGSHV-----FRTIRVKDTVSW 624


>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
 gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
          Length = 1122

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 316/774 (40%), Positives = 455/774 (58%), Gaps = 12/774 (1%)

Query: 39  LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF 98
           LN  L    +SG +  A  +F++M  ++ F+ N +++AY++SG L  A+ LF  +P +N 
Sbjct: 46  LNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNA 105

Query: 99  FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRL--CSLKGLLQRGEQFH 156
            TW+ ++  ++  G   +A  LF  M  EG  P + T+  VL L  C++  L       H
Sbjct: 106 TTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSL-------H 158

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
            +AIK   D + FV   L+D Y K   +  A  +F    D K+ V +  M+ G S+ G  
Sbjct: 159 PFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHD-KDAVTYNAMMMGCSKEGLH 217

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
            +A++ F  MR  G+ +  FTF SILT  A ++    G QVH  +L S    NV+V ++L
Sbjct: 218 TQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSL 277

Query: 277 IDMYAKCGDLDSARRLL-EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           +D Y+KC  LD  RRL  E  E DN VS+N +I  +A        L LF++M        
Sbjct: 278 LDFYSKCDCLDDMRRLFDEMPERDN-VSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQ 336

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
              Y ++L+   S  D++  K +H+ +V  G      + NALIDMY+K G LD A   F+
Sbjct: 337 VLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFS 396

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
              +K  ISWT+LITG   +G +EEAL+ FSDMR +G+ PD    SSI+ A + L ++  
Sbjct: 397 NRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGL 456

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
           G+Q+H+  ++SG  SS+   + LV +YAKCGC+++A R FD M  R+ I+W A+I   A 
Sbjct: 457 GRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAH 516

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
            G+ K A++ ++ ML  G  PD +TF+ +L ACSH GLA+    YF  M   Y I P  +
Sbjct: 517 YGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKE 576

Query: 576 HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
           HYAC+ID LGR G   + + +L +M  + D  +W ++L +CR+HG+ EL   AA+ LF +
Sbjct: 577 HYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGM 636

Query: 636 EPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG 695
           EP +A PYV LSN+Y+ AG+WEDAA V+K+M+ RG+RKE G SWVE   +++ F S D  
Sbjct: 637 EPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLT 696

Query: 696 HPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLP 755
            P+  +I  ++D +   + + GY PD+  ALH V+ E K   L YHSE+LA+AF L+  P
Sbjct: 697 SPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTP 756

Query: 756 QGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            G PIRI KNL  C DCH  +K IS +  R II+RDS RFHHFK G CSCGDYW
Sbjct: 757 AGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810


>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
          Length = 810

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 316/774 (40%), Positives = 455/774 (58%), Gaps = 12/774 (1%)

Query: 39  LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF 98
           LN  L    +SG +  A  +F++M  ++ F+ N +++AY++SG L  A+ LF  +P +N 
Sbjct: 46  LNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNA 105

Query: 99  FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRL--CSLKGLLQRGEQFH 156
            TW+ ++  ++  G   +A  LF  M  EG  P + T+  VL L  C++  L       H
Sbjct: 106 TTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSL-------H 158

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
            +AIK   D + FV   L+D Y K   +  A  +F    D K+ V +  M+ G S+ G  
Sbjct: 159 PFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHD-KDAVTYNAMMMGCSKEGLH 217

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
            +A++ F  MR  G+ +  FTF SILT  A ++    G QVH  +L S    NV+V ++L
Sbjct: 218 TQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSL 277

Query: 277 IDMYAKCGDLDSARRLL-EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           +D Y+KC  LD  RRL  E  E DN VS+N +I  +A        L LF++M        
Sbjct: 278 LDFYSKCDCLDDMRRLFDEMPERDN-VSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQ 336

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
              Y ++L+   S  D++  K +H+ +V  G      + NALIDMY+K G LD A   F+
Sbjct: 337 VLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFS 396

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
              +K  ISWT+LITG   +G +EEAL+ FSDMR +G+ PD    SSI+ A + L ++  
Sbjct: 397 NRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGL 456

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
           G+Q+H+  ++SG  SS+   + LV +YAKCGC+++A R FD M  R+ I+W A+I   A 
Sbjct: 457 GRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAH 516

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
            G+ K A++ ++ ML  G  PD +TF+ +L ACSH GLA+    YF  M   Y I P  +
Sbjct: 517 YGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKE 576

Query: 576 HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
           HYAC+ID LGR G   + + +L +M  + D  +W ++L +CR+HG+ EL   AA+ LF +
Sbjct: 577 HYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGM 636

Query: 636 EPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG 695
           EP +A PYV LSN+Y+ AG+WEDAA V+K+M+ RG+RKE G SWVE   +++ F S D  
Sbjct: 637 EPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLT 696

Query: 696 HPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLP 755
            P+  +I  ++D +   + + GY PD+  ALH V+ E K   L YHSE+LA+AF L+  P
Sbjct: 697 SPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTP 756

Query: 756 QGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            G PIRI KNL  C DCH  +K IS +  R II+RDS RFHHFK G CSCGDYW
Sbjct: 757 AGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 810


>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
          Length = 784

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 304/745 (40%), Positives = 448/745 (60%), Gaps = 2/745 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNET-PFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           D F  N ++A Y   G + +A+++F+E    +N  +W+ L+  Y       +A ++F +M
Sbjct: 41  DVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEM 100

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
              G +P+++    V+  C+    +  G Q H   ++  ++ + F    LVDMY K   +
Sbjct: 101 VWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRV 160

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
             A  +F+  PD  + V+W  +I+G   NG+  +AIE    M+  G+  N F   SIL A
Sbjct: 161 DIASVIFEKMPD-SDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKA 219

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           CA   A D G Q+HG ++ +  +++ Y+   L+DMYAK   LD A ++ ++    + + W
Sbjct: 220 CAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILW 279

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N++I G +  G H EA S+F  +    + ++  T  +VL   AS    +  + VH+L  K
Sbjct: 280 NALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEK 339

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            GF     V N LID Y K   L  A  VF      D+I+ TS+IT  +     E A+K 
Sbjct: 340 IGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKL 399

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           F +M   G+ PD  V+SS+L+ACA L+  E G+QVHA  +K    S     N+LV  YAK
Sbjct: 400 FMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAK 459

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG I DA   F S+  R V++W+A+I G AQ+G GK AL+ + +M+  G  P++IT   +
Sbjct: 460 CGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSV 519

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L AC+HAGL + A+ YF SM +++GI    +HY+CMIDLLGR+GKL +A  L++ M  + 
Sbjct: 520 LCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQA 579

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
           +A+VW ALL A RVH D ELG+ AA  LF LEP  +  +V L+N Y+++G W + A+VRK
Sbjct: 580 NASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRK 639

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
           LMK   I+KEP  SWVE   +VH FI  D+ HP+  +IYSK+DE+  L+ +AGY+P+++ 
Sbjct: 640 LMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDV 699

Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
            LH+++   KE+ L++HSE+LAVAF LL+ P GAPIR+ KNLR+C DCH A K+IS +  
Sbjct: 700 DLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVS 759

Query: 785 RHIILRDSNRFHHFKAGNCSCGDYW 809
           R II+RD NRFHHF+ G CSCGDYW
Sbjct: 760 REIIIRDINRFHHFRDGTCSCGDYW 784



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 134/449 (29%), Positives = 229/449 (51%), Gaps = 3/449 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           ++D FT N ++  Y   GR+  A  +F + P  +  +W++LI G    G D  A EL  Q
Sbjct: 141 EKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ 200

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+  G  P+ + L ++L+ C+  G    G Q HG+ IK   D + ++  GLVDMYAK   
Sbjct: 201 MKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHF 260

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A  +F      ++ + W  +I+G S  G   +A   F  +R EG+  N+ T  ++L 
Sbjct: 261 LDDAMKVFDWMSH-RDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLK 319

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           + A++ A     QVH      GF  + +V + LID Y KC  L  A R+ E     + ++
Sbjct: 320 STASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIA 379

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
             SMI   ++    + A+ LF +M  + ++ D F   S+LN  AS       K VH+ ++
Sbjct: 380 VTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI 439

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K  F    F  NAL+  YAK G+++ A + F+ + ++ V+SW+++I G A HG  + AL+
Sbjct: 440 KRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALE 499

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LVLVY 482
            F  M   GI P+H+ ++S+L AC    +++  ++      +  G        S ++ + 
Sbjct: 500 LFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLL 559

Query: 483 AKCGCINDANRVFDSMHTR-DVITWTALI 510
            + G ++DA  + +SM  + +   W AL+
Sbjct: 560 GRAGKLDDAMELVNSMPFQANASVWGALL 588



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 187/368 (50%), Gaps = 7/368 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G + +  +D D +    ++  YA +  L +A K+F+    ++   W++LI G S+ G   
Sbjct: 234 GFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHD 293

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EAF +F+ ++ EG   ++ TL  VL+  +         Q H  A K  F  +A VV GL+
Sbjct: 294 EAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLI 353

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           D Y KC C+ +A  +F+    G + +A T+MIT  SQ  +G  AI+ F +M  +G+E + 
Sbjct: 354 DSYWKCSCLSDAIRVFEECSSG-DIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDP 412

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
           F   S+L ACA++SA + G QVH  ++   F ++ +  +AL+  YAKCG ++ A   L +
Sbjct: 413 FVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAE--LAF 470

Query: 296 SEIDNE--VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDL 352
           S +     VSW++MI G A+ G  K AL LF +M    I  +  T  SVL  C  + +  
Sbjct: 471 SSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVD 530

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITG 411
              +  +S+    G +  +   + +ID+  + G LD A  + N M    +   W +L+  
Sbjct: 531 EAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGA 590

Query: 412 CAYHGSYE 419
              H   E
Sbjct: 591 SRVHKDPE 598


>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 309/745 (41%), Positives = 453/745 (60%), Gaps = 2/745 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPF-KNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           D F  N ++A Y   G + EA+ +F+E    +N  +W+ L+  Y        A ++F +M
Sbjct: 134 DIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEM 193

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
              G +P+++    V+  C+    L+ G + H   I+T +D + F    LVDMY+K   I
Sbjct: 194 VWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDI 253

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
             A  +F   P+  + V+W   I+G   +G+   A+E    M+  G+  N FT  SIL A
Sbjct: 254 RMAAVVFGKVPE-TDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKA 312

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           CA   A + G Q+HG ++ +  +++ Y+   L+DMYAK G LD A+++ ++    + V W
Sbjct: 313 CAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLW 372

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N++I G +    H EALSLF +M      ++  T  +VL   AS   +++ + VH+L  K
Sbjct: 373 NALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEK 432

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            GF     V N LID Y K   L+ A+ VF      D+I++TS+IT  +     E+A+K 
Sbjct: 433 LGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKL 492

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           F +M   G+ PD  V+SS+L+ACA L+  E G+QVHA  +K    S +   N+LV  YAK
Sbjct: 493 FMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAK 552

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG I DA+  F  +  + V++W+A+I G AQ+G GK AL  + +M+     P++IT   +
Sbjct: 553 CGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSV 612

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L AC+HAGL + A+ YF SM +++GI+   +HYACMIDLLGR+GKL +A  L++ M  + 
Sbjct: 613 LCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQT 672

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
           +A VW ALL+A RVH D ELG  AA  LF LEP  +  +V L+N Y++AG W+D A+VRK
Sbjct: 673 NAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRK 732

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
           LMK   ++KEP  SWVE   +VH FI  D+ HP   DIY+K+DE+  L+ +AGYVP++  
Sbjct: 733 LMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIYAKLDELGDLMTKAGYVPNVEV 792

Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
            LH+V++  KE+ L++HSE+LAVAF L++ P GAPIR+ KNLR+C DCH A K+IS +  
Sbjct: 793 DLHDVDKNEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHAAFKFISDIVS 852

Query: 785 RHIILRDSNRFHHFKAGNCSCGDYW 809
           R II+RD NRFHHF+ G CSC DYW
Sbjct: 853 REIIIRDINRFHHFRDGACSCRDYW 877



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 139/464 (29%), Positives = 239/464 (51%), Gaps = 8/464 (1%)

Query: 54  EAGQLFEKMS-----DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY 108
           EAG+    M      D+D FT N ++  Y+  G +R A  +F + P  +  +W++ I G 
Sbjct: 219 EAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGC 278

Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA 168
             +G D  A EL  QM+  G  P+ +TL ++L+ C+  G    G Q HG+ +K   D + 
Sbjct: 279 VLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDN 338

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
           ++  GLVDMYAK   + +A+ +F   P  ++ V W  +I+G S      +A+  F  MR 
Sbjct: 339 YIAFGLVDMYAKHGLLDDAKKVFDWIPQ-RDLVLWNALISGCSHGAQHAEALSLFCRMRK 397

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
           EG + N+ T  ++L + A++ A     QVH      GF ++ +V + LID Y KC  L+ 
Sbjct: 398 EGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNY 457

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
           A R+ E     + +++ SMI   ++    ++A+ LF +M  + +  D F   S+LN  AS
Sbjct: 458 AYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACAS 517

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
                  K VH+ ++K  F    F  NAL+  YAK G+++ A + F+ + +K V+SW+++
Sbjct: 518 LSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAM 577

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
           I G A HG  + AL  F  M    I P+H+ ++S+L AC    +++  ++      +  G
Sbjct: 578 IGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFG 637

Query: 469 CSSLSVDNS-LVLVYAKCGCINDANRVFDSMHTR-DVITWTALI 510
                   + ++ +  + G ++DA  + +SM  + +   W AL+
Sbjct: 638 IERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALL 681



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/387 (30%), Positives = 194/387 (50%), Gaps = 13/387 (3%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           T   +LT  AA  +   GA +H  +L SG  A    ++ L+  Y+KC    SARR+ +  
Sbjct: 6   TIGPLLTRYAATQSLLQGAHIHAHLLKSGLFA--VFRNHLLSFYSKCRLPGSARRVFDEI 63

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
                VSW+S++  ++     ++AL  F+ M +  ++ ++F  P VL C     D     
Sbjct: 64  PDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAP---DAGFGT 120

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYH 415
            +H+L + TG  G  FV NAL+ MY   G +D A MVF+    +++ +SW  L++    +
Sbjct: 121 QLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKN 180

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
                A+K F +M   G+ P+    S +++AC     LE G++VHA+ +++G    +   
Sbjct: 181 DRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTA 240

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           N+LV +Y+K G I  A  VF  +   DV++W A I GC  +G  + AL+   QM + G  
Sbjct: 241 NALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLV 300

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC--MIDLLGRSGKLIEA 593
           P+  T   +L AC+ +G     R     M K        D+Y    ++D+  + G L +A
Sbjct: 301 PNVFTLSSILKACAGSGAFNLGRQIHGFMVKA---NADSDNYIAFGLVDMYAKHGLLDDA 357

Query: 594 KALLDQMVGEPDATVWKALLSACRVHG 620
           K + D  + + D  +W AL+S C  HG
Sbjct: 358 KKVFD-WIPQRDLVLWNALISGCS-HG 382



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 186/368 (50%), Gaps = 7/368 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G + +  +D D +    ++  YA  G L +AKK+F+  P ++   W++LI G S+     
Sbjct: 327 GFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHA 386

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  LF +M+ EG+  ++ TL  VL+  +    +    Q H  A K  F  ++ VV GL+
Sbjct: 387 EALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLI 446

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNH--VAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
           D Y KC C+    Y +++F    ++  +A+T+MIT  SQ  +G  AI+ F +M  +G++ 
Sbjct: 447 DSYWKCDCL---NYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDP 503

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
           + F   S+L ACA++SA + G QVH  ++   F ++V+  +AL+  YAKCG ++ A    
Sbjct: 504 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAF 563

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDL 352
                   VSW++MI G A+ G  K AL +F +M    I  +  T  SVL  C  + +  
Sbjct: 564 SGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVD 623

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITG 411
              +  +S+    G E  +     +ID+  + G LD A  + N M    +   W +L+  
Sbjct: 624 EAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAA 683

Query: 412 CAYHGSYE 419
              H   E
Sbjct: 684 SRVHRDPE 691



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 111/259 (42%), Gaps = 34/259 (13%)

Query: 52  IDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNY 111
           ++ A ++FEK    D   + +MI A +                               ++
Sbjct: 455 LNYAYRVFEKHGSYDIIAFTSMITALSQ-----------------------------CDH 485

Query: 112 GLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV 171
           G D  A +LF +M  +G  P  + L ++L  C+     ++G+Q H + IK  F  + F  
Sbjct: 486 GED--AIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAG 543

Query: 172 TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV 231
             LV  YAKC  I +A+  F   P+ K  V+W+ MI G +Q+G+G +A++ F  M  E +
Sbjct: 544 NALVYTYAKCGSIEDADLAFSGLPE-KGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHI 602

Query: 232 ESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSAR 290
             N  T  S+L AC      D   +    +    G E      + +ID+  + G LD A 
Sbjct: 603 SPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAM 662

Query: 291 RLLEYSEID-NEVSWNSMI 308
            L+       N   W +++
Sbjct: 663 ELVNSMPFQTNAAVWGALL 681


>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 877

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 304/745 (40%), Positives = 448/745 (60%), Gaps = 2/745 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNET-PFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           D F  N ++A Y   G + +A+++F+E    +N  +W+ L+  Y       +A ++F +M
Sbjct: 134 DVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEM 193

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
              G +P+++    V+  C+    +  G Q H   ++  ++ + F    LVDMY K   +
Sbjct: 194 VWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRV 253

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
             A  +F+  PD  + V+W  +I+G   NG+  +AIE    M+  G+  N F   SIL A
Sbjct: 254 DIASVIFEKMPD-SDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKA 312

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           CA   A D G Q+HG ++ +  +++ Y+   L+DMYAK   LD A ++ ++    + + W
Sbjct: 313 CAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILW 372

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N++I G +  G H EA S+F  +    + ++  T  +VL   AS    +  + VH+L  K
Sbjct: 373 NALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEK 432

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            GF     V N LID Y K   L  A  VF      D+I+ TS+IT  +     E A+K 
Sbjct: 433 IGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKL 492

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           F +M   G+ PD  V+SS+L+ACA L+  E G+QVHA  +K    S     N+LV  YAK
Sbjct: 493 FMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAK 552

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG I DA   F S+  R V++W+A+I G AQ+G GK AL+ + +M+  G  P++IT   +
Sbjct: 553 CGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSV 612

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L AC+HAGL + A+ YF SM +++GI    +HY+CMIDLLGR+GKL +A  L++ M  + 
Sbjct: 613 LCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQA 672

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
           +A+VW ALL A RVH D ELG+ AA  LF LEP  +  +V L+N Y+++G W + A+VRK
Sbjct: 673 NASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRK 732

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
           LMK   I+KEP  SWVE   +VH FI  D+ HP+  +IYSK+DE+  L+ +AGY+P+++ 
Sbjct: 733 LMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDV 792

Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
            LH+++   KE+ L++HSE+LAVAF LL+ P GAPIR+ KNLR+C DCH A K+IS +  
Sbjct: 793 DLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVS 852

Query: 785 RHIILRDSNRFHHFKAGNCSCGDYW 809
           R II+RD NRFHHF+ G CSCGDYW
Sbjct: 853 REIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 134/449 (29%), Positives = 229/449 (51%), Gaps = 3/449 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           ++D FT N ++  Y   GR+  A  +F + P  +  +W++LI G    G D  A EL  Q
Sbjct: 234 EKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ 293

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+  G  P+ + L ++L+ C+  G    G Q HG+ IK   D + ++  GLVDMYAK   
Sbjct: 294 MKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHF 353

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A  +F      ++ + W  +I+G S  G   +A   F  +R EG+  N+ T  ++L 
Sbjct: 354 LDDAMKVFDWMSH-RDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLK 412

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           + A++ A     QVH      GF  + +V + LID Y KC  L  A R+ E     + ++
Sbjct: 413 STASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIA 472

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
             SMI   ++    + A+ LF +M  + ++ D F   S+LN  AS       K VH+ ++
Sbjct: 473 VTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI 532

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K  F    F  NAL+  YAK G+++ A + F+ + ++ V+SW+++I G A HG  + AL+
Sbjct: 533 KRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALE 592

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LVLVY 482
            F  M   GI P+H+ ++S+L AC    +++  ++      +  G        S ++ + 
Sbjct: 593 LFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLL 652

Query: 483 AKCGCINDANRVFDSMHTR-DVITWTALI 510
            + G ++DA  + +SM  + +   W AL+
Sbjct: 653 GRAGKLDDAMELVNSMPFQANASVWGALL 681



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/398 (31%), Positives = 195/398 (48%), Gaps = 19/398 (4%)

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           MR  G  S Q      LT  AA  A   GA +H  +L SGF A++  ++ LI  Y+KC  
Sbjct: 1   MRSAGTISQQ------LTRYAAAQALLPGAHLHANLLKSGFLASL--RNHLISFYSKCRR 52

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
              ARR+ +       VSW+S++  ++  G  + A+  F  M A  +  ++F  P VL C
Sbjct: 53  PCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC 112

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM-QDKDVIS 404
                D      VH++ + TGF    FV NAL+ MY   G +D A  VF+    +++ +S
Sbjct: 113 VP---DAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVS 169

Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
           W  L++    +    +A++ F +M  SGI P     S +++AC     ++ G+QVHA+ +
Sbjct: 170 WNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVV 229

Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ 524
           + G    +   N+LV +Y K G ++ A+ +F+ M   DV++W ALI GC  NG    A++
Sbjct: 230 RMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIE 289

Query: 525 FYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY--ACMID 582
              QM + G  P+      +L AC+ AG  +  R     M K        D Y    ++D
Sbjct: 290 LLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKA---NADSDDYIGVGLVD 346

Query: 583 LLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
           +  ++  L +A  + D M    D  +W AL+S C  HG
Sbjct: 347 MYAKNHFLDDAMKVFDWM-SHRDLILWNALISGCS-HG 382



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 187/368 (50%), Gaps = 7/368 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G + +  +D D +    ++  YA +  L +A K+F+    ++   W++LI G S+ G   
Sbjct: 327 GFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHD 386

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EAF +F+ ++ EG   ++ TL  VL+  +         Q H  A K  F  +A VV GL+
Sbjct: 387 EAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLI 446

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           D Y KC C+ +A  +F+    G + +A T+MIT  SQ  +G  AI+ F +M  +G+E + 
Sbjct: 447 DSYWKCSCLSDAIRVFEECSSG-DIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDP 505

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
           F   S+L ACA++SA + G QVH  ++   F ++ +  +AL+  YAKCG ++ A   L +
Sbjct: 506 FVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAE--LAF 563

Query: 296 SEIDNE--VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDL 352
           S +     VSW++MI G A+ G  K AL LF +M    I  +  T  SVL  C  + +  
Sbjct: 564 SSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVD 623

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITG 411
              +  +S+    G +  +   + +ID+  + G LD A  + N M    +   W +L+  
Sbjct: 624 EAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGA 683

Query: 412 CAYHGSYE 419
              H   E
Sbjct: 684 SRVHKDPE 691


>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  590 bits (1521), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 288/694 (41%), Positives = 432/694 (62%), Gaps = 1/694 (0%)

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  +   M L+G R        +L+ C+    L++G + H   +K+    N ++   L+
Sbjct: 79  EALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLL 138

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
            MYAKC  + +A  +F    D +N V+WT MI  +       +A +C+  M++ G + ++
Sbjct: 139 SMYAKCGSLTDARRVFDGIRD-RNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDK 197

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            TF S+L A         G +VH  I  +G E    V ++L+ MYAKCGD+  A+ + + 
Sbjct: 198 VTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDK 257

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               N V+W  +I G+A+QG    AL L +KM   ++  +  TY S+L    + + L + 
Sbjct: 258 LPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHG 317

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           K VH  I+++G+    +V NALI MY K G L  A  +F  +  +DV++WT+++TG A  
Sbjct: 318 KKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQL 377

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G ++EA+  F  M+  GI PD +  +S L++C+    L+ G+ +H   + +G    + + 
Sbjct: 378 GFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQ 437

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           ++LV +YAKCG ++DA  VF+ M  R+V+ WTA+I GCAQ+G+ +EAL++++QM  +G K
Sbjct: 438 SALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIK 497

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           PD +TF  +L AC+H GL E  R +F SM   YGIKP  +HY+C +DLLGR+G L EA+ 
Sbjct: 498 PDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAEN 557

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
           ++  M  +P  +VW ALLSACR+H D+E GERAA N+ +L+P +   YV LSN+Y+ AG+
Sbjct: 558 VILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGR 617

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
           +EDA +VR++M+ R + KEPG SW+E + +VH+F  ED+ HP   +IY+++ ++   IKE
Sbjct: 618 YEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQIKE 677

Query: 716 AGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
            GYVPD  F LH+V+EE K   L  HSE+LA+ +GL+  P G PIRI KNLRVCGDCHTA
Sbjct: 678 QGYVPDTRFVLHDVDEEQKVQTLCSHSERLAITYGLMKTPPGTPIRIVKNLRVCGDCHTA 737

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            K+IS V  R II RD++RFHHF  G CSCGD+W
Sbjct: 738 SKFISKVVGREIIARDAHRFHHFVDGVCSCGDFW 771



 Score =  293 bits (750), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 169/507 (33%), Positives = 274/507 (54%), Gaps = 7/507 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           NT+++ YA  G L +A+++F+    +N  +W+++I  +     ++EA++ +  M+L G +
Sbjct: 135 NTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCK 194

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P + T  ++L   +   LLQ G++ H    K   +L   V T LV MYAKC  I +A+ +
Sbjct: 195 PDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVI 254

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P+ KN V WT +I GY+Q G    A+E    M+   V  N+ T+ SIL  C    A
Sbjct: 255 FDKLPE-KNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLA 313

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            + G +VH  I+ SG+   ++V +ALI MY KCG L  AR+L       + V+W +M+ G
Sbjct: 314 LEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTG 373

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           +A+ GFH EA+ LF++M  + IK D  T+ S L   +S   L   KS+H  +V  G+   
Sbjct: 374 YAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLD 433

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
            ++ +AL+ MYAK G++D A +VFN M +++V++WT++ITGCA HG   EAL+YF  M+ 
Sbjct: 434 VYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKK 493

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQ-VHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
            GI PD V  +S+LSAC  + ++E G++   +++L  G    +   +  V +  + G + 
Sbjct: 494 QGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLE 553

Query: 490 DANRVFDSMHTRDVIT-WTALIMGCAQNGKGKEALQFYDQMLARGTKPD--YITFVGLLF 546
           +A  V  +M  +   + W AL+  C  +   +   +  + +L      D  Y+    +  
Sbjct: 554 EAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYA 613

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPG 573
           A      AE  R   E  D V   +PG
Sbjct: 614 AAGRYEDAEKVRQVMEKRDVVK--EPG 638



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/436 (30%), Positives = 227/436 (52%), Gaps = 11/436 (2%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
            +++  YA  G + +A+ +F++ P KN  TW+ LI GY+  G    A EL  +MQ     
Sbjct: 236 TSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVA 295

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P++ T  ++L+ C+    L+ G++ H Y I++ +    +VV  L+ MY KC  + EA  L
Sbjct: 296 PNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKL 355

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P  ++ V WT M+TGY+Q G+  +AI+ FR M+ +G++ ++ TF S LT+C++ + 
Sbjct: 356 FGDLPH-RDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAF 414

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              G  +H  ++ +G+  +VY+QSAL+ MYAKCG +D AR +       N V+W +MI G
Sbjct: 415 LQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITG 474

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEG 369
            A+ G  +EAL  F++M  + IK D  T+ SVL+ C    +     K   S+ +  G + 
Sbjct: 475 CAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKP 534

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEALKYFSDM 428
                +  +D+  + G+L+ A  V   M  +   S W +L++ C  H   E   +   + 
Sbjct: 535 MVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAEN- 593

Query: 429 RISGICPD----HVVVSSILSACAELTVLEFGQQVHAV--FLKSGGCSSLSVDNSLVLVY 482
            +  + PD    +V +S+I +A       E  +QV      +K  G S + VD  + + +
Sbjct: 594 -VLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFH 652

Query: 483 AKCGCINDANRVFDSM 498
            +     +A  ++  +
Sbjct: 653 VEDKSHPEAKEIYAEL 668



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 182/395 (46%), Gaps = 34/395 (8%)

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
             +QG  KEAL +   M  +  ++    +  +L   A    L   + VH+ I+K+G +  
Sbjct: 71  LCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPN 130

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
           +++ N L+ MYAK G+L  A  VF+ ++D++++SWT++I          EA K +  M++
Sbjct: 131 RYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKL 190

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
           +G  PD V   S+L+A     +L+ GQ+VH    K+G      V  SLV +YAKCG I+ 
Sbjct: 191 AGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISK 250

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           A  +FD +  ++V+TWT LI G AQ G+   AL+  ++M      P+ IT+  +L  C+ 
Sbjct: 251 AQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTT 310

Query: 551 AGLAENAR---------------WYFESM-------------DKVYGIKPGPD--HYACM 580
               E+ +               W   ++              K++G  P  D   +  M
Sbjct: 311 PLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAM 370

Query: 581 IDLLGRSGKLIEAKALLDQMVGE---PDATVWKALLSACRVHGDLELGERAANNLFELE- 636
           +    + G   EA  L  +M  +   PD   + + L++C     L+ G+     L     
Sbjct: 371 VTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGY 430

Query: 637 PMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
            ++      L +MY+  G  +DA  V   M  R +
Sbjct: 431 SLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNV 465



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 127/230 (55%), Gaps = 2/230 (0%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           R+ +  N +I  Y   G L+EA+KLF + P ++  TW++++ GY+  G   EA +LF +M
Sbjct: 331 REIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRM 390

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
           Q +G +P + T  + L  CS    LQ G+  H   +   + L+ ++ + LV MYAKC  +
Sbjct: 391 QQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSM 450

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            +A  +F    + +N VAWT MITG +Q+G   +A+E F  M+ +G++ ++ TF S+L+A
Sbjct: 451 DDARLVFNQMSE-RNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSA 509

Query: 245 CAAVSARDFGAQ-VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
           C  V   + G +      L  G +  V   S  +D+  + G L+ A  ++
Sbjct: 510 CTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVI 559



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 71/174 (40%), Gaps = 35/174 (20%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           L  ALV  ++  G +D+A  +F +MS+R+   W  MI   A  GR REA           
Sbjct: 436 LQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREA----------- 484

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                                E F QM+ +G +P + T  +VL  C+  GL++ G + H 
Sbjct: 485 --------------------LEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK-HF 523

Query: 158 YAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
            ++   + +   V   +  VD+  +   + EAE +    P       W  +++ 
Sbjct: 524 RSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSA 577


>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 919

 Score =  586 bits (1511), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 314/791 (39%), Positives = 452/791 (57%), Gaps = 8/791 (1%)

Query: 24  RYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGF-----TWNTMIAAYA 78
           R  H  G  V P   +  +++      E+ + G+L      + GF       N +I+ Y 
Sbjct: 132 REMHRSG--VVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYL 189

Query: 79  NSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDN 138
                R A ++F +  + +  T+++LI G++  G    A  +F +MQL G  P   T+ +
Sbjct: 190 RCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIAS 249

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           +L  CS  G L++G+Q H Y +K    L+  +   L+D+Y K   I EA  +F    D  
Sbjct: 250 LLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDS-GDRT 308

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           N V W  M+  Y Q     K+ + F  M   GV  N+FT+P +L  C        G Q+H
Sbjct: 309 NVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIH 368

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
              + +GF++++YV   LIDMY+K G LD A+R+L+  E  + VSW SMI G+ +  F K
Sbjct: 369 SLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCK 428

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           EAL  FK+M A  I  D+    S ++  A    ++    +H+ +  +G+     + N L+
Sbjct: 429 EALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLV 488

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
            +YA+ G    AF  F  ++ K+ I+W  LI+G A  G YEEALK F  M  +G   +  
Sbjct: 489 YLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVF 548

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
              S +SA A L  ++ G+Q+HA  +K+G  S   + N+L+ +Y KCG I DA   F  M
Sbjct: 549 TFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEM 608

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENAR 558
             R+ ++W  +I  C+Q+G+G EAL  +DQM  +G KP  +TFVG+L ACSH GL E   
Sbjct: 609 TKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGL 668

Query: 559 WYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRV 618
            YF+SM   +GI P PDHYAC++D+LGR+G+L  AK  +++M    D+ VW+ LLSAC+V
Sbjct: 669 CYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKV 728

Query: 619 HGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCS 678
           H +LE+GE AA +L ELEP ++  YV LSN Y+  GKW    ++RK+MK RG+RKEPG S
Sbjct: 729 HKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRS 788

Query: 679 WVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGL 738
           W+E  + VH F   DR HPL   IY+ +  +   + + GY  +     H  E+EGK+   
Sbjct: 789 WIEVKNVVHAFFVGDRLHPLADQIYNFLSHLNDRLYKIGYKQENYHLFHEKEKEGKDPTA 848

Query: 739 AYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHF 798
             HSEKLAVAFGL++LP   P+R+ KNLRVC DCHT MK+ S V  R I+LRD  RFHHF
Sbjct: 849 FVHSEKLAVAFGLMSLPSCMPLRVIKNLRVCNDCHTWMKFTSGVMGREIVLRDVYRFHHF 908

Query: 799 KAGNCSCGDYW 809
             G+CSCGDYW
Sbjct: 909 NNGSCSCGDYW 919



 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 171/552 (30%), Positives = 301/552 (54%), Gaps = 7/552 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +I  YA  G +R A+++F E   ++  +W +++ GY+  GL  EA  L+ +M   G  
Sbjct: 81  NLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVV 140

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+ Y L ++L  C+   L Q G   H    K  F    FV   L+ +Y +C+    A+ +
Sbjct: 141 PTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRV 200

Query: 191 F--KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
           F   ++ D    V + T+I+G++Q G+G +A+  F +M++ G+  +  T  S+L AC+AV
Sbjct: 201 FCDMLYCDS---VTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAV 257

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
                G Q+H  +L +G   +  ++ +L+D+Y K GD++ A ++ +  +  N V WN M+
Sbjct: 258 GDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLML 317

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
           V + +     ++  +F +M A  ++ + FTYP +L       ++   + +HSL +K GF+
Sbjct: 318 VAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQ 377

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
              +V+  LIDMY+K G LD A  + +++++KDV+SWTS+I G   H   +EAL+ F +M
Sbjct: 378 SDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEM 437

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
           +  GI PD++ ++S +SACA +  +  G Q+HA    SG  + +S+ N LV +YA+CG  
Sbjct: 438 QACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGIS 497

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
            +A   F+++  ++ ITW  LI G AQ+G  +EAL+ + +M   G K +  TFV  + A 
Sbjct: 498 KEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISAS 557

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           ++    +  +     + K  G     +    +I L G+ G + +AK    +M    + + 
Sbjct: 558 ANLADIKQGKQIHARVIKT-GYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVS- 615

Query: 609 WKALLSACRVHG 620
           W  +++ C  HG
Sbjct: 616 WNTIITCCSQHG 627



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 202/409 (49%), Gaps = 12/409 (2%)

Query: 238 FPSILTACAAVSAR-DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           F   L AC     R     ++H   +  G      + + LID+YAK G +  ARR+ E  
Sbjct: 44  FACALRACRGSGRRWPLVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEEL 103

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
            + + VSW +++ G+A+ G  +EA+ L+++MH   +    +   S+L+           +
Sbjct: 104 SVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGR 163

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H  + K GF    FV NALI +Y +  +   A  VF  M   D +++ +LI+G A  G
Sbjct: 164 LIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCG 223

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
             + AL  F +M++SG+ PD V ++S+L+AC+ +  L  G+Q+H+  LK+G      ++ 
Sbjct: 224 HGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEG 283

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           SL+ +Y K G I +A ++FDS    +V+ W  +++   Q     ++   + +MLA G +P
Sbjct: 284 SLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRP 343

Query: 537 DYITFVGLLFACSHA---GLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
           +  T+  +L  C+H    GL E       S+    G +        +ID+  + G L +A
Sbjct: 344 NKFTYPCMLRTCTHTGEIGLGEQ----IHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKA 399

Query: 594 KALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           + +LD M+ E D   W ++++    H   E  + A     E++     P
Sbjct: 400 QRILD-MIEEKDVVSWTSMIAGYVQH---EFCKEALETFKEMQACGIWP 444


>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 908

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 308/741 (41%), Positives = 441/741 (59%), Gaps = 4/741 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++  YA SG + +A+ +F+    ++ F+W+ +I G + +G   EAF LF QM+  G  
Sbjct: 170 NALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCL 229

Query: 131 PSQYTLDNVLRLCSLK--GLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
           P+  T  ++L   ++   G L+  ++ H +A K  F  +  V   L+ MYAKC  I +A 
Sbjct: 230 PNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDAR 289

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
            +F    D ++ ++W  MI G +QNG G +A   F  M+ EG   +  T+ S+L    + 
Sbjct: 290 LVFDGMCD-RDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVST 348

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
            A ++  +VH   +  G  +++ V SA + MY +CG +D A+ + +   + N  +WN+MI
Sbjct: 349 GAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMI 408

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
            G A+Q   +EALSLF +M       D  T+ ++L+       L   K VHS  +  G  
Sbjct: 409 GGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLV 468

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
             + V NAL+ MYAK GN   A  VF+ M +++V +WT +I+G A HG   EA   F  M
Sbjct: 469 DLR-VGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQM 527

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
              GI PD     SILSACA    LE+ ++VH+  + +G  S L V N+LV +YAKCG +
Sbjct: 528 LREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSV 587

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
           +DA RVFD M  RDV +WT +I G AQ+G+G +AL  + +M   G KP+  +FV +L AC
Sbjct: 588 DDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSAC 647

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           SHAGL +  R  F S+ + YGI+P  +HY CM+DLLGR+G+L EAK  +  M  EP    
Sbjct: 648 SHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAP 707

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           W ALL AC  +G+LE+ E AA    +L+P +A  YV LSN+Y+  G WE    VR +M+ 
Sbjct: 708 WGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQR 767

Query: 669 RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHN 728
           RGIRKEPG SW+E ++Q+H F+  D  HP   +IY+K+ +++  +K  GYVPD    L N
Sbjct: 768 RGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLKAEGYVPDTRLVLRN 827

Query: 729 VEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHII 788
            ++E KE  L  HSEKLA+ +GL+  P   PIR++KNLRVC DCHTA K+IS V  R I+
Sbjct: 828 TDQEYKEQALCSHSEKLAIVYGLMHTPYRNPIRVYKNLRVCSDCHTATKFISKVTGREIV 887

Query: 789 LRDSNRFHHFKAGNCSCGDYW 809
            RD+ RFHHFK G CSCGDYW
Sbjct: 888 ARDAKRFHHFKDGVCSCGDYW 908



 Score =  288 bits (738), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 185/554 (33%), Positives = 281/554 (50%), Gaps = 10/554 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
             ++  Y   G + +A+ +F++   +N  +W+ +I G ++YG   EAF  F QMQ EG+ 
Sbjct: 69  TALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFI 128

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+ YT  ++L   +  G L+  ++ H +A+     L+  V   LV MYAK   I +A  +
Sbjct: 129 PNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVV 188

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS- 249
           F    + ++  +WT MI G +Q+G G +A   F  M   G   N  T+ SIL A A  S 
Sbjct: 189 FDGMVE-RDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITST 247

Query: 250 -ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
            A ++  +VH     +GF +++ V +ALI MYAKCG +D AR + +     + +SWN+MI
Sbjct: 248 GALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMI 307

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
            G A+ G   EA ++F KM       D  TY S+LN   S       K VH   V+ G  
Sbjct: 308 GGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLV 367

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
               V +A + MY + G++D A ++F+ +  ++V +W ++I G A      EAL  F  M
Sbjct: 368 SDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQM 427

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
           R  G  PD     +ILSA      LE+ ++VH+  + + G   L V N+LV +YAKCG  
Sbjct: 428 RREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDA-GLVDLRVGNALVHMYAKCGNT 486

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
             A +VFD M  R+V TWT +I G AQ+G G EA   + QML  G  PD  T+V +L AC
Sbjct: 487 MYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSAC 546

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYA--CMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           +  G  E   W  E            D      ++ +  + G + +A+ + D M+ E D 
Sbjct: 547 ASTGALE---WVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDML-ERDV 602

Query: 607 TVWKALLSACRVHG 620
             W  ++     HG
Sbjct: 603 YSWTVMIGGLAQHG 616



 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 207/608 (34%), Positives = 308/608 (50%), Gaps = 46/608 (7%)

Query: 104 LIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC 163
           +I GY+ YG   +A +++ QM+ EG +P++ T  ++L+ C     L+ G++ H + I++ 
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
           F  +  V T LV+MY KC  I +A+ +F    + +N ++WT MI G +  G G +A   F
Sbjct: 61  FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVE-RNVISWTVMIGGLAHYGRGQEAFHRF 119

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
             M+ EG   N +T+ SIL A A+  A ++  +VH   +++G   ++ V +AL+ MYAK 
Sbjct: 120 LQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKS 179

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
           G +D AR + +     +  SW  MI G A+ G  +EA SLF +M       +  TY S+L
Sbjct: 180 GSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSIL 239

Query: 344 NCFA--SNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
           N  A  S   L   K VH    K GF     V NALI MYAK G++D A +VF+ M D+D
Sbjct: 240 NASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRD 299

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
           VISW ++I G A +G   EA   F  M+  G  PD     S+L+        E+ ++VH 
Sbjct: 300 VISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHK 359

Query: 462 VFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKE 521
             ++ G  S L V ++ V +Y +CG I+DA  +FD +  R+V TW A+I G AQ   G+E
Sbjct: 360 HAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGRE 419

Query: 522 ALQFYDQMLARGTKPDYITFVGLLFA----------------CSHAGLAE----NA--RW 559
           AL  + QM   G  PD  TFV +L A                   AGL +    NA    
Sbjct: 420 ALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVGNALVHM 479

Query: 560 YFESMDKVYG-------IKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE---PDATVW 609
           Y +  + +Y        ++     +  MI  L + G   EA +L  QM+ E   PDAT +
Sbjct: 480 YAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTY 539

Query: 610 KALLSACRVHGDLELGERA------ANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
            ++LSAC   G LE  +        A  + +L   NA     L +MY+  G  +DA RV 
Sbjct: 540 VSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNA-----LVHMYAKCGSVDDARRVF 594

Query: 664 KLMKSRGI 671
             M  R +
Sbjct: 595 DDMLERDV 602



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 151/517 (29%), Positives = 234/517 (45%), Gaps = 38/517 (7%)

Query: 6   FKILNFSLRCRSKIIGPARYTHNVGNSVKPASDL---NRALVDFSNSGEIDEAGQLFEKM 62
             ILN S    +  +   +  H         SDL   N  +  ++  G ID+A  +F+ M
Sbjct: 236 LSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGM 295

Query: 63  SDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFW 122
            DRD  +WN MI                                G +  G   EAF +F 
Sbjct: 296 CDRDVISWNAMIG-------------------------------GLAQNGCGHEAFTIFL 324

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           +MQ EG+ P   T  ++L      G  +  ++ H +A++     +  V +  V MY +C 
Sbjct: 325 KMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCG 384

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            I +A+ +F      +N   W  MI G +Q   G +A+  F  MR EG   +  TF +IL
Sbjct: 385 SIDDAQLIFDKLAV-RNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNIL 443

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           +A     A ++  +VH   + +G   ++ V +AL+ MYAKCG+   A+++ +     N  
Sbjct: 444 SANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVT 502

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           +W  MI G A+ G   EA SLF +M    I  D  TY S+L+  AS   L   K VHS  
Sbjct: 503 TWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHA 562

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           V  G      V NAL+ MYAK G++D A  VF+ M ++DV SWT +I G A HG   +AL
Sbjct: 563 VNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDAL 622

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLV 481
             F  M++ G  P+     ++LSAC+   +++ G++      +  G   ++     +V +
Sbjct: 623 DLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDL 682

Query: 482 YAKCGCINDANRVFDSMHTRDV-ITWTALIMGCAQNG 517
             + G + +A     +M        W AL+  C   G
Sbjct: 683 LGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYG 719


>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 723

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 288/695 (41%), Positives = 433/695 (62%), Gaps = 2/695 (0%)

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  +   M L+G R        +L+ C+    L++G + H   +K+    N ++   L+
Sbjct: 30  EALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLL 89

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
            MYAKC  + +A  +F    D +N V+WT MI  +       +A +C+  M++ G + ++
Sbjct: 90  SMYAKCGSLTDARRVFDSIRD-RNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDK 148

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            TF S+L A         G +VH  I+ +G E    V ++L+ MYAKCGD+  AR + + 
Sbjct: 149 VTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDR 208

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               N V+W  +I G+A+QG    AL L + M   ++  +  T+ S+L    +   L + 
Sbjct: 209 LPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHG 268

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           K VH  I+++G+    +V N+LI MY K G L+ A  +F+ +  +DV++WT+++TG A  
Sbjct: 269 KKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQL 328

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G ++EA+  F  M+  GI PD +  +S+L++C+    L+ G+++H   + +G    + + 
Sbjct: 329 GFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQ 388

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC-AQNGKGKEALQFYDQMLARGT 534
           ++LV +YAKCG ++DA+ VF+ M  R+V+ WTA+I GC AQ+G+ +EAL+++DQM  +G 
Sbjct: 389 SALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGI 448

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAK 594
           KPD +TF  +L AC+H GL E  R +F SM   YGIKP  +HY+C +DLLGR+G L EA+
Sbjct: 449 KPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAE 508

Query: 595 ALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAG 654
            ++  M   P  +VW ALLSACRVH D+E GERAA N+ +L+P +   YV LS++Y+ AG
Sbjct: 509 NVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAG 568

Query: 655 KWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIK 714
           ++EDA +VR++M+ R + KEPG SW+E + +VH+F  ED+ HP    IY ++ ++   IK
Sbjct: 569 RYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIK 628

Query: 715 EAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHT 774
           E GYVPD  F LH+V+EE KE  L  HSE+LA+ +GL+  P G PIRI KNLRVCGDCHT
Sbjct: 629 EMGYVPDTRFVLHDVDEEQKERILFSHSERLAITYGLMKTPPGMPIRIVKNLRVCGDCHT 688

Query: 775 AMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           A K+IS V  R II RD+ RFHHF  G CSCGD+W
Sbjct: 689 ATKFISKVVGREIIARDAQRFHHFADGVCSCGDFW 723



 Score =  293 bits (750), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 170/508 (33%), Positives = 275/508 (54%), Gaps = 8/508 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           NT+++ YA  G L +A+++F+    +N  +W+++I  +     ++EAF+ +  M+L G +
Sbjct: 86  NTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCK 145

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P + T  ++L   +   LLQ G++ H   ++   +L   V T LV MYAKC  I +A  +
Sbjct: 146 PDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVI 205

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P+ KN V WT +I GY+Q G    A+E    M+   V  N+ TF SIL  C   +A
Sbjct: 206 FDRLPE-KNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAA 264

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            + G +VH  I+ SG+   ++V ++LI MY KCG L+ AR+L       + V+W +M+ G
Sbjct: 265 LEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTG 324

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           +A+ GFH EA++LF++M  + IK D  T+ SVL   +S   L   K +H  +V  G+   
Sbjct: 325 YAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLD 384

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG-CAYHGSYEEALKYFSDMR 429
            ++ +AL+ MYAK G++D A +VFN M +++V++WT++ITG CA HG   EAL+YF  M+
Sbjct: 385 VYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMK 444

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQ-VHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
             GI PD V  +S+LSAC  + ++E G++   +++L  G    +   +  V +  + G +
Sbjct: 445 KQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHL 504

Query: 489 NDANRVFDSMH-TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD--YITFVGLL 545
            +A  V  SM        W AL+  C  +   +   +  + +L      D  Y+    + 
Sbjct: 505 EEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIY 564

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPG 573
            A      AE  R   E  D V   +PG
Sbjct: 565 AAAGRYEDAEKVRQVMEKRDVVK--EPG 590



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/437 (31%), Positives = 223/437 (51%), Gaps = 18/437 (4%)

Query: 51  EIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSN 110
           EI EAG   E    R G    +++  YA  G + +A+ +F+  P KN  TW+ LI GY+ 
Sbjct: 173 EIVEAGLELEP---RVG---TSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQ 226

Query: 111 YGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV 170
            G    A EL   MQ     P++ T  ++L+ C+    L+ G++ H Y I++ +    +V
Sbjct: 227 QGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWV 286

Query: 171 VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG 230
           V  L+ MY KC  + EA  LF   P  ++ V WT M+TGY+Q G+  +AI  FR M+ +G
Sbjct: 287 VNSLITMYCKCGGLEEARKLFSDLPH-RDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQG 345

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           ++ ++ TF S+LT+C++ +    G ++H  ++ +G+  +VY+QSAL+ MYAKCG +D A 
Sbjct: 346 IKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDAS 405

Query: 291 RLLEYSEIDNEVSWNSMIVG-FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFAS 348
            +       N V+W ++I G  A+ G  +EAL  F +M  + IK D  T+ SVL+ C   
Sbjct: 406 LVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHV 465

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTS 407
            +     K   S+ +  G +      +  +D+  + G+L+ A  V   M      S W +
Sbjct: 466 GLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGA 525

Query: 408 LITGCAYHGSYEEALKYFSDMRISGICPD----HVVVSSILSACAELTVLEFGQQVHAV- 462
           L++ C  H   E   +   +  +  + PD    +V +SSI +A       E  +QV    
Sbjct: 526 LLSACRVHSDVERGERAAEN--VLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKR 583

Query: 463 -FLKSGGCSSLSVDNSL 478
             +K  G S + VD  +
Sbjct: 584 DVVKEPGQSWIEVDGKV 600



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 187/396 (47%), Gaps = 36/396 (9%)

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
             + G  KEAL +   M  +  ++    +  +L   A    L   + VH+ I+K+G +  
Sbjct: 22  LCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPN 81

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
           +++ N L+ MYAK G+L  A  VF+ ++D++++SWT++I          EA K +  M++
Sbjct: 82  RYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKL 141

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
           +G  PD V   S+L+A     +L+ GQ+VH   +++G      V  SLV +YAKCG I+ 
Sbjct: 142 AGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISK 201

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           A  +FD +  ++V+TWT LI G AQ G+   AL+  + M      P+ ITF  +L  C+ 
Sbjct: 202 ARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTT 261

Query: 551 AGLAENAR---------------WYFESMDKVY----GIK---------PGPD--HYACM 580
               E+ +               W   S+  +Y    G++         P  D   +  M
Sbjct: 262 PAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAM 321

Query: 581 IDLLGRSGKLIEAKALLDQMVGE---PDATVWKALLSACRVHGDLELGERAANNLFELEP 637
           +    + G   EA  L  +M  +   PD   + ++L++C     L+ G+R    L     
Sbjct: 322 VTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVH-AG 380

Query: 638 MNAMPYVQ--LSNMYSTAGKWEDAARVRKLMKSRGI 671
            N   Y+Q  L +MY+  G  +DA+ V   M  R +
Sbjct: 381 YNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNV 416



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 127/273 (46%), Gaps = 35/273 (12%)

Query: 39  LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF 98
           +N  +  +   G ++EA +LF  +  RD  TW  M+                        
Sbjct: 287 VNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVT----------------------- 323

Query: 99  FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
                   GY+  G   EA  LF +MQ +G +P + T  +VL  CS    LQ G++ H  
Sbjct: 324 --------GYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQ 375

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG-YSQNGYGF 217
            +   ++L+ ++ + LV MYAKC  + +A  +F    + +N VAWT +ITG  +Q+G   
Sbjct: 376 LVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSE-RNVVAWTAIITGCCAQHGRCR 434

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ-VHGCILSSGFEANVYVQSAL 276
           +A+E F  M+ +G++ ++ TF S+L+AC  V   + G +      L  G +  V   S  
Sbjct: 435 EALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCF 494

Query: 277 IDMYAKCGDLDSARR-LLEYSEIDNEVSWNSMI 308
           +D+  + G L+ A   +L    I     W +++
Sbjct: 495 VDLLGRAGHLEEAENVILSMPFIPGPSVWGALL 527


>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  584 bits (1505), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 292/780 (37%), Positives = 467/780 (59%), Gaps = 37/780 (4%)

Query: 66   DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
            D F  N +I  YA         K+F+E   +N  TW+S+I   + +G   +A  LF +MQ
Sbjct: 310  DTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQ 369

Query: 126  LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
              GY+ +++ L ++L   +    + +G + HG+ ++   + +  + + LVDMY+KC  + 
Sbjct: 370  ESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVE 429

Query: 186  EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE-GVESNQFTFPSILTA 244
            EA  +F+   + +N V++  ++ GY Q G   +A+E + DM+ E G++ +QFTF ++LT 
Sbjct: 430  EAHQVFRSLLE-RNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTL 488

Query: 245  CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
            CA     + G Q+H  ++ +    N+ V++ L+ MY++CG L+ A+ +       N  SW
Sbjct: 489  CANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSW 548

Query: 305  NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
            NSMI G+ + G  +EAL LFK+M    IK D F+  S+L+   S  D    + +H+ IV+
Sbjct: 549  NSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVR 608

Query: 365  TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-------------------- 404
               E    +   L+DMYAK G++D A+ V++    KDVI                     
Sbjct: 609  NTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNL 668

Query: 405  -----------WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
                       W S++ G A  G  +E+  +F +M  S I  D + + +I++ C+ L  L
Sbjct: 669  FDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPAL 728

Query: 454  EFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMG 512
            E G Q+H++ +K G  + S+ ++ +LV +Y+KCG I  A  VFD+M+ +++++W A+I G
Sbjct: 729  EHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISG 788

Query: 513  CAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKP 572
             +++G  KEAL  Y++M  +G  P+ +TF+ +L ACSH GL E     F SM + Y I+ 
Sbjct: 789  YSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEA 848

Query: 573  GPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNL 632
              +HY CM+DLLGR+G+L +AK  +++M  EP+ + W ALL ACRVH D+++G  AA  L
Sbjct: 849  KAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRL 908

Query: 633  FELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISE 692
            FEL+P N  PYV +SN+Y+ AG+W++   +R++MK +G++K+PG SW+E NS++ IF + 
Sbjct: 909  FELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAG 968

Query: 693  DRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAY---HSEKLAVAF 749
             + HP   +IY+ +  + L  K  GY+PD +F L NV++  +E    Y   HSE+LA++ 
Sbjct: 969  SKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSL 1028

Query: 750  GLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            GL++LP+ + IR+FKNLR+CGDCHTA K+IS +  R II RD+NRFHHF+ G CSCGDYW
Sbjct: 1029 GLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 1088



 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 191/685 (27%), Positives = 324/685 (47%), Gaps = 52/685 (7%)

Query: 33  VKPASDLN-----RALVDFSNSGEIDEAGQLFEKM----SDRDGFTWNTMIAAYANSGRL 83
            KPASD+N       + D  +S        +  +M     + D +    ++  YA SG L
Sbjct: 63  TKPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCL 122

Query: 84  RE---AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVL 140
            +   A+KLF E P +N   W+++I  Y+     +E   L+ +M+  G    ++T  +V+
Sbjct: 123 DDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVI 182

Query: 141 RLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNH 200
           + C     +    Q     +K   + N FV   LVD YA+   + +A        +G + 
Sbjct: 183 KACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEI-EGTSV 241

Query: 201 VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
           V W  +I GY +     +A   F  M   GV  + FTF S L  C A+ +RD G QVH  
Sbjct: 242 VTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSK 301

Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEA 320
           +++ GF+ + +V +ALIDMYAKC D +S  ++ +     N+V+WNS+I   A+ G   +A
Sbjct: 302 LIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDA 361

Query: 321 LSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDM 380
           L LF +M     K + F   S+L   A   D+   + +H  +V+        + +AL+DM
Sbjct: 362 LVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDM 421

Query: 381 YAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS-GICPDHVV 439
           Y+K G ++ A  VF  + +++ +S+ +L+ G    G  EEAL+ + DM+   GI PD   
Sbjct: 422 YSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFT 481

Query: 440 VSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH 499
            +++L+ CA       G+Q+HA  +++    ++ V+  LV +Y++CG +N A  +F+ M 
Sbjct: 482 FTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMA 541

Query: 500 TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW 559
            R+  +W ++I G  QNG+ +EAL+ + QM   G KPD  +   +L +C     ++  R 
Sbjct: 542 ERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRE 601

Query: 560 YFE-------------------------SMD---KVYG--IKPGPDHYACMIDLLGRSGK 589
                                       SMD   KVY   IK        M+     SG+
Sbjct: 602 LHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGR 661

Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELE----PMNAMPYVQ 645
             +AK L DQM  + +  +W ++L+     G   L + + N+  E+       + +  V 
Sbjct: 662 ANDAKNLFDQM-EQRNTALWNSILAGYANKG---LKKESFNHFLEMLESDIEYDVLTMVT 717

Query: 646 LSNMYSTAGKWEDAARVRKLMKSRG 670
           + N+ S+    E   ++  L+  +G
Sbjct: 718 IVNLCSSLPALEHGDQLHSLIIKKG 742



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 158/557 (28%), Positives = 272/557 (48%), Gaps = 44/557 (7%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G L   + + D    + ++  Y+  G + EA ++F     +N  ++++L+ GY   G   
Sbjct: 401 GHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAE 460

Query: 116 EAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
           EA EL+  MQ E G +P Q+T   +L LC+ +    +G Q H + I+     N  V T L
Sbjct: 461 EALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETEL 520

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           V MY++C  +  A+ +F    + +N  +W +MI GY QNG   +A+  F+ M++ G++ +
Sbjct: 521 VHMYSECGRLNYAKEIFNRMAE-RNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPD 579

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLD------- 287
            F+  S+L++C ++S    G ++H  I+ +  E    +Q  L+DMYAKCG +D       
Sbjct: 580 CFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYD 639

Query: 288 ------------------------SARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSL 323
                                    A+ L +  E  N   WNS++ G+A +G  KE+ + 
Sbjct: 640 QTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNH 699

Query: 324 FKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV-NNALIDMYA 382
           F +M   DI+ D  T  +++N  +S   L +   +HSLI+K GF     V   AL+DMY+
Sbjct: 700 FLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYS 759

Query: 383 KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
           K G +  A  VF+ M  K+++SW ++I+G + HG  +EAL  + +M   G+ P+ V   +
Sbjct: 760 KCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLA 819

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LVLVYAKCGCINDANRVFDSMHTR 501
           ILSAC+   ++E G ++     +     + +   + +V +  + G + DA    + M   
Sbjct: 820 ILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIE 879

Query: 502 -DVITWTALIMGCAQNGK---GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENA 557
            +V TW AL+  C  +     G+ A Q   ++  +   P Y+    +  A       E+ 
Sbjct: 880 PEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGP-YVIMSNIYAAAGRWKEVEDI 938

Query: 558 RWYFESMDKVYGIKPGP 574
           R     M K+ G+K  P
Sbjct: 939 R----QMMKMKGVKKDP 951


>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  583 bits (1503), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 307/813 (37%), Positives = 465/813 (57%), Gaps = 46/813 (5%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN--------- 91
           ALV+ ++    I EA  LF++M  RD   WN M+ AY   G   E   LF+         
Sbjct: 162 ALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRP 221

Query: 92  --------------ETPFK--------------------NFFTWSSLIYGYSNYGLDIEA 117
                         +T F+                    +   W+  +  Y   G   EA
Sbjct: 222 DCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEA 281

Query: 118 FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
            + F  M          T   +L + +    L+ G+Q HG  ++  +D    V    ++M
Sbjct: 282 VDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINM 341

Query: 178 YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
           Y K   +  A  +F    +  + ++W T+I+G +++G    ++  F D+   G+  +QFT
Sbjct: 342 YVKAGSVNYARRMFGQMKE-VDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFT 400

Query: 238 FPSILTACAAVS-ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
             S+L AC+++  +   G QVH C L +G   + +V +ALID+Y+K G ++ A  L    
Sbjct: 401 ITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQ 460

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
           +  +  SWN+M+ GF     ++EAL LF  MH R  K D  T+ +        + L   K
Sbjct: 461 DGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGK 520

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H++++K  F    FV + ++DMY K G +  A  VFN +   D ++WT++I+GC  +G
Sbjct: 521 QIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENG 580

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
             E+AL  +  MR++G+ PD    ++++ AC+ LT LE G+Q+HA  +K        V  
Sbjct: 581 EEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMT 640

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           SLV +YAKCG I DA  +F  M+TR V  W A+I+G AQ+G  +EAL F+++M +RG  P
Sbjct: 641 SLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTP 700

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           D +TF+G+L ACSH+GL  +A   F+SM K YG++P  +HY+C++D L R+G + EA+ +
Sbjct: 701 DRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKV 760

Query: 597 LDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
           +  M  E  AT+++ LL+ACRV GD E GER A  LF ++P ++  YV LSN+Y+ A +W
Sbjct: 761 VSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQW 820

Query: 657 EDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA 716
           E+A   R +MK   ++KEPG SW++  ++VH+F++ DR H     IY+K++ +M  IKE 
Sbjct: 821 ENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEE 880

Query: 717 GYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAM 776
           GYVPD  FAL ++EEE KE  L+YHSEKLA+A+GL+  P    +R+ KNLRVCGDCH A+
Sbjct: 881 GYVPDTEFALVDIEEEDKESALSYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAI 940

Query: 777 KYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           KYIS V+ R I+LRD+NRFHHF++G CSCGDYW
Sbjct: 941 KYISNVFQREIVLRDANRFHHFRSGICSCGDYW 973



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 186/706 (26%), Positives = 311/706 (44%), Gaps = 95/706 (13%)

Query: 6   FKILNFSLRCRSKIIGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFE--KM 62
           F IL  ++     I+G   +   V + + P   +   L+  ++  G +  A +LF+    
Sbjct: 17  FSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQ 76

Query: 63  SDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFW 122
           SDRD  T+N ++AAYA++G L + +K                           EAF +F 
Sbjct: 77  SDRDLVTYNAILAAYAHTGELHDVEKTH-------------------------EAFHIFR 111

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
            ++      +++TL  + +LC L G     E   GYA+K     + FV   LV++YAK +
Sbjct: 112 LLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQ 171

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            I EA  LF   P  ++ V W  M+  Y + G G + +  F      G+  +  +  +IL
Sbjct: 172 RIREARVLFDRMP-VRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL 230

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
                           G    + FE  +    A       C D             D++V
Sbjct: 231 M---------------GVGKKTVFERELEQVRAYATKLFVCDD-------------DSDV 262

Query: 303 S-WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           + WN  +  + + G   EA+  F+ M    +  D  TY  +L+  AS   L   K +H  
Sbjct: 263 TVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGA 322

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           +V+ G++ +  V N+ I+MY K G+++ A  +F  M++ D+ISW ++I+GCA  G  E +
Sbjct: 323 VVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECS 382

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAEL-TVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
           L+ F D+  SG+ PD   ++S+L AC+ L      G+QVH   LK+G      V  +L+ 
Sbjct: 383 LRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALID 442

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           VY+K G + +A  +F +    D+ +W A++ G   +   +EAL+ +  M  RG K D IT
Sbjct: 443 VYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQIT 502

Query: 541 FVGLLFACS-----------HAGLAENARWYFE------------------SMDKVYGIK 571
           F     A             HA + +  R++++                  S  KV+   
Sbjct: 503 FANAAKAAGCLVRLQQGKQIHAVVIK-MRFHYDLFVISGILDMYLKCGEMKSARKVFNQI 561

Query: 572 PGPDHYACMIDLLGRSGKLIEAKALLD----QMVG-EPDATVWKALLSACRVHGDLELGE 626
           P PD  A    + G      E +AL      ++ G +PD   +  L+ AC +   LE G+
Sbjct: 562 PSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGK 621

Query: 627 RAANNLFELE-PMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
           +   N+ +L    +      L +MY+  G  EDA  + + M +R +
Sbjct: 622 QIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSV 667


>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Cucumis sativus]
          Length = 1037

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 305/745 (40%), Positives = 455/745 (61%), Gaps = 3/745 (0%)

Query: 66   DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
            + +  N ++A Y+ S +L  A+++F+    ++  +++SLI G    G    A ELF +MQ
Sbjct: 295  ETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQ 354

Query: 126  LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             +  +P   T+ ++L  C+  G L +G Q H +AIK     +  +   L+D+Y+KC  + 
Sbjct: 355  RDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADV- 413

Query: 186  EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            E  + F +  + +N V W  M+  Y Q      + E FR M++EG+  NQFT+PSIL  C
Sbjct: 414  ETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTC 473

Query: 246  AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
             ++ A   G Q+H  ++ +GF+ NVYV S LIDMYAK G L  A R+L     D+ VSW 
Sbjct: 474  TSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWT 533

Query: 306  SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
            +MI G+ +     EAL LF++M  R I+ D+  + S ++  A    L   + +H+     
Sbjct: 534  AMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAA 593

Query: 366  GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
            GF     +NNALI +YA+ G +  A++ F  + DK+ ISW SL++G A  G +EEAL+ F
Sbjct: 594  GFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVF 653

Query: 426  SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
              M  +    +     S +SA A L  ++ GQQ+H++ LK+G  S   V NSL+ +YAK 
Sbjct: 654  VRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKS 713

Query: 486  GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
            G I+DA R F+ M  R+VI+W A+I G +Q+G G EAL+ +++M   G  P+++TFVG+L
Sbjct: 714  GSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVL 773

Query: 546  FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
             ACSH GL +    YFESM K++ + P  +HY C++DLLGR+G+L  A   + +M    D
Sbjct: 774  SACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPAD 833

Query: 606  ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
            A +W+ LLSAC +H ++E+GERAA++L ELEP ++  YV +SN+Y+ + +W      RKL
Sbjct: 834  AMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKL 893

Query: 666  MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFA 725
            MK RG++KEPG SW+E  + VH F + D+ HPL   IY  I  +     E GYV D +F+
Sbjct: 894  MKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQD-SFS 952

Query: 726  LHNVEEEGKEIGLAY-HSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
            L N  E+G++  + + HSEKLA+AFGLL+L    PIR+ KNLRVC DCH  +KY+S +  
Sbjct: 953  LLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISN 1012

Query: 785  RHIILRDSNRFHHFKAGNCSCGDYW 809
            R II+RD++RFHHF  G CSC D+W
Sbjct: 1013 RSIIVRDAHRFHHFDGGVCSCKDFW 1037



 Score =  245 bits (625), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 162/581 (27%), Positives = 281/581 (48%), Gaps = 16/581 (2%)

Query: 55  AGQLFEKMS----------DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSL 104
           +G LFE M           D +    ++++  Y   G    A K+F+E   ++ F+W+ +
Sbjct: 71  SGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKM 130

Query: 105 IYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL-LQRGEQFHGYAIKTC 163
           I+ +     + + F LF +M  EG  P+ YT   VL+ C    +     +Q H       
Sbjct: 131 IHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYG 190

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
           FD +  V   L+D+Y+K   I  A+ +F      K+ V W  MI+G SQNG   +AI  F
Sbjct: 191 FDSSPLVANLLIDLYSKNGYIESAKKVFNCIC-MKDIVTWVAMISGLSQNGLEEEAILLF 249

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
            DM    +    +   S+L+A   +   + G Q+H  ++  GF +  YV + L+ +Y++ 
Sbjct: 250 CDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRS 309

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
             L SA R+       + VS+NS+I G  +QGF   AL LF KM    +K D  T  S+L
Sbjct: 310 RKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLL 369

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVI 403
           +  AS   L+    +HS  +K G      +  +L+D+Y+K  +++ A   F   + ++++
Sbjct: 370 SACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIV 429

Query: 404 SWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVF 463
            W  ++       +  ++ + F  M++ G+ P+     SIL  C  L  L  G+Q+H   
Sbjct: 430 LWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHV 489

Query: 464 LKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEAL 523
           +K+G   ++ V + L+ +YAK G +  A R+   +   DV++WTA+I G  Q+    EAL
Sbjct: 490 IKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEAL 549

Query: 524 QFYDQMLARGTKPDYITFVGLLFACSHA-GLAENARWYFESMDKVYGIKPGPDHYACMID 582
           Q +++M  RG + D I F   + AC+    L +  + + +S    +G     ++   +I 
Sbjct: 550 QLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINN--ALIS 607

Query: 583 LLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
           L  R G++ EA    ++ +G+ +   W +L+S     G  E
Sbjct: 608 LYARCGRIQEAYLAFEK-IGDKNNISWNSLVSGLAQSGYFE 647



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/336 (33%), Positives = 177/336 (52%), Gaps = 1/336 (0%)

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           K I+    M   GV SN   +  +L  C    +     ++H  I  SGF+    +  +L+
Sbjct: 41  KRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLV 100

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
           D Y + GD   A ++ + +   +  SWN MI  F  Q  + +   LF++M A  I  + +
Sbjct: 101 DNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGY 160

Query: 338 TYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
           T+  VL  C   +I  N  K VHS     GF+    V N LID+Y+K G ++ A  VFN 
Sbjct: 161 TFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNC 220

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
           +  KD+++W ++I+G + +G  EEA+  F DM  S I P   V+SS+LSA  ++ + E G
Sbjct: 221 ICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELG 280

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
           +Q+H + +K G  S   V N LV +Y++   +  A R+F +M++RD +++ +LI G  Q 
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340

Query: 517 GKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
           G    AL+ + +M     KPD IT   LL AC+  G
Sbjct: 341 GFSDRALELFTKMQRDCLKPDCITVASLLSACASVG 376



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 120/265 (45%), Gaps = 49/265 (18%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           +N AL+  ++  G I EA   FEK+ D++  +WN++++  A SG                
Sbjct: 601 INNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFE------------- 647

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                             EA ++F +M       + +T  + +   +    +++G+Q H 
Sbjct: 648 ------------------EALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHS 689

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
             +KT +D    V   L+ +YAK   I +A   F    + +N ++W  MITGYSQ+G G 
Sbjct: 690 MVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSE-RNVISWNAMITGYSQHGCGM 748

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGA-------QVHGCILSSGFEANV 270
           +A+  F +M+V G+  N  TF  +L+AC+ +     G        ++H  +  S      
Sbjct: 749 EALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEH---- 804

Query: 271 YVQSALIDMYAKCGDLDSARRLLEY 295
           YV   ++D+  + G LD   R +EY
Sbjct: 805 YV--CVVDLLGRAGQLD---RAMEY 824



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 1/178 (0%)

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
           +L  C     L    ++H    KSG      + +SLV  Y + G  + A +VFD    R 
Sbjct: 64  LLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRS 123

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
           V +W  +I          +    + +MLA G  P+  TF G+L AC    +A N      
Sbjct: 124 VFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVH 183

Query: 563 SMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
           S    YG    P     +IDL  ++G +  AK + +  +   D   W A++S    +G
Sbjct: 184 SRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFN-CICMKDIVTWVAMISGLSQNG 240


>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g01510-like [Cucumis
           sativus]
          Length = 816

 Score =  580 bits (1495), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 293/770 (38%), Positives = 454/770 (58%), Gaps = 10/770 (1%)

Query: 45  DFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSL 104
           +F   G++  A Q+F++M  ++  + N MI+ +   G+L +A++LF+    +   +W+ L
Sbjct: 52  NFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTIL 111

Query: 105 IYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE---QFHGYAIK 161
           I GY       EAF L+  M+  G  P   TL   + L S  G L+      Q H + IK
Sbjct: 112 IGGYLQSNQSKEAFRLYADMRRGGIEPDYVTL---VTLLSGFGELETKNVIVQIHTHVIK 168

Query: 162 TCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIE 221
             ++ N  V   LVD Y K  C++ A  LFK   + K+ V + +++TGYS  G   +AIE
Sbjct: 169 LGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLN-KDTVTFNSLMTGYSNEGLNEEAIE 227

Query: 222 CFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYA 281
            F ++   G++ + FTF ++L+A   +    FG QVHG +L + F  NV+V +AL+D Y+
Sbjct: 228 LFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYS 287

Query: 282 KCGDLDSARRLL-EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
           K   +D   +L  E  E+D  +S+N +I  +A  G  KE+  LF+K+         F + 
Sbjct: 288 KHDQVDEVGKLFXEMPELDG-ISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFA 346

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
           ++L+   S+++L   + +H   +  G      V NAL+DMYAK      A  +F+ +  K
Sbjct: 347 TLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACK 406

Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
             + WT++I+     G +EE +  FSDMR +G+  D    +SIL ACA L  +  G+Q+H
Sbjct: 407 STVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLH 466

Query: 461 AVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGK 520
           ++ ++SG  S++   ++L+  YAKCGC+ DA + F  M  R+ ++W ALI   AQNG   
Sbjct: 467 SLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVD 526

Query: 521 EALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACM 580
             L  + QM+  G KPD ++F+ +L ACSH G  E A W+F SM ++Y + P  +HY  M
Sbjct: 527 GTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSM 586

Query: 581 IDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM-N 639
           +D+L R+G+  EA+ L+ +M  EP   +W ++L++CR+H + EL ++AA+ LF +E + +
Sbjct: 587 VDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRD 646

Query: 640 AMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLR 699
           A PY+ +SN+Y+ AG+W++ A+V+K M+ RG+RK P  SWVE   Q H+F + D+ HP  
Sbjct: 647 AAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEM 706

Query: 700 TDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAP 759
             I  KI+ +   +++ GY PD   ALH+V+E  K   L YHSE+ A+AF L+  P G+P
Sbjct: 707 KKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSP 766

Query: 760 IRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           I + KNLR C DCH A+K IS +  R II+RDS+RFHHFK G CSCGDYW
Sbjct: 767 IVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/391 (30%), Positives = 189/391 (48%), Gaps = 47/391 (12%)

Query: 42  ALVDF-SNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           AL+D+ S   ++DE G+LF +M + DG ++N +I +YA +G+ +                
Sbjct: 281 ALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFK---------------- 324

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
                          E+F+LF ++Q   +   Q+    +L + +    L+ G Q H  AI
Sbjct: 325 ---------------ESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAI 369

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAI 220
               +  + V   LVDMYAKC    EA+ +F      K+ V WT MI+ Y Q G   + I
Sbjct: 370 TVGANFESRVENALVDMYAKCNGDKEAQKIFDNIA-CKSTVPWTAMISAYVQKGKHEEGI 428

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
             F DMR  GV ++Q TF SIL ACA +++   G Q+H  ++ SGF +NVY  SAL+D Y
Sbjct: 429 NVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTY 488

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
           AKCG +  A +        N VSWN++I  +A+ G     L+ F++M     K D  ++ 
Sbjct: 489 AKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFL 548

Query: 341 SVLNC-----FASNI--DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
           SVL+      F        N+   ++ +  K   E Y     +++D+  + G  D A  +
Sbjct: 549 SVLSACSHCGFVEEALWHFNSMTQIYEVTPKR--EHY----TSMVDVLCRNGRFDEAEKL 602

Query: 394 FNLMQ-DKDVISWTSLITGCAYHGSYEEALK 423
              M  +   I W+S++  C  H ++E A K
Sbjct: 603 MTEMPFEPSEIMWSSVLNSCRIHKNHELAKK 633



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 109/235 (46%), Gaps = 31/235 (13%)

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVI 403
           N  A    LN+   + + IVKTGF      +N  ++ + ++G+L  A  VF+ M  K+ I
Sbjct: 16  NSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTI 75

Query: 404 -------------------------------SWTSLITGCAYHGSYEEALKYFSDMRISG 432
                                          SWT LI G       +EA + ++DMR  G
Sbjct: 76  SLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGG 135

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
           I PD+V + ++LS   EL       Q+H   +K G   +L V NSLV  Y K  C+  A+
Sbjct: 136 IEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLAS 195

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           ++F  M  +D +T+ +L+ G +  G  +EA++ + ++   G KP   TF  LL A
Sbjct: 196 QLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSA 250


>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Cucumis sativus]
          Length = 816

 Score =  580 bits (1495), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 293/770 (38%), Positives = 454/770 (58%), Gaps = 10/770 (1%)

Query: 45  DFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSL 104
           +F   G++  A Q+F++M  ++  + N MI+ +   G+L +A++LF+    +   +W+ L
Sbjct: 52  NFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTIL 111

Query: 105 IYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE---QFHGYAIK 161
           I GY       EAF L+  M+  G  P   TL   + L S  G L+      Q H + IK
Sbjct: 112 IGGYLQSNQSKEAFRLYADMRRGGIEPDYVTL---VTLLSGFGELETKNVIVQIHTHVIK 168

Query: 162 TCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIE 221
             ++ N  V   LVD Y K  C++ A  LFK   + K+ V + +++TGYS  G   +AIE
Sbjct: 169 LGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLN-KDTVTFNSLMTGYSNEGLNEEAIE 227

Query: 222 CFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYA 281
            F ++   G++ + FTF ++L+A   +    FG QVHG +L + F  NV+V +AL+D Y+
Sbjct: 228 LFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYS 287

Query: 282 KCGDLDSARRLL-EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
           K   +D   +L  E  E+D  +S+N +I  +A  G  KE+  LF+K+         F + 
Sbjct: 288 KHDQVDEVGKLFYEMPELDG-ISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFA 346

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
           ++L+   S+++L   + +H   +  G      V NAL+DMYAK      A  +F+ +  K
Sbjct: 347 TLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACK 406

Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
             + WT++I+     G +EE +  FSDMR +G+  D    +SIL ACA L  +  G+Q+H
Sbjct: 407 STVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLH 466

Query: 461 AVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGK 520
           ++ ++SG  S++   ++L+  YAKCGC+ DA + F  M  R+ ++W ALI   AQNG   
Sbjct: 467 SLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVD 526

Query: 521 EALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACM 580
             L  + QM+  G KPD ++F+ +L ACSH G  E A W+F SM ++Y + P  +HY  M
Sbjct: 527 GTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSM 586

Query: 581 IDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM-N 639
           +D+L R+G+  EA+ L+ +M  EP   +W ++L++CR+H + EL ++AA+ LF +E + +
Sbjct: 587 VDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRD 646

Query: 640 AMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLR 699
           A PY+ +SN+Y+ AG+W++ A+V+K M+ RG+RK P  SWVE   Q H+F + D+ HP  
Sbjct: 647 AAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEM 706

Query: 700 TDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAP 759
             I  KI+ +   +++ GY PD   ALH+V+E  K   L YHSE+ A+AF L+  P G+P
Sbjct: 707 KKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGSP 766

Query: 760 IRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           I + KNLR C DCH A+K IS +  R II+RDS+RFHHFK G CSCGDYW
Sbjct: 767 IVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 120/391 (30%), Positives = 189/391 (48%), Gaps = 47/391 (12%)

Query: 42  ALVDF-SNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           AL+D+ S   ++DE G+LF +M + DG ++N +I +YA +G+ +                
Sbjct: 281 ALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFK---------------- 324

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
                          E+F+LF ++Q   +   Q+    +L + +    L+ G Q H  AI
Sbjct: 325 ---------------ESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAI 369

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAI 220
               +  + V   LVDMYAKC    EA+ +F      K+ V WT MI+ Y Q G   + I
Sbjct: 370 TVGANFESRVENALVDMYAKCNGDKEAQKIFDNIA-CKSTVPWTAMISAYVQKGKHEEGI 428

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
             F DMR  GV ++Q TF SIL ACA +++   G Q+H  ++ SGF +NVY  SAL+D Y
Sbjct: 429 NVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTY 488

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
           AKCG +  A +        N VSWN++I  +A+ G     L+ F++M     K D  ++ 
Sbjct: 489 AKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFL 548

Query: 341 SVLNC-----FASNI--DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
           SVL+      F        N+   ++ +  K   E Y     +++D+  + G  D A  +
Sbjct: 549 SVLSACSHCGFVEEALWHFNSMTQIYEVTPKR--EHY----TSMVDVLCRNGRFDEAEKL 602

Query: 394 FNLMQ-DKDVISWTSLITGCAYHGSYEEALK 423
              M  +   I W+S++  C  H ++E A K
Sbjct: 603 MTEMPFEPSEIMWSSVLNSCRIHKNHELAKK 633



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 109/235 (46%), Gaps = 31/235 (13%)

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVI 403
           N  A    LN+   + + IVKTGF      +N  ++ + ++G+L  A  VF+ M  K+ I
Sbjct: 16  NSPAPKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTI 75

Query: 404 -------------------------------SWTSLITGCAYHGSYEEALKYFSDMRISG 432
                                          SWT LI G       +EA + ++DMR  G
Sbjct: 76  SLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGG 135

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
           I PD+V + ++LS   EL       Q+H   +K G   +L V NSLV  Y K  C+  A+
Sbjct: 136 IEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLAS 195

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           ++F  M  +D +T+ +L+ G +  G  +EA++ + ++   G KP   TF  LL A
Sbjct: 196 QLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSA 250


>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  580 bits (1494), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 304/745 (40%), Positives = 454/745 (60%), Gaps = 3/745 (0%)

Query: 66   DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
            + +  N ++A Y+ S +L  A+++F+    ++  +++SLI G    G    A ELF +MQ
Sbjct: 295  ETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQ 354

Query: 126  LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             +  +P   T+ ++L  C+  G L +G Q H +AIK     +  +   L+D+Y+KC  + 
Sbjct: 355  RDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADV- 413

Query: 186  EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            E  + F +  + +N V W  M+  Y Q      + E FR M++EG+  NQFT+PSIL  C
Sbjct: 414  ETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTC 473

Query: 246  AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
             ++ A   G Q+H  ++ +GF+ NVYV S LIDMYAK G L  A R+L     D+ VSW 
Sbjct: 474  TSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWT 533

Query: 306  SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
            +MI G+ +     EAL LF++M  R I+ D+  + S ++  A    L   + +H+     
Sbjct: 534  AMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAA 593

Query: 366  GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
            GF     +NNALI +YA+ G +  A++ F  + DK+ ISW SL++G A  G +EEAL+ F
Sbjct: 594  GFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVF 653

Query: 426  SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
              M  +    +     S +SA A L  ++ GQQ+H++ LK+G  S   V NSL+ +YAK 
Sbjct: 654  VRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKS 713

Query: 486  GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
            G I+DA R F+ M  R+VI+W A+I G +Q+G G EAL+ +++M   G  P+++TFVG+L
Sbjct: 714  GSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVL 773

Query: 546  FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
             ACSH GL +    YFESM K++ + P  +HY C++DLLGR+G+L  A   + +M    D
Sbjct: 774  SACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPAD 833

Query: 606  ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
            A +W+ LLSAC +H ++E+GERAA++L ELEP ++  YV +SN+Y+ + +W      RKL
Sbjct: 834  AMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKL 893

Query: 666  MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFA 725
            MK  G++KEPG SW+E  + VH F + D+ HPL   IY  I  +     E GYV D +F+
Sbjct: 894  MKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQD-SFS 952

Query: 726  LHNVEEEGKEIGLAY-HSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
            L N  E+G++  + + HSEKLA+AFGLL+L    PIR+ KNLRVC DCH  +KY+S +  
Sbjct: 953  LLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISN 1012

Query: 785  RHIILRDSNRFHHFKAGNCSCGDYW 809
            R II+RD++RFHHF  G CSC D+W
Sbjct: 1013 RSIIVRDAHRFHHFDGGVCSCKDFW 1037



 Score =  245 bits (625), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 162/581 (27%), Positives = 281/581 (48%), Gaps = 16/581 (2%)

Query: 55  AGQLFEKMS----------DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSL 104
           +G LFE M           D +    ++++  Y   G    A K+F+E   ++ F+W+ +
Sbjct: 71  SGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKM 130

Query: 105 IYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL-LQRGEQFHGYAIKTC 163
           I+ +     + + F LF +M  EG  P+ YT   VL+ C    +     +Q H       
Sbjct: 131 IHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYG 190

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
           FD +  V   L+D+Y+K   I  A+ +F      K+ V W  MI+G SQNG   +AI  F
Sbjct: 191 FDSSPLVANLLIDLYSKNGYIESAKKVFNCIC-MKDIVTWVAMISGLSQNGLEEEAILLF 249

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
            DM    +    +   S+L+A   +   + G Q+H  ++  GF +  YV + L+ +Y++ 
Sbjct: 250 CDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRS 309

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
             L SA R+       + VS+NS+I G  +QGF   AL LF KM    +K D  T  S+L
Sbjct: 310 RKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLL 369

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVI 403
           +  AS   L+    +HS  +K G      +  +L+D+Y+K  +++ A   F   + ++++
Sbjct: 370 SACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIV 429

Query: 404 SWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVF 463
            W  ++       +  ++ + F  M++ G+ P+     SIL  C  L  L  G+Q+H   
Sbjct: 430 LWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHV 489

Query: 464 LKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEAL 523
           +K+G   ++ V + L+ +YAK G +  A R+   +   DV++WTA+I G  Q+    EAL
Sbjct: 490 IKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEAL 549

Query: 524 QFYDQMLARGTKPDYITFVGLLFACSHA-GLAENARWYFESMDKVYGIKPGPDHYACMID 582
           Q +++M  RG + D I F   + AC+    L +  + + +S    +G     ++   +I 
Sbjct: 550 QLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINN--ALIS 607

Query: 583 LLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
           L  R G++ EA    ++ +G+ +   W +L+S     G  E
Sbjct: 608 LYARCGRIQEAYLAFEK-IGDKNNISWNSLVSGLAQSGYFE 647



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/336 (33%), Positives = 177/336 (52%), Gaps = 1/336 (0%)

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           K I+    M   GV SN   +  +L  C    +     ++H  I  SGF+    +  +L+
Sbjct: 41  KRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLV 100

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
           D Y + GD   A ++ + +   +  SWN MI  F  Q  + +   LF++M A  I  + +
Sbjct: 101 DNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGY 160

Query: 338 TYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
           T+  VL  C   +I  N  K VHS     GF+    V N LID+Y+K G ++ A  VFN 
Sbjct: 161 TFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNC 220

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
           +  KD+++W ++I+G + +G  EEA+  F DM  S I P   V+SS+LSA  ++ + E G
Sbjct: 221 ICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELG 280

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
           +Q+H + +K G  S   V N LV +Y++   +  A R+F +M++RD +++ +LI G  Q 
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340

Query: 517 GKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
           G    AL+ + +M     KPD IT   LL AC+  G
Sbjct: 341 GFSDRALELFTKMQRDCLKPDCITVASLLSACASVG 376



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 120/265 (45%), Gaps = 49/265 (18%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           +N AL+  ++  G I EA   FEK+ D++  +WN++++  A SG                
Sbjct: 601 INNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFE------------- 647

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                             EA ++F +M       + +T  + +   +    +++G+Q H 
Sbjct: 648 ------------------EALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHS 689

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
             +KT +D    V   L+ +YAK   I +A   F    + +N ++W  MITGYSQ+G G 
Sbjct: 690 MVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSE-RNVISWNAMITGYSQHGCGM 748

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGA-------QVHGCILSSGFEANV 270
           +A+  F +M+V G+  N  TF  +L+AC+ +     G        ++H  +  S      
Sbjct: 749 EALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEH---- 804

Query: 271 YVQSALIDMYAKCGDLDSARRLLEY 295
           YV   ++D+  + G LD   R +EY
Sbjct: 805 YV--CVVDLLGRAGQLD---RAMEY 824



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 1/178 (0%)

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
           +L  C     L    ++H    KSG      + +SLV  Y + G  + A +VFD    R 
Sbjct: 64  LLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRS 123

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
           V +W  +I          +    + +MLA G  P+  TF G+L AC    +A N      
Sbjct: 124 VFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVH 183

Query: 563 SMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
           S    YG    P     +IDL  ++G +  AK + +  +   D   W A++S    +G
Sbjct: 184 SRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFN-CICMKDIVTWVAMISGLSQNG 240


>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  579 bits (1492), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 297/747 (39%), Positives = 439/747 (58%), Gaps = 7/747 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  + ++  YA  G +  A K+F   P +N  TW+ L+ GY+  G      +LF  M 
Sbjct: 247 DLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMM 306

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
               + +++TL  VL+ C+    L++G+  H   IK  ++ N F+  GLVDMY+KC    
Sbjct: 307 ELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAI 366

Query: 186 EAEYLFKMF--PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +A  +FK    PD    V W+ +IT   Q G   ++I+ F  MR+     NQ+T  S+L+
Sbjct: 367 DAIGVFKTIKKPD---IVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLS 423

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE-V 302
           A        +G  +H C+   GFE +V V +AL+ MY K G +    +L E S +D + +
Sbjct: 424 AATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYE-SMVDRDLI 482

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SWN+ + G    G +   L++F  M       + +T+ S+L   +   D++  + VH+ I
Sbjct: 483 SWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHI 542

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           +K   +   FV  ALIDMYAK   L+ A + FN +  +D+ +WT +IT  A     E+AL
Sbjct: 543 IKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKAL 602

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
            YF  M+  G+ P+   ++  LS C+ L  LE GQQ+H++  KSG  S + V ++LV +Y
Sbjct: 603 NYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMY 662

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
           AKCGC+ +A  +F+++  RD I W  +I G AQNG+G +AL  +  ML  G  PD +TF 
Sbjct: 663 AKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFT 722

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
           G+L ACSH GL E  + +F SM + +GI P  DH ACM+D+LGR GK  E +  + +M  
Sbjct: 723 GILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQL 782

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
             +A +W+ +L A ++H +L LGE+AAN LFEL+P     Y+ LSN+++T G+W+D  RV
Sbjct: 783 SQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRV 842

Query: 663 RKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDM 722
           R LM S+G++KEPGCSWVE N QVH F+S D  HP   +I+ K+DE+   +    YVP  
Sbjct: 843 RSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKT 902

Query: 723 NFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAV 782
            + LHNV E  K+  L +HSE+LA+ F L++      IRIFKNLR+C DCH  MK+IS++
Sbjct: 903 EYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSI 962

Query: 783 YLRHIILRDSNRFHHFKAGNCSCGDYW 809
             + I++RD  RFHHFK G CSC D+W
Sbjct: 963 TNQEIVVRDVRRFHHFKNGACSCNDFW 989



 Score =  268 bits (686), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 159/524 (30%), Positives = 274/524 (52%), Gaps = 25/524 (4%)

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           ++LR C+ K  L   +  HG  +K   + ++ +   LV++YAKC+    A  +    PD 
Sbjct: 117 SMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPD- 175

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           ++ V+WT +I G    G+   +I  F++M+ EG+  N+FT  + L AC+   A D G Q+
Sbjct: 176 RDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQM 235

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           H      G   +++V SAL+D+YAKCG+++ A ++       N+V+WN ++ G+A++G  
Sbjct: 236 HAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDV 295

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
              L LF  M   D+K ++FT  +VL   A++ +L   + +HSLI+K G+EG +F+   L
Sbjct: 296 TGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGL 355

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           +DMY+K G    A  VF  ++  D++ W++LIT     G  EE++K F  MR+    P+ 
Sbjct: 356 VDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQ 415

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
             + S+LSA      L++GQ +HA   K G  + ++V N+LV +Y K GC++D  ++++S
Sbjct: 416 YTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYES 475

Query: 498 MHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS-----HAG 552
           M  RD+I+W A + G    G     L  +  ML  G  P+  TF+ +L +CS     H G
Sbjct: 476 MVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYG 535

Query: 553 LAENARWYFESMDKVYGIKPGPDHYAC--MIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
              +A      +D         +++ C  +ID+  +   L +A    +++    D   W 
Sbjct: 536 RQVHAHIIKNQLDD--------NNFVCTALIDMYAKCMYLEDADVAFNRL-SVRDLFTWT 586

Query: 611 ALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAG 654
            +++    +     GE+A N   +++     P     N ++ AG
Sbjct: 587 VIITN---YAQTNQGEKALNYFRQMQQEGVKP-----NEFTLAG 622



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 193/402 (48%), Gaps = 11/402 (2%)

Query: 223 FRDMRVEGVESNQFT---------FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
           F   + E  + NQ           + S+L  CA+  +      +HG I+      + ++ 
Sbjct: 91  FEHQKTEDAKGNQVCWSSKKKLKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLW 150

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
            +L+++YAKC     AR +L      + VSW ++I G   +GF  +++ LF++M    I 
Sbjct: 151 VSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIM 210

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
            ++FT  + L   +  + L+  K +H+   K G     FV +AL+D+YAK G ++ A  +
Sbjct: 211 PNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKM 270

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           F  M +++ ++W  L+ G A  G     LK F  M    +  +   ++++L  CA    L
Sbjct: 271 FIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNL 330

Query: 454 EFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC 513
           + GQ +H++ +K G   +  +   LV +Y+KCG   DA  VF ++   D++ W+ALI   
Sbjct: 331 KQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCL 390

Query: 514 AQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPG 573
            Q G+ +E+++ +  M    T P+  T   LL A ++ G  +  +     + K YG +  
Sbjct: 391 DQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWK-YGFETD 449

Query: 574 PDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
                 ++ +  ++G + +   L + MV + D   W A LS 
Sbjct: 450 VAVSNALVTMYMKNGCVHDGTKLYESMV-DRDLISWNAYLSG 490



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 153/310 (49%), Gaps = 10/310 (3%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D + F    +I  YA    L +A   FN    ++ FTW+ +I  Y+      +A   F Q
Sbjct: 548 DDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQ 607

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           MQ EG +P+++TL   L  CS    L+ G+Q H    K+    + FV + LVDMYAKC C
Sbjct: 608 MQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGC 667

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + EAE LF+     ++ +AW T+I GY+QNG G KA+  FR M  EG+  +  TF  IL+
Sbjct: 668 MEEAEALFEALIR-RDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILS 726

Query: 244 ACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI-DNE 301
           AC+     + G +    +    G    V   + ++D+  + G  D     ++  ++  N 
Sbjct: 727 ACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNA 786

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKI---DDFTYPSVLNCFASNIDLNNAKSV 358
           + W + ++G ++       L L +K   +  ++   ++ +Y  + N FA+    ++ K V
Sbjct: 787 LIWET-VLGASKM---HNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRV 842

Query: 359 HSLIVKTGFE 368
            SL+   G +
Sbjct: 843 RSLMSSKGVK 852



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 35/169 (20%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           ALVD ++  G ++EA  LFE +  RD   WNT+I  YA +G+  +A              
Sbjct: 657 ALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKA-------------- 702

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
                         + AF +   M  EG  P   T   +L  CS +GL++ G++ H  ++
Sbjct: 703 --------------LTAFRM---MLDEGISPDGVTFTGILSACSHQGLVEEGKE-HFNSM 744

Query: 161 KTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
              F ++  V     +VD+  +     E E   +     +N + W T++
Sbjct: 745 YRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVL 793


>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score =  578 bits (1489), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 302/799 (37%), Positives = 469/799 (58%), Gaps = 10/799 (1%)

Query: 19  IIGPARYTHNVGNS-VKPASDLNRALVDFS-----NSGEIDEAGQLFEKMSDRDGFTWNT 72
           +  P R+  +V  S +K   D N    +F        G++  A +LF++M  ++  + NT
Sbjct: 19  LTSPKRHFQHVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNT 78

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           MI  Y  SG L  A+ LF+    ++  TW+ LI GY+ +   +EAF LF  M   G  P 
Sbjct: 79  MIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPD 138

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
             TL  +L   +    +    Q HG+ +K  +D    V   L+D Y K + +  A +LFK
Sbjct: 139 HITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFK 198

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
              + K++V +  ++TGYS+ G+   AI  F  M+  G   ++FTF ++LTA   +   +
Sbjct: 199 HMAE-KDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIE 257

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL-EYSEIDNEVSWNSMIVGF 311
           FG QVH  ++   F  NV+V +AL+D Y+K   +  AR+L  E  E+D  +S+N +I   
Sbjct: 258 FGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDG-ISYNVLITCC 316

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
           A  G  +E+L LF+++         F + ++L+  A++++L   + +HS  + T      
Sbjct: 317 AWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEV 376

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
            V N+L+DMYAK      A  +F  +  +  + WT+LI+G    G +E+ LK F +M  +
Sbjct: 377 LVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRA 436

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
            I  D    +SIL ACA L  L  G+Q+H+  ++SG  S++   ++LV +YAKCG I +A
Sbjct: 437 KIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEA 496

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
            ++F  M  R+ ++W ALI   AQNG G  AL+ ++QM+  G +P+ ++F+ +L ACSH 
Sbjct: 497 LQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHC 556

Query: 552 GLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKA 611
           GL E    YF SM +VY ++P  +HYA M+D+L RSG+  EA+ L+ +M  EPD  +W +
Sbjct: 557 GLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSS 616

Query: 612 LLSACRVHGDLELGERAANNLFELEPM-NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRG 670
           +L++CR+H + EL  +AA+ LF ++ + +A PYV +SN+Y+ AG+W+   +V+K ++ RG
Sbjct: 617 ILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERG 676

Query: 671 IRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVE 730
           IRK P  SWVE   + H+F + D  HP   +I  K+DE+   ++E GY PD   ALHNV+
Sbjct: 677 IRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDELEKQMEEQGYKPDSTCALHNVD 736

Query: 731 EEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILR 790
           EE K   L YHSE++A+AF L++ P+G+PI + KNLR C DCH A+K IS +  R I +R
Sbjct: 737 EEVKVESLKYHSERIAIAFALISTPKGSPILVMKNLRACNDCHAAIKVISKIVNREITVR 796

Query: 791 DSNRFHHFKAGNCSCGDYW 809
           DS+RFHHF  G+CSC DYW
Sbjct: 797 DSSRFHHFTDGSCSCKDYW 815


>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 304/761 (39%), Positives = 458/761 (60%), Gaps = 10/761 (1%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK-NFFTWSSLIYGYSNYGLDI 115
           +L +   + D    NT+I+ Y+  G    A+ +F     K +  +WS+++  ++N  ++ 
Sbjct: 69  KLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEW 128

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG-- 173
           +A   F  M   G+ P++Y    V+R CS       GE  +G+ +KT + L A V  G  
Sbjct: 129 QAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGY-LEADVCVGCE 187

Query: 174 LVDMYAKCKCIFEAEY-LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
           L+DM+ K      + Y +F   P+ +N V WT MIT ++Q G    AI+ F DM + G  
Sbjct: 188 LIDMFVKGSGDLGSAYKVFDKMPE-RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYV 246

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC---GDLDSA 289
            ++FT+ S+L+AC  +     G Q+H  ++  G   +V V  +L+DMYAKC   G +D +
Sbjct: 247 PDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDS 306

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQG-FHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
           R++ E     N +SW ++I  + + G   KEA+ LF KM +  I+ + F++ SVL    +
Sbjct: 307 RKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 366

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
             D    + V+S  VK G      V N+LI MYA+ G ++ A   F+++ +K+++S+ ++
Sbjct: 367 LSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAI 426

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
           + G A +   EEA   F+++  +GI       +S+LS  A +  +  G+Q+H   LK G 
Sbjct: 427 VDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGY 486

Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
            S+  + N+L+ +Y++CG I  A +VF+ M  R+VI+WT++I G A++G    AL+ + +
Sbjct: 487 KSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHK 546

Query: 529 MLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSG 588
           ML  GTKP+ IT+V +L ACSH G+    + +F SM K +GI P  +HYACM+DLLGRSG
Sbjct: 547 MLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSG 606

Query: 589 KLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSN 648
            L+EA   ++ M    DA VW+ LL ACRVHG+ ELG  AA  + E EP +   Y+ LSN
Sbjct: 607 LLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSN 666

Query: 649 MYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDE 708
           ++++AG+W+D  ++RK MK R + KE GCSW+E  ++VH F   +  HP    IY ++D+
Sbjct: 667 LHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQ 726

Query: 709 IMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRV 768
           +   IKE GY+PD +F LH++EEE KE  L  HSEK+AVAFGL++  Q  PIRIFKNLRV
Sbjct: 727 LASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRV 786

Query: 769 CGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           CGDCHTA+KYIS    R I++RDSNRFHH K G CSC DYW
Sbjct: 787 CGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 827



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 154/495 (31%), Positives = 256/495 (51%), Gaps = 40/495 (8%)

Query: 49  SGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY 108
           SG++  A ++F+KM +R+  TW  MI  +A  G  R+A                      
Sbjct: 196 SGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDA---------------------- 233

Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA 168
                     +LF  M+L GY P ++T  +VL  C+  GLL  G+Q H   I+    L+ 
Sbjct: 234 ---------IDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDV 284

Query: 169 FVVTGLVDMYAKCKC---IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFK-AIECFR 224
            V   LVDMYAKC     + ++  +F+  P+  N ++WT +IT Y Q+G   K AIE F 
Sbjct: 285 CVGCSLVDMYAKCAADGSVDDSRKVFEQMPE-HNVMSWTAIITAYVQSGECDKEAIELFC 343

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
            M    +  N F+F S+L AC  +S    G QV+   +  G  +   V ++LI MYA+ G
Sbjct: 344 KMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSG 403

Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
            ++ AR+  +     N VS+N+++ G+A+    +EA  LF ++    I I  FT+ S+L+
Sbjct: 404 RMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLS 463

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
             AS   +   + +H  ++K G++  + + NALI MY++ GN++ AF VFN M+D++VIS
Sbjct: 464 GAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVIS 523

Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ-VHAVF 463
           WTS+ITG A HG    AL+ F  M  +G  P+ +   ++LSAC+ + ++  GQ+  ++++
Sbjct: 524 WTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMY 583

Query: 464 LKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMGCAQNGKGKEA 522
            + G    +     +V +  + G + +A    +SM    D + W  L+  C  +G  +  
Sbjct: 584 KEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELG 643

Query: 523 LQFYDQMLARGTKPD 537
               + +L +  +PD
Sbjct: 644 RHAAEMILEQ--EPD 656



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 147/516 (28%), Positives = 260/516 (50%), Gaps = 20/516 (3%)

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
           AF     M  +   P   T   +L+ C      Q G+  H   +++  +L++ V+  L+ 
Sbjct: 28  AFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 87

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           +Y+KC     A  +F+   + ++ V+W+ M++ ++ N   ++AI  F DM   G   N++
Sbjct: 88  LYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEY 147

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGF-EANVYVQSALIDMYAK-CGDLDSARRLLE 294
            F +++ AC+  +    G  ++G ++ +G+ EA+V V   LIDM+ K  GDL SA ++ +
Sbjct: 148 CFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFD 207

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
                N V+W  MI  FA+ G  ++A+ LF  M       D FTY SVL+       L  
Sbjct: 208 KMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLAL 267

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAK---QGNLDCAFMVFNLMQDKDVISWTSLITG 411
            K +HS +++ G      V  +L+DMYAK    G++D +  VF  M + +V+SWT++IT 
Sbjct: 268 GKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITA 327

Query: 412 CAYHGSYE-EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
               G  + EA++ F  M    I P+H   SS+L AC  L+    G+QV++  +K G  S
Sbjct: 328 YVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIAS 387

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
              V NSL+ +YA+ G + DA + FD +  ++++++ A++ G A+N K +EA   ++++ 
Sbjct: 388 VNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIA 447

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPGPDHYAC----MIDLL 584
             G      TF  LL   +  G            ++++G  +K G     C    +I + 
Sbjct: 448 DTGIGISAFTFASLLSGAASIGAMGKG-------EQIHGRLLKGGYKSNQCICNALISMY 500

Query: 585 GRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
            R G +  A  + ++M  + +   W ++++    HG
Sbjct: 501 SRCGNIEAAFQVFNEM-EDRNVISWTSMITGFAKHG 535



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 211/436 (48%), Gaps = 39/436 (8%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS 109
           G +D++ ++FE+M + +  +W  +I AY  SG                            
Sbjct: 301 GSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGE--------------------------- 333

Query: 110 NYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAF 169
               D EA ELF +M     RP+ ++  +VL+ C        GEQ + YA+K        
Sbjct: 334 ---CDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNC 390

Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
           V   L+ MYA+   + +A   F +  + KN V++  ++ GY++N    +A   F ++   
Sbjct: 391 VGNSLISMYARSGRMEDARKAFDILFE-KNLVSYNAIVDGYAKNLKSEEAFLLFNEIADT 449

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
           G+  + FTF S+L+  A++ A   G Q+HG +L  G+++N  + +ALI MY++CG++++A
Sbjct: 450 GIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAA 509

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFAS 348
            ++    E  N +SW SMI GFA+ GF   AL +F KM     K ++ TY +VL+ C   
Sbjct: 510 FQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHV 569

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTS 407
            +     K  +S+  + G          ++D+  + G L  A    N M    D + W +
Sbjct: 570 GMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRT 629

Query: 408 LITGCAYHGSYEEALKYFSDMRISGICPD---HVVVSSILSACAELT-VLEFGQQVHAV- 462
           L+  C  HG+ E   ++ ++M +     D   ++++S++ ++  +   V++  + +    
Sbjct: 630 LLGACRVHGNTELG-RHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERN 688

Query: 463 FLKSGGCSSLSVDNSL 478
            +K  GCS + V+N +
Sbjct: 689 LIKEAGCSWIEVENRV 704



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 115/229 (50%), Gaps = 33/229 (14%)

Query: 21  GPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           G   Y++ V   +   + +  +L+  ++ SG +++A + F+ + +++  ++N ++  YA 
Sbjct: 373 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 432

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
           + +  EA  LFNE                ++ G+ I AF                T  ++
Sbjct: 433 NLKSEEAFLLFNEI---------------ADTGIGISAF----------------TFASL 461

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKN 199
           L   +  G + +GEQ HG  +K  +  N  +   L+ MY++C  I  A  +F    D +N
Sbjct: 462 LSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMED-RN 520

Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
            ++WT+MITG++++G+  +A+E F  M   G + N+ T+ ++L+AC+ V
Sbjct: 521 VISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHV 569



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 35/163 (21%), Positives = 64/163 (39%), Gaps = 32/163 (19%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +S  G I+ A Q+F +M DR+  +W +MI                               
Sbjct: 500 YSRCGNIEAAFQVFNEMEDRNVISWTSMIT------------------------------ 529

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ-FHGYAIKTCF 164
            G++ +G    A E+F +M   G +P++ T   VL  CS  G++  G++ F+    +   
Sbjct: 530 -GFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGI 588

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
                    +VD+  +   + EA       P   + + W T++
Sbjct: 589 VPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 631


>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 295/729 (40%), Positives = 458/729 (62%), Gaps = 8/729 (1%)

Query: 86  AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL 145
           +++LF+ETP +     + L++ +S    + EA  LF  ++  G      +L  VL++C  
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104

Query: 146 KGLLQR--GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAW 203
             L  R  G+Q H   IK  F  +  V T LVDMY K + + + E +F      KN V+W
Sbjct: 105 --LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEM-RVKNVVSW 161

Query: 204 TTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS 263
           T+++ GY QNG   +A++ F  M++EG++ N FTF ++L   AA  A + G QVH  ++ 
Sbjct: 162 TSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIK 221

Query: 264 SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSL 323
           SG ++ ++V +++++MY+K   +  A+ + +  E  N VSWNSMI GF   G   EA  L
Sbjct: 222 SGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFEL 281

Query: 324 FKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK 383
           F +M    +K+    + +V+   A+  +++ AK +H  ++K G +    +  AL+  Y+K
Sbjct: 282 FYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSK 341

Query: 384 QGNLDCAFMVFNLMQD-KDVISWTSLITGCAYHGSYEEALKYFSDMRIS-GICPDHVVVS 441
              +D AF +F +M   ++V+SWT++I+G   +G  + A+  F  MR   G+ P+    S
Sbjct: 342 CSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFS 401

Query: 442 SILSACAELTV-LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT 500
           S+L+ACA  T  +E G+Q H+  +KSG  ++L V ++LV +YAK G I  AN VF     
Sbjct: 402 SVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVD 461

Query: 501 RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWY 560
           RD+++W ++I G AQ+G GK++L+ +++M ++  + D ITF+G++ AC+HAGL    + Y
Sbjct: 462 RDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRY 521

Query: 561 FESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
           F+ M K Y I P  +HY+CM+DL  R+G L +A  L+++M     AT+W+ LL+ACRVH 
Sbjct: 522 FDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHL 581

Query: 621 DLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWV 680
           +++LGE AA  L  L+P ++  YV LSN+Y+TAG W++ A+VRKLM  + ++KE G SW+
Sbjct: 582 NVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWI 641

Query: 681 ETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAY 740
           E  ++   F++ D  HP    IY K++E+ + +K+AGY PD  + LH+VEEE KE+ L+ 
Sbjct: 642 EVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQ 701

Query: 741 HSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKA 800
           HSE+LA+AFGL+  P G PI+I KNLRVCGDCHT +K IS +  R I++RDSNRFHHFK 
Sbjct: 702 HSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKG 761

Query: 801 GNCSCGDYW 809
           G+CSCGDYW
Sbjct: 762 GSCSCGDYW 770



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 139/448 (31%), Positives = 249/448 (55%), Gaps = 6/448 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
            +++  Y  +  + + +++F+E   KN  +W+SL+ GY   GL+ +A +LF QMQLEG +
Sbjct: 131 TSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIK 190

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+ +T   VL   +  G +++G Q H   IK+  D   FV   +V+MY+K   + +A+ +
Sbjct: 191 PNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAV 250

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F    + +N V+W +MI G+  NG   +A E F  MR+EGV+  Q  F +++  CA +  
Sbjct: 251 FDSM-ENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKE 309

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL-EYSEIDNEVSWNSMIV 309
             F  Q+H  ++ +G + ++ +++AL+  Y+KC ++D A +L      + N VSW ++I 
Sbjct: 310 MSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIIS 369

Query: 310 GFARQGFHKEALSLFKKMHARD-IKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGF 367
           G+ + G    A++LF +M   + ++ ++FT+ SVLN C A    +   K  HS  +K+GF
Sbjct: 370 GYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGF 429

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
                V++AL+ MYAK+GN++ A  VF    D+D++SW S+I+G A HG  +++LK F +
Sbjct: 430 SNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEE 489

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG-CSSLSVDNSLVLVYAKCG 486
           MR   +  D +    ++SAC    ++  GQ+   + +K      ++   + +V +Y++ G
Sbjct: 490 MRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAG 549

Query: 487 CINDANRVFDSM-HTRDVITWTALIMGC 513
            +  A  + + M        W  L+  C
Sbjct: 550 MLEKAMDLINKMPFPAGATIWRTLLAAC 577



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/360 (35%), Positives = 203/360 (56%), Gaps = 12/360 (3%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D   F  N+M+  Y+ S  + +AK +F+    +N  +W+S+I G+   GLD+EAFELF++
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYR 284

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+LEG + +Q     V++LC+    +   +Q H   IK   D +  + T L+  Y+KC  
Sbjct: 285 MRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSE 344

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV-EGVESNQFTFPSIL 242
           I +A  LF M    +N V+WT +I+GY QNG   +A+  F  MR  EGVE N+FTF S+L
Sbjct: 345 IDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVL 404

Query: 243 TACAAVSAR-DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
            ACAA +A  + G Q H C + SGF   + V SAL+ MYAK G+++SA  + +     + 
Sbjct: 405 NACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDL 464

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           VSWNSMI G+A+ G  K++L +F++M ++++++D  T+  V++       +N  +    L
Sbjct: 465 VSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDL 524

Query: 362 IVK-----TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYH 415
           +VK        E Y    + ++D+Y++ G L+ A  + N M        W +L+  C  H
Sbjct: 525 MVKDYHIVPTMEHY----SCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVH 580



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 33/173 (19%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           ++ ALV  ++  G I+ A ++F++  DRD  +WN+MI+ YA  G  +++ K+F E   KN
Sbjct: 435 VSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKN 494

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                                     ++L+G      T   V+  C+  GL+  G+++  
Sbjct: 495 --------------------------LELDG-----ITFIGVISACTHAGLVNEGQRYFD 523

Query: 158 YAIKTCFDLNAFV-VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
             +K    +      + +VD+Y++   + +A  L    P       W T++  
Sbjct: 524 LMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAA 576


>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score =  577 bits (1487), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 302/741 (40%), Positives = 440/741 (59%), Gaps = 4/741 (0%)

Query: 71   NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
            N ++  YA SG + +A+ +F+    ++ F+W+ +I G + +G   EAF LF QMQ  G  
Sbjct: 359  NALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCL 418

Query: 131  PSQYTLDNVLRLCSLKGL--LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
            P+  T  ++L   ++     L+  +  H +A +  F  +  +   L+ MYAKC  I +A 
Sbjct: 419  PNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDAR 478

Query: 189  YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
             +F    D ++ ++W  M+ G +QNG G +A   F  M+ EG+  +  T+ S+L    + 
Sbjct: 479  LVFDGMCD-RDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGST 537

Query: 249  SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
             A ++  +VH   + +G  ++  V SA I MY +CG +D AR L +   + +  +WN+MI
Sbjct: 538  DALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMI 597

Query: 309  VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
             G A+Q   +EALSLF +M       D  T+ ++L+       L   K VHS     G  
Sbjct: 598  GGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLV 657

Query: 369  GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
              + V NAL+  Y+K GN+  A  VF+ M +++V +WT +I G A HG   +A  +F  M
Sbjct: 658  DLR-VGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQM 716

Query: 429  RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
               GI PD     SILSACA    LE+ ++VH   + +G  S L V N+LV +YAKCG I
Sbjct: 717  LREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSI 776

Query: 489  NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
            +DA  VFD M  RDV +WT +I G AQ+G+G EAL F+ +M + G KP+  ++V +L AC
Sbjct: 777  DDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTAC 836

Query: 549  SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
            SHAGL +  R  F SM + YGI+P  +HY CM+DLLGR+G L EA+  +  M  EPD   
Sbjct: 837  SHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAP 896

Query: 609  WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
            W ALL AC  +G+LE+ E AA    +L+P +A  YV LSN+Y+  GKWE    VR +M+ 
Sbjct: 897  WGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQR 956

Query: 669  RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHN 728
            +GIRKEPG SW+E ++++H F+  D  HP   +IY+++++++  +K  GYVPD    L N
Sbjct: 957  KGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLKAKGYVPDTRLVLRN 1016

Query: 729  VEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHII 788
             ++E KE  L  HSEKLA+ +GL+      PIR++KNLRVC DCHTA K+IS +  R I+
Sbjct: 1017 TDQEHKEQALCSHSEKLAIVYGLMHTQSKDPIRVYKNLRVCSDCHTATKFISKITGREIV 1076

Query: 789  LRDSNRFHHFKAGNCSCGDYW 809
             RD+ RFHHFK G CSCGDYW
Sbjct: 1077 ARDAKRFHHFKDGVCSCGDYW 1097



 Score =  301 bits (771), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 205/650 (31%), Positives = 330/650 (50%), Gaps = 50/650 (7%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           +++ +  N ++  Y   GRL+ A+++F++   KN + W+++I GY+ YG   +A  ++ +
Sbjct: 150 EQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDK 209

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+ E  +P++ T  ++L+ C     L+ G++ H + I++ F  +  V T LV+MY KC  
Sbjct: 210 MRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGS 269

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I +A+ +F    + +N ++WT MI G +  G G +A   F  M+ EG   N +T+ SIL 
Sbjct: 270 IEDAQLIFDKMVE-RNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILN 328

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           A A+  A ++  +VH   +++G   ++ V +AL+ MYAK G +D AR + +     +  S
Sbjct: 329 ANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFS 388

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN--CFASNIDLNNAKSVHSL 361
           W  MI G A+ G  +EA SLF +M       +  TY S+LN    AS   L   K VH  
Sbjct: 389 WTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKH 448

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
             + GF     + NALI MYAK G++D A +VF+ M D+DVISW +++ G A +G   EA
Sbjct: 449 AEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEA 508

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
              F  M+  G+ PD     S+L+       LE+  +VH   +++G  S   V ++ + +
Sbjct: 509 FTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHM 568

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           Y +CG I+DA  +FD +  R V TW A+I G AQ   G+EAL  + QM   G  PD  TF
Sbjct: 569 YIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTF 628

Query: 542 VGLLFA----------------CSHAGLAE---------------NARWYFESMDKVYGI 570
           + +L A                 + AGL +               N ++  +  D +  +
Sbjct: 629 INILSANVDEEALEWVKEVHSHATDAGLVDLRVGNALVHTYSKCGNVKYAKQVFDDM--V 686

Query: 571 KPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE---PDATVWKALLSACRVHGDLELGER 627
           +     +  MI  L + G   +A +   QM+ E   PDAT + ++LSAC   G LE  + 
Sbjct: 687 ERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKE 746

Query: 628 AANN------LFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
             N+      + +L   NA     L +MY+  G  +DA  V   M  R +
Sbjct: 747 VHNHAVSAGLVSDLRVGNA-----LVHMYAKCGSIDDARSVFDDMVERDV 791



 Score =  281 bits (720), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 191/605 (31%), Positives = 296/605 (48%), Gaps = 42/605 (6%)

Query: 21  GPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           G   + H + +  +    +  ALV+ +   G I++A  +F+KM +R+  +W  MI   A+
Sbjct: 238 GKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAH 297

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
            GR +                               EAF LF QMQ EG+ P+ YT  ++
Sbjct: 298 YGRGQ-------------------------------EAFHLFLQMQREGFIPNSYTYVSI 326

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKN 199
           L   +  G L+  ++ H +A+     L+  V   LV MYAK   I +A  +F    + ++
Sbjct: 327 LNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTE-RD 385

Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL--TACAAVSARDFGAQV 257
             +WT MI G +Q+G G +A   F  M+  G   N  T+ SIL  +A A+ SA ++   V
Sbjct: 386 IFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVV 445

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           H     +GF +++ + +ALI MYAKCG +D AR + +     + +SWN+M+ G A+ G  
Sbjct: 446 HKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCG 505

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
            EA ++F +M    +  D  TY S+LN   S   L     VH   V+TG      V +A 
Sbjct: 506 HEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAF 565

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           I MY + G++D A ++F+ +  + V +W ++I G A      EAL  F  M+  G  PD 
Sbjct: 566 IHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDA 625

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
               +ILSA  +   LE+ ++VH+      G   L V N+LV  Y+KCG +  A +VFD 
Sbjct: 626 TTFINILSANVDEEALEWVKEVHS-HATDAGLVDLRVGNALVHTYSKCGNVKYAKQVFDD 684

Query: 498 MHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENA 557
           M  R+V TWT +I G AQ+G G +A   + QML  G  PD  T+V +L AC+  G  E  
Sbjct: 685 MVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALE-- 742

Query: 558 RWYFESMDKVYGIKPGPDHYA--CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
            W  E  +         D      ++ +  + G + +A+++ D MV E D   W  ++  
Sbjct: 743 -WVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMV-ERDVFSWTVMIGG 800

Query: 616 CRVHG 620
              HG
Sbjct: 801 LAQHG 805



 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 170/491 (34%), Positives = 256/491 (52%), Gaps = 9/491 (1%)

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
           +G     ++  N+L+ C  +  +   +Q H   IK+  + N +V   L+ +Y +C  +  
Sbjct: 112 QGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQC 171

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A  +F      KN   WTTMI GY++ G+   A+  +  MR E  + N+ T+ SIL AC 
Sbjct: 172 ARQVFDKLLK-KNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACC 230

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
                 +G ++H  I+ SGF+++V V++AL++MY KCG ++ A+ + +     N +SW  
Sbjct: 231 CPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTV 290

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           MI G A  G  +EA  LF +M       + +TY S+LN  AS   L   K VHS  V  G
Sbjct: 291 MIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAG 350

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
                 V NAL+ MYAK G++D A +VF+ M ++D+ SWT +I G A HG  +EA   F 
Sbjct: 351 LALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFL 410

Query: 427 DMRISGICPDHVVVSSIL--SACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
            M+ +G  P+     SIL  SA A  + LE+ + VH    ++G  S L + N+L+ +YAK
Sbjct: 411 QMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAK 470

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG I+DA  VFD M  RDVI+W A++ G AQNG G EA   + QM   G  PD  T++ L
Sbjct: 471 CGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSL 530

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHY--ACMIDLLGRSGKLIEAKALLDQMVG 602
           L   +  G  +   W  E            D    +  I +  R G + +A+ L D++  
Sbjct: 531 L---NTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKL-S 586

Query: 603 EPDATVWKALL 613
               T W A++
Sbjct: 587 VRHVTTWNAMI 597



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 136/453 (30%), Positives = 233/453 (51%), Gaps = 19/453 (4%)

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
           +G+  + F++ +IL  C          QVH CI+ SG E N+YV + L+ +Y +CG L  
Sbjct: 112 QGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQC 171

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
           AR++ +     N   W +MI G+A  G  ++A+ ++ KM     + ++ TY S+L     
Sbjct: 172 ARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCC 231

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
            ++L   K +H+ I+++GF+    V  AL++MY K G+++ A ++F+ M +++VISWT +
Sbjct: 232 PVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVM 291

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
           I G A++G  +EA   F  M+  G  P+     SIL+A A    LE+ ++VH+  + +G 
Sbjct: 292 IGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGL 351

Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
              L V N+LV +YAK G I+DA  VFD M  RD+ +WT +I G AQ+G+G+EA   + Q
Sbjct: 352 ALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQ 411

Query: 529 MLARGTKPDYITFVGLLFACSHAGLAENARW------YFESMDKVYGIKPGPDHYACMID 582
           M   G  P+  T++ +L A + A  +    W      + E    +  ++ G      +I 
Sbjct: 412 MQRNGCLPNLTTYLSILNASAIASTSA-LEWVKVVHKHAEEAGFISDLRIGN----ALIH 466

Query: 583 LLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           +  + G + +A+ + D M  + D   W A++     +G    G  A     +++    +P
Sbjct: 467 MYAKCGSIDDARLVFDGMC-DRDVISWNAMMGGLAQNG---CGHEAFTVFLQMQQEGLVP 522

Query: 643 ----YVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
               Y+ L N + +    E    V K     G+
Sbjct: 523 DSTTYLSLLNTHGSTDALEWVNEVHKHAVETGL 555



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 148/517 (28%), Positives = 234/517 (45%), Gaps = 38/517 (7%)

Query: 6   FKILNFSLRCRSKIIGPARYTHNVGNSVKPASDLN--RALVD-FSNSGEIDEAGQLFEKM 62
             ILN S    +  +   +  H         SDL    AL+  ++  G ID+A  +F+ M
Sbjct: 425 LSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGM 484

Query: 63  SDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFW 122
            DRD  +WN M+   A +G                         G+       EAF +F 
Sbjct: 485 CDRDVISWNAMMGGLAQNG------------------------CGH-------EAFTVFL 513

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           QMQ EG  P   T  ++L        L+   + H +A++T    +  V +  + MY +C 
Sbjct: 514 QMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCG 573

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            I +A  LF      ++   W  MI G +Q   G +A+  F  M+ EG   +  TF +IL
Sbjct: 574 SIDDARLLFDKLSV-RHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINIL 632

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           +A     A ++  +VH     +G   ++ V +AL+  Y+KCG++  A+++ +     N  
Sbjct: 633 SANVDEEALEWVKEVHSHATDAGL-VDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVT 691

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           +W  MI G A+ G   +A S F +M    I  D  TY S+L+  AS   L   K VH+  
Sbjct: 692 TWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHA 751

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           V  G      V NAL+ MYAK G++D A  VF+ M ++DV SWT +I G A HG   EAL
Sbjct: 752 VSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEAL 811

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLV 481
            +F  M+  G  P+     ++L+AC+   +++ G++      +  G   ++     +V +
Sbjct: 812 DFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDL 871

Query: 482 YAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNG 517
             + G + +A     +M    D   W AL+  C   G
Sbjct: 872 LGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYG 908



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 178/347 (51%), Gaps = 13/347 (3%)

Query: 302 VSWNSMIVGFARQGFH----KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
           V  N+ + G A Q  +    K+A+++ K    + I ID F+Y ++L       D+  AK 
Sbjct: 80  VCANASVDGAAEQTHNVITAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQ 139

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           VH  I+K+G E   +V N L+ +Y + G L CA  VF+ +  K++  WT++I G A +G 
Sbjct: 140 VHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGH 199

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
            E+A++ +  MR     P+ +   SIL AC     L++G+++HA  ++SG  S + V+ +
Sbjct: 200 AEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETA 259

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
           LV +Y KCG I DA  +FD M  R+VI+WT +I G A  G+G+EA   + QM   G  P+
Sbjct: 260 LVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPN 319

Query: 538 YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA--CMIDLLGRSGKLIEAKA 595
             T+V +L A + AG  E   W  E            D      ++ +  +SG + +A+ 
Sbjct: 320 SYTYVSILNANASAGALE---WVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARV 376

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           + D M  E D   W  ++     HG    G+ A +   +++    +P
Sbjct: 377 VFDGMT-ERDIFSWTVMIGGLAQHGR---GQEAFSLFLQMQRNGCLP 419



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 174/376 (46%), Gaps = 39/376 (10%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMI--AAYANSGRLREAKKLFNETPFKNFFTWSSLIYG 107
           G ID+A  LF+K+S R   TWN MI  AA    GR                         
Sbjct: 573 GSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGR------------------------- 607

Query: 108 YSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLN 167
                   EA  LF QMQ EG+ P   T  N+L     +  L+  ++ H +A      ++
Sbjct: 608 --------EALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGL-VD 658

Query: 168 AFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR 227
             V   LV  Y+KC  +  A+ +F    + +N   WT MI G +Q+G G  A   F  M 
Sbjct: 659 LRVGNALVHTYSKCGNVKYAKQVFDDMVE-RNVTTWTMMIGGLAQHGCGHDAFSHFLQML 717

Query: 228 VEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLD 287
            EG+  +  T+ SIL+ACA+  A ++  +VH   +S+G  +++ V +AL+ MYAKCG +D
Sbjct: 718 REGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSID 777

Query: 288 SARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CF 346
            AR + +     +  SW  MI G A+ G   EAL  F KM +   K + ++Y +VL  C 
Sbjct: 778 DARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACS 837

Query: 347 ASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA-FMVFNLMQDKDVISW 405
            + +     +   S+    G E        ++D+  + G L+ A   + N+  + D   W
Sbjct: 838 HAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPW 897

Query: 406 TSLITGCAYHGSYEEA 421
            +L+  C  +G+ E A
Sbjct: 898 GALLGACVTYGNLEMA 913


>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  577 bits (1486), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 304/761 (39%), Positives = 458/761 (60%), Gaps = 10/761 (1%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK-NFFTWSSLIYGYSNYGLDI 115
           +L +   + D    NT+I+ Y+  G    A+ +F     K +  +WS+++  ++N  ++ 
Sbjct: 51  KLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEW 110

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG-- 173
           +A   F  M   G+ P++Y    V+R CS       GE  +G+ +KT + L A V  G  
Sbjct: 111 QAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGY-LEADVCVGCE 169

Query: 174 LVDMYAKCKCIFEAEY-LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
           L+DM+ K      + Y +F   P+ +N V WT MIT ++Q G    AI+ F DM + G  
Sbjct: 170 LIDMFVKGSGDLGSAYKVFDKMPE-RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYV 228

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC---GDLDSA 289
            ++FT+ S+L+AC  +     G Q+H  ++  G   +V V  +L+DMYAKC   G +D +
Sbjct: 229 PDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDS 288

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQG-FHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
           R++ E     N +SW ++I  + + G   KEA+ LF KM +  I+ + F++ SVL    +
Sbjct: 289 RKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGN 348

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
             D    + V+S  VK G      V N+LI MYA+ G ++ A   F+++ +K+++S+ ++
Sbjct: 349 LSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAI 408

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
           + G A +   EEA   F+++  +GI       +S+LS  A +  +  G+Q+H   LK G 
Sbjct: 409 VDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGY 468

Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
            S+  + N+L+ +Y++CG I  A +VF+ M  R+VI+WT++I G A++G    AL+ + +
Sbjct: 469 KSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHK 528

Query: 529 MLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSG 588
           ML  GTKP+ IT+V +L ACSH G+    + +F SM K +GI P  +HYACM+DLLGRSG
Sbjct: 529 MLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSG 588

Query: 589 KLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSN 648
            L+EA   ++ M    DA VW+ LL ACRVHG+ ELG  AA  + E EP +   Y+ LSN
Sbjct: 589 LLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSN 648

Query: 649 MYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDE 708
           ++++AG+W+D  ++RK MK R + KE GCSW+E  ++VH F   +  HP    IY ++D+
Sbjct: 649 LHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQ 708

Query: 709 IMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRV 768
           +   IKE GY+PD +F LH++EEE KE  L  HSEK+AVAFGL++  Q  PIRIFKNLRV
Sbjct: 709 LASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRV 768

Query: 769 CGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           CGDCHTA+KYIS    R I++RDSNRFHH K G CSC DYW
Sbjct: 769 CGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 809



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 154/495 (31%), Positives = 256/495 (51%), Gaps = 40/495 (8%)

Query: 49  SGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY 108
           SG++  A ++F+KM +R+  TW  MI  +A  G  R+A                      
Sbjct: 178 SGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDA---------------------- 215

Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA 168
                     +LF  M+L GY P ++T  +VL  C+  GLL  G+Q H   I+    L+ 
Sbjct: 216 ---------IDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDV 266

Query: 169 FVVTGLVDMYAKCKC---IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFK-AIECFR 224
            V   LVDMYAKC     + ++  +F+  P+  N ++WT +IT Y Q+G   K AIE F 
Sbjct: 267 CVGCSLVDMYAKCAADGSVDDSRKVFEQMPE-HNVMSWTAIITAYVQSGECDKEAIELFC 325

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
            M    +  N F+F S+L AC  +S    G QV+   +  G  +   V ++LI MYA+ G
Sbjct: 326 KMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSG 385

Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
            ++ AR+  +     N VS+N+++ G+A+    +EA  LF ++    I I  FT+ S+L+
Sbjct: 386 RMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLS 445

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
             AS   +   + +H  ++K G++  + + NALI MY++ GN++ AF VFN M+D++VIS
Sbjct: 446 GAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVIS 505

Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ-VHAVF 463
           WTS+ITG A HG    AL+ F  M  +G  P+ +   ++LSAC+ + ++  GQ+  ++++
Sbjct: 506 WTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMY 565

Query: 464 LKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMGCAQNGKGKEA 522
            + G    +     +V +  + G + +A    +SM    D + W  L+  C  +G  +  
Sbjct: 566 KEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELG 625

Query: 523 LQFYDQMLARGTKPD 537
               + +L +  +PD
Sbjct: 626 RHAAEMILEQ--EPD 638



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 147/516 (28%), Positives = 260/516 (50%), Gaps = 20/516 (3%)

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
           AF     M  +   P   T   +L+ C      Q G+  H   +++  +L++ V+  L+ 
Sbjct: 10  AFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 69

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           +Y+KC     A  +F+   + ++ V+W+ M++ ++ N   ++AI  F DM   G   N++
Sbjct: 70  LYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEY 129

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGF-EANVYVQSALIDMYAK-CGDLDSARRLLE 294
            F +++ AC+  +    G  ++G ++ +G+ EA+V V   LIDM+ K  GDL SA ++ +
Sbjct: 130 CFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFD 189

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
                N V+W  MI  FA+ G  ++A+ LF  M       D FTY SVL+       L  
Sbjct: 190 KMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLAL 249

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAK---QGNLDCAFMVFNLMQDKDVISWTSLITG 411
            K +HS +++ G      V  +L+DMYAK    G++D +  VF  M + +V+SWT++IT 
Sbjct: 250 GKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITA 309

Query: 412 CAYHGSYE-EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
               G  + EA++ F  M    I P+H   SS+L AC  L+    G+QV++  +K G  S
Sbjct: 310 YVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIAS 369

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
              V NSL+ +YA+ G + DA + FD +  ++++++ A++ G A+N K +EA   ++++ 
Sbjct: 370 VNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIA 429

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPGPDHYAC----MIDLL 584
             G      TF  LL   +  G            ++++G  +K G     C    +I + 
Sbjct: 430 DTGIGISAFTFASLLSGAASIGAMGKG-------EQIHGRLLKGGYKSNQCICNALISMY 482

Query: 585 GRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
            R G +  A  + ++M  + +   W ++++    HG
Sbjct: 483 SRCGNIEAAFQVFNEM-EDRNVISWTSMITGFAKHG 517



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 211/436 (48%), Gaps = 39/436 (8%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS 109
           G +D++ ++FE+M + +  +W  +I AY  SG                            
Sbjct: 283 GSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGE--------------------------- 315

Query: 110 NYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAF 169
               D EA ELF +M     RP+ ++  +VL+ C        GEQ + YA+K        
Sbjct: 316 ---CDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNC 372

Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
           V   L+ MYA+   + +A   F +  + KN V++  ++ GY++N    +A   F ++   
Sbjct: 373 VGNSLISMYARSGRMEDARKAFDILFE-KNLVSYNAIVDGYAKNLKSEEAFLLFNEIADT 431

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
           G+  + FTF S+L+  A++ A   G Q+HG +L  G+++N  + +ALI MY++CG++++A
Sbjct: 432 GIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAA 491

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFAS 348
            ++    E  N +SW SMI GFA+ GF   AL +F KM     K ++ TY +VL+ C   
Sbjct: 492 FQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHV 551

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTS 407
            +     K  +S+  + G          ++D+  + G L  A    N M    D + W +
Sbjct: 552 GMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRT 611

Query: 408 LITGCAYHGSYEEALKYFSDMRISGICPD---HVVVSSILSACAELT-VLEFGQQVHAV- 462
           L+  C  HG+ E   ++ ++M +     D   ++++S++ ++  +   V++  + +    
Sbjct: 612 LLGACRVHGNTELG-RHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERN 670

Query: 463 FLKSGGCSSLSVDNSL 478
            +K  GCS + V+N +
Sbjct: 671 LIKEAGCSWIEVENRV 686



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 115/229 (50%), Gaps = 33/229 (14%)

Query: 21  GPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           G   Y++ V   +   + +  +L+  ++ SG +++A + F+ + +++  ++N ++  YA 
Sbjct: 355 GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAK 414

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
           + +  EA  LFNE                ++ G+ I AF                T  ++
Sbjct: 415 NLKSEEAFLLFNEI---------------ADTGIGISAF----------------TFASL 443

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKN 199
           L   +  G + +GEQ HG  +K  +  N  +   L+ MY++C  I  A  +F    D +N
Sbjct: 444 LSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMED-RN 502

Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
            ++WT+MITG++++G+  +A+E F  M   G + N+ T+ ++L+AC+ V
Sbjct: 503 VISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHV 551



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 35/163 (21%), Positives = 64/163 (39%), Gaps = 32/163 (19%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +S  G I+ A Q+F +M DR+  +W +MI                               
Sbjct: 482 YSRCGNIEAAFQVFNEMEDRNVISWTSMIT------------------------------ 511

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ-FHGYAIKTCF 164
            G++ +G    A E+F +M   G +P++ T   VL  CS  G++  G++ F+    +   
Sbjct: 512 -GFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGI 570

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
                    +VD+  +   + EA       P   + + W T++
Sbjct: 571 VPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 613


>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  577 bits (1486), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 308/764 (40%), Positives = 454/764 (59%), Gaps = 10/764 (1%)

Query: 55  AGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF----KNFFTWSSLIYGYS- 109
           A +L    S+ D  +W+ +I+ Y  +GR  EA   + E        N FT+SS++ G S 
Sbjct: 101 ARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSL 160

Query: 110 ----NYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                 G  I    L  +M   G  P++++L  VL  C+       G + HGY IK  +D
Sbjct: 161 TRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYD 220

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            + F    L+DMYAK  C   A  +F   P   + V+W  +I G   +     A++    
Sbjct: 221 SDPFSANALLDMYAKSGCPEAAIAVFYEIPK-PDIVSWNAVIAGCVLHEKNDLALKLLGK 279

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M    V  + FT  S L ACAA+     G Q+H  ++    E + +V   LIDMY+KCG 
Sbjct: 280 MGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGL 339

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           L  AR + +     + + WNS+I G++  G+  EA+SLF  M+   ++ +  T  ++L  
Sbjct: 340 LQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKS 399

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
            A +      + VH++ +K+G++   +V N+L+D Y K   L+ A  VF +   +D++++
Sbjct: 400 TAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAY 459

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
           TS+IT  + +G  EEALK +  M+   I PD  + SS+ +ACA L+  E G+Q+H   LK
Sbjct: 460 TSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLK 519

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
            G  S +   NSLV +YAKCG I+DA+ +F+ +  R +++W+A+I G AQ+G G++ALQ 
Sbjct: 520 CGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQL 579

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
           + QML  G  P++IT V +L AC+HAGL   AR +F  M+K++GI P  +HYACM+D+LG
Sbjct: 580 FYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILG 639

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ 645
           R G+L EA  L+ +M  +  A VW ALL A R+H ++ELG  AA  L  LEP  +  ++ 
Sbjct: 640 RVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHIL 699

Query: 646 LSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSK 705
           L+N+Y++ G W++ A+VR+ MK+  ++KEPG SW+E   +V+ FI  DR HP   +IY K
Sbjct: 700 LANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVK 759

Query: 706 IDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKN 765
           +D++   +  AGYVP +   LH+VE+  KE  L +HSEKLAVAFGL+  P GAPIR+ KN
Sbjct: 760 LDDLRERLTSAGYVPMIETDLHDVEQIEKEQLLWHHSEKLAVAFGLIATPPGAPIRVKKN 819

Query: 766 LRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           LRVC DCHTA K+IS V  R II+RD NRFHHF+ G+CSCGDYW
Sbjct: 820 LRVCIDCHTAFKFISKVASREIIVRDINRFHHFRDGSCSCGDYW 863



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 130/508 (25%), Positives = 217/508 (42%), Gaps = 77/508 (15%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           +P +L    A      G  +H  I+       + +++ L+++Y+KC     AR+L+  S 
Sbjct: 53  YPKLLLQFTASKDVSSGMAIHARIIRL---GLLGLRNRLVNLYSKCQCFRVARKLVIDSS 109

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPS---------------- 341
             + VSW+++I G+ + G  +EAL  + +M+    K ++FT+ S                
Sbjct: 110 EPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQ 169

Query: 342 ------------------------VLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
                                   VLN  A   D N    VH  ++K G++   F  NAL
Sbjct: 170 IHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANAL 229

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           +DMYAK G  + A  VF  +   D++SW ++I GC  H   + ALK    M    + P  
Sbjct: 230 LDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSM 289

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
             +SS L ACA + +++ G+Q+H+  +K        V   L+ +Y+KCG + DA  VFD 
Sbjct: 290 FTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDL 349

Query: 498 MHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA---GLA 554
           M  +DVI W ++I G +  G   EA+  +  M   G + +  T   +L + + +   G  
Sbjct: 350 MPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFC 409

Query: 555 ENARW-------------------------YFESMDKVYGIKPGPD--HYACMIDLLGRS 587
           E                               E   KV+ + P  D   Y  MI    + 
Sbjct: 410 EQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQY 469

Query: 588 GKLIEAKALLDQMVG---EPDATVWKALLSACRVHGDLELGERAANNLFELEPM-NAMPY 643
           G   EA  +  +M     +PDA ++ +L +AC      E G++   ++ +   + +    
Sbjct: 470 GLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAG 529

Query: 644 VQLSNMYSTAGKWEDAARVRKLMKSRGI 671
             L NMY+  G  +DA+ +   +  RGI
Sbjct: 530 NSLVNMYAKCGSIDDASCIFNEISWRGI 557



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 112/266 (42%), Gaps = 39/266 (14%)

Query: 52  IDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNY 111
           +++A ++FE     D   + +MI A                               YS Y
Sbjct: 441 LEDAAKVFEVCPAEDLVAYTSMITA-------------------------------YSQY 469

Query: 112 GLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV 171
           GL  EA +++ +MQ    +P  +   ++   C+     ++G+Q H + +K     + F  
Sbjct: 470 GLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAG 529

Query: 172 TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV 231
             LV+MYAKC  I +A  +F      +  V+W+ MI G +Q+G+G KA++ F  M   G+
Sbjct: 530 NSLVNMYAKCGSIDDASCIFNEI-SWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGI 588

Query: 232 ESNQFTFPSILTAC----AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLD 287
             N  T  S+L+AC        AR F   +       G        + ++D+  + G LD
Sbjct: 589 LPNHITLVSVLSACNHAGLVTEARRFFGLMEKLF---GITPTQEHYACMVDILGRVGRLD 645

Query: 288 SARRLLEYSEIDNEVSWNSMIVGFAR 313
            A  L++        +    ++G AR
Sbjct: 646 EAMVLVKEMPFQASAAVWGALLGAAR 671



 Score = 46.2 bits (108), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 64/169 (37%), Gaps = 44/169 (26%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++  G ID+A  +F ++S R   +W+ MI   A  G  R                     
Sbjct: 536 YAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGR--------------------- 574

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                     +A +LF+QM   G  P+  TL +VL  C+  GL+    +F G   K    
Sbjct: 575 ----------KALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKL--- 621

Query: 166 LNAFVVTG-------LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
              F +T        +VD+  +   + EA  L K  P   +   W  ++
Sbjct: 622 ---FGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALL 667


>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 703

 Score =  577 bits (1486), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 297/694 (42%), Positives = 416/694 (59%), Gaps = 1/694 (0%)

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  +       G     +    VL+ C  +  L   +Q H   IK+  + NA V+  L+
Sbjct: 11  EAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLL 70

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
            +Y +C  + EA  +F      K+  +W  MI GY ++ +   A+  FR+M  EGV+ N 
Sbjct: 71  HVYIECGRLQEARCVFDALVK-KSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNA 129

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            T+  IL ACA++SA  +G +VH CI   G E++V V +AL+ MY KCG ++ ARR+ + 
Sbjct: 130 GTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDN 189

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               + +SW  MI  +A+ G  KEA  L  +M     K +  TY S+LN  AS   L   
Sbjct: 190 LMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWV 249

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           K VH   +  G E    V  AL+ MYAK G++D A +VF+ M+ +DV+SW  +I   A H
Sbjct: 250 KRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEH 309

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G   EA   F  M+  G  PD ++  SIL+ACA    LE+ +++H   L SG    + V 
Sbjct: 310 GRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVG 369

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
            +LV +Y+K G I+DA  VFD M  R+V++W A+I G AQ+G G++AL+ + +M A G K
Sbjct: 370 TALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVK 429

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           PD +TFV +L ACSHAGL +  R  + +M +VYGI+P   H  CM+DLLGR+G+L+EAK 
Sbjct: 430 PDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKL 489

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
            +D M  +PD   W ALL +CR +G++ELGE  A    +L+P NA  YV LSN+Y+ AGK
Sbjct: 490 FIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGK 549

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
           W+  + VR +M+ RGIRKEPG SW+E ++++H F+  D  HP   +I    D+++  IK 
Sbjct: 550 WDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIEKIKA 609

Query: 716 AGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
            GY+PD    L N   + KE+ +  HSEKLA+ +GL+  P G PIR+FKNLRVC DCH A
Sbjct: 610 EGYIPDTRLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVFKNLRVCTDCHGA 669

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            K IS V  R II+RD+NRFHHFK G CSCGDYW
Sbjct: 670 TKLISKVEGREIIVRDANRFHHFKDGVCSCGDYW 703



 Score =  248 bits (634), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 163/515 (31%), Positives = 263/515 (51%), Gaps = 9/515 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           +++    N ++  Y   GRL+EA+ +F+    K+  +W+++I GY  +    +A  LF +
Sbjct: 60  EQNAHVMNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFRE 119

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M  EG +P+  T   +L+ C+    L+ G++ H        + +  V T L+ MY KC  
Sbjct: 120 MCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGS 179

Query: 184 IFEAEYLFKMFPDGKNH--VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
           I EA    ++F +  NH  ++WT MI  Y+Q+G G +A      M  EG + N  T+ SI
Sbjct: 180 INEAR---RIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSI 236

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           L ACA+  A  +  +VH   L +G E +V V +AL+ MYAK G +D AR + +  ++ + 
Sbjct: 237 LNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDV 296

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           VSWN MI  FA  G   EA  LF +M     K D   + S+LN  AS   L   K +H  
Sbjct: 297 VSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRH 356

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
            + +G E    V  AL+ MY+K G++D A +VF+ M+ ++V+SW ++I+G A HG  ++A
Sbjct: 357 ALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDA 416

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVL 480
           L+ F  M   G+ PD V   ++LSAC+   +++ G+  +    +  G    +S  N +V 
Sbjct: 417 LEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVD 476

Query: 481 VYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
           +  + G + +A    D+M    D  TW AL+  C   G  +       + L    K +  
Sbjct: 477 LLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPK-NAA 535

Query: 540 TFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
           T+V L    + AG  +   W   +M +  GI+  P
Sbjct: 536 TYVLLSNIYAEAGKWDMVSW-VRTMMRERGIRKEP 569



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 194/376 (51%), Gaps = 34/376 (9%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +   G I+EA ++F+ + + D  +W  MI AYA SG  +                     
Sbjct: 174 YGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGK--------------------- 212

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                     EA+ L  QM+ EG++P+  T  ++L  C+ +G L+  ++ H +A+    +
Sbjct: 213 ----------EAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLE 262

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
           L+  V T LV MYAK   I +A  +F      ++ V+W  MI  ++++G G +A + F  
Sbjct: 263 LDVRVGTALVQMYAKSGSIDDARVVFDRMK-VRDVVSWNVMIGAFAEHGRGHEAYDLFLQ 321

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M+ EG + +   F SIL ACA+  A ++  ++H   L SG E +V V +AL+ MY+K G 
Sbjct: 322 MQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGS 381

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           +D AR + +  ++ N VSWN+MI G A+ G  ++AL +F++M A  +K D  T+ +VL+ 
Sbjct: 382 IDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSA 441

Query: 346 FASNIDLNNAKSVHSLIVKT-GFEGYKFVNNALIDMYAKQGNL-DCAFMVFNLMQDKDVI 403
            +    ++  +S +  + +  G E      N ++D+  + G L +    + N+  D D  
Sbjct: 442 CSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEA 501

Query: 404 SWTSLITGCAYHGSYE 419
           +W +L+  C  +G+ E
Sbjct: 502 TWGALLGSCRTYGNVE 517



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 75/186 (40%), Gaps = 35/186 (18%)

Query: 25  YTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRL 83
           + H + + ++    +  ALV  +S SG ID+A  +F++M  R+  +WN MI+        
Sbjct: 354 HRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMIS-------- 405

Query: 84  REAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLC 143
                                  G + +GL  +A E+F +M   G +P + T   VL  C
Sbjct: 406 -----------------------GLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSAC 442

Query: 144 SLKGLLQRGEQFHGYAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHV 201
           S  GL+  G   +  A+   + +   V     +VD+  +   + EA+          +  
Sbjct: 443 SHAGLVDEGRSQY-LAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEA 501

Query: 202 AWTTMI 207
            W  ++
Sbjct: 502 TWGALL 507


>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  576 bits (1484), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 309/747 (41%), Positives = 452/747 (60%), Gaps = 4/747 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPF-KNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           D F  N ++A Y   G + EA+++F+E    +N  +W+ ++  +       +A ELF +M
Sbjct: 134 DIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEM 193

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
              G RP+++    V+  C+    L+ G + H   ++T +D + F    LVDMY+K   I
Sbjct: 194 VWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDI 253

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
             A  +F   P   + V+W   I+G   +G+   A+E    M+  G+  N FT  SIL A
Sbjct: 254 HMAALVFGKVPK-TDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKA 312

Query: 245 CAAVSARDFGA--QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           CA   A  F    Q+HG ++ +  +++ Y+  AL+DMYAK G LD AR++ E+    + +
Sbjct: 313 CAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLL 372

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
            WN++I G +  G H E+LSLF +M      I+  T  +VL   AS   +++   VH+L 
Sbjct: 373 LWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALA 432

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
            K GF     V N LID Y K   L  A  VF      ++I++TS+IT  +     E+A+
Sbjct: 433 EKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAI 492

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
           K F +M   G+ PD  V+SS+L+ACA L+  E G+QVHA  +K    + +   N+LV  Y
Sbjct: 493 KLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTY 552

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
           AKCG I DA+  F  +  + V++W+A+I G AQ+G GK AL  + +M+     P++IT  
Sbjct: 553 AKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLT 612

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
            +L AC+HAGL + A+ YF SM +++GI    +HY+CMIDLLGR+GKL +A  L++ M  
Sbjct: 613 SVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPF 672

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
           E +A VW ALL+A RVH D ELG+ AA  LF LEP  +  +V L+N Y++AG W++ A+V
Sbjct: 673 EANAAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKV 732

Query: 663 RKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDM 722
           RKLMK   ++KEP  SWVE   +VH FI  D+ HP   DIY+K++E+  L+ +AGYVP++
Sbjct: 733 RKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRARDIYAKLEELGDLMSKAGYVPNL 792

Query: 723 NFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAV 782
              LH+V++  KE+ L++HSE+LAVAF L++ P GAPIR+ KNLR+C DCH A K+IS +
Sbjct: 793 EVDLHDVDKSEKELLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHVAFKFISKI 852

Query: 783 YLRHIILRDSNRFHHFKAGNCSCGDYW 809
             R II+RD NRFHHF  G CSCGDYW
Sbjct: 853 VSREIIIRDINRFHHFSDGACSCGDYW 879



 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 182/626 (29%), Positives = 301/626 (48%), Gaps = 40/626 (6%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +++ Y+       A+++F+ETP     +WSSL+  YSN  L  EA   F  M+  G R
Sbjct: 41  NHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVR 100

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            +++ L  VL+     GL   G Q H  A+ T    + FV   LV MY     + EA  +
Sbjct: 101 CNEFALPIVLKCAPDAGL---GVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRV 157

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F      +N V+W  M++ + +N     A+E F +M   GV  N+F F  ++ AC     
Sbjct: 158 FDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRD 217

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            + G +VH  ++ +G++ +V+  +AL+DMY+K GD+  A  +       + VSWN+ I G
Sbjct: 218 LEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISG 277

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN--CFASNIDLNNAKSVHSLIVKTGFE 368
               G  + AL L  +M +  +  + FT  S+L     A        + +H  ++K   +
Sbjct: 278 CVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACAD 337

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
              ++  AL+DMYAK G LD A  VF  +  KD++ W +LI+GC++ G + E+L  F  M
Sbjct: 338 SDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRM 397

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
           R  G   +   ++++L + A L  +    QVHA+  K G  S   V N L+  Y KC C+
Sbjct: 398 RKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCL 457

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
             AN+VF+   + ++I +T++I   +Q   G++A++ + +ML +G +PD      LL AC
Sbjct: 458 RYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNAC 517

Query: 549 S-----------HAGL----------AENARWY-------FESMDKVYGIKP--GPDHYA 578
           +           HA L          A NA  Y        E  D  +   P  G   ++
Sbjct: 518 ASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWS 577

Query: 579 CMIDLLGRSGKLIEAKALLDQMVGE---PDATVWKALLSACRVHGDLELGERAANNLFEL 635
            MI  L + G    A  +  +MV E   P+     ++L AC   G ++  +   +++ E+
Sbjct: 578 AMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEM 637

Query: 636 EPMNAMP--YVQLSNMYSTAGKWEDA 659
             ++     Y  + ++   AGK +DA
Sbjct: 638 FGIDRTEEHYSCMIDLLGRAGKLDDA 663



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 141/466 (30%), Positives = 238/466 (51%), Gaps = 10/466 (2%)

Query: 54  EAGQLFEKMS-----DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY 108
           EAG+    M      D+D FT N ++  Y+  G +  A  +F + P  +  +W++ I G 
Sbjct: 219 EAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGC 278

Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLR--LCSLKGLLQRGEQFHGYAIKTCFDL 166
             +G D  A EL  QM+  G  P+ +TL ++L+    +  G    G Q HG+ IK C D 
Sbjct: 279 VLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADS 338

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
           + ++   LVDMYAK   + +A  +F+  P  K+ + W  +I+G S  G   +++  F  M
Sbjct: 339 DDYIGVALVDMYAKYGLLDDARKVFEWIPR-KDLLLWNALISGCSHGGCHGESLSLFCRM 397

Query: 227 RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDL 286
           R EG + N+ T  ++L + A++ A     QVH      GF ++ +V + LID Y KC  L
Sbjct: 398 RKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCL 457

Query: 287 DSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCF 346
             A ++ E    DN +++ SMI   ++    ++A+ LF +M  + ++ D F   S+LN  
Sbjct: 458 RYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNAC 517

Query: 347 ASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWT 406
           AS       K VH+ ++K  F    F  NAL+  YAK G+++ A + F+ + DK V+SW+
Sbjct: 518 ASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWS 577

Query: 407 SLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
           ++I G A HG  + AL  F  M    I P+H+ ++S+L AC    +++  +   +   + 
Sbjct: 578 AMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEM 637

Query: 467 GGCSSLSVDNS-LVLVYAKCGCINDANRVFDSMH-TRDVITWTALI 510
            G        S ++ +  + G ++DA  + +SM    +   W AL+
Sbjct: 638 FGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALL 683



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/369 (32%), Positives = 194/369 (52%), Gaps = 9/369 (2%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G + +  +D D +    ++  YA  G L +A+K+F   P K+   W++LI G S+ G   
Sbjct: 329 GFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHG 388

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           E+  LF +M+ EG   ++ TL  VL+  +    +    Q H  A K  F  ++ VV GL+
Sbjct: 389 ESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLI 448

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           D Y KC C+  A  +F+      N +A+T+MIT  SQ  +G  AI+ F +M  +G+E + 
Sbjct: 449 DSYWKCNCLRYANKVFEEH-SSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDP 507

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
           F   S+L ACA++SA + G QVH  ++   F  +V+  +AL+  YAKCG ++ A   L +
Sbjct: 508 FVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDAD--LAF 565

Query: 296 SEIDNE--VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL- 352
           S + ++  VSW++MI G A+ G  K AL +F++M    I  +  T  SVL C  ++  L 
Sbjct: 566 SGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVL-CACNHAGLV 624

Query: 353 NNAKSVHSLIVKT-GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLIT 410
           + AK   S + +  G +  +   + +ID+  + G LD A  + N M  + +   W +L+ 
Sbjct: 625 DEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLA 684

Query: 411 GCAYHGSYE 419
               H   E
Sbjct: 685 ASRVHRDPE 693



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 196/391 (50%), Gaps = 19/391 (4%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           +   +LT  AA  +   GA +H  +L SG       ++ L+  Y+KC    SARR+ + +
Sbjct: 6   SISPLLTRYAATQSLFLGAHIHAHLLKSGLLHA--FRNHLLSFYSKCRLPGSARRVFDET 63

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
                VSW+S++  ++     +EAL+ F+ M AR ++ ++F  P VL C     D     
Sbjct: 64  PDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAP---DAGLGV 120

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN-LMQDKDVISWTSLITGCAYH 415
            VH++ V TG  G  FV NAL+ MY   G +D A  VF+   +D++ +SW  +++    +
Sbjct: 121 QVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKN 180

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
               +A++ F +M  SG+ P+    S +++AC     LE G++VHA+ +++G    +   
Sbjct: 181 DRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTA 240

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           N+LV +Y+K G I+ A  VF  +   DV++W A I GC  +G  + AL+   QM + G  
Sbjct: 241 NALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLV 300

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPGPDH----YACMIDLLGRSGK 589
           P+  T   +L        A      F    +++G  IK   D        ++D+  + G 
Sbjct: 301 PNVFTLSSIL-----KACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGL 355

Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHG 620
           L +A+ +  + +   D  +W AL+S C  HG
Sbjct: 356 LDDARKVF-EWIPRKDLLLWNALISGCS-HG 384


>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
 gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
          Length = 878

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 285/741 (38%), Positives = 445/741 (60%), Gaps = 7/741 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
            +++  Y     + + +K+F   P +N  TW+SL+ GY   G   +  ELF++M+ EG  
Sbjct: 143 TSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVW 202

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+  T  +VL + + +G++  G + H  ++K       FV   L++MYAKC  + EA  +
Sbjct: 203 PNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVV 262

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F    + ++ V+W T++ G   NG+  +A++ F D R       Q T+ +++  CA +  
Sbjct: 263 FCGM-ETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQ 321

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL-LEYSEIDNEVSWNSMIV 309
                Q+H  +L  GF +   V +AL+D Y+K G L +A  + L  S   N VSW +MI 
Sbjct: 322 LGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMIN 381

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           G  + G    A +LF +M    +  +DFTY ++L    +++       +H+ ++KT +E 
Sbjct: 382 GCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVASL----PPQIHAQVIKTNYEC 437

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
              V  AL+  Y+K  N + A  +F ++  KDV+SW++++T  A  G  + A   F  M 
Sbjct: 438 TSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMT 497

Query: 430 ISGICPDHVVVSSILSACAELTV-LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
           + G+ P+   +SS++ ACA  T  ++ G+Q HA+ +K     +L V ++LV +YA+ G I
Sbjct: 498 MHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSI 557

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
             A  +F+    RD+++W +++ G AQ+G  ++AL  + QM A G + D +TF+ ++  C
Sbjct: 558 ESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGC 617

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           +HAGL E  + YF+SM + YGI P  +HYACM+DL  R+GKL EA +L++ M       V
Sbjct: 618 AHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMV 677

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           W+ LL AC+VH ++ELG+ AA  L  LEP ++  YV LSN+YS AGKW++   VRKLM +
Sbjct: 678 WRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDT 737

Query: 669 RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHN 728
           + ++KE GCSW++  ++VH FI+ D+ HPL   IY+K+  +   +K+ GY PD +FALH 
Sbjct: 738 KKVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAMTTKLKQEGYCPDTSFALHE 797

Query: 729 VEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHII 788
           V EE KE  LA HSE+LA+AFGL+  P GAP+ IFKNLRVCGDCHT +K +S +  R I+
Sbjct: 798 VAEEQKEAMLAMHSERLALAFGLIATPPGAPLHIFKNLRVCGDCHTVIKMVSKIEDREIV 857

Query: 789 LRDSNRFHHFKAGNCSCGDYW 809
           +RD +RFHHF +G CSCGD+W
Sbjct: 858 MRDCSRFHHFNSGVCSCGDFW 878



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 162/539 (30%), Positives = 269/539 (49%), Gaps = 13/539 (2%)

Query: 86  AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQYTLDNVLRLCS 144
           A++ F+E P +N  T    ++ ++  G   +A + F  + +  G R     L  VL++C 
Sbjct: 57  ARQAFDEIPHRN--TLDHALFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCG 114

Query: 145 LKGLLQRGEQFHGYAIKTCFDL-NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAW 203
                  G+Q HG  I+   D  +  V T LVDMY K   + +   +F+  P  +N V W
Sbjct: 115 SVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPK-RNVVTW 173

Query: 204 TTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS 263
           T+++TGY Q+G     +E F  MR EGV  N  TF S+L+  A+    D G +VH   + 
Sbjct: 174 TSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVK 233

Query: 264 SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSL 323
            G  + V+V ++L++MYAKCG ++ AR +    E  + VSWN+++ G    G   EAL L
Sbjct: 234 FGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQL 293

Query: 324 FKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK 383
           F    +    +   TY +V+   A+   L  A+ +HS ++K GF  Y  V  AL+D Y+K
Sbjct: 294 FHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSK 353

Query: 384 QGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
            G L  A  +F LM   ++V+SWT++I GC  +G    A   FS MR  G+ P+    S+
Sbjct: 354 AGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYST 413

Query: 443 ILSACAELTVLEFGQQVHAVFLKSG-GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR 501
           IL+A    +V     Q+HA  +K+   C+S+ V  +L+  Y+K     +A  +F  +  +
Sbjct: 414 ILTA----SVASLPPQIHAQVIKTNYECTSI-VGTALLASYSKLCNTEEALSIFKMIDQK 468

Query: 502 DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYF 561
           DV++W+A++   AQ G    A   + +M   G KP+  T   ++ AC+      +    F
Sbjct: 469 DVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQF 528

Query: 562 ESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
            ++   +         + ++ +  R G +  A+ + ++   + D   W ++LS    HG
Sbjct: 529 HAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQT-DRDLVSWNSMLSGYAQHG 586



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 228/449 (50%), Gaps = 7/449 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N+++  YA  G + EA+ +F     ++  +W++L+ G    G D+EA +LF   +  
Sbjct: 241 FVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSS 300

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
               +Q T   V++LC+    L    Q H   +K  F     V+T L+D Y+K   +  A
Sbjct: 301 ITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNA 360

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F +    +N V+WT MI G  QNG    A   F  MR +GV  N FT+ +ILTA  A
Sbjct: 361 LDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVA 420

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
                   Q+H  ++ + +E    V +AL+  Y+K  + + A  + +  +  + VSW++M
Sbjct: 421 ----SLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAM 476

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTG 366
           +  +A+ G    A ++F KM    +K ++FT  SV++ C +    ++  +  H++ +K  
Sbjct: 477 LTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHR 536

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
                 V++AL+ MYA++G+++ A  +F    D+D++SW S+++G A HG  ++AL  F 
Sbjct: 537 CHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFR 596

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAKC 485
            M   GI  D V   S++  CA   ++E GQ+      +  G + ++     +V +Y++ 
Sbjct: 597 QMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRA 656

Query: 486 GCINDANRVFDSMH-TRDVITWTALIMGC 513
           G +++A  + + M      + W  L+  C
Sbjct: 657 GKLDEAMSLIEGMSFPAGPMVWRTLLGAC 685



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 208/433 (48%), Gaps = 25/433 (5%)

Query: 210 YSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILTACAAVSARDFGAQVHG-CILSSGFE 267
           +++ G   +A++ F D+ R  G          +L  C +V  R  G Q+HG CI      
Sbjct: 77  HARRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCGSVPDRVLGKQLHGLCIRCGHDR 136

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM 327
            +V V ++L+DMY K   +   R++ E     N V+W S++ G+ + G   + + LF +M
Sbjct: 137 GDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRM 196

Query: 328 HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL 387
            A  +  +  T+ SVL+  AS   ++  + VH+  VK G     FV N+L++MYAK G +
Sbjct: 197 RAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLV 256

Query: 388 DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSAC 447
           + A +VF  M+ +D++SW +L+ G   +G   EAL+ F D R S         ++++  C
Sbjct: 257 EEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLC 316

Query: 448 AELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH-TRDVITW 506
           A +  L   +Q+H+  LK G  S  +V  +L+  Y+K G + +A  +F  M  +++V++W
Sbjct: 317 ANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSW 376

Query: 507 TALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDK 566
           TA+I GC QNG    A   + +M   G  P+  T+  +L A               S+  
Sbjct: 377 TAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTA------------SVASLPP 424

Query: 567 VYGIKPGPDHYACM----IDLLGRSGKLIEAKALLD--QMVGEPDATVWKALLSACRVHG 620
               +    +Y C       LL    KL   +  L   +M+ + D   W A+L+     G
Sbjct: 425 QIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAG 484

Query: 621 DLELGERAANNLF 633
           D +     A N+F
Sbjct: 485 DSD----GATNIF 493



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 170/343 (49%), Gaps = 5/343 (1%)

Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH-ARDIKIDDFTYPSVL 343
           D   AR+   + EI +  + +  +   AR+G   +AL  F  +H     ++       VL
Sbjct: 53  DATGARQ--AFDEIPHRNTLDHALFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVGVL 110

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFE-GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV 402
               S  D    K +H L ++ G + G   V  +L+DMY K  ++     VF  M  ++V
Sbjct: 111 KVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNV 170

Query: 403 ISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAV 462
           ++WTSL+TG    G+  + ++ F  MR  G+ P+ V  +S+LS  A   +++ G++VHA 
Sbjct: 171 VTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQ 230

Query: 463 FLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEA 522
            +K G CS++ V NSL+ +YAKCG + +A  VF  M TRD+++W  L+ G   NG   EA
Sbjct: 231 SVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEA 290

Query: 523 LQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMID 582
           LQ +    +  T     T+  ++  C++      AR    S+ K  G     +    ++D
Sbjct: 291 LQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLK-RGFHSYGNVMTALMD 349

Query: 583 LLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELG 625
              ++G+L  A  +   M G  +   W A+++ C  +GD+ L 
Sbjct: 350 AYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLA 392



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 79/177 (44%), Gaps = 45/177 (25%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           ++ ALV  ++  G I+ A  +FE+ +DRD  +WN+M++ YA                   
Sbjct: 543 VSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQ------------------ 584

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF-- 155
                   +GYS   LD+     F QM+ EG      T  +V+  C+  GL++ G+++  
Sbjct: 585 --------HGYSQKALDV-----FRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFD 631

Query: 156 ---HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK--MFPDGKNHVAWTTMI 207
                Y I    +  A     +VD+Y++   + EA  L +   FP G   + W T++
Sbjct: 632 SMARDYGITPTMEHYAC----MVDLYSRAGKLDEAMSLIEGMSFPAGP--MVWRTLL 682


>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
          Length = 890

 Score =  573 bits (1477), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 293/797 (36%), Positives = 455/797 (57%), Gaps = 42/797 (5%)

Query: 54  EAGQLFEKMSDR-----DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY 108
           E G++  K  D      D +  N++I  Y+  G +   +++F     ++  TWSS+I  Y
Sbjct: 95  EDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAY 154

Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA 168
           +      +AF+ F +M+     P++ T  ++L+ C+   +L++  + H     +  + + 
Sbjct: 155 AGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDV 214

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
            V T L+ MY+KC  I  A  +F+   + +N V+WT +I   +Q+    +A E +  M  
Sbjct: 215 AVATALITMYSKCGEISLACEIFQKMKE-RNVVSWTAIIQANAQHRKLNEAFELYEKMLQ 273

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
            G+  N  TF S+L +C    A + G ++H  I   G E +V V +ALI MY KC  +  
Sbjct: 274 AGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQD 333

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFH-KEAL----SLFKKMHARDIKIDDFTYPSVL 343
           AR   +     + +SW++MI G+A+ G+  KE+L     L ++M    +  +  T+ S+L
Sbjct: 334 ARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSIL 393

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVI 403
              + +  L   + +H+ I K GFE  + +  A+ +MYAK G++  A  VF+ M++K+V+
Sbjct: 394 KACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVV 453

Query: 404 SWTSLIT-------------------------------GCAYHGSYEEALKYFSDMRISG 432
           +W SL+T                               G A  G   +  +  S M++ G
Sbjct: 454 AWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEG 513

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
             PD V + SIL AC  L+ LE G+ VHA  +K G  S   V  SL+ +Y+KCG + +A 
Sbjct: 514 FQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEAR 573

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
            VFD +  RD + W A++ G  Q+G G EA+  + +ML     P+ ITF  ++ AC  AG
Sbjct: 574 TVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAG 633

Query: 553 LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
           L +  R  F  M + + +KPG  HY CM+DLLGR+G+L EA+  + +M  EPD +VW AL
Sbjct: 634 LVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHAL 693

Query: 613 LSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIR 672
           L AC+ H +++L E AA+++  LEP NA  YV LSN+Y+ AG+W+D+ +VRK+M  +G++
Sbjct: 694 LGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLK 753

Query: 673 KEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEE 732
           K+ G S +E + ++H F++ED  HP    I+++++ +   +KEAGY PDM F LH+V+E 
Sbjct: 754 KDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPDMRFVLHDVDEV 813

Query: 733 GKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDS 792
            KE  L +HSEKLA+A+GLL  P G PIRI KNLRVCGDCHTA K+IS +  R I+ RD+
Sbjct: 814 QKERALCHHSEKLAIAYGLLKTPPGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDA 873

Query: 793 NRFHHFKAGNCSCGDYW 809
           NRFH+FK G CSCGD+W
Sbjct: 874 NRFHYFKNGTCSCGDFW 890



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 166/601 (27%), Positives = 278/601 (46%), Gaps = 47/601 (7%)

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA +L   ++  G   +  T   ++  C+     + G+  H    +    ++ ++   L+
Sbjct: 61  EAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLI 120

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           + Y+K   +   E +F+     ++ V W++MI  Y+ N +  KA + F  M+   +E N+
Sbjct: 121 NFYSKFGDVASVEQVFRRMTL-RDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNR 179

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            TF SIL AC   S  +   ++H  + +SG E +V V +ALI MY+KCG++  A  + + 
Sbjct: 180 ITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQK 239

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
            +  N VSW ++I   A+     EA  L++KM    I  +  T+ S+LN   +   LN  
Sbjct: 240 MKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRG 299

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           + +HS I + G E    V NALI MY K   +  A   F+ M  +DVISW+++I G A  
Sbjct: 300 RRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQS 359

Query: 416 G-----SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
           G     S +E  +    MR  G+ P+ V   SIL AC+    LE G+Q+HA   K G  S
Sbjct: 360 GYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFES 419

Query: 471 SLSVDNSLVLVYAKCGCI-------------------------------NDANRVFDSMH 499
             S+  ++  +YAKCG I                                 A +VF  M 
Sbjct: 420 DRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMS 479

Query: 500 TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW 559
           TR+V++W  +I G AQ+G   +  +    M   G +PD +T + +L AC      E  + 
Sbjct: 480 TRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKL 539

Query: 560 YFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVH 619
                 K+ G++        +I +  + G++ EA+ + D+ +   D   W A+L+    H
Sbjct: 540 VHAEAVKL-GLESDTVVATSLIGMYSKCGEVTEARTVFDK-ISNRDTVAWNAMLAGYGQH 597

Query: 620 GDLELGERAAN----NLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEP 675
           G   +G  A +     L E  P N + +  + +    AG  ++   + ++M+    R +P
Sbjct: 598 G---IGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQE-DFRMKP 653

Query: 676 G 676
           G
Sbjct: 654 G 654



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 217/444 (48%), Gaps = 52/444 (11%)

Query: 25  YTHNVGNSVKPASDLNRALVDFSNSGE-IDEAGQLFEKMSDR----DGFTWNTMIAAYAN 79
           Y   +   + P +    +L++  N+ E ++   ++   +S+R    D    N +I  Y  
Sbjct: 268 YEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCK 327

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYG------LDIEAFELFWQMQLEGYRPSQ 133
              +++A++ F+    ++  +WS++I GY+  G      LD E F+L  +M+ EG  P++
Sbjct: 328 CNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLD-EVFQLLERMRREGVFPNK 386

Query: 134 YTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF-- 191
            T  ++L+ CS+ G L++G Q H    K  F+ +  + T + +MYAKC  I+EAE +F  
Sbjct: 387 VTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSK 446

Query: 192 --------------------------KMFPD--GKNHVAWTTMITGYSQNGYGFKAIECF 223
                                     K+F +   +N V+W  MI GY+Q+G   K  E  
Sbjct: 447 MENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELL 506

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
             M+VEG + ++ T  SIL AC A+SA + G  VH   +  G E++  V ++LI MY+KC
Sbjct: 507 SSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKC 566

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
           G++  AR + +     + V+WN+M+ G+ + G   EA+ LFK+M    +  ++ T+ +V+
Sbjct: 567 GEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVI 626

Query: 344 NCFASNIDLNNAKSVHSLI-----VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
           +       +   + +  ++     +K G + Y      ++D+  + G L  A      M 
Sbjct: 627 SACGRAGLVQEGREIFRIMQEDFRMKPGKQHY----GCMVDLLGRAGRLQEAEEFIQRMP 682

Query: 399 -DKDVISWTSLITGCAYHGSYEEA 421
            + D+  W +L+  C  H + + A
Sbjct: 683 CEPDISVWHALLGACKSHDNVQLA 706



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 138/520 (26%), Positives = 229/520 (44%), Gaps = 102/520 (19%)

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
             + G  KEA+ L   +  R + ++  TY  ++   A      + K VH  + + G    
Sbjct: 53  LCKAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAID 112

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
            ++ N+LI+ Y+K G++     VF  M  +DV++W+S+I   A +    +A   F  M+ 
Sbjct: 113 IYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKD 172

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
           + I P+ +   SIL AC   ++LE  +++H V   SG  + ++V  +L+ +Y+KCG I+ 
Sbjct: 173 ANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISL 232

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS- 549
           A  +F  M  R+V++WTA+I   AQ+ K  EA + Y++ML  G  P+ +TFV LL +C+ 
Sbjct: 233 ACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNT 292

Query: 550 ----------HAGLAE------------------------NARWYFESMDKVYGIKPGPD 575
                     H+ ++E                        +AR  F+ M K   I     
Sbjct: 293 PEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVIS---- 348

Query: 576 HYACMIDLLGRSG-----KLIEAKALLDQMVGE---PDATVWKALLSACRVHGDLELGER 627
            ++ MI    +SG      L E   LL++M  E   P+   + ++L AC VHG LE G +
Sbjct: 349 -WSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQ 407

Query: 628 -------------------------------AANNLF-ELEPMNAMPYVQLSNMYSTAGK 655
                                           A  +F ++E  N + +  L  MY   G 
Sbjct: 408 IHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGD 467

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
              A +V   M +R +      SW       ++ I+   G+    DI +K+ E++  +K 
Sbjct: 468 LTSAEKVFSEMSTRNV-----VSW-------NLMIA---GYAQSGDI-AKVFELLSSMKV 511

Query: 716 AGYVPDMNFALHNVEEEGK----EIGLAYHSEKLAVAFGL 751
            G+ PD    +  +E  G     E G   H+E  AV  GL
Sbjct: 512 EGFQPDRVTIISILEACGALSALERGKLVHAE--AVKLGL 549


>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
 gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
          Length = 936

 Score =  571 bits (1472), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 286/744 (38%), Positives = 439/744 (59%), Gaps = 1/744 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F    ++  Y   G L +A+K+F+  P ++  TW+S+I  YS      EAF +F +MQ
Sbjct: 194 DVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQ 253

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            EG R  + T  ++L  C     LQ G+       +T F+L+ FV T L+ MYA+C+   
Sbjct: 254 QEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPE 313

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A  +F       N + W+ +IT ++ +G+  +A+  FR M+ EG+  N+ TF S+L   
Sbjct: 314 DAAQVFGRMKQ-TNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGF 372

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
              S  +  +++H  I   G +    +++AL+++Y +C   D AR + +  E+ N +SWN
Sbjct: 373 TTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWN 432

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           SMI  + +   H +AL LF+ M  + I+ D   + ++L            K VH  + ++
Sbjct: 433 SMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEES 492

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G  G   V  +L++MYAK G LD A ++   M ++ + +W  LI G A HG   EAL+ +
Sbjct: 493 GLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAY 552

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             +++  I  D V   S+L+AC   T L  G+ +H+  ++ G  S + V N+L  +Y+KC
Sbjct: 553 QKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKC 612

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G + +A R+FDSM  R  ++W  ++   AQ+G+ +E L+   +M   G K + ITFV +L
Sbjct: 613 GSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVL 672

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
            +CSHAGL      YF S+    GI+   +HY C++DLLGR+GKL EA+  + +M  EP 
Sbjct: 673 SSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPG 732

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
              W +LL ACRV  DL+ G+ AA  L EL+P N+   V LSN+YS  G W++AA++R+ 
Sbjct: 733 IVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRA 792

Query: 666 MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFA 725
           M SR ++K PG S ++  ++VH F   D  HP   +IY K++E+   ++EAGYVPD    
Sbjct: 793 MASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPDTKMV 852

Query: 726 LHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLR 785
           LH+V+EE KE  LAYHSEKLA+AFGL++ P+ + + IFKNLRVC DCHTA K+IS +  R
Sbjct: 853 LHDVDEEQKESLLAYHSEKLAIAFGLISTPETSSLHIFKNLRVCEDCHTATKFISKITGR 912

Query: 786 HIILRDSNRFHHFKAGNCSCGDYW 809
            I++RD++RFHHF+ G+CSC DYW
Sbjct: 913 EIVVRDNHRFHHFRDGSCSCKDYW 936



 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 174/579 (30%), Positives = 297/579 (51%), Gaps = 5/579 (0%)

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
           Y+  G L +A   F +   +N  +W+ +I  YS+Y    EA  LF  M LEG  P+  TL
Sbjct: 2   YSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITL 61

Query: 137 DNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD 196
             VL  C     L+ G   H  +++  F  N  V T L++MY KC  + +A+ +F+   +
Sbjct: 62  VAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAE 121

Query: 197 GKNHVAWTTMITGYSQNGYGFK-AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGA 255
            KN V W  M+  YS  G  +K A+E F  M +EGV++N  TF ++L +     A   G 
Sbjct: 122 -KNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
            +H C+  S    +V+V +AL++ Y KCG L  AR++ +     +  +WNSMI  ++   
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISE 240

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
              EA  +F++M     + D  T+ S+L+   +   L + K V   I +T FE   FV  
Sbjct: 241 RSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGT 300

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
           ALI MYA+  + + A  VF  M+  ++I+W+++IT  A HG   EAL+YF  M+  GI P
Sbjct: 301 ALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILP 360

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           + V   S+L+     + LE   ++H +  + G   + ++ N+LV VY +C   +DA  VF
Sbjct: 361 NRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVF 420

Query: 496 DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAE 555
           D +   ++I+W ++I    Q  +  +ALQ +  M  +G +PD + F+ +L AC+      
Sbjct: 421 DQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGR 480

Query: 556 NARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
             +   + +++  G+   P     ++++  ++G+L  A+ +L +M  E   T W  L++ 
Sbjct: 481 TRKLVHQCVEE-SGLGGSPLVQTSLVNMYAKAGELDVAEVILQEM-DEQQITAWNVLING 538

Query: 616 CRVHGDLELGERAANNL-FELEPMNAMPYVQLSNMYSTA 653
             +HG       A   L  E  P++ + ++ + N  +++
Sbjct: 539 YALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSS 577



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 174/575 (30%), Positives = 281/575 (48%), Gaps = 11/575 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAA-----YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSN 110
           G L   +S   GF  NT++A      Y   G L +A+ +F E   KN  TW++++  YS 
Sbjct: 77  GILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSL 136

Query: 111 YGLDIE-AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAF 169
            G   + A ELF +M LEG + +  T  NVL        L++G+  H    ++   L+ F
Sbjct: 137 QGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVF 196

Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
           V T LV+ Y KC  + +A  +F   P  ++   W +MI+ YS +    +A   F+ M+ E
Sbjct: 197 VNTALVNTYTKCGSLTDARKVFDGMP-CRSVGTWNSMISAYSISERSGEAFFIFQRMQQE 255

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
           G   ++ TF SIL AC        G  V   I  + FE +++V +ALI MYA+C   + A
Sbjct: 256 GERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDA 315

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
            ++    +  N ++W+++I  FA  G   EAL  F+ M    I  +  T+ S+LN F + 
Sbjct: 316 AQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTP 375

Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
             L     +H LI + G +    + NAL+++Y +  + D A  VF+ ++  ++ISW S+I
Sbjct: 376 SGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMI 435

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
                   +++AL+ F  M+  GI PD V   +IL AC   +     + VH    +SG  
Sbjct: 436 GIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLG 495

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
            S  V  SLV +YAK G ++ A  +   M  + +  W  LI G A +G+ +EAL+ Y ++
Sbjct: 496 GSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKL 555

Query: 530 LARGTKPDYITFVGLLFAC-SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSG 588
                  D +TF+ +L AC S   LAE    +  +++   G+         + ++  + G
Sbjct: 556 QLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVE--CGLDSDVIVKNALTNMYSKCG 613

Query: 589 KLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
            +  A+ + D M     A  W  +L A   HG+ E
Sbjct: 614 SMENARRIFDSMPIR-SAVSWNGMLQAYAQHGESE 647



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 192/396 (48%), Gaps = 6/396 (1%)

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
           MY++CG L  A          N VSWN MI  ++     +EAL+LF  M    +  +  T
Sbjct: 1   MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
             +VLN   S  +L +   VH+L ++ GF     V  AL++MY K G L  A  VF  M 
Sbjct: 61  LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120

Query: 399 DKDVISWTSLITGCAYHG-SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
           +K+V++W +++   +  G  ++ A++ F+ M + G+  + +   ++L++  +   L  G+
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
            +H+   +S     + V+ +LV  Y KCG + DA +VFD M  R V TW ++I   + + 
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISE 240

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY 577
           +  EA   + +M   G + D +TF+ +L AC +    ++ +   ES+ +    +      
Sbjct: 241 RSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISET-SFELDLFVG 299

Query: 578 ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEP 637
             +I +  R     +A  +  +M  + +   W A+++A   HG      R    + + E 
Sbjct: 300 TALITMYARCRSPEDAAQVFGRM-KQTNLITWSAIITAFADHGHCGEALRYF-RMMQQEG 357

Query: 638 M--NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
           +  N + ++ L N ++T    E+ +R+  L+   G+
Sbjct: 358 ILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGL 393



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 115/265 (43%), Gaps = 34/265 (12%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++ +GE+D A  + ++M ++    WN +I  YA  GR R                     
Sbjct: 508 YAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSR--------------------- 546

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                     EA E + ++QLE     + T  +VL  C+    L  G+  H  A++   D
Sbjct: 547 ----------EALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLD 596

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            +  V   L +MY+KC  +  A  +F   P  ++ V+W  M+  Y+Q+G   + ++  R 
Sbjct: 597 SDVIVKNALTNMYSKCGSMENARRIFDSMPI-RSAVSWNGMLQAYAQHGESEEVLKLIRK 655

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQ-VHGCILSSGFEANVYVQSALIDMYAKCG 284
           M  EGV+ N  TF S+L++C+       G Q  H      G E        L+D+  + G
Sbjct: 656 MEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAG 715

Query: 285 DLDSARRLLEYSEID-NEVSWNSMI 308
            L  A + +    ++   V+W S++
Sbjct: 716 KLQEAEKYISKMPLEPGIVTWASLL 740


>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  571 bits (1472), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 295/743 (39%), Positives = 436/743 (58%), Gaps = 7/743 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  + ++  YA  G +  A K+F   P +N  TW+ L+ GY+  G      +LF  M 
Sbjct: 247 DLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMM 306

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
               + +++TL  VL+ C+    L++G+  H   IK  ++ N F+  GLVDMY+KC    
Sbjct: 307 ELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAI 366

Query: 186 EAEYLFKMF--PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +A  +FK    PD    V W+ +IT   Q G   ++I+ F  MR+     NQ+T  S+L+
Sbjct: 367 DAIGVFKTIKKPD---IVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLS 423

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE-V 302
           A        +G  +H C+   GFE +V V +AL+ MY K G +    +L E S +D + +
Sbjct: 424 AATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYE-SMVDRDLI 482

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SWN+ + G    G +   L++F  M       + +T+ S+L   +   D++  + VH+ I
Sbjct: 483 SWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHI 542

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           +K   +   FV  ALIDMYAK   L+ A + FN +  +D+ +WT +IT  A     E+AL
Sbjct: 543 IKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKAL 602

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
            YF  M+  G+ P+   ++  LS C+ L  LE GQQ+H++  KSG  S + V ++LV +Y
Sbjct: 603 NYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMY 662

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
           AKCGC+ +A  +F+++  RD I W  +I G AQNG+G +AL  +  ML  G  PD +TF 
Sbjct: 663 AKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFT 722

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
           G+L ACSH GL E  + +F SM + +GI P  DH ACM+D+LGR GK  E +  + +M  
Sbjct: 723 GILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQL 782

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
             +A +W+ +L A ++H +L LGE+AAN LFEL+P     Y+ LSN+++T G+W+D  RV
Sbjct: 783 SQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRV 842

Query: 663 RKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDM 722
           R LM S+G++KEPGCSWVE N QVH F+S D  HP   +I+ K+DE+   +    YVP  
Sbjct: 843 RSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKT 902

Query: 723 NFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAV 782
            + LHNV E  K+  L +HSE+LA+ F L++      IRIFKNLR+C DCH  MK+IS++
Sbjct: 903 EYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSI 962

Query: 783 YLRHIILRDSNRFHHFKAGNCSC 805
             + I++RD  RFHHFK G CSC
Sbjct: 963 TNQEIVVRDVRRFHHFKNGACSC 985



 Score =  268 bits (685), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 159/524 (30%), Positives = 274/524 (52%), Gaps = 25/524 (4%)

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           ++LR C+ K  L   +  HG  +K   + ++ +   LV++YAKC+    A  +    PD 
Sbjct: 117 SMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPD- 175

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           ++ V+WT +I G    G+   +I  F++M+ EG+  N+FT  + L AC+   A D G Q+
Sbjct: 176 RDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQM 235

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           H      G   +++V SAL+D+YAKCG+++ A ++       N+V+WN ++ G+A++G  
Sbjct: 236 HAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDV 295

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
              L LF  M   D+K ++FT  +VL   A++ +L   + +HSLI+K G+EG +F+   L
Sbjct: 296 TGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGL 355

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           +DMY+K G    A  VF  ++  D++ W++LIT     G  EE++K F  MR+    P+ 
Sbjct: 356 VDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQ 415

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
             + S+LSA      L++GQ +HA   K G  + ++V N+LV +Y K GC++D  ++++S
Sbjct: 416 YTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYES 475

Query: 498 MHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS-----HAG 552
           M  RD+I+W A + G    G     L  +  ML  G  P+  TF+ +L +CS     H G
Sbjct: 476 MVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYG 535

Query: 553 LAENARWYFESMDKVYGIKPGPDHYAC--MIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
              +A      +D         +++ C  +ID+  +   L +A    +++    D   W 
Sbjct: 536 RQVHAHIIKNQLDD--------NNFVCTALIDMYAKCMYLEDADVAFNRL-SVRDLFTWT 586

Query: 611 ALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAG 654
            +++    +     GE+A N   +++     P     N ++ AG
Sbjct: 587 VIITN---YAQTNQGEKALNYFRQMQQEGVKP-----NEFTLAG 622



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 193/402 (48%), Gaps = 11/402 (2%)

Query: 223 FRDMRVEGVESNQFT---------FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
           F   + E  + NQ           + S+L  CA+  +      +HG I+      + ++ 
Sbjct: 91  FEHQKTEDAKGNQVCWSSKKKLKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLW 150

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
            +L+++YAKC     AR +L      + VSW ++I G   +GF  +++ LF++M    I 
Sbjct: 151 VSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIM 210

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
            ++FT  + L   +  + L+  K +H+   K G     FV +AL+D+YAK G ++ A  +
Sbjct: 211 PNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKM 270

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           F  M +++ ++W  L+ G A  G     LK F  M    +  +   ++++L  CA    L
Sbjct: 271 FIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNL 330

Query: 454 EFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC 513
           + GQ +H++ +K G   +  +   LV +Y+KCG   DA  VF ++   D++ W+ALI   
Sbjct: 331 KQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCL 390

Query: 514 AQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPG 573
            Q G+ +E+++ +  M    T P+  T   LL A ++ G  +  +     + K YG +  
Sbjct: 391 DQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWK-YGFETD 449

Query: 574 PDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
                 ++ +  ++G + +   L + MV + D   W A LS 
Sbjct: 450 VAVSNALVTMYMKNGCVHDGTKLYESMV-DRDLISWNAYLSG 490



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 153/310 (49%), Gaps = 10/310 (3%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D + F    +I  YA    L +A   FN    ++ FTW+ +I  Y+      +A   F Q
Sbjct: 548 DDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQ 607

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           MQ EG +P+++TL   L  CS    L+ G+Q H    K+    + FV + LVDMYAKC C
Sbjct: 608 MQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGC 667

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + EAE LF+     ++ +AW T+I GY+QNG G KA+  FR M  EG+  +  TF  IL+
Sbjct: 668 MEEAEALFEALIR-RDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILS 726

Query: 244 ACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI-DNE 301
           AC+     + G +    +    G    V   + ++D+  + G  D     ++  ++  N 
Sbjct: 727 ACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNA 786

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKI---DDFTYPSVLNCFASNIDLNNAKSV 358
           + W + ++G ++       L L +K   +  ++   ++ +Y  + N FA+    ++ K V
Sbjct: 787 LIWET-VLGASKM---HNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRV 842

Query: 359 HSLIVKTGFE 368
            SL+   G +
Sbjct: 843 RSLMSSKGVK 852



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 35/169 (20%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           ALVD ++  G ++EA  LFE +  RD   WNT+I  YA +G+  +A              
Sbjct: 657 ALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKA-------------- 702

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
                         + AF +   M  EG  P   T   +L  CS +GL++ G++ H  ++
Sbjct: 703 --------------LTAFRM---MLDEGISPDGVTFTGILSACSHQGLVEEGKE-HFNSM 744

Query: 161 KTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
              F ++  V     +VD+  +     E E   +     +N + W T++
Sbjct: 745 YRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVL 793


>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 876

 Score =  570 bits (1469), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 290/746 (38%), Positives = 449/746 (60%), Gaps = 17/746 (2%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N+++  Y  +G +R+ +++F+E   ++  +W+SL+ GYS    + + +ELF  MQ+EGYR
Sbjct: 141 NSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYR 200

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  YT+  V+   + +G +  G Q H   +K  F+    V   L+ M +K   + +A  +
Sbjct: 201 PDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVV 260

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F    + K+ V+W +MI G+  NG   +A E F +M++ G +    TF S++ +CA++  
Sbjct: 261 FDNM-ENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKE 319

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE-IDNEVSWNSMIV 309
                 +H   L SG   N  V +AL+    KC ++D A  L      + + VSW +MI 
Sbjct: 320 LGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMIS 379

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC----FASNIDLNNAKSVHSLIVKT 365
           G+ + G   +A++LF  M    +K + FTY ++L      F S I        H+ ++KT
Sbjct: 380 GYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFISEI--------HAEVIKT 431

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
            +E    V  AL+D + K GN+  A  VF L++ KDVI+W++++ G A  G  EEA K F
Sbjct: 432 NYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIF 491

Query: 426 SDMRISGICPDHVVVSSILSACAELTV-LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
             +   GI P+     SI++AC   T  +E G+Q HA  +K    ++L V +SLV +YAK
Sbjct: 492 HQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAK 551

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
            G I  A+ +F     RD+++W ++I G AQ+G+ K+AL+ +++M  R  + D ITF+G+
Sbjct: 552 RGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGV 611

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           + AC+HAGL    + YF  M   + I P  +HY+CMIDL  R+G L +A  +++ M   P
Sbjct: 612 ISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPP 671

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
            ATVW+ +L+A RVH ++ELG+ AA  +  LEP ++  YV LSN+Y+ AG W +   VRK
Sbjct: 672 AATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRK 731

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
           LM  R ++KEPG SW+E  ++ + F++ D  HPL   IYSK+ E+   +++ GY PD N+
Sbjct: 732 LMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKLSELNTRLRDVGYQPDTNY 791

Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLL-TLPQGAPIRIFKNLRVCGDCHTAMKYISAVY 783
             H++E+E KE  L++HSE+LA+AFGL+ TLP+  P++I KNLRVCGDCH+ +K +S V 
Sbjct: 792 VFHDIEDEQKETILSHHSERLAIAFGLIATLPE-IPLQIVKNLRVCGDCHSFIKLVSLVE 850

Query: 784 LRHIILRDSNRFHHFKAGNCSCGDYW 809
            R+I++RDSNRFHHFK G CSCGDYW
Sbjct: 851 KRYIVVRDSNRFHHFKGGLCSCGDYW 876



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 173/566 (30%), Positives = 281/566 (49%), Gaps = 23/566 (4%)

Query: 84  REAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLC 143
           R A++LF++TP ++    + L++ YS      EA  LF  +   G  P  YT+  VL +C
Sbjct: 53  RFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVC 112

Query: 144 --SLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHV 201
             S  G +  GEQ H   +K     +  V   LVDMY K   + +   +F    D ++ V
Sbjct: 113 AGSFNGTV--GEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGD-RDVV 169

Query: 202 AWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI 261
           +W +++TGYS N +  +  E F  M+VEG   + +T  +++ A A   A   G Q+H  +
Sbjct: 170 SWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALV 229

Query: 262 LSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEAL 321
           +  GFE    V ++LI M +K G L  AR + +  E  + VSWNSMI G    G   EA 
Sbjct: 230 VKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAF 289

Query: 322 SLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMY 381
             F  M     K    T+ SV+   AS  +L   + +H   +K+G    + V  AL+   
Sbjct: 290 ETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVAL 349

Query: 382 AKQGNLDCAFMVFNLMQD-KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVV 440
            K   +D AF +F+LM   + V+SWT++I+G   +G  ++A+  FS MR  G+ P+H   
Sbjct: 350 TKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTY 409

Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT 500
           S+IL+    +    F  ++HA  +K+    S SV  +L+  + K G I+DA +VF+ + T
Sbjct: 410 STILTVQHAV----FISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIET 465

Query: 501 RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWY 560
           +DVI W+A++ G AQ G+ +EA + + Q+   G KP+  TF  ++ AC+    +      
Sbjct: 466 KDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQ 525

Query: 561 FESMDKVYGIKPGPDHYAC----MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSAC 616
           F +    Y IK   ++  C    ++ L  + G +  A  +  +   E D   W +++S  
Sbjct: 526 FHA----YAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQ-KERDLVSWNSMISGY 580

Query: 617 RVHGD----LELGERAANNLFELEPM 638
             HG     LE+ E       E++ +
Sbjct: 581 AQHGQAKKALEVFEEMQKRNLEVDAI 606



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 135/269 (50%), Gaps = 37/269 (13%)

Query: 29  VGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAK 87
           +  + + +S +  AL+D F   G I +A ++FE +  +D   W+ M+A YA +G   EA 
Sbjct: 429 IKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAA 488

Query: 88  KLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL-K 146
           K+F+                               Q+  EG +P+++T  +++  C+   
Sbjct: 489 KIFH-------------------------------QLTREGIKPNEFTFCSIINACTAPT 517

Query: 147 GLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTM 206
             +++G+QFH YAIK   +    V + LV +YAK   I  A  +FK   + ++ V+W +M
Sbjct: 518 ASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKE-RDLVSWNSM 576

Query: 207 ITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF 266
           I+GY+Q+G   KA+E F +M+   +E +  TF  +++ACA       G Q +  I+ +  
Sbjct: 577 ISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKG-QNYFNIMINDH 635

Query: 267 EANVYVQ--SALIDMYAKCGDLDSARRLL 293
             N  ++  S +ID+Y++ G L  A  ++
Sbjct: 636 HINPTMEHYSCMIDLYSRAGMLGKAMDII 664


>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
 gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  570 bits (1469), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 294/745 (39%), Positives = 434/745 (58%), Gaps = 3/745 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           DG     ++  Y   G L+E + +F++      F W+ +I  YS  G   E+  LF QM 
Sbjct: 184 DGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQML 243

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G +P+ YT  ++L+  +    ++ G Q HG   K  F+    VV  L+  Y   + + 
Sbjct: 244 ELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVR 303

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A+ LF    D ++ ++W +MI+GY +NG   + IE F  M V GV+ +  T  ++  AC
Sbjct: 304 CAQKLFDELTD-RDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVAC 362

Query: 246 AAVSARDFGAQVHG-CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           A +     G  +H   I ++  +  V   + L+DMY+KCGDL+SA R+ E  +    VSW
Sbjct: 363 ANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSW 422

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
            SMI G+ R+G    A+ LF +M +R +  D +   S+LN  A N +L + K VH  I +
Sbjct: 423 TSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRE 482

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
              E   FV+NAL DMYAK G++  A  VF+ M+ KDVISW ++I G   +    EAL  
Sbjct: 483 NNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTL 542

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           F++M+     PD   V+ IL ACA L  L+ G+++H   L++G      V N++V +Y K
Sbjct: 543 FAEMQRESK-PDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVK 601

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG +  A  +FD +  +D+++WT +I G   +G G EA+  ++QM   G +PD ++F+ +
Sbjct: 602 CGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISI 661

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L+ACSH+GL +     F  M K   I+P  +HYACM+DLL R+G L++A   +  M  +P
Sbjct: 662 LYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKP 721

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
           DAT+W ALL  CR+H D++L E+ A  +FELEP N   YV L+N+Y+ A KWE+  ++RK
Sbjct: 722 DATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRK 781

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
            +  RG++K PGCSW+E   +++IF++ D   P    I   +  +   +KE GY P   +
Sbjct: 782 KIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMKEEGYSPKTAY 841

Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
           AL N +E  KE+ L  HSEKLA+AFG+L LP G  IR+ KNLRVCGDCH   K++S    
Sbjct: 842 ALLNADEREKEVALCGHSEKLAMAFGMLNLPPGKTIRVTKNLRVCGDCHEMAKFMSKSAS 901

Query: 785 RHIILRDSNRFHHFKAGNCSCGDYW 809
           R IILRDS+RFHHFK G+CSC  YW
Sbjct: 902 REIILRDSSRFHHFKDGSCSCRGYW 926



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 169/560 (30%), Positives = 274/560 (48%), Gaps = 22/560 (3%)

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
           A EL    Q   +    Y   ++L+LC+ +  ++ G +       +   ++  +   LV 
Sbjct: 136 AMELLCSSQNSNFDLGAYC--SILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVF 193

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           MY KC  + E   +F    + K  + W  MI+ YS +G   ++I  F+ M   G++ N +
Sbjct: 194 MYVKCGDLKEGRMVFDKLSESKIFL-WNLMISEYSGSGNYGESINLFKQMLELGIKPNSY 252

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           TF SIL   AAV+  + G QVHG I   GF +   V ++LI  Y     +  A++L +  
Sbjct: 253 TFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDEL 312

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              + +SWNSMI G+ + G     + +F KM    + ID  T  +V    A+   L   K
Sbjct: 313 TDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGK 372

Query: 357 SVHSLIVKTG-FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
            +HS  +K    +     NN L+DMY+K G+L+ A  VF  M +K V+SWTS+ITG    
Sbjct: 373 VLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVRE 432

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G  + A+K F +M+  G+ PD   V+SIL+ACA    L+ G+ VH    ++   ++  V 
Sbjct: 433 GLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVS 492

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           N+L  +YAKCG + DA+ VF  M  +DVI+W  +I G  +N    EAL  + +M  R +K
Sbjct: 493 NALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEM-QRESK 551

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPG--PDHYA--CMIDLLGRSGKLI 591
           PD  T   +L AC+     +  R         Y ++ G   D Y    ++D+  + G L+
Sbjct: 552 PDGTTVACILPACASLAALDKGREIHG-----YALRNGYSEDKYVTNAVVDMYVKCGLLV 606

Query: 592 EAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP----YVQLS 647
            A++L D M+   D   W  +++   +HG    G  A N   ++      P    ++ + 
Sbjct: 607 LARSLFD-MIPNKDLVSWTVMIAGYGMHG---YGSEAINTFNQMRMTGIEPDEVSFISIL 662

Query: 648 NMYSTAGKWEDAARVRKLMK 667
              S +G  ++  ++  +MK
Sbjct: 663 YACSHSGLLDEGWKIFNIMK 682



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 187/358 (52%), Gaps = 12/358 (3%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           DR+    NT++  Y+  G L  A ++F     K   +W+S+I GY   GL   A +LF +
Sbjct: 385 DREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDE 444

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+  G  P  Y + ++L  C++ G L+ G+  H Y  +   + N+FV   L DMYAKC  
Sbjct: 445 MKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGS 504

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A  +F      K+ ++W TMI GY++N    +A+  F +M+ E  + +  T   IL 
Sbjct: 505 MKDAHDVFSHMKK-KDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILP 562

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           ACA+++A D G ++HG  L +G+  + YV +A++DMY KCG L  AR L +     + VS
Sbjct: 563 ACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVS 622

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI- 362
           W  MI G+   G+  EA++ F +M    I+ D+ ++ S+L   + +  L+    + +++ 
Sbjct: 623 WTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMK 682

Query: 363 ----VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYH 415
               ++   E Y      ++D+ A+ GNL  A      M  K D   W +L+ GC  H
Sbjct: 683 KECQIEPNLEHYA----CMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIH 736



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 196/454 (43%), Gaps = 57/454 (12%)

Query: 261 ILSSGFEANVYVQSALIDMYAKCG--DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
           +L SG +   Y      ++++K     L  A  L   S +D E+  +  IV F   G  K
Sbjct: 81  LLESGLKVKEY------ELFSKLSFSSLAYAPALETKSYMDVELDSSRKIVEFCEVGDLK 134

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
            A+ L     +++   D   Y S+L   A    + + + V S+I  +G      +   L+
Sbjct: 135 NAMELL--CSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLV 192

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
            MY K G+L    MVF+ + +  +  W  +I+  +  G+Y E++  F  M   GI P+  
Sbjct: 193 FMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSY 252

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
             SSIL   A +  +E G+QVH +  K G  S  +V NSL+  Y     +  A ++FD +
Sbjct: 253 TFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDEL 312

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG------ 552
             RDVI+W ++I G  +NG     ++ + +ML  G   D  T V +  AC++ G      
Sbjct: 313 TDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGK 372

Query: 553 -----------LAENARW-------------------YFESMDKVYGIKPGPDHYACMID 582
                      L    R+                    FE MD+   +      +  MI 
Sbjct: 373 VLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVV-----SWTSMIT 427

Query: 583 LLGRSGKLIEAKALLDQMVGE---PDATVWKALLSACRVHGDLELGERAANNLFE--LEP 637
              R G    A  L D+M      PD     ++L+AC ++G+L+ G+   + + E  LE 
Sbjct: 428 GYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLET 487

Query: 638 MNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
            N+     L++MY+  G  +DA  V   MK + +
Sbjct: 488 -NSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDV 520


>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  570 bits (1469), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 293/769 (38%), Positives = 453/769 (58%), Gaps = 7/769 (0%)

Query: 42  ALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTW 101
            L+DF  +  I +  ++ +     D +  N +I  Y     L +A+K+F E P ++  +W
Sbjct: 127 GLLDFEMAKSIHD--RVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSW 184

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIK 161
           +SLI GY+  G   EA E++++ +  G  P  YT+ +VLR C   G ++ G+  HG   K
Sbjct: 185 NSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEK 244

Query: 162 TCFDLNAFVVTGLVDMYAKCKCIFEAEYLF-KMFPDGKNHVAWTTMITGYSQNGYGFKAI 220
                +  V  GL+ MY K   + +   +F KM    ++ V+W TMI GYSQ G   ++I
Sbjct: 245 IGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVL--RDAVSWNTMICGYSQVGLYEESI 302

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
           + F +M V   + +  T  SIL AC  +   +FG  VH  +++SG+E +    + LI+MY
Sbjct: 303 KLFMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMY 361

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
           AKCG+L +++ +    +  + VSWNSMI  + + G   EA+ LFK M   D+K D  TY 
Sbjct: 362 AKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKT-DVKPDSVTYV 420

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
            +L+      DL+  K +H  + K GF     V+N L+DMYAK G +  +  VF  M+ +
Sbjct: 421 MLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR 480

Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
           D+I+W ++I  C +       L+  S MR  G+ PD   + SIL  C+ L     G+++H
Sbjct: 481 DIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIH 540

Query: 461 AVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGK 520
               K G  S + V N L+ +Y+KCG + ++ +VF  M T+DV+TWTALI  C   G+GK
Sbjct: 541 GCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGK 600

Query: 521 EALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACM 580
           +A++ + +M A G  PD++ FV ++FACSH+GL E    YF  M K Y I+P  +HYAC+
Sbjct: 601 KAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACV 660

Query: 581 IDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNA 640
           +DLL RS  L +A+  +  M  +PD+++W ALLSACR+ GD E+ ER +  + EL P + 
Sbjct: 661 VDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDT 720

Query: 641 MPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRT 700
             YV +SN+Y+  GKW+    +RK +K+RG++K+PGCSW+E  ++V++F +  +      
Sbjct: 721 GYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFE 780

Query: 701 DIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPI 760
           ++   +  +  L+ + GY+ ++ F LH+++E+ K   L  HSE+LA+AFGLL    G P+
Sbjct: 781 EVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPL 840

Query: 761 RIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           ++ KNLRVC DCHT  KYIS +  R +++RD+NRFH FK G CSCGDYW
Sbjct: 841 QVMKNLRVCEDCHTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 889



 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 179/610 (29%), Positives = 313/610 (51%), Gaps = 14/610 (2%)

Query: 37  SDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNT-MIAAYANSGRLREAKKLFN-ETP 94
           S ++RAL   + + ++ +   L   +       ++  +IA YA+      +  +F   +P
Sbjct: 17  SSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASP 76

Query: 95  FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLL--QRG 152
             N + W+S+I   ++ GL  EA  L+ + Q    +P  YT  +V+  C+  GLL  +  
Sbjct: 77  SNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACA--GLLDFEMA 134

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
           +  H   +   F  + ++   L+DMY +   + +A  +F+  P  ++ V+W ++I+GY+ 
Sbjct: 135 KSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMP-LRDVVSWNSLISGYNA 193

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYV 272
           NGY  +A+E +   R  GV  + +T  S+L AC  + + + G  +HG I   G + +V V
Sbjct: 194 NGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIV 253

Query: 273 QSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI 332
            + L+ MY K   L   RR+ +   + + VSWN+MI G+++ G ++E++ LF +M     
Sbjct: 254 NNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQF 312

Query: 333 KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM 392
           K D  T  S+L       DL   K VH  ++ +G+E     +N LI+MYAK GNL  +  
Sbjct: 313 KPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQE 372

Query: 393 VFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV 452
           VF+ M+ KD +SW S+I     +GS++EA+K F  M+ + + PD V    +LS   +L  
Sbjct: 373 VFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMK-TDVKPDSVTYVMLLSMSTQLGD 431

Query: 453 LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMG 512
           L  G+++H    K G  S++ V N+LV +YAKCG + D+ +VF++M  RD+ITW  +I  
Sbjct: 432 LHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIAS 491

Query: 513 CAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKP 572
           C  +      L+   +M   G  PD  T + +L  CS        +     + K+ G++ 
Sbjct: 492 CVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKL-GLES 550

Query: 573 GPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNL 632
                  +I++  + G L  +  +  +++   D   W AL+SAC ++G+   G++A    
Sbjct: 551 DVPVGNVLIEMYSKCGSLRNSFQVF-KLMKTKDVVTWTALISACGMYGE---GKKAVRAF 606

Query: 633 FELEPMNAMP 642
            E+E    +P
Sbjct: 607 GEMEAAGIVP 616



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 146/483 (30%), Positives = 233/483 (48%), Gaps = 35/483 (7%)

Query: 223 FRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK 282
            + +RV    S Q  F SI  A A+ +      ++H  I++ G   +V   + LI  YA 
Sbjct: 1   MKTLRVLHECSRQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAH 60

Query: 283 CGDLDSARRLLEYSEIDNEVS-WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPS 341
             D  S+  +   +   N V  WNS+I      G   EALSL+ +     ++ D +T+PS
Sbjct: 61  FRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPS 120

Query: 342 VLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
           V+N  A  +D   AKS+H  ++  GF    ++ NALIDMY +  +LD A  VF  M  +D
Sbjct: 121 VINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRD 180

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
           V+SW SLI+G   +G + EAL+ +   R  G+ PD   +SS+L AC  L  +E G  +H 
Sbjct: 181 VVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHG 240

Query: 462 VFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKE 521
           +  K G    + V+N L+ +Y K   + D  R+FD M  RD ++W  +I G +Q G  +E
Sbjct: 241 LIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEE 300

Query: 522 ALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESM----------------- 564
           +++ + +M+ +  KPD +T   +L AC H G  E  ++  + M                 
Sbjct: 301 SIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILIN 359

Query: 565 -----------DKVYGIKPGPD--HYACMIDLLGRSGKLIEAKALLDQMVGE--PDATVW 609
                       +V+      D   +  MI++  ++G   EA  L   M  +  PD+  +
Sbjct: 360 MYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTY 419

Query: 610 KALLSACRVHGDLELGERAANNLFELE-PMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
             LLS     GDL LG+    +L ++    N +    L +MY+  G+  D+ +V + MK+
Sbjct: 420 VMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKA 479

Query: 669 RGI 671
           R I
Sbjct: 480 RDI 482


>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 867

 Score =  570 bits (1468), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 289/740 (39%), Positives = 443/740 (59%), Gaps = 7/740 (0%)

Query: 72  TMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRP 131
           +++  Y  +  + + +++F+E   +N  +W+SL+ GYS  GL    +ELF QMQ EG  P
Sbjct: 133 SLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLP 192

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
           ++YT+  V+     +G++  G Q H   +K  F+    V   L+ +Y++   + +A  +F
Sbjct: 193 NRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVF 252

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
               + ++ V W +MI GY +NG   +  E F  M++ GV+    TF S++ +CA++   
Sbjct: 253 DKM-EIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLREL 311

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY-SEIDNEVSWNSMIVG 310
                +    L SGF  +  V +AL+   +KC ++D A  L     E  N VSW +MI G
Sbjct: 312 ALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISG 371

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
             + G + +A++LF +M    +K + FTY ++L              +H+ ++KT +E  
Sbjct: 372 CLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVF----VSEMHAEVIKTNYERS 427

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
             V  AL+D Y K GN   A  VF +++ KD+++W++++ G A  G  EEA K F  +  
Sbjct: 428 SSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIK 487

Query: 431 SGICPDHVVVSSILSACAELTVL-EFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
            GI P+    SS+++ACA  T   E G+Q HA  +K    ++L V ++LV +YAK G I+
Sbjct: 488 EGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNID 547

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
            A+ VF     RD+++W ++I G +Q+G+ K+AL+ +D+M  R    D +TF+G++ AC+
Sbjct: 548 SAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACT 607

Query: 550 HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
           HAGL E  + YF SM   + I P   HY+CMIDL  R+G L +A  ++++M   P ATVW
Sbjct: 608 HAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVW 667

Query: 610 KALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
           + LL A RVH ++ELGE AA  L  L+P ++  YV LSNMY+ AG W++   VRKLM  R
Sbjct: 668 RTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKR 727

Query: 670 GIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNV 729
            ++KEPG SW+E  ++ + F++ D  HPL   IYSK+ E+ + +K+AGY PD     H++
Sbjct: 728 KVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDAGYQPDTKNVFHDI 787

Query: 730 EEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIIL 789
           E+E KE  L++HSE+LA+AFGL+  P   PI+I KNLRVCGDCH   K +S V  R+I++
Sbjct: 788 EDEQKETILSHHSERLAIAFGLIATPPEIPIQIVKNLRVCGDCHNFTKLVSLVEQRYIVV 847

Query: 790 RDSNRFHHFKAGNCSCGDYW 809
           RDSNRFHHFK G CSCGDYW
Sbjct: 848 RDSNRFHHFKDGLCSCGDYW 867



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 170/547 (31%), Positives = 280/547 (51%), Gaps = 25/547 (4%)

Query: 86  AKKLFNETPFK--NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLC 143
           A  LF++ P +       + L++ YS      EA  LF  +     +P + TL  V  +C
Sbjct: 44  AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103

Query: 144 --SLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHV 201
             SL G L  G Q H   +K     +  V T LVDMY K + + +   +F    + +N V
Sbjct: 104 AGSLDGKL--GRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGE-RNVV 160

Query: 202 AWTTMITGYSQNG-YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
           +WT+++ GYS NG YG+   E F  M+ EGV  N++T  +++ A         G QVH  
Sbjct: 161 SWTSLLAGYSWNGLYGY-VWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAM 219

Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEA 320
           ++  GFE  + V ++LI +Y++ G L  AR + +  EI + V+WNSMI G+ R G   E 
Sbjct: 220 VVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEV 279

Query: 321 LSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDM 380
             +F KM    +K    T+ SV+   AS  +L   K +    +K+GF   + V  AL+  
Sbjct: 280 FEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVA 339

Query: 381 YAKQGNLDCAFMVFNLMQD-KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVV 439
            +K   +D A  +F+LM++ K+V+SWT++I+GC  +G  ++A+  FS MR  G+ P+H  
Sbjct: 340 LSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFT 399

Query: 440 VSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH 499
            S+IL+    +    F  ++HA  +K+    S SV  +L+  Y K G   DA +VF+ + 
Sbjct: 400 YSAILTVHYPV----FVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIE 455

Query: 500 TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC-SHAGLAENAR 558
            +D++ W+A++ G AQ G+ +EA + + Q++  G KP+  TF  ++ AC S    AE  +
Sbjct: 456 AKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGK 515

Query: 559 WYFESMDKVYGIKPGPDHYAC----MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
            +       Y IK   ++  C    ++ +  + G +  A  +  +   E D   W +++S
Sbjct: 516 QF-----HAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQ-KERDLVSWNSMIS 569

Query: 615 ACRVHGD 621
               HG 
Sbjct: 570 GYSQHGQ 576



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 144/478 (30%), Positives = 262/478 (54%), Gaps = 6/478 (1%)

Query: 69  TWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG 128
            +N++I+ Y+  G LR+A+ +F++   +++ TW+S+I GY   G D+E FE+F +MQL G
Sbjct: 231 VFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAG 290

Query: 129 YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
            +P+  T  +V++ C+    L   +     A+K+ F  +  V+T L+   +KCK + +A 
Sbjct: 291 VKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDAL 350

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
            LF +  +GKN V+WT MI+G  QNG   +A+  F  MR EGV+ N FT+ +ILT    V
Sbjct: 351 SLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPV 410

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
               F +++H  ++ + +E +  V +AL+D Y K G+   A ++ E  E  + ++W++M+
Sbjct: 411 ----FVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAML 466

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGF 367
            G+A+ G  +EA  LF ++    IK ++FT+ SV+N C +        K  H+  +K   
Sbjct: 467 AGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRL 526

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
                V++AL+ MYAK+GN+D A  VF   +++D++SW S+I+G + HG  ++AL+ F +
Sbjct: 527 NNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDE 586

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAKCG 486
           M+   +  D V    +++AC    ++E GQ+     +     + ++   + ++ +Y++ G
Sbjct: 587 MQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAG 646

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
            +  A  + + M      T    ++G A+  +  E  +   + L      D   +V L
Sbjct: 647 MLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLL 704



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 128/498 (25%), Positives = 237/498 (47%), Gaps = 32/498 (6%)

Query: 206 MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
           ++  YS++    +A+  F  +    ++ ++ T   +   CA       G QVH   +  G
Sbjct: 64  LLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFG 123

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
              +V V ++L+DMY K  +++  RR+ +     N VSW S++ G++  G +     LF 
Sbjct: 124 LVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFC 183

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           +M    +  + +T  +V+    +   +     VH+++VK GFE    V N+LI +Y++ G
Sbjct: 184 QMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLG 243

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
            L  A  VF+ M+ +D ++W S+I G   +G   E  + F+ M+++G+ P H+  +S++ 
Sbjct: 244 MLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIK 303

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT-RDVI 504
           +CA L  L   + +    LKSG  +   V  +L++  +KC  ++DA  +F  M   ++V+
Sbjct: 304 SCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVV 363

Query: 505 TWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL-------FACSHAGLAENA 557
           +WTA+I GC QNG   +A+  + QM   G KP++ T+  +L        +  HA + +  
Sbjct: 364 SWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSEMHAEVIKTN 423

Query: 558 RWYFESMD-----------------KVYGIKPGPD--HYACMIDLLGRSGKLIEAKALLD 598
                S+                  KV+ I    D   ++ M+    ++G+  EA  L  
Sbjct: 424 YERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFH 483

Query: 599 QMVGE---PDATVWKALLSAC-RVHGDLELGERAANNLFELEPMNAMPYVQ-LSNMYSTA 653
           Q++ E   P+   + ++++AC       E G++      ++   NA+     L  MY+  
Sbjct: 484 QLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKR 543

Query: 654 GKWEDAARVRKLMKSRGI 671
           G  + A  V K  K R +
Sbjct: 544 GNIDSAHEVFKRQKERDL 561



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 174/333 (52%), Gaps = 13/333 (3%)

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N ++  ++R    KEAL+LF  +    ++ D+ T   V N  A ++D    + VH   VK
Sbjct: 62  NQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVK 121

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            G   +  V  +L+DMY K  N++    VF+ M +++V+SWTSL+ G +++G Y    + 
Sbjct: 122 FGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWEL 181

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           F  M+  G+ P+   VS++++A     V+  G QVHA+ +K G   ++ V NSL+ +Y++
Sbjct: 182 FCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSR 241

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
            G + DA  VFD M  RD +TW ++I G  +NG+  E  + +++M   G KP ++TF  +
Sbjct: 242 LGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASV 301

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPG--PDH--YACMIDLLGRSGKLIEAKALLDQM 600
           + +C  A L E A      + +   +K G   D      ++  L +  ++ +A +L   M
Sbjct: 302 IKSC--ASLRELA---LVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLM 356

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLF 633
               +   W A++S C  +G    G   A NLF
Sbjct: 357 EEGKNVVSWTAMISGCLQNG----GNDQAVNLF 385



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 121/228 (53%), Gaps = 3/228 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           +R       ++ AY   G   +A K+F     K+   WS+++ GY+  G   EA +LF Q
Sbjct: 425 ERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQ 484

Query: 124 MQLEGYRPSQYTLDNVLRLC-SLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           +  EG +P+++T  +V+  C S     ++G+QFH YAIK   +    V + LV MYAK  
Sbjct: 485 LIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRG 544

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            I  A  +FK   + ++ V+W +MI+GYSQ+G   KA+E F +M+   ++ +  TF  ++
Sbjct: 545 NIDSAHEVFKRQKE-RDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVI 603

Query: 243 TACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSA 289
           TAC      + G +    +++       +   S +ID+Y++ G L+ A
Sbjct: 604 TACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKA 651



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/172 (20%), Positives = 80/172 (46%), Gaps = 35/172 (20%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           ++ ALV  ++  G ID A ++F++  +RD  +WN+MI+ Y+  G+ ++A ++F+E   +N
Sbjct: 532 VSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRN 591

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                          +D++A                 T   V+  C+  GL+++G+++  
Sbjct: 592 ---------------MDVDAV----------------TFIGVITACTHAGLVEKGQKYFN 620

Query: 158 YAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
             I     +N  +   + ++D+Y++   + +A  +    P       W T++
Sbjct: 621 SMIND-HHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLL 671


>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  570 bits (1468), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 298/764 (39%), Positives = 444/764 (58%), Gaps = 34/764 (4%)

Query: 51  EIDEAGQLFEKMSDRDGFT-----WNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           E  E G+    +  + GF+      N ++  Y+ SG L  A+++F+    ++  +++SLI
Sbjct: 265 EFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLI 324

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            G +  G    A  LF +M L+  +P   T+ ++L  C+  G L  G+QFH YAIK    
Sbjct: 325 SGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMT 384

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            +  V   L+D+Y KC  I  A   F                  Y Q     K+ + F  
Sbjct: 385 SDIVVEGSLLDLYVKCSDIKTAHEFF----------------LCYGQLDNLNKSFQIFTQ 428

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M++EG+  NQFT+PSIL  C  + A D G Q+H  +L +GF+ NVYV S LIDMYAK G 
Sbjct: 429 MQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGK 488

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           LD A ++    + ++ VSW +MI G+ +     EAL+LFK+M  + IK D+  + S ++ 
Sbjct: 489 LDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISA 548

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
            A    L+  + +H+    +G+     + NAL+ +YA+ G +  A+  F+ +  KD +SW
Sbjct: 549 CAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSW 608

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
            SL++G A  G +EEAL  F+ M  +G+  +     S +SA A +  +  G+Q+H +  K
Sbjct: 609 NSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRK 668

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
           +G  S   V N+L+ +YAKCG I+D             I+W ++I G +Q+G G EAL+ 
Sbjct: 669 TGYDSETEVSNALITLYAKCGTIDD-------------ISWNSMITGYSQHGCGFEALKL 715

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
           ++ M      P+++TFVG+L ACSH GL +    YF SM + + + P P+HYAC++DLLG
Sbjct: 716 FEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLG 775

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ 645
           RSG L  AK  +++M  +PDA VW+ LLSAC VH ++++GE AA++L ELEP ++  YV 
Sbjct: 776 RSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVL 835

Query: 646 LSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSK 705
           +SNMY+ +GKW+   R R++MK RG++KEPG SWVE ++ VH F + D+ HP    IY  
Sbjct: 836 VSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYEY 895

Query: 706 IDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKN 765
           +  +     E GYVP  N  L + E   K+     HSE+LA+AFGLL+L    P+ +FKN
Sbjct: 896 LRGLDFRAAENGYVPRCNSLLSDAEIRQKDPTEIIHSERLAIAFGLLSLTSSTPLYVFKN 955

Query: 766 LRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           LRVC DCH  +K++S +  R II+RDS RFHHFK G+CSC DYW
Sbjct: 956 LRVCEDCHNWIKHVSKITDRVIIVRDSYRFHHFKVGSCSCKDYW 999



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 151/475 (31%), Positives = 255/475 (53%), Gaps = 32/475 (6%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N +I  Y  +G L  AKK+F     ++  +W ++I G S  G + EA  LF Q+   
Sbjct: 200 FICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--- 256

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
                      VL  C+     + G+Q HG  +K  F    +V   LV +Y++   +  A
Sbjct: 257 -----------VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSA 305

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
           E +F      ++ V++ ++I+G +Q GY  +A+  F+ M ++  + +  T  S+L+ACA+
Sbjct: 306 EQIFHCMSQ-RDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACAS 364

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR-LLEYSEIDNEVSWNS 306
           V A   G Q H   + +G  +++ V+ +L+D+Y KC D+ +A    L Y ++DN      
Sbjct: 365 VGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNL----- 419

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
                       ++  +F +M    I  + FTYPS+L    +    +  + +H+ ++KTG
Sbjct: 420 -----------NKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTG 468

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
           F+   +V++ LIDMYAK G LD A  +F  +++ DV+SWT++I G   H  + EAL  F 
Sbjct: 469 FQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFK 528

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
           +M+  GI  D++  +S +SACA +  L+ G+Q+HA    SG    LS+ N+LV +YA+CG
Sbjct: 529 EMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCG 588

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
            + +A   FD ++ +D ++W +L+ G AQ+G  +EAL  + QM   G + +  TF
Sbjct: 589 KVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTF 643



 Score =  235 bits (600), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 164/552 (29%), Positives = 263/552 (47%), Gaps = 33/552 (5%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +I  Y   G L  A  +F+E P ++   W+ +   +    L      LF +M  +     
Sbjct: 103 LIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFD 162

Query: 133 QYTLDNVLRLCSLKGLLQR-GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
           +     VLR CS   +  R  EQ H   I + F+ + F+   L+D+Y K   +  A+ +F
Sbjct: 163 ERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVF 222

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
           +     ++ V+W  MI+G SQNGY  +A+  F  +              +L+AC  V   
Sbjct: 223 ENLK-ARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVEFF 267

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
           +FG Q+HG +L  GF +  YV +AL+ +Y++ G+L SA ++       + VS+NS+I G 
Sbjct: 268 EFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGL 327

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
           A+QG+   AL+LFKKM+    K D  T  S+L+  AS   L N K  HS  +K G     
Sbjct: 328 AQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDI 387

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
            V  +L+D+Y K  ++  A   F      D ++               ++ + F+ M+I 
Sbjct: 388 VVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLN---------------KSFQIFTQMQIE 432

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
           GI P+     SIL  C  L   + G+Q+H   LK+G   ++ V + L+ +YAK G ++ A
Sbjct: 433 GIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHA 492

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
            ++F  +   DV++WTA+I G  Q+ K  EAL  + +M  +G K D I F   + AC+  
Sbjct: 493 LKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGI 552

Query: 552 GLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKA 611
              +  R    +   + G          ++ L  R GK+ EA A  DQ+  + D   W +
Sbjct: 553 QALDQGR-QIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAK-DNVSWNS 610

Query: 612 LLSACRVHGDLE 623
           L+S     G  E
Sbjct: 611 LVSGFAQSGYFE 622



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 210/471 (44%), Gaps = 63/471 (13%)

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M   GV +N  TF  +L  C  +++R F                 Y    LID Y   GD
Sbjct: 72  MEQHGVRANSQTFLWLLEGC--LNSRSF-----------------YDGLKLIDFYLAFGD 112

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN- 344
           L+ A  + +   I +   WN +   F  +        LF++M  ++++ D+  +  VL  
Sbjct: 113 LNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRG 172

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
           C  + +     + +H+  + +GFE   F+ N LID+Y K G L  A  VF  ++ +D +S
Sbjct: 173 CSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVS 232

Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
           W ++I+G + +G  EEA+  F  +              +LSAC ++   EFG+Q+H + L
Sbjct: 233 WVAMISGLSQNGYEEEAMLLFCQI--------------VLSACTKVEFFEFGKQLHGLVL 278

Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ 524
           K G  S   V N+LV +Y++ G ++ A ++F  M  RD +++ +LI G AQ G    AL 
Sbjct: 279 KQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALA 338

Query: 525 FYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP---------- 574
            + +M     KPD +T   LL AC+  G   N + +       Y IK G           
Sbjct: 339 LFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHS-----YAIKAGMTSDIVVEGSL 393

Query: 575 -DHYACMIDL---------LGRSGKLIEAKALLDQMVGE---PDATVWKALLSACRVHGD 621
            D Y    D+          G+   L ++  +  QM  E   P+   + ++L  C   G 
Sbjct: 394 LDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGA 453

Query: 622 LELGERAANNLFELE-PMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
            +LGE+    + +     N      L +MY+  GK + A ++ + +K   +
Sbjct: 454 TDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDV 504



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 179/387 (46%), Gaps = 62/387 (16%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           ++  L+D ++  G++D A ++F ++ + D  +W  MIA Y    +  EA  LF E     
Sbjct: 475 VSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKE----- 529

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                                     MQ +G +       + +  C+    L +G Q H 
Sbjct: 530 --------------------------MQDQGIKSDNIGFASAISACAGIQALDQGRQIHA 563

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
            +  + +  +  +   LV +YA+C  + EA   F      K++V+W ++++G++Q+GY  
Sbjct: 564 QSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIY-AKDNVSWNSLVSGFAQSGYFE 622

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           +A+  F  M   G+E N FTF S ++A A ++    G Q+HG I  +G+++   V +ALI
Sbjct: 623 EALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALI 682

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
            +YAKCG +D             ++SWNSMI G+++ G   EAL LF+ M   D+  +  
Sbjct: 683 TLYAKCGTID-------------DISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHV 729

Query: 338 TYPSVLNCFASNIDL--------NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDC 389
           T+  VL+   S++ L         +    H+L+ K   E Y  V    +D+  + G L  
Sbjct: 730 TFVGVLSA-CSHVGLVDEGISYFRSMSEAHNLVPKP--EHYACV----VDLLGRSGLLSR 782

Query: 390 AFMVFNLMQ-DKDVISWTSLITGCAYH 415
           A      M    D + W +L++ C  H
Sbjct: 783 AKRFVEEMPIQPDAMVWRTLLSACNVH 809


>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  569 bits (1466), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 299/738 (40%), Positives = 445/738 (60%), Gaps = 4/738 (0%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS-NYGLDIEAFELFWQMQLEGYRP 131
           +++ +   G L EA ++F     K    + +++ GY+ N  LD +A   F +M+ +G RP
Sbjct: 115 LVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLD-DAVSFFCRMRYDGVRP 173

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
             Y    +L++C     L++G++ H   I   F  N F +TG+V+MYAKC+ + EA  +F
Sbjct: 174 VVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMF 233

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
              P+ ++ V W T+I+GY+QNG+G  A+E    M+ EG   +  T  SIL A A V + 
Sbjct: 234 DRMPE-RDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSL 292

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
             G  +HG  + +GFE+ V V +AL+DMY+KCG + +AR + +       VSWNSMI G+
Sbjct: 293 RIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGY 352

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
            + G    A+ +F+KM    +++ + T    L+  A   D+   + VH L+ +       
Sbjct: 353 VQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDV 412

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
            V N+LI MY+K   +D A  +F  +Q K ++SW ++I G A +G   EA+ YF  M++ 
Sbjct: 413 SVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQ 472

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
            I PD   + S++ A AEL+VL   + +H + +++    ++ V  +LV +YAKCG ++ A
Sbjct: 473 NIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTA 532

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
            ++FD M  R V TW A+I G   +G GK AL+ +++M     KP+ +TF+ +L ACSH+
Sbjct: 533 RKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHS 592

Query: 552 GLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKA 611
           GL E    YF SM K YG++P  DHY  M+DLLGR+ +L EA   + +M  EP  +V+ A
Sbjct: 593 GLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGA 652

Query: 612 LLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
           +L ACR+H ++ELGE+AAN +F+L+P +   +V L+N+Y+TA  W+  ARVR  M+ +GI
Sbjct: 653 MLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGI 712

Query: 672 RKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEE 731
           +K PG S VE  ++VH F S    HP    IY+ ++ +   IK AGY+PD N ++H+VE+
Sbjct: 713 QKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIKAAGYMPDTN-SVHDVED 771

Query: 732 EGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRD 791
             KE  L  HSEKLA+AF LL    G  I + KNLRVCGDCH A KYIS V  R II+RD
Sbjct: 772 VVKEQLLNSHSEKLAIAFSLLNTSPGTTIHLRKNLRVCGDCHNATKYISLVTKREIIVRD 831

Query: 792 SNRFHHFKAGNCSCGDYW 809
             RFHHFK G CSCGDYW
Sbjct: 832 MRRFHHFKDGTCSCGDYW 849



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 150/455 (32%), Positives = 232/455 (50%), Gaps = 2/455 (0%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F    ++  YA    + EA K+F+  P ++   W+++I GY+  G    A EL  +MQ E
Sbjct: 211 FAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEE 270

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G RP   T+ ++L   +  G L+ G   HGY+++  F+    V T LVDMY+KC  +  A
Sbjct: 271 GKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTA 330

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F     GK  V+W +MI GY QNG    A+E F+ M  E VE    T    L ACA 
Sbjct: 331 RLIFDRM-TGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACAD 389

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           +   + G  VH  +      ++V V ++LI MY+KC  +D A  + E  +    VSWN+M
Sbjct: 390 LGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAM 449

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I+G+A+ G   EA+  F KM  ++IK D FT  SV+   A    L  AK +H L+++T  
Sbjct: 450 ILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCL 509

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
           +   FV  AL+DMYAK G +  A  +F++M ++ V +W ++I G   HG  + AL+ F  
Sbjct: 510 DKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEK 569

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAKCG 486
           M+   I P+ V    +LSAC+   ++E G Q      K  G   ++    ++V +  +  
Sbjct: 570 MKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRAN 629

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKE 521
            +N+A      M     I+    ++G  +  K  E
Sbjct: 630 RLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVE 664



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 176/337 (52%), Gaps = 1/337 (0%)

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           + S+ +  PS +      S ++   Q    I+ +G  +    Q+ L+ ++ K G L  A 
Sbjct: 71  IPSHVYKHPSAILLELCTSMKEL-HQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAA 129

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
           R+ +  E   +  +++M+ G+AR     +A+S F +M    ++   + +  +L     N 
Sbjct: 130 RVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNA 189

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           DL   K +H  ++  GF    F    +++MYAK   ++ A+ +F+ M ++D++ W ++I+
Sbjct: 190 DLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIIS 249

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
           G A +G  + AL+    M+  G  PD + + SIL A A++  L  G+ +H   +++G  S
Sbjct: 250 GYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFES 309

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
            ++V  +LV +Y+KCG +  A  +FD M  + V++W ++I G  QNG    A++ + +M+
Sbjct: 310 FVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMM 369

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKV 567
               +   +T +G L AC+  G  E  R+  + +D++
Sbjct: 370 DEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQL 406



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 160/324 (49%), Gaps = 13/324 (4%)

Query: 54  EAGQLFEKMSDR-----DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY 108
           E G+   K+ D+     D    N++I+ Y+   R+  A ++F     K   +W+++I GY
Sbjct: 394 EQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGY 453

Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA 168
           +  G   EA + F +MQL+  +P  +T+ +V+   +   +L + +  HG  I+TC D N 
Sbjct: 454 AQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNV 513

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
           FV T LVDMYAKC  +  A  LF M  D ++   W  MI GY  +G G  A+E F  M+ 
Sbjct: 514 FVATALVDMYAKCGAVHTARKLFDMM-DERHVTTWNAMIDGYGTHGLGKAALELFEKMKK 572

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLD 287
           E ++ N+ TF  +L+AC+     + G Q  G +    G E  +    A++D+  +   L+
Sbjct: 573 EVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLN 632

Query: 288 SARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR--DIKIDDFTYPSVL-N 344
            A   ++   I+  +S    ++G  R   HK  + L +K   R  D+  DD  Y  +L N
Sbjct: 633 EAWDFIQKMPIEPAISVFGAMLGACR--IHKN-VELGEKAANRIFDLDPDDGGYHVLLAN 689

Query: 345 CFASNIDLNNAKSVHSLIVKTGFE 368
            +A+    +    V + + K G +
Sbjct: 690 IYATASMWDKVARVRTTMEKKGIQ 713



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 65/160 (40%), Gaps = 41/160 (25%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           ALVD ++  G +  A +LF+ M +R   TWN MI                          
Sbjct: 518 ALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMID------------------------- 552

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG--- 157
                 GY  +GL   A ELF +M+ E  +P++ T   VL  CS  GL++ G Q+ G   
Sbjct: 553 ------GYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMK 606

Query: 158 --YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
             Y ++   D        +VD+  +   + EA    +  P
Sbjct: 607 KDYGLEPAMDHYG----AMVDLLGRANRLNEAWDFIQKMP 642


>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  568 bits (1463), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 288/745 (38%), Positives = 442/745 (59%), Gaps = 5/745 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +  N +I  Y     L +A+K+F E P ++  +W+SLI GY+  G   EA E++++ +
Sbjct: 208 DLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFR 267

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G  P  YT+ +VLR C   G ++ G+  HG   K     +  V  GL+ MY K   + 
Sbjct: 268 NLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLI 327

Query: 186 EAEYLF-KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
           +   +F KM    ++ V+W TMI GYSQ G   ++I+ F +M V   + +  T  SIL A
Sbjct: 328 DGRRIFDKMVL--RDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFKPDLLTITSILQA 384

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C  +   +FG  VH  +++SG+E +    + LI+MYAKCG+L +++ +    +  + VSW
Sbjct: 385 CGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSW 444

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           NSMI  + + G   EA+ LFK M   D+K D  TY  +L+      DL   K +H  + K
Sbjct: 445 NSMINVYIQNGSFDEAMKLFKMMKT-DVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAK 503

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            GF     V+N L+DMYAK G +  +  VF  M+ +D+I+W ++I  C +       L+ 
Sbjct: 504 MGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRM 563

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
            S MR  G+ PD   + SIL  C+ L     G+++H    K G  S + V N L+ +Y+K
Sbjct: 564 ISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSK 623

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG + ++ +VF  M T+DV+TWTALI  C   G+GK+A++ + +M A G  PD++ FV +
Sbjct: 624 CGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAI 683

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           +FACSH+GL E    YF  M K Y I+P  +HYAC++DLL RS  L +A+  +  M  +P
Sbjct: 684 IFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKP 743

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
           D+++W ALLSACR+ GD E+ +R +  + EL P +   YV +SN+Y+  GKW+    +RK
Sbjct: 744 DSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRSIRK 803

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
            +K+RG++K+PGCSW+E  ++V++F +  +      ++   +  +  L+ + GY+ ++ F
Sbjct: 804 SIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLMAKEGYIANLQF 863

Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
            LH+++E+ K   L  HSE+LA+AFGLL    G P+++ KNLRVC DCHT  KYIS +  
Sbjct: 864 VLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIXQ 923

Query: 785 RHIILRDSNRFHHFKAGNCSCGDYW 809
           R +++RD+NRFH FK G CSCGDYW
Sbjct: 924 RELLVRDANRFHVFKDGACSCGDYW 948



 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 183/635 (28%), Positives = 322/635 (50%), Gaps = 15/635 (2%)

Query: 12  SLRCRSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWN 71
           S +  S+++   R  H        +S ++RAL   + + ++ +   L   +       ++
Sbjct: 52  STKLFSRVMKTLRVLHECSRQTLFSS-ISRALASAATTTQLHKLHSLIITLGLHHSVIFS 110

Query: 72  T-MIAAYANSGRLREAKKLFN-ETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGY 129
             +IA YA+      +  +F   +P  N + W+S+I   ++ GL  EA  L+ + Q    
Sbjct: 111 AKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRL 170

Query: 130 RPSQYTLDNVLRLCSLKGLL--QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           +P  YT  +V+  C+  GLL  +  +  H   +   F  + ++   L+DMY +   + +A
Sbjct: 171 QPDTYTFPSVINACA--GLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKA 228

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F+  P  ++ V+W ++I+GY+ NGY  +A+E +   R  GV  + +T  S+L AC  
Sbjct: 229 RKVFEEMP-LRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGG 287

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           + + + G  +HG I   G + +V V + L+ MY K   L   RR+ +   + + VSWN+M
Sbjct: 288 LGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTM 347

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I G+++ G ++E++ LF +M     K D  T  S+L       DL   K VH  ++ +G+
Sbjct: 348 ICGYSQVGLYEESIKLFMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGY 406

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
           E     +N LI+MYAK GNL  +  VF+ M+ KD +SW S+I     +GS++EA+K F  
Sbjct: 407 ECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKM 466

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           M+ + + PD V    +LS   +L  L  G+++H    K G  S++ V N+LV +YAKCG 
Sbjct: 467 MK-TDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGE 525

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           + D+ +VF++M  RD+ITW  +I  C  +      L+   +M   G  PD  T + +L  
Sbjct: 526 MGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPV 585

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
           CS        +     + K+ G++        +I++  + G L  +  +  +++   D  
Sbjct: 586 CSLLAAKRQGKEIHGCIFKL-GLESDVPVGNVLIEMYSKCGSLRNSFQVF-KLMKTKDVV 643

Query: 608 VWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
            W AL+SAC ++G+   G++A     E+E    +P
Sbjct: 644 TWTALISACGMYGE---GKKAVRAFGEMEAAGIVP 675



 Score =  226 bits (575), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 151/551 (27%), Positives = 265/551 (48%), Gaps = 21/551 (3%)

Query: 95  FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ 154
            KN +   S ++   NY +D +  E +   +L  +     TL  VL  CS + L     +
Sbjct: 25  IKNLYELKSRVHSSGNY-VDHQRREFYTSTKL--FSRVMKTL-RVLHECSRQTLFSSISR 80

Query: 155 FHGYAIKTC--FDLNAFVVT-----------GLVDMYAKCKCIFEAEYLFKMFPDGKNHV 201
               A  T     L++ ++T            L+  YA  +    +  +F++     N  
Sbjct: 81  ALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVY 140

Query: 202 AWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI 261
            W ++I   + NG   +A+  + + +   ++ + +TFPS++ ACA +   +    +H  +
Sbjct: 141 XWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRV 200

Query: 262 LSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEAL 321
           L  GF +++Y+ +ALIDMY +  DLD AR++ E   + + VSWNS+I G+   G+  EAL
Sbjct: 201 LXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEAL 260

Query: 322 SLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMY 381
            ++ +     +  D +T  SVL        +     +H LI K G +    VNN L+ MY
Sbjct: 261 EIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMY 320

Query: 382 AKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVS 441
            K   L     +F+ M  +D +SW ++I G +  G YEE++K F +M ++   PD + ++
Sbjct: 321 CKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM-VNQFKPDLLTIT 379

Query: 442 SILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR 501
           SIL AC  L  LEFG+ VH   + SG     +  N L+ +YAKCG +  +  VF  M  +
Sbjct: 380 SILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCK 439

Query: 502 DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYF 561
           D ++W ++I    QNG   EA++ + +M+    KPD +T+V LL   +  G     +   
Sbjct: 440 DSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELH 498

Query: 562 ESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGD 621
             + K+ G          ++D+  + G++ ++  + + M    D   W  ++++C    D
Sbjct: 499 CDLAKM-GFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKAR-DIITWNTIIASCVHSED 556

Query: 622 LELGERAANNL 632
             LG R  + +
Sbjct: 557 CNLGLRMISRM 567



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 146/483 (30%), Positives = 233/483 (48%), Gaps = 35/483 (7%)

Query: 223 FRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK 282
            + +RV    S Q  F SI  A A+ +      ++H  I++ G   +V   + LI  YA 
Sbjct: 60  MKTLRVLHECSRQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAH 119

Query: 283 CGDLDSARRLLEYSEIDNEV-SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPS 341
             D  S+  +   +   N V  WNS+I      G   EALSL+ +     ++ D +T+PS
Sbjct: 120 FRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPS 179

Query: 342 VLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
           V+N  A  +D   AKS+H  ++  GF    ++ NALIDMY +  +LD A  VF  M  +D
Sbjct: 180 VINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRD 239

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
           V+SW SLI+G   +G + EAL+ +   R  G+ PD   +SS+L AC  L  +E G  +H 
Sbjct: 240 VVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHG 299

Query: 462 VFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKE 521
           +  K G    + V+N L+ +Y K   + D  R+FD M  RD ++W  +I G +Q G  +E
Sbjct: 300 LIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEE 359

Query: 522 ALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESM----------------- 564
           +++ + +M+ +  KPD +T   +L AC H G  E  ++  + M                 
Sbjct: 360 SIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILIN 418

Query: 565 -----------DKVYGIKPGPD--HYACMIDLLGRSGKLIEAKALLDQMVGE--PDATVW 609
                       +V+      D   +  MI++  ++G   EA  L   M  +  PD+  +
Sbjct: 419 MYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTY 478

Query: 610 KALLSACRVHGDLELGERAANNLFELE-PMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
             LLS     GDL LG+    +L ++    N +    L +MY+  G+  D+ +V + MK+
Sbjct: 479 VMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKA 538

Query: 669 RGI 671
           R I
Sbjct: 539 RDI 541



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 9/164 (5%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G +F+   + D    N +I  Y+  G LR + ++F     K+  TW++LI     YG   
Sbjct: 600 GCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGK 659

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG-EQFH----GYAIKTCFDLNAFV 170
           +A   F +M+  G  P       ++  CS  GL++ G   FH     Y I+   +  A V
Sbjct: 660 KAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACV 719

Query: 171 VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
               VD+ ++   + +AE      P   +   W  +++    +G
Sbjct: 720 ----VDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSG 759


>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  568 bits (1463), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 296/829 (35%), Positives = 471/829 (56%), Gaps = 48/829 (5%)

Query: 24  RYTHNV--GNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDR----DGFTWN------ 71
           RY H +     +K  S  NR L DFS +    EA  LF+ +       DG T +      
Sbjct: 55  RYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVC 114

Query: 72  -----------------------------TMIAAYANSGRLREAKKLFNETPFKNFFTWS 102
                                        +++  Y  +    + + +F+E   KN  +W+
Sbjct: 115 GVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWT 174

Query: 103 SLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT 162
           SL+ GY+  GL+ E   L  QMQ+EG  P+ +T   VL   + + +++ G Q H   +K 
Sbjct: 175 SLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN 234

Query: 163 CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIEC 222
            F+   FV   L+ MY K + + +AE +F      ++ V W  MI GY+  G+  +  + 
Sbjct: 235 GFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVV-RDSVTWNIMIGGYAAIGFYLEGFQM 293

Query: 223 FRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK 282
           F  MR+ GV+ ++  F + L  C+     +F  Q+H  ++ +G+E    +++AL+  Y+K
Sbjct: 294 FHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSK 353

Query: 283 CGDLDSARRLLEYSEI-DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPS 341
           C  +D A +L   ++   N V+W +MI GF +   +K+A+ LF +M    ++ + FTY +
Sbjct: 354 CSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYST 413

Query: 342 VLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
           VL    S++       +H+ I+K  +E    V  AL+D Y K GN+  +  VF  +  KD
Sbjct: 414 VLAGKPSSL----LSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKD 469

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE-LTVLEFGQQVH 460
           +++W++++TG A     E+A++ F  +   G+ P+    SS+++AC+     +E G+Q+H
Sbjct: 470 IVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIH 529

Query: 461 AVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGK 520
           A  +KSG  ++L V ++L+ +Y+K G I  A +VF     RD+++W ++I G  Q+G  K
Sbjct: 530 ATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAK 589

Query: 521 EALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACM 580
           +AL+ +  M  +G   D +TF+G+L AC+HAGL E    YF  M K Y I    +HY+CM
Sbjct: 590 KALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCM 649

Query: 581 IDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNA 640
           +DL  R+G   +A  +++ M      T+W+ LL+ACRVH +LELG+ AA  L  L+P +A
Sbjct: 650 VDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDA 709

Query: 641 MPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRT 700
           + YV LSN+++ AG WE+ A VRKLM  R ++KE GCSW+E  +++  F++ D  HP   
Sbjct: 710 VGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSD 769

Query: 701 DIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPI 760
            +Y+K++E+ + +K+ GY PD N+  H+VEEE KE  L+ HSE+LA+A+GL+ LP GAPI
Sbjct: 770 LVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAPI 829

Query: 761 RIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +I KNLR+CGDCH  ++ IS +  R +I+RDSNRFHHFK G CSCG YW
Sbjct: 830 QIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 172/638 (26%), Positives = 317/638 (49%), Gaps = 27/638 (4%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N+A +   N G +  +    +      GF ++  +   +   R R A +LF+ETP K+  
Sbjct: 12  NKAKITVGN-GRLQSSIHHIKHFLHPHGFLYHQSLPFISLPSRPRYAHQLFDETPLKDIS 70

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
            ++ L++ +S    D EA  LF  +   G      TL   L++C +      G Q H  +
Sbjct: 71  HYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQS 130

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           +K+ F  +  V T LVDMY K +   +   +F      KN V+WT++++GY++NG   + 
Sbjct: 131 LKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGI-KNVVSWTSLLSGYARNGLNDEV 189

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           I     M++EGV  N FTF ++L A A  S  + G QVH  I+ +GFE   +V +ALI M
Sbjct: 190 IHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICM 249

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           Y K   +  A  + +   + + V+WN MI G+A  GF+ E   +F +M    +K+    +
Sbjct: 250 YLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVF 309

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ- 398
            + L   +   +LN  K +H  +VK G+E  + +  AL+  Y+K  ++D AF +F++   
Sbjct: 310 CTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADA 369

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
             +V++WT++I G   + + ++A+  F  M   G+ P+H   S++L+      +     Q
Sbjct: 370 AHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLL----SQ 425

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK 518
           +HA  +K+      SV  +L+  Y K G + ++ RVF S+  +D++ W+A++ G AQ   
Sbjct: 426 LHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRD 485

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFAC-SHAGLAENARWYFESMDKVYGIKPGPDHY 577
            ++A++ + Q++  G KP+  TF  ++ AC S A   E+ +    +      +K G  + 
Sbjct: 486 SEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHAT-----AVKSGKSNA 540

Query: 578 AC----MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLF 633
            C    ++ +  + G +  A+ +  +   E D   W ++++    HGD     + A  +F
Sbjct: 541 LCVSSALLTMYSKKGNIESAEKVFTRQ-EERDIVSWNSMITGYGQHGD----AKKALEVF 595

Query: 634 ELE-----PMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
           ++      P++ + ++ +    + AG  E+  +   +M
Sbjct: 596 QIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIM 633


>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 872

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 280/742 (37%), Positives = 446/742 (60%), Gaps = 8/742 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
            +++  Y      ++ + +F+E   +N  TW++LI GY+   L+ E   LF +MQ EG +
Sbjct: 136 TSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQ 195

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+ +T    L + + +G+  RG Q H   +K   D    V   L+++Y KC  + +A  L
Sbjct: 196 PNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARIL 255

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F    + K+ V W +MI+GY+ NG   +A+  F  MR+  V  ++ +F SI+  CA +  
Sbjct: 256 FDK-TEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKE 314

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKC-GDLDSARRLLEYSEIDNEVSWNSMIV 309
             F  Q+H  ++  GF  +  +++AL+  Y+KC   LD+ R   E   + N VSW +MI 
Sbjct: 315 LRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMIS 374

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           GF +    +EA+ LF +M  + ++ ++FTY  +L      + + +   VH+ +VKT +E 
Sbjct: 375 GFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTA----LPVISPSEVHAQVVKTNYER 430

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
              V  AL+D Y K G +D A  VF+ + +KD+++W++++ G A  G  E A+K FS++ 
Sbjct: 431 SSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELT 490

Query: 430 ISGICPDHVVVSSILSACAELTV-LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
             G+ P+    SSIL+ CA  T  +  G+Q H   +KS   SSL V ++L+ +YAK G I
Sbjct: 491 KGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHI 550

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
             A  VF     +D+++W ++I G AQ+G+  +AL  + +M  R  K D +TF+G+  AC
Sbjct: 551 ESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAAC 610

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           +HAGL E    YF+ M +   I P  +H +CM+DL  R+G+L +A  ++D M     +T+
Sbjct: 611 THAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTI 670

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           W+ +L+ACRVH   ELG  AA  +  + P ++  YV LSNMY+ +G W++ A+VRKLM  
Sbjct: 671 WRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNE 730

Query: 669 RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHN 728
           R ++KEPG SW+E  ++ + F++ DR HPL+  IY K++++   +K+ GY PD ++ L +
Sbjct: 731 RNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQD 790

Query: 729 VEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHII 788
           +++E KE  LA HSE+LA+AFGL+  P+G+P+ I KNLRVCGDCH  +K I+ +  R I+
Sbjct: 791 IDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHVVIKLIAKIEEREIV 850

Query: 789 LRDSNRFHHFKA-GNCSCGDYW 809
           +RDSNRFHHF + G CSCGD+W
Sbjct: 851 VRDSNRFHHFSSDGVCSCGDFW 872



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 158/548 (28%), Positives = 278/548 (50%), Gaps = 15/548 (2%)

Query: 78  ANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLD 137
           A+S RL  A  LF+++P ++  +++SL++G+S  G   EA  LF  +Q  G         
Sbjct: 42  ASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFS 101

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           +VL++ +       G Q H   IK  F  +  V T LVD Y K     +   +F    + 
Sbjct: 102 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKE- 160

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           +N V WTT+I+GY++N    + +  F  M+ EG + N FTF + L   A       G QV
Sbjct: 161 RNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQV 220

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           H  ++ +G +  + V ++LI++Y KCG++  AR L + +E+ + V+WNSMI G+A  G  
Sbjct: 221 HTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLD 280

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
            EAL +F  M    +++ + ++ S++   A+  +L   + +H  +VK GF   + +  AL
Sbjct: 281 LEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTAL 340

Query: 378 IDMYAK-QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           +  Y+K    LD   +        +V+SWT++I+G   +   EEA+  FS+M+  G+ P+
Sbjct: 341 MVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPN 400

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFD 496
               S IL+A   ++  E    VHA  +K+    S +V  +L+  Y K G +++A +VF 
Sbjct: 401 EFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFS 456

Query: 497 SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAEN 556
            +  +D++ W+A++ G AQ G+ + A++ + ++   G KP+  TF  +L  C+    +  
Sbjct: 457 GIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMG 516

Query: 557 ARWYFESMDKVYGIKPGPDHYAC----MIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
               F      + IK   D   C    ++ +  + G +  A+ +  +   E D   W ++
Sbjct: 517 QGKQFHG----FAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQ-REKDLVSWNSM 571

Query: 613 LSACRVHG 620
           +S    HG
Sbjct: 572 ISGYAQHG 579



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 230/442 (52%), Gaps = 10/442 (2%)

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           ++ A  LF   PD ++  ++T+++ G+S++G   +A   F +++  G+E +   F S+L 
Sbjct: 47  LYYAHNLFDKSPD-RDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLK 105

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
             A +    FG Q+H   +  GF  +V V ++L+D Y K  +    R + +  +  N V+
Sbjct: 106 VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVT 165

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           W ++I G+AR   ++E L+LF +M     + + FT+ + L   A          VH+++V
Sbjct: 166 WTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVV 225

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K G +    V+N+LI++Y K GN+  A ++F+  + K V++W S+I+G A +G   EAL 
Sbjct: 226 KNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALG 285

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            F  MR++ +       +SI+  CA L  L F +Q+H   +K G     ++  +L++ Y+
Sbjct: 286 MFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYS 345

Query: 484 KCGCINDANRVF-DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
           KC  + DA R+F ++    +V++WTA+I G  QN   +EA+  + +M  +G +P+  T+ 
Sbjct: 346 KCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYS 405

Query: 543 GLLFACSHAGLAE-NARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
            +L A      +E +A+    + ++   +         ++D   + GK+ EA  +    +
Sbjct: 406 VILTALPVISPSEVHAQVVKTNYERSSTVGTA------LLDAYVKLGKVDEAAKVFSG-I 458

Query: 602 GEPDATVWKALLSACRVHGDLE 623
              D   W A+L+     G+ E
Sbjct: 459 DNKDIVAWSAMLAGYAQAGETE 480



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 135/245 (55%), Gaps = 11/245 (4%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            Q+ +   +R       ++ AY   G++ EA K+F+    K+   WS+++ GY+  G   
Sbjct: 421 AQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETE 480

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLC-SLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
            A ++F ++   G +P+++T  ++L +C +    + +G+QFHG+AIK+  D +  V + L
Sbjct: 481 AAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSAL 540

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           + MYAK   I  AE +FK   + K+ V+W +MI+GY+Q+G   KA++ F++M+   V+ +
Sbjct: 541 LTMYAKKGHIESAEEVFKRQRE-KDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMD 599

Query: 235 QFTFPSILTACAAVSARDFGAQ-----VHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
             TF  +  AC      + G +     V  C ++   E N    S ++D+Y++ G L+ A
Sbjct: 600 SVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHN----SCMVDLYSRAGQLEKA 655

Query: 290 RRLLE 294
            ++++
Sbjct: 656 MKVID 660



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 117/243 (48%), Gaps = 3/243 (1%)

Query: 382 AKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVS 441
           A    L  A  +F+   D+D  S+TSL+ G +  G  +EA + F +++  G+  D  + S
Sbjct: 42  ASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFS 101

Query: 442 SILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR 501
           S+L   A L    FG+Q+H   +K G    +SV  SLV  Y K     D   VFD M  R
Sbjct: 102 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKER 161

Query: 502 DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYF 561
           +V+TWT LI G A+N   +E L  + +M   GT+P+  TF   L   +  G+        
Sbjct: 162 NVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 221

Query: 562 ESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG- 620
             + K  G+         +I+L  + G + +A+ L D+   +   T W +++S    +G 
Sbjct: 222 TVVVK-NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVT-WNSMISGYAANGL 279

Query: 621 DLE 623
           DLE
Sbjct: 280 DLE 282



 Score = 47.4 bits (111), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 31/168 (18%), Positives = 69/168 (41%), Gaps = 32/168 (19%)

Query: 43  LVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWS 102
           L  ++  G I+ A ++F++  ++D  +WN+MI+ YA  G+                    
Sbjct: 541 LTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQA------------------- 581

Query: 103 SLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT 162
                       ++A ++F +M+    +    T   V   C+  GL++ GE++    ++ 
Sbjct: 582 ------------MKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRD 629

Query: 163 C-FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
           C         + +VD+Y++   + +A  +    P+      W T++  
Sbjct: 630 CKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAA 677


>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  567 bits (1460), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 298/809 (36%), Positives = 456/809 (56%), Gaps = 50/809 (6%)

Query: 50   GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNET---------------- 93
            G + +A  LF+KM +RD   WN M+ AY  +    EA + F+                  
Sbjct: 766  GLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPDFSNLHCVI 825

Query: 94   --------------------------PF---KNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
                                      PF    N F W+  +  + + G  + A + F  +
Sbjct: 826  GGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTL 885

Query: 125  QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
                      TL  +L        L  GEQ H   IK+ F     V   L++MY+K   +
Sbjct: 886  LRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVV 945

Query: 185  FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            + AE  F   P+  + ++W TMI+ Y+QN    +AI  FRD+  +G++ +QFT  S+L A
Sbjct: 946  YAAEKTFINSPE-LDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRA 1004

Query: 245  CAAVSARDF---GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
            C+     ++   G+QVH   +  G   + +V +ALID+Y+K G +D A  LL      + 
Sbjct: 1005 CSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDL 1064

Query: 302  VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
             SWN+++ G+ +    ++AL  F  MH   I ID+ T  + +      I+L   K + + 
Sbjct: 1065 ASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAY 1124

Query: 362  IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
             +K GF    +V++ ++DMY K G++  A  +F  +   D ++WT++I+G   +G  + A
Sbjct: 1125 AIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHA 1184

Query: 422  LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
            L  +  MR+SG+ PD    ++++ A + LT LE G+Q+HA  +K        V  SLV +
Sbjct: 1185 LSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDM 1244

Query: 482  YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
            Y KCG + DA RVF  M  R V+ W A+++G AQ+G   EAL  +  M + G +PD +TF
Sbjct: 1245 YCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTF 1304

Query: 542  VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
            +G+L ACSH+GL   A  YF++M K YGI P  +HY+C++D LGR+G++ EA+ ++  M 
Sbjct: 1305 IGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMP 1364

Query: 602  GEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
             +  A++++ALL ACR  GD E  +R A+ L  L+P ++  YV LSN+Y+ + +W+D   
Sbjct: 1365 FKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTD 1424

Query: 662  VRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAG-YVP 720
             R +MK + ++K+PG SW++  ++VH+F+ +DR HP  + IY KI+++M  I+E G YVP
Sbjct: 1425 ARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVP 1484

Query: 721  DMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYIS 780
            D +F L +VEEE KE  L YHSEKLA+AFGL++ P  A IR+ KNLRVCGDCH+A+K IS
Sbjct: 1485 DTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCIS 1544

Query: 781  AVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             +  R I+LRD+NRFHHF+ G CSCGDYW
Sbjct: 1545 KLTQREIVLRDANRFHHFRNGTCSCGDYW 1573



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 169/677 (24%), Positives = 295/677 (43%), Gaps = 105/677 (15%)

Query: 40   NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
            N  +  +S  G +  A Q+F+K SDRD  TWN+++AAYA           F ++ ++N  
Sbjct: 650  NNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQ----------FADSSYENV- 698

Query: 100  TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
                           +E F LF  ++  G+  ++ TL  +L+LC L G +Q  E  HGYA
Sbjct: 699  ---------------LEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYA 743

Query: 160  IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
            +K  F+L+ FV   LV++Y K   + +A  LF   P+ ++ V W  M+  Y +N +  +A
Sbjct: 744  VKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPE-RDAVLWNVMLKAYVENSFQDEA 802

Query: 220  IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI--LSSGFEANVYVQSALI 277
            +  F      G                     DF + +H  I  ++S    N    +  +
Sbjct: 803  LRFFSAFHRSGFXP------------------DF-SNLHCVIGGVNSDVSNNRKRHAEQV 843

Query: 278  DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
              YA         ++  + +  N  +WN  +  F   G    A+  FK +    I  D  
Sbjct: 844  KAYAM--------KMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSV 895

Query: 338  TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
            T   +L+      DL+  + +H+L++K+ F     V+N+L++MY+K G +  A   F   
Sbjct: 896  TLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINS 955

Query: 398  QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA---ELTVLE 454
             + D+ISW ++I+  A +    EA+  F D+   G+ PD   ++S+L AC+   E     
Sbjct: 956  PELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFT 1015

Query: 455  FGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCA 514
             G QVH   +K G  +   V  +L+ +Y+K G +++A  +    +  D+ +W A++ G  
Sbjct: 1016 LGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYI 1075

Query: 515  QNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
            ++ K ++AL+ +  M   G   D IT   L  A   +G   N +       + Y IK G 
Sbjct: 1076 KSNKSRKALEHFSLMHEMGIPIDEIT---LATAIKASGCLINLKQ--GKQIQAYAIKLGF 1130

Query: 575  DH----YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGD--------- 621
            ++     + ++D+  + G +  A  L  + +  PD   W  ++S    +GD         
Sbjct: 1131 NNDLWVSSGVLDMYIKCGDMPNALELFGE-ISRPDEVAWTTMISGYIENGDEDHALSVYH 1189

Query: 622  --------------------------LELGERAANNLFELE-PMNAMPYVQLSNMYSTAG 654
                                      LE G++   N+ +L+  ++      L +MY   G
Sbjct: 1190 LMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCG 1249

Query: 655  KWEDAARVRKLMKSRGI 671
              +DA RV + M  R +
Sbjct: 1250 SVQDAYRVFRKMDVRKV 1266



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 209/481 (43%), Gaps = 52/481 (10%)

Query: 149  LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
            L+ G++ H   + +    + ++   L+ MY+KC  +  A  +F    D ++ V W +++ 
Sbjct: 627  LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSD-RDLVTWNSILA 685

Query: 209  GYSQ---NGY-----GFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
             Y+Q   + Y     GF+     R+    G    + T   +L  C           VHG 
Sbjct: 686  AYAQFADSSYENVLEGFRLFGLLREF---GFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742

Query: 261  ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEA 320
             +  GFE +++V  AL+++Y K G +  AR L +     + V WN M+  +    F  EA
Sbjct: 743  AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEA 802

Query: 321  LSLFKKMHARDIKIDDFTYPSVLNCF--ASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
            L  F   H R     DF   S L+C     N D++N +  H+  VK              
Sbjct: 803  LRFFSAFH-RSGFXPDF---SNLHCVIGGVNSDVSNNRKRHAEQVKA------------- 845

Query: 379  DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
                       A  +F   Q  ++ +W   +T   + G    A+  F  +  S I  D V
Sbjct: 846  ----------YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSV 895

Query: 439  VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
             +  ILSA      L+ G+Q+HA+ +KS     + V NSL+ +Y+K G +  A + F + 
Sbjct: 896  TLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINS 955

Query: 499  HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENAR 558
               D+I+W  +I   AQN    EA+  +  +L  G KPD  T   +L ACS     E   
Sbjct: 956  PELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGE--- 1012

Query: 559  WYFE--SMDKVYGIKPG--PDHY--ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
             YF   S   VY IK G   D +    +IDL  + GK+ EA+ LL     + D   W A+
Sbjct: 1013 -YFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKY-DFDLASWNAI 1070

Query: 613  L 613
            +
Sbjct: 1071 M 1071



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 147/321 (45%), Gaps = 20/321 (6%)

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           DL   K  H+ IV +G    +++ N LI MY+K G+L  A  VF+   D+D+++W S++ 
Sbjct: 626 DLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILA 685

Query: 411 GCAY--HGSYE---EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
             A     SYE   E  + F  +R  G     + ++ +L  C     ++  + VH   +K
Sbjct: 686 AYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVK 745

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
            G    L V  +LV +Y K G +  A  +FD M  RD + W  ++    +N    EAL+F
Sbjct: 746 IGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRF 805

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
           +      G  PD+ + +  +    ++ ++ N + + E + K Y +K  P      I    
Sbjct: 806 FSAFHRSGFXPDF-SNLHCVIGGVNSDVSNNRKRHAEQV-KAYAMKMFPFDQGSNIFAWN 863

Query: 586 R-------SGKLIEA----KALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFE 634
           +       +G+++ A    K LL   +G  D+     +LSA     DL+LGE+    + +
Sbjct: 864 KKLTEFLHAGQIVAAIDCFKTLLRSTIGH-DSVTLVIILSAAVGADDLDLGEQIHALVIK 922

Query: 635 LEPMNAMPYVQ-LSNMYSTAG 654
                 +P    L NMYS AG
Sbjct: 923 SSFAPVVPVSNSLMNMYSKAG 943



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 9/208 (4%)

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
           A++    G + H  I++SG   + Y+ + LI MY+KCG L SAR++ + S   + V+WNS
Sbjct: 623 AMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNS 682

Query: 307 MIVG---FARQGFHK--EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           ++     FA   +    E   LF  +      I   T   +L     +  +  +++VH  
Sbjct: 683 ILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
            VK GFE   FV+ AL+++Y K G +  A ++F+ M ++D + W  ++     +   +EA
Sbjct: 743 AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEA 802

Query: 422 LKYFSDMRISGICPD----HVVVSSILS 445
           L++FS    SG  PD    H V+  + S
Sbjct: 803 LRFFSAFHRSGFXPDFSNLHCVIGGVNS 830


>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  567 bits (1460), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 303/821 (36%), Positives = 467/821 (56%), Gaps = 60/821 (7%)

Query: 42   ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE-------- 92
            ALV+ +S  G + +A  LF+ M +RD   WN M+  Y   G  +EA +LF+E        
Sbjct: 767  ALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRP 826

Query: 93   -------------------------------------TPFKNFFTW----SSLIYGYSNY 111
                                                     + F W    S  ++   N+
Sbjct: 827  DEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDDNPDVFCWNKKLSECLWAGDNW 886

Query: 112  GLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV 171
            G    A E F  M          TL  VL   +    L+ G+Q HG A+K+  D +  V 
Sbjct: 887  G----AIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVA 942

Query: 172  TGLVDMYAKCKCIFEAEYLFKMFPDGK--NHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
              LV+MY+K  C + A    ++F D K  + ++W +MI+  +Q+    +++  F D+  E
Sbjct: 943  NSLVNMYSKMGCAYFAR---EVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHE 999

Query: 230  GVESNQFTFPSILTACAA-VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
            G++ + FT  S+L AC++ +   +   Q+H   L +G  A+ +V + LID+Y+K G ++ 
Sbjct: 1000 GLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEE 1059

Query: 289  ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
            A  L +  +  +   WN+M+ G+      K+AL LF  +H    K D  T  +       
Sbjct: 1060 AEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGC 1119

Query: 349  NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
             + L+  K +H+  +K GF+    VN+ ++DMY K G++  A +VFN +   D ++WTS+
Sbjct: 1120 LVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSM 1179

Query: 409  ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
            I+GC  +G+ ++AL+ +  MR S + PD    ++++ A + +T LE G+Q+HA  +K   
Sbjct: 1180 ISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDC 1239

Query: 469  CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
             S   V  SLV +YAKCG I DA R+F  M+ R++  W A+++G AQ+G  +EA+  +  
Sbjct: 1240 VSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKS 1299

Query: 529  MLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSG 588
            M + G +PD ++F+G+L ACSHAGL   A  Y  SM   YGI+P  +HY+C++D LGR+G
Sbjct: 1300 MKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAG 1359

Query: 589  KLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSN 648
             + EA  +++ M  +  A++ +ALL ACR+ GD+E G+R A  LF LEP ++  YV LSN
Sbjct: 1360 LVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSN 1419

Query: 649  MYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDE 708
            +Y+ A +W+D    RK+MK + ++K+PG SW++  + +H+F+ +DR HP    IY K++E
Sbjct: 1420 IYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEE 1479

Query: 709  IMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRV 768
            +M  I+E GYVPD  F L +VE+E KE  L YHSEKLA+A+GL++ P    IR+ KNLRV
Sbjct: 1480 MMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRV 1539

Query: 769  CGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            CGDCH A+KYIS V+ R I+LRD+NRFHHF+ G CSCGDYW
Sbjct: 1540 CGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 1580



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 181/654 (27%), Positives = 295/654 (45%), Gaps = 82/654 (12%)

Query: 66   DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY-----SNYGLDIEAFEL 120
            D F  N ++  Y+  G L  A+++F+ TP ++  TW++++  Y     SN G   E   L
Sbjct: 655  DHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHL 714

Query: 121  FWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK 180
            F  ++      ++ TL  VL+LC   G L   E  HGYAIK   + + FV   LV++Y+K
Sbjct: 715  FRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSK 774

Query: 181  CKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
            C  + +A  LF    + ++ V W  M+ GY Q G   +A + F +    G+  ++F+   
Sbjct: 775  CGRMRDARLLFDWMRE-RDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQL 833

Query: 241  ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
            IL   + V+  +      G  L+   +A           YA           L  S+ + 
Sbjct: 834  ILNGVSEVNWDE------GKWLADQVQA-----------YAA---------KLSLSDDNP 867

Query: 301  EV-SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
            +V  WN  +      G +  A+  F  M+  +I  D  T   VL   A   DL   K VH
Sbjct: 868  DVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVH 927

Query: 360  SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
             + VK+G +    V N+L++MY+K G    A  VFN M+  D+ISW S+I+ CA     E
Sbjct: 928  GIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEE 987

Query: 420  EALKYFSDMRISGICPDHVVVSSILSACAELTV-LEFGQQVHAVFLKSGGCSSLSVDNSL 478
            E++  F D+   G+ PDH  ++S+L AC+ L   L   +Q+H   LK+G  +   V  +L
Sbjct: 988  ESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTL 1047

Query: 479  VLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDY 538
            + VY+K G + +A  +F +    D+  W A++ G      GK+AL+ +  +   G K D 
Sbjct: 1048 IDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQ 1107

Query: 539  ITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH----YACMIDLLGRSGKLIEAK 594
            IT      AC    L +  +         + IK G D      + ++D+  + G ++ A 
Sbjct: 1108 ITLATAAKACGCLVLLDQGKQI-----HAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAG 1162

Query: 595  ALLDQMVGEPDATVWKALLSACRVHGD--------------------------------- 621
             + +  +  PD   W +++S C  +G+                                 
Sbjct: 1163 IVFN-YISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCV 1221

Query: 622  --LELGERAANNLFELEPMNAMPYV--QLSNMYSTAGKWEDAARVRKLMKSRGI 671
              LE G +   N+ +L+ ++  P+V   L +MY+  G  EDA R+ K M  R I
Sbjct: 1222 TALEQGRQLHANVIKLDCVSD-PFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNI 1274



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 166/378 (43%), Gaps = 50/378 (13%)

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G   H  I+ SG   + ++ + L+ MY+KCG L SAR++ + +   + V+WN+++  +A
Sbjct: 639 LGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYA 698

Query: 313 -----RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
                  G  +E L LF+ + A        T   VL    ++  L  A+ VH   +K G 
Sbjct: 699 ASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGL 758

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
           E   FV+ AL+++Y+K G +  A ++F+ M+++DV+ W  ++ G    G  +EA + FS+
Sbjct: 759 EWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSE 818

Query: 428 MRISGICPDHVVVSSILSACAELTVLE---FGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
              SG+ PD   V  IL+  +E+   E      QV A   K     SLS DN        
Sbjct: 819 FHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAK----LSLSDDNP------- 867

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
                            DV  W   +  C   G    A++ +  M   G   DY     L
Sbjct: 868 -----------------DVFCWNKKLSECLWAGDNWGAIECFVNM--NGLNIDYDAVTLL 908

Query: 545 LFACSHAGLAENARWYFESMDKVYGI--KPGPDHYA----CMIDLLGRSGKLIEAKALLD 598
           +   + AG  +      E   +V+GI  K G D        ++++  + G    A+ + +
Sbjct: 909 VVLAAVAGTDD-----LELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFN 963

Query: 599 QMVGEPDATVWKALLSAC 616
            M    D   W +++S+C
Sbjct: 964 DM-KHLDLISWNSMISSC 980



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 133/288 (46%), Gaps = 17/288 (5%)

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
            K  H+ IV +G  G  F++N L+ MY+K G+L  A  VF+   ++D+++W +++   A 
Sbjct: 640 GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 699

Query: 415 H-----GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
                 G+ +E L  F  +R S      + ++ +L  C     L   + VH   +K G  
Sbjct: 700 SVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLE 759

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
             + V  +LV +Y+KCG + DA  +FD M  RDV+ W  ++ G  Q G  KEA Q + + 
Sbjct: 760 WDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEF 819

Query: 530 LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIK-----PGPDHYACMIDL- 583
              G +PD  +   +L   S     E  +W  + + + Y  K       PD +     L 
Sbjct: 820 HRSGLRPDEFSVQLILNGVSEVNWDE-GKWLADQV-QAYAAKLSLSDDNPDVFCWNKKLS 877

Query: 584 ----LGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGER 627
                G +   IE    ++ +  + DA     +L+A     DLELG++
Sbjct: 878 ECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQ 925



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 21/191 (10%)

Query: 453 LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMG 512
           L  G+  HA  + SG      + N+L+ +Y+KCG ++ A +VFD+   RD++TW A++  
Sbjct: 637 LLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGA 696

Query: 513 CA-----QNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKV 567
            A      +G  +E L  +  + A       +T   +L  C ++G      W  E +   
Sbjct: 697 YAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSG----CLWAAEGVHG- 751

Query: 568 YGIKPGPDH----YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
           Y IK G +        ++++  + G++ +A+ L D M  E D  +W  +L      G ++
Sbjct: 752 YAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMR-ERDVVLWNMMLK-----GYVQ 805

Query: 624 LG-ERAANNLF 633
           LG E+ A  LF
Sbjct: 806 LGLEKEAFQLF 816


>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  567 bits (1460), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 298/809 (36%), Positives = 456/809 (56%), Gaps = 50/809 (6%)

Query: 50   GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNET---------------- 93
            G + +A  LF+KM +RD   WN M+ AY  +    EA + F+                  
Sbjct: 766  GLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFFPDFSNLHCVI 825

Query: 94   --------------------------PF---KNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
                                      PF    N F W+  +  + + G  + A + F  +
Sbjct: 826  GGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTL 885

Query: 125  QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
                      TL  +L        L  GEQ H   IK+ F     V   L++MY+K   +
Sbjct: 886  LRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVV 945

Query: 185  FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            + AE  F   P+  + ++W TMI+ Y+QN    +AI  FRD+  +G++ +QFT  S+L A
Sbjct: 946  YAAEKTFINSPE-LDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRA 1004

Query: 245  CAAVSARDF---GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
            C+     ++   G+QVH   +  G   + +V +ALID+Y+K G +D A  LL      + 
Sbjct: 1005 CSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDL 1064

Query: 302  VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
             SWN+++ G+ +    ++AL  F  MH   I ID+ T  + +      I+L   K + + 
Sbjct: 1065 ASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAY 1124

Query: 362  IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
             +K GF    +V++ ++DMY K G++  A  +F  +   D ++WT++I+G   +G  + A
Sbjct: 1125 AIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHA 1184

Query: 422  LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
            L  +  MR+SG+ PD    ++++ A + LT LE G+Q+HA  +K        V  SLV +
Sbjct: 1185 LSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDM 1244

Query: 482  YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
            Y KCG + DA RVF  M  R V+ W A+++G AQ+G   EAL  +  M + G +PD +TF
Sbjct: 1245 YCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTF 1304

Query: 542  VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
            +G+L ACSH+GL   A  YF++M K YGI P  +HY+C++D LGR+G++ EA+ ++  M 
Sbjct: 1305 IGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMP 1364

Query: 602  GEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
             +  A++++ALL ACR  GD E  +R A+ L  L+P ++  YV LSN+Y+ + +W+D   
Sbjct: 1365 FKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTD 1424

Query: 662  VRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAG-YVP 720
             R +MK + ++K+PG SW++  ++VH+F+ +DR HP  + IY KI+++M  I+E G YVP
Sbjct: 1425 ARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVP 1484

Query: 721  DMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYIS 780
            D +F L +VEEE KE  L YHSEKLA+AFGL++ P  A IR+ KNLRVCGDCH+A+K IS
Sbjct: 1485 DTDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCIS 1544

Query: 781  AVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             +  R I+LRD+NRFHHF+ G CSCGDYW
Sbjct: 1545 KLTQREIVLRDANRFHHFRNGTCSCGDYW 1573



 Score =  185 bits (470), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 171/677 (25%), Positives = 297/677 (43%), Gaps = 105/677 (15%)

Query: 40   NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
            N  +  +S  G +  A Q+F+K SDRD  TWN+++AAYA           F ++ ++N  
Sbjct: 650  NNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQ----------FADSSYENV- 698

Query: 100  TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
                           +E F LF  ++  G+  ++ TL  +L+LC L G +Q  E  HGYA
Sbjct: 699  ---------------LEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYA 743

Query: 160  IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
            +K  F+L+ FV   LV++Y K   + +A  LF   P+ ++ V W  M+  Y +N +  +A
Sbjct: 744  VKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPE-RDAVLWNVMLKAYVENSFQDEA 802

Query: 220  IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI--LSSGFEANVYVQSALI 277
            +  F      G       FP            DF + +H  I  ++S    N    +  +
Sbjct: 803  LRFFSAFHRSGF------FP------------DF-SNLHCVIGGVNSDVSNNRKRHAEQV 843

Query: 278  DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
              YA         ++  + +  N  +WN  +  F   G    A+  FK +    I  D  
Sbjct: 844  KAYAM--------KMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSV 895

Query: 338  TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
            T   +L+      DL+  + +H+L++K+ F     V+N+L++MY+K G +  A   F   
Sbjct: 896  TLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINS 955

Query: 398  QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA---ELTVLE 454
             + D+ISW ++I+  A +    EA+  F D+   G+ PD   ++S+L AC+   E     
Sbjct: 956  PELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFT 1015

Query: 455  FGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCA 514
             G QVH   +K G  +   V  +L+ +Y+K G +++A  +    +  D+ +W A++ G  
Sbjct: 1016 LGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYI 1075

Query: 515  QNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
            ++ K ++AL+ +  M   G   D IT   L  A   +G   N +       + Y IK G 
Sbjct: 1076 KSNKSRKALEHFSLMHEMGIPIDEIT---LATAIKASGCLINLKQ--GKQIQAYAIKLGF 1130

Query: 575  DH----YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGD--------- 621
            ++     + ++D+  + G +  A  L  + +  PD   W  ++S    +GD         
Sbjct: 1131 NNDLWVSSGVLDMYIKCGDMPNALELFGE-ISRPDEVAWTTMISGYIENGDEDHALSVYH 1189

Query: 622  --------------------------LELGERAANNLFELE-PMNAMPYVQLSNMYSTAG 654
                                      LE G++   N+ +L+  ++      L +MY   G
Sbjct: 1190 LMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCG 1249

Query: 655  KWEDAARVRKLMKSRGI 671
              +DA RV + M  R +
Sbjct: 1250 SVQDAYRVFRKMDVRKV 1266



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 131/476 (27%), Positives = 208/476 (43%), Gaps = 42/476 (8%)

Query: 149  LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
            L+ G++ H   + +    + ++   L+ MY+KC  +  A  +F    D ++ V W +++ 
Sbjct: 627  LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSD-RDLVTWNSILA 685

Query: 209  GYSQ--NGYGFKAIECFRD---MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS 263
             Y+Q  +      +E FR    +R  G    + T   +L  C           VHG  + 
Sbjct: 686  AYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVK 745

Query: 264  SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSL 323
             GFE +++V  AL+++Y K G +  AR L +     + V WN M+  +    F  EAL  
Sbjct: 746  IGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRF 805

Query: 324  FKKMHARDIKIDDFTYPSVLNCF--ASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMY 381
            F   H R     DF   S L+C     N D++N +  H+  VK                 
Sbjct: 806  FSAFH-RSGFFPDF---SNLHCVIGGVNSDVSNNRKRHAEQVKA---------------- 845

Query: 382  AKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVS 441
                    A  +F   Q  ++ +W   +T   + G    A+  F  +  S I  D V + 
Sbjct: 846  -------YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLV 898

Query: 442  SILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR 501
             ILSA      L+ G+Q+HA+ +KS     + V NSL+ +Y+K G +  A + F +    
Sbjct: 899  IILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPEL 958

Query: 502  DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYF 561
            D+I+W  +I   AQN    EA+  +  +L  G KPD  T   +L ACS     E   +  
Sbjct: 959  DLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGD--EGEYFTL 1016

Query: 562  ESMDKVYGIKPG--PDHY--ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
             S   VY IK G   D +    +IDL  + GK+ EA+ LL     + D   W A++
Sbjct: 1017 GSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKY-DFDLASWNAIM 1071



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 147/321 (45%), Gaps = 20/321 (6%)

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           DL   K  H+ IV +G    +++ N LI MY+K G+L  A  VF+   D+D+++W S++ 
Sbjct: 626 DLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILA 685

Query: 411 GCAY--HGSYE---EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
             A     SYE   E  + F  +R  G     + ++ +L  C     ++  + VH   +K
Sbjct: 686 AYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVK 745

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
            G    L V  +LV +Y K G +  A  +FD M  RD + W  ++    +N    EAL+F
Sbjct: 746 IGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRF 805

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
           +      G  PD+ + +  +    ++ ++ N + + E + K Y +K  P      I    
Sbjct: 806 FSAFHRSGFFPDF-SNLHCVIGGVNSDVSNNRKRHAEQV-KAYAMKMFPFDQGSNIFAWN 863

Query: 586 R-------SGKLIEA----KALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFE 634
           +       +G+++ A    K LL   +G  D+     +LSA     DL+LGE+    + +
Sbjct: 864 KKLTEFLHAGQIVAAIDCFKTLLRSTIGH-DSVTLVIILSAAVGADDLDLGEQIHALVIK 922

Query: 635 LEPMNAMPYVQ-LSNMYSTAG 654
                 +P    L NMYS AG
Sbjct: 923 SSFAPVVPVSNSLMNMYSKAG 943



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 9/208 (4%)

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
           A++    G + H  I++SG   + Y+ + LI MY+KCG L SAR++ + S   + V+WNS
Sbjct: 623 AMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNS 682

Query: 307 MIVGFARQGFHK-----EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           ++  +A+          E   LF  +      I   T   +L     +  +  +++VH  
Sbjct: 683 ILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGY 742

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
            VK GFE   FV+ AL+++Y K G +  A ++F+ M ++D + W  ++     +   +EA
Sbjct: 743 AVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEA 802

Query: 422 LKYFSDMRISGICPD----HVVVSSILS 445
           L++FS    SG  PD    H V+  + S
Sbjct: 803 LRFFSAFHRSGFFPDFSNLHCVIGGVNS 830


>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1047

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 288/744 (38%), Positives = 440/744 (59%), Gaps = 1/744 (0%)

Query: 66   DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
            D +  N +++ Y + G L  A+ +F+    ++  T+++LI G S  G   +A ELF +MQ
Sbjct: 305  DTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQ 364

Query: 126  LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            L+G  P   TL +++  CS  G L  G+Q H Y  K  F  N  +   L+++YAKC  I 
Sbjct: 365  LDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIE 424

Query: 186  EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
             A   F +  + +N V W  M+  Y        +   FR M++E +  NQ+T+PSIL  C
Sbjct: 425  TALNYF-LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 483

Query: 246  AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
              +   + G Q+H  I+ + F+ N YV S LIDMYAK G LD+A  +L      + VSW 
Sbjct: 484  IRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWT 543

Query: 306  SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
            +MI G+ +  F  +AL+ F++M  R I+ D+    + ++  A    L   + +H+    +
Sbjct: 544  TMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS 603

Query: 366  GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
            GF       NAL+ +Y+K GN++ A++ F   +  D I+W +L++G    G+ EEAL+ F
Sbjct: 604  GFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVF 663

Query: 426  SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
            + M   GI  ++    S + A +E   ++ G+QVHAV  K+G  S   V N+++ +YAKC
Sbjct: 664  ARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKC 723

Query: 486  GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
            G I+DA + F  +  ++ ++W A+I   +++G G EAL  +DQM+    +P+++T VG+L
Sbjct: 724  GSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVL 783

Query: 546  FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
             ACSH GL +    YFESM+  YG+ P P+HY C++D+L R+G L  AK  + +M  EPD
Sbjct: 784  SACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPD 843

Query: 606  ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
            A VW+ LLSAC VH ++E+GE AA++L ELEP ++  YV LSN+Y+   KW+     R+ 
Sbjct: 844  ALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQK 903

Query: 666  MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFA 725
            MK +G++KEPG SW+E  + +H F   D+ HPL  +I+    ++     E GYV D    
Sbjct: 904  MKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFKDLTKRASEIGYVQDCFSL 963

Query: 726  LHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLR 785
            L  +++E K+  +  HSEKLA++FGLL+LP   PI + KNLRVC DCH  +K++S V  R
Sbjct: 964  LSELQQEQKDPTIFIHSEKLAISFGLLSLPATMPINVMKNLRVCNDCHDWIKFVSKVSNR 1023

Query: 786  HIILRDSNRFHHFKAGNCSCGDYW 809
             II+RD+ RFHHF+ G CSC DYW
Sbjct: 1024 EIIVRDAYRFHHFEGGACSCKDYW 1047



 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 161/592 (27%), Positives = 281/592 (47%), Gaps = 16/592 (2%)

Query: 46  FSNSGEIDEAGQLFEKMS----DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTW 101
              +G +DE  +L  ++     D +      ++  Y   G L  A K+F+E P +  FTW
Sbjct: 78  LKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTW 137

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL-LQRGEQFHGYAI 160
           + +I   ++  L  + F LF +M  E   P++ T   VL  C    +     EQ H   I
Sbjct: 138 NKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARII 197

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG---KNHVAWTTMITGYSQNGYGF 217
                 +  V   L+D+Y++   +  A  +F    DG   K+H +W  MI+G S+N    
Sbjct: 198 YQGLGKSTIVCNPLIDLYSRNGFVDRARRVF----DGLYLKDHSSWVAMISGLSKNECEV 253

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           +AI  F DM V G+    + F S+L+AC  + + + G Q+HG +L  GF ++ YV +AL+
Sbjct: 254 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALV 313

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
            +Y   G L SA  +       + V++N++I G ++ G+ ++A+ LFK+M    ++ D  
Sbjct: 314 SLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSN 373

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           T  S++   +S+  L + + +H+   K GF     +  AL+++YAK  +++ A   F   
Sbjct: 374 TLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLET 433

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
           + ++V+ W  ++           + + F  M+I  I P+     SIL  C  L  LE G+
Sbjct: 434 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 493

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
           Q+H+  +K+    +  V + L+ +YAK G ++ A  +      +DV++WT +I G  Q  
Sbjct: 494 QIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 553

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSH-AGLAENARWYFESMDKVYGIKPGPDH 576
              +AL  + QML RG + D +     + AC+    L E  + + ++   V G       
Sbjct: 554 FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC--VSGFSSDLPF 611

Query: 577 YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
              ++ L  + G + EA    +Q     D   W AL+S  +  G+ E   R 
Sbjct: 612 QNALVTLYSKCGNIEEAYLAFEQTEA-GDNIAWNALVSGFQQSGNNEEALRV 662



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 137/291 (47%), Gaps = 18/291 (6%)

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
           C  +N  L+  + +HS I+K GF+    ++  L+D Y  +G+LD A  VF+ M ++ + +
Sbjct: 77  CLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFT 136

Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV-LEFGQQVHAVF 463
           W  +I   A      +    F  M    + P+    S +L AC   +V  +  +Q+HA  
Sbjct: 137 WNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARI 196

Query: 464 LKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEAL 523
           +  G   S  V N L+ +Y++ G ++ A RVFD ++ +D  +W A+I G ++N    EA+
Sbjct: 197 IYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAI 256

Query: 524 QFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPG--PDHYAC 579
           + +  M   G  P    F  +L AC             E  ++++G  +K G   D Y C
Sbjct: 257 RLFCDMYVLGIMPTPYAFSSVLSACKKIE-------SLEIGEQLHGLVLKLGFSSDTYVC 309

Query: 580 --MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
             ++ L    G LI A+ +   M  + DA  +  L++     G    GE+A
Sbjct: 310 NALVSLYFHLGSLISAEHIFSNM-SQRDAVTYNTLINGLSQCG---YGEKA 356



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 121/278 (43%), Gaps = 37/278 (13%)

Query: 36  ASDL---NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE 92
           +SDL   N  +  +S  G I+EA   FE+    D   WN +++ +  SG         NE
Sbjct: 606 SSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGN--------NE 657

Query: 93  TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
                                  EA  +F +M  EG   + +T  + ++  S    +++G
Sbjct: 658 -----------------------EALRVFARMNREGIDSNNFTFGSAVKAASETANMKQG 694

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
           +Q H    KT +D    V   ++ MYAKC  I +A+  F +    KN V+W  MI  YS+
Sbjct: 695 KQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQF-LELSMKNEVSWNAMINAYSK 753

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVY 271
           +G+G +A++ F  M    V  N  T   +L+AC+ +   D G +    + +  G      
Sbjct: 754 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPE 813

Query: 272 VQSALIDMYAKCGDLDSARR-LLEYSEIDNEVSWNSMI 308
               ++DM  + G L  A+  +LE     + + W +++
Sbjct: 814 HYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLL 851


>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  565 bits (1456), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 304/771 (39%), Positives = 455/771 (59%), Gaps = 38/771 (4%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           NT++  Y   G + +  K+F+    ++  +W+S I     +    +A E F  MQ+E   
Sbjct: 132 NTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENME 191

Query: 131 PSQYTLDNVLRLCSLKGL---LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
            S +TL +V   CS  G+   L+ G+Q HGY+++   D   F    L+ MYAK   + ++
Sbjct: 192 LSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFTNNALMAMYAKLGRVDDS 250

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
           + LF+ F D ++ V+W TMI+ +SQ+    +A+  FR M +EGVE +  T  S+L AC+ 
Sbjct: 251 KALFESFVD-RDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSH 309

Query: 248 VSARDFGAQVHGCIL-SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
           +   D G ++H  +L ++    N +V SAL+DMY  C  ++S RR+ ++        WN+
Sbjct: 310 LERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNA 369

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKI-----DDFTYPSVLNCFASNIDLNNAKSVHSL 361
           MI G+AR G  ++AL LF +M    IK+     +  T  SV+         +N +S+H  
Sbjct: 370 MISGYARNGLDEKALILFIEM----IKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGY 425

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
            VK GF+  ++V NAL+DMY++ G +D +  +F+ M+ +D +SW ++ITG    G Y  A
Sbjct: 426 AVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNA 485

Query: 422 LKYFSDM-RISGIC----------------PDHVVVSSILSACAELTVLEFGQQVHAVFL 464
           L    +M R+                    P+ + + ++L  CA L  +  G+++HA  +
Sbjct: 486 LVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAI 545

Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ 524
           ++   S ++V ++LV +YAKCGC+N + RVF+ M  ++VITW  LIM C  +GKG+EAL+
Sbjct: 546 RNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALE 605

Query: 525 FYDQMLA---RG--TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC 579
            +  M+A   RG   KP+ +TF+ +  ACSH+GL       F  M   +G++P  DHYAC
Sbjct: 606 LFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYAC 665

Query: 580 MIDLLGRSGKLIEAKALLDQMVGEPDAT-VWKALLSACRVHGDLELGERAANNLFELEPM 638
           ++DLLGR+G+L EA  L++ M  E D    W +LL ACR+H ++ELGE AA NL  LEP 
Sbjct: 666 VVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPN 725

Query: 639 NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPL 698
            A  YV LSN+YS+AG W  A  VRK M+  G++KEPGCSW+E   +VH F++ D  HP 
Sbjct: 726 VASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQ 785

Query: 699 RTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA 758
              ++  ++ +   +++ GYVPD +  LHNV+E+ KE  L  HSEKLA+AFG+L  P G 
Sbjct: 786 SEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGT 845

Query: 759 PIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            IR+ KNLRVC DCH A K+IS +  R II+RD  RFHHFK G CSCGDYW
Sbjct: 846 TIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 896



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 142/481 (29%), Positives = 234/481 (48%), Gaps = 30/481 (6%)

Query: 61  KMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFEL 120
           ++ D+  FT N ++A YA  GR+ ++K LF     ++  +W+++I  +S      EA   
Sbjct: 225 RVGDQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAF 284

Query: 121 FWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDL--NAFVVTGLVDMY 178
           F  M LEG      T+ +VL  CS    L  G++ H Y ++   DL  N+FV + LVDMY
Sbjct: 285 FRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRN-NDLIENSFVGSALVDMY 343

Query: 179 AKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFT 237
             C+ +     +F     G+    W  MI+GY++NG   KA+  F +M +V G+  N  T
Sbjct: 344 CNCRQVESGRRVFDHIL-GRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTT 402

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
             S++ AC    A      +HG  +  GF+ + YVQ+AL+DMY++ G +D +  + +  E
Sbjct: 403 MASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSME 462

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD-----------------IKIDDFTYP 340
           + + VSWN+MI G+   G +  AL L  +M   +                  K +  T  
Sbjct: 463 VRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLM 522

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
           +VL   A+   +   K +H+  ++        V +AL+DMYAK G L+ +  VFN M +K
Sbjct: 523 TVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNK 582

Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDM-----RISGICPDHVVVSSILSACAELTVLEF 455
           +VI+W  LI  C  HG  EEAL+ F +M     R     P+ V   ++ +AC+   ++  
Sbjct: 583 NVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISE 642

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVL-VYAKCGCINDANRVFDSMHTR--DVITWTALIMG 512
           G  +        G    S   + V+ +  + G + +A  + ++M      V  W++L+  
Sbjct: 643 GLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGA 702

Query: 513 C 513
           C
Sbjct: 703 C 703



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 145/557 (26%), Positives = 267/557 (47%), Gaps = 33/557 (5%)

Query: 93  TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
           +P ++  +W   +   +      EA   + +M + G RP  +    VL+  S    L+ G
Sbjct: 52  SPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTG 111

Query: 153 EQFHGYAIKTCFDLNAFVVTG-LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYS 211
           EQ H  A+K  +  ++  V   LV+MY KC  I +   +F    D ++ V+W + I    
Sbjct: 112 EQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITD-RDQVSWNSFIAALC 170

Query: 212 QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD---FGAQVHGCILSSGFEA 268
           +     +A+E FR M++E +E + FT  S+  AC+ +        G Q+HG  L  G + 
Sbjct: 171 RFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQ 229

Query: 269 NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH 328
             +  +AL+ MYAK G +D ++ L E     + VSWN+MI  F++     EAL+ F+ M 
Sbjct: 230 KTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMV 289

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG-FEGYKFVNNALIDMYAKQGNL 387
              +++D  T  SVL   +    L+  K +H+ +++        FV +AL+DMY     +
Sbjct: 290 LEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQV 349

Query: 388 DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM-RISGICPDHVVVSSILSA 446
           +    VF+ +  + +  W ++I+G A +G  E+AL  F +M +++G+ P+   ++S++ A
Sbjct: 350 ESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPA 409

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITW 506
           C         + +H   +K G      V N+L+ +Y++ G ++ +  +FDSM  RD ++W
Sbjct: 410 CVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSW 469

Query: 507 TALIMGCAQNGKGKEALQFYDQM-----------------LARGTKPDYITFVGLLFACS 549
             +I G   +G+   AL    +M                      KP+ IT + +L  C+
Sbjct: 470 NTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCA 529

Query: 550 H-AGLAENARWYFESMDKVYG--IKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
             A +A+    +  ++  +    I  G    + ++D+  + G L  ++ + ++M  + + 
Sbjct: 530 ALAAIAKGKEIHAYAIRNMLASDITVG----SALVDMYAKCGCLNLSRRVFNEMPNK-NV 584

Query: 607 TVWKALLSACRVHGDLE 623
             W  L+ AC +HG  E
Sbjct: 585 ITWNVLIMACGMHGKGE 601



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/456 (28%), Positives = 227/456 (49%), Gaps = 27/456 (5%)

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           ++  +W   +   +++    +AI  + +M V G   + F FP++L A + +     G Q+
Sbjct: 55  RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114

Query: 258 HGCILSSGF-EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           H   +  G+  ++V V + L++MY KCG +    ++ +     ++VSWNS I    R   
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEK 174

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSV-LNCFASNI----DLNNAKSVHSLIVKTGFEGYK 371
            ++AL  F+ M   ++++  FT  SV L C  SN+     L   K +H   ++ G +   
Sbjct: 175 WEQALEAFRAMQMENMELSSFTLVSVALAC--SNLGVMHGLRLGKQLHGYSLRVG-DQKT 231

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
           F NNAL+ MYAK G +D +  +F    D+D++SW ++I+  +    + EAL +F  M + 
Sbjct: 232 FTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLE 291

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS-VDNSLVLVYAKCGCIND 490
           G+  D V ++S+L AC+ L  L+ G+++HA  L++      S V ++LV +Y  C  +  
Sbjct: 292 GVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVES 351

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML-ARGTKPDYITFVGLLFACS 549
             RVFD +  R +  W A+I G A+NG  ++AL  + +M+   G  P+  T   ++ AC 
Sbjct: 352 GRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACV 411

Query: 550 HAGLAENARWYFESMDKVYGIKPG--PDHYA--CMIDLLGRSGKLIEAKALLDQMVGEPD 605
           H     N     ES+   Y +K G   D Y    ++D+  R GK+  ++ + D M    D
Sbjct: 412 HCEAFSNK----ESIHG-YAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVR-D 465

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAM 641
              W  +++   + G      R +N L  L  M  M
Sbjct: 466 RVSWNTMITGYVLSG------RYSNALVLLHEMQRM 495



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 127/280 (45%), Gaps = 26/280 (9%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP-FK 96
           +  AL+D +S  G++D +  +F+ M  RD  +WNTMI  Y  SGR   A  L +E    +
Sbjct: 437 VQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRME 496

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
           N              G                Y+P+  TL  VL  C+    + +G++ H
Sbjct: 497 NTKDVKKDDNDDEKGG---------------PYKPNAITLMTVLPGCAALAAIAKGKEIH 541

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
            YAI+     +  V + LVDMYAKC C+  +  +F   P+ KN + W  +I     +G G
Sbjct: 542 AYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPN-KNVITWNVLIMACGMHGKG 600

Query: 217 FKAIECFRDMRVEG-----VESNQFTFPSILTACAAVSARDFGAQV-HGCILSSGFEANV 270
            +A+E F++M  E       + N+ TF ++  AC+       G  + +      G E   
Sbjct: 601 EEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTS 660

Query: 271 YVQSALIDMYAKCGDLDSARRLLEY--SEIDNEVSWNSMI 308
              + ++D+  + G L+ A  L+    +E D   +W+S++
Sbjct: 661 DHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLL 700


>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  565 bits (1455), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 295/829 (35%), Positives = 471/829 (56%), Gaps = 48/829 (5%)

Query: 24  RYTHNV--GNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDR----DGFTWN------ 71
           RY H +     +K  S  NR L DFS +    EA  LF+ +       DG T +      
Sbjct: 55  RYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVC 114

Query: 72  -----------------------------TMIAAYANSGRLREAKKLFNETPFKNFFTWS 102
                                        +++  Y  +    + + +F+E   KN  +W+
Sbjct: 115 GVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWT 174

Query: 103 SLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT 162
           SL+ GY+  GL+ E   L  QMQ+EG  P+ +T   VL   + + +++ G Q H   +K 
Sbjct: 175 SLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN 234

Query: 163 CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIEC 222
            F+   FV   L+ MY K + + +AE +F      ++ V W  MI GY+  G+  +  + 
Sbjct: 235 GFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVV-RDSVTWNIMIGGYAAIGFYLEGFQM 293

Query: 223 FRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK 282
           F  MR+ GV+ ++  F + L  C+     +F  Q+H  ++ +G+E    +++AL+  Y+K
Sbjct: 294 FHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSK 353

Query: 283 CGDLDSARRLLEYSEI-DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPS 341
           C  +D A +L   ++   N V+W +MI GF +   +++A+ LF +M    ++ + FTY +
Sbjct: 354 CSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYST 413

Query: 342 VLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
           VL    S++       +H+ I+K  +E    V  AL+D Y K GN+  +  VF  +  KD
Sbjct: 414 VLAGKPSSL----LSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKD 469

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE-LTVLEFGQQVH 460
           +++W++++TG A     E+A++ F  +   G+ P+    SS+++AC+     +E G+Q+H
Sbjct: 470 IVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIH 529

Query: 461 AVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGK 520
           A  +KSG  ++L V ++L+ +Y+K G I  A +VF     RD+++W ++I G  Q+G  K
Sbjct: 530 ATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAK 589

Query: 521 EALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACM 580
           +AL+ +  M  +G   D +TF+G+L AC+HAGL E    YF  M K Y I    +HY+CM
Sbjct: 590 KALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCM 649

Query: 581 IDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNA 640
           +DL  R+G   +A  +++ M      T+W+ LL+ACRVH +LELG+ AA  L  L+P +A
Sbjct: 650 VDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDA 709

Query: 641 MPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRT 700
           + YV LSN+++ AG WE+ A VRKLM  R ++KE GCSW+E  +++  F++ D  HP   
Sbjct: 710 VGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSD 769

Query: 701 DIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPI 760
            +Y+K++E+ + +K+ GY PD N+  H+VEEE KE  L+ HSE+LA+A+GL+ LP GAPI
Sbjct: 770 LVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAPI 829

Query: 761 RIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +I KNLR+CGDCH  ++ IS +  R +I+RDSNRFHHFK G CSCG YW
Sbjct: 830 QIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878



 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 173/638 (27%), Positives = 317/638 (49%), Gaps = 27/638 (4%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N+A +   N G +  +    +      GF ++  +   +   R R A +LF+ETP K+  
Sbjct: 12  NKAKITVGN-GRLQSSIHHIKHFLHPHGFLYHQSLPFISLPSRPRYAHQLFDETPLKDIS 70

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
            ++ L++ +S    D EA  LF  +   G      TL   L++C +      G Q H  +
Sbjct: 71  HYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQS 130

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           +K+ F  +  V T LVDMY K +   +   +F      KN V+WT++++GY++NG   + 
Sbjct: 131 LKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGI-KNVVSWTSLLSGYARNGLNDEV 189

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           I     M++EGV  N FTF ++L A A  S  + G QVH  I+ +GFE   +V +ALI M
Sbjct: 190 IHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICM 249

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           Y K   +  A  + +   + + V+WN MI G+A  GF+ E   +F +M    +K+    +
Sbjct: 250 YLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVF 309

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ- 398
            + L   +   +LN  K +H  +VK G+E  + +  AL+  Y+K  ++D AF +F++   
Sbjct: 310 CTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADA 369

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
             +V++WT++I G   + + E+A+  F  M   G+ P+H   S++L+      +     Q
Sbjct: 370 AHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLL----SQ 425

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK 518
           +HA  +K+      SV  +L+  Y K G + ++ RVF S+  +D++ W+A++ G AQ   
Sbjct: 426 LHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRD 485

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFAC-SHAGLAENARWYFESMDKVYGIKPGPDHY 577
            ++A++ + Q++  G KP+  TF  ++ AC S A   E+ +    +      +K G  + 
Sbjct: 486 SEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHAT-----AVKSGKSNA 540

Query: 578 AC----MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLF 633
            C    ++ +  + G +  A+ +  +   E D   W ++++    HGD     + A  +F
Sbjct: 541 LCVSSALLTMYSKKGNIESAEKVFTRQ-EERDIVSWNSMITGYGQHGD----AKKALEVF 595

Query: 634 ELE-----PMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
           ++      P++ + ++ +    + AG  E+  +   +M
Sbjct: 596 QIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIM 633


>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
 gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
          Length = 1024

 Score =  565 bits (1455), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 285/744 (38%), Positives = 440/744 (59%), Gaps = 1/744 (0%)

Query: 66   DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
            D +  N +++ Y + G L  A+ +F+    ++  T+++LI G S  G   +A ELF +M 
Sbjct: 282  DTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH 341

Query: 126  LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            L+G  P   TL +++  CS  G L RG+Q H Y  K  F  N  +   L+++YAKC  I 
Sbjct: 342  LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADI- 400

Query: 186  EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            E    + +  + +N V W  M+  Y        +   FR M++E +  NQ+T+PSIL  C
Sbjct: 401  ETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 460

Query: 246  AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
              +   + G Q+H  I+ + F+ N YV S LIDMYAK G LD+A  +L      + VSW 
Sbjct: 461  IRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWT 520

Query: 306  SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
            +MI G+ +  F  +AL+ F++M  R I+ D+    + ++  A    L   + +H+    +
Sbjct: 521  TMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS 580

Query: 366  GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
            GF       NAL+ +Y++ G ++ +++ F   +  D I+W +L++G    G+ EEAL+ F
Sbjct: 581  GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVF 640

Query: 426  SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
              M   GI  ++    S + A +E   ++ G+QVHAV  K+G  S   V N+L+ +YAKC
Sbjct: 641  VRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKC 700

Query: 486  GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
            G I+DA + F  + T++ ++W A+I   +++G G EAL  +DQM+    +P+++T VG+L
Sbjct: 701  GSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVL 760

Query: 546  FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
             ACSH GL +    YFESM+  YG+ P P+HY C++D+L R+G L  AK  + +M  +PD
Sbjct: 761  SACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPD 820

Query: 606  ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
            A VW+ LLSAC VH ++E+GE AA++L ELEP ++  YV LSN+Y+ + KW+     R+ 
Sbjct: 821  ALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQK 880

Query: 666  MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFA 725
            MK +G++KEPG SW+E  + +H F   D+ HPL  +I+    ++     E GYV D    
Sbjct: 881  MKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSL 940

Query: 726  LHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLR 785
            L+ ++ E K+  +  HSEKLA++FGLL+LP   PI + KNLRVC DCH  +K++S V  R
Sbjct: 941  LNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNR 1000

Query: 786  HIILRDSNRFHHFKAGNCSCGDYW 809
             II+RD+ RFHHF+ G CSC DYW
Sbjct: 1001 EIIVRDAYRFHHFEGGACSCKDYW 1024



 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 163/591 (27%), Positives = 283/591 (47%), Gaps = 16/591 (2%)

Query: 46  FSNSGEIDEAGQLFEKMS----DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTW 101
              +G +DE  +L  ++     D +G     +   Y   G L  A K+F+E P +  FTW
Sbjct: 55  LKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTW 114

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL-LQRGEQFHGYAI 160
           + +I   ++  L  E F LF +M  E   P++ T   VL  C    +     EQ H   +
Sbjct: 115 NKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIL 174

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG---KNHVAWTTMITGYSQNGYGF 217
                 +  V   L+D+Y++   +  A  +F    DG   K+H +W  MI+G S+N    
Sbjct: 175 YQGLRDSTVVCNPLIDLYSRNGFVDLARRVF----DGLRLKDHSSWVAMISGLSKNECEA 230

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           +AI  F DM V G+    + F S+L+AC  + + + G Q+HG +L  GF ++ YV +AL+
Sbjct: 231 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALV 290

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
            +Y   G+L SA  +       + V++N++I G ++ G+ ++A+ LFK+MH   ++ D  
Sbjct: 291 SLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSN 350

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           T  S++   +++  L   + +H+   K GF     +  AL+++YAK  +++ A   F   
Sbjct: 351 TLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET 410

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
           + ++V+ W  ++           + + F  M+I  I P+     SIL  C  L  LE G+
Sbjct: 411 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 470

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
           Q+H+  +K+    +  V + L+ +YAK G ++ A  +      +DV++WT +I G  Q  
Sbjct: 471 QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 530

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSH-AGLAENARWYFESMDKVYGIKPGPDH 576
              +AL  + QML RG + D +     + AC+    L E  + + ++   V G       
Sbjct: 531 FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC--VSGFSSDLPF 588

Query: 577 YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGER 627
              ++ L  R GK+ E+    +Q     D   W AL+S  +  G+ E   R
Sbjct: 589 QNALVTLYSRCGKIEESYLAFEQTEA-GDNIAWNALVSGFQQSGNNEEALR 638



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 134/291 (46%), Gaps = 18/291 (6%)

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
           C  +N  L+  + +HS I+K G +    ++  L D Y  +G+L  AF VF+ M ++ + +
Sbjct: 54  CLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFT 113

Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV-LEFGQQVHAVF 463
           W  +I   A      E    F  M    + P+    S +L AC   +V  +  +Q+HA  
Sbjct: 114 WNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARI 173

Query: 464 LKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEAL 523
           L  G   S  V N L+ +Y++ G ++ A RVFD +  +D  +W A+I G ++N    EA+
Sbjct: 174 LYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAI 233

Query: 524 QFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPG--PDHYAC 579
           + +  M   G  P    F  +L AC             E  ++++G  +K G   D Y C
Sbjct: 234 RLFCDMYVLGIMPTPYAFSSVLSACKKIE-------SLEIGEQLHGLVLKLGFSSDTYVC 286

Query: 580 --MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
             ++ L    G LI A+ +   M  + DA  +  L++     G    GE+A
Sbjct: 287 NALVSLYFHLGNLISAEHIFSNM-SQRDAVTYNTLINGLSQCG---YGEKA 333



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 155/376 (41%), Gaps = 47/376 (12%)

Query: 36  ASDL---NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE 92
           +SDL   N  +  +S  G+I+E+   FE+    D   WN +++ +  SG         NE
Sbjct: 583 SSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGN--------NE 634

Query: 93  TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
                                  EA  +F +M  EG   + +T  + ++  S    +++G
Sbjct: 635 -----------------------EALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQG 671

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
           +Q H    KT +D    V   L+ MYAKC  I +AE  F +    KN V+W  +I  YS+
Sbjct: 672 KQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQF-LEVSTKNEVSWNAIINAYSK 730

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVY 271
           +G+G +A++ F  M    V  N  T   +L+AC+ +   D G      + S  G      
Sbjct: 731 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPE 790

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMIVGFARQGFHKE-ALSLFKKMHA 329
               ++DM  + G L  A+  ++   I  + + W +++        HK   +  F   H 
Sbjct: 791 HYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACV---VHKNMEIGEFAAHHL 847

Query: 330 RDIKIDD-FTYPSVLNCFASNI-----DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK 383
            +++ +D  TY  + N +A +      DL   K     + K   + +  V N++   Y  
Sbjct: 848 LELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVG 907

Query: 384 QGNLDCAFMVFNLMQD 399
             N   A  +    QD
Sbjct: 908 DQNHPLADEIHEYFQD 923


>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 997

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 305/799 (38%), Positives = 451/799 (56%), Gaps = 41/799 (5%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF----------NETPFK--- 96
           G++ E   LFE+M  RD   WN M+ AY   G   EA  L           NE   +   
Sbjct: 201 GKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLLS 260

Query: 97  -------------------------NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRP 131
                                       + + ++ GY + G      + F  M       
Sbjct: 261 RISGDDSEAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLEC 320

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
            Q T   VL        L  G+Q H  A+K   DL   V   L++MY K + I  A  +F
Sbjct: 321 DQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVF 380

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV-SA 250
               + ++ ++W ++I G +Q+    +A+  F  +   G++ + +T  S+L A +++   
Sbjct: 381 NNMSE-RDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEG 439

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
                Q+H   + +   A+ +V +ALID Y++   +  A  L   +  D  V+WN+M+ G
Sbjct: 440 LSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGRNNFD-LVAWNAMMSG 498

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           + +     + L LF  MH +  + DDFT  +VL        +N  K VH+  +K+G++  
Sbjct: 499 YTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLD 558

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
            +V++ ++DMY K G++  A   F+ +   D ++WT+LI+GC  +G  E AL  FS MR+
Sbjct: 559 LWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRL 618

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
            G+ PD   ++++  A + LT LE G+Q+HA  LK    S   V  SLV +YAKCG I+D
Sbjct: 619 MGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDD 678

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           A  +F  +   ++  W A+++G AQ+G+GKEALQ + QM + G KPD +TF+G+L ACSH
Sbjct: 679 AYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSH 738

Query: 551 AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
           +GL   A  Y  SM + YGIKP  +HY+C+ D LGR+G + EA+ L+D M  E  A++++
Sbjct: 739 SGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYR 798

Query: 611 ALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRG 670
            LL+ACRV GD E G+R A  L ELEP+++  YV LSNMY+ A KW++    R +MK   
Sbjct: 799 TLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHK 858

Query: 671 IRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVE 730
           ++K+PG SW+E  +++H+F+ +DR +P    IY K+ +++  IK+ GYVP+ +F L +VE
Sbjct: 859 VKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYKKVKDMIRDIKQEGYVPETDFTLVDVE 918

Query: 731 EEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILR 790
           EE KE  L YHSEKLAVAFGLL+ P   PIR+ KNLRVCGDCH AMKYIS VY R I+LR
Sbjct: 919 EEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYISKVYDREIVLR 978

Query: 791 DSNRFHHFKAGNCSCGDYW 809
           D+NRFH FK G CSCGDYW
Sbjct: 979 DANRFHRFKDGICSCGDYW 997



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 150/585 (25%), Positives = 261/585 (44%), Gaps = 53/585 (9%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI-----EAFELFW 122
           F  N +I+ Y+  G L  A+++F++ P ++  +W+S++  Y+     +     EAF LF 
Sbjct: 82  FLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFR 141

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
            ++ +    S+ TL  +L+LC   G +   E FHGYA K   D + FV   LV++Y K  
Sbjct: 142 ILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFG 201

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            + E   LF+  P  ++ V W  M+  Y + G+  +AI+        G+  N+ T    L
Sbjct: 202 KVKEGRVLFEEMP-YRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEIT----L 256

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
              + +S  D                            ++ G + S     + S +   +
Sbjct: 257 RLLSRISGDD----------------------------SEAGQVKSFENGNDASAVSEII 288

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           S N ++ G+   G +   L  F  M   D++ D  T+  VL        L   + VH + 
Sbjct: 289 SRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMA 348

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           +K G +    V+N+LI+MY K   +  A  VFN M ++D+ISW S+I G A      EA+
Sbjct: 349 LKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAV 408

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTV-LEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
             F  +   G+ PDH  ++S+L A + L   L   +Q+H   +K+   +   V  +L+  
Sbjct: 409 CLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDA 468

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           Y++  C+ +A  +F   +  D++ W A++ G  Q+  G + L+ +  M  +G + D  T 
Sbjct: 469 YSRNRCMKEAEVLF-GRNNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTL 527

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH----YACMIDLLGRSGKLIEAKALL 597
             +L  C         +         Y IK G D      + ++D+  + G +  A+   
Sbjct: 528 ATVLKTCGFLFAINQGKQV-----HAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAF 582

Query: 598 DQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           D  +  PD   W  L+S C  +G+    ERA +   ++  M  +P
Sbjct: 583 DS-IPVPDDVAWTTLISGCIENGE---EERALHVFSQMRLMGVLP 623



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 7/201 (3%)

Query: 247 AVSARDF--GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           A+S  D   G   H  IL+       ++ + LI MY+KCG L  ARR+ +     + VSW
Sbjct: 56  AISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSW 115

Query: 305 NSMIVGFARQGFH-----KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           NS++  +A+         KEA  LF+ +    +     T   +L     +  +  ++S H
Sbjct: 116 NSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFH 175

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
               K G +G  FV  AL+++Y K G +    ++F  M  +DV+ W  ++      G  E
Sbjct: 176 GYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKE 235

Query: 420 EALKYFSDMRISGICPDHVVV 440
           EA+   S    SG+ P+ + +
Sbjct: 236 EAIDLSSAFHTSGLHPNEITL 256



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 89/201 (44%), Gaps = 9/201 (4%)

Query: 348 SNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTS 407
           S  DL   K  H+ I+       +F+ N LI MY+K G+L  A  VF+ M ++D++SW S
Sbjct: 58  STSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNS 117

Query: 408 LITGCAYHGSYE-------EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
           ++   AY  S E       EA   F  +R   +    + +S +L  C     +   +  H
Sbjct: 118 ILA--AYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFH 175

Query: 461 AVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGK 520
               K G      V  +LV +Y K G + +   +F+ M  RDV+ W  ++    + G  +
Sbjct: 176 GYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKE 235

Query: 521 EALQFYDQMLARGTKPDYITF 541
           EA+         G  P+ IT 
Sbjct: 236 EAIDLSSAFHTSGLHPNEITL 256



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 102/242 (42%), Gaps = 51/242 (21%)

Query: 453 LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMG 512
           L  G+  HA  L         + N+L+ +Y+KCG +  A RVFD M  RD+++W +++  
Sbjct: 62  LMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAA 121

Query: 513 CAQNGKG-----KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKV 567
            AQ+ +G     KEA   +  +         +T   +L  C H+G       Y  + +  
Sbjct: 122 YAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSG-------YVCASESF 174

Query: 568 YGIKPGPDHYACMIDLLG-------------RSGKLIEAKALLDQMVGEPDATVWKALLS 614
           +G       YAC I L G             + GK+ E + L ++M    D  +W  +L 
Sbjct: 175 HG-------YACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYR-DVVLWNLMLK 226

Query: 615 ACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
           A      LE+G       F+ E ++      LS+ + T+G   +   +R L +  G   E
Sbjct: 227 AY-----LEMG-------FKEEAID------LSSAFHTSGLHPNEITLRLLSRISGDDSE 268

Query: 675 PG 676
            G
Sbjct: 269 AG 270


>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 290/766 (37%), Positives = 456/766 (59%), Gaps = 4/766 (0%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           F   G+++ A +LF++M  ++ F+ NTMI  Y  SG L EA+ LF+    +   TW+ LI
Sbjct: 111 FLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLI 170

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            GY+      EAF LF +M   G  P   +L  +L   +    +    Q H + IK  +D
Sbjct: 171 GGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYD 230

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
               V   L+D Y K + +  A  LF   P+ ++ V +  ++TGYS+ G+  +AI  F  
Sbjct: 231 STLVVSNSLLDSYCKTRSLGLAFQLFNDIPE-RDSVTFNALLTGYSKEGFNREAINLFFK 289

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M+  G    +FTF +ILTA   +   +FG QVHG ++   F  NV+V +AL+D Y+K   
Sbjct: 290 MQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDR 349

Query: 286 LDSARRLL-EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
           +  A +L  E  E+D  +S+N ++  +A  G  KE+L LFK++        +F + ++L+
Sbjct: 350 VVEASKLFYEMPEVDG-ISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLS 408

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
             A +++L+  + +HS  + T       V N+L+DMYAK G    A  +F+ +  +  + 
Sbjct: 409 IAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVP 468

Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
           WT++I+     G +E+ LK F +M+ + I  D    +SI+ ACA L  L  G+Q+H+  +
Sbjct: 469 WTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHII 528

Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ 524
            SG  S++   ++LV +YAKCG I DA ++F  M  R+ ++W ALI   AQNG G   L+
Sbjct: 529 GSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLR 588

Query: 525 FYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLL 584
            +++M+  G +PD ++ + +L ACSH GL E    YF+SM ++Y + P  +HYA  ID+L
Sbjct: 589 LFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDML 648

Query: 585 GRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM-NAMPY 643
            R G+  EA+ L+ QM  EPD  +W ++L++C +H + EL ++AAN LF ++ + +A PY
Sbjct: 649 CRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPY 708

Query: 644 VQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIY 703
           V +SN+Y+ AG+W++  +V+K M+ RG++K P  SWVE   + H+F + D+ HP   +I 
Sbjct: 709 VTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIM 768

Query: 704 SKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIF 763
            K+DE+   + + GY PD + ALHNV+EE K   L YHSE++A+AF L++ P+G+PI + 
Sbjct: 769 KKLDELEEKMVKKGYKPDSSCALHNVDEEVKVESLKYHSERIAIAFALISTPEGSPILVM 828

Query: 764 KNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           KNLR C DCH A+K IS +  R I +RDS+RFHHF+ G C+C DYW
Sbjct: 829 KNLRACTDCHAAIKVISKIVRREITVRDSSRFHHFRDGFCTCRDYW 874



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 191/416 (45%), Gaps = 39/416 (9%)

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
           N    P        ++A      V   I+ +GF  N Y  + L+  + + GDL+ AR+L 
Sbjct: 65  NNIIKPCTRNLVTTLTAPKPHLHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLF 124

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD---------------------- 331
           +     N  S N+MI+G+ + G   EA +LF  M  R                       
Sbjct: 125 DEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFG 184

Query: 332 ---------IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYA 382
                    I  D  +  ++L+ F     +N  + VHS ++K G++    V+N+L+D Y 
Sbjct: 185 LFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYC 244

Query: 383 KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
           K  +L  AF +FN + ++D +++ +L+TG +  G   EA+  F  M+  G  P     ++
Sbjct: 245 KTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAA 304

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
           IL+A  +L  +EFGQQVH   +K     ++ V N+L+  Y+K   + +A+++F  M   D
Sbjct: 305 ILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVD 364

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL-FACSHAGLAENARWYF 561
            I++  L+   A NG+ KE+L+ + ++   G       F  LL  A     L    + + 
Sbjct: 365 GISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHS 424

Query: 562 ESM--DKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
           +++  D +  I  G      ++D+  + G+  EA  +   +  +  +  W A++S+
Sbjct: 425 QTIVTDAISEILVGNS----LVDMYAKCGEFGEANRIFSDLAIQ-SSVPWTAMISS 475



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 68/299 (22%), Positives = 110/299 (36%), Gaps = 79/299 (26%)

Query: 395 NLMQDKDVIS-WTSLI----TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE 449
           N +   D I  WT +I    T   + GS +  L       I   C  ++V +        
Sbjct: 27  NYLNKNDSIKVWTCVICLIFTNAGHFGSKQYELTLSLMNNIIKPCTRNLVTT-------- 78

Query: 450 LTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR---------------- 493
           LT  +    V A  +K+G   +    N LV  + + G +N A +                
Sbjct: 79  LTAPKPHLHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTM 138

Query: 494 ---------------VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDY 538
                          +FDSM  R  +TWT LI G AQN + +EA   + +M   G  PD+
Sbjct: 139 IMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDH 198

Query: 539 ITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLD 598
           ++   LL     +G  E     F+S+++V  +          +  LG    L+ + +LLD
Sbjct: 199 VSLATLL-----SGFTE-----FDSVNEVRQVHS-------HVIKLGYDSTLVVSNSLLD 241

Query: 599 QM---------------VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
                            + E D+  + ALL+     G       A N  F+++ +   P
Sbjct: 242 SYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEG---FNREAINLFFKMQEVGYRP 297


>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
 gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 868

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 277/742 (37%), Positives = 446/742 (60%), Gaps = 8/742 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
            +++  Y      ++ +K+F+E   +N  TW++LI GY+   ++ E   LF +MQ EG +
Sbjct: 132 TSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQ 191

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+ +T    L + + +G+  RG Q H   +K   D    V   L+++Y KC  + +A  L
Sbjct: 192 PNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARIL 251

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F    + K+ V W +MI+GY+ NG   +A+  F  MR+  V  ++ +F S++  CA +  
Sbjct: 252 FDK-TEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKE 310

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKC-GDLDSARRLLEYSEIDNEVSWNSMIV 309
             F  Q+H  ++  GF  +  +++AL+  Y+KC   LD+ R   E   + N VSW +MI 
Sbjct: 311 LRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMIS 370

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           GF +    +EA+ LF +M  + ++ ++FTY  +L      + + +   VH+ +VKT +E 
Sbjct: 371 GFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA----LPVISPSEVHAQVVKTNYER 426

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
              V  AL+D Y K G ++ A  VF+ + DKD+++W++++ G A  G  E A+K F ++ 
Sbjct: 427 SSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELT 486

Query: 430 ISGICPDHVVVSSILSACAELTV-LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
             GI P+    SSIL+ CA     +  G+Q H   +KS   SSL V ++L+ +YAK G I
Sbjct: 487 KGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNI 546

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
             A  VF     +D+++W ++I G AQ+G+  +AL  + +M  R  K D +TF+G+  AC
Sbjct: 547 ESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAAC 606

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           +HAGL E    YF+ M +   I P  +H +CM+DL  R+G+L +A  +++ M     +T+
Sbjct: 607 THAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTI 666

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           W+ +L+ACRVH   ELG  AA  +  ++P ++  YV LSNMY+ +G W++ A+VRKLM  
Sbjct: 667 WRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNE 726

Query: 669 RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHN 728
           R ++KEPG SW+E  ++ + F++ DR HPL+  IY K++++   +K+ GY PD ++ L +
Sbjct: 727 RNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQD 786

Query: 729 VEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHII 788
           +++E KE  LA HSE+LA+AFGL+  P+G+P+ I KNLRVCGDCH  +K I+ +  R I+
Sbjct: 787 IDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIV 846

Query: 789 LRDSNRFHHFKA-GNCSCGDYW 809
           +RDSNRFHHF + G CSCGD+W
Sbjct: 847 VRDSNRFHHFSSDGVCSCGDFW 868



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 157/549 (28%), Positives = 280/549 (51%), Gaps = 19/549 (3%)

Query: 79  NSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDN 138
           +S RL  A  LF+++P ++  ++ SL++G+S  G   EA  LF  +   G         +
Sbjct: 39  SSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSS 98

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           VL++ +       G Q H   IK  F  +  V T LVD Y K     +   +F    + +
Sbjct: 99  VLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKE-R 157

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           N V WTT+I+GY++N    + +  F  M+ EG + N FTF + L   A       G QVH
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 217

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
             ++ +G +  + V ++LI++Y KCG++  AR L + +E+ + V+WNSMI G+A  G   
Sbjct: 218 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 277

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           EAL +F  M    +++ + ++ SV+   A+  +L   + +H  +VK GF   + +  AL+
Sbjct: 278 EALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALM 337

Query: 379 DMYAK-QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
             Y+K    LD   +   +    +V+SWT++I+G   +   EEA+  FS+M+  G+ P+ 
Sbjct: 338 VAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNE 397

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
              S IL+A   ++  E    VHA  +K+    S +V  +L+  Y K G + +A +VF  
Sbjct: 398 FTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSG 453

Query: 498 MHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC--SHAGLAE 555
           +  +D++ W+A++ G AQ G+ + A++ + ++   G KP+  TF  +L  C  ++A + +
Sbjct: 454 IDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQ 513

Query: 556 NARWYFESMDKVYGIKPGPDHYAC----MIDLLGRSGKLIEAKALLDQMVGEPDATVWKA 611
             +++       + IK   D   C    ++ +  + G +  A+ +  +   E D   W +
Sbjct: 514 GKQFHG------FAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ-REKDLVSWNS 566

Query: 612 LLSACRVHG 620
           ++S    HG
Sbjct: 567 MISGYAQHG 575



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 228/442 (51%), Gaps = 10/442 (2%)

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           ++ A  LF   P G++  ++ +++ G+S++G   +A   F ++   G+E +   F S+L 
Sbjct: 43  LYNAHNLFDKSP-GRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLK 101

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
             A +    FG Q+H   +  GF  +V V ++L+D Y K  +    R++ +  +  N V+
Sbjct: 102 VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVT 161

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           W ++I G+AR   + E L+LF +M     + + FT+ + L   A          VH+++V
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVV 221

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K G +    V+N+LI++Y K GN+  A ++F+  + K V++W S+I+G A +G   EAL 
Sbjct: 222 KNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALG 281

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            F  MR++ +       +S++  CA L  L F +Q+H   +K G     ++  +L++ Y+
Sbjct: 282 MFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYS 341

Query: 484 KCGCINDANRVFDSMH-TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
           KC  + DA R+F  +    +V++WTA+I G  QN   +EA+  + +M  +G +P+  T+ 
Sbjct: 342 KCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYS 401

Query: 543 GLLFACSHAGLAE-NARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
            +L A      +E +A+    + ++   +         ++D   + GK+ EA  +    +
Sbjct: 402 VILTALPVISPSEVHAQVVKTNYERSSTVG------TALLDAYVKLGKVEEAAKVFSG-I 454

Query: 602 GEPDATVWKALLSACRVHGDLE 623
            + D   W A+L+     G+ E
Sbjct: 455 DDKDIVAWSAMLAGYAQTGETE 476



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 135/245 (55%), Gaps = 11/245 (4%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            Q+ +   +R       ++ AY   G++ EA K+F+    K+   WS+++ GY+  G   
Sbjct: 417 AQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETE 476

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLC-SLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
            A ++F ++   G +P+++T  ++L +C +    + +G+QFHG+AIK+  D +  V + L
Sbjct: 477 AAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSAL 536

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           + MYAK   I  AE +FK   + K+ V+W +MI+GY+Q+G   KA++ F++M+   V+ +
Sbjct: 537 LTMYAKKGNIESAEEVFKRQRE-KDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMD 595

Query: 235 QFTFPSILTACAAVSARDFGAQ-----VHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
             TF  +  AC      + G +     V  C ++   E N    S ++D+Y++ G L+ A
Sbjct: 596 GVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHN----SCMVDLYSRAGQLEKA 651

Query: 290 RRLLE 294
            +++E
Sbjct: 652 MKVIE 656



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 31/168 (18%), Positives = 70/168 (41%), Gaps = 32/168 (19%)

Query: 43  LVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWS 102
           L  ++  G I+ A ++F++  ++D  +WN+MI+ YA  G+                    
Sbjct: 537 LTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQA------------------- 577

Query: 103 SLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT 162
                       ++A ++F +M+    +    T   V   C+  GL++ GE++    ++ 
Sbjct: 578 ------------MKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRD 625

Query: 163 C-FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
           C         + +VD+Y++   + +A  + +  P+      W T++  
Sbjct: 626 CKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAA 673


>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
 gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1064

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 285/744 (38%), Positives = 440/744 (59%), Gaps = 1/744 (0%)

Query: 66   DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
            D +  N +++ Y + G L  A+ +F+    ++  T+++LI G S  G   +A ELF +M 
Sbjct: 322  DTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH 381

Query: 126  LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            L+G  P   TL +++  CS  G L RG+Q H Y  K  F  N  +   L+++YAKC  I 
Sbjct: 382  LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADI- 440

Query: 186  EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            E    + +  + +N V W  M+  Y        +   FR M++E +  NQ+T+PSIL  C
Sbjct: 441  ETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 500

Query: 246  AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
              +   + G Q+H  I+ + F+ N YV S LIDMYAK G LD+A  +L      + VSW 
Sbjct: 501  IRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWT 560

Query: 306  SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
            +MI G+ +  F  +AL+ F++M  R I+ D+    + ++  A    L   + +H+    +
Sbjct: 561  TMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS 620

Query: 366  GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
            GF       NAL+ +Y++ G ++ +++ F   +  D I+W +L++G    G+ EEAL+ F
Sbjct: 621  GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVF 680

Query: 426  SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
              M   GI  ++    S + A +E   ++ G+QVHAV  K+G  S   V N+L+ +YAKC
Sbjct: 681  VRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKC 740

Query: 486  GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
            G I+DA + F  + T++ ++W A+I   +++G G EAL  +DQM+    +P+++T VG+L
Sbjct: 741  GSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVL 800

Query: 546  FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
             ACSH GL +    YFESM+  YG+ P P+HY C++D+L R+G L  AK  + +M  +PD
Sbjct: 801  SACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPD 860

Query: 606  ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
            A VW+ LLSAC VH ++E+GE AA++L ELEP ++  YV LSN+Y+ + KW+     R+ 
Sbjct: 861  ALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQK 920

Query: 666  MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFA 725
            MK +G++KEPG SW+E  + +H F   D+ HPL  +I+    ++     E GYV D    
Sbjct: 921  MKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSL 980

Query: 726  LHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLR 785
            L+ ++ E K+  +  HSEKLA++FGLL+LP   PI + KNLRVC DCH  +K++S V  R
Sbjct: 981  LNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNR 1040

Query: 786  HIILRDSNRFHHFKAGNCSCGDYW 809
             II+RD+ RFHHF+ G CSC DYW
Sbjct: 1041 EIIVRDAYRFHHFEGGACSCKDYW 1064



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 163/592 (27%), Positives = 283/592 (47%), Gaps = 16/592 (2%)

Query: 46  FSNSGEIDEAGQLFEKMS----DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTW 101
              +G +DE  +L  ++     D +G     +   Y   G L  A K+F+E P +  FTW
Sbjct: 95  LKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTW 154

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL-LQRGEQFHGYAI 160
           + +I   ++  L  E F LF +M  E   P++ T   VL  C    +     EQ H   +
Sbjct: 155 NKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIL 214

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG---KNHVAWTTMITGYSQNGYGF 217
                 +  V   L+D+Y++   +  A  +F    DG   K+H +W  MI+G S+N    
Sbjct: 215 YQGLRDSTVVCNPLIDLYSRNGFVDLARRVF----DGLRLKDHSSWVAMISGLSKNECEA 270

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           +AI  F DM V G+    + F S+L+AC  + + + G Q+HG +L  GF ++ YV +AL+
Sbjct: 271 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALV 330

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
            +Y   G+L SA  +       + V++N++I G ++ G+ ++A+ LFK+MH   ++ D  
Sbjct: 331 SLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSN 390

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           T  S++   +++  L   + +H+   K GF     +  AL+++YAK  +++ A   F   
Sbjct: 391 TLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET 450

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
           + ++V+ W  ++           + + F  M+I  I P+     SIL  C  L  LE G+
Sbjct: 451 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 510

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
           Q+H+  +K+    +  V + L+ +YAK G ++ A  +      +DV++WT +I G  Q  
Sbjct: 511 QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 570

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSH-AGLAENARWYFESMDKVYGIKPGPDH 576
              +AL  + QML RG + D +     + AC+    L E  + + ++   V G       
Sbjct: 571 FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC--VSGFSSDLPF 628

Query: 577 YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
              ++ L  R GK+ E+    +Q     D   W AL+S  +  G+ E   R 
Sbjct: 629 QNALVTLYSRCGKIEESYLAFEQTEA-GDNIAWNALVSGFQQSGNNEEALRV 679



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 134/291 (46%), Gaps = 18/291 (6%)

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
           C  +N  L+  + +HS I+K G +    ++  L D Y  +G+L  AF VF+ M ++ + +
Sbjct: 94  CLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFT 153

Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV-LEFGQQVHAVF 463
           W  +I   A      E    F  M    + P+    S +L AC   +V  +  +Q+HA  
Sbjct: 154 WNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARI 213

Query: 464 LKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEAL 523
           L  G   S  V N L+ +Y++ G ++ A RVFD +  +D  +W A+I G ++N    EA+
Sbjct: 214 LYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAI 273

Query: 524 QFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPG--PDHYAC 579
           + +  M   G  P    F  +L AC             E  ++++G  +K G   D Y C
Sbjct: 274 RLFCDMYVLGIMPTPYAFSSVLSACKKIE-------SLEIGEQLHGLVLKLGFSSDTYVC 326

Query: 580 --MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
             ++ L    G LI A+ +   M  + DA  +  L++     G    GE+A
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNM-SQRDAVTYNTLINGLSQCG---YGEKA 373



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 155/376 (41%), Gaps = 47/376 (12%)

Query: 36  ASDL---NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE 92
           +SDL   N  +  +S  G+I+E+   FE+    D   WN +++ +  SG         NE
Sbjct: 623 SSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGN--------NE 674

Query: 93  TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
                                  EA  +F +M  EG   + +T  + ++  S    +++G
Sbjct: 675 -----------------------EALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQG 711

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
           +Q H    KT +D    V   L+ MYAKC  I +AE  F +    KN V+W  +I  YS+
Sbjct: 712 KQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQF-LEVSTKNEVSWNAIINAYSK 770

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVY 271
           +G+G +A++ F  M    V  N  T   +L+AC+ +   D G      + S  G      
Sbjct: 771 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPE 830

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMIVGFARQGFHKE-ALSLFKKMHA 329
               ++DM  + G L  A+  ++   I  + + W +++        HK   +  F   H 
Sbjct: 831 HYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACV---VHKNMEIGEFAAHHL 887

Query: 330 RDIKIDD-FTYPSVLNCFASNI-----DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK 383
            +++ +D  TY  + N +A +      DL   K     + K   + +  V N++   Y  
Sbjct: 888 LELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVG 947

Query: 384 QGNLDCAFMVFNLMQD 399
             N   A  +    QD
Sbjct: 948 DQNHPLADEIHEYFQD 963


>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 300/809 (37%), Positives = 475/809 (58%), Gaps = 40/809 (4%)

Query: 39   LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSG--RLREAKKLFNETPF 95
            +  AL+D ++ SGEI++A + F++M +++  +W ++I+ YA  G   +  A+ +F+E   
Sbjct: 277  MGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRH 336

Query: 96   KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLL-QRGEQ 154
            +N  +WS+++ GY   GL  EA  LF QM   G  P+ + + +++  CS  G +   G Q
Sbjct: 337  RNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQ 396

Query: 155  FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
             HG+ +KT    + +V T LV  Y     ++ A+ LF+  PD  N V+WT+++ GYS +G
Sbjct: 397  VHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPD-HNVVSWTSLMVGYSDSG 455

Query: 215  YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQS 274
               + +  ++ MR EGV  NQ TF ++ ++C  +  +  G QV G I+  GFE +V V +
Sbjct: 456  NPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVAN 515

Query: 275  ALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKI 334
            +LI M++    ++ A  + ++    + +SWN+MI  +A  G  +E+L  F  M     + 
Sbjct: 516  SLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNET 575

Query: 335  DDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVF 394
            +  T  S+L+  +S  +L   + +H L+VK G +    + N L+ +Y++ G  + A +VF
Sbjct: 576  NSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVF 635

Query: 395  NLMQDKDVISWTS----------------------------------LITGCAYHGSYEE 420
              M ++D+ISW S                                  LI G A +    E
Sbjct: 636  QAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNE 695

Query: 421  ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
            A+K +  +R  GI  +++ + S L+A A L VLE GQQ+H + +K G  S L V N+ + 
Sbjct: 696  AVKAYKLIREKGIPANYITMVS-LAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMD 754

Query: 481  VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
            +Y KCG ++D  ++      R  ++W  LI   A++G  ++A + + +ML  G KPD++T
Sbjct: 755  MYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVT 814

Query: 541  FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
            FV LL AC+H GL +    Y++SM + +G+ PG +H  C+IDLLGRSG+L  A+  + +M
Sbjct: 815  FVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEM 874

Query: 601  VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAA 660
               P+   W++LL+ACR+HG+LEL  + A +L EL+P +   YV  SN+ +T+GKWED  
Sbjct: 875  PVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVE 934

Query: 661  RVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
             +RK M S  I+K+P CSWV+   +VH F   ++ HP  + I +K+ E+M + KEAGYVP
Sbjct: 935  NLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVP 994

Query: 721  DMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYIS 780
            D +FALH+++EE KE  L  HSE+LA+AFGL+  P+ + +RIFKNLRVCGDCH+  K++S
Sbjct: 995  DTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVS 1054

Query: 781  AVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             +  R I+LRD  RFHHF  G CSCGDYW
Sbjct: 1055 GIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1083



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 163/689 (23%), Positives = 283/689 (41%), Gaps = 141/689 (20%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +I  Y   G +  A+ +F+  P ++  +W++++ GYS  G   +AF LF  M+  G + +
Sbjct: 71  LIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKAN 130

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
                                                    LVD ++KC  + +A YLF 
Sbjct: 131 H---------------------------------------ALVDFHSKCGKMEDASYLFG 151

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
              + ++ V+W  MI GY+  G+   +   FR M   G+  + +T  S+L A A      
Sbjct: 152 TMME-RDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLI 210

Query: 253 FGAQVHGCILSSGFEA---------NVYVQS----------------------------- 274
              Q+HG I   G+ +         N Y ++                             
Sbjct: 211 IANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYA 270

Query: 275 ---------ALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF--------- 316
                    ALIDMYAK G+++ A+R  +  E  N +SW S+I G+A+ G+         
Sbjct: 271 HEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYV 330

Query: 317 ------------------------HKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNID 351
                                   ++EA+ LF +M    ++ + F   S++  C  S   
Sbjct: 331 FDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYM 390

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
            +    VH  +VKTG  G  +V  AL+  Y   G +  A  +F  M D +V+SWTSL+ G
Sbjct: 391 ADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVG 450

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
            +  G+  E L  +  MR  G+  +    +++ S+C  L     G QV    ++ G   S
Sbjct: 451 YSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDS 510

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
           +SV NSL+ +++    + +A  VFD M+  D+I+W A+I   A +G  +E+L+ +  M  
Sbjct: 511 VSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRH 570

Query: 532 RGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPGPDHYACMIDLL----- 584
              + +  T        S     +N +W       ++G  +K G D   C+ + L     
Sbjct: 571 LHNETNSTTLS---SLLSVCSSVDNLKW----GRGIHGLVVKLGLDSNVCICNTLLTLYS 623

Query: 585 --GRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
             GRS    E   L+ Q + E D   W ++++     G    G +    L ++   + + 
Sbjct: 624 EAGRS----EDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKPDRVT 679

Query: 643 YVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
           +  L   ++   +  +A +  KL++ +GI
Sbjct: 680 WNALIGGHAENEEPNEAVKAYKLIREKGI 708



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 149/354 (42%), Gaps = 71/354 (20%)

Query: 324 FKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK 383
            K + +   ++D   Y  +L              +H+ ++  GF     +N  LI  Y K
Sbjct: 18  LKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVK 77

Query: 384 QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSI 443
            G++  A  VF+ M ++ V+SWT++++G + +G +E+A   FSDMR  G+  +H      
Sbjct: 78  VGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANH------ 131

Query: 444 LSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDV 503
                                            +LV  ++KCG + DA+ +F +M  RDV
Sbjct: 132 ---------------------------------ALVDFHSKCGKMEDASYLFGTMMERDV 158

Query: 504 ITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFES 563
           ++W A+I G A  G   ++   +  ML  G  PD  T   +L A +  G    A      
Sbjct: 159 VSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIA------ 212

Query: 564 MDKVYGI--KPGPDHYACMIDLL----GRSGKLIEAKALLDQMVGEPDATVWKALLSACR 617
            ++++GI  + G   Y  +  LL     ++G L  AK L   M+ + D     AL++   
Sbjct: 213 -NQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGML-KKDLFSSTALITGYA 270

Query: 618 VHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
             G   +G             NA     L +MY+ +G+ EDA R    M+ + +
Sbjct: 271 HEGIYTMG-------------NA-----LIDMYAKSGEIEDAKRAFDEMEEKNV 306


>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
 gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
          Length = 723

 Score =  563 bits (1452), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 286/720 (39%), Positives = 444/720 (61%), Gaps = 7/720 (0%)

Query: 96  KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
           ++  +WS+LI  Y+N     EA   F+ M   G+ P++Y    V R CS K  +  G+  
Sbjct: 5   RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64

Query: 156 HGYAIKTC-FDLNAFVVTGLVDMYAKCKCIFEAEY-LFKMFPDGKNHVAWTTMITGYSQN 213
            G+ +KT  F+ +  V   L+DM+ K     E+ Y +F   PD +N V WT MIT + Q 
Sbjct: 65  FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPD-RNVVTWTLMITRFQQL 123

Query: 214 GYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
           G+   A++ F DM + G   ++FT   +++ACA +     G Q H  ++ SG + +V V 
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVG 183

Query: 274 SALIDMYAKC---GDLDSARRLLEYSEIDNEVSWNSMIVGFARQG-FHKEALSLFKKMHA 329
            +L+DMYAKC   G +D AR++ +   + N +SW ++I G+ + G   +EA+ LF +M  
Sbjct: 184 CSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQ 243

Query: 330 RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDC 389
             +K + FT+ SVL   A+  D+   + V++L+VK        V N+LI MY++ GN++ 
Sbjct: 244 GQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMEN 303

Query: 390 AFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE 449
           A   F+++ +K+++S+ +++   A   + EEA + F+++  +G   +    +S+LS  + 
Sbjct: 304 ARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASS 363

Query: 450 LTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTAL 509
           +  +  G+Q+H+  LKSG  S+L + N+L+ +Y++CG I  A +VF+ M   +VI+WT++
Sbjct: 364 IGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSM 423

Query: 510 IMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG 569
           I G A++G    AL+ + +ML  G  P+ +T++ +L ACSH GL      +F+SM   +G
Sbjct: 424 ITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHG 483

Query: 570 IKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAA 629
           I P  +HYAC++DLLGRSG L EA  L++ M  + DA V +  L ACRVHG+++LG+ AA
Sbjct: 484 IVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAA 543

Query: 630 NNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIF 689
             + E +P +   Y+ LSN++++AG+WE+ A +RK MK R + KE GCSW+E  ++VH F
Sbjct: 544 EMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKVHKF 603

Query: 690 ISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAF 749
              D  HP   +IY ++D++ L IKE GY+P  +F LH+VEEE KE  L  HSEK+AVA+
Sbjct: 604 YVGDTSHPQAQEIYDELDQLALKIKELGYIPSTDFVLHDVEEEQKEQYLFQHSEKIAVAY 663

Query: 750 GLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           G ++     PIR+FKNLRVCGDCHTA KY S V  + I+LRD+NRFHHFK G CSC DYW
Sbjct: 664 GFISTSTSRPIRVFKNLRVCGDCHTAFKYFSIVRRKEIVLRDANRFHHFKDGTCSCNDYW 723



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 153/454 (33%), Positives = 251/454 (55%), Gaps = 10/454 (2%)

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
           +G L  A K+F+  P +N  TW+ +I  +   G   +A +LF  M L GY P ++TL  V
Sbjct: 92  NGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGV 151

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC---KCIFEAEYLFKMFPD 196
           +  C+  GLL  G QFH   +K+  DL+  V   LVDMYAKC     + +A  +F   P 
Sbjct: 152 VSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPV 211

Query: 197 GKNHVAWTTMITGYSQN-GYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGA 255
             N ++WT +ITGY Q+ G   +AIE F +M    V+ N FTF S+L ACA +S    G 
Sbjct: 212 -HNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGE 270

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           QV+  ++     +   V ++LI MY++CG++++AR+  +     N VS+N+++  +A+  
Sbjct: 271 QVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSL 330

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
             +EA  LF ++      ++ FT+ S+L+  +S   +   + +HS I+K+GF+    + N
Sbjct: 331 NSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICN 390

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
           ALI MY++ GN++ AF VFN M D +VISWTS+ITG A HG    AL+ F  M  +G+ P
Sbjct: 391 ALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSP 450

Query: 436 DHVVVSSILSACAELTVLEFG-QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           + V   ++LSAC+ + ++  G +   ++ ++ G    +     +V +  + G + +A  +
Sbjct: 451 NEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMEL 510

Query: 495 FDSMHTR-DVITWTALIMGCAQNGK---GKEALQ 524
            +SM  + D +     +  C  +G    GK A +
Sbjct: 511 VNSMPFKADALVLRTFLGACRVHGNMDLGKHAAE 544



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 221/434 (50%), Gaps = 10/434 (2%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY-SNYGLDIEAFELFWQMQLEGYRP 131
           M A     G + +A+K+F+  P  N  +W+++I GY  + G D EA ELF +M     +P
Sbjct: 189 MYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKP 248

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
           + +T  +VL+ C+    +  GEQ +   +K        V   L+ MY++C  +  A   F
Sbjct: 249 NHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAF 308

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
            +  + KN V++ T++  Y+++    +A E F ++   G   N FTF S+L+  +++ A 
Sbjct: 309 DVLFE-KNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAI 367

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
             G Q+H  IL SGF++N+++ +ALI MY++CG++++A ++       N +SW SMI GF
Sbjct: 368 GKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGF 427

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGY 370
           A+ GF   AL  F KM    +  ++ TY +VL+ C    +     K   S+ V+ G    
Sbjct: 428 AKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPR 487

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGSYEEALKYFSDMR 429
                 ++D+  + G+L+ A  + N M  K D +   + +  C  HG+ +   K+ ++M 
Sbjct: 488 MEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLG-KHAAEMI 546

Query: 430 ISGICPD---HVVVSSILSACAEL-TVLEFGQQVHAVFL-KSGGCSSLSVDNSLVLVYAK 484
           +     D   ++++S++ ++  +   V E  +++    L K  GCS + V+N +   Y  
Sbjct: 547 LEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKVHKFYVG 606

Query: 485 CGCINDANRVFDSM 498
                 A  ++D +
Sbjct: 607 DTSHPQAQEIYDEL 620



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 121/224 (54%), Gaps = 2/224 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N++I+ Y+  G +  A+K F+    KN  ++++++  Y+      EAFELF +++  G  
Sbjct: 289 NSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTG 348

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            + +T  ++L   S  G + +GEQ H   +K+ F  N  +   L+ MY++C  I  A  +
Sbjct: 349 VNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQV 408

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F    DG N ++WT+MITG++++G+  +A+E F  M   GV  N+ T+ ++L+AC+ V  
Sbjct: 409 FNEMGDG-NVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGL 467

Query: 251 RDFGAQVHGCI-LSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
              G +    + +  G    +   + ++D+  + G L+ A  L+
Sbjct: 468 ISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELV 511


>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  563 bits (1451), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 290/751 (38%), Positives = 452/751 (60%), Gaps = 8/751 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNET-PFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           D  T N++I+ Y+  G+  +A  +F      ++  +WS+++  ++N  +   A   F  M
Sbjct: 100 DSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDM 159

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCF-DLNAFVVTGLVDMYAKCKC 183
              GY P++Y      R CS    +  G+   G+ +KT +   +  V  GL+DM+ K + 
Sbjct: 160 IENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRG 219

Query: 184 -IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            +  A  +F+  P+ +N V WT MIT   Q GY  +AI+ F +M + G E ++FT   ++
Sbjct: 220 DLVSAFKVFEKMPE-RNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVI 278

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC---GDLDSARRLLEYSEID 299
           +ACA +     G Q+H   +  G   +  V   LI+MYAKC   G + +AR++ +     
Sbjct: 279 SACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDH 338

Query: 300 NEVSWNSMIVGFARQG-FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
           N  SW +MI G+ ++G + +EAL LF+ M    +  + FT+ S L   A+   L   + V
Sbjct: 339 NVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQV 398

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
            +  VK GF     V N+LI MYA+ G +D A   F+++ +K++IS+ ++I   A + + 
Sbjct: 399 FTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNS 458

Query: 419 EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSL 478
           EEAL+ F+++   G+       +S+LS  A +  +  G+Q+HA  +KSG   + SV N+L
Sbjct: 459 EEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNAL 518

Query: 479 VLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDY 538
           + +Y++CG I  A +VF+ M  R+VI+WT++I G A++G   +AL+ + +ML  G +P+ 
Sbjct: 519 ISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNL 578

Query: 539 ITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLD 598
           +T++ +L ACSH GL      +F+SM   +G+ P  +HYACM+D+LGRSG L EA   ++
Sbjct: 579 VTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFIN 638

Query: 599 QMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWED 658
            M  + DA VW+  L ACRVHG+LELG+ AA  + E EP +   Y+ LSN+Y++  KW++
Sbjct: 639 SMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDE 698

Query: 659 AARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGY 718
            + +RK MK + + KE GCSWVE  ++VH F   D  HP   +IY ++  + + IK+ GY
Sbjct: 699 VSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGY 758

Query: 719 VPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKY 778
           VP+++F LH+VEEE KE  L  HSEK+AVAFGL++  +  PIR+FKNLR+CGDCH+A+KY
Sbjct: 759 VPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKY 818

Query: 779 ISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           IS    R II+RD+NRFHH K G CSC +YW
Sbjct: 819 ISMATGREIIVRDANRFHHIKDGRCSCNEYW 849



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 193/416 (46%), Gaps = 16/416 (3%)

Query: 194 FPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDF 253
           FP   N    T  +     NG   KAI     M  +G   +  T+   L  C    + D 
Sbjct: 25  FPTFTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDI 84

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE-VSWNSMIVGFA 312
           G  VH  +  S  + +    ++LI +Y+KCG  + A  + +      + +SW++M+  FA
Sbjct: 85  GTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFA 144

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF-EGYK 371
                  AL  F  M       +++ + +     ++   ++   S+   +VKTG+ +   
Sbjct: 145 NNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDV 204

Query: 372 FVNNALIDMYAK-QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
            V   LIDM+ K +G+L  AF VF  M +++ ++WT +IT     G   EA+  F +M +
Sbjct: 205 CVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMIL 264

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC---GC 487
           SG  PD   +S ++SACA + +L  GQQ+H+  ++ G      V   L+ +YAKC   G 
Sbjct: 265 SGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGS 324

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGK-GKEALQFYDQMLARGTKPDYITFVGLLF 546
           +  A ++FD +   +V +WTA+I G  Q G   +EAL  +  M+     P++ TF   L 
Sbjct: 325 MCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLK 384

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYAC----MIDLLGRSGKLIEAKALLD 598
           AC++          F      + +K G     C    +I +  RSG++ +A+   D
Sbjct: 385 ACANLAALRIGEQVF-----THAVKLGFSSVNCVANSLISMYARSGRIDDARKAFD 435



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 135/276 (48%), Gaps = 34/276 (12%)

Query: 20  IGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYA 78
           IG   +TH V       + +  +L+  ++ SG ID+A + F+ + +++  ++NT+I AYA
Sbjct: 394 IGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYA 453

Query: 79  NSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDN 138
            +    EA +LFNE                               ++ +G   S +T  +
Sbjct: 454 KNLNSEEALELFNE-------------------------------IEDQGMGASAFTFAS 482

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           +L   +  G + +GEQ H   IK+   LN  V   L+ MY++C  I  A  +F+   D +
Sbjct: 483 LLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMED-R 541

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           N ++WT++ITG++++G+  +A+E F  M  EGV  N  T+ ++L+AC+ V   + G +  
Sbjct: 542 NVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHF 601

Query: 259 GCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLL 293
             + +  G    +   + ++D+  + G L  A + +
Sbjct: 602 KSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFI 637



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 77/336 (22%), Positives = 149/336 (44%), Gaps = 22/336 (6%)

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
           L++    N       ++     G   +A+S  + M  +    D  TY   L         
Sbjct: 23  LQFPTFTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSF 82

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM-QDKDVISWTSLITG 411
           +    VH  + ++  +      N+LI +Y+K G  + A  +F LM   +D+ISW+++++ 
Sbjct: 83  DIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSC 142

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
            A +     AL  F DM  +G  P+    ++   AC+    +  G  +    +K+G   S
Sbjct: 143 FANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQS 202

Query: 472 -LSVDNSLVLVYAKC-GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
            + V   L+ ++ K  G +  A +VF+ M  R+ +TWT +I    Q G   EA+  + +M
Sbjct: 203 DVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEM 262

Query: 530 LARGTKPDYITFVGLLFACSH-------AGLAENARWYFESMDKVYGIKPGPDHYACMID 582
           +  G +PD  T  G++ AC++         L   A  +  ++D+  G         C+I+
Sbjct: 263 ILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVG--------CCLIN 314

Query: 583 LLGR---SGKLIEAKALLDQMVGEPDATVWKALLSA 615
           +  +    G +  A+ + DQ++ + +   W A+++ 
Sbjct: 315 MYAKCSVDGSMCAARKIFDQIL-DHNVFSWTAMITG 349


>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Brachypodium distachyon]
          Length = 814

 Score =  562 bits (1448), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 306/792 (38%), Positives = 458/792 (57%), Gaps = 14/792 (1%)

Query: 29  VGNSVKPAS-DLNRALVDFSNSGEIDEAGQLFEKMSDRD-GFTWNTMIAAYANSGRLREA 86
           V     PA+  LN  L    +SG + +A  LF++M  R+  F+ N M++ Y+ SG+L  A
Sbjct: 26  VKTGFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSGQLSAA 85

Query: 87  KKLFNETP--FKNFFTWSSLIYGYSNY--GLDIEAFELFWQMQLEGYRPSQYTLDNVLRL 142
             LF  +P   ++  TW+ +I  +++       +A  LF  M  EG  P + T+  VL L
Sbjct: 86  HHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVATVLNL 145

Query: 143 CSLKGLLQRG---EQFHGYAIKT-CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
               G           H +A+K      N  V   L+D Y K   +  A  +F+  P  +
Sbjct: 146 PPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPH-R 204

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           + V +  M+ G S+ G   +A++ F  MR +G+ + +FTF ++LT    V     G QVH
Sbjct: 205 DSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVH 264

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL-EYSEIDNEVSWNSMIVGFARQGFH 317
           G +++    +NV+V ++L+D Y+KC  LD  ++L  E  E DN VS+N MI G+A     
Sbjct: 265 G-LVARATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDN-VSYNVMIAGYAWNRCA 322

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
              L LF++M +         Y S+L+   S   +   K +H+ +V  G      V NAL
Sbjct: 323 SIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNAL 382

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           IDMY+K G LD A   F    DK  +SWT++ITGC  +G  EEAL+ F  MR +G+ PD 
Sbjct: 383 IDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDR 442

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
              SS + A + L ++  G+Q+H+  ++SG  SS+   ++L+ +Y KCGC+++A + FD 
Sbjct: 443 ATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDE 502

Query: 498 MHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENA 557
           M  R+ I+W A+I   A  G+ K A++ ++ ML  G KPD +TF+ +L ACSH GLAE  
Sbjct: 503 MPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEEC 562

Query: 558 RWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACR 617
             YFE M+  YGI P  +HY+C+ID LGR G+  + + +L +M  E D  +W ++L +CR
Sbjct: 563 MKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCR 622

Query: 618 VHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGC 677
            HG+ +L   AA  LF +   +A PYV LSN+++ AGKWEDAA V+K+M+ RG+RKE G 
Sbjct: 623 THGNQDLARVAAEKLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGY 682

Query: 678 SWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIG 737
           SWVE   +V+ F S D+ +P+ T+I  +++ +   + + GY PD +  L  V+++ K   
Sbjct: 683 SWVEVKHKVYSFSSNDQTNPMITEIKDELERLYKEMDKQGYKPDTSCTLQQVDDDIKLES 742

Query: 738 LAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHH 797
           L YHSE+LA+AF L+  P G PIR+ KNL  C DCH+A+K +S +  R II+RDS+RFHH
Sbjct: 743 LKYHSERLAIAFALINTPPGTPIRVMKNLSACVDCHSAIKMMSKIVNRDIIVRDSSRFHH 802

Query: 798 FKAGNCSCGDYW 809
           FK G CSCGDYW
Sbjct: 803 FKDGFCSCGDYW 814


>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score =  562 bits (1448), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 287/766 (37%), Positives = 438/766 (57%), Gaps = 37/766 (4%)

Query: 45  DFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSL 104
           +F  +GE+ +A QLFEKM  ++  + N MI+ Y  SG L EA+KLF+    +   TW+ L
Sbjct: 56  NFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTIL 115

Query: 105 IYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCF 164
           I GYS      EAFELF QMQ  G  P   T   +L  C+   +  +  Q     IK  +
Sbjct: 116 IGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGY 175

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
           D    V   LVD Y K   +  A  LFK  P                             
Sbjct: 176 DSRLIVGNTLVDSYCKSNRLDLACQLFKEMP----------------------------- 206

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
                  E + FTF ++L A   +     G Q+H  ++ + F  NV+V +AL+D Y+K  
Sbjct: 207 -------EIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHD 259

Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
            +  AR+L +     + VS+N +I G+A  G HK A  LF+++         F + ++L+
Sbjct: 260 SVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLS 319

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
             ++ +D    + +H+  + T  +    V N+L+DMYAK G  + A M+F  +  +  + 
Sbjct: 320 IASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVP 379

Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
           WT++I+     G YEE L+ F+ MR + +  D    +S+L A A +  L  G+Q+H+  +
Sbjct: 380 WTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFII 439

Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ 524
           KSG  S++   ++L+ VYAKCG I DA + F  M  R++++W A+I   AQNG+ +  L+
Sbjct: 440 KSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLK 499

Query: 525 FYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLL 584
            + +M+  G +PD ++F+G+L ACSH+GL E   W+F SM ++Y + P  +HYA ++D+L
Sbjct: 500 SFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDML 559

Query: 585 GRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM-NAMPY 643
            RSG+  EA+ L+ +M  +PD  +W ++L+ACR+H + EL  RAA+ LF +E + +A PY
Sbjct: 560 CRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPY 619

Query: 644 VQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIY 703
           V +SN+Y+ AG+WE+ ++V K M+ RG++K P  SWVE   + H+F + DR HP   +I 
Sbjct: 620 VNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIR 679

Query: 704 SKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIF 763
            KID +   ++E GY PD + ALHN +E+ K   L YHSE+LA+AF L++ P+G+PI + 
Sbjct: 680 KKIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVM 739

Query: 764 KNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           KNLR C DCH A+K IS +  R I +RDS RFHHF+ G CSCGD+W
Sbjct: 740 KNLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 785



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 189/388 (48%), Gaps = 35/388 (9%)

Query: 39  LNRALVDF-SNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           ++ AL+DF S    + +A +LF++M ++DG ++N +I+ YA  G+               
Sbjct: 247 VSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGK--------------- 291

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                   + Y        AF+LF ++Q   +   Q+    +L + S     + G Q H 
Sbjct: 292 --------HKY--------AFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHA 335

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
             I T  D    V   LVDMYAKC    EAE +F      ++ V WT MI+ Y Q G+  
Sbjct: 336 QTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTH-RSAVPWTAMISAYVQKGFYE 394

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           + ++ F  MR   V ++Q TF S+L A A++++   G Q+H  I+ SGF +NV+  SAL+
Sbjct: 395 EGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALL 454

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
           D+YAKCG +  A +  +     N VSWN+MI  +A+ G  +  L  FK+M    ++ D  
Sbjct: 455 DVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSV 514

Query: 338 TYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
           ++  VL+ C  S +        +S+      +  +    +++DM  + G  + A  +   
Sbjct: 515 SFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAE 574

Query: 397 MQ-DKDVISWTSLITGCAYHGSYEEALK 423
           M  D D I W+S++  C  H + E A +
Sbjct: 575 MPIDPDEIMWSSVLNACRIHKNQELARR 602



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 107/463 (23%), Positives = 176/463 (38%), Gaps = 105/463 (22%)

Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG----- 315
           I+ +GF+ +    +  +  + K G+L  AR+L E     N VS N MI G+ + G     
Sbjct: 38  IVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEA 97

Query: 316 --------------------------FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
                                       KEA  LF +M     + D  T+ ++L+    +
Sbjct: 98  RKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGH 157

Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS----- 404
              N    V + I+K G++    V N L+D Y K   LD A  +F  M + D  +     
Sbjct: 158 EMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVL 217

Query: 405 -------------------------WTSLITGC-----AYHGSYEEALKYFSDMRISGIC 434
                                    W   ++       + H S  +A K F +M      
Sbjct: 218 CANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGV 277

Query: 435 PDHVVVS-------------------------------SILSACAELTVLEFGQQVHAVF 463
             +V++S                               ++LS  +     E G+Q+HA  
Sbjct: 278 SYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQT 337

Query: 464 LKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEAL 523
           + +   S + V NSLV +YAKCG   +A  +F ++  R  + WTA+I    Q G  +E L
Sbjct: 338 IVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGL 397

Query: 524 QFYDQMLARGTKPDYITFVGLLFA-CSHAGLAENARWYFESMDKVYGIKPGPDHYACMID 582
           Q +++M       D  TF  LL A  S A L+   + +  S     G        + ++D
Sbjct: 398 QLFNKMRQASVIADQATFASLLRASASIASLSLGKQLH--SFIIKSGFMSNVFSGSALLD 455

Query: 583 LLGRSGKLIEAKALLDQMVGEPDATV--WKALLSACRVHGDLE 623
           +  + G + +A     +M   PD  +  W A++SA   +G+ E
Sbjct: 456 VYAKCGSIKDAVQTFQEM---PDRNIVSWNAMISAYAQNGEAE 495



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 87/356 (24%), Positives = 147/356 (41%), Gaps = 50/356 (14%)

Query: 347 ASNIDLNNAKSVHSLIVKTGFE------GYKFVN-------------------------N 375
           +  + LN   ++ + IVKTGF+       ++  N                         N
Sbjct: 23  SPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTN 82

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
            +I  Y K GNL  A  +F+ M ++  ++WT LI G +    ++EA + F  M+  G  P
Sbjct: 83  MMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEP 142

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           D+V   ++LS C    +     QV    +K G  S L V N+LV  Y K   ++ A ++F
Sbjct: 143 DYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLF 202

Query: 496 DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI--TFVG---LLFACSH 550
             M   D  T+ A++  CA    G + +    Q+ +   K +++   FV    L F   H
Sbjct: 203 KEMPEIDSFTFAAVL--CA--NIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKH 258

Query: 551 AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM---VGEPDAT 607
             + + AR  F+ M +  G+      Y  +I      GK   A  L  ++     +    
Sbjct: 259 DSVID-ARKLFDEMPEQDGVS-----YNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQF 312

Query: 608 VWKALLSACRVHGDLELGERA-ANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
            +  +LS      D E+G +  A  +        +    L +MY+  GK+E+A  +
Sbjct: 313 PFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMI 368


>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 289/735 (39%), Positives = 432/735 (58%), Gaps = 65/735 (8%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK-------CKC-------- 183
           +L+LC       + +  H + IKT      F++  L+  YAK       CK         
Sbjct: 15  LLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPN 74

Query: 184 ----------------IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM- 226
                           + E EYLF   P  ++ V+W ++I+GY+  G  +++++ +  M 
Sbjct: 75  LYSWNTILSAYSKLGRVSEMEYLFDAMPR-RDGVSWNSLISGYAGCGLIYQSVKAYNLML 133

Query: 227 RVEG-VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK--- 282
           + +G    N+ TF ++L   +       G Q+HG ++  GF + V+V S L+DMY+K   
Sbjct: 134 KNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGM 193

Query: 283 ----------------------------CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
                                       CG ++ ++RL       + +SW SMI GF + 
Sbjct: 194 ISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQN 253

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
           G  ++A+ +F++M   ++++D +T+ SVL      + L   K VH+ I++T ++   FV 
Sbjct: 254 GLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVA 313

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           +AL+DMY K  N+  A  VF  M  K+V+SWT+++ G   +G  EEA+K FSDM+  GI 
Sbjct: 314 SALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIE 373

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           PD   + S++S+CA L  LE G Q HA  L SG  S ++V N+LV +Y KCG I D++R+
Sbjct: 374 PDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRL 433

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
           F+ +  +D +TWTAL+ G AQ GK  E +  ++ MLA G KPD +TF+G+L ACS AGL 
Sbjct: 434 FNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLV 493

Query: 555 ENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
           E     FESM   +GI P  DHY CMIDL  R+G++ EA+  +++M   PDA  W  LLS
Sbjct: 494 EKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLS 553

Query: 615 ACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
           +CR +G++++G+ AA  L EL+P N   YV LS++Y+  GKWE+ AR+RK M+ +G+RKE
Sbjct: 554 SCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKE 613

Query: 675 PGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGK 734
           PGCSW++  +QVH+F ++D+ +P    IYS+++++   + + GYVPDMN  LH+V +  K
Sbjct: 614 PGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVGDSEK 673

Query: 735 EIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNR 794
              L +HSEKLA+AFGLL +P G PIR+ KNLRVC DCH A KYIS +  R I++RD+ R
Sbjct: 674 IKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITNREILVRDTAR 733

Query: 795 FHHFKAGNCSCGDYW 809
           FH FK G CSCGD+W
Sbjct: 734 FHLFKDGTCSCGDFW 748



 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 163/534 (30%), Positives = 282/534 (52%), Gaps = 39/534 (7%)

Query: 39  LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF 98
           LN  +  ++  G I  A ++F++M   + ++WNT+++AY+  GR+ E + LF+  P ++ 
Sbjct: 47  LNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDG 106

Query: 99  FTWSSLIYGYSNYGL---DIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
            +W+SLI GY+  GL    ++A+ L  +     +  ++ T   +L L S +G ++ G Q 
Sbjct: 107 VSWNSLISGYAGCGLIYQSVKAYNLMLKND-GSFNLNRITFSTLLILASKRGCVKLGRQI 165

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG------------------ 197
           HG+ +K  F    FV + LVDMY+K   I  A  +F   P+                   
Sbjct: 166 HGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRV 225

Query: 198 ------------KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
                       ++ ++WT+MITG++QNG    AI+ FR+M++E ++ +Q+TF S+LTAC
Sbjct: 226 EDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTAC 285

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
             V A   G QVH  I+ + ++ N++V SAL+DMY KC ++ SA  + +     N VSW 
Sbjct: 286 GGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWT 345

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +M+VG+ + G+ +EA+  F  M    I+ DDFT  SV++  A+   L      H+  + +
Sbjct: 346 AMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTS 405

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G   +  V+NAL+ +Y K G+++ +  +FN +  KD ++WT+L++G A  G   E +  F
Sbjct: 406 GLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLF 465

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LVLVYAK 484
             M   G+ PD V    +LSAC+   ++E G Q+    +   G   +    + ++ ++++
Sbjct: 466 ESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSR 525

Query: 485 CGCINDANRVFDSM-HTRDVITWTALIMGCAQNGK---GKEALQFYDQMLARGT 534
            G I +A    + M  + D I+W  L+  C   G    GK A +F  ++    T
Sbjct: 526 AGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNT 579



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 115/274 (41%), Gaps = 64/274 (23%)

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV----- 393
           Y ++L       +   AK++HS I+KT      F+ N LI  YAK G++  A  V     
Sbjct: 12  YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71

Query: 394 --------------------------FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
                                     F+ M  +D +SW SLI+G A  G   +++K ++ 
Sbjct: 72  HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNL 131

Query: 428 M--RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK- 484
           M         + +  S++L   ++   ++ G+Q+H   +K G  S + V + LV +Y+K 
Sbjct: 132 MLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKM 191

Query: 485 ------------------------------CGCINDANRVFDSMHTRDVITWTALIMGCA 514
                                         CG + D+ R+F  M  RD I+WT++I G  
Sbjct: 192 GMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFT 251

Query: 515 QNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
           QNG  ++A+  + +M     + D  TF  +L AC
Sbjct: 252 QNGLDRDAIDIFREMKLENLQMDQYTFGSVLTAC 285



 Score = 46.2 bits (108), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 64/310 (20%), Positives = 119/310 (38%), Gaps = 68/310 (21%)

Query: 442 SILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV------- 494
           ++L  C E       + +H+  +K+       + N+L+  YAK G I  A +V       
Sbjct: 14  ALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHP 73

Query: 495 ------------------------FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
                                   FD+M  RD ++W +LI G A  G   ++++ Y+ ML
Sbjct: 74  NLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLML 133

Query: 531 AR--GTKPDYITFVGLLFACSHAGLAENARWY------FESMDKVYGIKPGPDHYACMID 582
                   + ITF  LL   S  G  +  R        F  M  V+   P       ++D
Sbjct: 134 KNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSP-------LVD 186

Query: 583 LLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           +  + G +  A+ + D++  E +  ++  L+      G +E  +R     FE+   +++ 
Sbjct: 187 MYSKMGMISCARKVFDEL-PEKNVVMYNTLIMGLMRCGRVEDSKRL---FFEMRERDSIS 242

Query: 643 YVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEP-----------GCSWVETNSQVHIFIS 691
           +  +   ++  G   DA  + + MK   ++ +            G   ++   QVH +I 
Sbjct: 243 WTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYI- 301

Query: 692 EDRGHPLRTD 701
                 +RTD
Sbjct: 302 ------IRTD 305


>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 291/751 (38%), Positives = 451/751 (60%), Gaps = 8/751 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNET-PFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           D  T N++I+ Y+  G+  +A  +F      ++  +WS+++  ++N  +   A   F  M
Sbjct: 100 DSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDM 159

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCF-DLNAFVVTGLVDMYAKCKC 183
              GY P++Y      R CS    +  G+   G+ IKT +   +  V  GL+DM+ K + 
Sbjct: 160 IENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRG 219

Query: 184 -IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            +  A  +F+  P+ +N V WT MIT   Q GY  +AI+ F DM   G E ++FT   ++
Sbjct: 220 DLVSAFKVFEKMPE-RNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVI 278

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC---GDLDSARRLLEYSEID 299
           +ACA +     G Q+H   +  G   +  V   LI+MYAKC   G + +AR++ +     
Sbjct: 279 SACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDH 338

Query: 300 NEVSWNSMIVGFARQG-FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
           N  SW +MI G+ ++G + +EAL LF+ M    +  + FT+ S L   A+   L   + V
Sbjct: 339 NVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQV 398

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
            +  VK GF     V N+LI MYA+ G +D A   F+++ +K++IS+ ++I   A + + 
Sbjct: 399 FTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNS 458

Query: 419 EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSL 478
           EEAL+ F+++   G+       +S+LS  A +  +  G+Q+HA  +KSG   + SV N+L
Sbjct: 459 EEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNAL 518

Query: 479 VLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDY 538
           + +Y++CG I  A +VF+ M  R+VI+WT++I G A++G   +AL+ + +ML  G +P+ 
Sbjct: 519 ISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNE 578

Query: 539 ITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLD 598
           +T++ +L ACSH GL      +F+SM   +G+ P  +HYAC++D+LGRSG L EA   ++
Sbjct: 579 VTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFIN 638

Query: 599 QMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWED 658
            M  + DA VW+  L ACRVHG+LELG+ AA  + E EP +   Y+ LSN+Y++  KW++
Sbjct: 639 SMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDE 698

Query: 659 AARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGY 718
            + +RK MK + + KE GCSWVE  ++VH F   D  HP   +IY ++  + + IK+ GY
Sbjct: 699 VSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGY 758

Query: 719 VPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKY 778
           VP+++F LH+VEEE KE  L  HSEK+AVAFGL++  +  PIR+FKNLR+CGDCH+A+KY
Sbjct: 759 VPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKY 818

Query: 779 ISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           IS    R II+RD+NRFHH K G CSC +YW
Sbjct: 819 ISMATGREIIVRDANRFHHIKDGRCSCNEYW 849



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 194/418 (46%), Gaps = 20/418 (4%)

Query: 194 FPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDF 253
           FP   N    T  +     NG   KAI     M  +G   +  T+   L  C    + D 
Sbjct: 25  FPTFTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDI 84

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR---RLLEYSEIDNEVSWNSMIVG 310
           G  VH  +  S  + +    ++LI +Y+KCG  + A    RL+  S   + +SW++M+  
Sbjct: 85  GTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSR--DLISWSAMVSC 142

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF-EG 369
           FA       AL  F  M       +++ + +     ++   ++   S+   ++KTG+ + 
Sbjct: 143 FANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQS 202

Query: 370 YKFVNNALIDMYAK-QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
              V   LIDM+ K +G+L  AF VF  M +++ ++WT +IT     G   EA+  F DM
Sbjct: 203 DVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDM 262

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC--- 485
             SG  PD   +S ++SACA + +L  GQQ+H+  ++ G      V   L+ +YAKC   
Sbjct: 263 IFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVD 322

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGK-GKEALQFYDQMLARGTKPDYITFVGL 544
           G +  A ++FD +   +V +WTA+I G  Q G   +EAL  +  M+     P++ TF   
Sbjct: 323 GSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSST 382

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC----MIDLLGRSGKLIEAKALLD 598
           L AC++          F      + +K G     C    +I +  RSG++ +A+   D
Sbjct: 383 LKACANLAALRIGEQVF-----THAVKLGFSSVNCVANSLISMYARSGRIDDARKAFD 435



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 137/278 (49%), Gaps = 38/278 (13%)

Query: 20  IGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYA 78
           IG   +TH V       + +  +L+  ++ SG ID+A + F+ + +++  ++NT+I AYA
Sbjct: 394 IGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYA 453

Query: 79  NSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDN 138
            +    EA +LFNE                               ++ +G   S +T  +
Sbjct: 454 KNLNSEEALELFNE-------------------------------IEDQGMGASAFTFAS 482

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD-- 196
           +L   +  G + +GEQ H   IK+   LN  V   L+ MY++C  I   E  F++F D  
Sbjct: 483 LLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNI---ESAFQVFEDME 539

Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
            +N ++WT++ITG++++G+  +A+E F  M  EGV  N+ T+ ++L+AC+ V   + G +
Sbjct: 540 DRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWK 599

Query: 257 VHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLL 293
               + +  G    +   + ++D+  + G L  A + +
Sbjct: 600 HFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFI 637



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/336 (22%), Positives = 148/336 (44%), Gaps = 22/336 (6%)

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
           L++    N       ++     G   +A+S  + M  +    D  TY   L         
Sbjct: 23  LQFPTFTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSF 82

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM-QDKDVISWTSLITG 411
           +    VH  + ++  +      N+LI +Y+K G  + A  +F LM   +D+ISW+++++ 
Sbjct: 83  DIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSC 142

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
            A +     AL  F DM  +G  P+    ++   AC+    +  G  +    +K+G   S
Sbjct: 143 FANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQS 202

Query: 472 -LSVDNSLVLVYAKC-GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
            + V   L+ ++ K  G +  A +VF+ M  R+ +TWT +I    Q G   EA+  +  M
Sbjct: 203 DVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDM 262

Query: 530 LARGTKPDYITFVGLLFACSH-------AGLAENARWYFESMDKVYGIKPGPDHYACMID 582
           +  G +PD  T  G++ AC++         L   A  +  ++D+  G         C+I+
Sbjct: 263 IFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVG--------CCLIN 314

Query: 583 LLGR---SGKLIEAKALLDQMVGEPDATVWKALLSA 615
           +  +    G +  A+ + DQ++ + +   W A+++ 
Sbjct: 315 MYAKCSVDGSMCAARKIFDQIL-DHNVFSWTAMITG 349


>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
 gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 868

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 287/797 (36%), Positives = 446/797 (55%), Gaps = 42/797 (5%)

Query: 54  EAGQLFEKMSDR-----DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY 108
           E G++  K  D      D +  N++I  Y+    +  A+++F     ++  TWSS+I  Y
Sbjct: 73  EDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAY 132

Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA 168
           +      +AF+ F +M      P++ T  ++L+ C+   +L++G + H        + + 
Sbjct: 133 AGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDV 192

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
            V T L+ MY+KC  I  A  +F    + +N V+WT +I   +Q+    +A E +  M  
Sbjct: 193 AVATALITMYSKCGEISVACEVFHKMTE-RNVVSWTAIIQANAQHRKLNEAFELYEQMLQ 251

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
            G+  N  TF S+L +C    A + G ++H  I   G E ++ V +ALI MY KC  +  
Sbjct: 252 AGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQE 311

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFH-----KEALSLFKKMHARDIKIDDFTYPSVL 343
           AR + +     + +SW++MI G+A+ G+       E   L ++M    +  +  T+ S+L
Sbjct: 312 AREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSIL 371

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVI 403
               ++  L   + +H+ + K GFE  + +  A+ +MYAK G++  A  VF+ M +K+V+
Sbjct: 372 RACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVV 431

Query: 404 SWTS-------------------------------LITGCAYHGSYEEALKYFSDMRISG 432
           +WTS                               +I G A +G   +  +  S M+  G
Sbjct: 432 AWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEG 491

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
             PD V V +IL AC  L  LE G+ VHA  +K G  S   V  SL+ +Y+KCG + +A 
Sbjct: 492 FQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEAR 551

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
            VFD M  RD + W A++ G  Q+G G EA+  + +ML     P+ IT   ++ ACS AG
Sbjct: 552 TVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAG 611

Query: 553 LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
           L +  R  F  M + + + P   HY CM+DLLGR+G+L EA+  +  M  EPD +VW AL
Sbjct: 612 LVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHAL 671

Query: 613 LSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIR 672
           L AC+ H +++L ERAA+++ ELEP  A  Y+ LSN+Y+ AG+W+D+ +VR++M  RG++
Sbjct: 672 LGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLK 731

Query: 673 KEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEE 732
           K+ G S +E + ++H F++ED  HP    I+++++ +   +KEAGY PDM F LH+V++ 
Sbjct: 732 KDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPDMRFVLHDVDDV 791

Query: 733 GKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDS 792
            KE  L +HSEKLA+A+GLL  P G PIRI KNLRVCGDCHTA K+IS +  R I+ RD+
Sbjct: 792 QKEKALCHHSEKLAIAYGLLKTPSGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDA 851

Query: 793 NRFHHFKAGNCSCGDYW 809
           NRFH+F  G CSCGD+W
Sbjct: 852 NRFHYFNNGTCSCGDFW 868



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 169/590 (28%), Positives = 279/590 (47%), Gaps = 42/590 (7%)

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA +L   ++  G   +  T   V+  C+     + G+  H    +   +++ ++   L+
Sbjct: 39  EAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLI 98

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           + Y+K + +  AE +F+     ++ V W++MI  Y+ N +  KA + F  M    +E N+
Sbjct: 99  NFYSKFEDVASAEQVFRRMT-LRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNR 157

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            TF SIL AC   S  + G ++H  + + G E +V V +ALI MY+KCG++  A  +   
Sbjct: 158 ITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHK 217

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               N VSW ++I   A+     EA  L+++M    I  +  T+ S+LN   +   LN  
Sbjct: 218 MTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRG 277

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           + +HS I + G E    V NALI MY K  ++  A  +F+ M  +DVISW+++I G A  
Sbjct: 278 RRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQS 337

Query: 416 G-----SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
           G     S +E  +    MR  G+ P+ V   SIL AC     LE G+Q+HA   K G   
Sbjct: 338 GYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFEL 397

Query: 471 SLSVDNSLVLVYAKCGCI-------------------------------NDANRVFDSMH 499
             S+  ++  +YAKCG I                               + A +VF  M 
Sbjct: 398 DRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMP 457

Query: 500 TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC-SHAGLAENAR 558
           TR+V++W  +I G AQNG   +  +    M A G +PD +T + +L AC + AGL     
Sbjct: 458 TRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKL 517

Query: 559 WYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRV 618
            + E++    G++        +I +  + G++ EA+ + D+M    D   W A+L+    
Sbjct: 518 VHAEAVK--LGLESDTVVATSLIGMYSKCGQVAEARTVFDKM-SNRDTVAWNAMLAGYGQ 574

Query: 619 HGD-LELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
           HGD LE  +     L E    N +    + +  S AG  ++   + ++M+
Sbjct: 575 HGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQ 624



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 231/456 (50%), Gaps = 13/456 (2%)

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           +AI+    ++  G+  N  T+  ++  CA     + G  VH  +   G E ++Y+ ++LI
Sbjct: 39  EAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLI 98

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
           + Y+K  D+ SA ++     + + V+W+SMI  +A      +A   F++M   +I+ +  
Sbjct: 99  NFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRI 158

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           T+ S+L    +   L   + +H+++   G E    V  ALI MY+K G +  A  VF+ M
Sbjct: 159 TFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKM 218

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
            +++V+SWT++I   A H    EA + +  M  +GI P+ V   S+L++C     L  G+
Sbjct: 219 TERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGR 278

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
           ++H+   + G  + + V N+L+ +Y KC  + +A  +FD M  RDVI+W+A+I G AQ+G
Sbjct: 279 RIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSG 338

Query: 518 -KGKEAL----QFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKP 572
            K KE++    Q  ++M   G  P+ +TF+ +L AC+  G  E  R     + KV G + 
Sbjct: 339 YKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKV-GFEL 397

Query: 573 GPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNL 632
                  + ++  + G + EA+ +  +M  + +   W + LS     GDL   E+     
Sbjct: 398 DRSLQTAIFNMYAKCGSIYEAEQVFSKMANK-NVVAWTSFLSMYIKCGDLSSAEKV---F 453

Query: 633 FELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
            E+   N + +  +   Y+  G   D  +V +L+ S
Sbjct: 454 SEMPTRNVVSWNLMIAGYAQNG---DIVKVFELLSS 486



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 213/444 (47%), Gaps = 52/444 (11%)

Query: 25  YTHNVGNSVKPASDLNRALVDFSNSGE-IDEAGQLFEKMSDR----DGFTWNTMIAAYAN 79
           Y   +   + P +    +L++  N+ E ++   ++   +S+R    D    N +I  Y  
Sbjct: 246 YEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCK 305

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYG------LDIEAFELFWQMQLEGYRPSQ 133
              ++EA+++F+    ++  +WS++I GY+  G      +D E F+L  +M+ EG  P++
Sbjct: 306 CNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESID-EVFQLLERMRREGVFPNK 364

Query: 134 YTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF-- 191
            T  ++LR C+  G L++G Q H    K  F+L+  + T + +MYAKC  I+EAE +F  
Sbjct: 365 VTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSK 424

Query: 192 --------------------------KMFPD--GKNHVAWTTMITGYSQNGYGFKAIECF 223
                                     K+F +   +N V+W  MI GY+QNG   K  E  
Sbjct: 425 MANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELL 484

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
             M+ EG + ++ T  +IL AC A++  + G  VH   +  G E++  V ++LI MY+KC
Sbjct: 485 SSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKC 544

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
           G +  AR + +     + V+WN+M+ G+ + G   EA+ LFK+M    +  ++ T  +V+
Sbjct: 545 GQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVI 604

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA-----LIDMYAKQGNLDCAFMVFNLMQ 398
           +  +    +   + +  ++     E +K          ++D+  + G L  A      M 
Sbjct: 605 SACSRAGLVQEGREIFRMMQ----EDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMP 660

Query: 399 -DKDVISWTSLITGCAYHGSYEEA 421
            + D+  W +L+  C  H + + A
Sbjct: 661 CEPDISVWHALLGACKSHNNVQLA 684



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 191/406 (47%), Gaps = 55/406 (13%)

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
           + G  +EA+ L   +  R + ++  TY  V+   A      + K VH  + + G E   +
Sbjct: 33  KAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIY 92

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           + N+LI+ Y+K  ++  A  VF  M  +DV++W+S+I   A +    +A   F  M  + 
Sbjct: 93  LGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDAN 152

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
           I P+ +   SIL AC   ++LE G+++H +    G  + ++V  +L+ +Y+KCG I+ A 
Sbjct: 153 IEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVAC 212

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS--- 549
            VF  M  R+V++WTA+I   AQ+ K  EA + Y+QML  G  P+ +TFV LL +C+   
Sbjct: 213 EVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPE 272

Query: 550 --------HAGLAE------------------------NARWYFESMDKVYGIKPGPDHY 577
                   H+ ++E                         AR  F+ M K   I      +
Sbjct: 273 ALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVIS-----W 327

Query: 578 ACMIDLLGRSG-----KLIEAKALLDQMVGE---PDATVWKALLSACRVHGDLELGERAA 629
           + MI    +SG      + E   LL++M  E   P+   + ++L AC  HG LE G +  
Sbjct: 328 SAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIH 387

Query: 630 NNL----FELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
             L    FEL   +      + NMY+  G   +A +V   M ++ +
Sbjct: 388 AELSKVGFEL---DRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNV 430


>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 889

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 300/821 (36%), Positives = 469/821 (57%), Gaps = 76/821 (9%)

Query: 53  DEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYG 112
           D  G L   +++ +  T N M+  YA  G L +A++LF   P ++  +W++L+ GY   G
Sbjct: 81  DARGLLRGDITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSG 140

Query: 113 LDIEAFELFWQMQLEG-YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV 171
             ++A E F  M+  G   P+ +T    ++ C   G  +   Q  G   K  F  +  V 
Sbjct: 141 RFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVA 200

Query: 172 TGLVDMYAKCKCI------------------------FEAEY-------LFKMFPDGKNH 200
           TG+VDM+ +C  +                        +   Y       LF+  P+ ++ 
Sbjct: 201 TGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPE-RDV 259

Query: 201 VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
           V+W  M++  SQ+G   +A+    DM   GV  +  T+ S LTACA +S+  +G Q+H  
Sbjct: 260 VSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQ 319

Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEA 320
           ++ S    + YV SA++++YAKCG    ARR+       N VSW  +I GF + G   E+
Sbjct: 320 VIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSES 379

Query: 321 LSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDM 380
           L LF +M A  + +D F   ++++  ++ +D+  A+ +HSL +K+G      ++N+LI M
Sbjct: 380 LELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISM 439

Query: 381 YAKQGNLDCAFMVFNLMQDKDVISWTSLITG----------------------------- 411
           YAK GNL  A  +F+ M+++D++SWT ++T                              
Sbjct: 440 YAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAML 499

Query: 412 CAY--HGSYEEALKYFSDMRIS-GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
            AY  HG+ E+ LK +S M     + PD V   ++   CA++   + G Q+    +K G 
Sbjct: 500 GAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGL 559

Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
               SV N+++ +Y+KCG I++A ++FD +  +D+++W A+I G +Q+G GK+A++ +D 
Sbjct: 560 ILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDD 619

Query: 529 MLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSG 588
           ML +G KPDYI++V +L +CSH+GL +  ++YF+ + + + + PG +H++CM+DLL R+G
Sbjct: 620 MLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAG 679

Query: 589 KLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSN 648
            LIEAK L+D+M  +P A VW ALLSAC+ HG+ EL E AA +LF+L+  ++  Y+ L+ 
Sbjct: 680 NLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAK 739

Query: 649 MYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDE 708
           +Y+ AGK  D+A+VRKLM+ +GI+K PG SW+E  ++VH+F +ED  HP    I  K+DE
Sbjct: 740 IYADAGKSVDSAQVRKLMRDKGIKKNPGYSWMEVKNKVHVFKAEDVSHPQVIAIREKLDE 799

Query: 709 IMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRV 768
           +M  I + GYV          E    EI   +HSEKLAVAFG++ LP   PI I KNLR+
Sbjct: 800 LMEKIAQLGYV--------RTESLRSEI---HHSEKLAVAFGIMNLPAWMPIHIMKNLRI 848

Query: 769 CGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           CGDCHT +K IS V  R  ++RD+ RFHHFK G+CSCGDYW
Sbjct: 849 CGDCHTVIKLISTVTGREFVIRDAVRFHHFKGGSCSCGDYW 889



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 141/520 (27%), Positives = 245/520 (47%), Gaps = 36/520 (6%)

Query: 38  DLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK 96
           D+   +VD F   G +D A + F ++     F  N+M+A YA S  +  A +LF   P +
Sbjct: 198 DVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPER 257

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
           +  +W+ ++   S  G   EA  +   M   G R    T  + L  C+    L  G+Q H
Sbjct: 258 DVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLH 317

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
              I++   ++ +V + +V++YAKC C  EA  +F    D +N V+WT +I G+ Q G  
Sbjct: 318 AQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRD-RNTVSWTVLIGGFLQYGCF 376

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
            +++E F  MR E +  +QF   +I++ C+         Q+H   L SG    V + ++L
Sbjct: 377 SESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSL 436

Query: 277 IDMYAKCGDLDSARR----------------LLEYSEID---------------NEVSWN 305
           I MYAKCG+L +A                  L  YS++                N ++WN
Sbjct: 437 ISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWN 496

Query: 306 SMIVGFARQGFHKEALSLFKKM-HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           +M+  + + G  ++ L ++  M   +D+  D  TY ++    A          +    VK
Sbjct: 497 AMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVK 556

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            G      V NA+I MY+K G +  A  +F+ +  KD++SW ++ITG + HG  ++A++ 
Sbjct: 557 VGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEI 616

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYA 483
           F DM   G  PD++   ++LS+C+   +++ G+    +  +    S  L   + +V + A
Sbjct: 617 FDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLA 676

Query: 484 KCGCINDANRVFDSMHTRDVI-TWTALIMGCAQNGKGKEA 522
           + G + +A  + D M  +     W AL+  C  +G  + A
Sbjct: 677 RAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELA 716



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 153/605 (25%), Positives = 272/605 (44%), Gaps = 106/605 (17%)

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFD---------LNAFVVTG------------- 173
           L + LR C  +G L      HG  +              L+A++  G             
Sbjct: 31  LADALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDI 90

Query: 174 ----------LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
                     +++ YAK   + +AE LF   P  ++  +W T+++GY Q+G    A+E F
Sbjct: 91  TEPNVITHNIMMNGYAKLGSLSDAEELFGRMPR-RDVTSWNTLMSGYYQSGRFLDAMESF 149

Query: 224 RDMRVEGVE-SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK 282
             MR  G    N FTF   + +C A+   +   Q+ G +   GF+ +  V + ++DM+ +
Sbjct: 150 VSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVR 209

Query: 283 CGDLDSARRLLEYSEIDNE---------------------------------VSWNSMIV 309
           CG +D A +  ++S+I+                                   VSWN M+ 
Sbjct: 210 CGAVDFASK--QFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVS 267

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
             ++ G  +EALS+   MH R +++D  TY S L   A    L   K +H+ ++++    
Sbjct: 268 ALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCI 327

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
             +V +A++++YAK G    A  VF+ ++D++ +SWT LI G   +G + E+L+ F+ MR
Sbjct: 328 DPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMR 387

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
              +  D   +++I+S C+    +   +Q+H++ LKSG   ++ + NSL+ +YAKCG + 
Sbjct: 388 AELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQ 447

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR----------------- 532
           +A  +F SM  RD+++WT ++   +Q G   +A +F+D M  R                 
Sbjct: 448 NAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGA 507

Query: 533 ---GTK------------PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY 577
              G K            PD++T+V L   C+  G  +          KV G+       
Sbjct: 508 EEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKV-GLILDTSVM 566

Query: 578 ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEP 637
             +I +  + G++ EA+ + D  +   D   W A+++    HG   +G++A     ++  
Sbjct: 567 NAVITMYSKCGRISEARKIFD-FLSRKDLVSWNAMITGYSQHG---MGKQAIEIFDDMLK 622

Query: 638 MNAMP 642
             A P
Sbjct: 623 KGAKP 627



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 39/193 (20%)

Query: 29  VGNSVK-----PASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRL 83
            G++VK       S +N  +  +S  G I EA ++F+ +S +D  +WN MI  Y      
Sbjct: 551 TGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGY------ 604

Query: 84  REAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLC 143
                                    S +G+  +A E+F  M  +G +P   +   VL  C
Sbjct: 605 -------------------------SQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSC 639

Query: 144 SLKGLLQRGEQFHGYAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHV 201
           S  GL+Q G +F+   +K   +++  +   + +VD+ A+   + EA+ L    P      
Sbjct: 640 SHSGLVQEG-KFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAE 698

Query: 202 AWTTMITGYSQNG 214
            W  +++    +G
Sbjct: 699 VWGALLSACKTHG 711


>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 960

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 304/833 (36%), Positives = 465/833 (55%), Gaps = 81/833 (9%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF--KNFFTWSS 103
           +SN G   +A Q+F++   R+ FTWNTMI A  +S R+ +A+KLF+E P   K+  +W++
Sbjct: 53  YSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTT 112

Query: 104 LIYGYSNYGLDIEAFELFWQMQLE------GYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
           +I GYS  G    +FE F  M  +       Y P  +T  +V++ C   G  +   Q H 
Sbjct: 113 MISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFT--SVMKACGSLGDSRLAIQLHA 170

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCI-------------------------------FE 186
              K  F +   +   +V MY KC  +                               ++
Sbjct: 171 LVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYK 230

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A  +F   P+ ++ V+W T+I+ +SQ+G+G + +  F +M  +G   N  T+ S+L+ACA
Sbjct: 231 ALQIFNRMPE-RDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACA 289

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
           + S   +GA +H  IL      ++   + LIDMYAKCG LD A+R+ +     + +SWNS
Sbjct: 290 STSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNS 349

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           +I G    G  ++AL LF +M    + +D+F  P++L   +     +  + +H   +K+G
Sbjct: 350 LITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSG 409

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY-------- 418
                 V NA+I MYAK G+ D A +VF LM  ++ ISWT++IT  +  G          
Sbjct: 410 MGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFD 469

Query: 419 -----------------------EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
                                  EE LK +  MR +G+ PD +  ++ + ACA+L +++ 
Sbjct: 470 MMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKL 529

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
           G QV     K G   ++SV NS+V +Y++CG I +A   FDS+  +D+I+W A++   AQ
Sbjct: 530 GMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQ 589

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
           NG G + +  ++ ML    KP++I++V +L  CSH GL    + YF+SM +V+GI P  +
Sbjct: 590 NGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNE 649

Query: 576 HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
           H++CM+DLLGR+G L +AK L++ M  +P+ATVW ALL +CRVH DL L E AA  L EL
Sbjct: 650 HFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMEL 709

Query: 636 EPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG 695
           +   +  YV LSNMYS +G+ ++ A +RKLMK +GIR   GCSW+E +++VH+F  ++  
Sbjct: 710 DVEGSEGYVLLSNMYSESGELDNVADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETS 769

Query: 696 HPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLP 755
           HP   ++Y K++E+M +I++ G    +  ++H  ++        YHSEKLA AFGLL LP
Sbjct: 770 HPQIKEVYLKLEEMMKMIEDTGKYITVESSVHRSKK--------YHSEKLAFAFGLLNLP 821

Query: 756 QGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDY 808
              PI + KNLRVC DCH  +K +S V  R +I+RD  RFHHFK G CSC DY
Sbjct: 822 SWMPIHVMKNLRVCDDCHLVIKLLSLVTSRELIMRDGYRFHHFKDGICSCKDY 874



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 126/505 (24%), Positives = 221/505 (43%), Gaps = 89/505 (17%)

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCG-------------------------DLDSAR 290
           ++H  ++ SG ++++++ + L+ MY+ CG                          L S+ 
Sbjct: 29  KLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSS 88

Query: 291 RLLEYSEIDNE--------VSWNSMIVGFARQGFHKEALSLFKKMHARDI-----KIDDF 337
           R+ +  ++ +E        VSW +MI G+++ GFH  +   F  M  RD        D F
Sbjct: 89  RMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLM-IRDTNDGGKNYDPF 147

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDC-------- 389
           ++ SV+    S  D   A  +H+L+ K GF     + N+++ MY K G++D         
Sbjct: 148 SFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDI 207

Query: 390 -----------------------AFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
                                  A  +FN M ++D +SW +LI+  + HG   + L  F 
Sbjct: 208 ERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFV 267

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
           +M   G  P+ +   S+LSACA  + L++G  +HA  L+      L   N L+ +YAKCG
Sbjct: 268 EMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCG 327

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
           C++ A RVF S+   D I+W +LI G    G G++AL  ++QM       D      +L 
Sbjct: 328 CLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILG 387

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYA----CMIDLLGRSGKLIEAKALLDQMVG 602
            CS    A         +   Y IK G    A     +I +  + G   +A  L+ +++ 
Sbjct: 388 VCSGPDYASTGE-----LLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKAD-LVFRLMP 441

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFELEP-MNAMPYVQLSNMYSTAGKWEDAAR 661
             +   W A+++A    GD+      A   F++ P  N + +  + + Y   G  E+  +
Sbjct: 442 LRNTISWTAMITAFSRSGDIG----KARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLK 497

Query: 662 VRKLMKSRGIRKEPGCSWVETNSQV 686
           +   M+S G++ +    W+   + +
Sbjct: 498 LYVSMRSNGVQPD----WITFTTSI 518



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 155/331 (46%), Gaps = 4/331 (1%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  ++  G+ D+A  +F  M  R+  +W  MI A++ SG + +A+  F+  P +N  
Sbjct: 418 NAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIV 477

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           TW+S++  Y   G   E  +L+  M+  G +P   T    +R C+   +++ G Q   +A
Sbjct: 478 TWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHA 537

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
            K    LN  V   +V MY++C  I EA+  F    D K+ ++W  M+  ++QNG G K 
Sbjct: 538 TKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDD-KDLISWNAMLAAFAQNGLGIKV 596

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALID 278
           I+ F DM     + N  ++ S+L+ C+ +     G      +    G        S ++D
Sbjct: 597 IDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVD 656

Query: 279 MYAKCGDLDSARRLLEYSEID-NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
           +  + G L+ A+ L+E      N   W++++         + A +  KK+   D++  + 
Sbjct: 657 LLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSE- 715

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
            Y  + N ++ + +L+N   +  L+   G  
Sbjct: 716 GYVLLSNMYSESGELDNVADMRKLMKVKGIR 746



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 153/372 (41%), Gaps = 87/372 (23%)

Query: 332 IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
           ++I    Y +   C  ++   + A+ +H+ ++ +G +   F+ N L+ MY+  G    AF
Sbjct: 4   MQISQKFYDAFKQCSFTHKSPHIARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAF 63

Query: 392 MVF---------------------NLMQD------------KDVISWTSLITGCAYHGSY 418
            VF                     + M D            KD +SWT++I+G + +G +
Sbjct: 64  QVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFH 123

Query: 419 EEALKYFS----DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
             + + FS    D    G   D    +S++ AC  L       Q+HA+  K G      +
Sbjct: 124 SRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCI 183

Query: 475 DNSLVLVYAKCG------------------CIND-------------ANRVFDSMHTRDV 503
            NS+V +Y KCG                  C N              A ++F+ M  RD 
Sbjct: 184 QNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDE 243

Query: 504 ITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA-----GLAENAR 558
           ++W  LI   +Q+G G + L  + +M  +G  P+++T+  +L AC+       G   +AR
Sbjct: 244 VSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHAR 303

Query: 559 WYF--ESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSAC 616
                 S+D V+G          +ID+  + G L  AK +   +  E D   W +L++  
Sbjct: 304 ILRMEHSLDLVFG--------NGLIDMYAKCGCLDLAKRVFKSL-REHDHISWNSLITGV 354

Query: 617 RVHGDLELGERA 628
            VH    LGE A
Sbjct: 355 -VH--FGLGEDA 363



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 11/189 (5%)

Query: 454 EFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC 513
              +++HA  + SG  SSL + N+L+ +Y+ CG  +DA +VF   H R++ TW  +I   
Sbjct: 25  HIARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRAL 84

Query: 514 AQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY---GI 570
             + +  +A + +D+M  R    D +++  ++   S  G    +   F  M +     G 
Sbjct: 85  VSSSRMSDAEKLFDEMPVR--VKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGK 142

Query: 571 KPGPDHYACMIDL---LGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGER 627
              P  +  ++     LG S   I+  AL+ ++    +  +  +++      GD++L E 
Sbjct: 143 NYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAET 202

Query: 628 AANNLFELE 636
                F++E
Sbjct: 203 V---FFDIE 208


>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
 gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
          Length = 781

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 302/752 (40%), Positives = 455/752 (60%), Gaps = 8/752 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D F  NT+I  Y   G    A+KLF+E P +N  TW+ LI GY+  G+  +A  +  +
Sbjct: 32  DSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKE 91

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQR-GEQFHGYAIKTCF-DLNAFVVTGLVDMYAKC 181
           M  EG+ P+++   + +R C    L +R G Q HGYAI+T   D    V  GL++MYAKC
Sbjct: 92  MIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKC 151

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
             I  A  +F +  D K+ V+W +MITG  QN     A++ +  MR  G+  + F   S 
Sbjct: 152 GDIDHARSVFGLMVD-KDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISA 210

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           L++CA++     G Q HG  +  G + +V V + L+ +YA+   L   +++  +    ++
Sbjct: 211 LSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQ 270

Query: 302 VSWNSMIVGFARQGFH-KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
           VSWN++I   A  G    EA+ +F +M       +  T+ ++L   +S      +  +H+
Sbjct: 271 VSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHA 330

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGSYE 419
           LI+K   +    + NAL+  Y K G ++    +F+ M ++ D +SW S+I+G  ++    
Sbjct: 331 LILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLC 390

Query: 420 EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
           +A+     M   G   D    +++LSACA +  LE G +VHA  +++   S + + ++LV
Sbjct: 391 KAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALV 450

Query: 480 LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
            +Y+KCG I+ A+R F+ M  R++ +W ++I G A++G G  AL+ + +M   G  PD+I
Sbjct: 451 DMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHI 510

Query: 540 TFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ 599
           TFVG+L ACSH GL +    YF+SM +VYG+ P  +HY+CM+DLLGR+G+L + +  +++
Sbjct: 511 TFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINK 570

Query: 600 MVGEPDATVWKALLSA-CRVHG-DLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWE 657
           M  +P+  +W+ +L A CR +G   ELG RAA  LF ++P NA+ YV LSNMY++ GKWE
Sbjct: 571 MPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWE 630

Query: 658 DAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAG 717
           D AR R+ M+   ++KE GCSWV     VH+F++ D  HP +  IY+K+ E+   I++AG
Sbjct: 631 DMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKKIRDAG 690

Query: 718 YVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMK 777
           YVP + FAL+++E E KE  L+YHSEKLAVAF +LT   G PIRI KNLRVCGDCH+A K
Sbjct: 691 YVPQIKFALYDLEPENKEELLSYHSEKLAVAF-VLTRNSGLPIRIMKNLRVCGDCHSAFK 749

Query: 778 YISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           YIS V  R I+LRDSNRFHHF+ G CSC DYW
Sbjct: 750 YISKVVDRSIVLRDSNRFHHFEDGKCSCRDYW 781



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 195/368 (52%), Gaps = 5/368 (1%)

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           H  +L  GF++++++ + LI++Y + GD  SAR+L +     N V+W  +I G+ + G  
Sbjct: 23  HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKF-VNN 375
           ++A  + K+M       + F + S +  C  S +     + VH   ++TG    K  V N
Sbjct: 83  EDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGN 142

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
            LI+MYAK G++D A  VF LM DKD +SW S+ITG   +  +E+A+K ++ MR +G+ P
Sbjct: 143 GLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMP 202

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
            +  + S LS+CA L  +  GQQ H   +K G    +SV N+L+ +YA+   + +  +VF
Sbjct: 203 SNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVF 262

Query: 496 DSMHTRDVITWTALIMGCAQNGKG-KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
             M  RD ++W  +I   A +G    EA++ + +M+  G  P+ +TF+ LL   S    +
Sbjct: 263 SWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTS 322

Query: 555 ENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
           + +      + K Y +K        ++   G+SG++   + +  +M    D   W +++S
Sbjct: 323 KLSHQIHALILK-YNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMIS 381

Query: 615 ACRVHGDL 622
              +H +L
Sbjct: 382 G-YIHNEL 388



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 128/268 (47%), Gaps = 12/268 (4%)

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
           +A   H  ++K GF+   F+ N LI++Y + G+   A  +F+ M D++ ++W  LI+G  
Sbjct: 18  DANLFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYT 77

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF-GQQVHAVFLKSG-GCSS 471
            +G  E+A     +M   G  P+     S + AC E  +    G+QVH   +++G   + 
Sbjct: 78  QNGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAK 137

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
           ++V N L+ +YAKCG I+ A  VF  M  +D ++W ++I G  QN   ++A++ Y+ M  
Sbjct: 138 VAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRK 197

Query: 532 RGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA----CMIDLLGRS 587
            G  P     +  L +C+  G                GIK G D        ++ L   +
Sbjct: 198 TGLMPSNFALISALSSCASLGCI-----LLGQQTHGEGIKLGLDMDVSVSNTLLALYAET 252

Query: 588 GKLIEAKALLDQMVGEPDATVWKALLSA 615
            +L E + +   M+ E D   W  ++ A
Sbjct: 253 SRLAECQKVFSWML-ERDQVSWNTVIGA 279



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 107/262 (40%), Gaps = 28/262 (10%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK- 96
           +  ALVD +S  G ID A + F  M  R+ ++WN+MI+ YA  G    A +LF       
Sbjct: 445 IGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSG 504

Query: 97  ---NFFTWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
              +  T+  ++   S+ GL  E FE F  M ++ G  P       ++ L    G L + 
Sbjct: 505 QLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKI 564

Query: 153 EQF-HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE--AEYLFKMFPDGKNHVAWTTMITG 209
           E F +   IK    +   V+        +   +    AE LF M P  +N V +  +   
Sbjct: 565 ENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDP--QNAVNYVLLSNM 622

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
           Y+  G         R MR   V+            C+ V+ +D    VH  +  +G   N
Sbjct: 623 YASGGKWEDMARTRRAMREAAVKKE--------AGCSWVTMKD---GVH--VFVAG--DN 667

Query: 270 VYVQSALIDMYAKCGDLDSARR 291
            + +  LI  YAK  +LD   R
Sbjct: 668 SHPEKGLI--YAKLKELDKKIR 687


>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  559 bits (1441), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 300/745 (40%), Positives = 436/745 (58%), Gaps = 8/745 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL- 126
           F    ++  YAN G +  ++  F++ P K+ +TW+S+I  Y + G   EA   F+Q+ L 
Sbjct: 152 FISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLV 211

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
              RP  YT   VL+ C   G L  G + H +A K  F  N FV   L+ MY++      
Sbjct: 212 SEIRPDFYTFPPVLKAC---GTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGI 268

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A  LF   P  ++  +W  MI+G  QNG   +A++   +MR+EG++ N  T  SIL  C 
Sbjct: 269 ARSLFDDMP-FRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCP 327

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            +        +H  ++  G E +++V +ALI+MYAK G+L+ AR+  +   I + VSWNS
Sbjct: 328 QLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNS 387

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           +I  + +      A   F KM     + D  T  S+ +  A + D  N++SVH  I++ G
Sbjct: 388 IIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRG 447

Query: 367 FEGYKFV-NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           +     V  NA++DMYAK G LD A  VF ++  KDVISW +LITG A +G   EA++ +
Sbjct: 448 WLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVY 507

Query: 426 SDMR-ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
             M     I P+     SIL A A +  L+ G ++H   +K+     + V   L+ VY K
Sbjct: 508 KMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGK 567

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG + DA  +F  +     +TW A+I     +G  ++ L+ + +ML  G KPD++TFV L
Sbjct: 568 CGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSL 627

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L ACSH+G  E  +W F  M + YGIKP   HY CM+DLLGR+G L  A   +  M  +P
Sbjct: 628 LSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQP 686

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
           DA++W ALL ACR+HG++ELG+ A++ LFE++  N   YV LSN+Y+  GKWE   +VR 
Sbjct: 687 DASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRS 746

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
           L + RG++K PG S +E N +V +F + ++ HP   +IY ++  +   +K  GY+PD +F
Sbjct: 747 LARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSF 806

Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
            L +VEE+ KE  L  HSE+LA+AFG+++ P  +PIRIFKNLRVCGDCH A K+IS +  
Sbjct: 807 VLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQ 866

Query: 785 RHIILRDSNRFHHFKAGNCSCGDYW 809
           R I++RDSNRFHHFK G CSCGDYW
Sbjct: 867 REIVVRDSNRFHHFKDGICSCGDYW 891



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 184/365 (50%), Gaps = 5/365 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N +I  YA  G L +A+K F +    +  +W+S+I  Y      + A   F +MQ
Sbjct: 350 DLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQ 409

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV-TGLVDMYAKCKCI 184
           L G++P   TL ++  + +     +     HG+ ++  + +   V+   +VDMYAK   +
Sbjct: 410 LNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLL 469

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILT 243
             A  +F++    K+ ++W T+ITGY+QNG   +AIE ++ M   + +  NQ T+ SIL 
Sbjct: 470 DSAHKVFEIILV-KDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILP 528

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           A A V A   G ++HG ++ +    +V+V + LID+Y KCG L  A  L      ++ V+
Sbjct: 529 AYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVT 588

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN++I      G  ++ L LF +M    +K D  T+ S+L+  + +  +   K    L+ 
Sbjct: 589 WNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQ 648

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           + G +        ++D+  + G L+ A+  + ++    D   W +L+  C  HG+ E   
Sbjct: 649 EYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELG- 707

Query: 423 KYFSD 427
           K+ SD
Sbjct: 708 KFASD 712



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 180/374 (48%), Gaps = 25/374 (6%)

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
           F   +H  ++ +G   ++++ + L+++YA  GD+  +R   +     +  +WNSMI  + 
Sbjct: 134 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYV 193

Query: 313 RQGFHKEALSLFKK-MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
             G   EA+  F + +   +I+ D +T+P VL    + +D    + +H    K GF+   
Sbjct: 194 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHCWAFKLGFQWNV 250

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
           FV  +LI MY++ G    A  +F+ M  +D+ SW ++I+G   +G+  +AL    +MR+ 
Sbjct: 251 FVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 310

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
           GI  + V V SIL  C +L  +     +H   +K G    L V N+L+ +YAK G + DA
Sbjct: 311 GIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDA 370

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
            + F  M   DV++W ++I    QN     A  F+ +M   G +PD +T V L    + +
Sbjct: 371 RKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQS 430

Query: 552 GLAENAR----------WYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
              +N+R          W  E  D V G          ++D+  + G L  A  + + ++
Sbjct: 431 RDCKNSRSVHGFIMRRGWLME--DVVIG--------NAVVDMYAKLGLLDSAHKVFEIIL 480

Query: 602 GEPDATVWKALLSA 615
            + D   W  L++ 
Sbjct: 481 VK-DVISWNTLITG 493



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 136/275 (49%), Gaps = 14/275 (5%)

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
           F S+     AK +H+L+V  G     F++  L+++YA  G++  +   F+ +  KDV +W
Sbjct: 126 FDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTW 185

Query: 406 TSLITGCAYHGSYEEALK-YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
            S+I+   ++G + EA+  ++  + +S I PD      +L AC  L     G+++H    
Sbjct: 186 NSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHCWAF 242

Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ 524
           K G   ++ V  SL+ +Y++ G    A  +FD M  RD+ +W A+I G  QNG   +AL 
Sbjct: 243 KLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALD 302

Query: 525 FYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH----YACM 580
             D+M   G K +++T V +L  C   G    A      +  +Y IK G +        +
Sbjct: 303 VLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAM-----LIHLYVIKHGLEFDLFVSNAL 357

Query: 581 IDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
           I++  + G L +A+    QM    D   W ++++A
Sbjct: 358 INMYAKFGNLEDARKAFQQMF-ITDVVSWNSIIAA 391



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 130/276 (47%), Gaps = 32/276 (11%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           +  A+VD ++  G +D A ++FE +  +D  +WNT+I  YA +G   EA ++        
Sbjct: 455 IGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEV-------- 506

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                        Y +  E  E+          P+Q T  ++L   +  G LQ+G + HG
Sbjct: 507 -------------YKMMEECKEII---------PNQGTWVSILPAYAHVGALQQGMRIHG 544

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
             IKT   L+ FV T L+D+Y KC  + +A  LF   P  ++ V W  +I+ +  +G+  
Sbjct: 545 RVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQ-ESSVTWNAIISCHGIHGHAE 603

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           K ++ F +M  EGV+ +  TF S+L+AC+     + G      +   G + ++     ++
Sbjct: 604 KTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMV 663

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           D+  + G L+ A   ++   +  + S    ++G  R
Sbjct: 664 DLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACR 699


>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 278/745 (37%), Positives = 441/745 (59%), Gaps = 4/745 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSS-LIYGYSNYGLDIEAFELFWQM 124
           D   W++++  Y     L+ A+++  E P ++   W+  L    S Y L  EA +LF+ M
Sbjct: 23  DSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQ-EAVQLFYLM 81

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
           +    R +Q+   +++   +  G    GE  H    K  F+ +  +    V MY K + +
Sbjct: 82  RHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSV 141

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
                 FK     +N  +   +++G+       +       + VEG E N +TF SIL  
Sbjct: 142 ENGWQFFKAMMI-ENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKT 200

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           CA+    + G  +HG ++ SG   + ++ ++L+++YAKCG  + A ++       + VSW
Sbjct: 201 CASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSW 260

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
            ++I GF  +G+    L +F +M A     + +T+ S+L   +S  D++  K VH+ IVK
Sbjct: 261 TALITGFVAEGY-GSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVK 319

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
              +G  FV  AL+DMYAK   L+ A  +FN +  +D+ +WT ++ G A  G  E+A+K 
Sbjct: 320 NSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKC 379

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           F  M+  G+ P+   ++S LS C+ +  L+ G+Q+H++ +K+G    + V ++LV +YAK
Sbjct: 380 FIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAK 439

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CGC+ DA  VFD + +RD ++W  +I G +Q+G+G +AL+ ++ ML  GT PD +TF+G+
Sbjct: 440 CGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGV 499

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L ACSH GL E  + +F S+ K+YGI P  +HYACM+D+LGR+GK  E ++ +++M    
Sbjct: 500 LSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTS 559

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
           +  +W+ +L AC++HG++E GERAA  LFELEP     Y+ LSNM++  G W+D   VR 
Sbjct: 560 NVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRA 619

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
           LM +RG++KEPGCSWVE N QVH+F+S D  HP   +I+ K+ ++   +   GY P+ + 
Sbjct: 620 LMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDH 679

Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
            LHNV +  K+  L YHSE+LA+AF LL+      IRIFKNLR+CGDCH  MK IS +  
Sbjct: 680 VLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITN 739

Query: 785 RHIILRDSNRFHHFKAGNCSCGDYW 809
           + +++RD N FHHFK G+CSC ++W
Sbjct: 740 QELVVRDINCFHHFKNGSCSCQNFW 764



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 204/389 (52%), Gaps = 12/389 (3%)

Query: 47  SNSGEIDEA----GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWS 102
           ++ G+++E     GQ+ +   + D   WN+++  YA  G    A K+F E P ++  +W+
Sbjct: 202 ASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWT 261

Query: 103 SLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT 162
           +LI G+   G       +F QM  EG+ P+ YT  ++LR CS    +  G+Q H   +K 
Sbjct: 262 ALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKN 320

Query: 163 CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIEC 222
             D N FV T LVDMYAK + + +AE +F      ++  AWT ++ GY+Q+G G KA++C
Sbjct: 321 SLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIK-RDLFAWTVIVAGYAQDGQGEKAVKC 379

Query: 223 FRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK 282
           F  M+ EGV+ N+FT  S L+ C+ ++  D G Q+H   + +G   +++V SAL+DMYAK
Sbjct: 380 FIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAK 439

Query: 283 CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
           CG ++ A  + +     + VSWN++I G+++ G   +AL  F+ M       D+ T+  V
Sbjct: 440 CGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGV 499

Query: 343 LN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL-DCAFMVFNLMQDK 400
           L+ C    +     K  +SL    G          ++D+  + G   +    +  +    
Sbjct: 500 LSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTS 559

Query: 401 DVISWTSLITGCAYHGSYE----EALKYF 425
           +V+ W +++  C  HG+ E     A+K F
Sbjct: 560 NVLIWETVLGACKMHGNIEFGERAAMKLF 588



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 203/417 (48%), Gaps = 23/417 (5%)

Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEA 320
           ++ +G   + ++ S+L+++Y KC  L  AR++LE   I +   WN  +         +EA
Sbjct: 15  VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEA 74

Query: 321 LSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDM 380
           + LF  M    I+++ F + S+++  AS  D +  +S+H+ + K GFE    ++NA + M
Sbjct: 75  VQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTM 134

Query: 381 YAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVV 440
           Y K  +++  +  F  M  +++ S  +L++G     + ++  +    + + G  P+    
Sbjct: 135 YMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTF 194

Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT 500
            SIL  CA    L  G+ +H   +KSG      + NSLV VYAKCG  N A +VF  +  
Sbjct: 195 ISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE 254

Query: 501 RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH-----AGLAE 555
           RDV++WTALI G    G G   L+ ++QMLA G  P+  TF+ +L +CS       G   
Sbjct: 255 RDVVSWTALITGFVAEGYGS-GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQV 313

Query: 556 NARWYFESMDKVYGIKPGPDHYA-CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
           +A+    S+D       G D     ++D+  ++  L +A+ + ++++ + D   W  +++
Sbjct: 314 HAQIVKNSLD-------GNDFVGTALVDMYAKNRFLEDAETIFNRLI-KRDLFAWTVIVA 365

Query: 615 ACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
                G    GE+A     +++     P     N ++ A      +R+  L   R +
Sbjct: 366 GYAQDGQ---GEKAVKCFIQMQREGVKP-----NEFTLASSLSGCSRIATLDSGRQL 414



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 159/319 (49%), Gaps = 12/319 (3%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            Q+ +   D + F    ++  YA +  L +A+ +FN    ++ F W+ ++ GY+  G   
Sbjct: 315 AQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGE 374

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           +A + F QMQ EG +P+++TL + L  CS    L  G Q H  AIK     + FV + LV
Sbjct: 375 KAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALV 434

Query: 176 DMYAKCKCIFEAEYLFKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
           DMYAKC C+ +AE +F    DG   ++ V+W T+I GYSQ+G G KA++ F  M  EG  
Sbjct: 435 DMYAKCGCVEDAEVVF----DGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTV 490

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSS--GFEANVYVQSALIDMYAKCGDLDSAR 290
            ++ TF  +L+AC+ +   + G + H   LS   G    +   + ++D+  + G      
Sbjct: 491 PDEVTFIGVLSACSHMGLIEEGKK-HFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVE 549

Query: 291 RLLEYSEI-DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
             +E  ++  N + W +++      G  +       K+   + +ID   Y  + N FA+ 
Sbjct: 550 SFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDS-NYILLSNMFAAK 608

Query: 350 IDLNNAKSVHSLIVKTGFE 368
              ++  +V +L+   G +
Sbjct: 609 GMWDDVTNVRALMSTRGVK 627


>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 274/675 (40%), Positives = 413/675 (61%), Gaps = 33/675 (4%)

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
           N +    L+  Y+K  C+ E E +F   P  ++ V+W ++I+ Y+  G+  ++++ +  M
Sbjct: 74  NLYSWNTLLSSYSKLACLPEMERVFHAMPT-RDMVSWNSLISAYAGRGFLLQSVKAYNLM 132

Query: 227 RVEG-VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK--- 282
              G    N+    ++L   +       G QVHG ++  GF++ V+V S L+DMY+K   
Sbjct: 133 LYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGL 192

Query: 283 ----------------------------CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
                                       C  ++ +R+L    +  + +SW +MI GF + 
Sbjct: 193 VFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQN 252

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
           G  +EA+ LF++M   ++++D +T+ SVL      + L   K VH+ I++T ++   FV 
Sbjct: 253 GLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVG 312

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           +AL+DMY K  ++  A  VF  M  K+V+SWT+++ G   +G  EEA+K F DM+ +GI 
Sbjct: 313 SALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIE 372

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           PD   + S++S+CA L  LE G Q H   L SG  S ++V N+LV +Y KCG I D++R+
Sbjct: 373 PDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRL 432

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
           F  M   D ++WTAL+ G AQ GK  E L+ ++ MLA G KPD +TF+G+L ACS AGL 
Sbjct: 433 FSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLV 492

Query: 555 ENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
           +     FESM K + I P  DHY CMIDL  R+G+L EA+  +++M   PDA  W +LLS
Sbjct: 493 QKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLS 552

Query: 615 ACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
           +CR H ++E+G+ AA +L +LEP N   Y+ LS++Y+  GKWE+ A +RK M+ +G+RKE
Sbjct: 553 SCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKE 612

Query: 675 PGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGK 734
           PGCSW++  +QVHIF ++D+ +P    IYS+++++   + + GYVPDMN  LH+V++  K
Sbjct: 613 PGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEGYVPDMNSVLHDVDDSEK 672

Query: 735 EIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNR 794
              L +HSEKLA+AFGL+ +P G PIR+ KNLRVCGDCH A KYIS +  R I++RD+ R
Sbjct: 673 IKMLNHHSEKLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATKYISKITQREILVRDAAR 732

Query: 795 FHHFKAGNCSCGDYW 809
           FH FK G CSCGD+W
Sbjct: 733 FHLFKDGRCSCGDFW 747



 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 153/508 (30%), Positives = 267/508 (52%), Gaps = 33/508 (6%)

Query: 39  LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF 98
           LN  +  ++    I  A ++F++M  R+ ++WNT++++Y+    L E +++F+  P ++ 
Sbjct: 47  LNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDM 106

Query: 99  FTWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
            +W+SLI  Y+  G  +++ + +  M   G +  ++  L  +L L S +G +  G Q HG
Sbjct: 107 VSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHG 166

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG-------------------- 197
           + +K  F    FV + LVDMY+K   +F A   F   P+                     
Sbjct: 167 HVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIED 226

Query: 198 ----------KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
                     K+ ++WT MI G++QNG   +AI+ FR+MR+E +E +Q+TF S+LTAC  
Sbjct: 227 SRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGG 286

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           V A   G QVH  I+ + ++ N++V SAL+DMY KC  + SA  +       N VSW +M
Sbjct: 287 VMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAM 346

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           +VG+ + G+ +EA+ +F  M    I+ DDFT  SV++  A+   L      H   + +G 
Sbjct: 347 LVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGL 406

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
             +  V+NAL+ +Y K G+++ +  +F+ M   D +SWT+L++G A  G   E L+ F  
Sbjct: 407 ISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFES 466

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LVLVYAKCG 486
           M   G  PD V    +LSAC+   +++ G Q+    +K      +    + ++ ++++ G
Sbjct: 467 MLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAG 526

Query: 487 CINDANRVFDSM-HTRDVITWTALIMGC 513
            + +A +  + M  + D I W +L+  C
Sbjct: 527 RLEEARKFINKMPFSPDAIGWASLLSSC 554



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 198/428 (46%), Gaps = 75/428 (17%)

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           ++H  I+ +     +++ + L+  YAK   +  ARR+ +     N  SWN+++  +++  
Sbjct: 30  KIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKLA 89

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS-----------NIDLNNAK-------- 356
              E   +F  M  RD+     ++ S+++ +A            N+ L N          
Sbjct: 90  CLPEMERVFHAMPTRDM----VSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIAL 145

Query: 357 -----------------SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL--- 396
                             VH  +VK GF+ Y FV + L+DMY+K G + CA   F+    
Sbjct: 146 STMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPE 205

Query: 397 ----------------------------MQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
                                       MQ+KD ISWT++I G   +G   EA+  F +M
Sbjct: 206 KNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREM 265

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
           R+  +  D     S+L+AC  +  L+ G+QVHA  +++    ++ V ++LV +Y KC  I
Sbjct: 266 RLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSI 325

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
             A  VF  M+ ++V++WTA+++G  QNG  +EA++ +  M   G +PD  T   ++ +C
Sbjct: 326 KSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSC 385

Query: 549 SH-AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
           ++ A L E A+++  ++  V G+         ++ L G+ G + ++  L  +M    D  
Sbjct: 386 ANLASLEEGAQFHCRAL--VSGLISFITVSNALVTLYGKCGSIEDSHRLFSEM-SYVDEV 442

Query: 608 VWKALLSA 615
            W AL+S 
Sbjct: 443 SWTALVSG 450


>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 304/813 (37%), Positives = 467/813 (57%), Gaps = 46/813 (5%)

Query: 42   ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE-------- 92
            ALV+ ++  G I EA  LF+ M+ RD   WN M+ AY ++    EA  LF+E        
Sbjct: 800  ALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRP 859

Query: 93   ------------------TPFKNFFTWSSLIYGYSNYGLDI----EAFELFWQ------- 123
                                 K F  +++ ++ Y + G D+    +A   F Q       
Sbjct: 860  DDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEA 919

Query: 124  ----MQLEGYRPSQYTLDNVLRLCSLKGL--LQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
                + +   R +   L  V+ L  + GL  L+ G+Q HG  +++  D    V   L++M
Sbjct: 920  VDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINM 979

Query: 178  YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
            Y K   +  A  +F    +  + ++W TMI+G + +G    ++  F  +  + +  +QFT
Sbjct: 980  YVKAGSVSRARSVFGQMNE-VDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFT 1038

Query: 238  FPSILTACAAVSARDFGA-QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
              S+L AC+++    + A Q+H C + +G   + +V +ALID+Y+K G ++ A  L    
Sbjct: 1039 VASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQ 1098

Query: 297  EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
            +  +  SWN+++ G+   G   +AL L+  M     + D  T  +        + L   K
Sbjct: 1099 DGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGK 1158

Query: 357  SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
             +H+++VK GF    FV + ++DMY K G ++ A  VF+ +   D ++WT++I+GC  +G
Sbjct: 1159 QIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENG 1218

Query: 417  SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
              E AL  +  MR+S + PD    ++++ AC+ LT LE G+Q+HA  +K        V  
Sbjct: 1219 QEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMT 1278

Query: 477  SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
            SLV +YAKCG I DA  +F   +TR + +W A+I+G AQ+G  KEALQF+  M +RG  P
Sbjct: 1279 SLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMP 1338

Query: 537  DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
            D +TF+G+L ACSH+GL   A   F SM K YGI+P  +HY+C++D L R+G++ EA+ +
Sbjct: 1339 DRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKV 1398

Query: 597  LDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
            +  M  E  A++++ LL+ACRV  D E G+R A  L  LEP ++  YV LSN+Y+ A +W
Sbjct: 1399 ISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQW 1458

Query: 657  EDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA 716
            E+ A  R +M+   ++K+PG SWV+  ++VH+F++ DR H     IY+K++ IM  I+E 
Sbjct: 1459 ENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREE 1518

Query: 717  GYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAM 776
            GYVPD +FAL +VEEE KE  L YHSEKLA+A+GL+  P    +R+ KNLRVCGDCH+A+
Sbjct: 1519 GYVPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHSAI 1578

Query: 777  KYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            KYIS V+ R I+LRD+NRFHHF+ G CSCGDYW
Sbjct: 1579 KYISKVFKREIVLRDANRFHHFRNGICSCGDYW 1611



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 170/648 (26%), Positives = 277/648 (42%), Gaps = 74/648 (11%)

Query: 66   DGFTWNTMIAAYANSGRLREAKKLFNETPFKN--FFTWSSLIYGYSNYG-LDIEAFELFW 122
            D F  N +I  YA  G L  A+KLF+ TP  N    TW++++   + +     + F LF 
Sbjct: 690  DRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFR 749

Query: 123  QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
             ++      +++TL  V ++C L       E  HGYA+K     + FV   LV++YAK  
Sbjct: 750  LLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFG 809

Query: 183  CIFEAEYLFKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFP 239
             I EA  LF    DG   ++ V W  M+  Y      ++A+  F +    G   +  T  
Sbjct: 810  LIREARVLF----DGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLR 865

Query: 240  SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
            ++             ++V  C      + N+ ++      YA         +L  Y +  
Sbjct: 866  TL-------------SRVVKC------KKNI-LELKQFKAYAT--------KLFMYDDDG 897

Query: 300  NEV-SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
            ++V  WN  +  F ++G   EA+  F  M    +  D  T+  +L   A    L   K +
Sbjct: 898  SDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQI 957

Query: 359  HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
            H +++++G +    V N LI+MY K G++  A  VF  M + D+ISW ++I+GC   G  
Sbjct: 958  HGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLE 1017

Query: 419  EEALKYFSDMRISGICPDHVVVSSILSACAELT-VLEFGQQVHAVFLKSGGCSSLSVDNS 477
            E ++  F  +    + PD   V+S+L AC+ L        Q+HA  +K+G      V  +
Sbjct: 1018 ECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTA 1077

Query: 478  LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
            L+ VY+K G + +A  +F +    D+ +W A++ G   +G   +AL+ Y  M   G + D
Sbjct: 1078 LIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSD 1137

Query: 538  YITFVGLLFACSH-AGLAENARWY---------------------------FESMDKVYG 569
             IT V    A     GL +  + +                            ES  +V+ 
Sbjct: 1138 QITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFS 1197

Query: 570  IKPGPDHYA--CMIDLLGRSGKLIEAKALLDQM---VGEPDATVWKALLSACRVHGDLEL 624
              P PD  A   MI     +G+   A     QM     +PD   +  L+ AC +   LE 
Sbjct: 1198 EIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQ 1257

Query: 625  GERAANNLFELE-PMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
            G +   N+ +L    +      L +MY+  G  EDA  + K   +R I
Sbjct: 1258 GRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRI 1305



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/494 (25%), Positives = 213/494 (43%), Gaps = 44/494 (8%)

Query: 138  NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD- 196
            ++LR       L  G++ H   + +    + FV   L+ MYAKC  +  A  LF   PD 
Sbjct: 661  SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720

Query: 197  GKNHVAWTTMITGYSQNG-YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGA 255
             ++ V W  +++  + +          FR +R   V + + T   +   C   ++     
Sbjct: 721  NRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASE 780

Query: 256  QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
             +HG  +  G + +V+V  AL+++YAK G +  AR L +   + + V WN M+  +    
Sbjct: 781  SLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTC 840

Query: 316  FHKEALSLFKKMHARDIKIDDFTYPS---VLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
               EA+ LF + H    + DD T  +   V+ C  + ++L   K+  + +          
Sbjct: 841  LEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLF--------- 891

Query: 373  VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
                   MY   G+              DVI W   ++     G   EA+  F DM  S 
Sbjct: 892  -------MYDDDGS--------------DVIVWNKALSRFLQRGEAWEAVDCFVDMINSR 930

Query: 433  ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
            +  D +    +L+  A L  LE G+Q+H + ++SG    +SV N L+ +Y K G ++ A 
Sbjct: 931  VACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRAR 990

Query: 493  RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
             VF  M+  D+I+W  +I GC  +G  + ++  +  +L     PD  T   +L ACS   
Sbjct: 991  SVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACS--- 1047

Query: 553  LAENARWYFESMDKVYGIKPGP--DHY--ACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
             +    +Y  +      +K G   D +    +ID+  + GK+ EA+ L     G  D   
Sbjct: 1048 -SLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGF-DLAS 1105

Query: 609  WKALLSACRVHGDL 622
            W A++    V GD 
Sbjct: 1106 WNAIMHGYIVSGDF 1119


>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 886

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 292/758 (38%), Positives = 451/758 (59%), Gaps = 23/758 (3%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           NT++  Y   G      K+F+    +N  +W+SLI    ++     A E F  M  E   
Sbjct: 133 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVE 192

Query: 131 PSQYTLDNVLRLCS----LKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
           PS +TL +V   CS     +GLL  G+Q H Y ++   +LN+F++  LV MY K   +  
Sbjct: 193 PSSFTLVSVALACSNFPMPEGLLM-GKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLAS 250

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           ++ L   F +G++ V W T+++   QN    +A+E  R+M +EGVE + FT  S+L AC+
Sbjct: 251 SKVLLGSF-EGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACS 309

Query: 247 AVSARDFGAQVHGCILSSG-FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-W 304
            +     G ++H   L +G  + N +V SAL+DMY  C  + S  R+ +    D ++  W
Sbjct: 310 HLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFD-GMFDRKIGLW 368

Query: 305 NSMIVGFARQGFHKEALSLFKKMH-ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           N+MI G+A+  + +EAL LF +M  +  +  +  T   V+     +   +  +++H  +V
Sbjct: 369 NAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVV 428

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K G +  +FV NAL+DMY++ G +D A  +F  M+D+D+++W ++ITG  +   +E+AL 
Sbjct: 429 KRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALL 488

Query: 424 YFSDMRI-----------SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
               M+I             + P+ + + +IL +CA L+ L  G+++HA  +K+   + +
Sbjct: 489 MLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDV 548

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
           +V ++LV +YAKCGC+  + +VFD +  R+VITW  ++M    +G  ++A+     M+ +
Sbjct: 549 AVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQ 608

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIE 592
           G KP+ +TF+ +  ACSH+G+       F +M K YG++P  DHYAC++DLLGR+G++ E
Sbjct: 609 GVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKE 668

Query: 593 AKALLDQMVGEPD-ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYS 651
           A  L++ +    D A  W +LL ACR+H +LE+GE AA NL +LEP  A  YV L+N+YS
Sbjct: 669 AYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYS 728

Query: 652 TAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIML 711
           +AG W  A  VR+ MK++G+RKEPGCSW+E   +VH F++ D  HP    +   ++ +  
Sbjct: 729 SAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWE 788

Query: 712 LIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGD 771
            +++ GY+PD +  LHNVEE+ KEI L  HSEKLA+AFG+L    G  IR+ KNLRVC D
Sbjct: 789 RMRKEGYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCND 848

Query: 772 CHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           CH A K+IS V  R IILRD  RFHHFK G CSCGDYW
Sbjct: 849 CHLATKFISKVVDREIILRDVRRFHHFKNGTCSCGDYW 886



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 231/464 (49%), Gaps = 17/464 (3%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           + F  NT++A Y   G+L  +K L      ++  TW++++         +EA E   +M 
Sbjct: 231 NSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMV 290

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT-CFDLNAFVVTGLVDMYAKCKCI 184
           LEG  P  +T+ +VL  CS   +L+ G++ H YA+K    D N+FV + LVDMY  CK +
Sbjct: 291 LEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 350

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE-GVESNQFTFPSILT 243
                +F    D K  + W  MITGY+QN Y  +A+  F +M    G+ +N  T   ++ 
Sbjct: 351 LSGCRVFDGMFDRKIGL-WNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVP 409

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC    A      +HG ++  G + + +VQ+AL+DMY++ G +D A+R+    E  + V+
Sbjct: 410 ACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVT 469

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARD-----------IKIDDFTYPSVLNCFASNIDL 352
           WN++I G+     H++AL +  KM   +           +K +  T  ++L   A+   L
Sbjct: 470 WNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSAL 529

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
              K +H+  +K        V +AL+DMYAK G L  +  VF+ +  ++VI+W  ++   
Sbjct: 530 AKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAY 589

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
             HG+ ++A+     M + G+ P+ V   S+ +AC+   ++  G ++     K  G    
Sbjct: 590 GMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPS 649

Query: 473 SVDNSLVL-VYAKCGCINDANRVFDSMHTR--DVITWTALIMGC 513
           S   + V+ +  + G + +A ++ + +         W++L+  C
Sbjct: 650 SDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGAC 693



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 214/425 (50%), Gaps = 21/425 (4%)

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
           W  ++    ++    +A+  + DM V G++ + F FP++L A A +   D G Q+H  + 
Sbjct: 61  WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120

Query: 263 SSGFEAN-VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEAL 321
             G+  + V V + L+++Y KCGD  +  ++ +     N+VSWNS+I         + AL
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180

Query: 322 SLFKKMHARDIKIDDFTYPSV-LNC--FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
             F+ M   D++   FT  SV L C  F     L   K VH+  ++ G E   F+ N L+
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSFIINTLV 239

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
            MY K G L  + ++    + +D+++W ++++    +  + EAL+Y  +M + G+ PD  
Sbjct: 240 AMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGF 299

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS-VDNSLVLVYAKCGCINDANRVFDS 497
            +SS+L AC+ L +L  G+++HA  LK+G     S V ++LV +Y  C  +    RVFD 
Sbjct: 300 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDG 359

Query: 498 MHTRDVITWTALIMGCAQNGKGKEALQFYDQM-LARGTKPDYITFVGLLFACSHAGLAEN 556
           M  R +  W A+I G AQN   +EAL  + +M  + G   +  T  G++ AC  +G    
Sbjct: 360 MFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSG---- 415

Query: 557 ARWYFESMDKVYG--IKPGPDH----YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
               F   + ++G  +K G D        ++D+  R GK+  AK +  +M  + D   W 
Sbjct: 416 ---AFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKM-EDRDLVTWN 471

Query: 611 ALLSA 615
            +++ 
Sbjct: 472 TIITG 476



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 138/287 (48%), Gaps = 29/287 (10%)

Query: 30  GNSVKPASDLNR----ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLR 84
           G  VK   D +R    AL+D +S  G+ID A ++F KM DRD  TWNT+I  Y  S R  
Sbjct: 425 GFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHE 484

Query: 85  EAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCS 144
           +A  + ++                    L+ +A E   ++ L   +P+  TL  +L  C+
Sbjct: 485 DALLMLHKMQI-----------------LERKASERASRVSL---KPNSITLMTILPSCA 524

Query: 145 LKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWT 204
               L +G++ H YAIK     +  V + LVDMYAKC C+  +  +F   P  +N + W 
Sbjct: 525 ALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPI-RNVITWN 583

Query: 205 TMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV-HGCILS 263
            ++  Y  +G    AI+  R M V+GV+ N+ TF S+  AC+     + G ++ +     
Sbjct: 584 VIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKD 643

Query: 264 SGFEANVYVQSALIDMYAKCGDLDSARRLLEY--SEIDNEVSWNSMI 308
            G E +    + ++D+  + G +  A +L+       D   +W+S++
Sbjct: 644 YGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLL 690


>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  557 bits (1436), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 299/745 (40%), Positives = 435/745 (58%), Gaps = 8/745 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL- 126
           F    ++  YAN G +  ++  F++ P K+ + W+S+I  Y + G   EA   F+Q+ L 
Sbjct: 152 FISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLV 211

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
              RP  YT   VL+ C   G L  G + H +A K  F  N FV   L+ MY++      
Sbjct: 212 SEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGI 268

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A  LF   P  ++  +W  MI+G  QNG   +A++   +MR+EG++ N  T  SIL  C 
Sbjct: 269 ARSLFDDMP-FRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCP 327

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            +        +H  ++  G E +++V +ALI+MYAK G+L+ AR+  +   I + VSWNS
Sbjct: 328 QLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNS 387

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           +I  + +      A   F KM     + D  T  S+ +  A + D  N++SVH  I++ G
Sbjct: 388 IIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRG 447

Query: 367 FEGYKFV-NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           +     V  NA++DMYAK G LD A  VF ++  KDVISW +LITG A +G   EA++ +
Sbjct: 448 WLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVY 507

Query: 426 SDMR-ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
             M     I P+     SIL A A +  L+ G ++H   +K+     + V   L+ VY K
Sbjct: 508 KMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGK 567

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG + DA  +F  +     +TW A+I     +G  ++ L+ + +ML  G KPD++TFV L
Sbjct: 568 CGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSL 627

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L ACSH+G  E  +W F  M + YGIKP   HY CM+DLLGR+G L  A   +  M  +P
Sbjct: 628 LSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQP 686

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
           DA++W ALL ACR+HG++ELG+ A++ LFE++  N   YV LSN+Y+  GKWE   +VR 
Sbjct: 687 DASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRS 746

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
           L + RG++K PG S +E N +V +F + ++ HP   +IY ++  +   +K  GY+PD +F
Sbjct: 747 LARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSF 806

Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
            L +VEE+ KE  L  HSE+LA+AFG+++ P  +PIRIFKNLRVCGDCH A K+IS +  
Sbjct: 807 VLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQ 866

Query: 785 RHIILRDSNRFHHFKAGNCSCGDYW 809
           R I++RDSNRFHHFK G CSCGDYW
Sbjct: 867 REIVVRDSNRFHHFKDGICSCGDYW 891



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 185/365 (50%), Gaps = 5/365 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N +I  YA  G L +A+K F +    +  +W+S+I  Y      + A   F +MQ
Sbjct: 350 DLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQ 409

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV-TGLVDMYAKCKCI 184
           L G++P   TL ++  + +     +     HG+ ++  + +   V+   +VDMYAK   +
Sbjct: 410 LNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLL 469

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILT 243
             A  +F++ P  K+ ++W T+ITGY+QNG   +AIE ++ M   + +  NQ T+ SIL 
Sbjct: 470 DSAHKVFEIIPV-KDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILP 528

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           A A V A   G ++HG ++ +    +V+V + LID+Y KCG L  A  L      ++ V+
Sbjct: 529 AYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVT 588

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN++I      G  ++ L LF +M    +K D  T+ S+L+  + +  +   K    L+ 
Sbjct: 589 WNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQ 648

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           + G +        ++D+  + G L+ A+  + ++    D   W +L+  C  HG+ E   
Sbjct: 649 EYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELG- 707

Query: 423 KYFSD 427
           K+ SD
Sbjct: 708 KFASD 712



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 179/374 (47%), Gaps = 25/374 (6%)

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
           F   +H  ++ +G   ++++ + L+++YA  GD+  +R   +     +  +WNSMI  + 
Sbjct: 134 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYV 193

Query: 313 RQGFHKEALSLFKK-MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
             G   EA+  F + +   +I+ D +T+P VL    + +D    + +H    K GF+   
Sbjct: 194 HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNV 250

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
           FV  +LI MY++ G    A  +F+ M  +D+ SW ++I+G   +G+  +AL    +MR+ 
Sbjct: 251 FVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 310

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
           GI  + V V SIL  C +L  +     +H   +K G    L V N+L+ +YAK G + DA
Sbjct: 311 GIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDA 370

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
            + F  M   DV++W ++I    QN     A  F+ +M   G +PD +T V L    + +
Sbjct: 371 RKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQS 430

Query: 552 GLAENAR----------WYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
              +N+R          W  E  D V G          ++D+  + G L  A  +  +++
Sbjct: 431 RDCKNSRSVHGFIMRRGWLME--DVVIG--------NAVVDMYAKLGLLDSAHKVF-EII 479

Query: 602 GEPDATVWKALLSA 615
              D   W  L++ 
Sbjct: 480 PVKDVISWNTLITG 493



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 138/281 (49%), Gaps = 14/281 (4%)

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
           F S+     AK +H+L+V  G     F++  L+++YA  G++  +   F+ +  KDV +W
Sbjct: 126 FDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAW 185

Query: 406 TSLITGCAYHGSYEEALK-YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
            S+I+   ++G + EA+  ++  + +S I PD      +L AC  L     G+++H    
Sbjct: 186 NSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAF 242

Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ 524
           K G   ++ V  SL+ +Y++ G    A  +FD M  RD+ +W A+I G  QNG   +AL 
Sbjct: 243 KLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALD 302

Query: 525 FYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH----YACM 580
             D+M   G K +++T V +L  C   G    A      +  +Y IK G +        +
Sbjct: 303 VLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAM-----LIHLYVIKHGLEFDLFVSNAL 357

Query: 581 IDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGD 621
           I++  + G L +A+    QM    D   W ++++A   + D
Sbjct: 358 INMYAKFGNLEDARKAFQQMF-ITDVVSWNSIIAAYEQNDD 397



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 130/276 (47%), Gaps = 32/276 (11%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           +  A+VD ++  G +D A ++FE +  +D  +WNT+I  YA +G   EA ++        
Sbjct: 455 IGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEV-------- 506

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                        Y +  E  E+          P+Q T  ++L   +  G LQ+G + HG
Sbjct: 507 -------------YKMMEECKEII---------PNQGTWVSILPAYAHVGALQQGMKIHG 544

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
             IKT   L+ FV T L+D+Y KC  + +A  LF   P  ++ V W  +I+ +  +G+  
Sbjct: 545 RVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQ-ESSVTWNAIISCHGIHGHAE 603

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           K ++ F +M  EGV+ +  TF S+L+AC+     + G      +   G + ++     ++
Sbjct: 604 KTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMV 663

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           D+  + G L+ A   ++   +  + S    ++G  R
Sbjct: 664 DLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACR 699


>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  557 bits (1435), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 291/754 (38%), Positives = 433/754 (57%), Gaps = 2/754 (0%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
              +  S+ D    + +   Y +  ++  A++LF+E P  +   W+ +I  Y+  G    
Sbjct: 33  HFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDG 92

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
           A +L+  M   G RP++YT   VL+ CS    ++ G + H +A     + + FV T LVD
Sbjct: 93  AIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVD 152

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
            YAKC  + EA+ LF      ++ VAW  MI G S  G    A++    M+ EG+  N  
Sbjct: 153 FYAKCGILVEAQRLFSSMSH-RDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSS 211

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           T   +L       A   G  +HG  +   F+  V V + L+DMYAKC  L  AR++ +  
Sbjct: 212 TIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVM 271

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNIDLNNA 355
            + NEVSW++MI G+      KEAL LF +M  +D +     T  SVL   A   DL+  
Sbjct: 272 GVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRG 331

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           + +H  I+K G      + N L+ MYAK G +D A   F+ M  KD +S++++++GC  +
Sbjct: 332 RKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQN 391

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G+   AL  F  M++SGI PD   +  +L AC+ L  L+ G   H   +  G  +   + 
Sbjct: 392 GNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLIC 451

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           N+L+ +Y+KCG I+ A  VF+ M   D+++W A+I+G   +G G EAL  +  +LA G K
Sbjct: 452 NALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLK 511

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           PD ITF+ LL +CSH+GL    R +F++M + + I P  +H  CM+D+LGR+G + EA  
Sbjct: 512 PDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHH 571

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
            +  M  EPD  +W ALLSACR+H ++ELGE  +  +  L P +   +V LSN+YS AG+
Sbjct: 572 FIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGR 631

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
           W+DAA +R   K  G++K PGCSW+E N  VH F+  D+ H   + I  K++E+++ +K 
Sbjct: 632 WDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKR 691

Query: 716 AGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
            GY  + +F   +VEEE KE  L YHSEKLA+AFG+L L  G PI + KNLRVCGDCH A
Sbjct: 692 LGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHAA 751

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +K+++ +  R I +RD+NRFHHFK G C+CGD+W
Sbjct: 752 IKFMTVITKREITVRDANRFHHFKNGTCNCGDFW 785



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 183/385 (47%), Gaps = 9/385 (2%)

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           +L AC    +     ++H   L +   A+  V   L  +Y  C  +  ARRL +     +
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
            + WN +I  +A  G    A+ L+  M    ++ + +TYP VL   +  + + +   +HS
Sbjct: 74  VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
                G E   FV  AL+D YAK G L  A  +F+ M  +DV++W ++I GC+ +G  ++
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
           A++    M+  GICP+   +  +L    E   L  G+ +H   ++    + + V   L+ 
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLD 253

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR-GTKPDYI 539
           +YAKC C+  A ++FD M  R+ ++W+A+I G   +   KEAL+ +DQM+ +    P  +
Sbjct: 254 MYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPV 313

Query: 540 TFVGLLFACSHAGLAENAR---WYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           T   +L AC+        R    Y   +  V  I  G      ++ +  + G + +A   
Sbjct: 314 TLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNT----LLSMYAKCGVIDDAIRF 369

Query: 597 LDQMVGEPDATVWKALLSACRVHGD 621
            D M    D+  + A++S C  +G+
Sbjct: 370 FDXM-NPKDSVSFSAIVSGCVQNGN 393



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 146/332 (43%), Gaps = 13/332 (3%)

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
           Y  +L     +  L  AK +H   +K        V + L  +Y     +  A  +F+ + 
Sbjct: 11  YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIP 70

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
           +  VI W  +I   A++G ++ A+  +  M   G+ P+      +L AC+ L  +E G +
Sbjct: 71  NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE 130

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK 518
           +H+     G  S + V  +LV  YAKCG + +A R+F SM  RDV+ W A+I GC+  G 
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACSHA-----GLAENARWYFESMDKVYGIKPG 573
             +A+Q   QM   G  P+  T VG+L     A     G A +      S D    +  G
Sbjct: 191 CDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTG 250

Query: 574 PDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLF 633
                 ++D+  +   L+ A+ + D M G  +   W A++        ++      + + 
Sbjct: 251 ------LLDMYAKCQCLLYARKIFDVM-GVRNEVSWSAMIGGYVXSDCMKEALELFDQMI 303

Query: 634 ELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
             + M+  P V L ++     K  D +R RKL
Sbjct: 304 LKDAMDPTP-VTLGSVLRACAKLTDLSRGRKL 334



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 3/156 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G L  +    D    N +I  Y+  G++  A+++FN     +  +W+++I GY  +GL +
Sbjct: 437 GYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGM 496

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV--VTG 173
           EA  LF  +   G +P   T   +L  CS  GL+  G  +   A+   F +   +     
Sbjct: 497 EALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFD-AMSRDFSIVPRMEHCIC 555

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
           +VD+  +   I EA +  +  P   +   W+ +++ 
Sbjct: 556 MVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSA 591


>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
 gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
          Length = 815

 Score =  557 bits (1435), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 286/782 (36%), Positives = 459/782 (58%), Gaps = 17/782 (2%)

Query: 36  ASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF 95
            S  N  + D S  G++ +A QL ++M +R+ F+ + +I+ Y  SG L  A+++F++T  
Sbjct: 43  TSRFNFMIKDLSERGQLCQARQLLDQMPNRNSFSIDIIISGYVKSGNLTVARRIFDDTDE 102

Query: 96  KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
           +    W+++I  YS      +AF+LF +M   G +P   T   +L  C+   + +   Q 
Sbjct: 103 RTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCNDLEVAKELYQA 162

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGY 215
           H   +K    LN  V   L+D Y K   +  A  LF +   G + V++  MITGY+ NG 
Sbjct: 163 HAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLF-LEMCGWDSVSFNVMITGYANNGL 221

Query: 216 GFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSA 275
             +AIE F +M+  G + + FTF ++++A   +    FG Q+HG ++ + F  NV+V +A
Sbjct: 222 NEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNA 281

Query: 276 LIDMYAKCGDLDSARRLL-EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKI 334
            +D Y+K   ++  R+L  E  E+D  VS+N +I  +A  G  KE++ LF+++       
Sbjct: 282 FLDFYSKHDCVNEVRKLFNEMPELDG-VSYNVIITAYAWVGKVKESIDLFQELQFTTFDR 340

Query: 335 DDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVF 394
            +F +P++L+  AS++DL   + +H+ +V +  +    V+N+L+DMYAK G  + A  +F
Sbjct: 341 KNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIF 400

Query: 395 NLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLE 454
             +  +  + WT++I+     G +E  LK F +MR + +  D    + +L A A L  + 
Sbjct: 401 LRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLASIL 460

Query: 455 FGQQVHAVFLKSG------GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
            G+Q+H+  ++SG      GC+       L+ +YA C  I DA + F+ M  R+V+TW A
Sbjct: 461 LGKQLHSCVIRSGFMNVYSGCA-------LLDMYANCASIKDAIKTFEEMSERNVVTWNA 513

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
           L+   AQNG GK  L+ +++M+  G +PD ++F+ +L ACSH  L E    YF  M  VY
Sbjct: 514 LLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVY 573

Query: 569 GIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
            + P  +HY  M+D L RSG+  EA+ L+ QM  EPD  VW ++L++CR+H +  L  +A
Sbjct: 574 NLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLNSCRIHKNYALARKA 633

Query: 629 ANNLFELEPM-NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVH 687
           A  LF ++ + +A PYV +SN+++ AG+W+   +V+K M+ RG+RK P  SWVE   +VH
Sbjct: 634 AGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRGVRKLPAYSWVEIKHKVH 693

Query: 688 IFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAV 747
           +F + D  HP + +I  KI+ +   +++ GY PD++ A  NV++E K   L YHSE+LA+
Sbjct: 694 VFSANDDKHPQQLEILRKIEMLAEQMEKEGYDPDISCAHQNVDKESKIDSLKYHSERLAI 753

Query: 748 AFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGD 807
           AF L+  P+G+PI + KNLR C DCH A+K IS +  R I +RDSNRFHHF+ G+CSCGD
Sbjct: 754 AFALINTPEGSPILVMKNLRACTDCHAAIKVISKIVGREITVRDSNRFHHFRDGSCSCGD 813

Query: 808 YW 809
           YW
Sbjct: 814 YW 815



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 94/400 (23%), Positives = 162/400 (40%), Gaps = 81/400 (20%)

Query: 358 VHSLIVKTGFEGY-------------------------------KFVNNALIDMYAKQGN 386
           + + IVKTGF+                                  F  + +I  Y K GN
Sbjct: 30  IDARIVKTGFDPITSRFNFMIKDLSERGQLCQARQLLDQMPNRNSFSIDIIISGYVKSGN 89

Query: 387 LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSA 446
           L  A  +F+   ++ V++WT++I   +    + +A K F++M  SG  PD+V   ++L+ 
Sbjct: 90  LTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTG 149

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITW 506
           C +L V +   Q HA  +K G   +  V N+L+  Y K G ++ A R+F  M   D +++
Sbjct: 150 CNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSF 209

Query: 507 TALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENA--------- 557
             +I G A NG  +EA++ + +M   G KP   TF  ++ A    GL + A         
Sbjct: 210 NVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISAS--VGLDDTAFGQQIHGFV 267

Query: 558 ----------------------------RWYFESMDKVYGIKPGPDHYACMIDLLGRSGK 589
                                       R  F  M ++ G+      Y  +I      GK
Sbjct: 268 VKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVS-----YNVIITAYAWVGK 322

Query: 590 LIEAKALLDQM---VGEPDATVWKALLSACRVHGDLELGERA-ANNLFELEPMNAMPYVQ 645
           + E+  L  ++     +     +  +LS      DL++G +  A  +  +   +      
Sbjct: 323 VKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNS 382

Query: 646 LSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQ 685
           L +MY+  GK+E+A R+   + SR     P  + +  N Q
Sbjct: 383 LVDMYAKCGKFEEADRIFLRLSSRST--VPWTAMISANVQ 420


>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  557 bits (1435), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 281/763 (36%), Positives = 447/763 (58%), Gaps = 10/763 (1%)

Query: 56  GQLFEKMSDR-----DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSN 110
           GQ+   M+ +     D F  N +IA Y   G + EA K+F   P +N  +W+S+I G+S 
Sbjct: 120 GQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSE 179

Query: 111 YGLDIEAFELFWQMQL--EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA 168
            G   E+F  F +M +  E + P   TL  VL +C+ +  +++G   HG A+K   +   
Sbjct: 180 NGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEEL 239

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
            V   L+DMY+KC+ + EA+ LF    D KN V+W +MI GY++     +     + M+ 
Sbjct: 240 MVNNSLIDMYSKCRFLSEAQLLFDK-NDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQT 298

Query: 229 EG--VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDL 286
           E   +++++FT  ++L  C   S      ++HG     G ++N  V +A I  Y +CG L
Sbjct: 299 EDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGAL 358

Query: 287 DSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCF 346
            S+ R+ +  +     SWN+++ G+A+    ++AL L+ +M    +  D FT  S+L   
Sbjct: 359 CSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLAC 418

Query: 347 ASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWT 406
           +    L+  + +H   ++ G     F+  +L+ +Y   G    A ++F+ M+ + ++SW 
Sbjct: 419 SRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWN 478

Query: 407 SLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
            +I G + +G  +EA+  F  M   GI P  + +  +  AC++L+ L  G+++H   LK+
Sbjct: 479 VMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKA 538

Query: 467 GGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFY 526
                + V +S++ +YAK GCI  + R+FD +  +DV +W  +I G   +G+GKEAL+ +
Sbjct: 539 HLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELF 598

Query: 527 DQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGR 586
           ++ML  G KPD  TF G+L ACSHAGL E+   YF  M  ++ I+P  +HY C++D+LGR
Sbjct: 599 EKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGR 658

Query: 587 SGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQL 646
           +G++ +A  L+++M G+PD+ +W +LLS+CR+HG+L LGE+ AN L ELEP     YV +
Sbjct: 659 AGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLI 718

Query: 647 SNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKI 706
           SN+++ +GKW+D  RVR  MK  G++K+ GCSW+E   +VH F+  D   P   ++    
Sbjct: 719 SNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETW 778

Query: 707 DEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNL 766
             + + I   GY PD    LH++EEE K   L  HSEKLA++FGLL   +G P+R++KNL
Sbjct: 779 RRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNL 838

Query: 767 RVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           R+CGDCH A K+IS V  R I++RD+ RFHHF+ G CSCGDYW
Sbjct: 839 RICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 881



 Score =  261 bits (668), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 189/641 (29%), Positives = 311/641 (48%), Gaps = 44/641 (6%)

Query: 68  FTWNT-MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM-Q 125
           F  NT +I  Y+  G   +++ +F++   KN F W++++  Y+   L  +A  +F ++  
Sbjct: 34  FVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELIS 93

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           +  ++P  +TL  V++ C+    L  G+  HG A K     + FV   L+ MY KC  + 
Sbjct: 94  VTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVE 153

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV--EGVESNQFTFPSILT 243
           EA  +F+  P+ +N V+W ++I G+S+NG+  ++   FR+M V  E    +  T  ++L 
Sbjct: 154 EAVKVFEHMPE-RNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLP 212

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
            CA     + G  VHG  +  G    + V ++LIDMY+KC  L  A+ L + ++  N VS
Sbjct: 213 VCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVS 272

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARD--IKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           WNSMI G+AR+        L +KM   D  +K D+FT  +VL       +L + K +H  
Sbjct: 273 WNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGY 332

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
             + G +  + V NA I  Y + G L  +  VF+LM  K V SW +L+ G A +    +A
Sbjct: 333 SWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKA 392

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           L  +  M  SG+ PD   + S+L AC+ +  L +G+++H   L++G      +  SL+ +
Sbjct: 393 LDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSL 452

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           Y  CG    A  +FD M  R +++W  +I G +QNG   EA+  + QML+ G +P  I  
Sbjct: 453 YICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAI 512

Query: 542 VGLLFACSH----------------AGLAENARWYFESMD------------KVYGIKPG 573
           + +  ACS                 A L E+       +D            +++     
Sbjct: 513 MCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLRE 572

Query: 574 PD--HYACMIDLLGRSGKLIEAKALLDQMVG---EPDATVWKALLSACRVHGDLELGERA 628
            D   +  +I   G  G+  EA  L ++M+    +PD   +  +L AC   G +E G   
Sbjct: 573 KDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEY 632

Query: 629 AN---NLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
            N   NL  +EP     Y  + +M   AG+ +DA R+ + M
Sbjct: 633 FNQMLNLHNIEP-KLEHYTCVVDMLGRAGRIDDALRLIEEM 672



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/418 (30%), Positives = 209/418 (50%), Gaps = 7/418 (1%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV-TGLVDMYAKCKCIFEAEYLFKMFPDG 197
           +L+ C  +  ++ G + H     +    N FV+ T ++ MY+ C    ++  +F      
Sbjct: 4   LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRR- 62

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILTACAAVSARDFGAQ 256
           KN   W  +++ Y++N     A+  F ++  V   + + FT P ++ ACA +     G  
Sbjct: 63  KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQI 122

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           +HG        ++V+V +ALI MY KCG ++ A ++ E+    N VSWNS+I GF+  GF
Sbjct: 123 IHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGF 182

Query: 317 HKEALSLFKKMHARDIKI--DDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
            +E+ + F++M   +     D  T  +VL   A   D+    +VH L VK G      VN
Sbjct: 183 LQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVN 242

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI--SG 432
           N+LIDMY+K   L  A ++F+    K+++SW S+I G A              M+   + 
Sbjct: 243 NSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAK 302

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
           +  D   + ++L  C E + L+  +++H    + G  S+  V N+ +  Y +CG +  + 
Sbjct: 303 MKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSE 362

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           RVFD M T+ V +W AL+ G AQN   ++AL  Y QM   G  PD+ T   LL ACS 
Sbjct: 363 RVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSR 420


>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
          Length = 803

 Score =  557 bits (1435), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 290/758 (38%), Positives = 447/758 (58%), Gaps = 23/758 (3%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           NT++  Y   G      K+F+    +N  +W+SLI    ++     A E F  M  E   
Sbjct: 50  NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE 109

Query: 131 PSQYTLDNVLRLCS---LKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           PS +TL +V+  CS   +   L  G+Q H Y ++   +LN+F++  LV MY K   +  +
Sbjct: 110 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASS 168

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
           + L   F  G++ V W T+++   QN    +A+E  R+M +EGVE ++FT  S+L AC+ 
Sbjct: 169 KVLLGSF-GGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSH 227

Query: 248 VSARDFGAQVHGCILSSG-FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-WN 305
           +     G ++H   L +G  + N +V SAL+DMY  C  + S RR+ +    D ++  WN
Sbjct: 228 LEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD-GMFDRKIGLWN 286

Query: 306 SMIVGFARQGFHKEALSLFKKMH-ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           +MI G+++    KEAL LF  M  +  +  +  T   V+     +   +  +++H  +VK
Sbjct: 287 AMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVK 346

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            G +  +FV N L+DMY++ G +D A  +F  M+D+D+++W ++ITG  +   +E+AL  
Sbjct: 347 RGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLL 406

Query: 425 FSDM------------RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
              M            R+S + P+ + + +IL +CA L+ L  G+++HA  +K+   + +
Sbjct: 407 LHKMQNLERKVSKGASRVS-LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDV 465

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
           +V ++LV +YAKCGC+  + +VFD +  ++VITW  +IM    +G G+EA+     M+ +
Sbjct: 466 AVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQ 525

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIE 592
           G KP+ +TF+ +  ACSH+G+ +     F  M   YG++P  DHYAC++DLLGR+G++ E
Sbjct: 526 GVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKE 585

Query: 593 AKALLDQMVGE-PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYS 651
           A  L++ M  +   A  W +LL A R+H +LE+GE AA NL +LEP  A  YV L+N+YS
Sbjct: 586 AYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYS 645

Query: 652 TAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIML 711
           +AG W+ A  VR+ MK +G+RKEPGCSW+E   +VH F++ D  HP    +   ++ +  
Sbjct: 646 SAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWE 705

Query: 712 LIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGD 771
            +++ GYVPD +  LHNVEE+ KEI L  HSEKLA+AFG+L    G  IR+ KNLRVC D
Sbjct: 706 RMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCND 765

Query: 772 CHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           CH A K+IS +  R IILRD  RFH FK G CSCGDYW
Sbjct: 766 CHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 803



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 152/527 (28%), Positives = 258/527 (48%), Gaps = 23/527 (4%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           + F  NT++A Y   G+L  +K L      ++  TW++++         +EA E   +M 
Sbjct: 148 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 207

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT-CFDLNAFVVTGLVDMYAKCKCI 184
           LEG  P ++T+ +VL  CS   +L+ G++ H YA+K    D N+FV + LVDMY  CK +
Sbjct: 208 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 267

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE-GVESNQFTFPSILT 243
                +F    D K  + W  MI GYSQN +  +A+  F  M    G+ +N  T   ++ 
Sbjct: 268 LSGRRVFDGMFDRKIGL-WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVP 326

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC    A      +HG ++  G + + +VQ+ L+DMY++ G +D A R+    E  + V+
Sbjct: 327 ACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVT 386

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKI-----------DDFTYPSVLNCFASNIDL 352
           WN+MI G+     H++AL L  KM   + K+           +  T  ++L   A+   L
Sbjct: 387 WNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSAL 446

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
              K +H+  +K        V +AL+DMYAK G L  +  VF+ +  K+VI+W  +I   
Sbjct: 447 AKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAY 506

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
             HG+ +EA+     M + G+ P+ V   S+ +AC+   +++ G ++  V     G    
Sbjct: 507 GMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPS 566

Query: 473 SVDNSLVL-VYAKCGCINDANRVFDSMHTRD---VITWTALIMGCAQNGKGKEALQFYDQ 528
           S   + V+ +  + G I +A ++ + M  RD      W++L +G ++     E  +   Q
Sbjct: 567 SDHYACVVDLLGRAGRIKEAYQLMN-MMPRDFNKAGAWSSL-LGASRIHNNLEIGEIAAQ 624

Query: 529 MLARGTKPDYIT-FVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
            L +  +P+  + +V L    S AGL + A     +M K  G++  P
Sbjct: 625 NLIQ-LEPNVASHYVLLANIYSSAGLWDKATEVRRNM-KEQGVRKEP 669



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 201/403 (49%), Gaps = 23/403 (5%)

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN-VYVQSALIDMYAKCG 284
           M V G++ + + FP++L A A +   + G Q+H  +   G+  + V V + L+++Y KCG
Sbjct: 1   MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60

Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
           D  +  ++ +     N+VSWNS+I         + AL  F+ M   +++   FT  SV+ 
Sbjct: 61  DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120

Query: 345 CFASNIDLNN----AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
              SN+ +       K VH+  ++ G E   F+ N L+ MY K G L  + ++      +
Sbjct: 121 A-CSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR 178

Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
           D+++W ++++    +    EAL+Y  +M + G+ PD   +SS+L AC+ L +L  G+++H
Sbjct: 179 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELH 238

Query: 461 AVFLKSGGCSSLS-VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKG 519
           A  LK+G     S V ++LV +Y  C  +    RVFD M  R +  W A+I G +QN   
Sbjct: 239 AYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHD 298

Query: 520 KEALQFYDQM-LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPGPDH 576
           KEAL  +  M  + G   +  T  G++ AC  +G        F   + ++G  +K G D 
Sbjct: 299 KEALLLFIGMEESAGLLANSTTMAGVVPACVRSG-------AFSRKEAIHGFVVKRGLDR 351

Query: 577 ----YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
                  ++D+  R GK+  A  +  +M  + D   W  +++ 
Sbjct: 352 DRFVQNTLMDMYSRLGKIDIAMRIFGKM-EDRDLVTWNTMITG 393



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 134/267 (50%), Gaps = 15/267 (5%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G + ++  DRD F  NT++  Y+  G++  A ++F +   ++  TW+++I GY       
Sbjct: 342 GFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHE 401

Query: 116 EAFELFWQMQ-LE----------GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCF 164
           +A  L  +MQ LE            +P+  TL  +L  C+    L +G++ H YAIK   
Sbjct: 402 DALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNL 461

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
             +  V + LVDMYAKC C+  +  +F   P  KN + W  +I  Y  +G G +AI+  R
Sbjct: 462 ATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQ-KNVITWNVIIMAYGMHGNGQEAIDLLR 520

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKC 283
            M V+GV+ N+ TF S+  AC+     D G ++   +    G E +    + ++D+  + 
Sbjct: 521 MMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRA 580

Query: 284 GDLDSARRLLEY--SEIDNEVSWNSMI 308
           G +  A +L+     + +   +W+S++
Sbjct: 581 GRIKEAYQLMNMMPRDFNKAGAWSSLL 607



 Score = 46.2 bits (108), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 42/194 (21%), Positives = 79/194 (40%), Gaps = 42/194 (21%)

Query: 21  GPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           G   + + + N++     +  ALVD ++  G +  + ++F+++  ++  TWN +I AY  
Sbjct: 449 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGM 508

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
            G  +                               EA +L   M ++G +P++ T  +V
Sbjct: 509 HGNGQ-------------------------------EAIDLLRMMMVQGVKPNEVTFISV 537

Query: 140 LRLCSLKGLLQRGEQF-----HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
              CS  G++  G +        Y ++   D  A V    VD+  +   I EA  L  M 
Sbjct: 538 FAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACV----VDLLGRAGRIKEAYQLMNMM 593

Query: 195 PDGKNHV-AWTTMI 207
           P   N   AW++++
Sbjct: 594 PRDFNKAGAWSSLL 607


>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  557 bits (1435), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 290/758 (38%), Positives = 447/758 (58%), Gaps = 23/758 (3%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           NT++  Y   G      K+F+    +N  +W+SLI    ++     A E F  M  E   
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE 196

Query: 131 PSQYTLDNVLRLCS---LKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           PS +TL +V+  CS   +   L  G+Q H Y ++   +LN+F++  LV MY K   +  +
Sbjct: 197 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASS 255

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
           + L   F  G++ V W T+++   QN    +A+E  R+M +EGVE ++FT  S+L AC+ 
Sbjct: 256 KVLLGSF-GGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSH 314

Query: 248 VSARDFGAQVHGCILSSG-FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-WN 305
           +     G ++H   L +G  + N +V SAL+DMY  C  + S RR+ +    D ++  WN
Sbjct: 315 LEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD-GMFDRKIGLWN 373

Query: 306 SMIVGFARQGFHKEALSLFKKMH-ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           +MI G+++    KEAL LF  M  +  +  +  T   V+     +   +  +++H  +VK
Sbjct: 374 AMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVK 433

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            G +  +FV N L+DMY++ G +D A  +F  M+D+D+++W ++ITG  +   +E+AL  
Sbjct: 434 RGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLL 493

Query: 425 FSDM------------RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
              M            R+S + P+ + + +IL +CA L+ L  G+++HA  +K+   + +
Sbjct: 494 LHKMQNLERKVSKGASRVS-LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDV 552

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
           +V ++LV +YAKCGC+  + +VFD +  ++VITW  +IM    +G G+EA+     M+ +
Sbjct: 553 AVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQ 612

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIE 592
           G KP+ +TF+ +  ACSH+G+ +     F  M   YG++P  DHYAC++DLLGR+G++ E
Sbjct: 613 GVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKE 672

Query: 593 AKALLDQMVGE-PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYS 651
           A  L++ M  +   A  W +LL A R+H +LE+GE AA NL +LEP  A  YV L+N+YS
Sbjct: 673 AYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYS 732

Query: 652 TAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIML 711
           +AG W+ A  VR+ MK +G+RKEPGCSW+E   +VH F++ D  HP    +   ++ +  
Sbjct: 733 SAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWE 792

Query: 712 LIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGD 771
            +++ GYVPD +  LHNVEE+ KEI L  HSEKLA+AFG+L    G  IR+ KNLRVC D
Sbjct: 793 RMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCND 852

Query: 772 CHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           CH A K+IS +  R IILRD  RFH FK G CSCGDYW
Sbjct: 853 CHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 152/527 (28%), Positives = 258/527 (48%), Gaps = 23/527 (4%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           + F  NT++A Y   G+L  +K L      ++  TW++++         +EA E   +M 
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT-CFDLNAFVVTGLVDMYAKCKCI 184
           LEG  P ++T+ +VL  CS   +L+ G++ H YA+K    D N+FV + LVDMY  CK +
Sbjct: 295 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 354

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILT 243
                +F    D K  + W  MI GYSQN +  +A+  F  M    G+ +N  T   ++ 
Sbjct: 355 LSGRRVFDGMFDRKIGL-WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVP 413

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC    A      +HG ++  G + + +VQ+ L+DMY++ G +D A R+    E  + V+
Sbjct: 414 ACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVT 473

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKI-----------DDFTYPSVLNCFASNIDL 352
           WN+MI G+     H++AL L  KM   + K+           +  T  ++L   A+   L
Sbjct: 474 WNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSAL 533

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
              K +H+  +K        V +AL+DMYAK G L  +  VF+ +  K+VI+W  +I   
Sbjct: 534 AKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAY 593

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
             HG+ +EA+     M + G+ P+ V   S+ +AC+   +++ G ++  V     G    
Sbjct: 594 GMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPS 653

Query: 473 SVDNSLVL-VYAKCGCINDANRVFDSMHTRD---VITWTALIMGCAQNGKGKEALQFYDQ 528
           S   + V+ +  + G I +A ++ + M  RD      W++L +G ++     E  +   Q
Sbjct: 654 SDHYACVVDLLGRAGRIKEAYQLMN-MMPRDFNKAGAWSSL-LGASRIHNNLEIGEIAAQ 711

Query: 529 MLARGTKPDYIT-FVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
            L +  +P+  + +V L    S AGL + A     +M K  G++  P
Sbjct: 712 NLIQ-LEPNVASHYVLLANIYSSAGLWDKATEVRRNM-KEQGVRKEP 756



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 211/426 (49%), Gaps = 23/426 (5%)

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
           W  ++    ++    +A+  + DM V G++ + + FP++L A A +   + G Q+H  + 
Sbjct: 65  WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124

Query: 263 SSGFEAN-VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEAL 321
             G+  + V V + L+++Y KCGD  +  ++ +     N+VSWNS+I         + AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184

Query: 322 SLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN----AKSVHSLIVKTGFEGYKFVNNAL 377
             F+ M   +++   FT  SV+    SN+ +       K VH+  ++ G E   F+ N L
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTA-CSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTL 242

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           + MY K G L  + ++      +D+++W ++++    +    EAL+Y  +M + G+ PD 
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS-VDNSLVLVYAKCGCINDANRVFD 496
             +SS+L AC+ L +L  G+++HA  LK+G     S V ++LV +Y  C  +    RVFD
Sbjct: 303 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362

Query: 497 SMHTRDVITWTALIMGCAQNGKGKEALQFYDQM-LARGTKPDYITFVGLLFACSHAGLAE 555
            M  R +  W A+I G +QN   KEAL  +  M  + G   +  T  G++ AC  +G   
Sbjct: 363 GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG--- 419

Query: 556 NARWYFESMDKVYG--IKPGPDH----YACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
                F   + ++G  +K G D        ++D+  R GK+  A  +  +M  + D   W
Sbjct: 420 ----AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM-EDRDLVTW 474

Query: 610 KALLSA 615
             +++ 
Sbjct: 475 NTMITG 480



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 134/267 (50%), Gaps = 15/267 (5%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G + ++  DRD F  NT++  Y+  G++  A ++F +   ++  TW+++I GY       
Sbjct: 429 GFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHE 488

Query: 116 EAFELFWQMQ-LE----------GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCF 164
           +A  L  +MQ LE            +P+  TL  +L  C+    L +G++ H YAIK   
Sbjct: 489 DALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNL 548

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
             +  V + LVDMYAKC C+  +  +F   P  KN + W  +I  Y  +G G +AI+  R
Sbjct: 549 ATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQ-KNVITWNVIIMAYGMHGNGQEAIDLLR 607

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKC 283
            M V+GV+ N+ TF S+  AC+     D G ++   +    G E +    + ++D+  + 
Sbjct: 608 MMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRA 667

Query: 284 GDLDSARRLLEY--SEIDNEVSWNSMI 308
           G +  A +L+     + +   +W+S++
Sbjct: 668 GRIKEAYQLMNMMPRDFNKAGAWSSLL 694



 Score = 46.2 bits (108), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 42/194 (21%), Positives = 79/194 (40%), Gaps = 42/194 (21%)

Query: 21  GPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           G   + + + N++     +  ALVD ++  G +  + ++F+++  ++  TWN +I AY  
Sbjct: 536 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGM 595

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
            G  +                               EA +L   M ++G +P++ T  +V
Sbjct: 596 HGNGQ-------------------------------EAIDLLRMMMVQGVKPNEVTFISV 624

Query: 140 LRLCSLKGLLQRGEQF-----HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
              CS  G++  G +        Y ++   D  A V    VD+  +   I EA  L  M 
Sbjct: 625 FAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACV----VDLLGRAGRIKEAYQLMNMM 680

Query: 195 PDGKNHV-AWTTMI 207
           P   N   AW++++
Sbjct: 681 PRDFNKAGAWSSLL 694


>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score =  557 bits (1435), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 292/754 (38%), Positives = 434/754 (57%), Gaps = 2/754 (0%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
              +  S+ D    + +   Y +  ++  A++LF+E P  +   W+ +I  Y+  G    
Sbjct: 33  HFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDG 92

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
           A +L+  M   G RP++YT   VL+ CS    ++ G + H +A     + + FV T LVD
Sbjct: 93  AIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVD 152

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
            YAKC  + EA+ LF      ++ VAW  MI G S  G    A++    M+ EG+  N  
Sbjct: 153 FYAKCGILVEAQRLFSSMSH-RDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSS 211

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           T   +L       A   G  +HG  +   F+  V V + L+DMYAKC  L  AR++ +  
Sbjct: 212 TIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVM 271

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNIDLNNA 355
            + NEVSW++MI G+      KEAL LF +M  +D +     T  SVL   A   DL+  
Sbjct: 272 GVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRG 331

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           + +H  I+K G      + N L+ MYAK G +D A   F+ M  KD +S++++++GC  +
Sbjct: 332 RKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQN 391

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G+   AL  F  M++SGI PD   +  +L AC+ L  L+ G   H   +  G  +   + 
Sbjct: 392 GNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLIC 451

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           N+L+ +Y+KCG I+ A  VF+ M   D+++W A+I+G   +G G EAL  +  +LA G K
Sbjct: 452 NALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLK 511

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           PD ITF+ LL +CSH+GL    R +F++M + + I P  +H  CM+D+LGR+G + EA  
Sbjct: 512 PDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHH 571

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
            +  M  EPD  +W ALLSACR+H ++ELGE  +  +  L P +   +V LSN+YS AG+
Sbjct: 572 FIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGR 631

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
           W+DAA +R   K  G++K PGCSW+E N  VH F+  D+ H   + I  K++E+++ +K 
Sbjct: 632 WDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKR 691

Query: 716 AGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
            GY  + +F   +VEEE KE  L YHSEKLA+AFG+L L  G PI + KNLRVCGDCHTA
Sbjct: 692 LGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTA 751

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +K+++ +  R I +RD+NRFHHFK G C+CGD+W
Sbjct: 752 IKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 785



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 184/385 (47%), Gaps = 9/385 (2%)

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           +L AC    +     ++H   L +   A+  V   L  +Y  C  +  ARRL +     +
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
            + WN +I  +A  G    A+ L+  M    ++ + +TYP VL   +  + + +   +HS
Sbjct: 74  VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
                G E   FV  AL+D YAK G L  A  +F+ M  +DV++W ++I GC+ +G  ++
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
           A++    M+  GICP+   +  +L    E   L  G+ +H   ++    + + V   L+ 
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLD 253

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR-GTKPDYI 539
           +YAKC C+  A ++FD M  R+ ++W+A+I G   +   KEAL+ +DQM+ +    P  +
Sbjct: 254 MYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPV 313

Query: 540 TFVGLLFACSHAGLAENAR---WYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           T   +L AC+        R    Y   +  V  I  G      ++ +  + G + +A   
Sbjct: 314 TLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNT----LLSMYAKCGVIDDAIRF 369

Query: 597 LDQMVGEPDATVWKALLSACRVHGD 621
            D+M    D+  + A++S C  +G+
Sbjct: 370 FDEM-NPKDSVSFSAIVSGCVQNGN 393



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 146/332 (43%), Gaps = 13/332 (3%)

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
           Y  +L     +  L  AK +H   +K        V + L  +Y     +  A  +F+ + 
Sbjct: 11  YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIP 70

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
           +  VI W  +I   A++G ++ A+  +  M   G+ P+      +L AC+ L  +E G +
Sbjct: 71  NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE 130

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK 518
           +H+     G  S + V  +LV  YAKCG + +A R+F SM  RDV+ W A+I GC+  G 
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACSHA-----GLAENARWYFESMDKVYGIKPG 573
             +A+Q   QM   G  P+  T VG+L     A     G A +      S D    +  G
Sbjct: 191 CDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTG 250

Query: 574 PDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLF 633
                 ++D+  +   L+ A+ + D M G  +   W A++        ++      + + 
Sbjct: 251 ------LLDMYAKCQCLLYARKIFDVM-GVRNEVSWSAMIGGYVASDCMKEALELFDQMI 303

Query: 634 ELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
             + M+  P V L ++     K  D +R RKL
Sbjct: 304 LKDAMDPTP-VTLGSVLRACAKLTDLSRGRKL 334



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 3/156 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G L  +    D    N +I  Y+  G++  A+++FN     +  +W+++I GY  +GL +
Sbjct: 437 GYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGM 496

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV--VTG 173
           EA  LF  +   G +P   T   +L  CS  GL+  G  +   A+   F +   +     
Sbjct: 497 EALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFD-AMSRDFSIVPRMEHCIC 555

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
           +VD+  +   I EA +  +  P   +   W+ +++ 
Sbjct: 556 MVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSA 591


>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
 gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  556 bits (1434), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 290/758 (38%), Positives = 447/758 (58%), Gaps = 23/758 (3%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           NT++  Y   G      K+F+    +N  +W+SLI    ++     A E F  M  E   
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE 196

Query: 131 PSQYTLDNVLRLCS---LKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           PS +TL +V+  CS   +   L  G+Q H Y ++   +LN+F++  LV MY K   +  +
Sbjct: 197 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASS 255

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
           + L   F  G++ V W T+++   QN    +A+E  R+M +EGVE ++FT  S+L AC+ 
Sbjct: 256 KVLLGSF-GGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSH 314

Query: 248 VSARDFGAQVHGCILSSG-FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-WN 305
           +     G ++H   L +G  + N +V SAL+DMY  C  + S RR+ +    D ++  WN
Sbjct: 315 LEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD-GMFDRKIGLWN 373

Query: 306 SMIVGFARQGFHKEALSLFKKMH-ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           +MI G+++    KEAL LF  M  +  +  +  T   V+     +   +  +++H  +VK
Sbjct: 374 AMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVK 433

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            G +  +FV N L+DMY++ G +D A  +F  M+D+D+++W ++ITG  +   +E+AL  
Sbjct: 434 RGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLL 493

Query: 425 FSDM------------RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
              M            R+S + P+ + + +IL +CA L+ L  G+++HA  +K+   + +
Sbjct: 494 LHKMQNLERKVSKGASRVS-LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDV 552

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
           +V ++LV +YAKCGC+  + +VFD +  ++VITW  +IM    +G G+EA+     M+ +
Sbjct: 553 AVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQ 612

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIE 592
           G KP+ +TF+ +  ACSH+G+ +     F  M   YG++P  DHYAC++DLLGR+G++ E
Sbjct: 613 GVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKE 672

Query: 593 AKALLDQMVGE-PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYS 651
           A  L++ M  +   A  W +LL A R+H +LE+GE AA NL +LEP  A  YV L+N+YS
Sbjct: 673 AYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYS 732

Query: 652 TAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIML 711
           +AG W+ A  VR+ MK +G+RKEPGCSW+E   +VH F++ D  HP    +   ++ +  
Sbjct: 733 SAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWE 792

Query: 712 LIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGD 771
            +++ GYVPD +  LHNVEE+ KEI L  HSEKLA+AFG+L    G  IR+ KNLRVC D
Sbjct: 793 RMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCND 852

Query: 772 CHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           CH A K+IS +  R IILRD  RFH FK G CSCGDYW
Sbjct: 853 CHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 152/527 (28%), Positives = 258/527 (48%), Gaps = 23/527 (4%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           + F  NT++A Y   G+L  +K L      ++  TW++++         +EA E   +M 
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT-CFDLNAFVVTGLVDMYAKCKCI 184
           LEG  P ++T+ +VL  CS   +L+ G++ H YA+K    D N+FV + LVDMY  CK +
Sbjct: 295 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 354

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILT 243
                +F    D K  + W  MI GYSQN +  +A+  F  M    G+ +N  T   ++ 
Sbjct: 355 LSGRRVFDGMFDRKIGL-WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVP 413

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC    A      +HG ++  G + + +VQ+ L+DMY++ G +D A R+    E  + V+
Sbjct: 414 ACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVT 473

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKI-----------DDFTYPSVLNCFASNIDL 352
           WN+MI G+     H++AL L  KM   + K+           +  T  ++L   A+   L
Sbjct: 474 WNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSAL 533

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
              K +H+  +K        V +AL+DMYAK G L  +  VF+ +  K+VI+W  +I   
Sbjct: 534 AKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAY 593

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
             HG+ +EA+     M + G+ P+ V   S+ +AC+   +++ G ++  V     G    
Sbjct: 594 GMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPS 653

Query: 473 SVDNSLVL-VYAKCGCINDANRVFDSMHTRD---VITWTALIMGCAQNGKGKEALQFYDQ 528
           S   + V+ +  + G I +A ++ + M  RD      W++L +G ++     E  +   Q
Sbjct: 654 SDHYACVVDLLGRAGRIKEAYQLMN-MMPRDFNKAGAWSSL-LGASRIHNNLEIGEIAAQ 711

Query: 529 MLARGTKPDYIT-FVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
            L +  +P+  + +V L    S AGL + A     +M K  G++  P
Sbjct: 712 NLIQ-LEPNVASHYVLLANIYSSAGLWDKATEVRRNM-KEQGVRKEP 756



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 211/426 (49%), Gaps = 23/426 (5%)

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
           W  ++    ++    +A+  + DM V G++ + + FP++L A A +   + G Q+H  + 
Sbjct: 65  WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124

Query: 263 SSGFEAN-VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEAL 321
             G+  + V V + L+++Y KCGD  +  ++ +     N+VSWNS+I         + AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184

Query: 322 SLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN----AKSVHSLIVKTGFEGYKFVNNAL 377
             F+ M   +++   FT  SV+    SN+ +       K VH+  ++ G E   F+ N L
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTA-CSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTL 242

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           + MY K G L  + ++      +D+++W ++++    +    EAL+Y  +M + G+ PD 
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS-VDNSLVLVYAKCGCINDANRVFD 496
             +SS+L AC+ L +L  G+++HA  LK+G     S V ++LV +Y  C  +    RVFD
Sbjct: 303 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362

Query: 497 SMHTRDVITWTALIMGCAQNGKGKEALQFYDQM-LARGTKPDYITFVGLLFACSHAGLAE 555
            M  R +  W A+I G +QN   KEAL  +  M  + G   +  T  G++ AC  +G   
Sbjct: 363 GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG--- 419

Query: 556 NARWYFESMDKVYG--IKPGPDH----YACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
                F   + ++G  +K G D        ++D+  R GK+  A  +  +M  + D   W
Sbjct: 420 ----AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM-EDRDLVTW 474

Query: 610 KALLSA 615
             +++ 
Sbjct: 475 NTMITG 480



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 134/267 (50%), Gaps = 15/267 (5%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G + ++  DRD F  NT++  Y+  G++  A ++F +   ++  TW+++I GY       
Sbjct: 429 GFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHE 488

Query: 116 EAFELFWQMQ-LE----------GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCF 164
           +A  L  +MQ LE            +P+  TL  +L  C+    L +G++ H YAIK   
Sbjct: 489 DALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNL 548

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
             +  V + LVDMYAKC C+  +  +F   P  KN + W  +I  Y  +G G +AI+  R
Sbjct: 549 ATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQ-KNVITWNVIIMAYGMHGNGQEAIDLLR 607

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKC 283
            M V+GV+ N+ TF S+  AC+     D G ++   +    G E +    + ++D+  + 
Sbjct: 608 MMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRA 667

Query: 284 GDLDSARRLLEY--SEIDNEVSWNSMI 308
           G +  A +L+     + +   +W+S++
Sbjct: 668 GRIKEAYQLMNMMPRDFNKAGAWSSLL 694



 Score = 46.2 bits (108), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 42/194 (21%), Positives = 79/194 (40%), Gaps = 42/194 (21%)

Query: 21  GPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           G   + + + N++     +  ALVD ++  G +  + ++F+++  ++  TWN +I AY  
Sbjct: 536 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGM 595

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
            G  +                               EA +L   M ++G +P++ T  +V
Sbjct: 596 HGNGQ-------------------------------EAIDLLRMMMVQGVKPNEVTFISV 624

Query: 140 LRLCSLKGLLQRGEQF-----HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
              CS  G++  G +        Y ++   D  A V    VD+  +   I EA  L  M 
Sbjct: 625 FAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACV----VDLLGRAGRIKEAYQLMNMM 680

Query: 195 PDGKNHV-AWTTMI 207
           P   N   AW++++
Sbjct: 681 PRDFNKAGAWSSLL 694


>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 291/775 (37%), Positives = 449/775 (57%), Gaps = 4/775 (0%)

Query: 37  SDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK 96
           S  N  L D   + +I +A QLF++M  R+  + N M++ Y  S  L  A++LF     +
Sbjct: 47  SRFNFKLKDLVRANQIAKARQLFDEMPYRNTSSVNMMVSGYVKSRNLFRARELFESMFSR 106

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
           N  +W+ +I GYS      EAF L+ +M   G +P   T   +L        L+   Q H
Sbjct: 107 NEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIH 166

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
            + I+  F  +  V   LVD Y K  C+  A  LF   P  K+ V++  MITGY++ G+ 
Sbjct: 167 SHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMP-TKDSVSFNVMITGYTKYGFR 225

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
            +A++ F  MR    + + FTF ++L          FG Q+HG  + + +  +++V +AL
Sbjct: 226 EEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANAL 285

Query: 277 IDMYAKCGDLDSARRLL-EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           +D Y+K   +D A+ L  E  E+D  VS+N +I G+A  G ++++  LFK++        
Sbjct: 286 LDFYSKHDYIDLAKNLFDEMPELDG-VSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRK 344

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
           +F + ++L+  A  ++L+  +  H+  V T       V NAL+DMYAK    + A  +F 
Sbjct: 345 NFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFA 404

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
            +  ++ + WT++I+     G +EEALK F +M    +  D    +S L A A L  +  
Sbjct: 405 NLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSL 464

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
           G+Q+H+  ++ G  SS+   + LV +YA CG + DA  VF  M  R+++ W ALI   +Q
Sbjct: 465 GKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQ 524

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
           NG  +     +  M+  G  PD ++F+ +L ACSH GL E A WYF SM +VY + P   
Sbjct: 525 NGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRK 584

Query: 576 HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
           HYA MID+L RSG+  EA+ L+ +M  EPD  +W ++L++CR+H + +L ++AA+ LF++
Sbjct: 585 HYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKM 644

Query: 636 EPM-NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDR 694
           + + +A  YV +SN+Y+ AGKWE+AA+V+K M+ RG++K    SWVE + +VH+F + DR
Sbjct: 645 DALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTANDR 704

Query: 695 GHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTL 754
            HP    I  KI+ ++ L+ + GY PD +  L NV+EE K   L YHSE+LA+AF L+  
Sbjct: 705 THPQTEQIRRKINSLVELMDKEGYKPDTSCTLQNVDEEMKIESLKYHSERLAIAFALINT 764

Query: 755 PQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           P+G+PI I KNLR C DCH A+K IS +  R I +RDS+RFHHF+ G+CSCGDYW
Sbjct: 765 PEGSPIIIMKNLRACVDCHAAIKVISKIVGREITVRDSSRFHHFRDGSCSCGDYW 819


>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 302/817 (36%), Positives = 464/817 (56%), Gaps = 50/817 (6%)

Query: 42   ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE-------- 92
            ALV+ ++  G I EA  LF+ M  RD   WN M+ AY ++G   EA  LF+E        
Sbjct: 767  ALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRP 826

Query: 93   ------------TPFKNFFTWSS----------LIYGYSNYGLDIEAFE--LFWQMQ--- 125
                           +N   W             +Y   + G D+ A+   L W +Q   
Sbjct: 827  DDVTLCTLARVVKSKQNVLEWQLKQLKAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGE 886

Query: 126  ----------LEGYRPSQYTLDNVLRLCSLKGL--LQRGEQFHGYAIKTCFDLNAFVVTG 173
                      +   R +   L  V+ L  + GL  L+ G+Q HG  +++  D    V   
Sbjct: 887  TWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNC 946

Query: 174  LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
            L++MY K   +  A  +F    +  + V+W TMI+G + +G    ++  F D+   G+  
Sbjct: 947  LINMYVKTGSVSRARTVFWQMNE-VDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLP 1005

Query: 234  NQFTFPSILTACAAVSAR-DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
            +QFT  S+L AC+++        Q+H C + +G   + +V + LID+Y+K G ++ A  L
Sbjct: 1006 DQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFL 1065

Query: 293  LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
                +  +  SWN+M+ G+   G   +AL L+  M     + +  T  +        + L
Sbjct: 1066 FVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGL 1125

Query: 353  NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
               K + +++VK GF    FV + ++DMY K G ++ A  +FN +   D ++WT++I+GC
Sbjct: 1126 KQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGC 1185

Query: 413  AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
              +G  E AL  +  MR+S + PD    ++++ AC+ LT LE G+Q+HA  +K       
Sbjct: 1186 VENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDP 1245

Query: 473  SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
             V  SLV +YAKCG I DA  +F   +T  + +W A+I+G AQ+G  +EALQF+++M +R
Sbjct: 1246 FVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSR 1305

Query: 533  GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIE 592
            G  PD +TF+G+L ACSH+GL   A   F SM K+YGI+P  +HY+C++D L R+G++ E
Sbjct: 1306 GVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIRE 1365

Query: 593  AKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYST 652
            A+ ++  M  E  A++++ LL+ACRV  D E G+R A  L  LEP ++  YV LSN+Y+ 
Sbjct: 1366 AEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAA 1425

Query: 653  AGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLL 712
            A +WE+ A  R +M+   ++K+PG SWV+  ++VH+F++ DR H     IY+K++ IM  
Sbjct: 1426 ANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKR 1485

Query: 713  IKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDC 772
            I+E GY+PD +FAL +VEEE KE  L YHSEKLA+A+GL+  P    +R+ KNLRVCGDC
Sbjct: 1486 IREEGYLPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDC 1545

Query: 773  HTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            H A+KYIS V+ R ++LRD+NRFHHF++G CSCGDYW
Sbjct: 1546 HNAIKYISKVFEREVVLRDANRFHHFRSGVCSCGDYW 1582



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 156/564 (27%), Positives = 272/564 (48%), Gaps = 34/564 (6%)

Query: 67   GFTWNTMIAA-----YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELF 121
            G  W+  +A      YA  GR+REA+ LF+    ++   W+ ++  Y + GL+ EA  LF
Sbjct: 757  GLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLF 816

Query: 122  WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
             +    G RP   TL      C+L  +++  +    + +K                  + 
Sbjct: 817  SEFNRTGLRPDDVTL------CTLARVVKSKQNVLEWQLK------------------QL 852

Query: 182  KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
            K      +++    DG + +AW   ++ + Q G  ++A++CF DM    V  +  TF  +
Sbjct: 853  KAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVM 912

Query: 242  LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL-EYSEIDN 300
            L+  A ++  + G Q+HG ++ SG +  V V + LI+MY K G +  AR +  + +E+D 
Sbjct: 913  LSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVD- 971

Query: 301  EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVH 359
             VSWN+MI G A  G  + ++ +F  +    +  D FT  SVL  C +     + A  +H
Sbjct: 972  LVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIH 1031

Query: 360  SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
            +  +K G     FV+  LID+Y+K G ++ A  +F      D+ SW +++ G    G + 
Sbjct: 1032 ACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFP 1091

Query: 420  EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
            +AL+ +  M+ SG   + + +++   A   L  L+ G+Q+ AV +K G    L V + ++
Sbjct: 1092 KALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVL 1151

Query: 480  LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
             +Y KCG +  A R+F+ + + D + WT +I GC +NG+ + AL  Y  M     +PD  
Sbjct: 1152 DMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEY 1211

Query: 540  TFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ 599
            TF  L+ ACS     E  R    +  K+      P     ++D+  + G + +A+ L  +
Sbjct: 1212 TFATLVKACSLLTALEQGRQIHANTVKL-NCAFDPFVMTSLVDMYAKCGNIEDARGLFKR 1270

Query: 600  MVGEPDATVWKALLSACRVHGDLE 623
                  A+ W A++     HG+ E
Sbjct: 1271 TNTSRIAS-WNAMIVGLAQHGNAE 1293



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 147/570 (25%), Positives = 259/570 (45%), Gaps = 49/570 (8%)

Query: 66   DGFTWNTMIAAYANSGRLREAKKLFNETP--FKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
            D F  N +I  Y+  G L  A+KLF+ TP   ++  TW++++  +++   D   F LF  
Sbjct: 660  DRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHADKARD--GFHLFRL 717

Query: 124  MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
            ++      +++TL  V ++C L       E  HGYA+K     + FV   LV++YAK   
Sbjct: 718  LRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGR 777

Query: 184  IFEAEYLFKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
            I EA  LF    DG   ++ V W  M+  Y   G  ++A+  F +    G+  +  T   
Sbjct: 778  IREARVLF----DGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTL-- 831

Query: 241  ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI-- 298
                               C L+   ++   V    +      G      +L  Y +   
Sbjct: 832  -------------------CTLARVVKSKQNVLEWQLKQLKAYGT-----KLFMYDDDDD 867

Query: 299  -DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
              + ++WN  +  F ++G   EA+  F  M    +  D  T+  +L+  A    L   K 
Sbjct: 868  GSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQ 927

Query: 358  VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
            +H ++V++G +    V N LI+MY K G++  A  VF  M + D++SW ++I+GCA  G 
Sbjct: 928  IHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGL 987

Query: 418  YEEALKYFSDMRISGICPDHVVVSSILSACAEL-TVLEFGQQVHAVFLKSGGCSSLSVDN 476
             E ++  F D+   G+ PD   V+S+L AC+ L        Q+HA  +K+G      V  
Sbjct: 988  EECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVST 1047

Query: 477  SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
            +L+ VY+K G + +A  +F +    D+ +W A++ G   +G   +AL+ Y  M   G + 
Sbjct: 1048 TLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERA 1107

Query: 537  DYITFVGLLFACSH-AGLAENARWYFESMDKVYGIKPGPDHYAC--MIDLLGRSGKLIEA 593
            + IT      A     GL +  +     + + + +    D +    ++D+  + G++  A
Sbjct: 1108 NQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNL----DLFVISGVLDMYLKCGEMESA 1163

Query: 594  KALLDQMVGEPDATVWKALLSACRVHGDLE 623
            + + ++ +  PD   W  ++S C  +G  E
Sbjct: 1164 RRIFNE-IPSPDDVAWTTMISGCVENGQEE 1192



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 130/504 (25%), Positives = 219/504 (43%), Gaps = 40/504 (7%)

Query: 138  NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD- 196
            ++LR       L  G++ H   + +    + F+   L+ MY+KC  +  A  LF   PD 
Sbjct: 631  SILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDT 690

Query: 197  GKNHVAWTTMITGYSQNGY-GFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGA 255
             ++ V W  +++ ++     GF     FR +R   V + + T   +   C   ++     
Sbjct: 691  SRDLVTWNAILSAHADKARDGF---HLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAE 747

Query: 256  QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
             +HG  +  G + +V+V  AL+++YAK G +  AR L +   + + V WN M+  +   G
Sbjct: 748  SLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTG 807

Query: 316  FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
               EAL LF + +   ++ DD T  ++     S  +          +++   +  K    
Sbjct: 808  LEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQN----------VLEWQLKQLKAYGT 857

Query: 376  ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
             L             FM  +     DVI+W   ++     G   EA+  F DM  S +  
Sbjct: 858  KL-------------FMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVAC 904

Query: 436  DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
            D +    +LS  A L  LE G+Q+H + ++SG    +SV N L+ +Y K G ++ A  VF
Sbjct: 905  DGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVF 964

Query: 496  DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAE 555
              M+  D+++W  +I GCA +G  + ++  +  +L  G  PD  T   +L ACS  G   
Sbjct: 965  WQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGC 1024

Query: 556  NARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
            +      +     G+         +ID+  +SGK+ EA+ L     G  D   W A++  
Sbjct: 1025 HLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGF-DLASWNAMMHG 1083

Query: 616  CRVHGDL-----------ELGERA 628
              V GD            E GERA
Sbjct: 1084 YIVSGDFPKALRLYILMQESGERA 1107


>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 921

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 301/798 (37%), Positives = 446/798 (55%), Gaps = 46/798 (5%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +  +G+I  A +LF+ M  RD  +WN+M+  Y +S ++ +A  LF + P +N  TW+ +I
Sbjct: 136 YVQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMI 195

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG--EQFHGYAIKTC 163
            GY       + +++F  M  EG  P Q    +VL   ++ GL   G  E      +KT 
Sbjct: 196 SGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVL--SAVTGLQDLGVLEVLRPLVLKTG 253

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
           F+ +  + T ++++Y +     +    F      +N   W+TMI   S  G    AI  +
Sbjct: 254 FESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVY 313

Query: 224 RDMRVEGVESNQFTFPSILTACAAVS-ARDFGAQVHGCILSSGFEANVYVQSALIDMYAK 282
               V+ + S Q    + L  C  ++ AR    Q+   I+ S         +A+I  Y +
Sbjct: 314 GRDPVKSIPS-QTALLTGLARCGRITEARILFEQIPDPIVVS--------WNAMITGYMQ 364

Query: 283 CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
            G +D A+ L +     N +SW  MI G+A+ G  +EAL L + +H   +     +  S 
Sbjct: 365 NGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSS 424

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ---- 398
               +    L   + VHSL VK G +   +V NALI MY K  N++    VFN M+    
Sbjct: 425 FLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDT 484

Query: 399 ---------------------------DKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
                                       +DV+SWT++I+  A     +EA+++F  M   
Sbjct: 485 VSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHE 544

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
              P+  +++ +LS C  L   + GQQ+H V +K G  S L V N+L+ +Y KCGC  D+
Sbjct: 545 HEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCA-DS 603

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
           ++VFDSM  RD+ TW   I GCAQ+G G+EA++ Y+ M + G  P+ +TFVGLL ACSHA
Sbjct: 604 HKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHA 663

Query: 552 GLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKA 611
           GL +    +F+SM + YG+ P  +HYACM+DLLGR+G +  A+  +  M  EPD  +W A
Sbjct: 664 GLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSA 723

Query: 612 LLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
           LL AC++H + E+G RAA  LF  EP NA  YV LSN+YS+ G W + A +RK+MK RG+
Sbjct: 724 LLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGV 783

Query: 672 RKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEE 731
            KEPGCSW++  ++VH F++ D+ H    +I   + ++  L++  GYVPD  F LH+++E
Sbjct: 784 SKEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDTEFVLHDIDE 843

Query: 732 EGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRD 791
           E KE  L YHSEKLAVA+GLL  P+G PI+I KNLR+CGDCHT +K++S V  R I +RD
Sbjct: 844 EQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFIKFVSHVTKRDIDIRD 903

Query: 792 SNRFHHFKAGNCSCGDYW 809
            NRFHHF+ G+CSCGD+W
Sbjct: 904 GNRFHHFRNGSCSCGDFW 921



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 178/671 (26%), Positives = 298/671 (44%), Gaps = 80/671 (11%)

Query: 35  PASDLNRALVDFSNS---------GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLRE 85
           P   ++RAL   ++S         G + EA ++F+ M  RD   WN+MI+AY NSG L +
Sbjct: 23  PVRSVHRALDKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLED 82

Query: 86  AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLD-NVLRLCS 144
           A+ LF+     N  T + L+ GY+  G  ++A  +F  M      P + T+  N +  C 
Sbjct: 83  ARILFDAISGGNVRTATILLSGYARLGRVLDARRVFDGM------PERNTVAWNAMVSCY 136

Query: 145 LKG--LLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVA 202
           ++   +      F     +     N+ +VTG    Y   + + +A  LFK  P  +N V 
Sbjct: 137 VQNGDITMARRLFDAMPSRDVTSWNS-MVTG----YCHSRQMVDAWNLFKQMPQ-RNLVT 190

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
           WT MI+GY +     K  + FR M  EG   +Q  F S+L+A   +        +   +L
Sbjct: 191 WTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVL 250

Query: 263 SSGFEANVYVQSALIDMYAK-CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEAL 321
            +GFE++V + ++++++Y +    LD A +  +     NE +W++MI   +  G    A+
Sbjct: 251 KTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAI 310

Query: 322 SLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMY 381
           +++ +   + I     +  ++L   A    +  A+ +   I       +    NA+I  Y
Sbjct: 311 AVYGRDPVKSIP----SQTALLTGLARCGRITEARILFEQIPDPIVVSW----NAMITGY 362

Query: 382 AKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVS 441
            + G +D A  +F+ M  ++ ISW  +I G A +G  EEAL     +  +G+ P    ++
Sbjct: 363 MQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLT 422

Query: 442 SILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC---------------- 485
           S   AC+ +  LE G+QVH++ +K+G   +  V N+L+ +Y KC                
Sbjct: 423 SSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVK 482

Query: 486 ---------------GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
                            + DA  +FD+M +RDV++WT +I   AQ  +G EA++F+  ML
Sbjct: 483 DTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTML 542

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGR---S 587
               KP+      LL  C   G A+              IK G D    + + L      
Sbjct: 543 HEHEKPNSPILTILLSVCGGLGSAK-----LGQQIHTVAIKHGMDSELIVANALMSMYFK 597

Query: 588 GKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP----Y 643
               ++  + D M  E D   W   ++ C  HG   LG  A      +E +  +P    +
Sbjct: 598 CGCADSHKVFDSM-EERDIFTWNTFITGCAQHG---LGREAIKMYEHMESVGVLPNEVTF 653

Query: 644 VQLSNMYSTAG 654
           V L N  S AG
Sbjct: 654 VGLLNACSHAG 664



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/501 (25%), Positives = 230/501 (45%), Gaps = 71/501 (14%)

Query: 31  NSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF 90
           + VK        L   +  G I EA  LFE++ D    +WN MI  Y  +G + EAK+LF
Sbjct: 316 DPVKSIPSQTALLTGLARCGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELF 375

Query: 91  NETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQ 150
           +  PF+N  +W+ +I GY+  G   EA +L   +   G  PS  +L +    CS  G L+
Sbjct: 376 DRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALE 435

Query: 151 RGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF------------------- 191
            G Q H  A+K     N++V   L+ MY KC+ +     +F                   
Sbjct: 436 TGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALV 495

Query: 192 --KMFPDG---------KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
              M  D          ++ V+WTT+I+ Y+Q   G +A+E F+ M  E  + N      
Sbjct: 496 QNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTI 555

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           +L+ C  + +   G Q+H   +  G ++ + V +AL+ MY KCG  DS  ++ +  E  +
Sbjct: 556 LLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCADS-HKVFDSMEERD 614

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
             +WN+ I G A+ G  +EA+ +++ M +  +  ++ T+  +LN  +           H+
Sbjct: 615 IFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACS-----------HA 663

Query: 361 LIVKTGFEGYKFVNN------------ALIDMYAKQGNLDCA-FMVFNLMQDKDVISWTS 407
            +V  G++ +K ++              ++D+  + G++  A   ++++  + D + W++
Sbjct: 664 GLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSA 723

Query: 408 LITGCAYHGSYE----EALKYFSDMRISGICPDHVVVSSILSA------CAELTVLEFGQ 457
           L+  C  H + E     A K F+    +    ++V++S+I S+       AEL  +   +
Sbjct: 724 LLGACKIHKNAEIGRRAAEKLFTTEPSNA--GNYVMLSNIYSSLGMWVEVAELRKIMKQR 781

Query: 458 QVHAVFLKSGGCSSLSVDNSL 478
            V     K  GCS + + N +
Sbjct: 782 GVS----KEPGCSWMQIRNKV 798


>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 292/739 (39%), Positives = 440/739 (59%), Gaps = 6/739 (0%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +I+ +     + EA ++F     K    + +++ GY+      +A   + +M+ +   P 
Sbjct: 82  LISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPV 141

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
            Y    +L+L      L+RG + HG  I   F  N F +T +V++YAKC+ I +A  +F+
Sbjct: 142 VYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFE 201

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
             P  ++ V+W T++ GY+QNG+  +A++    M+  G + +  T  S+L A A + A  
Sbjct: 202 RMPQ-RDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALR 260

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G  +HG    +GFE  V V +A++D Y KCG + SAR + +     N VSWN+MI G+A
Sbjct: 261 IGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYA 320

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI--VKTGFEGY 370
           + G  +EA + F KM    ++  + +    L+  A+  DL   + VH L+   K GF+  
Sbjct: 321 QNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFD-- 378

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
             V N+LI MY+K   +D A  VF  ++ K V++W ++I G A +G   EAL  F +M+ 
Sbjct: 379 VSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQS 438

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
             I PD   + S+++A A+L+V    + +H + +++    ++ V  +L+  +AKCG I  
Sbjct: 439 HDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQT 498

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           A ++FD M  R VITW A+I G   NG G+EAL  +++M     KP+ ITF+ ++ ACSH
Sbjct: 499 ARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSH 558

Query: 551 AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
           +GL E   +YFESM + YG++P  DHY  M+DLLGR+G+L +A   +  M  +P  TV  
Sbjct: 559 SGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLG 618

Query: 611 ALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRG 670
           A+L ACR+H ++ELGE+ A+ LF+L+P +   +V L+NMY++A  W+  ARVR  M+ +G
Sbjct: 619 AMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKG 678

Query: 671 IRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVE 730
           I+K PGCS VE  ++VH F S    HP    IY+ ++ +   +K AGYVPD N ++H+VE
Sbjct: 679 IQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAAGYVPDTN-SIHDVE 737

Query: 731 EEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILR 790
           E+ KE  L+ HSE+LA+AFGLL    G  I I KNLRVCGDCH A KYIS V  R II+R
Sbjct: 738 EDVKEQLLSSHSERLAIAFGLLNTRHGTAIHIRKNLRVCGDCHEATKYISLVTGREIIVR 797

Query: 791 DSNRFHHFKAGNCSCGDYW 809
           D  RFHHFK G CSCGDYW
Sbjct: 798 DLRRFHHFKNGICSCGDYW 816



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 142/455 (31%), Positives = 233/455 (51%), Gaps = 2/455 (0%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F    ++  YA   ++ +A K+F   P ++  +W++++ GY+  G    A ++  QMQ  
Sbjct: 178 FAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEA 237

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G +P   TL +VL   +    L+ G   HGYA +  F+    V T ++D Y KC  +  A
Sbjct: 238 GQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSA 297

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +FK     +N V+W TMI GY+QNG   +A   F  M  EGVE    +    L ACA 
Sbjct: 298 RLVFKGM-SSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACAN 356

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           +   + G  VH  +       +V V ++LI MY+KC  +D A  +    +    V+WN+M
Sbjct: 357 LGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAM 416

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I+G+A+ G   EAL+LF +M + DIK D FT  SV+   A       AK +H L ++T  
Sbjct: 417 ILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLM 476

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
           +   FV  ALID +AK G +  A  +F+LMQ++ VI+W ++I G   +G   EAL  F++
Sbjct: 477 DKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNE 536

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAKCG 486
           M+   + P+ +   S+++AC+   ++E G        ++ G   ++    ++V +  + G
Sbjct: 537 MQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAG 596

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKE 521
            ++DA +    M  +  IT    ++G  +  K  E
Sbjct: 597 RLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVE 631



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 182/338 (53%), Gaps = 5/338 (1%)

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           + S+ +  PS +      S ++   Q+   I+ +GF      Q+ LI ++ K   +  A 
Sbjct: 38  IPSHVYRHPSAILLELCTSLKEL-HQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAA 96

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK--IDDFTYPSVLNCFAS 348
           R+ E  E   +V +++M+ G+A+    ++A+  +++M   ++   + DFTY  +L     
Sbjct: 97  RVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTY--LLQLSGE 154

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
           N+DL   + +H +++  GF+   F   A++++YAK   ++ A+ +F  M  +D++SW ++
Sbjct: 155 NLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTV 214

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
           + G A +G    A++    M+ +G  PD + + S+L A A+L  L  G+ +H    ++G 
Sbjct: 215 VAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGF 274

Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
              ++V  +++  Y KCG +  A  VF  M +R+V++W  +I G AQNG+ +EA   + +
Sbjct: 275 EYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLK 334

Query: 529 MLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDK 566
           ML  G +P  ++ +G L AC++ G  E  R+    +D+
Sbjct: 335 MLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDE 372



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 164/336 (48%), Gaps = 14/336 (4%)

Query: 42  ALVDFSNSGEIDEAGQLFEKMSDR-----DGFTWNTMIAAYANSGRLREAKKLFNETPFK 96
           AL   +N G++ E G+   ++ D      D    N++I+ Y+   R+  A  +F     K
Sbjct: 350 ALHACANLGDL-ERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHK 408

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
              TW+++I GY+  G   EA  LF +MQ    +P  +TL +V+   +   + ++ +  H
Sbjct: 409 TVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIH 468

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
           G AI+T  D N FV T L+D +AKC  I  A  LF +  + ++ + W  MI GY  NG+G
Sbjct: 469 GLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQE-RHVITWNAMIDGYGTNGHG 527

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSA 275
            +A++ F +M+   V+ N+ TF S++ AC+     + G      +  + G E  +    A
Sbjct: 528 REALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGA 587

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR--DIK 333
           ++D+  + G LD A + ++   +   ++    ++G  R   HK  + L +K      D+ 
Sbjct: 588 MVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACR--IHKN-VELGEKTADELFDLD 644

Query: 334 IDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTGFE 368
            DD  Y  +L N +AS    +    V + + K G +
Sbjct: 645 PDDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQ 680


>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 293/764 (38%), Positives = 440/764 (57%), Gaps = 33/764 (4%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           FS  G I+EA ++FE + D+    ++TM+  YA +  L  A                   
Sbjct: 91  FSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETA------------------- 131

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                            +M+ +  +P  Y    +L++C     L+RG++ HG  I   F 
Sbjct: 132 ------------LAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFA 179

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            N F +TG+V+MYAKC+ I +A  +F   P+ ++ V+W T+I G+SQNG+  KA+E    
Sbjct: 180 ANVFAMTGVVNMYAKCRQIDDAYKMFDRMPE-RDLVSWNTIIAGFSQNGFAKKALELVLR 238

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M+ EG   +  T  ++L A A V     G  +HG  + +GF   V + +AL DMY+KCG 
Sbjct: 239 MQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGS 298

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           +++AR + +  +    VSWNSM+ G+ + G  ++A+++F+KM    I     T    L+ 
Sbjct: 299 VETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHA 358

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
            A   DL   K VH  + +        V N+LI MY+K   +D A  +FN +  +  +SW
Sbjct: 359 CADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSW 418

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
            ++I G A +G   EAL  FS+M+  G+ PD   + S++ A AEL+V    + +H + ++
Sbjct: 419 NAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIR 478

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
           S    ++ V  +LV +Y+KCG I+ A ++FD +  R VITW A+I G   +G G+ AL  
Sbjct: 479 SCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDL 538

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
           +D+M     +P+ IT++ ++ ACSH+GL +    +F+SM + YG++P  DHY  M+DLLG
Sbjct: 539 FDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLG 598

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ 645
           R+G++ EA   ++ M   P  TV+ A+L AC++H ++E+GE+AA  LFEL P     +V 
Sbjct: 599 RAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVL 658

Query: 646 LSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSK 705
           L+N+Y++  KW   A VRK M+ +G++K PGCS VE  ++VH F S    HP    IY+ 
Sbjct: 659 LANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAF 718

Query: 706 IDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKN 765
           ++E++  IK AGYVPD N  L +VE++ +E  L  HSEKLA+AFGLL    G  I + KN
Sbjct: 719 LEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKN 777

Query: 766 LRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           LRVCGDCH A KYIS V  R II+RD  RFHHFK G CSCGDYW
Sbjct: 778 LRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 82/337 (24%), Positives = 180/337 (53%), Gaps = 1/337 (0%)

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           + S+ +  P+ +      S ++   Q+   ++ +G       Q+ L+ +++K G ++ A 
Sbjct: 43  IPSHVYKHPAAVLLELCTSMKEL-HQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAA 101

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
           R+ E  +   +  +++M+ G+A+    + AL+   +M   D+K   + +  +L     N 
Sbjct: 102 RVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNA 161

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           DL   K +H  ++   F    F    +++MYAK   +D A+ +F+ M ++D++SW ++I 
Sbjct: 162 DLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIA 221

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
           G + +G  ++AL+    M+  G  PD + + ++L A A++ +L  G+ +H   +++G   
Sbjct: 222 GFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAK 281

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
            +++  +L  +Y+KCG +  A  +FD M  + V++W +++ G  QNG+ ++A+  +++ML
Sbjct: 282 LVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKML 341

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKV 567
             G  P  +T +  L AC+  G  E  ++  + +D++
Sbjct: 342 EEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQL 378



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 130/292 (44%), Gaps = 36/292 (12%)

Query: 23  ARYTHNVGNSVKPASD---LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
            ++ H   + +   SD   +N  +  +S    +D A  +F  ++ R   +WN MI  YA 
Sbjct: 368 GKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQ 427

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
           +GR+ EA   F+E                               M+  G +P  +T+ +V
Sbjct: 428 NGRVSEALNCFSE-------------------------------MKSLGMKPDSFTMVSV 456

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKN 199
           +   +   + +  +  HG  I++C D N FV T LVDMY+KC  I  A  LF M  D ++
Sbjct: 457 IPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISD-RH 515

Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG 259
            + W  MI GY  +G G  A++ F  M+   VE N  T+ S+++AC+     D G +   
Sbjct: 516 VITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFK 575

Query: 260 CILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            +    G E ++    A++D+  + G +  A   +E   I   ++    ++G
Sbjct: 576 SMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLG 627



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 96/233 (41%), Gaps = 41/233 (17%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF-- 95
           +  ALVD +S  G I  A +LF+ +SDR   TWN MI  Y   G  R A  LF++     
Sbjct: 487 VTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGA 546

Query: 96  --KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRG 152
              N  T+ S+I   S+ GL  E    F  M+ + G  PS   +D+   +  L G   R 
Sbjct: 547 VEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPS---MDHYGAMVDLLGRAGR- 602

Query: 153 EQFHGYAIKTCFDL--NAFVVTGLV---DMYAKCKC-----IFE--AEYLFKMFPD-GKN 199
                  IK  +D   N  +  G+     M   CK      + E  A+ LF++ PD G  
Sbjct: 603 -------IKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGY 655

Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
           HV    +   Y+      K  E  + M  +G++            C+ V  R+
Sbjct: 656 HVLLANI---YASTSKWSKVAEVRKTMEKKGLKKT--------PGCSVVELRN 697


>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
 gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
 gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
          Length = 922

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 295/796 (37%), Positives = 443/796 (55%), Gaps = 42/796 (5%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +  +G+I  A +LF+ M  RD  +WN+M+  Y +S ++ +A+ LF + P +N  +W+ +I
Sbjct: 137 YVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMI 196

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            GY       +A+++F +M  EG  P Q    + L      G L   E     A+KT F+
Sbjct: 197 SGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFE 256

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            +  + T ++++Y++   + +    F      +N   W+TMI   S  G    AI  +  
Sbjct: 257 RDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYER 316

Query: 226 MRVEGVESNQFTFPSILTACAAVS-ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
             V+ + + +    + L  C  +  AR    Q+         E  V   +ALI  Y + G
Sbjct: 317 DPVKSI-ACRTALITGLAQCGRIDDARILFEQIP--------EPIVVSWNALITGYMQNG 367

Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
            ++ A+ L +     N +SW  MI G+A+ G  +EAL L +++H   +     +  S+  
Sbjct: 368 MVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFF 427

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
             ++ + L     VHSL VK G +   F  NALI MY K  N++ A  VF+ M  KD++S
Sbjct: 428 ACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVS 487

Query: 405 W-------------------------------TSLITGCAYHGSYEEALKYFSDMRISGI 433
           W                               T++I+  A+     EA+  F  M     
Sbjct: 488 WNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHE 547

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
            P+  +++ +L  C  L   + GQQ+H V +K G  S L V N+L+ +Y KCGC  D+ R
Sbjct: 548 LPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCA-DSRR 606

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGL 553
           +FD M  RD+ TW  +I G AQ+G G+EA++ Y  M + G  P+ +TFVGLL ACSHAGL
Sbjct: 607 IFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGL 666

Query: 554 AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
            +    +F+SM + YG+ P P+HYACM+DLLGR+G +  A+  +  M  EPD  +W ALL
Sbjct: 667 VDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALL 726

Query: 614 SACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRK 673
            AC++H + E+G+RAA  LF +EP NA  YV LSN+YS+ G W + A VRK+MK +G+ K
Sbjct: 727 GACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIK 786

Query: 674 EPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEG 733
           EPGCSW +   ++H F++ D+ H    +I + ++E+  L+K  GYVPD  F LH+++EE 
Sbjct: 787 EPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQ 846

Query: 734 KEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSN 793
           KE  L YHSEKLAVA+ LL  P+G PI+I KNLR+CGDCHT +K++S V  R I +RD N
Sbjct: 847 KESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGN 906

Query: 794 RFHHFKAGNCSCGDYW 809
           RFHHF+ G+CSC D+W
Sbjct: 907 RFHHFRNGSCSCEDFW 922



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 173/662 (26%), Positives = 298/662 (45%), Gaps = 67/662 (10%)

Query: 45  DFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSL 104
           D    G + EA ++F+ M  RD   WN+MI+AY ++G    A+ L++     N  T + L
Sbjct: 43  DLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAIL 102

Query: 105 IYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKG--LLQRGEQFHGYAIKT 162
           + GY   G  +EA  +F     +G         N +  C ++   +      F     + 
Sbjct: 103 LSGYGRLGRVLEARRVF-----DGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRD 157

Query: 163 CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIEC 222
               N+ ++TG    Y     + +A  LF+  P+ +N V+WT MI+GY +     KA + 
Sbjct: 158 VSSWNS-MLTG----YCHSLQMVDARNLFEKMPE-RNLVSWTVMISGYGRIENHGKAWDI 211

Query: 223 FRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK 282
           F  M  EG+  +Q  F S L+A   +   D    +    L +GFE +V + +A++++Y++
Sbjct: 212 FCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSR 271

Query: 283 -CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPS 341
               LD+A +  E     NE +W++MI   +  G    A++++++   + I         
Sbjct: 272 DTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITG 331

Query: 342 VLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
           +  C    ID  +A+ +   I +     +    NALI  Y + G ++ A  +F+ M  ++
Sbjct: 332 LAQC--GRID--DARILFEQIPEPIVVSW----NALITGYMQNGMVNEAKELFDKMPFRN 383

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
            ISW  +I G A +G  EEAL    ++  SG+ P    ++SI  AC+ +  LE G QVH+
Sbjct: 384 TISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHS 443

Query: 462 VFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKE 521
           + +K G   +    N+L+ +Y KC  +  A +VF  M T+D+++W + +    QN    E
Sbjct: 444 LAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDE 503

Query: 522 ALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESM------------DKVYG 569
           A   +D ML+R    D +++  ++ A +HA  +  A   F++M              + G
Sbjct: 504 ARNTFDNMLSR----DDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLG 559

Query: 570 I-------KPGPDHYACMIDLLGRSGKLIEAKALLD--------------QMVGEPDATV 608
           +       K G   +   I  LG   +LI A AL+                ++ E D   
Sbjct: 560 VCGSLGASKIGQQIHTVAIK-LGMDSELIVANALISMYFKCGCADSRRIFDLMEERDIFT 618

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMP----YVQLSNMYSTAGKWEDAARVRK 664
           W  +++    HG   LG  A      +E    +P    +V L N  S AG  ++  +  K
Sbjct: 619 WNTIITGYAQHG---LGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFK 675

Query: 665 LM 666
            M
Sbjct: 676 SM 677



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 198/421 (47%), Gaps = 33/421 (7%)

Query: 31  NSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF 90
           + VK  +     +   +  G ID+A  LFE++ +    +WN +I  Y  +G + EAK+LF
Sbjct: 317 DPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELF 376

Query: 91  NETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQ 150
           ++ PF+N  +W+ +I GY+  G   EA  L  ++   G  PS  +L ++   CS    L+
Sbjct: 377 DKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALE 436

Query: 151 RGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK------------------ 192
            G Q H  A+K     N+F    L+ MY KC+ +  A  +F                   
Sbjct: 437 TGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALV 496

Query: 193 ---MFPDGKN---------HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
              +  + +N          V+WTT+I+ Y+      +A+  F+ M  E    N      
Sbjct: 497 QNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTI 556

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           +L  C ++ A   G Q+H   +  G ++ + V +ALI MY KCG  DS RR+ +  E  +
Sbjct: 557 LLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCADS-RRIFDLMEERD 615

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVH 359
             +WN++I G+A+ G  +EA+ +++ M +  +  ++ T+  +LN C  + +     K   
Sbjct: 616 IFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFK 675

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCA-FMVFNLMQDKDVISWTSLITGCAYHGSY 418
           S+    G          ++D+  + G++  A   ++++  + D + W++L+  C  H + 
Sbjct: 676 SMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNA 735

Query: 419 E 419
           E
Sbjct: 736 E 736


>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
          Length = 922

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 295/796 (37%), Positives = 443/796 (55%), Gaps = 42/796 (5%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +  +G+I  A +LF+ M  RD  +WN+M+  Y +S ++ +A+ LF + P +N  +W+ +I
Sbjct: 137 YVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMI 196

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            GY       +A+++F +M  EG  P Q    + L      G L   E     A+KT F+
Sbjct: 197 SGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFE 256

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            +  + T ++++Y++   + +    F      +N   W+TMI   S  G    AI  +  
Sbjct: 257 RDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYER 316

Query: 226 MRVEGVESNQFTFPSILTACAAVS-ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
             V+ + + +    + L  C  +  AR    Q+         E  V   +ALI  Y + G
Sbjct: 317 DPVKSI-ACRTALITGLAQCGRIDDARILFEQIP--------EPIVVSWNALITGYMQNG 367

Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
            ++ A+ L +     N +SW  MI G+A+ G  +EAL L +++H   +     +  S+  
Sbjct: 368 MVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFF 427

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
             ++ + L     VHSL VK G +   F  NALI MY K  N++ A  VF+ M  KD++S
Sbjct: 428 ACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVS 487

Query: 405 W-------------------------------TSLITGCAYHGSYEEALKYFSDMRISGI 433
           W                               T++I+  A+     EA+  F  M     
Sbjct: 488 WNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHE 547

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
            P+  +++ +L  C  L   + GQQ+H V +K G  S L V N+L+ +Y KCGC  D+ R
Sbjct: 548 LPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCA-DSRR 606

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGL 553
           +FD M  RD+ TW  +I G AQ+G G+EA++ Y  M + G  P+ +TFVGLL ACSHAGL
Sbjct: 607 IFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGL 666

Query: 554 AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
            +    +F+SM + YG+ P P+HYACM+DLLGR+G +  A+  +  M  EPD  +W ALL
Sbjct: 667 VDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALL 726

Query: 614 SACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRK 673
            AC++H + E+G+RAA  LF +EP NA  YV LSN+YS+ G W + A VRK+MK +G+ K
Sbjct: 727 GACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIK 786

Query: 674 EPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEG 733
           EPGCSW +   ++H F++ D+ H    +I + ++E+  L+K  GYVPD  F LH+++EE 
Sbjct: 787 EPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQ 846

Query: 734 KEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSN 793
           KE  L YHSEKLAVA+ LL  P+G PI+I KNLR+CGDCHT +K++S V  R I +RD N
Sbjct: 847 KESSLLYHSEKLAVAYCLLATPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGN 906

Query: 794 RFHHFKAGNCSCGDYW 809
           RFHHF+ G+CSC D+W
Sbjct: 907 RFHHFRNGSCSCEDFW 922



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 173/662 (26%), Positives = 298/662 (45%), Gaps = 67/662 (10%)

Query: 45  DFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSL 104
           D    G + EA ++F+ M  RD   WN+MI+AY ++G    A+ L++     N  T + L
Sbjct: 43  DLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAIL 102

Query: 105 IYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKG--LLQRGEQFHGYAIKT 162
           + GY   G  +EA  +F     +G         N +  C ++   +      F     + 
Sbjct: 103 LSGYGRLGRVLEARRVF-----DGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRD 157

Query: 163 CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIEC 222
               N+ ++TG    Y     + +A  LF+  P+ +N V+WT MI+GY +     KA + 
Sbjct: 158 VSSWNS-MLTG----YCHSLQMVDARNLFEKMPE-RNLVSWTVMISGYGRIENHGKAWDI 211

Query: 223 FRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK 282
           F  M  EG+  +Q  F S L+A   +   D    +    L +GFE +V + +A++++Y++
Sbjct: 212 FCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSR 271

Query: 283 -CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPS 341
               LD+A +  E     NE +W++MI   +  G    A++++++   + I         
Sbjct: 272 DTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITG 331

Query: 342 VLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
           +  C    ID  +A+ +   I +     +    NALI  Y + G ++ A  +F+ M  ++
Sbjct: 332 LAQC--GRID--DARILFEQIPEPIVVSW----NALITGYMQNGMVNEAKELFDKMPFRN 383

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
            ISW  +I G A +G  EEAL    ++  SG+ P    ++SI  AC+ +  LE G QVH+
Sbjct: 384 TISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHS 443

Query: 462 VFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKE 521
           + +K G   +    N+L+ +Y KC  +  A +VF  M T+D+++W + +    QN    E
Sbjct: 444 LAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDE 503

Query: 522 ALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESM------------DKVYG 569
           A   +D ML+R    D +++  ++ A +HA  +  A   F++M              + G
Sbjct: 504 ARNTFDNMLSR----DDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLG 559

Query: 570 I-------KPGPDHYACMIDLLGRSGKLIEAKALLD--------------QMVGEPDATV 608
           +       K G   +   I  LG   +LI A AL+                ++ E D   
Sbjct: 560 VCGSLGASKIGQQIHTVAIK-LGMDSELIVANALISMYFKCGCADSRRIFDLMEERDIFT 618

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMP----YVQLSNMYSTAGKWEDAARVRK 664
           W  +++    HG   LG  A      +E    +P    +V L N  S AG  ++  +  K
Sbjct: 619 WNTIITGYAQHG---LGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFK 675

Query: 665 LM 666
            M
Sbjct: 676 SM 677



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 198/421 (47%), Gaps = 33/421 (7%)

Query: 31  NSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF 90
           + VK  +     +   +  G ID+A  LFE++ +    +WN +I  Y  +G + EAK+LF
Sbjct: 317 DPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELF 376

Query: 91  NETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQ 150
           ++ PF+N  +W+ +I GY+  G   EA  L  ++   G  PS  +L ++   CS    L+
Sbjct: 377 DKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALE 436

Query: 151 RGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK------------------ 192
            G Q H  A+K     N+F    L+ MY KC+ +  A  +F                   
Sbjct: 437 TGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALV 496

Query: 193 ---MFPDGKN---------HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
              +  + +N          V+WTT+I+ Y+      +A+  F+ M  E    N      
Sbjct: 497 QNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTI 556

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           +L  C ++ A   G Q+H   +  G ++ + V +ALI MY KCG  DS RR+ +  E  +
Sbjct: 557 LLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCADS-RRIFDLMEERD 615

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVH 359
             +WN++I G+A+ G  +EA+ +++ M +  +  ++ T+  +LN C  + +     K   
Sbjct: 616 IFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFK 675

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCA-FMVFNLMQDKDVISWTSLITGCAYHGSY 418
           S+    G          ++D+  + G++  A   ++++  + D + W++L+  C  H + 
Sbjct: 676 SMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNA 735

Query: 419 E 419
           E
Sbjct: 736 E 736


>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
 gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
          Length = 743

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 276/675 (40%), Positives = 416/675 (61%), Gaps = 33/675 (4%)

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
           N+F    ++  Y+K   +   + +F + P+ ++ V+W ++I+GY   G   +A++ +  M
Sbjct: 70  NSFSWNTMLSAYSKSGDLSTMQEIFSIMPN-RDGVSWNSLISGYVCYGSVVEAVKTYNSM 128

Query: 227 RVEGVES-NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
             +GV + N+ TF ++L   ++    D G Q+HG I+  GF A V+V S+L+DMYAK G 
Sbjct: 129 MKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGL 188

Query: 286 LDSA-------------------------------RRLLEYSEIDNEVSWNSMIVGFARQ 314
           +  A                               +RL    +  + +SW +MI G  + 
Sbjct: 189 VSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQN 248

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
           G   EA+ LF+ M    + +D +T+ SVL        L   K +H+LI+++G+    FV 
Sbjct: 249 GLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVG 308

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           +AL+DMY K  ++  A  VF  M +K+V+SWT+++ G   +G  EEA++ F DM+ +GI 
Sbjct: 309 SALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIE 368

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           PD   + S++S+CA L  LE G Q H   L SG  S ++V N+L+ +Y KCG I D+N++
Sbjct: 369 PDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQL 428

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
           FD M  RD ++WTAL+ G AQ GK  E +  +++ML +G KPD +TF+ +L ACS AGL 
Sbjct: 429 FDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLV 488

Query: 555 ENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
           E  + YFESM K +GI P  DHY CMIDL GR+G+L EAK  +++M   PD+  W  LLS
Sbjct: 489 ERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLS 548

Query: 615 ACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
           +CR++G+ E+G+ AA +L EL+P N   Y+ LS++Y+  GKW + A++R+ M+ +G RKE
Sbjct: 549 SCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKE 608

Query: 675 PGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGK 734
           PG SW++  S+V+IF ++D+  P    IY++++++   + E GYVPD +  LH+VE+  K
Sbjct: 609 PGFSWIKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEEGYVPDASSVLHDVEDSEK 668

Query: 735 EIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNR 794
              L +HSEKLA+AFGLL +P G PIR+ KNLRVCGDCH A KYIS +  R I++RD+ R
Sbjct: 669 MKMLNHHSEKLAIAFGLLFIPHGLPIRVVKNLRVCGDCHNATKYISKISQREILVRDAVR 728

Query: 795 FHHFKAGNCSCGDYW 809
           FH FK G CSCGD+W
Sbjct: 729 FHLFKDGTCSCGDFW 743



 Score =  286 bits (731), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 172/513 (33%), Positives = 270/513 (52%), Gaps = 34/513 (6%)

Query: 35  PASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNET 93
           P + L   L++ +S  G I  A  +F+KM   + F+WNTM++AY+ SG L   +++F+  
Sbjct: 38  PETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYSKSGDLSTMQEIFSIM 97

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVLRLCSLKGLLQRG 152
           P ++  +W+SLI GY  YG  +EA + +  M  +G    ++ T   +L L S +G +  G
Sbjct: 98  PNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGCVDLG 157

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK-------------------- 192
            Q HG  +K  F    FV + LVDMYAK   +  A  +F                     
Sbjct: 158 RQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRS 217

Query: 193 -MFPDGK---------NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            M  D K         + ++WTTMITG  QNG   +A++ FRDMR EG+  +Q+TF S+L
Sbjct: 218 GMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVL 277

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           TAC  + A   G ++H  I+ SG+  NV+V SAL+DMY KC  +  A  + +     N V
Sbjct: 278 TACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVV 337

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SW +M+VG+ + GF +EA+ +F  M    I+ DDFT  SV++  A+   L      H   
Sbjct: 338 SWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQA 397

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           + +G   +  V+NALI +Y K G+++ +  +F+ M  +D +SWT+L++G A  G   E +
Sbjct: 398 LVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETI 457

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LVLV 481
             F  M + G+ PD V   ++LSAC+   ++E GQQ     LK  G    S   + ++ +
Sbjct: 458 DLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDL 517

Query: 482 YAKCGCINDANRVFDSM-HTRDVITWTALIMGC 513
           + + G + +A    + M  + D I W  L+  C
Sbjct: 518 FGRAGRLEEAKNFINKMPFSPDSIGWATLLSSC 550



 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 124/381 (32%), Positives = 218/381 (57%), Gaps = 4/381 (1%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           +LVD ++  G +  A Q+F+++ +R+   +NTMI     SG ++++K+LF+    ++  +
Sbjct: 178 SLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSIS 237

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
           W+++I G    GL+ EA +LF  M+ EG    QYT  +VL  C     L+ G++ H   I
Sbjct: 238 WTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLII 297

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAI 220
           ++ ++ N FV + LVDMY KC+ +  AE +FK   + KN V+WT M+ GY QNG+  +A+
Sbjct: 298 RSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMAN-KNVVSWTAMLVGYGQNGFSEEAV 356

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
             F DM+  G+E + FT  S++++CA +++ + GAQ H   L SG  + + V +ALI +Y
Sbjct: 357 RVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLY 416

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
            KCG ++ + +L +     +EVSW +++ G+A+ G   E + LF++M  + +K D  T+ 
Sbjct: 417 GKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFI 476

Query: 341 SVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ- 398
           +VL+ C  + +     +   S++   G   +      +ID++ + G L+ A    N M  
Sbjct: 477 AVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPF 536

Query: 399 DKDVISWTSLITGCAYHGSYE 419
             D I W +L++ C  +G+ E
Sbjct: 537 SPDSIGWATLLSSCRLYGNEE 557



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 128/517 (24%), Positives = 233/517 (45%), Gaps = 106/517 (20%)

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C     +    ++H  I+ S      ++ + LI+ Y+K G++  AR + +     N  SW
Sbjct: 15  CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARD--------------------------------I 332
           N+M+  +++ G       +F  M  RD                                +
Sbjct: 75  NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134

Query: 333 KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM 392
            ++  T+ ++L   +S   ++  + +H  IVK GF  Y FV ++L+DMYAK G +  A  
Sbjct: 135 NLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQ 194

Query: 393 VFNLMQDKDV-------------------------------ISWTSLITGCAYHGSYEEA 421
           VF+ +Q+++V                               ISWT++ITG   +G   EA
Sbjct: 195 VFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEA 254

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           +  F DMR  G+  D     S+L+AC  L  L+ G+++H + ++SG   ++ V ++LV +
Sbjct: 255 MDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDM 314

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           Y KC  +  A  VF  M  ++V++WTA+++G  QNG  +EA++ +  M   G +PD  T 
Sbjct: 315 YCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTL 374

Query: 542 VGLLFACSH-AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
             ++ +C++ A L E A+++ +++  V G+         +I L G+ G + ++  L D+M
Sbjct: 375 GSVISSCANLASLEEGAQFHCQAL--VSGLISFITVSNALITLYGKCGSIEDSNQLFDEM 432

Query: 601 VG----------------------------------EPDATVWKALLSACRVHGDLELGE 626
                                               +PDA  + A+LSAC   G +E G+
Sbjct: 433 SFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQ 492

Query: 627 RAANNLFELEPMNAMP----YVQLSNMYSTAGKWEDA 659
           +   ++  L+    +P    Y  + +++  AG+ E+A
Sbjct: 493 QYFESM--LKDHGIIPFSDHYTCMIDLFGRAGRLEEA 527


>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 296/798 (37%), Positives = 463/798 (58%), Gaps = 49/798 (6%)

Query: 33  VKPASDLN-----RALVDFSNSGEIDEAGQLFEKM----SDRDGFTWNTMIAAYANSGRL 83
            KPASD+N       + D  +S        +  +M     + D +    ++  YA SG L
Sbjct: 63  TKPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCL 122

Query: 84  RE---AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVL 140
            +   A+KLF E P +N   W+++I  Y+     +EA+ +F +M   G  P  +T  + L
Sbjct: 123 DDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASAL 182

Query: 141 RLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD--GK 198
           R+C        G+Q H   I   F  + FV   L+DMYAKC    + E   K+F +   +
Sbjct: 183 RVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCD---DEESCLKVFDEMGER 239

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRV--EGVESNQFTFPSILTACAAVSARDFGAQ 256
           N V W ++I+  +Q G+   A+  F  M+   +G++ +QFTF ++LT CA     + G Q
Sbjct: 240 NQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQ 299

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           +H  ++ +    N+ V++ L+ MY++CG L+ A+ +       N  SWNSMI G+ + G 
Sbjct: 300 IHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGE 359

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
            +EAL LFK+M    IK D F+  S+L+   S  D    + +H+ IV+   E    +   
Sbjct: 360 TQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVV 419

Query: 377 LIDMYAKQGNLDCAFMVFN--LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           L+DMYAK G++D A+ V++  + +D++   W S++ G A  G  +E+  +F +M  S I 
Sbjct: 420 LVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIE 479

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
            D + + +I++    L VLE                      +LV +Y+KCG I  A  V
Sbjct: 480 YDVLTMVTIVN----LLVLE---------------------TALVDMYSKCGAITKARTV 514

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
           FD+M+ +++++W A+I G +++G  KEAL  Y++M  +G  P+ +TF+ +L ACSH GL 
Sbjct: 515 FDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLV 574

Query: 555 ENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
           E     F SM + Y I+   +HY CM+DLLGR+G+L +AK  +++M  EP+ + W ALL 
Sbjct: 575 EEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLG 634

Query: 615 ACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
           ACRVH D+++G  AA  LFEL+P N  PYV +SN+Y+ AG+W++   +R++MK +G++K+
Sbjct: 635 ACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKD 694

Query: 675 PGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGK 734
           PG SW+E NS++ IF +  + HP   +IY+ +  + L  K  GY+PD +F L NV++  +
Sbjct: 695 PGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKE 754

Query: 735 EIGLAY---HSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRD 791
           E    Y   HSE+LA++ GL++LP+ + IR+FKNLR+CGDCHTA K+IS +  R II RD
Sbjct: 755 EEEEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARD 814

Query: 792 SNRFHHFKAGNCSCGDYW 809
           +NRFHHF+ G CSCGDYW
Sbjct: 815 TNRFHHFENGKCSCGDYW 832


>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 830

 Score =  553 bits (1424), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 280/741 (37%), Positives = 436/741 (58%), Gaps = 7/741 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
            +++  Y N   + + +K+F     +N  TW+SL+ GY   G+ ++   LF++M+ EG  
Sbjct: 95  TSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVW 154

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+ +T  +VL + + +G++  G+  H  +IK       FV   L++MYAKC  + EA  +
Sbjct: 155 PNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVV 214

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F    + ++ V+W T++ G   NG   +A++ F D R       + T+ +++  CA +  
Sbjct: 215 FCRM-ETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKH 273

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL-LEYSEIDNEVSWNSMIV 309
                Q+H  +L  GF +   V +AL+D Y K G LD A  + L  S   N VSW +MI 
Sbjct: 274 LGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMID 333

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           G  + G    A +LF +M    +  +D TY ++L    ++        +H+ ++KT +E 
Sbjct: 334 GCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILTVSEASF----PPQIHAQVIKTNYEC 389

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
              V  AL+  Y+K  + + A  +F ++  KDV+SW++++T  A  G    A   F  M 
Sbjct: 390 TPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMT 449

Query: 430 ISGICPDHVVVSSILSACAELTV-LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
           + G+ P+   +SS + ACA     ++ G+Q HA+ +K     +L V ++LV +YA+ G I
Sbjct: 450 MHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSI 509

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
            +A  VF+    RD+++W +++ G AQ+G  ++AL  + QM   G   D +TF+ ++  C
Sbjct: 510 ENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGC 569

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           +HAGL E  + YF+ M + YGI P  DHYACM+DL  R+GKL E  +L++ M      T+
Sbjct: 570 AHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTI 629

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           W+ALL ACRVH ++ELG+ AA  L  LEP+++  YV LSN+YS AGKW++   VRKLM +
Sbjct: 630 WRALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDT 689

Query: 669 RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHN 728
           + +RKE GCSW++  ++VH FI+ D+ HPL   IY+K+  +   +K+ GY PD +F  H+
Sbjct: 690 KKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRAMTAKLKQEGYCPDTSFVPHD 749

Query: 729 VEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHII 788
           V E+ KE  LA HSE+LA+AFGL+  P  AP+ IFKNLRV GD HT MK +S +  R I+
Sbjct: 750 VAEDQKEAMLAMHSERLALAFGLIATPPAAPLHIFKNLRVSGDGHTVMKMVSEIEDREIV 809

Query: 789 LRDSNRFHHFKAGNCSCGDYW 809
           +RD  RFHHFK+G CSCGD+W
Sbjct: 810 MRDCCRFHHFKSGVCSCGDFW 830



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 229/452 (50%), Gaps = 13/452 (2%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N+++  YA  G + EA+ +F     ++  +W++L+ G    G D+EA +LF   +  
Sbjct: 193 FVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSS 252

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
               ++ T   V+ LC+    L    Q H   +K  F     V+T L+D Y K   + +A
Sbjct: 253 ITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKA 312

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F +    +N V+WT MI G  QNG    A   F  MR +GV  N  T+ +ILT    
Sbjct: 313 LDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILT---- 368

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           VS   F  Q+H  ++ + +E    V +AL+  Y+K    + A  + +  +  + VSW++M
Sbjct: 369 VSEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAM 428

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS---NIDLNNAKSVHSLIVK 364
           +  +A+ G    A + F KM    +K ++FT  S ++  AS    +DL   +  H++ +K
Sbjct: 429 LTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDL--GRQFHAISIK 486

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
                   V++AL+ MYA++G+++ A  VF    D+D++SW S+++G A HG  ++AL  
Sbjct: 487 HRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDV 546

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLVLVY 482
           F  M + GI  D +   S++  CA   ++E GQQ   + ++  G +  ++D+   +V +Y
Sbjct: 547 FRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITP-TMDHYACMVDLY 605

Query: 483 AKCGCINDANRVFDSMH-TRDVITWTALIMGC 513
           ++ G +++   + + M        W AL+  C
Sbjct: 606 SRAGKLDETMSLIEGMPFPAGPTIWRALLGAC 637



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 122/422 (28%), Positives = 206/422 (48%), Gaps = 13/422 (3%)

Query: 205 TMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS 263
           TM    +  G+  +A++ F D  R +G          I+  C +V  R  G Q+H   + 
Sbjct: 24  TMPFSTTWQGFVHQALDHFLDAHRRQGRCVGGGALLGIIKICGSVPDRVLGKQLHALCVR 83

Query: 264 SGFE-ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
            G +  ++ V ++L+DMY     +   R++ E     N V+W S++ G+ + G   + +S
Sbjct: 84  CGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMS 143

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYA 382
           LF +M A  +  + FT+ SVL+  AS   ++  + VH+  +K G     FV N+L++MYA
Sbjct: 144 LFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYA 203

Query: 383 KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
           K G ++ A +VF  M+ +D++SW +L+ G   +G   EAL+ F D R S         S+
Sbjct: 204 KCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYST 263

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH-TR 501
           +++ CA L  L   +Q+H+  LK G  S  +V  +L+  Y K G ++ A  VF  M  ++
Sbjct: 264 VINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQ 323

Query: 502 DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYF 561
           +V++WTA+I GC QNG    A   + +M   G  P+ +T+  +L   S A        + 
Sbjct: 324 NVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTIL-TVSEASFPPQI--HA 380

Query: 562 ESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLD--QMVGEPDATVWKALLSACRVH 619
           + +   Y   P          L+    KL   +  L   +M+ + D   W A+L+     
Sbjct: 381 QVIKTNYECTP-----TVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQA 435

Query: 620 GD 621
           GD
Sbjct: 436 GD 437



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 159/317 (50%), Gaps = 9/317 (2%)

Query: 314 QGFHKEALSLFKKMHARDIK-IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE-GYK 371
           QGF  +AL  F   H R  + +       ++    S  D    K +H+L V+ G + G  
Sbjct: 32  QGFVHQALDHFLDAHRRQGRCVGGGALLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDI 91

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
            V  +L+DMY    ++     VF  M  ++V++WTSL+TG    G   + +  F  MR  
Sbjct: 92  RVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAE 151

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
           G+ P+    SS+LS  A   +++ GQ VHA  +K G CS++ V NSL+ +YAKCG + +A
Sbjct: 152 GVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEA 211

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ-FYDQM--LARGTKPDYITFVGLLFAC 548
             VF  M TRD+++W  L+ G   NG+  EALQ F+D    +   T+  Y T + L    
Sbjct: 212 RVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANL 271

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
            H GL   AR    S+ K +G     +    ++D   ++G+L +A  +   M G  +   
Sbjct: 272 KHLGL---ARQLHSSVLK-HGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVS 327

Query: 609 WKALLSACRVHGDLELG 625
           W A++  C  +GD+ L 
Sbjct: 328 WTAMIDGCIQNGDIPLA 344



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 75/175 (42%), Gaps = 41/175 (23%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           ++ ALV  ++  G I+ A  +FE+ +DRD  +WN+M++ YA                   
Sbjct: 495 VSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQ------------------ 536

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF-- 155
                   +GYS   LD+     F QM++EG      T  +V+  C+  GL++ G+Q+  
Sbjct: 537 --------HGYSQKALDV-----FRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFD 583

Query: 156 ---HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
                Y I    D  A     +VD+Y++   + E   L +  P       W  ++
Sbjct: 584 LMVRDYGITPTMDHYAC----MVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALL 634


>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  553 bits (1424), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 292/764 (38%), Positives = 438/764 (57%), Gaps = 33/764 (4%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           FS  G I+EA ++FE + D+    ++TM+  YA +  L  A                   
Sbjct: 91  FSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETA------------------- 131

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                            +M+ +  +P  Y    +L++C     L+RG++ HG  I   F 
Sbjct: 132 ------------LAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFA 179

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            N F +TG+V+MYAKC+ I +A  +F   P+ ++ V+W T+I G+SQNG+  KA+E    
Sbjct: 180 ANVFAMTGVVNMYAKCRQIDDAYKMFDRMPE-RDLVSWNTIIAGFSQNGFAKKALELVLR 238

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M+ EG   +  T  ++L A A V     G  +HG  + +GF   V + +AL DMY+KCG 
Sbjct: 239 MQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGS 298

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           +++AR + +  +    VSWNSM+ G+ + G  ++A+++F+KM    I     T    L+ 
Sbjct: 299 VETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHA 358

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
            A   DL   K VH  + +        V N+LI MY+K   +D A  +FN +  +  +SW
Sbjct: 359 CADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSW 418

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
            ++I G A +G   EAL  FS+M+  G+ PD   + S++ A AEL+V    + +H + ++
Sbjct: 419 NAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIR 478

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
           S    ++ V  +LV +Y+KCG I+ A ++FD +  R VITW A+I G   +G G+ AL  
Sbjct: 479 SCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDL 538

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
           +D+M     +P+ IT++ ++ ACSH+GL +    +F+SM + YG++P  DHY  M+DLLG
Sbjct: 539 FDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLG 598

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ 645
           R+G++ EA   ++ M   P  TV+ A   AC++H ++E+GE+AA  LFEL P     +V 
Sbjct: 599 RAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVL 658

Query: 646 LSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSK 705
           L+N+Y++  KW   A VRK M+ +G++K PGCS VE  ++VH F S    HP    IY+ 
Sbjct: 659 LANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAF 718

Query: 706 IDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKN 765
           ++E++  IK AGYVPD N  L +VE++ +E  L  HSEKLA+AFGLL    G  I + KN
Sbjct: 719 LEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKN 777

Query: 766 LRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           LRVCGDCH A KYIS V  R II+RD  RFHHFK G CSCGDYW
Sbjct: 778 LRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 82/337 (24%), Positives = 180/337 (53%), Gaps = 1/337 (0%)

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           + S+ +  P+ +      S ++   Q+   ++ +G       Q+ L+ +++K G ++ A 
Sbjct: 43  IPSHVYKHPAAVLLELCTSMKEL-HQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAA 101

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
           R+ E  +   +  +++M+ G+A+    + AL+   +M   D+K   + +  +L     N 
Sbjct: 102 RVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNA 161

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           DL   K +H  ++   F    F    +++MYAK   +D A+ +F+ M ++D++SW ++I 
Sbjct: 162 DLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIA 221

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
           G + +G  ++AL+    M+  G  PD + + ++L A A++ +L  G+ +H   +++G   
Sbjct: 222 GFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAK 281

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
            +++  +L  +Y+KCG +  A  +FD M  + V++W +++ G  QNG+ ++A+  +++ML
Sbjct: 282 LVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKML 341

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKV 567
             G  P  +T +  L AC+  G  E  ++  + +D++
Sbjct: 342 EEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQL 378



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 127/285 (44%), Gaps = 36/285 (12%)

Query: 23  ARYTHNVGNSVKPASD---LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
            ++ H   + +   SD   +N  +  +S    +D A  +F  ++ R   +WN MI  YA 
Sbjct: 368 GKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQ 427

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
           +GR+ EA   F+E                               M+  G +P  +T+ +V
Sbjct: 428 NGRVSEALNCFSE-------------------------------MKSLGMKPDSFTMVSV 456

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKN 199
           +   +   + +  +  HG  I++C D N FV T LVDMY+KC  I  A  LF M  D ++
Sbjct: 457 IPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISD-RH 515

Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG 259
            + W  MI GY  +G G  A++ F  M+   VE N  T+ S+++AC+     D G +   
Sbjct: 516 VITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFK 575

Query: 260 CILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
            +    G E ++    A++D+  + G +  A   +E   I   ++
Sbjct: 576 SMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGIT 620


>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 1135

 Score =  553 bits (1424), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 295/767 (38%), Positives = 444/767 (57%), Gaps = 30/767 (3%)

Query: 71   NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
            N+++  Y   G L  A+++F++ P ++  +W+S+I     +     +  LF  M  E   
Sbjct: 371  NSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVD 430

Query: 131  PSQYTLDNVLRLCS-LKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
            P+ +TL +V   CS ++G ++ G+Q H Y ++   DL  +    LV MYA+   + +A+ 
Sbjct: 431  PTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNNALVTMYARLGRVNDAKA 489

Query: 190  LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
            LF +F DGK+ V+W T+I+  SQN    +A+     M V+GV  +  T  S+L AC+ + 
Sbjct: 490  LFGVF-DGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLE 548

Query: 250  ARDFGAQVHGCILSSG-FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
                G ++H   L +G    N +V +AL+DMY  C      R + +         WN+++
Sbjct: 549  RLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALL 608

Query: 309  VGFARQGFHKEALSLFKKMHAR-DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
             G+AR  F  +AL LF +M +  +   +  T+ SVL         ++ + +H  IVK GF
Sbjct: 609  AGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGF 668

Query: 368  EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
               K+V NAL+DMY++ G ++ +  +F  M  +D++SW ++ITGC   G Y++AL    +
Sbjct: 669  GKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHE 728

Query: 428  M-RISG-----------------ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
            M R  G                   P+ V + ++L  CA L  L  G+++HA  +K    
Sbjct: 729  MQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLA 788

Query: 470  SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
              ++V ++LV +YAKCGC+N A+RVFD M  R+VITW  LIM    +GKG+EAL+ +  M
Sbjct: 789  MDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIM 848

Query: 530  LARG------TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDL 583
             A G       +P+ +T++ +  ACSH+G+ +     F +M   +G++P  DHYAC++DL
Sbjct: 849  TAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDL 908

Query: 584  LGRSGKLIEAKALLDQMVGEPDAT-VWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
            LGRSG++ EA  L++ M    +    W +LL ACR+H  +E GE AA +LF LEP  A  
Sbjct: 909  LGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASH 968

Query: 643  YVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDI 702
            YV +SN+YS+AG W+ A  VRK MK  G+RKEPGCSW+E   +VH F+S D  HP   ++
Sbjct: 969  YVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKEL 1028

Query: 703  YSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRI 762
            +  ++ +   +++ GYVPD++  LHNV++E KE  L  HSE+LA+AFGLL  P G  IR+
Sbjct: 1029 HEYLETLSQRMRKEGYVPDISCVLHNVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRV 1088

Query: 763  FKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             KNLRVC DCH A K IS +  R IILRD  RFHHF  G CSCGDYW
Sbjct: 1089 AKNLRVCNDCHVATKIISKIVDREIILRDVRRFHHFANGTCSCGDYW 1135



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 146/483 (30%), Positives = 228/483 (47%), Gaps = 38/483 (7%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D   +T N ++  YA  GR+ +AK LF     K+  +W+++I   S      EA    + 
Sbjct: 465 DLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYL 524

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDL--NAFVVTGLVDMYAKC 181
           M ++G RP   TL +VL  CS    L+ G + H YA++   DL  N+FV T LVDMY  C
Sbjct: 525 MIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNG-DLIENSFVGTALVDMYCNC 583

Query: 182 KCIFEAEYLFKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFT 237
           K   +   +F    DG   +    W  ++ GY++N +  +A+  F +M  E     N  T
Sbjct: 584 KQPKKGRLVF----DGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATT 639

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           F S+L AC           +HG I+  GF  + YVQ+AL+DMY++ G ++ ++ +     
Sbjct: 640 FASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMN 699

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD------------------IKIDDFTY 339
             + VSWN+MI G    G + +AL+L  +M  R                    K +  T 
Sbjct: 700 KRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTL 759

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
            +VL   A+   L   K +H+  VK        V +AL+DMYAK G L+ A  VF+ M  
Sbjct: 760 MTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPI 819

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISG------ICPDHVVVSSILSACAELTVL 453
           ++VI+W  LI     HG  EEAL+ F  M   G      I P+ V   +I +AC+   ++
Sbjct: 820 RNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMV 879

Query: 454 EFGQQVHAVFLKSGGCSSLSVDNS-LVLVYAKCGCINDANRVFDSMHT--RDVITWTALI 510
           + G  +      S G        + LV +  + G + +A  + ++M +    V  W++L+
Sbjct: 880 DEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLL 939

Query: 511 MGC 513
             C
Sbjct: 940 GAC 942



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 130/445 (29%), Positives = 223/445 (50%), Gaps = 23/445 (5%)

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
           W  ++   + +     AI  +  M       + F FP++L A AAV     G Q+H  + 
Sbjct: 298 WIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAHVF 357

Query: 263 SSGF--EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEA 320
             G    ++V V ++L++MY KCGDL +AR++ +     + VSWNSMI    R    + +
Sbjct: 358 KFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELS 417

Query: 321 LSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALID 379
           L LF+ M + ++    FT  SV + C      +   K VH+  ++ G +   + NNAL+ 
Sbjct: 418 LHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNNALVT 476

Query: 380 MYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVV 439
           MYA+ G ++ A  +F +   KD++SW ++I+  + +  +EEAL Y   M + G+ PD V 
Sbjct: 477 MYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVT 536

Query: 440 VSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS-VDNSLVLVYAKCGCINDANRVFDSM 498
           ++S+L AC++L  L  G+++H   L++G     S V  +LV +Y  C        VFD +
Sbjct: 537 LASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGV 596

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT-KPDYITFVGLLFACSHAGLAENA 557
             R V  W AL+ G A+N    +AL+ + +M++     P+  TF  +L AC    +    
Sbjct: 597 VRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKV---- 652

Query: 558 RWYFESMDKVYG--IKP--GPDHYA--CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKA 611
              F   + ++G  +K   G D Y    ++D+  R G++  +K +  +M  + D   W  
Sbjct: 653 ---FSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRM-NKRDIVSWNT 708

Query: 612 LLSACRVHGDLELGERAANNLFELE 636
           +++ C V G     + A N L E++
Sbjct: 709 MITGCIVCGRY---DDALNLLHEMQ 730



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 24/280 (8%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           +  AL+D +S  G ++ +  +F +M+ RD  +WNTMI      GR  +A  L +E   + 
Sbjct: 674 VQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQ 733

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
               S     Y + G                ++P+  TL  VL  C+    L +G++ H 
Sbjct: 734 GEDGSDTFVDYEDDG-------------GVPFKPNSVTLMTVLPGCAALAALGKGKEIHA 780

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
           YA+K    ++  V + LVDMYAKC C+  A  +F   P  +N + W  +I  Y  +G G 
Sbjct: 781 YAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPI-RNVITWNVLIMAYGMHGKGE 839

Query: 218 KAIECFRDMRVEG------VESNQFTFPSILTACAAVSARDFGAQV-HGCILSSGFEANV 270
           +A+E FR M   G      +  N+ T+ +I  AC+     D G  + H    S G E   
Sbjct: 840 EALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRG 899

Query: 271 YVQSALIDMYAKCGDLDSARRLLEY--SEIDNEVSWNSMI 308
              + L+D+  + G +  A  L+    S ++   +W+S++
Sbjct: 900 DHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLL 939



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 94/234 (40%), Gaps = 28/234 (11%)

Query: 20  IGPARYTHNVGNSVKPASDL--NRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAA 76
           +G  +  H      K A D+    ALVD ++  G ++ A ++F++M  R+  TWN +I A
Sbjct: 772 LGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMA 831

Query: 77  YANSGRLREAKKLF----------NETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL 126
           Y   G+  EA +LF           E    N  T+ ++    S+ G+  E   LF  M+ 
Sbjct: 832 YGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKA 891

Query: 127 -EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC-- 183
             G  P     D+   L  L G  + G     Y +      N   V     +   C+   
Sbjct: 892 SHGVEPRG---DHYACLVDLLG--RSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQ 946

Query: 184 -----IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
                   A++LF + P+  +H  +  M   YS  G   +A+   + M+  GV 
Sbjct: 947 SVEFGEIAAKHLFVLEPNVASH--YVLMSNIYSSAGLWDQALGVRKKMKEMGVR 998


>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 886

 Score =  553 bits (1424), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 312/862 (36%), Positives = 485/862 (56%), Gaps = 81/862 (9%)

Query: 16  RSKIIGPARYTHNVGNSVKPASDL---NRALVDFSNSGEIDEAGQLF-EKMSDRDGFTWN 71
           RS + G AR  H+   +V  AS +   N  L  + + G + +A  L  +++++ +  T N
Sbjct: 38  RSALTG-ARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPNVITHN 96

Query: 72  TMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG-YR 130
            M+  YA  G L +A +LF   P ++  +W++++ GY   G  + A ++F  M+  G   
Sbjct: 97  IMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSL 156

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM------------- 177
           P+ +T   V++ C   G  +   Q  G   K     +  V T LVDM             
Sbjct: 157 PNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQ 216

Query: 178 ------------------YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
                             YAK   +  A  +FK  P+ ++ V+W  +I+  S++G   +A
Sbjct: 217 FSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPE-RDVVSWNMVISALSKSGRVREA 275

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           ++   DM  +GV  +  T+ S LTACA +S+ ++G Q+H  ++ +    + YV SA++++
Sbjct: 276 LDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVEL 335

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           YAKCG    A+R+       N VSW  +I GF + G   E++ LF +M A  + +D F  
Sbjct: 336 YAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFAL 395

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
            ++++   + +D+     +HSL +K+G      V+N+LI MYAK GNL  A ++FN M +
Sbjct: 396 ATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAE 455

Query: 400 KDVISWTSLITG-----------------------------CAY--HGSYEEALKYFSDM 428
           +D++SWT +IT                               AY  HG+ E+ LK +SDM
Sbjct: 456 RDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDM 515

Query: 429 RIS-GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
                + PD V   ++   CA++   + G Q+    +K G     SV N+++ +Y+KCG 
Sbjct: 516 LTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGR 575

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           I++A + FD +  +D+++W A+I G +Q+G GK+A++ +D +L +G KPDYI++V +L  
Sbjct: 576 ISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSG 635

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
           CSH+GL E  ++YF+ M + + I PG +H++CM+DLLGR+G LIEAK L+D+M  +P A 
Sbjct: 636 CSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAE 695

Query: 608 VWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
           VW ALLSAC+ HG+ +L E AA +LF+L+   +  Y+ L+ MY+ AGK +D+A+VRKLM+
Sbjct: 696 VWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMR 755

Query: 668 SRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALH 727
            +GI+K PG SW+E N++VH+F +ED  HP    I  K+DE+M  I   GYV        
Sbjct: 756 DKGIKKSPGYSWMEVNNRVHVFKAEDVSHPQVIAIREKLDELMEKIAHLGYV-------- 807

Query: 728 NVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHI 787
             E    EI   +HSEKLAVAFG+++LP   PI I KNLR+C DCHT +K IS V  R  
Sbjct: 808 RTESPRSEI---HHSEKLAVAFGIMSLPAWMPIHIMKNLRICDDCHTVIKLISTVTDREF 864

Query: 788 ILRDSNRFHHFKAGNCSCGDYW 809
           ++RD  RFHHFK G+CSC DYW
Sbjct: 865 VIRDGVRFHHFKGGSCSCMDYW 886



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 156/642 (24%), Positives = 266/642 (41%), Gaps = 109/642 (16%)

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
           L + LR C  +  L      H   I        F+   L+  Y  C  + +A  L +   
Sbjct: 28  LADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEI 87

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES---------------------- 233
              N +    M+ GY++ G    A+E F  M    V S                      
Sbjct: 88  TEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFV 147

Query: 234 ----------NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
                     N FTF  ++ +C A+   +   Q+ G +     + +  VQ+AL+DM  +C
Sbjct: 148 SMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRC 207

Query: 284 GDLDSARRLLEYSEIDNE---------------------------------VSWNSMIVG 310
           G +D A +  ++S I N                                  VSWN +I  
Sbjct: 208 GAMDFASK--QFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISA 265

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
            ++ G  +EAL +   MH + ++ D  TY S L   A    L   K +H  +++      
Sbjct: 266 LSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHID 325

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
            +V +A++++YAK G    A  VF+ ++D++ +SWT LI G   +G + E+++ F+ MR 
Sbjct: 326 PYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRA 385

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
             +  D   +++++S C     +  G Q+H++ LKSG   ++ V NSL+ +YAKCG + +
Sbjct: 386 ELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQN 445

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR------------------ 532
           A  +F+ M  RD+++WT +I   +Q G   +A +F+D M  R                  
Sbjct: 446 AELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAE 505

Query: 533 --GTK------------PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA 578
             G K            PD++T+V L   C+  G  +          KV G+        
Sbjct: 506 EDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKV-GLILDTSVVN 564

Query: 579 CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM 638
            +I +  + G++ EA+   D  +   D   W A+++    HG   +G++A     ++   
Sbjct: 565 AVITMYSKCGRISEARKAFD-FLSRKDLVSWNAMITGYSQHG---MGKQAIEIFDDILNK 620

Query: 639 NAMP----YVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPG 676
            A P    YV + +  S +G  E+      +MK R     PG
Sbjct: 621 GAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMK-RDHNISPG 661


>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
           protein [Oryza sativa Japonica Group]
 gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 751

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 279/711 (39%), Positives = 420/711 (59%), Gaps = 37/711 (5%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  + L+++L   +  G L R  +          D N F    L+   A  + + + E L
Sbjct: 46  PPTFLLNHLLTAYAKSGRLARARR----VFDEMPDPNLFTRNALLSALAHSRLVPDMERL 101

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILTACAAVS 249
           F   P+ ++ V++  +ITG+S  G   ++++ +R + R E V   + T  +++   +A+S
Sbjct: 102 FASMPE-RDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALS 160

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE------------ 297
            R  G  VH  +L  GF A  +V S L+DMYAK G +  ARR+ +  E            
Sbjct: 161 DRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLIT 220

Query: 298 ------------------IDNE-VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
                             +D + ++W +M+ G  + G   EAL +F++M A  + ID +T
Sbjct: 221 GLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYT 280

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
           + S+L    +   L   K +H+ I +T +E   FV +AL+DMY+K  ++  A  VF  M 
Sbjct: 281 FGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMT 340

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
            +++ISWT++I G   +   EEA++ FS+M++ GI PD   + S++S+CA L  LE G Q
Sbjct: 341 CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQ 400

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK 518
            H + L SG    ++V N+LV +Y KCG I DA+R+FD M   D ++WTAL+ G AQ GK
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGK 460

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA 578
            KE +  +++MLA G KPD +TF+G+L ACS AGL E    YF+SM K +GI P  DHY 
Sbjct: 461 AKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYT 520

Query: 579 CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM 638
           CMIDL  RSG+  EA+  + QM   PDA  W  LLS+CR+ G++E+G+ AA NL E +P 
Sbjct: 521 CMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQ 580

Query: 639 NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPL 698
           N   YV L +M++  G+W + A +R+ M+ R ++KEPGCSW++  ++VHIF ++D+ HP 
Sbjct: 581 NPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPF 640

Query: 699 RTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA 758
            + IY K++ +   + E GY PD++  LH+V +  K   +++HSEKLA+AFGL+ +PQ  
Sbjct: 641 SSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEM 700

Query: 759 PIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           PIRI KNLRVC DCH A K+IS +  R I++RD+ RFH F  G CSCGD+W
Sbjct: 701 PIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 166/519 (31%), Positives = 270/519 (52%), Gaps = 39/519 (7%)

Query: 35  PASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP 94
           P   LN  L  ++ SG +  A ++F++M D + FT N +++A A+S  + + ++LF   P
Sbjct: 47  PTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMP 106

Query: 95  FKNFFTWSSLIYGYSNYGLDIEAFELFWQ-MQLEGYRPSQYTLDNVLRLCSLKGLLQRGE 153
            ++  ++++LI G+S+ G    + +L+   ++ E  RP++ TL  ++ + S       G 
Sbjct: 107 ERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGH 166

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAK-------------------------------CK 182
             H   ++  F   AFV + LVDMYAK                               CK
Sbjct: 167 SVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCK 226

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            I +A+ LF++  D ++ + WTTM+TG +QNG   +A++ FR MR EGV  +Q+TF SIL
Sbjct: 227 MIEDAKGLFQLMVD-RDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSIL 285

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           TAC A++A + G Q+H  I  + +E NV+V SAL+DMY+KC  +  A  +       N +
Sbjct: 286 TACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNII 345

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SW +MIVG+ +    +EA+  F +M    IK DDFT  SV++  A+   L      H L 
Sbjct: 346 SWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLA 405

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           + +G   Y  V+NAL+ +Y K G+++ A  +F+ M   D +SWT+L+TG A  G  +E +
Sbjct: 406 LVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETI 465

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS---LV 479
             F  M  +G+ PD V    +LSAC+   ++E G        K  G   + +D+    ++
Sbjct: 466 DLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGI--VPIDDHYTCMI 523

Query: 480 LVYAKCGCINDANRVFDSM-HTRDVITWTALIMGCAQNG 517
            +Y++ G   +A      M H+ D   W  L+  C   G
Sbjct: 524 DLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRG 562


>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
 gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
          Length = 814

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 296/773 (38%), Positives = 459/773 (59%), Gaps = 43/773 (5%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYG---YSNYGLDIEAFELFWQMQLE 127
           NT++  Y   G L +A K+F+    ++  +W+S+I     +  + + I+AF L   M +E
Sbjct: 51  NTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRL---MLME 107

Query: 128 GYRPSQYTLDNVLRLCS---LKGLLQRGEQFHGYAIKTCF---DLNAFVVTGLVDMYAKC 181
           G+ PS +TL ++   CS    +  L  G+Q HG     CF       F    L+ MYAK 
Sbjct: 108 GFEPSSFTLVSMALACSNLRKRDGLWLGKQIHG----CCFRKGHWRTFSNNALMAMYAKL 163

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
             + +A+ L  +F D ++ V W +MI+ +SQN    +A+   R M +EGV+ +  TF S+
Sbjct: 164 GRLDDAKSLLVLFED-RDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASV 222

Query: 242 LTACAAVSARDFGAQVHGCIL-SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           L AC+ +     G ++H   L +     N +V SAL+DMY  CG ++S R + + S +D 
Sbjct: 223 LPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFD-SVLDR 281

Query: 301 EVS-WNSMIVGFARQGFHKEALSLFKKMHAR-DIKIDDFTYPSVLNCFASNIDLNNAKSV 358
           ++  WN+MI G+A+    ++AL LF +M A   +  +  T  S++  +     ++  + +
Sbjct: 282 KIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGI 341

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           H  ++K G E  +++ NALIDMY++ G++  +  +F+ M+D+D++SW ++IT     G  
Sbjct: 342 HGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRS 401

Query: 419 EEALKYFSDM-RIS---------------GICPDHVVVSSILSACAELTVLEFGQQVHAV 462
            +AL    +M RI                   P+ + + ++L  CA L+ L  G+++HA 
Sbjct: 402 SDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAY 461

Query: 463 FLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEA 522
            +++   S ++V ++LV +YAKCGC+N A RVFD M  R+VITW  +IM    +GKGKE+
Sbjct: 462 AIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKES 521

Query: 523 LQFYDQMLARG-----TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY 577
           L+ ++ M+A G      KP  +TF+ L  +CSH+G+ +     F  M   +GI+P PDHY
Sbjct: 522 LELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHY 581

Query: 578 ACMIDLLGRSGKLIEAKALLDQMVGEPDAT-VWKALLSACRVHGDLELGERAANNLFELE 636
           AC++DL+GR+GK+ EA  L++ M    D    W +LL ACR++ ++E+GE AA NL +L+
Sbjct: 582 ACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQ 641

Query: 637 PMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGH 696
           P  A  YV LSN+YS+AG W+ A  +R+ MK+ G++KEPGCSW+E   +VH F++ D  H
Sbjct: 642 PDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSH 701

Query: 697 PLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQ 756
           P    ++  ++ +   +K+ GYVPD    LH+++EE KE  L  HSEKLA+AFG+L  P 
Sbjct: 702 PQSEKLHDFLETLSERLKKEGYVPDTACVLHDIDEEEKETILCGHSEKLAIAFGILNTPP 761

Query: 757 GAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           G  IR+ KNLRVC DCHTA K+IS +  R IILRD+ RFHHFK G CSCGDYW
Sbjct: 762 GTTIRVAKNLRVCNDCHTASKFISKIEDREIILRDARRFHHFKDGTCSCGDYW 814



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 142/475 (29%), Positives = 237/475 (49%), Gaps = 33/475 (6%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F+ N ++A YA  GRL +AK L      ++  TW+S+I  +S     +EA      M LE
Sbjct: 151 FSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLE 210

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDL-NAFVVTGLVDMYAKCKCIFE 186
           G +P   T  +VL  CS   LL+ G++ H YA++T   + N+FV + LVDMY  C  +  
Sbjct: 211 GVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVES 270

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR-VEGVESNQFTFPSILTA- 244
              +F    D K  + W  MI GY+Q+ +  KA+  F +M    G+ SN  T  SI+ A 
Sbjct: 271 GRLVFDSVLDRKIGL-WNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAY 329

Query: 245 --CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
             C  +S ++    +HG ++  G E N Y+Q+ALIDMY++ GD+ +++R+ +  E  + V
Sbjct: 330 VRCEGISRKE---GIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIV 386

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARD----------------IKIDDFTYPSVLNCF 346
           SWN++I  +   G   +AL L  +M   +                 K +  T  +VL   
Sbjct: 387 SWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGC 446

Query: 347 ASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWT 406
           AS   L   K +H+  ++        V +AL+DMYAK G L+ A  VF+ M  ++VI+W 
Sbjct: 447 ASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWN 506

Query: 407 SLITGCAYHGSYEEALKYFSDMRISG-----ICPDHVVVSSILSACAELTVLEFGQQV-H 460
            +I     HG  +E+L+ F DM   G     + P  V   ++ ++C+   +++ G  + H
Sbjct: 507 VIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFH 566

Query: 461 AVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT--RDVITWTALIMGC 513
            +  + G   +      +V +  + G + +A  + ++M +    V  W++L+  C
Sbjct: 567 KMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGAC 621



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 203/422 (48%), Gaps = 26/422 (6%)

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEA--NVYVQSALIDMYAKCGDLD 287
           G   + F FP++L A A +     G Q+H  +   G+ +  +V + + L++MY KCG L 
Sbjct: 5   GFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLG 64

Query: 288 SARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV-LNCF 346
            A ++ +     ++VSWNS+I    R    + A+  F+ M     +   FT  S+ L C 
Sbjct: 65  DAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALAC- 123

Query: 347 ASNIDLNN----AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV 402
            SN+   +     K +H    + G     F NNAL+ MYAK G LD A  +  L +D+D+
Sbjct: 124 -SNLRKRDGLWLGKQIHGCCFRKG-HWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDL 181

Query: 403 ISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAV 462
           ++W S+I+  + +  + EAL +   M + G+ PD V  +S+L AC+ L +L  G+++HA 
Sbjct: 182 VTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAY 241

Query: 463 FLKSGGCSSLS-VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKE 521
            L++      S V ++LV +Y  CG +     VFDS+  R +  W A+I G AQ+   ++
Sbjct: 242 ALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEK 301

Query: 522 ALQFYDQM-LARGTKPDYITFVGLLFA---CSHAGLAENARWYFESMDKVYGIKPGPDHY 577
           AL  + +M  A G   +  T   ++ A   C      E    Y        G++      
Sbjct: 302 ALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIK----RGLETNRYLQ 357

Query: 578 ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEP 637
             +ID+  R G +  +K + D M  + D   W  ++++  + G      R+++ L  L  
Sbjct: 358 NALIDMYSRMGDIKTSKRIFDSM-EDRDIVSWNTIITSYVICG------RSSDALLLLHE 410

Query: 638 MN 639
           M 
Sbjct: 411 MQ 412



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 180/376 (47%), Gaps = 27/376 (7%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           + F  + ++  Y N G++   + +F+    +    W+++I GY+    D +A  LF +M+
Sbjct: 251 NSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEME 310

Query: 126 -LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
              G   +  T+ +++        + R E  HGY IK   + N ++   L+DMY++   I
Sbjct: 311 AAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDI 370

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVE-------------- 229
             ++ +F    D ++ V+W T+IT Y   G    A+    +M R+E              
Sbjct: 371 KTSKRIFDSMED-RDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQ 429

Query: 230 -GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
              + N  T  ++L  CA++SA   G ++H   + +   + V V SAL+DMYAKCG L+ 
Sbjct: 430 VPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNL 489

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR-----DIKIDDFTYPSVL 343
           ARR+ +   I N ++WN +I+ +   G  KE+L LF+ M A      ++K  + T+ ++ 
Sbjct: 490 ARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALF 549

Query: 344 -NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD--K 400
            +C  S +        H +  + G E        ++D+  + G ++ A+ + N M     
Sbjct: 550 ASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFD 609

Query: 401 DVISWTSLITGC-AYH 415
            V +W+SL+  C  YH
Sbjct: 610 KVGAWSSLLGACRIYH 625



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 131/279 (46%), Gaps = 25/279 (8%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           L  AL+D +S  G+I  + ++F+ M DRD  +WNT+I +Y   GR  +A  L +E     
Sbjct: 356 LQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEM---- 411

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                  I   S Y  D      +   +   ++P+  TL  VL  C+    L +G++ H 
Sbjct: 412 -----QRIEEKSTYDGD------YNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHA 460

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
           YAI+        V + LVDMYAKC C+  A  +F   P  +N + W  +I  Y  +G G 
Sbjct: 461 YAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPI-RNVITWNVIIMAYGMHGKGK 519

Query: 218 KAIECFRDMRVEG-----VESNQFTFPSILTACAAVSARDFGAQV-HGCILSSGFEANVY 271
           +++E F DM  EG     V+  + TF ++  +C+     D G  + H      G E    
Sbjct: 520 ESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPD 579

Query: 272 VQSALIDMYAKCGDLDSARRLLEY--SEIDNEVSWNSMI 308
             + ++D+  + G ++ A  L+    S  D   +W+S++
Sbjct: 580 HYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLL 618



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 101/192 (52%), Gaps = 12/192 (6%)

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK--SGGCSSLSVDNSLVLVYAKCGCI 488
           SG  PD+    ++L A A +  L  G+Q+HA   K   G  SS+++DN+LV +Y KCG +
Sbjct: 4   SGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGL 63

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
            DA +VFD +  RD ++W ++I    +  + + A++ +  ML  G +P   T V +  AC
Sbjct: 64  GDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALAC 123

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYA-----CMIDLLGRSGKLIEAKALLDQMVGE 603
           S+     +  W  +   +++G      H+       ++ +  + G+L +AK+LL  +  +
Sbjct: 124 SNL-RKRDGLWLGK---QIHGCCFRKGHWRTFSNNALMAMYAKLGRLDDAKSLL-VLFED 178

Query: 604 PDATVWKALLSA 615
            D   W +++S+
Sbjct: 179 RDLVTWNSMISS 190


>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 287/745 (38%), Positives = 434/745 (58%), Gaps = 3/745 (0%)

Query: 66   DGFTWNTMIAAYANSGRLREAKKLFNETPFKN-FFTWSSLIYGYSNYGLDIEAFELFWQM 124
            +G     ++  Y + G LRE +++F+     N  F W+ ++  Y+  G   E+  LF +M
Sbjct: 485  EGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKM 544

Query: 125  QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
            Q  G   + YT   +L+  +  G +   ++ HG   K  F     VV  L+  Y K   +
Sbjct: 545  QKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEV 604

Query: 185  FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
              A  LF    D ++ V+W +MI+G   NG+   A+E F  M +  V  +  T  + + A
Sbjct: 605  DSAHKLFDELGD-RDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAA 663

Query: 245  CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
            CA V +   G  +HG  + + F   V   + L+DMY+KCG+L+ A +  E       VSW
Sbjct: 664  CANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSW 723

Query: 305  NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
             S+I  + R+G + +A+ LF +M ++ +  D ++  SVL+  A    L+  + VH+ I K
Sbjct: 724  TSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRK 783

Query: 365  TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
                    V+NAL+DMYAK G+++ A++VF+ +  KD++SW ++I G + +    EALK 
Sbjct: 784  NNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKL 843

Query: 425  FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
            F++M+     PD + ++ +L AC  L  LE G+ +H   L++G  S L V N+L+ +Y K
Sbjct: 844  FAEMQKESR-PDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVK 902

Query: 485  CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
            CG +  A  +FD +  +D+ITWT +I GC  +G G EA+  + +M   G KPD ITF  +
Sbjct: 903  CGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSI 962

Query: 545  LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
            L+ACSH+GL      +F SM     ++P  +HYACM+DLL R+G L +A  L++ M  +P
Sbjct: 963  LYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKP 1022

Query: 605  DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
            DAT+W ALL  CR+H D+EL E+ A ++FELEP NA  YV L+N+Y+ A KWE+  ++R+
Sbjct: 1023 DATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRE 1082

Query: 665  LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
             +  RG++K PGCSW+E   +   F+S D  HP    I+S ++ + + +K  G+ P M +
Sbjct: 1083 RIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGHSPKMRY 1142

Query: 725  ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
            AL N  +  KE+ L  HSEKLA+AFG+L LP G  IR+ KNLRVC DCH   K++S    
Sbjct: 1143 ALINAGDMEKEVALCGHSEKLAMAFGILNLPSGRTIRVAKNLRVCDDCHEMAKFMSKTTR 1202

Query: 785  RHIILRDSNRFHHFKAGNCSCGDYW 809
            R IILRDSNRFHHFK G CSC D+W
Sbjct: 1203 REIILRDSNRFHHFKDGFCSCRDFW 1227



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 156/504 (30%), Positives = 245/504 (48%), Gaps = 5/504 (0%)

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
           A EL    Q      + Y+  ++L+LC+    LQ G+  H         +   +   LV 
Sbjct: 437 AVELLRMSQKSELDLNAYS--SILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVF 494

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           MY  C  + E   +F           W  M++ Y++ G   ++I  F+ M+  G+  N +
Sbjct: 495 MYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSY 554

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           TF  IL   A +       ++HGC+   GF +   V ++LI  Y K G++DSA +L +  
Sbjct: 555 TFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDEL 614

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              + VSWNSMI G    GF   AL  F +M    + +D  T  + +   A+   L+  +
Sbjct: 615 GDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGR 674

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
           ++H   VK  F      NN L+DMY+K GNL+ A   F  M  K V+SWTSLI      G
Sbjct: 675 ALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREG 734

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
            Y++A++ F +M   G+ PD   ++S+L ACA    L+ G+ VH    K+     L V N
Sbjct: 735 LYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSN 794

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           +L+ +YAKCG + +A  VF  +  +D+++W  +I G ++N    EAL+ + +M  + ++P
Sbjct: 795 ALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEM-QKESRP 853

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           D IT   LL AC      E  R     + +  G          +ID+  + G L+ A+ L
Sbjct: 854 DGITMACLLPACGSLAALEIGRGIHGCILR-NGYSSELHVANALIDMYVKCGSLVHARLL 912

Query: 597 LDQMVGEPDATVWKALLSACRVHG 620
            D M+ E D   W  ++S C +HG
Sbjct: 913 FD-MIPEKDLITWTVMISGCGMHG 935



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 149/477 (31%), Positives = 239/477 (50%), Gaps = 35/477 (7%)

Query: 39   LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF 98
            +N  +  +  SGE+D A +LF+++ DRD  +WN+MI+                       
Sbjct: 591  VNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISG---------------------- 628

Query: 99   FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
                 ++ G+S+      A E F QM +        TL N +  C+  G L  G   HG 
Sbjct: 629  ----CVMNGFSH-----SALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQ 679

Query: 159  AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFK 218
             +K CF         L+DMY+KC  + +A   F+     K  V+WT++I  Y + G    
Sbjct: 680  GVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQ-KTVVSWTSLIAAYVREGLYDD 738

Query: 219  AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID 278
            AI  F +M  +GV  + ++  S+L ACA  ++ D G  VH  I  +     + V +AL+D
Sbjct: 739  AIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMD 798

Query: 279  MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
            MYAKCG ++ A  +     + + VSWN+MI G+++     EAL LF +M  ++ + D  T
Sbjct: 799  MYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQ-KESRPDGIT 857

Query: 339  YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
               +L    S   L   + +H  I++ G+     V NALIDMY K G+L  A ++F+++ 
Sbjct: 858  MACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIP 917

Query: 399  DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
            +KD+I+WT +I+GC  HG   EA+  F  MRI+GI PD +  +SIL AC+   +L  G  
Sbjct: 918  EKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWG 977

Query: 459  -VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
              +++  +      L     +V + A+ G ++ A  + ++M  + D   W AL+ GC
Sbjct: 978  FFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGC 1034



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/370 (33%), Positives = 191/370 (51%), Gaps = 4/370 (1%)

Query: 56   GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            GQ  +    R+    NT++  Y+  G L +A + F +   K   +W+SLI  Y   GL  
Sbjct: 678  GQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYD 737

Query: 116  EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
            +A  LF++M+ +G  P  Y++ +VL  C+    L +G   H Y  K    L   V   L+
Sbjct: 738  DAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALM 797

Query: 176  DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
            DMYAKC  + EA  +F   P  K+ V+W TMI GYS+N    +A++ F +M+ E    + 
Sbjct: 798  DMYAKCGSMEEAYLVFSQIPV-KDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RPDG 855

Query: 236  FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
             T   +L AC +++A + G  +HGCIL +G+ + ++V +ALIDMY KCG L  AR L + 
Sbjct: 856  ITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDM 915

Query: 296  SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
                + ++W  MI G    G   EA++ F+KM    IK D+ T+ S+L   + +  LN  
Sbjct: 916  IPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEG 975

Query: 356  KS-VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCA 413
                +S+I +   E        ++D+ A+ GNL  A+ +   M  K D   W +L+ GC 
Sbjct: 976  WGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCR 1035

Query: 414  YHGSYEEALK 423
             H   E A K
Sbjct: 1036 IHHDVELAEK 1045



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 208/410 (50%), Gaps = 5/410 (1%)

Query: 205 TMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS 264
           T I  + + G    A+E  R  +   ++ N ++  SIL  CA       G  VH  I S+
Sbjct: 423 TKICKFCEVGDLRNAVELLRMSQKSELDLNAYS--SILQLCAEHKCLQEGKMVHSVISSN 480

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV-SWNSMIVGFARQGFHKEALSL 323
           G      + + L+ MY  CG L   RR+ ++   DN+V  WN M+  +A+ G ++E++ L
Sbjct: 481 GIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYL 540

Query: 324 FKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK 383
           FKKM    I  + +T+  +L CFA+   +   K +H  + K GF  Y  V N+LI  Y K
Sbjct: 541 FKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFK 600

Query: 384 QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSI 443
            G +D A  +F+ + D+DV+SW S+I+GC  +G    AL++F  M I  +  D   + + 
Sbjct: 601 SGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNS 660

Query: 444 LSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDV 503
           ++ACA +  L  G+ +H   +K+     +  +N+L+ +Y+KCG +NDA + F+ M  + V
Sbjct: 661 VAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTV 720

Query: 504 ITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFES 563
           ++WT+LI    + G   +A++ + +M ++G  PD  +   +L AC+     +  R     
Sbjct: 721 VSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNY 780

Query: 564 MDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
           + K       P   A M D+  + G + EA  +  Q +   D   W  ++
Sbjct: 781 IRKNNMALCLPVSNALM-DMYAKCGSMEEAYLVFSQ-IPVKDIVSWNTMI 828



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 157/352 (44%), Gaps = 41/352 (11%)

Query: 23   ARYTHNV--GNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
             R  HN    N++     ++ AL+D ++  G ++EA  +F ++  +D  +WNTMI  Y  
Sbjct: 774  GRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGY-- 831

Query: 80   SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
                                         S   L  EA +LF +MQ E  RP   T+  +
Sbjct: 832  -----------------------------SKNSLPNEALKLFAEMQKES-RPDGITMACL 861

Query: 140  LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKN 199
            L  C     L+ G   HG  ++  +     V   L+DMY KC  +  A  LF M P+ K+
Sbjct: 862  LPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPE-KD 920

Query: 200  HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG 259
             + WT MI+G   +G G +AI  F+ MR+ G++ ++ TF SIL AC+     + G     
Sbjct: 921  LITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFN 980

Query: 260  CILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIVGFARQGFH 317
             ++S    E  +   + ++D+ A+ G+L  A  L+E   I  + + W +++ G   +  H
Sbjct: 981  SMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGC--RIHH 1038

Query: 318  KEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTGFE 368
               L+     H  +++ D+  Y  +L N +A        K +   I K G +
Sbjct: 1039 DVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLK 1090


>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
          Length = 1008

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 306/774 (39%), Positives = 443/774 (57%), Gaps = 28/774 (3%)

Query: 39   LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF 98
            LN  L    +SG +  A  +F++M  ++ F+ N +++AY++SG L  A+ LF  +P +N 
Sbjct: 260  LNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNA 319

Query: 99   FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRL--CSLKGLLQRGEQFH 156
             TW+ ++  ++  G   +A  LF  M  EG  P + T+  VL L  C++  L       H
Sbjct: 320  TTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPSL-------H 372

Query: 157  GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
             +AIK   D + FV   L+D Y K   +  A  +F    D K+ V +  M+ G S+ G  
Sbjct: 373  PFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHD-KDAVTYNAMMMGCSKEGLH 431

Query: 217  FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
             +A++ F  MR  G   +    P  L   +   +R            S    NV+V ++L
Sbjct: 432  TQALQLFAAMRRAGYSRH----PLHLLQYSHSRSR------------STSVLNVFVNNSL 475

Query: 277  IDMYAKCGDLDSARRLL-EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
            +D Y+KC  LD  RRL  E  E DN VS+N +I  +A        L LF++M        
Sbjct: 476  LDFYSKCDCLDDMRRLFDEMPERDN-VSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQ 534

Query: 336  DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
               Y ++L+   S  D++  K +H+ +V  G      + NALIDMY+K G LD A   F+
Sbjct: 535  VLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFS 594

Query: 396  LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
               +K  ISWT+LITG   +G +EEAL+ FSDMR +G+ PD    SSI+ A + L ++  
Sbjct: 595  NRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGL 654

Query: 456  GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
            G+Q+H+  ++SG  SS+   + LV +YAKCGC+++A R FD M  R+ I+W A+I   A 
Sbjct: 655  GRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAH 714

Query: 516  NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
             G+ K A++ ++ ML  G  PD +TF+ +L ACSH GLA+    YF  M   Y I P  +
Sbjct: 715  YGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKE 774

Query: 576  HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
            HYAC+ID LGR G   + + +L +M  + D  +W ++L +CR+HG+ EL   AA+ LF +
Sbjct: 775  HYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGM 834

Query: 636  EPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG 695
            EP +A PYV LSN+Y+ AG+WEDAA V+K+M+ RG+RKE G SWVE   +++ F S D  
Sbjct: 835  EPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLT 894

Query: 696  HPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLP 755
             P+  +I  ++D +   + + GY PD+  ALH V+ E K   L YHSE+LA+AF L+  P
Sbjct: 895  SPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSERLAIAFALMNTP 954

Query: 756  QGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             G PIRI KNL  C DCH  +K IS +  R II+RDS RFHHFK G CSCGDYW
Sbjct: 955  AGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVCSCGDYW 1008


>gi|357126224|ref|XP_003564788.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Brachypodium distachyon]
          Length = 515

 Score =  551 bits (1421), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 269/509 (52%), Positives = 360/509 (70%), Gaps = 1/509 (0%)

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHA-RDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
           V++N+ I   +R G H+ AL+LF +M A R +  D++T+P +LN  A       A ++H+
Sbjct: 7   VAYNAAISRCSRAGLHQRALALFHEMRAARGLPADEYTFPPILNSAALLRVPAAADALHA 66

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
           L+++ G   +  V NAL+D YAK      A  +F+ M  +DV++WTSL+TG A  GS++ 
Sbjct: 67  LLLRAGLVAHLHVANALVDAYAKLSRGGAARALFDEMPRRDVVTWTSLLTGLARSGSHDA 126

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
           AL+ + DM  SG+ PD  VV++ LS+CA  T LE GQ VHA  ++ G    LSV NSLV 
Sbjct: 127 ALRVYRDMVASGVEPDEYVVAAALSSCAGSTTLELGQSVHATAVRLGLEPFLSVGNSLVS 186

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           +YAK G + +A +VFD+   R  +TWTALI+G AQNG+G+E+LQ Y +M+  G +PDY+T
Sbjct: 187 MYAKTGSLREARKVFDATRLRCPVTWTALIVGYAQNGRGEESLQVYAEMVHSGCRPDYVT 246

Query: 541 FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
           F+GLLFACSHAGL +  R +F+SM   +GI PGPDHYACM+D+LGR+G+L EA  LLDQ 
Sbjct: 247 FIGLLFACSHAGLVDAGRAHFKSMQADHGITPGPDHYACMVDVLGRAGRLDEAMELLDQS 306

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAA 660
             + DATVWKALL ACR H + EL ERAA  ++ L+P +A+PY+ LSN+YS   +W D A
Sbjct: 307 TMKLDATVWKALLGACRTHRNAELAERAAEMVWRLDPTDAVPYIMLSNLYSRERRWSDVA 366

Query: 661 RVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
           R+R LMKSRGI KEPGCSWV  +   H+F  EDRGHP   +IY K++E+M  ++  G+V 
Sbjct: 367 RIRTLMKSRGIAKEPGCSWVVASGVTHLFYVEDRGHPRTDEIYRKVEEMMEKVRAEGFVA 426

Query: 721 DMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYIS 780
           D ++AL +   EG+E GLA+HSE+LAVAFGLL LP GAP+R+FKNLRVCGDCH A+K ++
Sbjct: 427 DTDWALQDEAPEGREKGLAHHSERLAVAFGLLALPAGAPVRVFKNLRVCGDCHVAIKMVA 486

Query: 781 AVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            VY R IILRDSN FHH + G CSCGDYW
Sbjct: 487 KVYGREIILRDSNCFHHMRDGVCSCGDYW 515



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 188/356 (52%), Gaps = 9/356 (2%)

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV-EGVESNQFTFPSILTACAAVSAR 251
           + P G   VA+   I+  S+ G   +A+  F +MR   G+ ++++TFP IL + A +   
Sbjct: 2   VVPPG---VAYNAAISRCSRAGLHQRALALFHEMRAARGLPADEYTFPPILNSAALLRVP 58

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
                +H  +L +G  A+++V +AL+D YAK     +AR L +     + V+W S++ G 
Sbjct: 59  AAADALHALLLRAGLVAHLHVANALVDAYAKLSRGGAARALFDEMPRRDVVTWTSLLTGL 118

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
           AR G H  AL +++ M A  ++ D++   + L+  A +  L   +SVH+  V+ G E + 
Sbjct: 119 ARSGSHDAALRVYRDMVASGVEPDEYVVAAALSSCAGSTTLELGQSVHATAVRLGLEPFL 178

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
            V N+L+ MYAK G+L  A  VF+  + +  ++WT+LI G A +G  EE+L+ +++M  S
Sbjct: 179 SVGNSLVSMYAKTGSLREARKVFDATRLRCPVTWTALIVGYAQNGRGEESLQVYAEMVHS 238

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLVLVYAKCGCIN 489
           G  PD+V    +L AC+   +++ G + H   +++    +   D+   +V V  + G ++
Sbjct: 239 GCRPDYVTFIGLLFACSHAGLVDAG-RAHFKSMQADHGITPGPDHYACMVDVLGRAGRLD 297

Query: 490 DANRVFD-SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           +A  + D S    D   W AL+  C +  +  E  +   +M+ R    D + ++ L
Sbjct: 298 EAMELLDQSTMKLDATVWKALLGAC-RTHRNAELAERAAEMVWRLDPTDAVPYIML 352



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 152/318 (47%), Gaps = 8/318 (2%)

Query: 109 SNYGLDIEAFELFWQMQL-EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLN 167
           S  GL   A  LF +M+   G    +YT   +L   +L  +    +  H   ++     +
Sbjct: 17  SRAGLHQRALALFHEMRAARGLPADEYTFPPILNSAALLRVPAAADALHALLLRAGLVAH 76

Query: 168 AFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR 227
             V   LVD YAK      A  LF   P  ++ V WT+++TG +++G    A+  +RDM 
Sbjct: 77  LHVANALVDAYAKLSRGGAARALFDEMPR-RDVVTWTSLLTGLARSGSHDAALRVYRDMV 135

Query: 228 VEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLD 287
             GVE +++   + L++CA  +  + G  VH   +  G E  + V ++L+ MYAK G L 
Sbjct: 136 ASGVEPDEYVVAAALSSCAGSTTLELGQSVHATAVRLGLEPFLSVGNSLVSMYAKTGSLR 195

Query: 288 SARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFA 347
            AR++ + + +   V+W ++IVG+A+ G  +E+L ++ +M     + D  T+  +L  FA
Sbjct: 196 EARKVFDATRLRCPVTWTALIVGYAQNGRGEESLQVYAEMVHSGCRPDYVTFIGLL--FA 253

Query: 348 -SNIDLNNAKSVH--SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVI 403
            S+  L +A   H  S+    G          ++D+  + G LD A  + +    K D  
Sbjct: 254 CSHAGLVDAGRAHFKSMQADHGITPGPDHYACMVDVLGRAGRLDEAMELLDQSTMKLDAT 313

Query: 404 SWTSLITGCAYHGSYEEA 421
            W +L+  C  H + E A
Sbjct: 314 VWKALLGACRTHRNAELA 331



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 130/298 (43%), Gaps = 2/298 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++ AYA   R   A+ LF+E P ++  TW+SL+ G +  G    A  ++  M   G  
Sbjct: 81  NALVDAYAKLSRGGAARALFDEMPRRDVVTWTSLLTGLARSGSHDAALRVYRDMVASGVE 140

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P +Y +   L  C+    L+ G+  H  A++   +    V   LV MYAK   + EA  +
Sbjct: 141 PDEYVVAAALSSCAGSTTLELGQSVHATAVRLGLEPFLSVGNSLVSMYAKTGSLREARKV 200

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F      +  V WT +I GY+QNG G ++++ + +M   G   +  TF  +L AC+    
Sbjct: 201 FDAT-RLRCPVTWTALIVGYAQNGRGEESLQVYAEMVHSGCRPDYVTFIGLLFACSHAGL 259

Query: 251 RDFG-AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
            D G A         G        + ++D+  + G LD A  LL+ S +  + +    ++
Sbjct: 260 VDAGRAHFKSMQADHGITPGPDHYACMVDVLGRAGRLDEAMELLDQSTMKLDATVWKALL 319

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           G  R   + E      +M  R    D   Y  + N ++     ++   + +L+   G 
Sbjct: 320 GACRTHRNAELAERAAEMVWRLDPTDAVPYIMLSNLYSRERRWSDVARIRTLMKSRGI 377


>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 287/802 (35%), Positives = 454/802 (56%), Gaps = 13/802 (1%)

Query: 9   LNFSLRCRSKIIGPARYTH-NVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDG 67
           L +    R K + P  +T  +V NS     DL    +   ++ E+      FE     D 
Sbjct: 106 LGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMG-----FES----DL 156

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           +  N +I  Y+    L  A+ +F E   ++  +W+SLI GY + G   +A +++ + ++ 
Sbjct: 157 YIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMT 216

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G  P  +T+ +VL  C     ++ G   HG   K     +  +  GL+ MY K + + EA
Sbjct: 217 GMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREA 276

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F      K+ V W TMI GY+Q G    +++ F DM ++G   +  +  S + AC  
Sbjct: 277 RRVFSKMA-VKDSVTWNTMICGYAQLGRHEASVKLFMDM-IDGFVPDMLSITSTIRACGQ 334

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
                 G  VH  ++ SGFE +    + LIDMYAKCGDL +A+ + + ++  + V+WNS+
Sbjct: 335 SGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSL 394

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I G+ + G++KE L  FK M   + K D  T+  +L+ F+   D+N  + +H  ++K GF
Sbjct: 395 INGYTQSGYYKEGLESFKMMKM-ERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGF 453

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
           E    + N+L+D+YAK G +D    VF+ M   D+ISW ++I    +        +  ++
Sbjct: 454 EAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINE 513

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           MR  G+ PD   V  IL  C+ L V   G+++H    KSG  S++ + N+L+ +Y+KCG 
Sbjct: 514 MRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGS 573

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           + +  +VF  M  +DV+TWTALI      G+GK+AL+ +  M   G  PD + F+  +FA
Sbjct: 574 LENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFA 633

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
           CSH+G+ +    +F+ M   Y ++P  +HYAC++DLL RSG L +A+  +  M  +PDA+
Sbjct: 634 CSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDAS 693

Query: 608 VWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
           +W ALLSACR  G+  + +R +  + EL   +   YV +SN+Y+T GKW+    VR  MK
Sbjct: 694 LWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMK 753

Query: 668 SRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALH 727
           ++G++KEPG SW+E   +V++F + D+       +   ++ ++ L+ + GYV D+ FALH
Sbjct: 754 TKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQFALH 813

Query: 728 NVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHI 787
           +VEE+ K   L  HSE+LA+AFGLL    G+P+ + KNLRVCGDCHT  KYI+ +  R I
Sbjct: 814 DVEEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREI 873

Query: 788 ILRDSNRFHHFKAGNCSCGDYW 809
           ++RD+NRFH FK G CSCGD+W
Sbjct: 874 LVRDANRFHRFKDGACSCGDHW 895



 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 174/632 (27%), Positives = 308/632 (48%), Gaps = 23/632 (3%)

Query: 22  PARYTHNVGNSVKPASD-LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNT-----MIA 75
           P ++  N  N+ +P+ + L  +L+   +S +     +    +    G + +      +I+
Sbjct: 3   PPKFCSNFNNTPEPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLIS 62

Query: 76  AYANSGRLREAKKLFNE-TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQY 134
            YA       +  +F   +P  N + W+S+I   ++ GL  +A   + +M+ +  +P  +
Sbjct: 63  KYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAF 122

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
           T  +V+  C+    L+ G   H +A++  F+ + ++   L+DMY++   +  A Y+F+  
Sbjct: 123 TFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEM 182

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
            + ++ V+W ++I+GY  NG+   A++ +   R+ G+  + FT  S+L AC ++ A   G
Sbjct: 183 SN-RDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEG 241

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
             VHG I   G   +V + + L+ MY K   L  ARR+     + + V+WN+MI G+A+ 
Sbjct: 242 VAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQL 301

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
           G H+ ++ LF  M    +  D  +  S +     + DL   K VH  ++ +GFE      
Sbjct: 302 GRHEASVKLFMDMIDGFVP-DMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVAC 360

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           N LIDMYAK G+L  A  VF+  + KD ++W SLI G    G Y+E L+ F  M++    
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERK- 419

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           PD V    +LS  ++L  +  G+ +H   +K G  + L + NSL+ VYAKCG ++D  +V
Sbjct: 420 PDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKV 479

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
           F  M   D+I+W  +I             Q  ++M   G  PD  T +G+L  CS   + 
Sbjct: 480 FSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVR 539

Query: 555 ENAR----WYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
              +    + F+S     G +        +I++  + G L     +   M  E D   W 
Sbjct: 540 RQGKEIHGYIFKS-----GFESNVPIGNALIEMYSKCGSLENCIKVFKYM-KEKDVVTWT 593

Query: 611 ALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           AL+SA  ++G+   G++A     ++E    +P
Sbjct: 594 ALISAFGMYGE---GKKALKAFQDMELSGVLP 622


>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 289/753 (38%), Positives = 437/753 (58%), Gaps = 1/753 (0%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
            + ++ +  D F  N ++  Y  S  L++A KLF+E P  N  ++ +L  GYS      +
Sbjct: 60  HILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQ 119

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
           A     ++  EG+  + +    +L+L     L       H    K     +AFV T L+D
Sbjct: 120 ALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALID 179

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
            Y+    +  A ++F      K+ V+WT M+  Y++N +  ++++ F  MR+ G + N F
Sbjct: 180 AYSVRGNVDVARHVFDDIC-CKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNF 238

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           T    L +C  + A + G  VHGC L   ++ +++V  AL+++YAK G++  A+RL E  
Sbjct: 239 TISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEM 298

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              + + W+ MI  +A+    KEAL LF +M    +  ++FT+ SVL   AS++ L+  K
Sbjct: 299 PKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGK 358

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +HS ++K G     FV+NA++D+YAK G ++ +  +F  + D++ ++W ++I G    G
Sbjct: 359 QIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLG 418

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
             E A+  F+ M    + P  V  SS+L A A L  LE G Q+H++ +K+       V N
Sbjct: 419 DGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVAN 478

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           SL+ +YAKCG INDA   FD M+ RD ++W A+I G + +G   EAL  +D M     KP
Sbjct: 479 SLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKP 538

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           + +TFVG+L ACS+AGL    + +FESM K Y IKP  +HY CM+ LLGR G+  EA  L
Sbjct: 539 NKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKL 598

Query: 597 LDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
           + ++  +P   VW+ALL AC +H  ++LG   A ++ E+EP +   +V LSNMY+TAG+W
Sbjct: 599 IGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRW 658

Query: 657 EDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA 716
           ++ A VRK M+ + +RKEPG SWVE    VH F   D  HP    I + ++ +    ++A
Sbjct: 659 DNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAMLEWLNKKTRDA 718

Query: 717 GYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAM 776
           GYVPD N  L +V+++ KE  L  HSE+LA+A+GL+  P    IRI KNLR+C DCHT M
Sbjct: 719 GYVPDCNAVLLDVQDDEKERHLWVHSERLALAYGLIRTPLSCSIRIIKNLRICIDCHTVM 778

Query: 777 KYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           K IS V  R I++RD NRFHHF+ G CSCGDYW
Sbjct: 779 KLISKVVQREIVIRDINRFHHFRHGVCSCGDYW 811



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 151/480 (31%), Positives = 250/480 (52%), Gaps = 35/480 (7%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           AL+D +S  G +D A  +F+ +  +D  +W  M+A YA +    E+ +LFN         
Sbjct: 176 ALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFN--------- 226

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
                                 QM++ GY+P+ +T+   L+ C        G+  HG A+
Sbjct: 227 ----------------------QMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCAL 264

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAI 220
           K C+D + FV   L+++YAK   I +A+ LF+  P   + + W+ MI  Y+Q+    +A+
Sbjct: 265 KGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPK-TDLIPWSLMIARYAQSDRSKEAL 323

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
           + F  MR   V  N FTF S+L ACA+  + D G Q+H C+L  G  +NV+V +A++D+Y
Sbjct: 324 DLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVY 383

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
           AKCG+++++ +L E     N+V+WN++IVG+ + G  + A++LF  M   D++  + TY 
Sbjct: 384 AKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYS 443

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
           SVL   AS   L     +HSL +KT +     V N+LIDMYAK G ++ A + F+ M  +
Sbjct: 444 SVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKR 503

Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
           D +SW ++I G + HG   EAL  F  M+ +   P+ +    +LSAC+   +L  GQ   
Sbjct: 504 DEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHF 563

Query: 461 AVFLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDSM-HTRDVITWTALIMGCAQNGK 518
               K       +     +V +  + G  ++A ++   + +   V+ W AL+  C  + K
Sbjct: 564 ESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKK 623



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 190/389 (48%), Gaps = 5/389 (1%)

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           G  +H  IL  G   +++ Q+ L++ Y +   L  A +L +     N +S+ ++  G++R
Sbjct: 54  GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
                +AL    ++     +++ F + ++L    S    +   ++H+ + K G     FV
Sbjct: 114 DHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFV 173

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
             ALID Y+ +GN+D A  VF+ +  KD++SWT ++   A +  YEE+L+ F+ MRI G 
Sbjct: 174 GTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGY 233

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
            P++  +S  L +C  L     G+ VH   LK      L V  +L+ +YAK G I DA R
Sbjct: 234 KPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQR 293

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGL 553
           +F+ M   D+I W+ +I   AQ+ + KEAL  + +M      P+  TF  +L AC+ +  
Sbjct: 294 LFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVS 353

Query: 554 AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
            +  +     + K +G+         ++D+  + G++  +  L +++    D T W  ++
Sbjct: 354 LDLGKQIHSCVLK-FGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVT-WNTII 411

Query: 614 SACRVHGDLELGERAANNLFELEPMNAMP 642
                 GD   GERA N    +   +  P
Sbjct: 412 VGYVQLGD---GERAMNLFTHMLEHDMQP 437



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 119/258 (46%), Gaps = 36/258 (13%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           ++ A++D ++  GEI+ + +LFE++ DR+  TWNT+I                       
Sbjct: 375 VSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIV---------------------- 412

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                    GY   G    A  LF  M     +P++ T  +VLR  +    L+ G Q H 
Sbjct: 413 ---------GYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHS 463

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
             IKT ++ +  V   L+DMYAKC  I +A   F    + ++ V+W  MI GYS +G   
Sbjct: 464 LTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKM-NKRDEVSWNAMICGYSMHGMSM 522

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ--SA 275
           +A+  F  M+    + N+ TF  +L+AC+      +  Q H   +S  ++    ++  + 
Sbjct: 523 EALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLL-YKGQAHFESMSKDYDIKPCIEHYTC 581

Query: 276 LIDMYAKCGDLDSARRLL 293
           ++ +  + G  D A +L+
Sbjct: 582 MVWLLGRLGRFDEAMKLI 599


>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 283/744 (38%), Positives = 443/744 (59%), Gaps = 4/744 (0%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFK-NFFTWSSLIYGYSNYGLDIEAFELFWQMQL 126
           F  N+++  Y     L  A++LF+  P K +  +W+S+I  YS+ G  IEA  LF +MQ 
Sbjct: 216 FVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQK 275

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
               P+ YT    L+ C     +++G   H   +K+ + +N FV   L+ MYA+   + E
Sbjct: 276 ASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGE 335

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A  +F    D  + ++W +M++G+ QNG   +A++ + +MR  G + +     SI+ A A
Sbjct: 336 AANIFYNMDDW-DTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASA 394

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
                  G Q+H   + +G ++++ V ++L+DMYAK   +     + +     + VSW +
Sbjct: 395 RSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTT 454

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           +I G A+ G H  AL LF+++    I +D     S+L   +    +++ K +HS I++ G
Sbjct: 455 IIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKG 514

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
                 + N ++D+Y + GN+D A  +F L++ KDV+SWTS+I+   ++G   EAL+ F 
Sbjct: 515 LSDL-VLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFH 573

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
            M+ +G+ PD + + SILSA A L+ L+ G+++H   ++ G     S+ ++LV +YA+CG
Sbjct: 574 LMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCG 633

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
            +  +  VF+ +  +D++ WT++I     +G G+ A+  + +M      PD+I FV +L+
Sbjct: 634 TLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLY 693

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ACSH+GL    R + ESM   Y ++P P+HYAC++DLLGR+  L EA   +  M  EP A
Sbjct: 694 ACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTA 753

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
            VW ALL AC++H + ELGE AA  L E++P N   YV +SN+YS   +W+D   VR  M
Sbjct: 754 EVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRM 813

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIM-LLIKEAGYVPDMNFA 725
           K+ G++K PGCSW+E  ++VH F++ D+ HP   +IYSK+ +I   L KE GYV    F 
Sbjct: 814 KASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFV 873

Query: 726 LHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLR 785
           LHN +EE K   L  HSE+LA+A+G+LT P+GA +RI KNLRVCGDCH   K IS  + R
Sbjct: 874 LHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFFER 933

Query: 786 HIILRDSNRFHHFKAGNCSCGDYW 809
            +++RD+NRFHHFK G CSCGD W
Sbjct: 934 ELVMRDANRFHHFKGGVCSCGDVW 957



 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 174/566 (30%), Positives = 302/566 (53%), Gaps = 7/566 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F    ++  Y   G L +A+KLF+  P K  FTW+++I  Y   G  + + EL+ +M++ 
Sbjct: 115 FLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVS 174

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G      T   +L+ C L    + G + HG AIK  +    FV   +V MY KC  +  A
Sbjct: 175 GIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGA 234

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             LF   P+ ++ V+W +MI+ YS NG   +A+  F +M+   +  N +TF + L AC  
Sbjct: 235 RQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACED 294

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
            S    G  +H  +L S +  NV+V +ALI MYA+ G +  A  +    +  + +SWNSM
Sbjct: 295 SSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSM 354

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           + GF + G + EAL  + +M     K D     S++   A + +  +   +H+  +K G 
Sbjct: 355 LSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGL 414

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
           +    V N+L+DMYAK  ++     +F+ M DKDV+SWT++I G A +GS+  AL+ F +
Sbjct: 415 DSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFRE 474

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           +++ GI  D +++SSIL AC+ L ++   +++H+  ++  G S L + N +V VY +CG 
Sbjct: 475 VQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRK-GLSDLVLQNGIVDVYGECGN 533

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           ++ A R+F+ +  +DV++WT++I     NG   EAL+ +  M   G +PD I+ V +L A
Sbjct: 534 VDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSA 593

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
            +     +  +     + +   +  G    + ++D+  R G L +++ + +  +   D  
Sbjct: 594 AASLSALKKGKEIHGFLIRKGFVLEG-SLASTLVDMYARCGTLEKSRNVFN-FIRNKDLV 651

Query: 608 VWKALLSACRVHGDLELGERAANNLF 633
           +W ++++A  +HG      RAA +LF
Sbjct: 652 LWTSMINAYGMHG----CGRAAIDLF 673



 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 179/514 (34%), Positives = 273/514 (53%), Gaps = 23/514 (4%)

Query: 131 PSQYTLD----NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA-FVVTGLVDMYAKCKCIF 185
           PSQ++LD    +VL LC  K  L  G+Q H + I +    N+ F+ T LV MY KC C+ 
Sbjct: 72  PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLV 131

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +AE LF   P  K    W  MI  Y  NG    ++E +R+MRV G+  +  TFP IL AC
Sbjct: 132 DAEKLFDGMPH-KTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKAC 190

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE-YSEIDNEVSW 304
             +  R +GA+VHG  +  G+ + V+V ++++ MY KC DL+ AR+L +   E ++ VSW
Sbjct: 191 GLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSW 250

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           NSMI  ++  G   EAL LF +M    +  + +T+ + L     +  +     +H+ ++K
Sbjct: 251 NSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLK 310

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
           + +    FV NALI MYA+ G +  A  +F  M D D ISW S+++G   +G Y EAL++
Sbjct: 311 SSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQF 370

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           + +MR +G  PD V V SI++A A       G Q+HA  +K+G  S L V NSLV +YAK
Sbjct: 371 YHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAK 430

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
              +   + +FD M  +DV++WT +I G AQNG    AL+ + ++   G   D +    +
Sbjct: 431 FCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSI 490

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC---MIDLLGRSGKLIEAKALLDQMV 601
           L ACS   L  + +         Y I+ G         ++D+ G  G  ++  A + +++
Sbjct: 491 LLACSGLKLISSVKEIHS-----YIIRKGLSDLVLQNGIVDVYGECGN-VDYAARMFELI 544

Query: 602 GEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
              D   W +++S C VH  L      AN   EL
Sbjct: 545 EFKDVVSWTSMIS-CYVHNGL------ANEALEL 571



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 217/427 (50%), Gaps = 37/427 (8%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  ++  G++ EA  +F  M D D  +WN+M++                        
Sbjct: 321 NALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLS------------------------ 356

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
                  G+   GL  EA + + +M+  G +P    + +++   +  G    G Q H YA
Sbjct: 357 -------GFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYA 409

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           +K   D +  V   LVDMYAK   +   + +F   PD K+ V+WTT+I G++QNG   +A
Sbjct: 410 MKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPD-KDVVSWTTIIAGHAQNGSHSRA 468

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           +E FR++++EG++ +     SIL AC+ +       ++H  I+  G  +++ +Q+ ++D+
Sbjct: 469 LELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDV 527

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           Y +CG++D A R+ E  E  + VSW SMI  +   G   EAL LF  M    ++ D  + 
Sbjct: 528 YGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISL 587

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
            S+L+  AS   L   K +H  +++ GF     + + L+DMYA+ G L+ +  VFN +++
Sbjct: 588 VSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRN 647

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           KD++ WTS+I     HG    A+  F  M    I PDH+   ++L AC+   ++  G++ 
Sbjct: 648 KDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRR- 706

Query: 460 HAVFLKS 466
              FL+S
Sbjct: 707 ---FLES 710



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 213/423 (50%), Gaps = 12/423 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D    N+++  YA    ++    +F++ P K+  +W+++I G++  G    A ELF +
Sbjct: 415 DSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFRE 474

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           +QLEG       + ++L  CS   L+   ++ H Y I+     +  +  G+VD+Y +C  
Sbjct: 475 VQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECGN 533

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +  A  +F++  + K+ V+WT+MI+ Y  NG   +A+E F  M+  GVE +  +  SIL+
Sbjct: 534 VDYAARMFELI-EFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILS 592

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           A A++SA   G ++HG ++  GF     + S L+DMYA+CG L+ +R +  +    + V 
Sbjct: 593 AAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVL 652

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLI 362
           W SMI  +   G  + A+ LF++M    I  D   + +VL  C  S +     + + S+ 
Sbjct: 653 WTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMK 712

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEA 421
            +   E +      L+D+  +  +L+ A+     M+ +     W +L+  C  H + E  
Sbjct: 713 YEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKE-- 770

Query: 422 LKYFSDMRISGICPD----HVVVSSILSACAELTVLEFGQ-QVHAVFLKSG-GCSSLSVD 475
           L   +  ++  + P+    +V+VS++ SA      +E  + ++ A  LK   GCS + V 
Sbjct: 771 LGEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVG 830

Query: 476 NSL 478
           N +
Sbjct: 831 NKV 833



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 33/209 (15%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           L   +VD +   G +D A ++FE +  +D  +W +MI+ Y ++                 
Sbjct: 520 LQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHN----------------- 562

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                         GL  EA ELF  M+  G  P   +L ++L   +    L++G++ HG
Sbjct: 563 --------------GLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHG 608

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
           + I+  F L   + + LVDMYA+C  + ++  +F  F   K+ V WT+MI  Y  +G G 
Sbjct: 609 FLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFN-FIRNKDLVLWTSMINAYGMHGCGR 667

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACA 246
            AI+ FR M  E +  +   F ++L AC+
Sbjct: 668 AAIDLFRRMEDESIAPDHIAFVAVLYACS 696


>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
 gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
          Length = 820

 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 295/753 (39%), Positives = 438/753 (58%), Gaps = 1/753 (0%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
           ++ +K +  D F  N ++  Y     L +A KLF+E P +N  ++ +LI GYS      E
Sbjct: 69  EIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSE 128

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
           A  LF ++Q EG+  + +    VL+L       + G   H    K  FD +AFV T L+D
Sbjct: 129 AIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALID 188

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
            Y+ C     A  +F    + K+ V+WT M+  Y +N    ++++ F  MR+ G + N F
Sbjct: 189 CYSVCGYAECARQVFDAI-EYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNF 247

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           TF S+L AC  +   + G  VHGC   + +   ++V   LID+Y K GD+D A ++ E  
Sbjct: 248 TFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEM 307

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
             D+ + W+ MI  +A+    +EA+ +F +M    +  + FT  S+L   AS +DL    
Sbjct: 308 PKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGN 367

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H  +VK G +   FV+NAL+DMYAK G ++ +  +F+   +   +SW ++I G    G
Sbjct: 368 QIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAG 427

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
           + E+AL  F DM    +    V  SS+L ACA +  LE G Q+H++ +K+    +  V N
Sbjct: 428 NGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGN 487

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           +L+ +YAKCG I DA  VFD +   D ++W A+I G + +G   EAL+ ++ ML    KP
Sbjct: 488 ALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKP 547

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           D +TFVG+L ACS+AGL +  + YF+SM + Y I+P  +HY CM+ LLGRSG L +A  L
Sbjct: 548 DKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKL 607

Query: 597 LDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
           + ++  EP   VW+ALLSAC +H D+ELG  +A  + E+EP +   +V LSN+Y+ A +W
Sbjct: 608 VHEIPFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRW 667

Query: 657 EDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA 716
            + A +R  MK +GIRKEPG SW+E   +VH F   D  HP    I   ++ + +  +  
Sbjct: 668 GNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTKLINGMLEWLNMKARNE 727

Query: 717 GYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAM 776
           GYVPD +  L +VE+  KE  L  HSE+LA+A+GL+  P  +P+RI KNLR+C DCH A+
Sbjct: 728 GYVPDFSSVLLDVEDVDKEQRLWVHSERLALAYGLIRTPSISPLRIIKNLRICADCHAAI 787

Query: 777 KYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           K IS +  R II+RD NRFHHF  G CSCGDYW
Sbjct: 788 KLISKIVQRDIIIRDMNRFHHFHEGICSCGDYW 820



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 159/523 (30%), Positives = 261/523 (49%), Gaps = 6/523 (1%)

Query: 134 YTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKM 193
           Y   ++L+ C   G    G+  H   IK    L+ F    L++ Y K   + +A  LF  
Sbjct: 45  YIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDE 104

Query: 194 FPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDF 253
            PD +N V++ T+I GYSQ     +AI  F  ++ EG E N F F ++L    +      
Sbjct: 105 MPD-RNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKL 163

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           G  VH C+   GF+++ +V +ALID Y+ CG  + AR++ +  E  + VSW  M+  +  
Sbjct: 164 GFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVE 223

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
               +E+L LF +M     K ++FT+ SVL         N  K+VH    KT +    FV
Sbjct: 224 NECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFV 283

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
              LID+Y K G++D A  VF  M   DVI W+ +I   A     EEA++ F  MR   +
Sbjct: 284 GVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLV 343

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
            P+   ++S+L ACA L  L+ G Q+H   +K G   ++ V N+L+ +YAKCG + ++ +
Sbjct: 344 LPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQ 403

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH-AG 552
           +F        ++W  +I+G  Q G G++AL  +  ML    +   +T+  +L AC+  A 
Sbjct: 404 LFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAA 463

Query: 553 LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
           L   ++ +  S+  +Y       +   +ID+  + G + +A+ + D M+ E D   W A+
Sbjct: 464 LEPGSQIHSLSVKTIYDKNTVVGN--ALIDMYAKCGNIKDARLVFD-MLREHDQVSWNAM 520

Query: 613 LSACRVHGDLELGERAANNLFELE-PMNAMPYVQLSNMYSTAG 654
           +S   VHG      +   ++ E E   + + +V + +  S AG
Sbjct: 521 ISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAG 563



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/408 (31%), Positives = 212/408 (51%), Gaps = 41/408 (10%)

Query: 43  LVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTW 101
           L+D +  SG++D+A Q+FE+M   D   W+ MIA YA S +                   
Sbjct: 287 LIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSE----------------- 329

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIK 161
                         EA E+F +M+     P+Q+TL ++L+ C+    LQ G Q H + +K
Sbjct: 330 --------------EAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVK 375

Query: 162 TCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIE 221
              D+N FV   L+DMYAKC  +  +  LF   P+  + V+W T+I GY Q G G KA+ 
Sbjct: 376 VGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTD-VSWNTVIVGYVQAGNGEKALI 434

Query: 222 CFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYA 281
            F+DM    V+  + T+ S+L ACA ++A + G+Q+H   + + ++ N  V +ALIDMYA
Sbjct: 435 LFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYA 494

Query: 282 KCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPS 341
           KCG++  AR + +     ++VSWN+MI G++  G + EAL  F+ M   + K D  T+  
Sbjct: 495 KCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVG 554

Query: 342 VLNCFASNIDLNNAKS-VHSLIVKTGFEGYKFVNNALIDMYAKQGNLD-CAFMVFNLMQD 399
           +L+  ++   L+  ++   S++ +   E        ++ +  + G+LD  A +V  +  +
Sbjct: 555 ILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFE 614

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD----HVVVSSI 443
             V+ W +L++ C  H   E  L   S  R+  I P+    HV++S+I
Sbjct: 615 PSVMVWRALLSACVIHNDVE--LGRISAQRVLEIEPEDEATHVLLSNI 660



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 165/318 (51%)

Query: 232 ESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR 291
           E N + + S+L +C        G  +H  I+  G   +++  + L++ Y K   L  A +
Sbjct: 41  EFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAK 100

Query: 292 LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID 351
           L +     N VS+ ++I G+++     EA+ LF ++     +++ F + +VL    S   
Sbjct: 101 LFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEW 160

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
                SVH+ + K GF+   FV  ALID Y+  G  +CA  VF+ ++ KD++SWT ++  
Sbjct: 161 AKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVAC 220

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
              +  +EE+LK FS MRI G  P++   +S+L AC  L V   G+ VH    K+     
Sbjct: 221 YVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEE 280

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
           L V   L+ +Y K G ++DA +VF+ M   DVI W+ +I   AQ+ + +EA++ + +M  
Sbjct: 281 LFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRR 340

Query: 532 RGTKPDYITFVGLLFACS 549
               P+  T   LL AC+
Sbjct: 341 GLVLPNQFTLASLLQACA 358



 Score = 45.8 bits (107), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 61/152 (40%), Gaps = 43/152 (28%)

Query: 22  PARYTHNVGNSVKPASDLN----RALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAA 76
           P    H++  SVK   D N     AL+D ++  G I +A  +F+ + + D  +WN MI+ 
Sbjct: 466 PGSQIHSL--SVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMIS- 522

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
                                         GYS +GL  EA + F  M     +P + T 
Sbjct: 523 ------------------------------GYSVHGLYGEALKTFESMLETECKPDKVTF 552

Query: 137 DNVLRLCSLKGLLQRGEQF-----HGYAIKTC 163
             +L  CS  GLL RG+ +       Y I+ C
Sbjct: 553 VGILSACSNAGLLDRGQAYFKSMVEEYDIEPC 584


>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
 gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 282/675 (41%), Positives = 413/675 (61%), Gaps = 33/675 (4%)

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
           N F    L+  Y+K   + + + +F   P+  + V+W ++++GY+ NG   +++  +  M
Sbjct: 70  NLFSWNTLLSAYSKLGYLQDMQRVFDSMPN-HDVVSWNSLLSGYAGNGLISESVRVYNMM 128

Query: 227 RVEG-VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
             +G V  N+ TF ++L   +     D G Q+HG I   G+++ ++V S L+DMYAK G 
Sbjct: 129 LKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGF 188

Query: 286 LDSARRLLE---------YSEI-----------------DN-----EVSWNSMIVGFARQ 314
           ++ A R+ E         Y+ +                 DN      +SW ++I G  + 
Sbjct: 189 INDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQN 248

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
           G  KEA+  FK+M      +D FT+ SVL      + L+  K +H+ I++T ++   FV 
Sbjct: 249 GLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVG 308

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           +AL+DMY K  N+  A  VF  M+ K+VISWT+++ G   +G  EEA++ F DM+ + I 
Sbjct: 309 SALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIH 368

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           PD   + S++S+CA L  LE G Q H   L SG    ++V N+L+ +Y KCG +  A+++
Sbjct: 369 PDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQL 428

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
           F  M  RD ++WTAL+ G AQ GK  E +  ++ MLA G  PD +TFVG+L ACS AGL 
Sbjct: 429 FHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLV 488

Query: 555 ENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
           E    YFE M K + I P PDHY CMIDLL R+G+L EAK  ++QM   PDA  W  LLS
Sbjct: 489 EKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLS 548

Query: 615 ACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
           +CR++G+LE+G+ AA +L +LEP N   Y+ LS++Y+  GKW+D A++RK M+  G++KE
Sbjct: 549 SCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKE 608

Query: 675 PGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGK 734
           PG SW++  ++VHIF ++DR  P    IY+K++ + L + E GYVPDM+F LH+VE+  K
Sbjct: 609 PGHSWIKYKNKVHIFSADDRSSPFSDQIYAKLESLYLKMIEEGYVPDMSFVLHDVEKSEK 668

Query: 735 EIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNR 794
              L +HSEKLA+AFGLL +P G  IR+ KNLRVCGDCH A KYIS +  R I++RD+ R
Sbjct: 669 IKMLNHHSEKLAIAFGLLFIPDGLQIRVVKNLRVCGDCHNATKYISRITQREILVRDAVR 728

Query: 795 FHHFKAGNCSCGDYW 809
           FH FK G CSCGD+W
Sbjct: 729 FHLFKDGVCSCGDFW 743



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 179/594 (30%), Positives = 292/594 (49%), Gaps = 70/594 (11%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  +   G++  A  +F+ +   + F+WNT+++AY+  G L++ +++F+  P  +  
Sbjct: 44  NNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVV 103

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
           +W+SL+ GY+  GL  E+  ++  M  +G    ++ T   +L L S +G +  G Q HG 
Sbjct: 104 SWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQ 163

Query: 159 AIKTCFDLNAFVVTGLVDMYAK-------------------------------CKCIFEA 187
             K  +    FV + LVDMYAK                               C+ I EA
Sbjct: 164 IFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEA 223

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
           E LF   P+ K+ ++WTT+ITG +QNG   +A++ F++M +EG   +QFTF S+LTAC  
Sbjct: 224 EQLFDNMPE-KDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGG 282

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
             A D G Q+H  I+ + ++ N++V SAL+DMY KC ++  A  +       N +SW +M
Sbjct: 283 FLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAM 342

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           +VG+ + G+ +EA+ +F  M   +I  DDFT  SV++  A+   L      H   + +G 
Sbjct: 343 LVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGL 402

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
             +  V+NALI +Y K G+L+ A  +F+ M+ +D +SWT+L++G A  G   E +  F  
Sbjct: 403 ICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFET 462

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           M   GI PD V    +LSAC+   ++E G                         Y    C
Sbjct: 463 MLAHGIVPDGVTFVGVLSACSRAGLVEKG-------------------------YHYFEC 497

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           +   +R+     T     +T +I   ++ G+ +EA  F +QM      PD I +  LL +
Sbjct: 498 MVKEHRI-----TPIPDHYTCMIDLLSRAGRLEEAKNFINQM---PFSPDAIGWATLLSS 549

Query: 548 CSHAGLAENARWYFESMDKVYGIKP-GPDHYACMIDLLGRSGKLIEAKALLDQM 600
           C   G  E  +W  ES+ K   ++P  P  Y  +  +    GK  +   L   M
Sbjct: 550 CRLNGNLEIGKWAAESLHK---LEPQNPASYILLSSIYAAKGKWDDVAKLRKGM 600



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 130/529 (24%), Positives = 237/529 (44%), Gaps = 108/529 (20%)

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
           SN +T  + L  C     R    ++H  I+ +      ++ + LI+ Y K GDL +AR +
Sbjct: 5   SNYYT--AALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNV 62

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN--- 349
            ++    N  SWN+++  +++ G+ ++   +F  M   D+     ++ S+L+ +A N   
Sbjct: 63  FDHIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDV----VSWNSLLSGYAGNGLI 118

Query: 350 ---------------IDLNN------------------AKSVHSLIVKTGFEGYKFVNNA 376
                          ++LN                    + +H  I K G++ Y FV + 
Sbjct: 119 SESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSP 178

Query: 377 LIDMYAKQGNLD--------------------------CAFMV-----FNLMQDKDVISW 405
           L+DMYAK G ++                          C F+V     F+ M +KD ISW
Sbjct: 179 LVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISW 238

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
           T++ITG   +G ++EA+  F +M I G C D     S+L+AC     L+ G+Q+HA  ++
Sbjct: 239 TTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIR 298

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
           +    ++ V ++L+ +Y KC  +  A  VF  M  ++VI+WTA+++G  QNG  +EA++ 
Sbjct: 299 TDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRI 358

Query: 526 YDQMLARGTKPDYITFVGLLFACSH-AGLAENARWYFESMDK--------------VYGI 570
           +  M      PD  T   ++ +C++ A L E A+++ +++                +YG 
Sbjct: 359 FCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGK 418

Query: 571 KPGPDH---------------YACMIDLLGRSGKLIEAKALLDQMVGE---PDATVWKAL 612
               +H               +  ++    + GK  E  +L + M+     PD   +  +
Sbjct: 419 CGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGV 478

Query: 613 LSACRVHGDLELGERAANNLFELEPMNAMP--YVQLSNMYSTAGKWEDA 659
           LSAC   G +E G      + +   +  +P  Y  + ++ S AG+ E+A
Sbjct: 479 LSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEA 527


>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
          Length = 865

 Score =  550 bits (1417), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 312/857 (36%), Positives = 483/857 (56%), Gaps = 78/857 (9%)

Query: 20  IGPARYTHNVGNSVKPASDL---NRALVDFSNSGEIDEAGQLFEK-MSDRDGFTWNTMIA 75
           +  AR  H    +V  AS +   N  L  + + G + +A +L    + + +  T N M+ 
Sbjct: 20  LAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPNVITHNIMMN 79

Query: 76  AYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQY 134
            YA  G L +A++LF+  P ++  +W++L+ GY      ++  E F  M   G   P+ +
Sbjct: 80  GYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAF 139

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
           T   V++ C   G  +   Q  G   K  F  +  V T LVDM+ +C  +  A  LF   
Sbjct: 140 TFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQI 199

Query: 195 PD-----------------GKNH-------------VAWTTMITGYSQNGYGFKAIECFR 224
                              G +H             V+W  MI   SQ+G   +A+    
Sbjct: 200 ERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVV 259

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
           +M  +GV  +  T+ S LTACA + +  +G Q+H  ++ S  + + YV SALI++YAKCG
Sbjct: 260 EMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCG 319

Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
               A+R+    +  N VSW  +I G  +     +++ LF +M A  + ID F   ++++
Sbjct: 320 SFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLIS 379

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
              + +DL   + +HSL +K+G      V+N+LI +YAK G+L  A  VF+ M ++D++S
Sbjct: 380 GCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVS 439

Query: 405 WTSLITG-----------------------------CAY--HGSYEEALKYFSDM-RISG 432
           WTS+IT                               AY  HG+ E+ LK +S M     
Sbjct: 440 WTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKD 499

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
           + PD V   ++   CA++   + G Q+    +K+G   ++SV N+ + +Y+KCG I++A 
Sbjct: 500 VTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQ 559

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
           ++FD ++ +DV++W A+I G +Q+G GK+A + +D ML++G KPDYI++V +L  CSH+G
Sbjct: 560 KLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSG 619

Query: 553 LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
           L +  + YF+ M +V+GI PG +H++CM+DLLGR+G L EAK L+D+M  +P A VW AL
Sbjct: 620 LVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGAL 679

Query: 613 LSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIR 672
           LSAC++HG+ EL E AA ++FEL+  ++  Y+ L+ +YS AGK +D+A+VRKLM+ +GI+
Sbjct: 680 LSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIK 739

Query: 673 KEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEE 732
           K PG SW+E  ++VH+F ++D  HP    I +K+DE+M  I   GYV          E  
Sbjct: 740 KNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDELMEKIAHLGYV--------RTESP 791

Query: 733 GKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDS 792
             EI   +HSEKLAVAFG+++LP   PI I KNLR+CGDCHT +K IS+V  R  ++RD 
Sbjct: 792 RSEI---HHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDG 848

Query: 793 NRFHHFKAGNCSCGDYW 809
            RFHHFK+G+CSCGDYW
Sbjct: 849 VRFHHFKSGSCSCGDYW 865



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 158/602 (26%), Positives = 265/602 (44%), Gaps = 100/602 (16%)

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
           L + LR C  +G L      HG  +        F+   L+  Y  C  + +A  L +   
Sbjct: 7   LADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADI 66

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMR--------------------VEGVES-- 233
              N +    M+ GY++ G    A E F  M                     ++G+E+  
Sbjct: 67  KEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFV 126

Query: 234 ----------NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
                     N FTF  ++ +C A+  R+   Q+ G      F  +  V++AL+DM+ +C
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC 186

Query: 284 GDLDSARRL----------------------------LEYSEIDNE---VSWNSMIVGFA 312
           G +D A RL                            +EY E   E   VSWN MI   +
Sbjct: 187 GYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALS 246

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
           + G  +EAL L  +MH + +++D  TY S L   A    L   K +H+ ++++  +   +
Sbjct: 247 QSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPY 306

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           V +ALI++YAK G+   A  VFN +QD++ +SWT LI G   +  + ++++ F+ MR   
Sbjct: 307 VASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAEL 366

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
           +  D   +++++S C     L  G+Q+H++ LKSG   ++ V NSL+ +YAKCG + +A 
Sbjct: 367 MAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAE 426

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG------------------- 533
            VF SM  RD+++WT++I   +Q G   +A +F+D M  R                    
Sbjct: 427 FVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEED 486

Query: 534 -------------TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACM 580
                          PD++T+V L   C+  G  +          K  G+          
Sbjct: 487 GLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKA-GLILNVSVANAA 545

Query: 581 IDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNA 640
           I +  + G++ EA+ L D + G+ D   W A+++    HG   +G++AA    ++    A
Sbjct: 546 ITMYSKCGRISEAQKLFDLLNGK-DVVSWNAMITGYSQHG---MGKQAAKTFDDMLSKGA 601

Query: 641 MP 642
            P
Sbjct: 602 KP 603


>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
 gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
          Length = 704

 Score =  550 bits (1417), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 291/706 (41%), Positives = 426/706 (60%), Gaps = 2/706 (0%)

Query: 104 LIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC 163
           ++ GY+       A   F +M+ +  RP  Y    +L+LC     L+RG++ HG  I + 
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
           F  N F +TG+V+MYAKC+ I +A  +F   P+ ++ V W TMI+GY+QNG+   A+   
Sbjct: 61  FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPE-RDLVCWNTMISGYAQNGFAKVALMLV 119

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
             M  EG   +  T  SIL A A       G  VHG +L +GFE+ V V +AL+DMY+KC
Sbjct: 120 LRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKC 179

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
           G +  AR + +  +    VSWNSMI G+ + G  + A+ +F+KM    ++  + T    L
Sbjct: 180 GSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGAL 239

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVI 403
           +  A   DL   K VH L+ +   +    V N+LI MY+K   +D A  +F  +++K ++
Sbjct: 240 HACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLV 299

Query: 404 SWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVF 463
           SW ++I G A +G   EAL  F +M+   I PD   + S++ A AEL++    + +H + 
Sbjct: 300 SWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLV 359

Query: 464 LKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEAL 523
           ++     ++ V  +LV +YAKCG I+ A ++FD M+ R VITW A+I G   +G GK ++
Sbjct: 360 IRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSV 419

Query: 524 QFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDL 583
           + + +M     KP+ ITF+  L ACSH+GL E    +FESM K YGI+P  DHY  M+DL
Sbjct: 420 ELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDL 479

Query: 584 LGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPY 643
           LGR+G+L +A   + +M  +P  TV+ A+L AC++H +++LGE+AA  +F+L P +   +
Sbjct: 480 LGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYH 539

Query: 644 VQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIY 703
           V L+N+Y+TA  W   A+VR +M+  G++K PGCS VE  ++VH F S    HP    IY
Sbjct: 540 VLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIY 599

Query: 704 SKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIF 763
           S ++ ++  I+ AGYVPD N ++H+VE++ K   L  HSEKLA+AFGLL    G PI I 
Sbjct: 600 SYLETLVDEIRAAGYVPDTN-SIHDVEDDVKVQLLNTHSEKLAIAFGLLNTSTGTPIHIR 658

Query: 764 KNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           KNLRVCGDCH A KYIS V  R II+RD +RFH FK G CSCGDYW
Sbjct: 659 KNLRVCGDCHNATKYISLVTGREIIVRDMHRFHLFKDGVCSCGDYW 704



 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 143/458 (31%), Positives = 234/458 (51%), Gaps = 13/458 (2%)

Query: 67  GFTWNT-----MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELF 121
           GF+WN      ++  YA   ++ +A  +F+  P ++   W+++I GY+  G    A  L 
Sbjct: 60  GFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLV 119

Query: 122 WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
            +M  EG+RP   T+ ++L   +   LL+ G   HGY ++  F+    V T LVDMY+KC
Sbjct: 120 LRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKC 179

Query: 182 KCIFEAEYLFKMFPDGKNH---VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTF 238
             +  A  +F    DG +H   V+W +MI GY Q+G    A+  F+ M  EGV+    T 
Sbjct: 180 GSVSIARVIF----DGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTV 235

Query: 239 PSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI 298
              L ACA +   + G  VH  +     +++V V ++LI MY+KC  +D A  + +    
Sbjct: 236 MGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRN 295

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
              VSWN+MI+G+A+ G   EAL+ F +M +R+IK D FT  SV+   A       AK +
Sbjct: 296 KTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWI 355

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           H L+++   +   FV  AL+DMYAK G +  A  +F++M  + VI+W ++I G   HG  
Sbjct: 356 HGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLG 415

Query: 419 EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNS 477
           + +++ F +M+   I P+ +     LSAC+   ++E G        K  G   ++    +
Sbjct: 416 KTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGA 475

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
           +V +  + G +N A      M  +  IT    ++G  +
Sbjct: 476 MVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACK 513



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 153/333 (45%), Gaps = 31/333 (9%)

Query: 54  EAGQLFEKMSDR-----DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY 108
           E G+   K+ D+     D    N++I+ Y+   R+  A  +F     K   +W+++I GY
Sbjct: 249 ERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGY 308

Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA 168
           +  G   EA   F +MQ    +P  +T+ +V+   +   + ++ +  HG  I+   D N 
Sbjct: 309 AQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNV 368

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
           FV+T LVDMYAKC  I  A  LF M  + ++ + W  MI GY  +G G  ++E F++M+ 
Sbjct: 369 FVMTALVDMYAKCGAIHTARKLFDMM-NARHVITWNAMIDGYGTHGLGKTSVELFKEMKK 427

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-----GFEANVYVQSALIDMYAKC 283
             ++ N  TF   L+AC+     + G     C   S     G E  +    A++D+  + 
Sbjct: 428 GTIKPNDITFLCALSACSHSGLVEEGL----CFFESMKKDYGIEPTMDHYGAMVDLLGRA 483

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKE-------ALSLFKKMHARDIKIDD 336
           G L+ A   ++   I   ++    ++G  +   HK        A  +FK      +  DD
Sbjct: 484 GRLNQAWDFIQKMPIKPGITVYGAMLGACK--IHKNVDLGEKAAFEIFK------LNPDD 535

Query: 337 FTYPSVL-NCFASNIDLNNAKSVHSLIVKTGFE 368
             Y  +L N +A+         V +++ K+G +
Sbjct: 536 GGYHVLLANIYATASMWGKVAKVRTIMEKSGLQ 568



 Score = 42.7 bits (99), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 54/119 (45%), Gaps = 9/119 (7%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE----TPFK 96
           ALVD ++  G I  A +LF+ M+ R   TWN MI  Y   G  + + +LF E    T   
Sbjct: 373 ALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKP 432

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQ 154
           N  T+   +   S+ GL  E    F  M+ + G  P   T+D+   +  L G   R  Q
Sbjct: 433 NDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEP---TMDHYGAMVDLLGRAGRLNQ 488


>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
          Length = 865

 Score =  550 bits (1416), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 312/857 (36%), Positives = 483/857 (56%), Gaps = 78/857 (9%)

Query: 20  IGPARYTHNVGNSVKPASDL---NRALVDFSNSGEIDEAGQLFEK-MSDRDGFTWNTMIA 75
           +  AR  H    +V  AS +   N  L  + + G + +A +L    + + +  T N M+ 
Sbjct: 20  LAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMN 79

Query: 76  AYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQY 134
            YA  G L +A++LF+  P ++  +W++L+ GY      ++  E F  M   G   P+ +
Sbjct: 80  GYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAF 139

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
           T   V++ C   G  +   Q  G   K  F  +  V T LVDM+ +C  +  A  LF   
Sbjct: 140 TFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQI 199

Query: 195 PD-----------------GKNH-------------VAWTTMITGYSQNGYGFKAIECFR 224
                              G +H             V+W  MI   SQ+G   +A+    
Sbjct: 200 ERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVV 259

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
           +M  +GV  +  T+ S LTACA + +  +G Q+H  ++ S  + + YV SALI++YAKCG
Sbjct: 260 EMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCG 319

Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
               A+R+    +  N VSW  +I G  +     +++ LF +M A  + ID F   ++++
Sbjct: 320 SFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLIS 379

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
              + +DL   + +HSL +K+G      V+N+LI +YAK G+L  A  VF+ M ++D++S
Sbjct: 380 GCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVS 439

Query: 405 WTSLITG-----------------------------CAY--HGSYEEALKYFSDM-RISG 432
           WTS+IT                               AY  HG+ E+ LK +S M     
Sbjct: 440 WTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKD 499

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
           + PD V   ++   CA++   + G Q+    +K+G   ++SV N+ + +Y+KCG I++A 
Sbjct: 500 VTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQ 559

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
           ++FD ++ +DV++W A+I G +Q+G GK+A + +D ML++G KPDYI++V +L  CSH+G
Sbjct: 560 KLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSG 619

Query: 553 LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
           L +  + YF+ M +V+GI PG +H++CM+DLLGR+G L EAK L+D+M  +P A VW AL
Sbjct: 620 LVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGAL 679

Query: 613 LSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIR 672
           LSAC++HG+ EL E AA ++FEL+  ++  Y+ L+ +YS AGK +D+A+VRKLM+ +GI+
Sbjct: 680 LSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIK 739

Query: 673 KEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEE 732
           K PG SW+E  ++VH+F ++D  HP    I +K+DE+M  I   GYV          E  
Sbjct: 740 KNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYV--------RTESP 791

Query: 733 GKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDS 792
             EI   +HSEKLAVAFG+++LP   PI I KNLR+CGDCHT +K IS+V  R  ++RD 
Sbjct: 792 RSEI---HHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDG 848

Query: 793 NRFHHFKAGNCSCGDYW 809
            RFHHFK+G+CSCGDYW
Sbjct: 849 VRFHHFKSGSCSCGDYW 865



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 158/602 (26%), Positives = 265/602 (44%), Gaps = 100/602 (16%)

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
           L + LR C  +G L      HG  +        F+   L+  Y  C  + +A  L +   
Sbjct: 7   LADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADI 66

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMR--------------------VEGVES-- 233
              N +    M+ GY++ G    A E F  M                     ++G+E+  
Sbjct: 67  KEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFV 126

Query: 234 ----------NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
                     N FTF  ++ +C A+  R+   Q+ G      F  +  V++AL+DM+ +C
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC 186

Query: 284 GDLDSARRL----------------------------LEYSEIDNE---VSWNSMIVGFA 312
           G +D A RL                            +EY E   E   VSWN MI   +
Sbjct: 187 GYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALS 246

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
           + G  +EAL L  +MH + +++D  TY S L   A    L   K +H+ ++++  +   +
Sbjct: 247 QSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPY 306

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           V +ALI++YAK G+   A  VFN +QD++ +SWT LI G   +  + ++++ F+ MR   
Sbjct: 307 VASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAEL 366

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
           +  D   +++++S C     L  G+Q+H++ LKSG   ++ V NSL+ +YAKCG + +A 
Sbjct: 367 MAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAE 426

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG------------------- 533
            VF SM  RD+++WT++I   +Q G   +A +F+D M  R                    
Sbjct: 427 FVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEED 486

Query: 534 -------------TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACM 580
                          PD++T+V L   C+  G  +          K  G+          
Sbjct: 487 GLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKA-GLILNVSVANAA 545

Query: 581 IDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNA 640
           I +  + G++ EA+ L D + G+ D   W A+++    HG   +G++AA    ++    A
Sbjct: 546 ITMYSKCGRISEAQKLFDLLNGK-DVVSWNAMITGYSQHG---MGKQAAKTFDDMLSKGA 601

Query: 641 MP 642
            P
Sbjct: 602 KP 603


>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  550 bits (1416), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 281/707 (39%), Positives = 419/707 (59%), Gaps = 3/707 (0%)

Query: 104 LIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC 163
           ++ G++  G  I  F  F ++   G RP  YTL  V+R C     LQ G   H    K  
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
            DL+ FV   LVDMY KC+ I +A +LF    + ++ V WT MI GY++ G   +++  F
Sbjct: 61  LDLDHFVCAALVDMYVKCREIEDARFLFDKMQE-RDLVTWTVMIGGYAECGKANESLVLF 119

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
             MR EGV  ++    +++ ACA + A      +   I    F+ +V + +A+IDMYAKC
Sbjct: 120 EKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKC 179

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
           G ++SAR + +  E  N +SW++MI  +   G  ++AL LF+ M +  +  D  T  S+L
Sbjct: 180 GCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLL 239

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVI 403
              +   +L   + +H ++ K G +   FV  AL+DMY K   ++ A  +F+ M ++D++
Sbjct: 240 YACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLV 299

Query: 404 SWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVF 463
           +WT +I G A  G+  E+L  F  MR  G+ PD V + +++ ACA+L  +   + +    
Sbjct: 300 TWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYI 359

Query: 464 LKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEAL 523
            +      + +  +++ ++AKCGC+  A  +FD M  ++VI+W+A+I     +G+G++AL
Sbjct: 360 QRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKAL 419

Query: 524 QFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDL 583
             +  ML  G  P+ IT V LL+ACSHAGL E    +F  M + Y ++    HY C++DL
Sbjct: 420 DLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDL 479

Query: 584 LGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPY 643
           LGR+G+L EA  L++ M  E D  +W A L ACR H D+ L E+AA +L EL+P N   Y
Sbjct: 480 LGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHY 539

Query: 644 VQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIY 703
           + LSN+Y+ AG+WED A+ R LM  R ++K PG +W+E +++ H F   D  HP   +IY
Sbjct: 540 ILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIY 599

Query: 704 SKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAY-HSEKLAVAFGLLTLPQGAPIRI 762
             +  +   ++  GYVPD NF LH+V+EE K IG+ Y HSEKLA+AFGL+  P+  PIRI
Sbjct: 600 EMLKSLGNKLELVGYVPDTNFVLHDVDEELK-IGILYSHSEKLAIAFGLIATPEHTPIRI 658

Query: 763 FKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            KNLRVCGDCHT  K +SA+  R II+RD+NRFHHFK G CSCGDYW
Sbjct: 659 IKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 705



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 235/455 (51%), Gaps = 9/455 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D F    ++  Y     + +A+ LF++   ++  TW+ +I GY+  G   E+  LF +
Sbjct: 62  DLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEK 121

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+ EG  P +  +  V+  C+  G + +      Y  +  F L+  + T ++DMYAKC C
Sbjct: 122 MREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGC 181

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +  A  +F    + KN ++W+ MI  Y  +G G KA++ FR M   G+  ++ T  S+L 
Sbjct: 182 VESAREIFDRMEE-KNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC+ +     G  +H  +   G + + +V +AL+DMY KC +++ AR L +     + V+
Sbjct: 241 ACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVT 300

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           W  MI G+A  G   E+L LF KM    +  D     +V+   A    ++ A+++   I 
Sbjct: 301 WTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQ 360

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           +  F+    +  A+IDM+AK G ++ A  +F+ M++K+VISW+++I    YHG   +AL 
Sbjct: 361 RKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALD 420

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD----NSLV 479
            F  M  SGI P+ + + S+L AC+   ++E G +  ++  +     S+  D      +V
Sbjct: 421 LFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWED---YSVRADVKHYTCVV 477

Query: 480 LVYAKCGCINDANRVFDSMHT-RDVITWTALIMGC 513
            +  + G +++A ++ +SM   +D   W A +  C
Sbjct: 478 DLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGAC 512



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 173/351 (49%), Gaps = 11/351 (3%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
             MI  YA  G +  A+++F+    KN  +WS++I  Y  +G   +A +LF  M   G  
Sbjct: 170 TAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGML 229

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P + TL ++L  CS    LQ G   H    K   DL+ FV   LVDMY KC+ I +A +L
Sbjct: 230 PDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFL 289

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P+ ++ V WT MI GY++ G   +++  F  MR EGV  ++    +++ ACA + A
Sbjct: 290 FDKMPE-RDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGA 348

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
                 +   I    F+ +V + +A+IDM+AKCG ++SAR + +  E  N +SW++MI  
Sbjct: 349 MHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAA 408

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI-----VKT 365
           +   G  ++AL LF  M    I  +  T  S+L   +    +       SL+     V+ 
Sbjct: 409 YGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRA 468

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYH 415
             + Y  V    +D+  + G LD A  +   M  +KD   W + +  C  H
Sbjct: 469 DVKHYTCV----VDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTH 515



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 126/259 (48%), Gaps = 4/259 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D F    ++  Y     + +A+ LF++ P ++  TW+ +I GY+  G   E+  LF +
Sbjct: 264 DLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDK 323

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+ EG  P +  +  V+  C+  G + +      Y  +  F L+  + T ++DM+AKC C
Sbjct: 324 MREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGC 383

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +  A  +F    + KN ++W+ MI  Y  +G G KA++ F  M   G+  N+ T  S+L 
Sbjct: 384 VESAREIFDRMEE-KNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLY 442

Query: 244 ACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           AC+     + G +    +       A+V   + ++D+  + G LD A +L+E   ++ + 
Sbjct: 443 ACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDE 502

Query: 303 SWNSMIVGFARQGFHKEAL 321
                 +G  R   HK+ +
Sbjct: 503 GLWGAFLGACRT--HKDVV 519



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 8/93 (8%)

Query: 39  LNRALVDF-SNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF----NET 93
           L  A++D  +  G ++ A ++F++M +++  +W+ MIAAY   G+ R+A  LF       
Sbjct: 370 LGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSG 429

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEA---FELFWQ 123
              N  T  SL+Y  S+ GL  E    F L W+
Sbjct: 430 ILPNKITLVSLLYACSHAGLVEEGLRFFSLMWE 462


>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
 gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  549 bits (1415), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 289/745 (38%), Positives = 436/745 (58%), Gaps = 2/745 (0%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           ++ F    +++ +   G + EA ++F     K    + +++ G++      +A + F +M
Sbjct: 67  QEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRM 126

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
           + +   P  Y    +L++C  +  L+ G++ HG  +K+ F L+ F +TGL +MYAKC+ +
Sbjct: 127 RYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQV 186

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            EA  +F   P+ ++ V+W T++ GYSQNG    A+E  + M  E ++ +  T  S+L A
Sbjct: 187 NEARKVFDRMPE-RDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPA 245

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
            +A+     G ++HG  + SGF++ V + +AL+DMYAKCG L++AR+L +     N VSW
Sbjct: 246 VSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSW 305

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           NSMI  + +    KEA+ +F+KM    +K  D +    L+  A   DL   + +H L V+
Sbjct: 306 NSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE 365

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            G +    V N+LI MY K   +D A  +F  +Q + ++SW ++I G A +G   +AL Y
Sbjct: 366 LGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNY 425

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           FS MR   + PD     S+++A AEL++    + +H V ++S    ++ V  +LV +YAK
Sbjct: 426 FSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAK 485

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG I  A  +FD M  R V TW A+I G   +G GK AL+ +++M     KP+ +TF+ +
Sbjct: 486 CGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSV 545

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           + ACSH+GL E     F  M + Y I+   DHY  M+DLLGR+G+L EA   + QM  +P
Sbjct: 546 ISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKP 605

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
              V+ A+L AC++H ++   E+AA  LFEL P +   +V L+N+Y  A  WE   +VR 
Sbjct: 606 AVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRV 665

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
            M  +G+RK PGCS VE  ++VH F S    HP    IY+ +++++  IKEAGYVPD N 
Sbjct: 666 SMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNL 725

Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
            L  VE + KE  L+ HSEKLA++FGLL    G  I + KNLRVC DCH A KYIS V  
Sbjct: 726 VL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTG 784

Query: 785 RHIILRDSNRFHHFKAGNCSCGDYW 809
           R I++RD  RFHHFK G CSCGDYW
Sbjct: 785 REIVVRDMQRFHHFKNGACSCGDYW 809



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 173/329 (52%), Gaps = 1/329 (0%)

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           + +N +  P+ L      S ++   Q+   +  +G     + Q+ L+ ++ + G +D A 
Sbjct: 31  IPANVYEHPAALLLERCSSLKEL-RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAA 89

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
           R+ E  +    V +++M+ GFA+     +AL  F +M   D++   + +  +L       
Sbjct: 90  RVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEA 149

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           +L   K +H L+VK+GF    F    L +MYAK   ++ A  VF+ M ++D++SW +++ 
Sbjct: 150 ELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVA 209

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
           G + +G    AL+    M    + P  + + S+L A + L ++  G+++H   ++SG  S
Sbjct: 210 GYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDS 269

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
            +++  +LV +YAKCG +  A ++FD M  R+V++W ++I    QN   KEA+  + +ML
Sbjct: 270 LVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML 329

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARW 559
             G KP  ++ +G L AC+  G  E  R+
Sbjct: 330 DEGVKPTDVSVMGALHACADLGDLERGRF 358



 Score = 43.5 bits (101), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 5/92 (5%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE----T 93
           +  ALVD ++  G I  A  +F+ MS+R   TWN MI  Y   G  + A +LF E    T
Sbjct: 475 VTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGT 534

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
              N  T+ S+I   S+ GL     + F+ M+
Sbjct: 535 IKPNGVTFLSVISACSHSGLVEAGLKCFYMMK 566


>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
 gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
          Length = 721

 Score =  548 bits (1413), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 284/721 (39%), Positives = 424/721 (58%), Gaps = 1/721 (0%)

Query: 89  LFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL 148
           +F+E P +N  ++ +LI+GY+     IEAFELF ++  EG+  + +    VL+L      
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
            + G   HG  +K  +  N F+ T L+D Y+   C+  A  +F      K+ V+WT MI 
Sbjct: 62  AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEIS-SKDMVSWTGMIA 120

Query: 209 GYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEA 268
            Y++N    +A+E F  MRV G + N FTF  +L AC  +   D G  VH  +L + +E 
Sbjct: 121 SYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER 180

Query: 269 NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH 328
           ++YV   L+++Y +CGD D A R       ++ + W+ MI  FA+ G  ++AL +F +M 
Sbjct: 181 DLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMR 240

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD 388
              +  + FT+ SVL   A    L+ +K++H   +K G     FV+NAL+  YAK G ++
Sbjct: 241 RAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIE 300

Query: 389 CAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
            +  +F  + D++ +SW ++I      G  E AL  FS+M    +    V  SSIL ACA
Sbjct: 301 QSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACA 360

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
            L  LE G QVH +  K+     ++V N+L+ +YAKCG I DA  +FD +  RD ++W A
Sbjct: 361 TLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNA 420

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
           +I G + +G G EA++ ++ M     KPD +TFVG+L ACS+ G  +  + YF SM + Y
Sbjct: 421 IICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDY 480

Query: 569 GIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
           GI+P  +HY CM+ L+GRSG L +A   ++ +  EP   +W+ALL AC +H D+ELG  +
Sbjct: 481 GIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRIS 540

Query: 629 ANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHI 688
           A  + ELEP +   +V LSN+Y+ A +W + A VRK MK +G++KEPG SW+E    VH 
Sbjct: 541 AQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHC 600

Query: 689 FISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVA 748
           F   D  H     I   ++ + +  ++AGY P +N  L +VE++ KE  L  HSE+LA+A
Sbjct: 601 FTVADTSHADLKLINGMLEFLNMKTRKAGYSPQLNAVLLDVEDDEKERLLWLHSERLALA 660

Query: 749 FGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDY 808
           FGL+ +P G PIRI KNLR+C DCH+ +K IS +  R II+RD NRFHHF+ G+CSC DY
Sbjct: 661 FGLVRMPAGCPIRIIKNLRICVDCHSVIKLISKIVGRDIIVRDMNRFHHFENGSCSCADY 720

Query: 809 W 809
           W
Sbjct: 721 W 721



 Score =  235 bits (600), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 151/473 (31%), Positives = 247/473 (52%), Gaps = 10/473 (2%)

Query: 49  SGEIDEAGQLFEKMSDRDGFTWNT-----MIAAYANSGRLREAKKLFNETPFKNFFTWSS 103
           S E  E G++      + G+  NT     +I AY+ SG +  A+++F+E   K+  +W+ 
Sbjct: 58  SMEWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTG 117

Query: 104 LIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC 163
           +I  Y+      EA E F QM++ G++P+ +T   VL+ C        G+  H   +KT 
Sbjct: 118 MIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTN 177

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHV-AWTTMITGYSQNGYGFKAIEC 222
           ++ + +V  GL+++Y +C    +A   F   P  KN V  W+ MI+ ++Q+G   KA+E 
Sbjct: 178 YERDLYVGVGLLELYTRCGDNDDAWRAFGDMP--KNDVIPWSFMISRFAQSGQSEKALEI 235

Query: 223 FRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK 282
           F  MR   V  NQFTF S+L A A + + D    +HG  L +G   +V+V +AL+  YAK
Sbjct: 236 FCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAK 295

Query: 283 CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
           CG ++ +  L E     N+VSWN++IV + + G  + ALSLF  M    ++  + TY S+
Sbjct: 296 CGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSI 355

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV 402
           L   A+   L     VH L  KT +     V NALIDMYAK G++  A  +F+++  +D 
Sbjct: 356 LRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDK 415

Query: 403 ISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAV 462
           +SW ++I G + HG   EA+K F+ M+ +   PD +    +LSAC+    L+ G+Q    
Sbjct: 416 VSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTS 475

Query: 463 FLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDSM-HTRDVITWTALIMGC 513
             +  G    +     +V +  + G ++ A +  + +     V+ W AL+  C
Sbjct: 476 MKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGAC 528



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 117/386 (30%), Positives = 197/386 (51%), Gaps = 9/386 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           +RD +    ++  Y   G   +A + F + P  +   WS +I  ++  G   +A E+F Q
Sbjct: 179 ERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQ 238

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+     P+Q+T  +VL+  +    L   +  HG+A+K     + FV   L+  YAKC C
Sbjct: 239 MRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGC 298

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I ++  LF+   D +N V+W T+I  Y Q G G +A+  F +M    V++ + T+ SIL 
Sbjct: 299 IEQSMELFEALSD-RNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILR 357

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           ACA ++A + G QVH     + +  +V V +ALIDMYAKCG +  AR + +  ++ ++VS
Sbjct: 358 ACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVS 417

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS-VHSLI 362
           WN++I G++  G   EA+ +F  M     K D+ T+  VL+  ++   L+  K    S+ 
Sbjct: 418 WNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMK 477

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
              G E        ++ +  + GNLD A   + ++  +  V+ W +L+  C  H   E  
Sbjct: 478 QDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVE-- 535

Query: 422 LKYFSDMRISGICP----DHVVVSSI 443
           L   S  R+  + P     HV++S+I
Sbjct: 536 LGRISAQRVLELEPRDEASHVLLSNI 561



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 122/256 (47%), Gaps = 33/256 (12%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  ++  G I+++ +LFE +SDR+  +WNT+I +Y   G    A  LF+        
Sbjct: 287 NALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNM------ 340

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
                               L +Q+Q      ++ T  ++LR C+    L+ G Q H   
Sbjct: 341 --------------------LRYQVQ-----ATEVTYSSILRACATLAALELGLQVHCLT 375

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
            KT +  +  V   L+DMYAKC  I +A ++F M  D ++ V+W  +I GYS +G G +A
Sbjct: 376 AKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDML-DLRDKVSWNAIICGYSMHGLGVEA 434

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALID 278
           I+ F  M+    + ++ TF  +L+AC+     D G Q    +    G E  +   + ++ 
Sbjct: 435 IKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVW 494

Query: 279 MYAKCGDLDSARRLLE 294
           +  + G+LD A + +E
Sbjct: 495 LMGRSGNLDQAVKFIE 510



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 88/157 (56%)

Query: 392 MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELT 451
           MVF+ M +++ +S+ +LI G A    + EA + F+ +   G   +  V +++L     + 
Sbjct: 1   MVFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSME 60

Query: 452 VLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIM 511
             E G+ VH   LK G  S+  +  +L+  Y+  GC++ A  VFD + ++D+++WT +I 
Sbjct: 61  WAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIA 120

Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
             A+N    EAL+F+ QM   G KP+  TF G+L AC
Sbjct: 121 SYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKAC 157



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 37/133 (27%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           +  AL+D ++  G I +A  +F+ +  RD  +WN +I  Y                    
Sbjct: 386 VGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGY-------------------- 425

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF-- 155
                      S +GL +EA ++F  M+    +P + T   VL  CS  G L  G+Q+  
Sbjct: 426 -----------SMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFT 474

Query: 156 ---HGYAIKTCFD 165
                Y I+ C +
Sbjct: 475 SMKQDYGIEPCME 487


>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 281/744 (37%), Positives = 442/744 (59%), Gaps = 4/744 (0%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFK-NFFTWSSLIYGYSNYGLDIEAFELFWQMQL 126
           F  N+++  Y     L  A++LF+  P K +  +W+S+I  YS+ G  IEA  LF +MQ 
Sbjct: 252 FVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQK 311

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
               P+ YT    L+ C     +++G   H   +K+ + +N FV   L+ MYA+   + E
Sbjct: 312 ASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGE 371

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A  +F    D  + ++W +M++G+ QNG   +A++ + +MR  G + +     SI+ A A
Sbjct: 372 AANIFYNMDDW-DTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASA 430

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
                  G Q+H   + +G ++++ V ++L+DMYAK   +     + +     + VSW +
Sbjct: 431 RSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTT 490

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           +I G A+ G H  AL LF+++    I +D     S+L   +    +++ K +HS I++ G
Sbjct: 491 IIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKG 550

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
                 + N ++D+Y + GN+D A  +F L++ KDV+SWTS+I+   ++G   EAL+ F 
Sbjct: 551 LSDL-VLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFH 609

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
            M+ +G+ PD + + SILSA A L+ L+ G+++H   ++ G     S+ ++LV +YA+CG
Sbjct: 610 LMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCG 669

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
            +  +  VF+ +  +D++ WT++I     +G G+ A+  + +M      PD+I FV +L+
Sbjct: 670 TLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLY 729

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ACSH+GL    R + ESM   Y ++P P+HY C++DLLGR+  L EA   +  M  EP A
Sbjct: 730 ACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTA 789

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
            VW ALL AC++H + ELGE AA  L E++P N   YV +SN+Y+   +W+D   VR  M
Sbjct: 790 EVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRM 849

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIM-LLIKEAGYVPDMNFA 725
           K+ G++K PGCSW+E  ++VH F++ D+ HP   +IYSK+ +I   L KE GYV    F 
Sbjct: 850 KASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFV 909

Query: 726 LHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLR 785
           LHN +EE K   L  HSE+LA+A+G+LT P+GA +RI KNLRVCGDCH   K IS  + R
Sbjct: 910 LHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFFER 969

Query: 786 HIILRDSNRFHHFKAGNCSCGDYW 809
            +++RD+NRFHHFK G CSCGD W
Sbjct: 970 ELVMRDANRFHHFKGGVCSCGDVW 993



 Score =  295 bits (754), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 175/566 (30%), Positives = 302/566 (53%), Gaps = 7/566 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F    ++  Y   G L +A+KLF+  P K  FTW+++I  Y   G  + + EL+ +M++ 
Sbjct: 151 FLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVS 210

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G      T   +L+ C L    + G + HG AIK  +    FV   +V MY KC  +  A
Sbjct: 211 GIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGA 270

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             LF   P+ ++ V+W +MI+ YS NG   +A+  F +M+   +  N +TF + L AC  
Sbjct: 271 RQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACED 330

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
            S    G  +H  +L S +  NV+V +ALI MYA+ G +  A  +    +  + +SWNSM
Sbjct: 331 SSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSM 390

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           + GF + G + EAL  + +M     K D     S++   A + +  N   +H+  +K G 
Sbjct: 391 LSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGL 450

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
           +    V N+L+DMYAK  ++     +F+ M DKDV+SWT++I G A +GS+  AL+ F +
Sbjct: 451 DSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFRE 510

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           +++ GI  D +++SSIL AC+ L ++   +++H+  ++  G S L + N +V VY +CG 
Sbjct: 511 VQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRK-GLSDLVLQNGIVDVYGECGN 569

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           ++ A R+F+ +  +DV++WT++I     NG   EAL+ +  M   G +PD I+ V +L A
Sbjct: 570 VDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSA 629

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
            +     +  +     + +   +  G    + ++D+  R G L +++ + +  +   D  
Sbjct: 630 AASLSALKKGKEIHGFLIRKGFVLEG-SLASTLVDMYARCGTLEKSRNVFN-FIRNKDLV 687

Query: 608 VWKALLSACRVHGDLELGERAANNLF 633
           +W ++++A  +HG      RAA +LF
Sbjct: 688 LWTSMINAYGMHG----CGRAAIDLF 709



 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 179/514 (34%), Positives = 272/514 (52%), Gaps = 23/514 (4%)

Query: 131 PSQYTLD----NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA-FVVTGLVDMYAKCKCIF 185
           PSQ++LD    +VL LC  K  L  G+Q H + I +    N+ F+ T LV MY KC C+ 
Sbjct: 108 PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLV 167

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +AE LF   P  K    W  MI  Y  NG    ++E +R+MRV G+  +  TFP IL AC
Sbjct: 168 DAEKLFDGMPH-KTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKAC 226

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE-YSEIDNEVSW 304
             +  R  GA+VHG  +  G+ + V+V ++++ MY KC DL+ AR+L +   E ++ VSW
Sbjct: 227 GLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSW 286

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           NSMI  ++  G   EAL LF +M    +  + +T+ + L     +  +     +H+ ++K
Sbjct: 287 NSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLK 346

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
           + +    FV NALI MYA+ G +  A  +F  M D D ISW S+++G   +G Y EAL++
Sbjct: 347 SSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQF 406

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           + +MR +G  PD V V SI++A A       G Q+HA  +K+G  S L V NSLV +YAK
Sbjct: 407 YHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAK 466

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
              +   + +FD M  +DV++WT +I G AQNG    AL+ + ++   G   D +    +
Sbjct: 467 FCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSI 526

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC---MIDLLGRSGKLIEAKALLDQMV 601
           L ACS   L  + +         Y I+ G         ++D+ G  G  ++  A + +++
Sbjct: 527 LLACSGLKLISSVKEIHS-----YIIRKGLSDLVLQNGIVDVYGECGN-VDYAARMFELI 580

Query: 602 GEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
              D   W +++S C VH  L      AN   EL
Sbjct: 581 EFKDVVSWTSMIS-CYVHNGL------ANEALEL 607



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 217/427 (50%), Gaps = 37/427 (8%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  ++  G++ EA  +F  M D D  +WN+M++                        
Sbjct: 357 NALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLS------------------------ 392

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
                  G+   GL  EA + + +M+  G +P    + +++   +  G    G Q H YA
Sbjct: 393 -------GFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYA 445

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           +K   D +  V   LVDMYAK   +   + +F   PD K+ V+WTT+I G++QNG   +A
Sbjct: 446 MKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPD-KDVVSWTTIIAGHAQNGSHSRA 504

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           +E FR++++EG++ +     SIL AC+ +       ++H  I+  G  +++ +Q+ ++D+
Sbjct: 505 LELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDV 563

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           Y +CG++D A R+ E  E  + VSW SMI  +   G   EAL LF  M    ++ D  + 
Sbjct: 564 YGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISL 623

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
            S+L+  AS   L   K +H  +++ GF     + + L+DMYA+ G L+ +  VFN +++
Sbjct: 624 VSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRN 683

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           KD++ WTS+I     HG    A+  F  M    I PDH+   ++L AC+   ++  G++ 
Sbjct: 684 KDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRR- 742

Query: 460 HAVFLKS 466
              FL+S
Sbjct: 743 ---FLES 746



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 212/423 (50%), Gaps = 12/423 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D    N+++  YA    ++    +F++ P K+  +W+++I G++  G    A ELF +
Sbjct: 451 DSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFRE 510

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           +QLEG       + ++L  CS   L+   ++ H Y I+     +  +  G+VD+Y +C  
Sbjct: 511 VQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECGN 569

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +  A  +F++  + K+ V+WT+MI+ Y  NG   +A+E F  M+  GVE +  +  SIL+
Sbjct: 570 VDYAARMFELI-EFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILS 628

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           A A++SA   G ++HG ++  GF     + S L+DMYA+CG L+ +R +  +    + V 
Sbjct: 629 AAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVL 688

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLI 362
           W SMI  +   G  + A+ LF++M    I  D   + +VL  C  S +     + + S+ 
Sbjct: 689 WTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMK 748

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEA 421
            +   E +      L+D+  +  +L+ A+     M+ +     W +L+  C  H + E  
Sbjct: 749 YEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKE-- 806

Query: 422 LKYFSDMRISGICPD----HVVVSSILSACAELT-VLEFGQQVHAVFLKSG-GCSSLSVD 475
           L   +  ++  + P+    +V+VS++ +A      V E   ++ A  LK   GCS + V 
Sbjct: 807 LGEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVG 866

Query: 476 NSL 478
           N +
Sbjct: 867 NKV 869



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 33/209 (15%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           L   +VD +   G +D A ++FE +  +D  +W +MI+ Y ++                 
Sbjct: 556 LQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHN----------------- 598

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                         GL  EA ELF  M+  G  P   +L ++L   +    L++G++ HG
Sbjct: 599 --------------GLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHG 644

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
           + I+  F L   + + LVDMYA+C  + ++  +F  F   K+ V WT+MI  Y  +G G 
Sbjct: 645 FLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFN-FIRNKDLVLWTSMINAYGMHGCGR 703

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACA 246
            AI+ FR M  E +  +   F ++L AC+
Sbjct: 704 AAIDLFRRMEDESIAPDHIAFVAVLYACS 732


>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera]
 gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 272/675 (40%), Positives = 412/675 (61%), Gaps = 33/675 (4%)

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
           N F    ++ +Y+K   + + + +F + P  ++ V+W   I+GY+  G    A+  ++ M
Sbjct: 70  NLFSWNTILSVYSKLGLLSQMQQIFNLMP-FRDGVSWNLAISGYANYGSCSDAVRVYKLM 128

Query: 227 -RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK--- 282
            +   +  N+ TF ++L  C+     D G Q++G IL  GF ++V+V S L+DMY K   
Sbjct: 129 LKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGL 188

Query: 283 ----------------------------CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
                                       CG ++ ++RL    +  + +SW  MI G  + 
Sbjct: 189 IYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQN 248

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
           G  +EAL +F++M      +D FT+ SVL    S + L   K +H+ +++T  +   FV 
Sbjct: 249 GLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVG 308

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           +AL+DMY+K  ++  A  VF  M  K+VISWT+++ G   +G  EEA+K F +M+ +G+ 
Sbjct: 309 SALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVE 368

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           PD   + S++S+CA L  LE G Q H   L SG  S ++V N+L+ +Y KCG   +++R+
Sbjct: 369 PDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRL 428

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
           F  M+ RD ++WTAL+ G AQ GK  E +  +++MLA G KPD +TF+G+L ACS AGL 
Sbjct: 429 FTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLV 488

Query: 555 ENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
           E    YFESM K +GI P  DH  C+IDLLGR+G+L EA+  ++ M   PD   W  LLS
Sbjct: 489 EKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLS 548

Query: 615 ACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
           +CRVHGD+E+G+ AA++L  LEP N   YV LS++Y++ GKW+  A++R+ M+ + +RKE
Sbjct: 549 SCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKE 608

Query: 675 PGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGK 734
           PG SW++   +VH+F ++D+  P    IY++++++   + E GYVPDM+  LH+VEE  K
Sbjct: 609 PGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEGYVPDMSSVLHDVEESEK 668

Query: 735 EIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNR 794
              L +HSEKLA+AFGL+ +P G PIR+ KNLRVCGDCH A K+IS +  R I++RD+ R
Sbjct: 669 IKMLNHHSEKLAIAFGLIFVPPGLPIRVIKNLRVCGDCHNATKFISKITQREILVRDAVR 728

Query: 795 FHHFKAGNCSCGDYW 809
           FH FK G CSCGD+W
Sbjct: 729 FHLFKDGTCSCGDFW 743



 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 169/582 (29%), Positives = 281/582 (48%), Gaps = 68/582 (11%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  +   G +  A  +F+ +   + F+WNT+++ Y+  G L + +++FN  PF++  
Sbjct: 44  NNLITAYYKLGNLAYAHHVFDHIPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGV 103

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
           +W+  I GY+NYG   +A  ++  M  +     ++ T   +L LCS    +  G Q +G 
Sbjct: 104 SWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQ 163

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD---------------------- 196
            +K  F  + FV + LVDMY K   I++A+  F   P+                      
Sbjct: 164 ILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEES 223

Query: 197 --------GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
                    ++ ++WT MITG  QNG   +A++ FR+MR+ G   +QFTF S+LTAC ++
Sbjct: 224 QRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSL 283

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
            A   G Q+H  ++ +  + NV+V SAL+DMY+KC  + SA  + +     N +SW +M+
Sbjct: 284 LALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAML 343

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
           VG+ + GF +EA+ +F +M    ++ DDFT  SV++  A+   L      H   + +G  
Sbjct: 344 VGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLI 403

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
            +  V+NALI +Y K G+ + +  +F  M  +D +SWT+L+ G A  G   E +  F  M
Sbjct: 404 SFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERM 463

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
              G+ PD V    +LSAC+   ++E G Q     +K  G         ++ +   C CI
Sbjct: 464 LAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHG---------IMPIVDHCTCI 514

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
            D                   ++G A  G+ +EA  F + M      PD + +  LL +C
Sbjct: 515 ID-------------------LLGRA--GRLEEARNFINNMPCH---PDVVGWATLLSSC 550

Query: 549 SHAGLAENARWYFESMDKVYGIKP-GPDHYACMIDLLGRSGK 589
              G  E  +W   + D +  ++P  P  Y  +  L    GK
Sbjct: 551 RVHGDMEIGKW---AADSLIALEPQNPASYVLLSSLYASKGK 589



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 200/442 (45%), Gaps = 67/442 (15%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           + S+L  C     +    ++H  IL +  +   ++ + LI  Y K G+L  A  + ++  
Sbjct: 8   YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD-------------------------- 331
             N  SWN+++  +++ G   +   +F  M  RD                          
Sbjct: 68  QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127

Query: 332 ------IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
                 + ++  T+ ++L   +    ++  + ++  I+K GF    FV + L+DMY K G
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187

Query: 386 NL----------------DCAFMVFNLM---------------QDKDVISWTSLITGCAY 414
            +                 C  M+  LM               +++D ISWT +ITG   
Sbjct: 188 LIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQ 247

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
           +G   EAL  F +MR++G   D     S+L+AC  L  L  G+Q+HA  +++    ++ V
Sbjct: 248 NGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFV 307

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
            ++LV +Y+KC  I  A  VF  M  ++VI+WTA+++G  QNG  +EA++ + +M   G 
Sbjct: 308 GSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGV 367

Query: 535 KPDYITFVGLLFACSH-AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
           +PD  T   ++ +C++ A L E A+++  ++  V G+         +I L G+ G    +
Sbjct: 368 EPDDFTLGSVISSCANLASLEEGAQFHCRAL--VSGLISFITVSNALITLYGKCGSTENS 425

Query: 594 KALLDQMVGEPDATVWKALLSA 615
             L  +M    D   W ALL+ 
Sbjct: 426 HRLFTEM-NIRDEVSWTALLAG 446


>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
 gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 291/748 (38%), Positives = 445/748 (59%), Gaps = 10/748 (1%)

Query: 70  WNTMIAAYANSGRLREAKKLFNETPF--KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           +  ++  Y     L+ A+ +F++ P   KN   W+ LI  Y+  G   EA +L+++M   
Sbjct: 54  FEKLVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGY 113

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G  P+++T   VL+ CS       G + H    +   + N +V T LVD YAKC C+ +A
Sbjct: 114 GITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDA 173

Query: 188 EYLF-KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           + +F KM    ++ VAW +MI+G+S +   +  +          V  N  T   +L A A
Sbjct: 174 KEVFDKMHK--RDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVA 231

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI-DNEVSWN 305
            V++   G ++HG  +  GF  +V V + ++D+Y KC  +D ARR+ +   I  NEV+W+
Sbjct: 232 QVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWS 291

Query: 306 SMIVGFARQGFHKEALSLF-KKMHARD--IKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           +M+  +    F +EAL LF + +  +D  I +   T  +V+   A+  DL+    +H   
Sbjct: 292 AMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYA 351

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           +K+GF     V N L+ MYAK G ++ A   FN M  +D +S+T++I+G   +G+ EE L
Sbjct: 352 IKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGL 411

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
           + F +M++SGI P+   ++S+L ACA L  L +G   H   +  G  +   + N+L+ +Y
Sbjct: 412 RMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMY 471

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
           AKCG I+ A +VFD MH R +++W  +I+    +G G EAL  +D M + G KPD +TF+
Sbjct: 472 AKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFI 531

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
            L+ ACSH+GL    +++F +M + +GI P  +HYACM+DLL R+G   E  + +++M  
Sbjct: 532 CLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPL 591

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
           EPD  VW ALLSACRV+ ++ELGE  +  + +L P +   +V LSNMYS  G+W+DAA+V
Sbjct: 592 EPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQV 651

Query: 663 RKLMKSRGIRKEPGCSWVETNSQVHIFISED-RGHPLRTDIYSKIDEIMLLIKEAGYVPD 721
           R   K +G  K PGCSW+E +  VH F+    R HP  T I +K+DE+++ +K  GY  +
Sbjct: 652 RFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQAE 711

Query: 722 MNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISA 781
            ++   +VEEE KE  L YHSEKLA+AFG+L+L     I + KNLRVCGDCHTA+K+IS 
Sbjct: 712 SSYVFQDVEEEEKERVLLYHSEKLAIAFGILSLSPDKHIIVTKNLRVCGDCHTAIKFISL 771

Query: 782 VYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           V  R I +RD++RFHHFK G C+CGD+W
Sbjct: 772 VTKRDITVRDASRFHHFKDGICNCGDFW 799



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 5/92 (5%)

Query: 67  GFTWNTMIA-----AYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELF 121
           GFT +TMI       YA  G++  A+K+F+    +   +W+++I  Y  +G+ +EA  LF
Sbjct: 456 GFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLF 515

Query: 122 WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE 153
             MQ EG +P   T   ++  CS  GL+  G+
Sbjct: 516 DNMQSEGLKPDDVTFICLISACSHSGLVAEGK 547


>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
 gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
          Length = 745

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 276/676 (40%), Positives = 404/676 (59%), Gaps = 34/676 (5%)

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
           N F    L+   A  + + + E LF      ++ V++  +I G+S  G   +A+  +  +
Sbjct: 71  NLFTYNALLSTLAHARLLSDMEALFASMTQ-RDIVSYNAVIAGFSGGGSHAQAVRVYLAL 129

Query: 227 RV--EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK-- 282
                 V  ++ T  +++ A +A+  R  G Q H  IL  GF AN +V S L+DMYAK  
Sbjct: 130 LQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMS 189

Query: 283 -----------------------------CGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
                                        C  ++ ARRL E     + ++W +M+ GF +
Sbjct: 190 LVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQ 249

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
            G   EAL +F++M  + I ID +T+ S+L    +   L   K +H+ I++T ++   FV
Sbjct: 250 NGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFV 309

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
            +AL+DMY+K  ++  A  VF  M  K++ISWT+LI G   +G  EEA++ FS+M+  GI
Sbjct: 310 GSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGI 369

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
            PD   + S++S+CA L  LE G Q H + L SG    ++V N+LV +Y KCG I DA+R
Sbjct: 370 DPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHR 429

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGL 553
           +FD M   D ++WTAL+ G AQ G+ KE +  +++MLA+G KPD +TF+G+L ACS AG 
Sbjct: 430 LFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGF 489

Query: 554 AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
            E  R YF SM K +GI P  DHY CMIDL  RSGKL EA+  + QM   PDA  W  LL
Sbjct: 490 VEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLL 549

Query: 614 SACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRK 673
           SACR+ GD+E+G+ AA NL E++P N   YV L +M++  G+W + A++R+ M+ R ++K
Sbjct: 550 SACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKK 609

Query: 674 EPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEG 733
           EPGCSW++  ++VHIF ++D+ HP    IY K++ +   + E GY PD++  LH+V +  
Sbjct: 610 EPGCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTD 669

Query: 734 KEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSN 793
           K   +++HSEKLA+AFGL+ +PQ  PIRI KNLRVC DCH A K+IS +  R I++RD+ 
Sbjct: 670 KVHMVSHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAV 729

Query: 794 RFHHFKAGNCSCGDYW 809
           RFH F  G CSCGD+W
Sbjct: 730 RFHKFSDGVCSCGDFW 745



 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 181/613 (29%), Positives = 298/613 (48%), Gaps = 75/613 (12%)

Query: 35  PASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP 94
           P   LN  L  +  +G    A ++F+ M   + FT+N +++  A++  L + + LF    
Sbjct: 40  PTYLLNHLLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMT 99

Query: 95  FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL--EGYRPSQYTLDNVLRLCSLKGLLQRG 152
            ++  +++++I G+S  G   +A  ++  +       RPS+ T+  ++   S  G    G
Sbjct: 100 QRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALG 159

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAK-------------------------------C 181
           +QFH   ++  F  NAFV + LVDMYAK                               C
Sbjct: 160 KQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRC 219

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
           K + EA  LF++  D ++ + WTTM+TG++QNG   +A+E FR MR +G+  +Q+TF SI
Sbjct: 220 KMVEEARRLFEVMTD-RDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSI 278

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           LTAC A+SA + G Q+H  I+ + ++ NV+V SAL+DMY+KC  +  A  +       N 
Sbjct: 279 LTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNI 338

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           +SW ++IVG+ + G  +EA+ +F +M    I  DD+T  SV++  A+   L      H L
Sbjct: 339 ISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCL 398

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
            + +G   Y  V+NAL+ +Y K G+++ A  +F+ M   D +SWT+L++G A  G  +E 
Sbjct: 399 ALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKET 458

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           +  F  M   G+ PD V    +LSAC+    +E G+             S+  D+ +V +
Sbjct: 459 IDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYF---------HSMQKDHGIVPI 509

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
                C+ D       +++R              +GK KEA +F  QM      PD I +
Sbjct: 510 DDHYTCMID-------LYSR--------------SGKLKEAEEFIKQM---PMHPDAIGW 545

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKP-GPDHYACMIDLLGRSGKLIEA----KAL 596
             LL AC   G  E  +W  E++ +   I P  P  Y  +  +    G+  E     + +
Sbjct: 546 GTLLSACRLRGDMEIGKWAAENLLE---IDPQNPASYVLLCSMHAAKGQWNEVAQLRRGM 602

Query: 597 LDQMVGEPDATVW 609
            D+ V +     W
Sbjct: 603 RDRQVKKEPGCSW 615


>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 280/663 (42%), Positives = 401/663 (60%), Gaps = 2/663 (0%)

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG-KNHVAWTTMI 207
           L+   Q H   I   +    F+   L+++YAKC C+ +A  LF +     K  V WT++I
Sbjct: 158 LKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLI 217

Query: 208 TGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFE 267
           T  S      +A+  F  MR  G   NQFTF SIL+A AA      G Q+H  I   GF+
Sbjct: 218 THLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFD 277

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK- 326
           AN++V +AL+DMYAKC D+ SA R+ +     N VSWNSMIVGF     +  A+ +FK  
Sbjct: 278 ANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDV 337

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
           +  + +  ++ +  SVL+  A+   LN  + VH ++VK G     +V N+L+DMY K   
Sbjct: 338 LREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRF 397

Query: 387 LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSA 446
            D    +F  + D+DV++W  L+ G   +  +EEA  YF  MR  GI PD    S++L +
Sbjct: 398 FDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHS 457

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITW 506
            A L  L  G  +H   +K G   ++ +  SL+ +YAKCG + DA +VF+ +   +VI+W
Sbjct: 458 SASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISW 517

Query: 507 TALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDK 566
           TA+I     +G   + ++ ++ ML+ G +P ++TFV +L ACSH G  E    +F SM K
Sbjct: 518 TAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKK 577

Query: 567 VYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGE 626
           ++ + PGP+HYACM+DLLGR+G L EAK  ++ M  +P  +VW ALL ACR +G+L++G 
Sbjct: 578 IHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGR 637

Query: 627 RAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQV 686
            AA  LFE+EP N   YV L+NM + +G+ E+A  VR+LM   G+RKEPGCSW++  +  
Sbjct: 638 EAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMT 697

Query: 687 HIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLA 746
            +F + DR H    +IY  ++++  L+K+ GYV +  F  +++EE  +E GL YHSEKLA
Sbjct: 698 FVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLA 757

Query: 747 VAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCG 806
           +AFGLLTLP  +PIRI KNLR CG CHT MK  S ++ R II+RD NRFH F  G CSCG
Sbjct: 758 LAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCG 817

Query: 807 DYW 809
           DYW
Sbjct: 818 DYW 820



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 165/518 (31%), Positives = 266/518 (51%), Gaps = 20/518 (3%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETP--FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           F +N +I  YA  G L +A  LF+ T   FK   TW+SLI   S++ + ++A  LF QM+
Sbjct: 178 FLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLITHLSHFNMHLQALSLFNQMR 237

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G  P+Q+T  ++L   +   ++  G+Q H    K  FD N FV T LVDMYAKC  + 
Sbjct: 238 CSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMH 297

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD-MRVEGVESNQFTFPSILTA 244
            A  +F   P+ +N V+W +MI G+  N    +A+  F+D +R + V  N+ +  S+L+A
Sbjct: 298 SAVRVFDQMPE-RNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSA 356

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           CA +   +FG QVHG ++  G     YV ++L+DMY KC   D   +L +     + V+W
Sbjct: 357 CANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTW 416

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N +++GF +    +EA + F  M    I  D+ ++ +VL+  AS   L+   ++H  I+K
Sbjct: 417 NVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIK 476

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            G+     +  +LI MYAK G+L  A+ VF  ++D +VISWT++I+    HG   + ++ 
Sbjct: 477 LGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIEL 536

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFG----QQVHAVFLKSGGCSSLSVDNSLVL 480
           F  M   GI P HV    +LSAC+    +E G      +  +   + G    +    +V 
Sbjct: 537 FEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYAC---MVD 593

Query: 481 VYAKCGCINDANRVFDSMHTRDVIT-WTALIMGCAQNGK---GKEALQFYDQMLARGTKP 536
           +  + G +++A R  +SM  +   + W AL+  C + G    G+EA +   +M      P
Sbjct: 594 LLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEM--EPYNP 651

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
               +V L   C+ +G  E A      M  V G++  P
Sbjct: 652 G--NYVLLANMCTRSGRLEEANEVRRLMG-VNGVRKEP 686



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 203/443 (45%), Gaps = 33/443 (7%)

Query: 56  GQLFEKMSDRDGFTWNTMIAA-----YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSN 110
           GQ    +  + GF  N  +       YA    +  A ++F++ P +N  +W+S+I G+ +
Sbjct: 264 GQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFH 323

Query: 111 YGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAF 169
             L   A  +F  +  E    P++ ++ +VL  C+  G L  G Q HG  +K       +
Sbjct: 324 NNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTY 383

Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
           V+  L+DMY KC+   E   LF+   D ++ V W  ++ G+ QN    +A   F  MR E
Sbjct: 384 VMNSLMDMYFKCRFFDEGVKLFQCVGD-RDVVTWNVLVMGFVQNDKFEEACNYFWVMRRE 442

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
           G+  ++ +F ++L + A+++A   G  +H  I+  G+  N+ +  +LI MYAKCG L  A
Sbjct: 443 GILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDA 502

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
            ++ E  E  N +SW +MI  +   G   + + LF+ M +  I+    T+  VL+  +  
Sbjct: 503 YQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHT 562

Query: 350 -------IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV 402
                     N+ K +H +    G E Y      ++D+  + G LD A      M  K  
Sbjct: 563 GRVEEGLAHFNSMKKIHDM--NPGPEHYA----CMVDLLGRAGWLDEAKRFIESMPMKPT 616

Query: 403 IS-WTSLITGCAYHGSYE---EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
            S W +L+  C  +G+ +   EA +   +M      P + V+  + + C     LE   +
Sbjct: 617 PSVWGALLGACRKYGNLKMGREAAERLFEMEPYN--PGNYVL--LANMCTRSGRLEEANE 672

Query: 459 VHAVF-----LKSGGCSSLSVDN 476
           V  +       K  GCS + V N
Sbjct: 673 VRRLMGVNGVRKEPGCSWIDVKN 695


>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 810

 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 291/750 (38%), Positives = 440/750 (58%), Gaps = 10/750 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N +IA Y   G +  A K+F+  P +N  +W+S+I G+S  G   + F++  +M 
Sbjct: 65  DVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMM 124

Query: 126 L--EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
              EG  P   TL  VL +C+ +  +Q G + HG A+K     +  V   LVDMY+KC  
Sbjct: 125 AGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGY 184

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV-EGVESNQFTFPSIL 242
           + EA+ LF    + KN V+W TMI G    GY F+A   FR+M++ E +E N+ T  +IL
Sbjct: 185 LTEAQMLFDK-NNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNIL 243

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
            AC  +S      ++HG  +  GF+ +  V +  +  YAKCG L  A R+    E     
Sbjct: 244 PACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVN 303

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SWN++I G A+ G  ++AL+L+ +M    +  D FT  S+L   A    L   K VH  +
Sbjct: 304 SWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFV 363

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           ++ G E   F+  +L+ +Y   G    A ++F+ M++K  +SW ++I+G + +G  E+AL
Sbjct: 364 LRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDAL 423

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
             F  +   G  P  + V S+L AC++ + L  G++ H   LK+     + V  S + +Y
Sbjct: 424 ILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMY 483

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
           AK GCI ++  VFD +  +D+ +W A+I     +G G+E+++ +++M   G  PD  TF+
Sbjct: 484 AKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFI 543

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
           G+L  CSHAGL E    YF  M   +GI+P  +HYAC++D+LGR+G+L +A  L+ +M  
Sbjct: 544 GILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPE 603

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
           +PD+ VW +LLS CR  G+LE+G+  A  L ELEP N   YV LSN+Y+ +G+W+D  RV
Sbjct: 604 QPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRV 663

Query: 663 RKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDI---YSKIDEIMLLIKEAGYV 719
           R+++K  G++K+ GCSW+E   +VH F++ D   P   ++   + K+++ M  I   GY 
Sbjct: 664 RQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRKLEKKMCKI---GYK 720

Query: 720 PDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYI 779
           P+ +  LH+V+EE K   L  HSEKLA+ FGLL   +G  +RIFKNLR+C DCH A K++
Sbjct: 721 PNTSAVLHDVDEEKKIEKLRGHSEKLAICFGLLNTTKGTTLRIFKNLRICVDCHNASKFM 780

Query: 780 SAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           S V  R II+RD+ RFHHFK G CSCGDYW
Sbjct: 781 SEVTGREIIIRDNKRFHHFKDGLCSCGDYW 810



 Score =  255 bits (651), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 174/567 (30%), Positives = 290/567 (51%), Gaps = 40/567 (7%)

Query: 116 EAFELFWQMQLEG-YRPSQYTLDNVLRLCSLKGLLQRG--EQFHGYAIKTCFDLNAFVVT 172
           +A ++F ++  +  +    +T   V++ C+  G L RG  E  HG  IK    L+ FV  
Sbjct: 13  DAIDMFVKLITDTEFNADNFTFPCVIKACT--GSLDRGLGEVIHGMVIKMGLLLDVFVGN 70

Query: 173 GLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV--EG 230
            L+ MY K   +  A  +F   P  +N V+W ++I+G+S+NG+     +   +M    EG
Sbjct: 71  ALIAMYGKFGFVDAAVKVFHYMPV-RNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEG 129

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           +  +  T  ++L  CA       G ++HG  +  G   +V V ++L+DMY+KCG L  A+
Sbjct: 130 LLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQ 189

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR-DIKIDDFTYPSVLNCFASN 349
            L + +   N VSWN+MI G   +G+  EA +LF++M  + DI++++ T  ++L      
Sbjct: 190 MLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEI 249

Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
             L + K +H   ++ GF+  + V N  +  YAK G L CA  VF  M+ K V SW +LI
Sbjct: 250 SQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALI 309

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
            GCA +G   +AL  +  M  SG+ PD   + S+L A A L  L +G++VH   L+ G  
Sbjct: 310 GGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHG-- 367

Query: 470 SSLSVDN----SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
             L +D+    SL+ +Y  CG  + A  +FD M  +  ++W A+I G +QNG  ++AL  
Sbjct: 368 --LEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALIL 425

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAG---LAENARWYFES---MDKVYGIKPGPDHYAC 579
           + ++++ G +P  I  V +L ACS      L +    Y      M+ V+         AC
Sbjct: 426 FRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVF--------VAC 477

Query: 580 -MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM 638
             ID+  +SG + E++++ D +  + D   W A+++A  VHGD   GE +      +  +
Sbjct: 478 STIDMYAKSGCIKESRSVFDGLKNK-DLASWNAIIAAYGVHGD---GEESIELFERMRKV 533

Query: 639 NAMP----YVQLSNMYSTAGKWEDAAR 661
             MP    ++ +  + S AG  E+  +
Sbjct: 534 GQMPDGFTFIGILTVCSHAGLVEEGLK 560



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 163/584 (27%), Positives = 267/584 (45%), Gaps = 54/584 (9%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           +N +LVD +S  G + EA  LF+K + ++  +WNTMI      G +              
Sbjct: 171 VNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYI-------------- 216

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQL-EGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
                             EAF LF +MQ+ E    ++ T+ N+L  C     L+  ++ H
Sbjct: 217 -----------------FEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELH 259

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
           GY+I+  F  +  V  G V  YAKC  +  AE +F    + K   +W  +I G +QNG  
Sbjct: 260 GYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSM-ETKTVNSWNALIGGCAQNGDP 318

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
            KA+  +  M   G+  + FT  S+L A A + +  +G +VHG +L  G E + ++  +L
Sbjct: 319 RKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISL 378

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           + +Y  CG+  SAR L +  E  + VSWN+MI G+++ G  ++AL LF+K+ +   +  D
Sbjct: 379 LSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSD 438

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
               SVL   +    L   K  H   +K       FV  + IDMYAK G +  +  VF+ 
Sbjct: 439 IAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDG 498

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
           +++KD+ SW ++I     HG  EE+++ F  MR  G  PD      IL+ C+   ++E G
Sbjct: 499 LKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEG 558

Query: 457 -------QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTA 508
                  Q  H +  K      L     ++ +  + G ++DA R+   M  + D   W++
Sbjct: 559 LKYFNEMQNFHGIEPK------LEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSS 612

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
           L+  C   G+  E  Q   + L      +   +V L    + +G  ++ R     M K  
Sbjct: 613 LLSFCRNFGE-LEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVR-RVRQMIKDI 670

Query: 569 GIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
           G++   D     I+L G+    +    LL Q   +  +  W+ L
Sbjct: 671 GLQ--KDAGCSWIELGGKVHSFVAGDNLLPQ--SKEMSMTWRKL 710



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 164/337 (48%), Gaps = 22/337 (6%)

Query: 307 MIVGFARQGFHKEALSLFKKMHA-RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           M V   R   + +A+ +F K+    +   D+FT+P V+     ++D    + +H +++K 
Sbjct: 1   MHVAVHRNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKM 60

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G     FV NALI MY K G +D A  VF+ M  ++++SW S+I+G + +G  ++     
Sbjct: 61  GLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDML 120

Query: 426 SDMRI--SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            +M     G+ PD   + ++L  CA    ++ G ++H + +K G    + V+NSLV +Y+
Sbjct: 121 VEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYS 180

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM-LARGTKPDYITFV 542
           KCG + +A  +FD  + ++ ++W  +I G    G   EA   + +M +    + + +T +
Sbjct: 181 KCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVL 240

Query: 543 GLLFACSHAGLAENARWYFESMDKVYG--IKPGPDHYACM----IDLLGRSGKLIEAKAL 596
            +L AC              S+ +++G  I+ G  +   +    +    + G LI A+ +
Sbjct: 241 NILPACLEIS-------QLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERV 293

Query: 597 LDQMVGEPDATVWKALLSACRVHGDLELGERAANNLF 633
              M  +     W AL+  C  +GD     R A NL+
Sbjct: 294 FYSMETKT-VNSWNALIGGCAQNGD----PRKALNLY 325


>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
 gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
 gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
 gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 990

 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 301/799 (37%), Positives = 448/799 (56%), Gaps = 41/799 (5%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF----------NETPFK--- 96
           G++ E   LFE+M  RD   WN M+ AY   G   EA  L           NE   +   
Sbjct: 194 GKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLA 253

Query: 97  -------------------NFFTWSSLIY---GYSNY---GLDIEAFELFWQMQLEGYRP 131
                              +  + S +I+   G S Y   G      + F  M       
Sbjct: 254 RISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVEC 313

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
            Q T   +L        L  G+Q H  A+K   DL   V   L++MY K +    A  +F
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV-SA 250
               + ++ ++W ++I G +QNG   +A+  F  +   G++ +Q+T  S+L A +++   
Sbjct: 374 DNMSE-RDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEG 432

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
                QVH   +     ++ +V +ALID Y++   +  A  L E    D  V+WN+M+ G
Sbjct: 433 LSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFD-LVAWNAMMAG 491

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           + +     + L LF  MH +  + DDFT  +V         +N  K VH+  +K+G++  
Sbjct: 492 YTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLD 551

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
            +V++ ++DMY K G++  A   F+ +   D ++WT++I+GC  +G  E A   FS MR+
Sbjct: 552 LWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRL 611

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
            G+ PD   ++++  A + LT LE G+Q+HA  LK    +   V  SLV +YAKCG I+D
Sbjct: 612 MGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDD 671

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           A  +F  +   ++  W A+++G AQ+G+GKE LQ + QM + G KPD +TF+G+L ACSH
Sbjct: 672 AYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSH 731

Query: 551 AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
           +GL   A  +  SM   YGIKP  +HY+C+ D LGR+G + +A+ L++ M  E  A++++
Sbjct: 732 SGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYR 791

Query: 611 ALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRG 670
            LL+ACRV GD E G+R A  L ELEP+++  YV LSNMY+ A KW++    R +MK   
Sbjct: 792 TLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHK 851

Query: 671 IRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVE 730
           ++K+PG SW+E  +++HIF+ +DR +     IY K+ +++  IK+ GYVP+ +F L +VE
Sbjct: 852 VKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVE 911

Query: 731 EEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILR 790
           EE KE  L YHSEKLAVAFGLL+ P   PIR+ KNLRVCGDCH AMKYI+ VY R I+LR
Sbjct: 912 EEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLR 971

Query: 791 DSNRFHHFKAGNCSCGDYW 809
           D+NRFH FK G CSCGDYW
Sbjct: 972 DANRFHRFKDGICSCGDYW 990



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 154/594 (25%), Positives = 264/594 (44%), Gaps = 55/594 (9%)

Query: 59  FEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI--- 115
           FE+  +R  F  N +I+ Y+  G L  A+++F++ P ++  +W+S++  Y+     +   
Sbjct: 68  FEENPER--FLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVEN 125

Query: 116 --EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG 173
             +AF LF  ++ +    S+ TL  +L+LC   G +   E FHGYA K   D + FV   
Sbjct: 126 IQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGA 185

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
           LV++Y K   + E + LF+  P  ++ V W  M+  Y + G+  +AI+        G+  
Sbjct: 186 LVNIYLKFGKVKEGKVLFEEMP-YRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNP 244

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
           N+ T    L   A +S  D  A                     +  +A   D  S     
Sbjct: 245 NEIT----LRLLARISGDDSDA-------------------GQVKSFANGNDASSV---- 277

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
             SEI   +  N  +  +   G +   L  F  M   D++ D  T+  +L        L 
Sbjct: 278 --SEI---IFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLA 332

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
             + VH + +K G +    V+N+LI+MY K      A  VF+ M ++D+ISW S+I G A
Sbjct: 333 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA 392

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV-LEFGQQVHAVFLKSGGCSSL 472
            +G   EA+  F  +   G+ PD   ++S+L A + L   L   +QVH   +K    S  
Sbjct: 393 QNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDS 452

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
            V  +L+  Y++  C+ +A  +F+  H  D++ W A++ G  Q+  G + L+ +  M  +
Sbjct: 453 FVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQ 511

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH----YACMIDLLGRSG 588
           G + D  T   +   C         +         Y IK G D      + ++D+  + G
Sbjct: 512 GERSDDFTLATVFKTCGFLFAINQGKQV-----HAYAIKSGYDLDLWVSSGILDMYVKCG 566

Query: 589 KLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
            +  A+   D  +  PD   W  ++S C  +G+    ERA +   ++  M  +P
Sbjct: 567 DMSAAQFAFDS-IPVPDDVAWTTMISGCIENGE---EERAFHVFSQMRLMGVLP 616



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 123/370 (33%), Positives = 196/370 (52%), Gaps = 17/370 (4%)

Query: 13  LRCRSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNT 72
           LRC  K   P +YT  + + +K AS L   L   S S ++         +SD   F    
Sbjct: 408 LRCGLK---PDQYT--MTSVLKAASSLPEGL---SLSKQVHVHAIKINNVSD--SFVSTA 457

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +I AY+ +  ++EA+ LF    F +   W++++ GY+      +  +LF  M  +G R  
Sbjct: 458 LIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSD 516

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
            +TL  V + C     + +G+Q H YAIK+ +DL+ +V +G++DMY KC  +  A++ F 
Sbjct: 517 DFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFD 576

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
             P   + VAWTTMI+G  +NG   +A   F  MR+ GV  ++FT  ++  A + ++A +
Sbjct: 577 SIP-VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALE 635

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G Q+H   L      + +V ++L+DMYAKCG +D A  L +  E+ N  +WN+M+VG A
Sbjct: 636 QGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLA 695

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLI----VKTGF 367
           + G  KE L LFK+M +  IK D  T+  VL+ C  S +     K + S+     +K   
Sbjct: 696 QHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEI 755

Query: 368 EGYKFVNNAL 377
           E Y  + +AL
Sbjct: 756 EHYSCLADAL 765



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 5/196 (2%)

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           DL   K  H+ I+       +F+ N LI MY+K G+L  A  VF+ M D+D++SW S++ 
Sbjct: 54  DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILA 113

Query: 411 GCAYHG-----SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
             A        + ++A   F  +R   +    + +S +L  C     +   +  H    K
Sbjct: 114 AYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACK 173

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
            G      V  +LV +Y K G + +   +F+ M  RDV+ W  ++    + G  +EA+  
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233

Query: 526 YDQMLARGTKPDYITF 541
                + G  P+ IT 
Sbjct: 234 SSAFHSSGLNPNEITL 249



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 11/203 (5%)

Query: 247 AVSARDF--GAQVHGCILSSGFEANV--YVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           A+++ D   G   H  IL+  FE N   ++ + LI MY+KCG L  ARR+ +     + V
Sbjct: 49  AITSSDLMLGKCTHARILT--FEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLV 106

Query: 303 SWNSMIVGFARQG-----FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
           SWNS++  +A+         ++A  LF+ +    +     T   +L     +  +  ++S
Sbjct: 107 SWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASES 166

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
            H    K G +G +FV  AL+++Y K G +    ++F  M  +DV+ W  ++      G 
Sbjct: 167 FHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGF 226

Query: 418 YEEALKYFSDMRISGICPDHVVV 440
            EEA+   S    SG+ P+ + +
Sbjct: 227 KEEAIDLSSAFHSSGLNPNEITL 249


>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
 gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
          Length = 747

 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 293/749 (39%), Positives = 434/749 (57%), Gaps = 73/749 (9%)

Query: 128 GYRPSQYTLDNVLRLCSLKGL-LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
           G   S Y ++N++ L +  G  L   + F+   +KT F  N  +++G    YAK   + +
Sbjct: 5   GLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNT-ILSG----YAKQGKLEK 59

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A  +F + P  ++ V+WTT+I GY+Q G    AI+ F DM  + V   QFT  ++L +CA
Sbjct: 60  AHQVFDLIP-VRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCA 118

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE----- 301
           A  +R  G +VH  ++  G  A V V ++L++MYAK GDL  A+ + +  ++ N      
Sbjct: 119 ATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNA 178

Query: 302 --------------------------VSWNSMIVGFARQGFHKEALSLFKK-MHARDIKI 334
                                     VSWNSMI G  + GF  EAL  F   +    +K 
Sbjct: 179 MISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKP 238

Query: 335 DDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF--- 391
           D F+  S L+  A+   L+  K +H  IV+T F+    V NALI MYAK G ++ A    
Sbjct: 239 DRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRII 298

Query: 392 ------------------------------MVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
                                          +FN ++D DV++WT++I G   +G   +A
Sbjct: 299 EQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDA 358

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           ++ F  M   G  P+   ++++LSA + +T L  G+Q+HA  ++SG   S SV N+L  +
Sbjct: 359 IEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTM 418

Query: 482 YAKCGCINDANRVFDSM-HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           YAK G IN A +VF+ +   RD ++WT++IM  AQ+G G+EA++ ++QML  G KPD+IT
Sbjct: 419 YAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHIT 478

Query: 541 FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
           +VG+L AC+H GL E  R YF+ M  V+ I P   HYACM+DL GR+G L EA   ++ M
Sbjct: 479 YVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENM 538

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAA 660
             EPD   W +LLS+C+V+ +++L + AA  L  +EP N+  Y  L+N+YS+ GKW+DAA
Sbjct: 539 PMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAA 598

Query: 661 RVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
           ++RKLMK+RG++KE G SWV+  ++ H+F  ED  HP + +IY  +D+I   IK+ G+ P
Sbjct: 599 KIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMGFAP 658

Query: 721 DMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYIS 780
           D    LH++E E K+  L YHSEKLA+AFG+++ P+   +RI KNLRVC DCH A+K+IS
Sbjct: 659 DTESVLHDLEVEVKDQILRYHSEKLAIAFGIISTPENTTLRIMKNLRVCNDCHNAIKFIS 718

Query: 781 AVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            +  R II+RD+ RFHHFK G+CSC DYW
Sbjct: 719 KLVDREIIVRDATRFHHFKDGSCSCKDYW 747



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 159/549 (28%), Positives = 280/549 (51%), Gaps = 81/549 (14%)

Query: 39  LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF 98
           +N  +  ++ +G   +A  LF +M  +  F+WNT+++ YA  G+L +A ++F+  P ++ 
Sbjct: 13  MNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDS 72

Query: 99  FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
            +W+++I GY+  G   +A ++F  M  +   P+Q+TL NVL  C+  G    G++ H +
Sbjct: 73  VSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSF 132

Query: 159 AIKTCFDLNAFVVTGLVDMYAK------CKCIFEAEYL---------------------- 190
            +K        V   L++MYAK       K +F+   L                      
Sbjct: 133 VVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLA 192

Query: 191 ---FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD-MRVEGVESNQFTFPSILTACA 246
              F++  + ++ V+W +MI G +Q+G+  +A++ F   ++   ++ ++F+  S L+ACA
Sbjct: 193 LAQFELLSE-RDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACA 251

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID------- 299
            +    FG Q+HG I+ + F+A+  V +ALI MYAK G ++ ARR++E S I        
Sbjct: 252 NLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAF 311

Query: 300 --------------------------NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
                                     + V+W +MIVG+ + G + +A+ +FK M +   +
Sbjct: 312 TALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPR 371

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
            + FT  ++L+  +S   LN+ K +H+  +++G      V NAL  MYAK G+++ A  V
Sbjct: 372 PNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKV 431

Query: 394 FNLM-QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV 452
           FNL+ Q++D +SWTS+I   A HG  EEA++ F  M   GI PDH+    +LSAC    +
Sbjct: 432 FNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGL 491

Query: 453 LEFG-------QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVI 504
           +E G       + VH +        +LS    +V ++ + G + +A +  ++M    DVI
Sbjct: 492 VEQGRSYFDLMKNVHKI------DPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVI 545

Query: 505 TWTALIMGC 513
            W +L+  C
Sbjct: 546 AWGSLLSSC 554



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 80/189 (42%), Gaps = 45/189 (23%)

Query: 463 FLKSGGCSSLSVDNSLVLVYAKCGC-------------------------------INDA 491
            +K G   S+ + N+L+ +YAK G                                +  A
Sbjct: 1   MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
           ++VFD +  RD ++WT +I+G  Q G+ ++A++ +  M+     P   T   +L +C+  
Sbjct: 61  HQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAAT 120

Query: 552 GLAENARWYFESMDKVYGIKPGPDHYAC------MIDLLGRSGKLIEAKALLDQMVGEPD 605
           G     +       KV+        +AC      ++++  ++G L  AK + D+M    +
Sbjct: 121 GSRGIGK-------KVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLR-N 172

Query: 606 ATVWKALLS 614
            + W A++S
Sbjct: 173 TSSWNAMIS 181


>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
          Length = 869

 Score =  546 bits (1408), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 296/777 (38%), Positives = 438/777 (56%), Gaps = 34/777 (4%)

Query: 67  GFT---WNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           GFT    N ++ AYA  G L  A  LFN  P ++  T++SLI     +   + A +    
Sbjct: 93  GFTPAVANALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRD 152

Query: 124 MQLEGYRPSQYTLDNVLRLCS-LKGLLQRGEQFHGYAIKTCF--DLNAFVVTGLVDMYAK 180
           M LEG+  S +TL +VL  CS L   L+ G + H +A+K  F      F    L+ MYA+
Sbjct: 153 MLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYAR 212

Query: 181 CKCIFEAEYLFKMF----PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
              + +A+ LF         G   V W TM++   Q+G   +AIE   DM   GV  +  
Sbjct: 213 LGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGI 272

Query: 237 TFPSILTACAAVSARDFGAQVHGCILS-SGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
           TF S L AC+ +     G ++H  +L  S   AN +V SAL+DMYA    +  ARR+ + 
Sbjct: 273 TFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDM 332

Query: 296 SEIDNEVS--WNSMIVGFARQGFHKEALSLFKKMHAR-DIKIDDFTYPSVLNCFASNIDL 352
               +     WN+M+ G+A+ G  +EAL LF +M A   +   + T   VL   A +   
Sbjct: 333 VPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETF 392

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
              ++VH  ++K G     FV NAL+D+YA+ G+++ A  +F  ++ +DV+SW +LITGC
Sbjct: 393 AGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGC 452

Query: 413 AYHGSYEEALKYFSDMRISG------------------ICPDHVVVSSILSACAELTVLE 454
              G   +A +   +M+  G                  + P++V + ++L  CA L    
Sbjct: 453 VVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPA 512

Query: 455 FGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCA 514
            G+++H   ++    S ++V ++LV +YAKCGC+  +  VFD +  R+VITW  LIM   
Sbjct: 513 KGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYG 572

Query: 515 QNGKGKEALQFYDQM-LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPG 573
            +G G EA+  +D+M ++   KP+ +TF+  L ACSH+G+ +     F SM + +G++P 
Sbjct: 573 MHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPT 632

Query: 574 PDHYACMIDLLGRSGKLIEAKALLDQM-VGEPDATVWKALLSACRVHGDLELGERAANNL 632
           PD +AC +D+LGR+G+L EA +++  M  GE   + W + L ACR+H ++ LGE AA  L
Sbjct: 633 PDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERL 692

Query: 633 FELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISE 692
           F+LEP  A  YV L N+YS AG WE ++ VR  M+ RG+ KEPGCSW+E +  +H F++ 
Sbjct: 693 FQLEPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFMAG 752

Query: 693 DRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLL 752
           +  HP  T +++ +D +   ++  GY PD +  LH++EE  K   L YHSEKLA+AFGLL
Sbjct: 753 ESAHPESTLVHAHMDALWERMRNQGYTPDTSSVLHDIEESEKAAILRYHSEKLAIAFGLL 812

Query: 753 TLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             P GA IR+ KNLRVC DCH A K+IS +  R I+LRD  RFHHF  G CSCGDYW
Sbjct: 813 RTPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFVDGACSCGDYW 869



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 194/412 (47%), Gaps = 34/412 (8%)

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSS----GFEANVYVQSALIDMYAKCGDLDSA 289
           + F  P    + AA+ +      +HG  L      GF     V +AL+  YA+CGDL +A
Sbjct: 58  DHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGF--TPAVANALLTAYARCGDLTAA 115

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV-LNCFAS 348
             L       + V++NS+I           AL   + M      +  FT  SV L C   
Sbjct: 116 LALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHL 175

Query: 349 NIDLNNAKSVHSLIVKTGF-EG-YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD----- 401
             DL   +  H+  +K GF +G  +F  NAL+ MYA+ G +D A M+F  +   D     
Sbjct: 176 AEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGG 235

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
           V++W ++++     G   EA++   DM   G+ PD +  +S L AC++L +L  G+++HA
Sbjct: 236 VVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHA 295

Query: 462 VFLKSGGCSSLS-VDNSLVLVYAKCGCINDANRVFDSMHT--RDVITWTALIMGCAQNGK 518
             LK    ++ S V ++LV +YA    +  A RVFD +    R +  W A++ G AQ G 
Sbjct: 296 YVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGM 355

Query: 519 GKEALQFYDQMLAR-GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPG-- 573
            +EAL+ + +M A  G  P   T  G+L AC+ +         F   + V+G  +K G  
Sbjct: 356 DEEALELFARMEAEAGVVPSETTIAGVLPACARSE-------TFAGKEAVHGYVLKRGMA 408

Query: 574 --PDHYACMIDLLGRSGKLIEAKALLDQMVGEP-DATVWKALLSACRVHGDL 622
             P     ++DL  R G +  A+ +   +  EP D   W  L++ C V G +
Sbjct: 409 DNPFVQNALMDLYARLGDMEAARWIFAAI--EPRDVVSWNTLITGCVVQGHI 458



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 114/229 (49%), Gaps = 12/229 (5%)

Query: 333 KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF-EGY-KFVNNALIDMYAKQGNLDCA 390
            +D F  P      A+   L   +S+H   ++     G+   V NAL+  YA+ G+L  A
Sbjct: 56  PLDHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAA 115

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
             +FN M  +D +++ SLI        +  AL    DM + G       + S+L AC+ L
Sbjct: 116 LALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHL 175

Query: 451 TV-LEFGQQVHAVFLKSG---GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD---- 502
              L  G++ HA  LK+G   G    +  N+L+ +YA+ G ++DA  +F S+ T D    
Sbjct: 176 AEDLRLGREAHAFALKNGFLDGDERFAF-NALLSMYARLGLVDDAQMLFGSVDTTDSPGG 234

Query: 503 -VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
            V+TW  ++    Q+G+  EA++    M+ARG +PD ITF   L ACS 
Sbjct: 235 GVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQ 283



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 132/275 (48%), Gaps = 19/275 (6%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           +  AL+D ++  G+++ A  +F  +  RD  +WNT+I      G + +A +L  E   + 
Sbjct: 413 VQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQG 472

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
            FT ++   G +  G D E              P+  TL  +L  C++     +G++ HG
Sbjct: 473 RFTDATTEDGIA--GTDEEPVV-----------PNNVTLMTLLPGCAMLAAPAKGKEIHG 519

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
           YA++   D +  V + LVDMYAKC C+  +  +F   P  +N + W  +I  Y  +G G 
Sbjct: 520 YAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPK-RNVITWNVLIMAYGMHGLGD 578

Query: 218 KAIECFRDMRVEG-VESNQFTFPSILTACAAVSARDFGAQV-HGCILSSGFEANVYVQSA 275
           +AI  F  M +    + N+ TF + L AC+     D G ++ H    + G +    + + 
Sbjct: 579 EAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHAC 638

Query: 276 LIDMYAKCGDLDSARRLLEYSEI-DNEVS-WNSMI 308
            +D+  + G LD A  ++   E  + +VS W+S +
Sbjct: 639 AVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFL 673



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 105/272 (38%), Gaps = 45/272 (16%)

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS--VDNSLVLVYAKCGCINDANR 493
           DH  +     + A L  L   + +H   L+       +  V N+L+  YA+CG +  A  
Sbjct: 58  DHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALA 117

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH--- 550
           +F++M +RD +T+ +LI       +   AL     ML  G      T V +L ACSH   
Sbjct: 118 LFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAE 177

Query: 551 -----------------------------------AGLAENARWYFESMDKVYGIKPGPD 575
                                               GL ++A+  F S+D       G  
Sbjct: 178 DLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVV 237

Query: 576 HYACMIDLLGRSGKLIEAKALLDQMVG---EPDATVWKALLSACRVHGDLELGERAANNL 632
            +  M+ LL +SG+  EA  ++  MV     PD   + + L AC     L LG      +
Sbjct: 238 TWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYV 297

Query: 633 FELEPMNAMPYV--QLSNMYSTAGKWEDAARV 662
            +   + A  +V   L +MY++  +   A RV
Sbjct: 298 LKDSDLAANSFVASALVDMYASHERVGVARRV 329


>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
 gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
          Length = 865

 Score =  546 bits (1407), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 296/834 (35%), Positives = 463/834 (55%), Gaps = 75/834 (8%)

Query: 40  NRALVDFSNSGEIDEAGQLF-EKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF 98
           N  L  + + G + +A +L    ++  +  T N M+  Y   GRL +A +LF   P ++ 
Sbjct: 43  NTLLHAYLSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDV 102

Query: 99  FTWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
            +W++L+ GY      + + E F  M   G   P+ +T    ++ C   G      Q  G
Sbjct: 103 ASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLG 162

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD-----------------GKNH 200
              K     ++ V   LVDM+ +C  +  A  LF    +                 G +H
Sbjct: 163 MVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDH 222

Query: 201 -------------VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
                        V+W  M++  SQ+G   +A++   DM+ +GV  +  T+ S LTACA 
Sbjct: 223 ALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACAR 282

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           +S+  +G Q+H  ++ +    + YV SAL+++YAKCG    A+ +       N V+W  +
Sbjct: 283 LSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVL 342

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I GF + G   E++ LF +M A  + +D F   ++++   S +DL   + +HSL +K+G 
Sbjct: 343 IAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQ 402

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
                V+N+LI MYAK  NL  A  +F  M +KD++SWTS+IT  +  G+  +A ++F  
Sbjct: 403 IQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDG 462

Query: 428 MRISGIC--------------------------------PDHVVVSSILSACAELTVLEF 455
           M    +                                 PD V   ++   CA+L   + 
Sbjct: 463 MSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKL 522

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
           G Q+    +K G     SV N+++ +Y+KCG I +A +VFD ++ +D+++W A+I G +Q
Sbjct: 523 GDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQ 582

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
           +G GK+A++ +D +L RG KPDYI++V +L  CSH+GL +  + YF+ M +V+ I PG +
Sbjct: 583 HGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLE 642

Query: 576 HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
           H++CM+DLLGR+G L EAK L+D+M  +P A VW ALLSAC++HG+ EL E AA ++FEL
Sbjct: 643 HFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFEL 702

Query: 636 EPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG 695
           +  ++  Y+ ++ +Y+ AGK +D+A++RKLM+ +GI+K PG SW+E N++VH+F ++D  
Sbjct: 703 DSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVNNKVHVFKADDVS 762

Query: 696 HPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLP 755
           HP    I  K+DE+M  I   GYV          +    EI   +HSEKLAVAFGL++LP
Sbjct: 763 HPQVIAIRKKLDELMEKIARLGYV--------RTDSPRSEI---HHSEKLAVAFGLMSLP 811

Query: 756 QGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
              PI I KNLR+CGDCHT +K IS+V  R  ++RD+ RFHHF  G+CSCGDYW
Sbjct: 812 AWMPIHIMKNLRICGDCHTVIKLISSVTGREFVIRDAVRFHHFNGGSCSCGDYW 865



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 158/630 (25%), Positives = 272/630 (43%), Gaps = 106/630 (16%)

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY-------- 189
           + LR C  +G L      HG  +        F+   L+  Y  C  + +A          
Sbjct: 9   DALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDIAH 68

Query: 190 ------------------------LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
                                   LF   P  ++  +W T+++GY Q+     ++E F  
Sbjct: 69  PNVITHNVMLNGYVKLGRLSDAVELFGRMP-ARDVASWNTLMSGYFQSQQYLASLESFVS 127

Query: 226 MRVEGVES-NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
           M   G  S N FTF   + +C A+  R    Q+ G +   G + +  V +AL+DM+ +CG
Sbjct: 128 MHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCG 187

Query: 285 DLDSARRL----------------------------LEYSEIDNE---VSWNSMIVGFAR 313
            +D A RL                            LE  +   E   VSWN M+   ++
Sbjct: 188 TVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQ 247

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
            G  +EAL +   M ++ +++D  TY S L   A    L   K +H+ +++       +V
Sbjct: 248 SGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYV 307

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
            +AL+++YAK G    A  VFN + D++ ++WT LI G   HG + E+++ F+ MR   +
Sbjct: 308 ASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELM 367

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC-------- 485
             D   +++++S C     L  G+Q+H++ LKSG   ++ V NSL+ +YAKC        
Sbjct: 368 TLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAES 427

Query: 486 -----------------------GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEA 522
                                  G I  A   FD M T++VITW A++    Q+G  ++ 
Sbjct: 428 IFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDG 487

Query: 523 LQFYDQMLA-RGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMI 581
           L+ Y+ ML+ +  +PD++T+V L   C+  G  +          KV G+         +I
Sbjct: 488 LRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKV-GLILDTSVANAVI 546

Query: 582 DLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAM 641
            +  + G+++EA+ + D  +   D   W A+++    HG   +G++A     ++    A 
Sbjct: 547 TMYSKCGRILEARKVFD-FLNVKDIVSWNAMITGYSQHG---MGKQAIEIFDDILKRGAK 602

Query: 642 P----YVQLSNMYSTAGKWEDAARVRKLMK 667
           P    YV + +  S +G  ++      +MK
Sbjct: 603 PDYISYVAVLSGCSHSGLVQEGKSYFDMMK 632



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 127/520 (24%), Positives = 220/520 (42%), Gaps = 98/520 (18%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           F   L +C A  A      +HG +++ G  + V++Q+ L+  Y  CG L  ARRLL  ++
Sbjct: 7   FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLL-LTD 65

Query: 298 I--DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI----------------------- 332
           I   N ++ N M+ G+ + G   +A+ LF +M ARD+                       
Sbjct: 66  IAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESF 125

Query: 333 ---------KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK 383
                      + FT+   +    +  + + A  +  ++ K G +    V  AL+DM+ +
Sbjct: 126 VSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVR 185

Query: 384 QGNLDC-------------------------------AFMVFNLMQDKDVISWTSLITGC 412
            G +D                                A  +F+ M ++DV+SW  +++  
Sbjct: 186 CGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSAL 245

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
           +  G   EAL    DM+  G+  D    +S L+ACA L+ L +G+Q+HA  +++  C   
Sbjct: 246 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDP 305

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
            V ++LV +YAKCGC  +A  VF+S+H R+ + WT LI G  Q+G   E+++ ++QM A 
Sbjct: 306 YVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAE 365

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG-------IKPGPDHYAC----MI 581
               D      L+  C               MD   G       +K G          +I
Sbjct: 366 LMTLDQFALATLISGCC------------SRMDLCLGRQLHSLCLKSGQIQAVVVSNSLI 413

Query: 582 DLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFE-LEPMNA 640
            +  +   L  A+++  + + E D   W ++++A    G++      A   F+ +   N 
Sbjct: 414 SMYAKCDNLQSAESIF-RFMNEKDIVSWTSMITAHSQVGNIA----KAREFFDGMSTKNV 468

Query: 641 MPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWV 680
           + +  +   Y   G  ED  R+  +M S    K+    WV
Sbjct: 469 ITWNAMLGAYIQHGAEEDGLRMYNVMLS---EKDVRPDWV 505


>gi|326528959|dbj|BAJ97501.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 514

 Score =  546 bits (1407), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 265/510 (51%), Positives = 350/510 (68%), Gaps = 4/510 (0%)

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           V++N+ I   +R G H+ AL+L  +M AR  + D++T P  LN  A+ + L  A ++HSL
Sbjct: 7   VAYNAAISRCSRAGLHQRALALLHEMRARGHRADEYTLPPALNS-AALLRLP-ADALHSL 64

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           +++ G   +  V NAL+D YAK      A  VF+ M  +DV+SWTSL+TG A   S++ A
Sbjct: 65  LLRAGLAAHLHVANALVDAYAKLSRHGAARAVFDEMPRRDVVSWTSLLTGLARSRSHDSA 124

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           L+ + DM  +G+ PD   V++ LS+CA  T LE G+ VHA  ++      LSV NSLV +
Sbjct: 125 LQVYRDMVAAGVGPDEFAVAAALSSCAGATALELGRSVHAAAVRLALDPFLSVGNSLVSM 184

Query: 482 YAKCGCINDANRVFDSMHTR--DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
           YAK G + +A +VFD+      D ITWTALI+G AQNG+G+E+L+ Y  M+  G +PDY+
Sbjct: 185 YAKTGSLGEAKKVFDATRVDRCDPITWTALIVGYAQNGRGRESLEIYADMVRSGCRPDYV 244

Query: 540 TFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ 599
           TF+GLLFACSHAGL +  R +F SM   +GI PG DHYACM+DLLGR+G+L EA  LL++
Sbjct: 245 TFIGLLFACSHAGLVDAGRAHFRSMQAEHGIAPGADHYACMVDLLGRAGRLDEAMDLLNR 304

Query: 600 MVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDA 659
                DATVWKALL+ACR H + EL E AA  ++ L+P +A+PYV LSN+YS AG+W D 
Sbjct: 305 STTRLDATVWKALLAACRTHRNAELAEHAAAMVWRLDPTDAVPYVMLSNLYSRAGRWGDV 364

Query: 660 ARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYV 719
           ARVR  MK+RGI KEPGCSWV  N   H+F  EDR HP   ++Y K++E+   I+  GYV
Sbjct: 365 ARVRTSMKARGITKEPGCSWVAANGVTHLFYVEDRRHPRAAEVYRKVEEMTERIRGQGYV 424

Query: 720 PDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYI 779
            D  +AL +   EG+E GLA+HSE+LAVAFGLL +P GAPIR+FKNLRVCGDCH A+K +
Sbjct: 425 ADTAWALQDEGPEGREKGLAHHSERLAVAFGLLAVPAGAPIRVFKNLRVCGDCHAAIKMV 484

Query: 780 SAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +  Y R I+LRDSN FHH K G CSCGDYW
Sbjct: 485 AQAYGREIVLRDSNCFHHMKDGACSCGDYW 514



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 192/387 (49%), Gaps = 13/387 (3%)

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
           + P G   VA+   I+  S+ G   +A+    +MR  G  ++++T P  L + A +  R 
Sbjct: 2   VVPPG---VAYNAAISRCSRAGLHQRALALLHEMRARGHRADEYTLPPALNSAALL--RL 56

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
               +H  +L +G  A+++V +AL+D YAK     +AR + +     + VSW S++ G A
Sbjct: 57  PADALHSLLLRAGLAAHLHVANALVDAYAKLSRHGAARAVFDEMPRRDVVSWTSLLTGLA 116

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
           R   H  AL +++ M A  +  D+F   + L+  A    L   +SVH+  V+   + +  
Sbjct: 117 RSRSHDSALQVYRDMVAAGVGPDEFAVAAALSSCAGATALELGRSVHAAAVRLALDPFLS 176

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQ-DK-DVISWTSLITGCAYHGSYEEALKYFSDMRI 430
           V N+L+ MYAK G+L  A  VF+  + D+ D I+WT+LI G A +G   E+L+ ++DM  
Sbjct: 177 VGNSLVSMYAKTGSLGEAKKVFDATRVDRCDPITWTALIVGYAQNGRGRESLEIYADMVR 236

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLVLVYAKCGCI 488
           SG  PD+V    +L AC+   +++ G + H   +++    +   D+   +V +  + G +
Sbjct: 237 SGCRPDYVTFIGLLFACSHAGLVDAG-RAHFRSMQAEHGIAPGADHYACMVDLLGRAGRL 295

Query: 489 NDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           ++A  + +   TR D   W AL+  C +  +  E  +    M+ R    D + +V L   
Sbjct: 296 DEAMDLLNRSTTRLDATVWKALLAAC-RTHRNAELAEHAAAMVWRLDPTDAVPYVMLSNL 354

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGP 574
            S AG   +      SM K  GI   P
Sbjct: 355 YSRAGRWGDVARVRTSM-KARGITKEP 380



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 159/329 (48%), Gaps = 11/329 (3%)

Query: 99  FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
             +++ I   S  GL   A  L  +M+  G+R  +YTL   L   +L  L    +  H  
Sbjct: 7   VAYNAAISRCSRAGLHQRALALLHEMRARGHRADEYTLPPALNSAAL--LRLPADALHSL 64

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFK 218
            ++     +  V   LVD YAK      A  +F   P  ++ V+WT+++TG +++     
Sbjct: 65  LLRAGLAAHLHVANALVDAYAKLSRHGAARAVFDEMPR-RDVVSWTSLLTGLARSRSHDS 123

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID 278
           A++ +RDM   GV  ++F   + L++CA  +A + G  VH   +    +  + V ++L+ 
Sbjct: 124 ALQVYRDMVAAGVGPDEFAVAAALSSCAGATALELGRSVHAAAVRLALDPFLSVGNSLVS 183

Query: 279 MYAKCGDLDSARRLLEYSEID--NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           MYAK G L  A+++ + + +D  + ++W ++IVG+A+ G  +E+L ++  M     + D 
Sbjct: 184 MYAKTGSLGEAKKVFDATRVDRCDPITWTALIVGYAQNGRGRESLEIYADMVRSGCRPDY 243

Query: 337 FTYPSVLNCFA-SNIDLNNAKSVH--SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
            T+  +L  FA S+  L +A   H  S+  + G          ++D+  + G LD A  +
Sbjct: 244 VTFIGLL--FACSHAGLVDAGRAHFRSMQAEHGIAPGADHYACMVDLLGRAGRLDEAMDL 301

Query: 394 FNLMQDK-DVISWTSLITGCAYHGSYEEA 421
            N    + D   W +L+  C  H + E A
Sbjct: 302 LNRSTTRLDATVWKALLAACRTHRNAELA 330



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 112/242 (46%), Gaps = 5/242 (2%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++ AYA   R   A+ +F+E P ++  +W+SL+ G +       A +++  M   G  
Sbjct: 78  NALVDAYAKLSRHGAARAVFDEMPRRDVVSWTSLLTGLARSRSHDSALQVYRDMVAAGVG 137

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P ++ +   L  C+    L+ G   H  A++   D    V   LV MYAK   + EA+ +
Sbjct: 138 PDEFAVAAALSSCAGATALELGRSVHAAAVRLALDPFLSVGNSLVSMYAKTGSLGEAKKV 197

Query: 191 FKMFP-DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           F     D  + + WT +I GY+QNG G +++E + DM   G   +  TF  +L AC+   
Sbjct: 198 FDATRVDRCDPITWTALIVGYAQNGRGRESLEIYADMVRSGCRPDYVTFIGLLFACSHAG 257

Query: 250 ARDFG-AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS--EIDNEVSWNS 306
             D G A         G        + ++D+  + G LD A  LL  S   +D  V W +
Sbjct: 258 LVDAGRAHFRSMQAEHGIAPGADHYACMVDLLGRAGRLDEAMDLLNRSTTRLDATV-WKA 316

Query: 307 MI 308
           ++
Sbjct: 317 LL 318


>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
          Length = 751

 Score =  546 bits (1406), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 276/711 (38%), Positives = 417/711 (58%), Gaps = 37/711 (5%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  + L+++L   +  G L R  +          D N F    L+   A  + + + E L
Sbjct: 46  PPTFLLNHLLTAYAKSGRLARARR----VFDEMPDPNLFTRNALLSALAHSRLVPDMERL 101

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILTACAAVS 249
           F   P+ ++ V++  +ITG+S  G   ++++ +R + R E V   + T  +++   +A+S
Sbjct: 102 FASMPE-RDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALS 160

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE------------ 297
            R  G  VH  +L  GF A  +V S L+DMYAK G +  ARR+ +  E            
Sbjct: 161 DRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLIT 220

Query: 298 ------------------IDNE-VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
                             +D + ++W +M+ G  + G   EAL +F++M A  + ID +T
Sbjct: 221 GLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYT 280

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
           + S+L    +       K +H+ I +T +E   FV +AL+DMY+K  ++  A  VF  M 
Sbjct: 281 FGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMT 340

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
            +++ISWT++I G   +   EEA++ FS+M++ GI PD   + S++S+CA L  LE G Q
Sbjct: 341 CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQ 400

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK 518
            H + L SG    ++V N+LV +Y KCG I DA+R+FD M   D ++WTAL+ G AQ GK
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGK 460

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA 578
            KE +  +++ML  G KPD +TF+G+L ACS AGL E    YF+SM K + I P  DHY 
Sbjct: 461 AKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYT 520

Query: 579 CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM 638
           CMIDL  RSG+  EA+  + QM   PDA  W  LLS+CR+ G++E+G+ AA NL E +P 
Sbjct: 521 CMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQ 580

Query: 639 NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPL 698
           N   YV L +M++  G+W + A +R+ M+ R ++KEPGCSW++  ++VHIF ++D+ HP 
Sbjct: 581 NPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPF 640

Query: 699 RTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA 758
            + IY K++ +   + E GY PD++  LH+V +  K   +++HSEKLA+AFGL+ +PQ  
Sbjct: 641 SSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEM 700

Query: 759 PIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           PIRI KNLRVC DCH A K+IS +  R I++RD+ RFH F  G CSCGD+W
Sbjct: 701 PIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751



 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 184/616 (29%), Positives = 300/616 (48%), Gaps = 82/616 (13%)

Query: 35  PASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP 94
           P   LN  L  ++ SG +  A ++F++M D + FT N +++A A+S  + + ++LF   P
Sbjct: 47  PTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMP 106

Query: 95  FKNFFTWSSLIYGYSNYGLDIEAFELFWQ-MQLEGYRPSQYTLDNVLRLCSLKGLLQRGE 153
            ++  ++++LI G+S+ G    + +L+   ++ E  RP++ TL  ++ + S       G 
Sbjct: 107 ERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGH 166

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAK-------------------------------CK 182
             H   ++  F   AFV + LVDMYAK                               CK
Sbjct: 167 SVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCK 226

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            I +A+ LF++  D ++ + WTTM+TG +QNG   +A++ FR MR EGV  +Q+TF SIL
Sbjct: 227 MIEDAKGLFQLMVD-RDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSIL 285

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           TAC A++A + G Q+H  I  + +E NV+V SAL+DMY+KC  +  A  +       N +
Sbjct: 286 TACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNII 345

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SW +MIVG+ +    +EA+  F +M    IK DDFT  SV++  A+   L      H L 
Sbjct: 346 SWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLA 405

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           + +G   Y  V+NAL+ +Y K G+++ A  +F+ M   D +SWT+L+TG A  G  +E +
Sbjct: 406 LVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETI 465

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
             F  M ++G+ PD V    +LSAC+   ++E             GC             
Sbjct: 466 DLFEKMLVNGLKPDGVTFIGVLSACSRAGLVE------------KGCD------------ 501

Query: 483 AKCGCINDANRVFDSMHT-RDVIT----WTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
                       FDSM    D++     +T +I   +++G+ KEA +F  QM      PD
Sbjct: 502 -----------YFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQM---PHSPD 547

Query: 538 YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA---- 593
              +  LL +C   G  E  +W  E++  +      P  Y  +  +    G+  E     
Sbjct: 548 AFGWATLLSSCRLRGNMEIGKWAAENL--LETDPQNPASYVLLCSMHAAKGQWTEVAHLR 605

Query: 594 KALLDQMVGEPDATVW 609
           + + D+ V +     W
Sbjct: 606 RGMRDRQVKKEPGCSW 621


>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
          Length = 1145

 Score =  546 bits (1406), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 307/809 (37%), Positives = 444/809 (54%), Gaps = 44/809 (5%)

Query: 30  GNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKL 89
           G  V+     N  +  +  +G+I  A +LF+ M  RD  +WNTM+  Y +S  + EA+ L
Sbjct: 120 GMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNL 179

Query: 90  FNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLL 149
           F   P +N  +W+ +I GY        A+++F  M  EG  P Q  L +VL      G  
Sbjct: 180 FERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKP 239

Query: 150 QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
              E  H    KT F+ +  V T +++ Y K   + ++   F      +N   W+T+I  
Sbjct: 240 GILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAA 299

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
            SQ G    A   ++   ++ V S       +        A+    Q+H        E N
Sbjct: 300 LSQAGRIDDAFAVYQRDPLKSVPSRTSMLTGLARYGRIDDAKILFDQIH--------EPN 351

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA 329
           V   +A+I  Y +   +D A  L       N +SW  MI G+AR G  ++AL   + +H 
Sbjct: 352 VVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHR 411

Query: 330 RDIKIDDFTYPSVLNCFA-SNID-LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK---- 383
           + +     +  S    FA SNI+ L   K VHSL VK G +   +V NALI +Y K    
Sbjct: 412 KGMLPSLSSLTSSF--FACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSI 469

Query: 384 --------------------------QGNL-DCAFMVFNLMQDKDVISWTSLITGCAYHG 416
                                     Q NL D A  VFN M   DV+SWT++I+ CA   
Sbjct: 470 GSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQAD 529

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
              EA++ F  M      P+  +++ +L     L   + GQQ+H + +K G  S L V N
Sbjct: 530 QGNEAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVAN 589

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           +LV +Y KC    D+ +VFDSM  RD+ TW  +I G AQ+G G+EA++ Y  M++ G  P
Sbjct: 590 ALVSMYFKCSSA-DSLKVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLP 648

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           + +TFVGLL ACSH+GL +    +F+SM   YG+ P  +HYACM+DLLGR+G +  A+  
Sbjct: 649 NEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHF 708

Query: 597 LDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
           +  M  EPD+ +W ALL AC++H ++E+G RAA  LF +EP NA  YV LSN+YS+ G W
Sbjct: 709 IYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMW 768

Query: 657 EDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA 716
           ++ A+VRKLMK RG+ K+PGCSW++  +++H F++ D  H    +IY+ + E+  L+K  
Sbjct: 769 DEVAKVRKLMKERGVNKDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATLWELYTLLKAT 828

Query: 717 GYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAM 776
           GYVPD +F LH+++EE KE  L YHSEKLAVA+GLL  P+G PI+I KNLR+CGDCHT +
Sbjct: 829 GYVPDTDFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICGDCHTFI 888

Query: 777 KYISAVYLRHIILRDSNRFHHFKAGNCSC 805
           K++S+V  R I +RD NRFHHF+ G+CSC
Sbjct: 889 KFVSSVTKREIDVRDGNRFHHFRNGSCSC 917



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 147/545 (26%), Positives = 254/545 (46%), Gaps = 32/545 (5%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS 109
           G + EA ++F+ M  RD   WN+MI AY N+G     + L +     N  T + L+ GY+
Sbjct: 47  GRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLRTGTILLSGYA 106

Query: 110 NYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKG---LLQRGEQFHGYAIKTCFDL 166
             G   +A  +F     +G         N +  C ++     L R + F     +     
Sbjct: 107 RAGRVRDARRVF-----DGMGVRNTVAWNAMVTCYVQNGDITLAR-KLFDAMPSRDVSSW 160

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
           N  ++TG    Y   + + EA  LF+  P+ +N V+WT MI+GY       +A + FR M
Sbjct: 161 NT-MLTG----YCHSQLMEEARNLFERMPE-RNGVSWTVMISGYVLIEQHGRAWDMFRTM 214

Query: 227 RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK-CGD 285
             EG+   Q    S+L+A   +        +H  +  +GFE +V V +A+++ Y K    
Sbjct: 215 LCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNM 274

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           LDSA +  E     NE +W+++I   ++ G   +A +++++   + +     +  S+L  
Sbjct: 275 LDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVP----SRTSMLTG 330

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
            A    +++AK +   I +     +    NA+I  Y +   +D A  +FN M  ++ ISW
Sbjct: 331 LARYGRIDDAKILFDQIHEPNVVSW----NAMITGYMQNEMVDEAEDLFNRMPFRNTISW 386

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
             +I G A +G  E+AL     +   G+ P    ++S   AC+ +  LE G+QVH++ +K
Sbjct: 387 AGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVK 446

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
           +G   +  V N+L+ +Y K   I    ++FD M  +D +++ + +    QN    EA   
Sbjct: 447 AGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDV 506

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
           ++ M      PD +++  ++ AC+ A     A   F SM     + P P     +  LLG
Sbjct: 507 FNNM----PSPDVVSWTTIISACAQADQGNEAVEIFRSMLHEREL-PNP---PILTILLG 558

Query: 586 RSGKL 590
            SG L
Sbjct: 559 LSGNL 563


>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  545 bits (1405), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 295/754 (39%), Positives = 439/754 (58%), Gaps = 73/754 (9%)

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ-FHGYAIKTCFDLNAFVVTGLVDMYAKC 181
           Q+  +G     Y ++N++   +  G L+     F    +K+ F  N      L+  YAK 
Sbjct: 35  QIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNT-----LISGYAKQ 89

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
                +  L    PD  + V+WT +I GY+Q G    AI  F  M  E V  +QFT  ++
Sbjct: 90  GNFEVSRRLLYEMPDC-DPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNV 148

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           L++CAA    D G ++H  ++  G  + V V ++L++MYAKCGD   A+ + +   + N 
Sbjct: 149 LSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNI 208

Query: 302 -------------------------------VSWNSMIVGFARQGFHKEALSLFKKM-HA 329
                                          VSWNSMI G+++QG++ EAL++F KM + 
Sbjct: 209 STWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNE 268

Query: 330 RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDC 389
             +K D+FT  S+L+  A+   LN  K +H+ I++   E    V NALI MYAK G ++ 
Sbjct: 269 PSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEI 328

Query: 390 AFMV---------------------------------FNLMQDKDVISWTSLITGCAYHG 416
           A ++                                 FN ++D+DV++WT++I G   +G
Sbjct: 329 ARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNG 388

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
            + +AL+ F  M   G  P+   ++++LS  + LT+LE G+Q+HA  +K+G  S+ SV N
Sbjct: 389 LWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTN 448

Query: 477 SLVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           +L+ +YAK G IN A RVFD  +  +++++WT++IM  AQ+G GKEA+  +++ML+ G K
Sbjct: 449 ALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMK 508

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           PD+IT+VG+L AC+H GL E  R Y+  M +V+ I+P   HYACMIDL GR+G L EA  
Sbjct: 509 PDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYL 568

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
            ++ M  EPD   W +LL++C++H + +L + AA  L  ++P N+  Y+ L+N+YS  GK
Sbjct: 569 FIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGK 628

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
           WE+AA+ RKLMK RG+RKE G SW+   ++VH F  ED  HP + +IY  + EI   IK+
Sbjct: 629 WENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKK 688

Query: 716 AGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
            G++PD    LH++EEE KE  L YHSEKLA+AFGLL  P+   +RI KNLRVC DCH+A
Sbjct: 689 MGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSA 748

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +K+IS +  R II+RD+ RFHHFK G+CSC DYW
Sbjct: 749 IKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 173/589 (29%), Positives = 285/589 (48%), Gaps = 74/589 (12%)

Query: 39  LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF 98
           +N  +  ++ +G +  A  +F++M  +  F+WNT+I+ YA  G    +++L  E P  + 
Sbjct: 48  MNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDP 107

Query: 99  FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
            +W+++I GY+ +GL   A  +F +M  E   PSQ+T+ NVL  C+    L  G + H +
Sbjct: 108 VSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSF 167

Query: 159 AIKTCFDLNAFVVTGLVDMYAKC------KCIFE-------------------------A 187
            +K        V T L++MYAKC      K +F+                         A
Sbjct: 168 VVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELA 227

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE-GVESNQFTFPSILTACA 246
              F+  PD ++ V+W +MI+GYSQ GY  +A+  F  M  E  ++ + FT  SIL+ACA
Sbjct: 228 ASQFEKMPD-RDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACA 286

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN------ 300
            +   + G Q+H  IL +  E +  V +ALI MYAK G ++ AR ++E++   N      
Sbjct: 287 NLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAF 346

Query: 301 ---------------------------EVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
                                       V+W +MIVG+ + G   +AL LF+ M     +
Sbjct: 347 TSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPE 406

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
            + +T  ++L+  +S   L + K +H+  +K G      V NALI MYAK GN++ A  V
Sbjct: 407 PNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRV 466

Query: 394 FNLMQ-DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV 452
           F+L    K+++SWTS+I   A HG  +EA+  F  M   G+ PDH+    +LSAC  + +
Sbjct: 467 FDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGL 526

Query: 453 LEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALI 510
           +E G++ + +  +      +LS    ++ +Y + G + +A    +SM    D I W +L+
Sbjct: 527 VEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLL 586

Query: 511 MGCAQNGKGKEALQFYDQMLA--RGTKPDYITFVGLLFACSHAGLAENA 557
             C  +     A    +++L    G    Y+    +  AC   G  ENA
Sbjct: 587 ASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSAC---GKWENA 632



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 213/498 (42%), Gaps = 102/498 (20%)

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
           S++F F  IL     +     G  VH  I+  G    VY+ + L+  YAK G L  A  +
Sbjct: 9   SSEF-FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHV 67

Query: 293 LEYSEIDNEVSWNSMIVGFARQ-------------------------------GFHKEAL 321
            +   + +  SWN++I G+A+Q                               G    A+
Sbjct: 68  FDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAI 127

Query: 322 SLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG--------------- 366
            +F KM +  +    FT  +VL+  A+N  L+  + +HS +VK G               
Sbjct: 128 WMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMY 187

Query: 367 ------------FEGYKFVN----NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
                       F+     N    NALI +Y + G  + A   F  M D+D++SW S+I+
Sbjct: 188 AKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMIS 247

Query: 411 GCAYHGSYEEALKYFSDM-RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
           G +  G   EAL  FS M     + PD+  ++SILSACA L  L  G+Q+HA  L++   
Sbjct: 248 GYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETE 307

Query: 470 SSLSVDNSLVLVYAKCGC---------------------------------INDANRVFD 496
           +S +V N+L+ +YAK G                                  +  A  +F+
Sbjct: 308 TSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFN 367

Query: 497 SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAEN 556
            +  RDV+ WTA+I+G  QNG   +AL+ +  M+  G +P+  T   +L   S   + E+
Sbjct: 368 KLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEH 427

Query: 557 ARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSAC 616
            +    S  K  G    P     +I +  ++G +  AK + D   G+ +   W +++ A 
Sbjct: 428 GKQIHASAIKA-GESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMAL 486

Query: 617 RVHGDLELGERAANNLFE 634
             HG   LG+ A  NLFE
Sbjct: 487 AQHG---LGKEAI-NLFE 500



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 133/494 (26%), Positives = 216/494 (43%), Gaps = 100/494 (20%)

Query: 8   ILNFSLRCRSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDG 67
           +LN   +C   +I    +      +VK  S  N  +  +  SG+ + A   FEKM DRD 
Sbjct: 183 LLNMYAKCGDPVIAKVVFDRM---TVKNISTWNALISLYMQSGQFELAASQFEKMPDRDI 239

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
            +WN+MI+ Y                               S  G ++EA  +F +M  E
Sbjct: 240 VSWNSMISGY-------------------------------SQQGYNLEALAIFSKMLNE 268

Query: 128 -GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT------------------------ 162
              +P  +TL ++L  C+    L  G+Q H Y ++                         
Sbjct: 269 PSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEI 328

Query: 163 ---------CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQN 213
                      +LN    T L+D Y K   +  A  +F    D ++ VAWT MI GY QN
Sbjct: 329 ARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRD-RDVVAWTAMIVGYVQN 387

Query: 214 GYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
           G    A+E FR M  EG E N +T  ++L+  ++++  + G Q+H   + +G  +   V 
Sbjct: 388 GLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVT 447

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNE-VSWNSMIVGFARQGFHKEALSLFKKMHARDI 332
           +ALI MYAK G+++ A+R+ +      E VSW SMI+  A+ G  KEA++LF++M +  +
Sbjct: 448 NALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGM 507

Query: 333 KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA------------LIDM 380
           K D  TY  VL+              H  +V+ G + Y  +               +ID+
Sbjct: 508 KPDHITYVGVLSA-----------CTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDL 556

Query: 381 YAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD--- 436
           Y + G L  A++    M  + D I+W SL+  C  H + +  L   +  R+  I P    
Sbjct: 557 YGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNAD--LAKVAAERLLLIDPGNSG 614

Query: 437 -HVVVSSILSACAE 449
            ++ ++++ SAC +
Sbjct: 615 AYLALANVYSACGK 628



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 165/337 (48%), Gaps = 13/337 (3%)

Query: 46  FSNSGEIDEAGQLFE--KMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSS 103
           ++ SG ++ A  + E  + S+ +   + +++  Y   G ++ A+++FN+   ++   W++
Sbjct: 320 YAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTA 379

Query: 104 LIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC 163
           +I GY   GL  +A ELF  M  EG  P+ YTL  +L + S   +L+ G+Q H  AIK  
Sbjct: 380 MIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAG 439

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNH-VAWTTMITGYSQNGYGFKAIEC 222
                 V   L+ MYAK   I  A+ +F + P+GK   V+WT+MI   +Q+G G +AI  
Sbjct: 440 ESSTPSVTNALIAMYAKTGNINVAKRVFDL-PNGKKEIVSWTSMIMALAQHGLGKEAINL 498

Query: 223 FRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS-SGFEANVYVQSALIDMYA 281
           F  M   G++ +  T+  +L+AC  V   + G + +  +      E  +   + +ID+Y 
Sbjct: 499 FERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYG 558

Query: 282 KCGDLDSARRLLEYSEID-NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID---DF 337
           + G L  A   +E   I+ + ++W S++   A    HK A  L K    R + ID     
Sbjct: 559 RAGLLQEAYLFIESMPIEPDNIAWGSLL---ASCKIHKNA-DLAKVAAERLLLIDPGNSG 614

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
            Y ++ N +++     NA     L+   G    K ++
Sbjct: 615 AYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGIS 651


>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  545 bits (1404), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 295/754 (39%), Positives = 438/754 (58%), Gaps = 73/754 (9%)

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ-FHGYAIKTCFDLNAFVVTGLVDMYAKC 181
           Q+  +G     Y ++N++   +  G L+     F    +K+ F  N      L+  YAK 
Sbjct: 35  QIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNT-----LISGYAKQ 89

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
                +  L    PD  + V+WT +I GY+Q G    AI  F  M  E V  +QFT  ++
Sbjct: 90  GNFEVSRRLLYEMPDC-DPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNV 148

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           L++CAA    D G ++H  ++  G  + V V ++L++MYAKCGD   A+ + +   + N 
Sbjct: 149 LSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNI 208

Query: 302 -------------------------------VSWNSMIVGFARQGFHKEALSLFKKM-HA 329
                                          VSWNSMI G+++QG++ EAL +F KM + 
Sbjct: 209 STWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNE 268

Query: 330 RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDC 389
             +K D+FT  S+L+  A+   LN  K +H+ I++   E    V NALI MYAK G ++ 
Sbjct: 269 PSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEI 328

Query: 390 AFMV---------------------------------FNLMQDKDVISWTSLITGCAYHG 416
           A ++                                 FN ++D+DV++WT++I G   +G
Sbjct: 329 ARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNG 388

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
            + +AL+ F  M   G  P+   ++++LS  + LT+LE G+Q+HA  +K+G  S+ SV N
Sbjct: 389 LWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTN 448

Query: 477 SLVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           +L+ +YAK G IN A RVFD  +  +++++WT++IM  AQ+G GKEA+  +++ML+ G K
Sbjct: 449 ALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMK 508

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           PD+IT+VG+L AC+H GL E  R Y+  M +V+ I+P   HYACMIDL GR+G L EA  
Sbjct: 509 PDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYL 568

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
            ++ M  EPD   W +LL++C++H + +L + AA  L  ++P N+  Y+ L+N+YS  GK
Sbjct: 569 FIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGK 628

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
           WE+AA+ RKLMK RG+RKE G SW+   ++VH F  ED  HP + +IY  + EI   IK+
Sbjct: 629 WENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKK 688

Query: 716 AGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
            G++PD    LH++EEE KE  L YHSEKLA+AFGLL  P+   +RI KNLRVC DCH+A
Sbjct: 689 MGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHSA 748

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +K+IS +  R II+RD+ RFHHFK G+CSC DYW
Sbjct: 749 IKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 180/621 (28%), Positives = 296/621 (47%), Gaps = 75/621 (12%)

Query: 8   ILNFSLRCRSKIIGPARYTHNVGNSVKPASDLNRALVDF-SNSGEIDEAGQLFEKMSDRD 66
           IL  S+R +    G + +   +   +     L   L+ F + +G +  A  +F++M  + 
Sbjct: 16  ILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKS 75

Query: 67  GFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL 126
            F+WNT+I+ YA  G    +++L  E P  +  +W+++I GY+ +GL   A  +F +M  
Sbjct: 76  TFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMIS 135

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC----- 181
           E   PSQ+T+ NVL  C+    L  G + H + +K        V T L++MYAKC     
Sbjct: 136 ERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVI 195

Query: 182 -KCIFE-------------------------AEYLFKMFPDGKNHVAWTTMITGYSQNGY 215
            K +F+                         A   F+  PD ++ V+W +MI+GYSQ GY
Sbjct: 196 AKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPD-RDIVSWNSMISGYSQQGY 254

Query: 216 GFKAIECFRDMRVE-GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQS 274
             +A+  F  M  E  ++ + FT  SIL+ACA +   + G Q+H  IL +  E +  V +
Sbjct: 255 NLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGN 314

Query: 275 ALIDMYAKCGDLDSARRLLEYSEIDN---------------------------------E 301
           ALI MYAK G ++ AR ++E++   N                                  
Sbjct: 315 ALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDV 374

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           V+W +MIVG+ + G   +AL LF+ M     + + +T  ++L+  +S   L + K +H+ 
Sbjct: 375 VAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHAS 434

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEE 420
            +K G      V NALI MYAK GN++ A  VF+L    K+++SWTS+I   A HG  +E
Sbjct: 435 AIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKE 494

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLV 479
           A+  F  M   G+ PDH+    +LSAC  + ++E G++ + +  +      +LS    ++
Sbjct: 495 AINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMI 554

Query: 480 LVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQMLA--RGTKP 536
            +Y + G + +A    +SM    D I W +L+  C  +     A    +++L    G   
Sbjct: 555 DLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSG 614

Query: 537 DYITFVGLLFACSHAGLAENA 557
            Y+    +  AC   G  ENA
Sbjct: 615 AYLALANVYSAC---GKWENA 632



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 213/498 (42%), Gaps = 102/498 (20%)

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
           S++F F  IL     +     G  VH  I+  G    VY+ + L+  YAK G L  A  +
Sbjct: 9   SSEF-FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHV 67

Query: 293 LEYSEIDNEVSWNSMIVGFARQ-------------------------------GFHKEAL 321
            +   + +  SWN++I G+A+Q                               G    A+
Sbjct: 68  FDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAI 127

Query: 322 SLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG--------------- 366
            +F KM +  +    FT  +VL+  A+N  L+  + +HS +VK G               
Sbjct: 128 WMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMY 187

Query: 367 ------------FEGYKFVN----NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
                       F+     N    NALI +Y + G  + A   F  M D+D++SW S+I+
Sbjct: 188 AKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMIS 247

Query: 411 GCAYHGSYEEALKYFSDM-RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
           G +  G   EAL  FS M     + PD+  ++SILSACA L  L  G+Q+HA  L++   
Sbjct: 248 GYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETE 307

Query: 470 SSLSVDNSLVLVYAKCGC---------------------------------INDANRVFD 496
           +S +V N+L+ +YAK G                                  +  A  +F+
Sbjct: 308 TSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFN 367

Query: 497 SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAEN 556
            +  RDV+ WTA+I+G  QNG   +AL+ +  M+  G +P+  T   +L   S   + E+
Sbjct: 368 KLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEH 427

Query: 557 ARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSAC 616
            +    S  K  G    P     +I +  ++G +  AK + D   G+ +   W +++ A 
Sbjct: 428 GKQIHASAIKA-GESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMAL 486

Query: 617 RVHGDLELGERAANNLFE 634
             HG   LG+ A  NLFE
Sbjct: 487 AQHG---LGKEAI-NLFE 500



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 165/337 (48%), Gaps = 13/337 (3%)

Query: 46  FSNSGEIDEAGQLFE--KMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSS 103
           ++ SG ++ A  + E  + S+ +   + +++  Y   G ++ A+++FN+   ++   W++
Sbjct: 320 YAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTA 379

Query: 104 LIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC 163
           +I GY   GL  +A ELF  M  EG  P+ YTL  +L + S   +L+ G+Q H  AIK  
Sbjct: 380 MIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAG 439

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNH-VAWTTMITGYSQNGYGFKAIEC 222
                 V   L+ MYAK   I  A+ +F + P+GK   V+WT+MI   +Q+G G +AI  
Sbjct: 440 ESSTPSVTNALIAMYAKTGNINVAKRVFDL-PNGKKEIVSWTSMIMALAQHGLGKEAINL 498

Query: 223 FRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS-SGFEANVYVQSALIDMYA 281
           F  M   G++ +  T+  +L+AC  V   + G + +  +      E  +   + +ID+Y 
Sbjct: 499 FERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYG 558

Query: 282 KCGDLDSARRLLEYSEID-NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID---DF 337
           + G L  A   +E   I+ + ++W S++   A    HK A  L K    R + ID     
Sbjct: 559 RAGLLQEAYLFIESMPIEPDNIAWGSLL---ASCKIHKNA-DLAKVAAERLLLIDPGNSG 614

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
            Y ++ N +++     NA     L+   G    K ++
Sbjct: 615 AYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGIS 651


>gi|297720639|ref|NP_001172681.1| Os01g0884800 [Oryza sativa Japonica Group]
 gi|20161229|dbj|BAB90156.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|255673935|dbj|BAH91411.1| Os01g0884800 [Oryza sativa Japonica Group]
          Length = 517

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 267/509 (52%), Positives = 346/509 (67%), Gaps = 2/509 (0%)

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           V+ N+ I   +R G H+ AL+LF +M AR ++ D++T P +LN  A       A     L
Sbjct: 10  VACNAAISRCSRAGLHRRALALFTEMRARGLRADEYTLPPILNSAALLRAPPAAALHALL 69

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           +       +  V NAL+D YAK   L  A  VF+ M  +DV++WTSL+TG A  GS+  A
Sbjct: 70  LRAG-LASHLHVANALVDAYAKLSRLGAARAVFDEMPRRDVVTWTSLVTGLARAGSHGLA 128

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           ++ + DM  +G+  D   V+++LS+CA  T LE G+ VHA  ++SG    LSV NSLV +
Sbjct: 129 VRAYRDMVAAGVATDEFAVAAVLSSCAGSTALELGRSVHAAAVRSGHEPFLSVGNSLVSM 188

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           YAK G + DA  VFD+M +R  ITWTALI+G AQNG+G+E+L  Y  M   G +PDY+TF
Sbjct: 189 YAKTGSLRDARTVFDAMRSRCAITWTALIVGYAQNGRGRESLAVYADMARSGCRPDYVTF 248

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM- 600
           VGLLFACSHAGL +  R +F+SM   +GI PGPDHYACM+DLLGR+G+L EA  LLD+  
Sbjct: 249 VGLLFACSHAGLLDAGRAHFQSMQSEHGISPGPDHYACMVDLLGRAGRLGEAVDLLDRSP 308

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAA 660
             E DATVWKALL+ACR H +  L ERAA  ++ L+P +AMPYV LSN+YS A +W D A
Sbjct: 309 AAELDATVWKALLAACRTHRNAALAERAAGMVWRLDPTDAMPYVMLSNLYSRARRWGDVA 368

Query: 661 RVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
           RVR LM+SRGI KEPGCSWV      H+F + DR H    +IY K +E+   I+  G+VP
Sbjct: 369 RVRALMRSRGISKEPGCSWVVVAGVTHVFHAGDRDHQRAAEIYRKAEEMAARIRARGHVP 428

Query: 721 DMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYIS 780
           D  +AL +   EG+E+GLA+H E+LAVAFGLL +P  APIR++KNLRVCGDCH A+K ++
Sbjct: 429 DTEWALQDEAPEGREMGLAHHGERLAVAFGLLAVPAAAPIRVYKNLRVCGDCHAAIKMVA 488

Query: 781 AVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            VY R IILRDSN FHH K G+CSCGDYW
Sbjct: 489 EVYGREIILRDSNCFHHMKDGSCSCGDYW 517



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 171/323 (52%), Gaps = 6/323 (1%)

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
           P GK  VA    I+  S+ G   +A+  F +MR  G+ ++++T P IL + A + A    
Sbjct: 4   PGGKGLVACNAAISRCSRAGLHRRALALFTEMRARGLRADEYTLPPILNSAALLRAPPAA 63

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
           A     +L +G  ++++V +AL+D YAK   L +AR + +     + V+W S++ G AR 
Sbjct: 64  ALHAL-LLRAGLASHLHVANALVDAYAKLSRLGAARAVFDEMPRRDVVTWTSLVTGLARA 122

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
           G H  A+  ++ M A  +  D+F   +VL+  A +  L   +SVH+  V++G E +  V 
Sbjct: 123 GSHGLAVRAYRDMVAAGVATDEFAVAAVLSSCAGSTALELGRSVHAAAVRSGHEPFLSVG 182

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           N+L+ MYAK G+L  A  VF+ M+ +  I+WT+LI G A +G   E+L  ++DM  SG  
Sbjct: 183 NSLVSMYAKTGSLRDARTVFDAMRSRCAITWTALIVGYAQNGRGRESLAVYADMARSGCR 242

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLVLVYAKCGCINDAN 492
           PD+V    +L AC+   +L+ G + H   ++S    S   D+   +V +  + G + +A 
Sbjct: 243 PDYVTFVGLLFACSHAGLLDAG-RAHFQSMQSEHGISPGPDHYACMVDLLGRAGRLGEAV 301

Query: 493 RVFDSMHTR--DVITWTALIMGC 513
            + D       D   W AL+  C
Sbjct: 302 DLLDRSPAAELDATVWKALLAAC 324



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 150/325 (46%), Gaps = 9/325 (2%)

Query: 96  KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
           K     ++ I   S  GL   A  LF +M+  G R  +YTL  +L   +L          
Sbjct: 7   KGLVACNAAISRCSRAGLHRRALALFTEMRARGLRADEYTLPPILNSAALLRAPPAAALH 66

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGY 215
                      +  V   LVD YAK   +  A  +F   P  ++ V WT+++TG ++ G 
Sbjct: 67  ALLLRAGLAS-HLHVANALVDAYAKLSRLGAARAVFDEMPR-RDVVTWTSLVTGLARAGS 124

Query: 216 GFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSA 275
              A+  +RDM   GV +++F   ++L++CA  +A + G  VH   + SG E  + V ++
Sbjct: 125 HGLAVRAYRDMVAAGVATDEFAVAAVLSSCAGSTALELGRSVHAAAVRSGHEPFLSVGNS 184

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           L+ MYAK G L  AR + +       ++W ++IVG+A+ G  +E+L+++  M     + D
Sbjct: 185 LVSMYAKTGSLRDARTVFDAMRSRCAITWTALIVGYAQNGRGRESLAVYADMARSGCRPD 244

Query: 336 DFTYPSVLNCFA-SNIDLNNAKSVH--SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM 392
             T+  +L  FA S+  L +A   H  S+  + G          ++D+  + G L  A  
Sbjct: 245 YVTFVGLL--FACSHAGLLDAGRAHFQSMQSEHGISPGPDHYACMVDLLGRAGRLGEAVD 302

Query: 393 VFNL--MQDKDVISWTSLITGCAYH 415
           + +     + D   W +L+  C  H
Sbjct: 303 LLDRSPAAELDATVWKALLAACRTH 327



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 111/242 (45%), Gaps = 6/242 (2%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++ AYA   RL  A+ +F+E P ++  TW+SL+ G +  G    A   +  M   G  
Sbjct: 82  NALVDAYAKLSRLGAARAVFDEMPRRDVVTWTSLVTGLARAGSHGLAVRAYRDMVAAGVA 141

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
             ++ +  VL  C+    L+ G   H  A+++  +    V   LV MYAK   + +A  +
Sbjct: 142 TDEFAVAAVLSSCAGSTALELGRSVHAAAVRSGHEPFLSVGNSLVSMYAKTGSLRDARTV 201

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F      +  + WT +I GY+QNG G +++  + DM   G   +  TF  +L AC+    
Sbjct: 202 FDAM-RSRCAITWTALIVGYAQNGRGRESLAVYADMARSGCRPDYVTFVGLLFACSHAGL 260

Query: 251 RDFG-AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS---EIDNEVSWNS 306
            D G A         G        + ++D+  + G L  A  LL+ S   E+D  V W +
Sbjct: 261 LDAGRAHFQSMQSEHGISPGPDHYACMVDLLGRAGRLGEAVDLLDRSPAAELDATV-WKA 319

Query: 307 MI 308
           ++
Sbjct: 320 LL 321



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 5/113 (4%)

Query: 20  IGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYA 78
           +G + +   V +  +P   +  +LV  ++ +G + +A  +F+ M  R   TW  +I  YA
Sbjct: 162 LGRSVHAAAVRSGHEPFLSVGNSLVSMYAKTGSLRDARTVFDAMRSRCAITWTALIVGYA 221

Query: 79  NSGRLREAKKLFNETPFK----NFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
            +GR RE+  ++ +        ++ T+  L++  S+ GL       F  MQ E
Sbjct: 222 QNGRGRESLAVYADMARSGCRPDYVTFVGLLFACSHAGLLDAGRAHFQSMQSE 274


>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
 gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
          Length = 720

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 283/660 (42%), Positives = 410/660 (62%), Gaps = 11/660 (1%)

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
           +A     + N F    L+  YAK   I  A +LF   P   + V++ T+I  Y+  G   
Sbjct: 64  HAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQ-PDLVSFNTLINAYADRGDTL 122

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
            A+  F +MR  G+  + FTF  ++TAC   +      Q+H    SSGF++ V V+++L+
Sbjct: 123 SALSLFGEMREMGLVMDGFTFSGVITACC--NHVGLIRQLHSLAFSSGFDSYVSVKNSLL 180

Query: 278 DMYAKCGDLDSARRLLEY--SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
             Y+K G L+ A  +      E+ +EVSWNSMIV + +     +AL+L++ M  R  +ID
Sbjct: 181 TYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEID 240

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG-NLDCAFMVF 394
            FT  SVL  F+   DL+     H+  +KTGF   + V + LIDMYAK G  +  +  VF
Sbjct: 241 MFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVF 300

Query: 395 NLMQDKDVISWTSLITGCAYHGSYE-EALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
             +   D++ W ++I+G + +     EAL+ F  M+ +G  PD       +SAC+ L+  
Sbjct: 301 EEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSP 360

Query: 454 EFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMG 512
             G+Q HA+ +KS   S+ +SV+N+LV +Y+KCG + DA ++F  M   + +T  ++I G
Sbjct: 361 SQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAG 420

Query: 513 CAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKP 572
            AQ+G G E+L  ++QMLA    P  IT V +L AC+H G  E  + YF  M  ++GI+P
Sbjct: 421 YAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEP 480

Query: 573 GPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNL 632
             +HY+CMIDLLGR+GKL EA+ L+D M   P +  W ALL ACR +G++EL E+AAN  
Sbjct: 481 EAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQF 540

Query: 633 FELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISE 692
            +LEP NA+PY+ L++MYS A KWE+AAR+RKLM+ RGIRK+PGCSW+E N +VH+F++E
Sbjct: 541 LQLEPTNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAE 600

Query: 693 DRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEG---KEIGLAYHSEKLAVAF 749
           D  HP   +I+  +DE+ + +K AGYVPD+ +A    +E G   KEI LA+HSEKLAVAF
Sbjct: 601 DNSHPRIKEIHMYLDEMFVKMKRAGYVPDVRWAFVKDDETGEQEKEIMLAHHSEKLAVAF 660

Query: 750 GLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           GLL    G P+ + KNLR+CGDCH A+K++SA+  R I +RD+ RFH F+ G CSCGDYW
Sbjct: 661 GLLFTKHGEPLLVVKNLRICGDCHNAIKFMSAIARRKITVRDAYRFHCFEDGRCSCGDYW 720



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 152/508 (29%), Positives = 255/508 (50%), Gaps = 12/508 (2%)

Query: 32  SVKPASDL--NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKL 89
           S+ P+S    N  ++ +S    +  A   F +  + + F++N +IAAYA    +  A  L
Sbjct: 37  SLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQTHEPNVFSFNALIAAYAKESLIHVAHHL 96

Query: 90  FNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRL-CSLKGL 148
           F++ P  +  ++++LI  Y++ G  + A  LF +M+  G     +T   V+   C+  GL
Sbjct: 97  FDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLVMDGFTFSGVITACCNHVGL 156

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK-MFPDGKNHVAWTTMI 207
           ++   Q H  A  + FD    V   L+  Y+K   + EAE +F  M  + ++ V+W +MI
Sbjct: 157 IR---QLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMI 213

Query: 208 TGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFE 267
             Y Q+  G KA+  +RDM   G E + FT  S+LT  + V     G Q H   + +GF 
Sbjct: 214 VAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFN 273

Query: 268 ANVYVQSALIDMYAKCG-DLDSARRLLEYSEIDNEVSWNSMIVGFAR-QGFHKEALSLFK 325
            N +V S LIDMYAKCG  +  +R++ E     + V WN+MI G+++ +    EAL  F+
Sbjct: 274 KNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFR 333

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF-VNNALIDMYAKQ 384
           +M       DD ++   ++  ++    +  K  H+L +K+     +  VNNAL+ MY+K 
Sbjct: 334 QMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKC 393

Query: 385 GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
           GNL  A  +F  M   + ++  S+I G A HG   E+L  F  M  + I P  + + SIL
Sbjct: 394 GNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSIL 453

Query: 445 SACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LVLVYAKCGCINDANRVFDSM-HTRD 502
           SACA    +E G++   +     G    +   S ++ +  + G +++A R+ D+M  +  
Sbjct: 454 SACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPG 513

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQML 530
              W AL+  C + G  + A +  +Q L
Sbjct: 514 SAAWAALLGACRKYGNMELAEKAANQFL 541



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 121/386 (31%), Positives = 202/386 (52%), Gaps = 12/386 (3%)

Query: 71  NTMIAAYANSGRLREAKKLFNET--PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG 128
           N+++  Y+ +G L EA+ +FN      ++  +W+S+I  Y  +   ++A  L+  M   G
Sbjct: 177 NSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRG 236

Query: 129 YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC-IFEA 187
           +    +TL +VL   S    L  G QFH  AIKT F+ N  V +GL+DMYAKC   + E+
Sbjct: 237 FEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSES 296

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNG-YGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
             +F+    G + V W TMI+GYSQN     +A+ECFR M+  G   +  +F   ++AC+
Sbjct: 297 RKVFEEIC-GSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACS 355

Query: 247 AVSARDFGAQVHGCILSSGFEAN-VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
            +S+   G Q H   + S   +N + V +AL+ MY+KCG+L  AR+L +     N V+ N
Sbjct: 356 NLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLN 415

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           S+I G+A+ G   E+L+LF++M A  I     T  S+L+  A    +   K   +++   
Sbjct: 416 SIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDI 475

Query: 366 -GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSY---EE 420
            G E      + +ID+  + G L  A  + + M       +W +L+  C  +G+    E+
Sbjct: 476 FGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEK 535

Query: 421 ALKYFSDMRISGICPDHVVVSSILSA 446
           A   F  +  +   P +++++S+ SA
Sbjct: 536 AANQFLQLEPTNAVP-YIMLASMYSA 560



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 135/511 (26%), Positives = 226/511 (44%), Gaps = 93/511 (18%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           +F  IL +C A      G  +H   L S   ++ Y+ +  I +Y+KC  L +A      +
Sbjct: 10  SFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQT 69

Query: 297 EIDNEVSWNSMIVGFARQ-------------------------------GFHKEALSLFK 325
              N  S+N++I  +A++                               G    ALSLF 
Sbjct: 70  HEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFG 129

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           +M    + +D FT+  V+    +++ L   + +HSL   +GF+ Y  V N+L+  Y+K G
Sbjct: 130 EMREMGLVMDGFTFSGVITACCNHVGL--IRQLHSLAFSSGFDSYVSVKNSLLTYYSKNG 187

Query: 386 NLDCAFMVFNLMQD--KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSI 443
            L+ A MVFN M +  +D +SW S+I     H    +AL  + DM   G   D   ++S+
Sbjct: 188 ILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASV 247

Query: 444 LSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC-INDANRVFDSMHTRD 502
           L+  + +  L  G Q HA  +K+G   +  V + L+ +YAKCG  ++++ +VF+ +   D
Sbjct: 248 LTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSD 307

Query: 503 VITWTALIMGCAQNGK-GKEALQFYDQMLARGTKPDYITFVGLLFACS-----------H 550
           ++ W  +I G +QN +   EAL+ + QM   G  PD  +FV  + ACS           H
Sbjct: 308 LVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFH 367

Query: 551 A-------------------------GLAENARWYFESMDKVYGIKPGPDHYACMIDLL- 584
           A                         G  ++AR  F+ M         P H    ++ + 
Sbjct: 368 ALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRM---------PQHNTVTLNSII 418

Query: 585 ---GRSGKLIEAKALLDQMVG---EPDATVWKALLSACRVHGDLELGERAAN---NLFEL 635
               + G   E+  L +QM+     P +    ++LSAC   G +E G++  N   ++F +
Sbjct: 419 AGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGI 478

Query: 636 EPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
           EP  A  Y  + ++   AGK  +A R+   M
Sbjct: 479 EP-EAEHYSCMIDLLGRAGKLSEAERLIDTM 508


>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
 gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score =  543 bits (1400), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 271/741 (36%), Positives = 442/741 (59%), Gaps = 7/741 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
            +++  Y   G + E  ++F   P KN  TW+SL+ G ++  +  E   LF++M+ EG  
Sbjct: 139 TSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIW 198

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+ +T  +VL   + +G L  G++ H  ++K     + FV   L++MYAKC  + +A+ +
Sbjct: 199 PNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSV 258

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F  + + ++ V+W T++ G   N    +A++ F + R    +  Q T+ +++  CA +  
Sbjct: 259 FN-WMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQ 317

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE-IDNEVSWNSMIV 309
                Q+H C+L  GF     V +AL D Y+KCG+L  A  +   +    N VSW ++I 
Sbjct: 318 LALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIIS 377

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           G  + G    A+ LF +M    +  ++FTY ++L    S +       +H+ ++KT ++ 
Sbjct: 378 GCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSIL----PPQIHAQVIKTNYQH 433

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
             FV  AL+  Y+K G+ + A  +F +++ KDV++W+++++  A  G  E A   F+ M 
Sbjct: 434 IPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMA 493

Query: 430 ISGICPDHVVVSSILSACAELTV-LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
           I GI P+   +SS++ ACA  +  ++ G+Q HA+ +K     ++ V ++LV +Y++ G I
Sbjct: 494 IQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNI 553

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
           + A  VF+    RD+++W ++I G AQ+G   +A++ + QM A G + D +TF+ ++  C
Sbjct: 554 DSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGC 613

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           +H GL    + YF+SM + + I P  +HYACM+DL  R+GKL E  +L+  M     A V
Sbjct: 614 THNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMV 673

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           W+ LL ACRVH ++ELG+ +A+ L  LEP ++  YV LSN+Y+ AGKW++   VRKLM  
Sbjct: 674 WRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDY 733

Query: 669 RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHN 728
           R ++KE GCSW++  ++VH FI+ D+ HP+   IY K+  I+  +K+ GY P+ +F LH+
Sbjct: 734 RKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHD 793

Query: 729 VEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHII 788
           + E+ KE  L  HSE+LA+AFGL+  P G P++I KNLRVCGDCH  MK +S +  R II
Sbjct: 794 IAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREII 853

Query: 789 LRDSNRFHHFKAGNCSCGDYW 809
           +RD +RFHHF  G CSCGD+W
Sbjct: 854 MRDCSRFHHFNGGACSCGDFW 874



 Score =  234 bits (597), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 156/538 (28%), Positives = 268/538 (49%), Gaps = 9/538 (1%)

Query: 86  AKKLFNETPFKNFFTWSS-LIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCS 144
           A+   +E P ++    ++ +++ Y+  G+ +E  + F   +  G      TL  VL+ C 
Sbjct: 51  ARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACR 110

Query: 145 LKGLLQRGEQFHGYAIKTCFDLNAFVV-TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAW 203
                  GEQ H   +K   D       T LVDMY KC  + E   +F+  P  KN V W
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPK-KNVVTW 169

Query: 204 TTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS 263
           T+++TG +      + +  F  MR EG+  N FTF S+L+A A+  A D G +VH   + 
Sbjct: 170 TSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVK 229

Query: 264 SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSL 323
            G  ++V+V ++L++MYAKCG ++ A+ +  + E  + VSWN+++ G        EAL L
Sbjct: 230 FGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQL 289

Query: 324 FKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK 383
           F +  A   K+   TY +V+   A+   L  A+ +HS ++K GF     V  AL D Y+K
Sbjct: 290 FHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSK 349

Query: 384 QGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
            G L  A  +F++    ++V+SWT++I+GC  +G    A+  FS MR   + P+    S+
Sbjct: 350 CGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSA 409

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
           +L   A L++L    Q+HA  +K+       V  +L+  Y+K G   DA  +F  +  +D
Sbjct: 410 MLK--ASLSILP--PQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKD 465

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
           V+ W+A++   AQ G  + A   +++M  +G KP+  T   ++ AC+      +    F 
Sbjct: 466 VVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFH 525

Query: 563 SMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
           ++   Y         + ++ +  R G +  A+ + ++   + D   W +++S    HG
Sbjct: 526 AISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQT-DRDLVSWNSMISGYAQHG 582



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 212/392 (54%), Gaps = 5/392 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N+++  YA  G + +AK +FN    ++  +W++L+ G      ++EA +LF + +  
Sbjct: 237 FVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRAT 296

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
             + +Q T   V++LC+    L    Q H   +K  F L   V+T L D Y+KC  + +A
Sbjct: 297 MGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADA 356

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F M    +N V+WT +I+G  QNG    A+  F  MR + V  N+FT+ ++L A  +
Sbjct: 357 LNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLS 416

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           +       Q+H  ++ + ++   +V +AL+  Y+K G  + A  + +  E  + V+W++M
Sbjct: 417 I----LPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAM 472

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTG 366
           +   A+ G  + A  LF KM  + IK ++FT  SV++ C   +  ++  +  H++ +K  
Sbjct: 473 LSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYR 532

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
           +     V++AL+ MY+++GN+D A +VF    D+D++SW S+I+G A HG   +A++ F 
Sbjct: 533 YHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFR 592

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
            M  SGI  D V   +++  C    ++  GQQ
Sbjct: 593 QMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQ 624



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 35/172 (20%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           ++ ALV  +S  G ID A  +FE+ +DRD  +WN+MI+                      
Sbjct: 539 VSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMIS---------------------- 576

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                    GY+ +G  ++A E F QM+  G +    T   V+  C+  GL+  G+Q+  
Sbjct: 577 ---------GYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFD 627

Query: 158 YAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
             ++    +N  +     +VD+Y++   + E   L +  P     + W T++
Sbjct: 628 SMVRD-HKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLL 678


>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 299/704 (42%), Positives = 416/704 (59%), Gaps = 35/704 (4%)

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP--DG 197
           L L S     Q  +Q H   IKT      F ++ L++ +          Y   +F   + 
Sbjct: 36  LTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIE-FCAISPFGNLSYALLLFESIEQ 94

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
            N   W TMI G S +     AI+ +  M + GVE N +TFP +L +CA V A   G Q+
Sbjct: 95  PNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQI 154

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDL------------------------------- 286
           HG +L  G E++ +V ++LI+MYA+ G+L                               
Sbjct: 155 HGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCL 214

Query: 287 DSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCF 346
           D ARRL E   + + VSWN+MI G+A+ G  +EAL+ F++M   ++  ++ T  +VL+  
Sbjct: 215 DDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSAC 274

Query: 347 ASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWT 406
           A +  L     V S I   G      + NALIDMY+K G+LD A  +F  + +KD+ISW 
Sbjct: 275 AQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWN 334

Query: 407 SLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
            +I G ++  SY+EAL  F  M+ S + P+ V   SIL ACA L  L+ G+ +HA   K 
Sbjct: 335 VMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKK 394

Query: 467 G-GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
             G ++ S+  SL+ +YAKCG I  A +VF  M  + + +W A+I G A +G    AL+ 
Sbjct: 395 FLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALEL 454

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
           + QM   G +PD ITFVG+L ACSHAGL E  R  F SM + Y I P   HY CMIDLLG
Sbjct: 455 FRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLG 514

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ 645
           R+G   EA+AL+  M  +PD  +W +LL ACRVHG++ELGE AA +LFELEP N   YV 
Sbjct: 515 RAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVL 574

Query: 646 LSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSK 705
           LSN+Y+TAG+W+D AR+R  +  +G++K PGCS +E +S VH F+  D+ H    DIY  
Sbjct: 575 LSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKM 634

Query: 706 IDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKN 765
           +DEI  L+++AG+VPD +  L++++EE KE  L++HSEKLA+AFGL++      IRI KN
Sbjct: 635 LDEIDQLLEKAGHVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKN 694

Query: 766 LRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           LRVCG+CH+A+K IS ++ R II RD NRFHHFK G+CSC DYW
Sbjct: 695 LRVCGNCHSAIKLISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 154/513 (30%), Positives = 249/513 (48%), Gaps = 71/513 (13%)

Query: 43  LVDF---SNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           L++F   S  G +  A  LFE +   + F WNTMI   +            + +P     
Sbjct: 70  LIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNS-----------LSSSP----- 113

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
                          + A + + +M L G  P+ YT   +L+ C+  G  Q G+Q HG+ 
Sbjct: 114 ---------------VGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHV 158

Query: 160 IKTCFDLNAFVVTGLVDMYAKC-------------------------------KCIFEAE 188
           +K   + + FV T L++MYA+                                 C+ +A 
Sbjct: 159 LKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDAR 218

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
            LF+  P  ++ V+W  MI GY+Q+G   +A+  F++M+   V  N+ T  ++L+ACA  
Sbjct: 219 RLFEEIP-VRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQS 277

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
            + + G  V   I   G  +N+ + +ALIDMY+KCGDLD AR L E     + +SWN MI
Sbjct: 278 GSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMI 337

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
            G++    +KEAL+LF+KM   +++ +D T+ S+L   A    L+  K +H+ I K  F 
Sbjct: 338 GGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKK-FL 396

Query: 369 GYKFVN--NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
           G    +   +LIDMYAK GN++ A  VF  M+ K + SW ++I+G A HG    AL+ F 
Sbjct: 397 GLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFR 456

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKC 485
            MR  G  PD +    +LSAC+   ++E G+Q  +  ++    S  L     ++ +  + 
Sbjct: 457 QMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRA 516

Query: 486 GCINDANRVFDSMHTR-DVITWTALIMGCAQNG 517
           G  ++A  +  +M  + D   W +L+  C  +G
Sbjct: 517 GLFDEAEALMKNMEMKPDGAIWGSLLGACRVHG 549



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/444 (30%), Positives = 220/444 (49%), Gaps = 20/444 (4%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++ +GE+  A  +F K S RD  ++  +I  Y   G L +A++LF E P ++  +W+++I
Sbjct: 177 YAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMI 236

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            GY+  G   EA   F +M+     P++ T+  VL  C+  G L+ G     +       
Sbjct: 237 AGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLG 296

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            N  +V  L+DMY+KC  + +A  LF+   + K+ ++W  MI GYS      +A+  FR 
Sbjct: 297 SNLRLVNALIDMYSKCGDLDKARDLFEGICE-KDIISWNVMIGGYSHMNSYKEALALFRK 355

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFE-ANVYVQSALIDMYAKCG 284
           M+   VE N  TF SIL ACA + A D G  +H  I        N  + ++LIDMYAKCG
Sbjct: 356 MQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCG 415

Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
           ++++A+++    +  +  SWN+MI G A  G    AL LF++M     + DD T+  VL+
Sbjct: 416 NIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLS 475

Query: 345 C--FASNIDLNN---AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
               A  ++L     +  V    +    + Y      +ID+  + G  D A  +   M+ 
Sbjct: 476 ACSHAGLVELGRQCFSSMVEDYDISPKLQHY----GCMIDLLGRAGLFDEAEALMKNMEM 531

Query: 400 K-DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD----HVVVSSILSACAEL-TVL 453
           K D   W SL+  C  HG+ E  L  F+   +  + P+    +V++S+I +       V 
Sbjct: 532 KPDGAIWGSLLGACRVHGNVE--LGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVA 589

Query: 454 EFGQQVHAVFLKS-GGCSSLSVDN 476
               +++   +K   GCSS+ VD+
Sbjct: 590 RIRTKLNDKGMKKVPGCSSIEVDS 613



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 137/288 (47%), Gaps = 44/288 (15%)

Query: 27  HNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLRE 85
           H +G++++    L  AL+D +S  G++D+A  LFE + ++D  +WN MI  Y++    + 
Sbjct: 293 HGLGSNLR----LVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYK- 347

Query: 86  AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL 145
                                         EA  LF +MQ     P+  T  ++L  C+ 
Sbjct: 348 ------------------------------EALALFRKMQQSNVEPNDVTFVSILPACAY 377

Query: 146 KGLLQRGEQFHGYAIKTCFDL-NAFVVTGLVDMYAKCKCIFEAEYLFK-MFPDGKNHVAW 203
            G L  G+  H Y  K    L N  + T L+DMYAKC  I  A+ +F  M P  K+  +W
Sbjct: 378 LGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKP--KSLGSW 435

Query: 204 TTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS 263
             MI+G + +G+   A+E FR MR EG E +  TF  +L+AC+     + G Q    ++ 
Sbjct: 436 NAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVE 495

Query: 264 SGFEANVYVQ--SALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMI 308
             ++ +  +Q    +ID+  + G  D A  L++  E+  + + W S++
Sbjct: 496 D-YDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLL 542


>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 284/774 (36%), Positives = 430/774 (55%), Gaps = 67/774 (8%)

Query: 72  TMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRP 131
           +++  +   GR+  A++ F E  FK+ F W+ ++ GY++ G   +A +    M+L G +P
Sbjct: 230 SILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKP 289

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
            Q T + ++   +  G  +   ++               + GL D              F
Sbjct: 290 DQVTWNAIISGYAQSGQFEEASKYF------------LEMGGLKD--------------F 323

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
           K      N V+WT +I G  QNGY F+A+  FR M +EGV+ N  T  S ++AC  +S  
Sbjct: 324 K-----PNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLL 378

Query: 252 DFGAQVHG-CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
             G ++HG CI     ++++ V ++L+D YAKC  ++ ARR     +  + VSWN+M+ G
Sbjct: 379 RHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAG 438

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID------------------- 351
           +A +G H+EA+ L  +M  + I+ D  T+  ++  F    D                   
Sbjct: 439 YALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPN 498

Query: 352 ----------------LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
                           L   K +H  +++   E    V +ALI MY+   +L+ A  VF+
Sbjct: 499 TTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFS 558

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
            +  +DV+ W S+I+ CA  G    AL    +M +S +  + V + S L AC++L  L  
Sbjct: 559 ELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQ 618

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
           G+++H   ++ G  +   + NSL+ +Y +CG I  + R+FD M  RD+++W  +I     
Sbjct: 619 GKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGM 678

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
           +G G +A+  + Q    G KP++ITF  LL ACSH+GL E    YF+ M   Y + P  +
Sbjct: 679 HGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVE 738

Query: 576 HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
            YACM+DLL R+G+  E    +++M  EP+A VW +LL ACR+H + +L E AA  LFEL
Sbjct: 739 QYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFEL 798

Query: 636 EPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG 695
           EP ++  YV ++N+YS AG+WEDAA++R LMK RG+ K PGCSW+E   ++H F+  D  
Sbjct: 799 EPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTS 858

Query: 696 HPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLP 755
           HPL   I +K++ +   IKE GYVPD NF L +V+E+ KE  L  HSEK+A+AFGL++  
Sbjct: 859 HPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTT 918

Query: 756 QGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            G P+RI KNLRVCGDCH+A K+IS V  R II+RD+ RFHHF  G CSCGDYW
Sbjct: 919 AGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 972



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 165/662 (24%), Positives = 301/662 (45%), Gaps = 94/662 (14%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            QL     D   F  + ++  Y  +G + +A+++F++   +N F+W++++  Y   G   
Sbjct: 113 AQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYE 172

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           E  +LF+ M  EG RP  +    V + CS     + G+  + Y +   F+ N+ V   ++
Sbjct: 173 ETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSIL 232

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DM+ KC  +  A   F+   + K+   W  M++GY+  G   KA++C  DM++ GV+ +Q
Sbjct: 233 DMFIKCGRMDIARRFFEEI-EFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQ 291

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR-LLE 294
            T+                                   +A+I  YA+ G  + A +  LE
Sbjct: 292 VTW-----------------------------------NAIISGYAQSGQFEEASKYFLE 316

Query: 295 YSEID----NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
              +     N VSW ++I G  + G+  EALS+F+KM    +K +  T  S ++   +  
Sbjct: 317 MGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLS 376

Query: 351 DLNNAKSVHSLIVKT-GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
            L + + +H   +K    +    V N+L+D YAK  +++ A   F +++  D++SW +++
Sbjct: 377 LLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAML 436

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHV------------------------------- 438
            G A  GS+EEA++  S+M+  GI PD +                               
Sbjct: 437 AGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMD 496

Query: 439 ----VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
                +S  L+AC ++  L+ G+++H   L++    S  V ++L+ +Y+ C  +  A  V
Sbjct: 497 PNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSV 556

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
           F  + TRDV+ W ++I  CAQ+G+   AL    +M     + + +T V  L ACS     
Sbjct: 557 FSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAAL 616

Query: 555 ENARWYFESMDKVYGIKPGPDH----YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
              +   +     + I+ G D        +ID+ GR G + +++ + D M  + D   W 
Sbjct: 617 RQGKEIHQ-----FIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLM-PQRDLVSWN 670

Query: 611 ALLSACRVHGDLELGERAANNLFELEPMNAMP-YVQLSNMYST---AGKWEDAARVRKLM 666
            ++S   +HG    G  A N   +   M   P ++  +N+ S    +G  E+  +  K+M
Sbjct: 671 VMISVYGMHG---FGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMM 727

Query: 667 KS 668
           K+
Sbjct: 728 KT 729



 Score =  202 bits (513), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 150/542 (27%), Positives = 244/542 (45%), Gaps = 83/542 (15%)

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           ++L+ C     L+ G Q H   +    D+  F+ + L+++Y +  C+ +A  +F    + 
Sbjct: 94  SILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE- 152

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           +N  +WT ++  Y   G   + I+ F  M  EGV  + F FP +  AC+ +     G  V
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 212

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           +  +LS GFE N  V+ +++DM+ KCG +D ARR  E  E  +   WN M+ G+  +G  
Sbjct: 213 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF 272

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
           K+AL     M    +K D  T+                                   NA+
Sbjct: 273 KKALKCISDMKLSGVKPDQVTW-----------------------------------NAI 297

Query: 378 IDMYAKQGNLDCA---FMVFNLMQD--KDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           I  YA+ G  + A   F+    ++D   +V+SWT+LI G   +G   EAL  F  M + G
Sbjct: 298 ISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEG 357

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC-SSLSVDNSLVLVYAKCGCINDA 491
           + P+ + ++S +SAC  L++L  G+++H   +K     S L V NSLV  YAKC  +  A
Sbjct: 358 VKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVA 417

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
            R F  +   D+++W A++ G A  G  +EA++   +M  +G +PD IT+ GL+   +  
Sbjct: 418 RRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQY 477

Query: 552 GLAENARWYFESMDKVYGIKPGPDHYACMIDLLG-----RSGKLIEAKALLDQM-----V 601
           G  + A  +F+ M  + G+ P     +  +   G     + GK I    L + +     V
Sbjct: 478 GDGKAALEFFQRMHSM-GMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGV 536

Query: 602 GEP------------------------DATVWKALLSACRVHGDLELGERAANNLFELEP 637
           G                          D  VW +++SAC   G      R+ N L  L  
Sbjct: 537 GSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSG------RSVNALDLLRE 590

Query: 638 MN 639
           MN
Sbjct: 591 MN 592



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 188/423 (44%), Gaps = 37/423 (8%)

Query: 207 ITGYS------QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
           ITG+S      +NG    A      M +   +     + SIL  C  +     G QVH  
Sbjct: 55  ITGFSGGGSVHRNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQ 114

Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEA 320
           ++ +G +   ++ S L+++Y + G ++ ARR+ +     N  SW +++  +   G ++E 
Sbjct: 115 LVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEET 174

Query: 321 LSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDM 380
           + LF  M    ++ D F +P V    +   +    K V+  ++  GFEG   V  +++DM
Sbjct: 175 IKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDM 234

Query: 381 YAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVV 440
           + K G +D A   F  ++ KDV  W  +++G    G +++ALK  SDM++SG+ PD V  
Sbjct: 235 FIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTW 294

Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT 500
           ++I+S  A+    E   +    FL+ GG                                
Sbjct: 295 NAIISGYAQSGQFE---EASKYFLEMGGLKDFK--------------------------- 324

Query: 501 RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWY 560
            +V++WTALI G  QNG   EAL  + +M+  G KP+ IT    + AC++  L  + R  
Sbjct: 325 PNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREI 384

Query: 561 FESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
                KV  +         ++D   +  + +E       M+ + D   W A+L+   + G
Sbjct: 385 HGYCIKVEELDSDLLVGNSLVDYYAKC-RSVEVARRKFGMIKQTDLVSWNAMLAGYALRG 443

Query: 621 DLE 623
             E
Sbjct: 444 SHE 446



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 118/240 (49%), Gaps = 3/240 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           + +I+ Y+    L  A  +F+E   ++   W+S+I   +  G  + A +L  +M L    
Sbjct: 538 SALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVE 597

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            +  T+ + L  CS    L++G++ H + I+   D   F++  L+DMY +C  I ++  +
Sbjct: 598 VNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRI 657

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F + P  ++ V+W  MI+ Y  +G+G  A+  F+  R  G++ N  TF ++L+AC+    
Sbjct: 658 FDLMPQ-RDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGL 716

Query: 251 RDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
            + G +    + +    +  V   + ++D+ ++ G  +     +E    + N   W S++
Sbjct: 717 IEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLL 776



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 126/255 (49%), Gaps = 17/255 (6%)

Query: 415 HGSYEEALKYFSDMRISGICPDHVV--VSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
           +G    A    S M ++   PD  +   +SIL  C +L  L  G QVHA  + +G     
Sbjct: 67  NGVLNNAAMLLSSMDLTN--PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCE 124

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
            + + L+ VY + GC+ DA R+FD M  R+V +WTA++      G  +E ++ +  M+  
Sbjct: 125 FLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNE 184

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC----MIDLLGRSG 588
           G +PD+  F  +  ACS     +N R   +  D  Y +  G +  +C    ++D+  + G
Sbjct: 185 GVRPDHFVFPKVFKACSE---LKNYRVGKDVYD--YMLSIGFEGNSCVKGSILDMFIKCG 239

Query: 589 KLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANN--LFELEPMNAMPYVQL 646
           ++  A+   ++ +   D  +W  ++S     G+ +   +  ++  L  ++P + + +  +
Sbjct: 240 RMDIARRFFEE-IEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKP-DQVTWNAI 297

Query: 647 SNMYSTAGKWEDAAR 661
            + Y+ +G++E+A++
Sbjct: 298 ISGYAQSGQFEEASK 312



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 73/146 (50%), Gaps = 3/146 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D   F  N++I  Y   G +++++++F+  P ++  +W+ +I  Y  +G  ++A  LF Q
Sbjct: 632 DTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQ 691

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV--VTGLVDMYAKC 181
            +  G +P+  T  N+L  CS  GL++ G ++    +KT + ++  V     +VD+ ++ 
Sbjct: 692 FRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKM-MKTEYAMDPAVEQYACMVDLLSRA 750

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMI 207
               E     +  P   N   W +++
Sbjct: 751 GQFNETLEFIEKMPFEPNAAVWGSLL 776


>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
 gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
 gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  542 bits (1397), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 301/787 (38%), Positives = 439/787 (55%), Gaps = 51/787 (6%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKN--FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           +I+ Y + G L  A  L    P  +   + W+SLI  Y + G   +   LF  M    + 
Sbjct: 65  LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  YT   V + C     ++ GE  H  ++ T F  N FV   LV MY++C+ + +A  +
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE-GVESNQFTFPSILTACAAVS 249
           F       + V+W ++I  Y++ G    A+E F  M  E G   +  T  ++L  CA++ 
Sbjct: 185 FDEM-SVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLG 243

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
               G Q+H   ++S    N++V + L+DMYAKCG +D A  +     + + VSWN+M+ 
Sbjct: 244 THSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVA 303

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYP----------------------------- 340
           G+++ G  ++A+ LF+KM    IK+D  T+                              
Sbjct: 304 GYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKP 363

Query: 341 ------SVLNCFASNIDLNNAKSVHSLIVK-------TGFEGYKFVNNALIDMYAKQGNL 387
                 SVL+  AS   L + K +H   +K        G      V N LIDMYAK   +
Sbjct: 364 NEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKV 423

Query: 388 DCAFMVFNLM--QDKDVISWTSLITGCAYHGSYEEALKYFSDM--RISGICPDHVVVSSI 443
           D A  +F+ +  +++DV++WT +I G + HG   +AL+  S+M        P+   +S  
Sbjct: 424 DTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCA 483

Query: 444 LSACAELTVLEFGQQVHAVFLKSG-GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
           L ACA L  L  G+Q+HA  L++      L V N L+ +YAKCG I+DA  VFD+M  ++
Sbjct: 484 LVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKN 543

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
            +TWT+L+ G   +G G+EAL  +D+M   G K D +T + +L+ACSH+G+ +    YF 
Sbjct: 544 EVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFN 603

Query: 563 SMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDL 622
            M  V+G+ PGP+HYAC++DLLGR+G+L  A  L+++M  EP   VW A LS CR+HG +
Sbjct: 604 RMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKV 663

Query: 623 ELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVET 682
           ELGE AA  + EL   +   Y  LSN+Y+ AG+W+D  R+R LM+ +G++K PGCSWVE 
Sbjct: 664 ELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEG 723

Query: 683 NSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHS 742
                 F   D+ HP   +IY  + + M  IK+ GYVP+  FALH+V++E K+  L  HS
Sbjct: 724 IKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHS 783

Query: 743 EKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGN 802
           EKLA+A+G+LT PQGA IRI KNLRVCGDCHTA  Y+S +    IILRDS+RFHHFK G+
Sbjct: 784 EKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGS 843

Query: 803 CSCGDYW 809
           CSC  YW
Sbjct: 844 CSCKGYW 850



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 148/427 (34%), Positives = 220/427 (51%), Gaps = 32/427 (7%)

Query: 43  LVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF---NETPFK-N 97
           LVD ++  G +DEA  +F  MS +D  +WN M+A Y+  GR  +A +LF    E   K +
Sbjct: 270 LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 329

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
             TWS+ I GY+  GL  EA  +  QM   G +P++ TL +VL  C+  G L  G++ H 
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 389

Query: 158 YAIKTCFDLNA-------FVVTGLVDMYAKCKCIFEAEYLF-KMFPDGKNHVAWTTMITG 209
           YAIK   DL          V+  L+DMYAKCK +  A  +F  + P  ++ V WT MI G
Sbjct: 390 YAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGG 449

Query: 210 YSQNGYGFKAIECFRDMRVEGVES--NQFTFPSILTACAAVSARDFGAQVHGCILSSGFE 267
           YSQ+G   KA+E   +M  E  ++  N FT    L ACA+++A   G Q+H   L +   
Sbjct: 450 YSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQN 509

Query: 268 A-NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK 326
           A  ++V + LIDMYAKCG +  AR + +     NEV+W S++ G+   G+ +EAL +F +
Sbjct: 510 AVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDE 569

Query: 327 MHARDIKIDDFTYPSVL-NCFASN-ID-----LNNAKSVHSLIVKTGFEGYKFVNNALID 379
           M     K+D  T   VL  C  S  ID      N  K+V    V  G E Y      L+D
Sbjct: 570 MRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFG--VSPGPEHYA----CLVD 623

Query: 380 MYAKQGNLDCAFMVFNLM-QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
           +  + G L+ A  +   M  +   + W + ++ C  HG  E  L  ++  +I+ +  +H 
Sbjct: 624 LLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVE--LGEYAAEKITELASNHD 681

Query: 439 VVSSILS 445
              ++LS
Sbjct: 682 GSYTLLS 688



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 157/504 (31%), Positives = 243/504 (48%), Gaps = 57/504 (11%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N ++A Y+    L +A+K+F+E    +  +W+S+I  Y+  G    A E+F +M  E
Sbjct: 163 FVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNE 222

Query: 128 -GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
            G RP   TL NVL  C+  G    G+Q H +A+ +    N FV   LVDMYAKC  + E
Sbjct: 223 FGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDE 282

Query: 187 AEYLF----------------------------KMFPDGKNH------VAWTTMITGYSQ 212
           A  +F                            ++F   +        V W+  I+GY+Q
Sbjct: 283 ANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQ 342

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC--------ILSS 264
            G G++A+   R M   G++ N+ T  S+L+ CA+V A   G ++H C        +  +
Sbjct: 343 RGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH-CYAIKYPIDLRKN 401

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLE--YSEIDNEVSWNSMIVGFARQGFHKEALS 322
           G      V + LIDMYAKC  +D+AR + +    +  + V+W  MI G+++ G   +AL 
Sbjct: 402 GHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALE 461

Query: 323 LFKKMHARD--IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK-FVNNALID 379
           L  +M   D   + + FT    L   AS   L   K +H+  ++        FV+N LID
Sbjct: 462 LLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLID 521

Query: 380 MYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVV 439
           MYAK G++  A +VF+ M  K+ ++WTSL+TG   HG  EEAL  F +MR  G   D V 
Sbjct: 522 MYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVT 581

Query: 440 VSSILSACAELTV----LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           +  +L AC+   +    +E+  ++  VF  S G    +    LV +  + G +N A R+ 
Sbjct: 582 LLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYAC---LVDLLGRAGRLNAALRLI 638

Query: 496 DSMHTR-DVITWTALIMGCAQNGK 518
           + M      + W A +  C  +GK
Sbjct: 639 EEMPMEPPPVVWVAFLSCCRIHGK 662


>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
 gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
          Length = 1175

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 289/754 (38%), Positives = 425/754 (56%), Gaps = 8/754 (1%)

Query: 20  IGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGF-----TWNTMI 74
           +G  R  H  G  V P   +  +++      E+   G+L      + GF       N +I
Sbjct: 128 LGLYRQMHRAG--VVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVI 185

Query: 75  AAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQY 134
             Y   G  R A+++F + P ++  T+++LI G++  G    A E+F +MQ  G  P   
Sbjct: 186 TLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCV 245

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
           T+ ++L  C+  G LQ+G Q H Y  K     +  +   L+D+Y KC  +  A  +F   
Sbjct: 246 TISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNS- 304

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
            D  N V W  M+  + Q     K+ E F  M+  G+  NQFT+P IL  C      D G
Sbjct: 305 SDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLG 364

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
            Q+H   + +GFE+++YV   LIDMY+K G L+ ARR+LE  +  + VSW SMI G+ + 
Sbjct: 365 EQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQH 424

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
              K+AL+ FK+M    I  D+    S ++  A    +     +H+ I  +G+ G   + 
Sbjct: 425 ECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIW 484

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           NAL+++YA+ G +  AF  F  ++ KD I+W  L++G A  G +EEALK F  M  SG+ 
Sbjct: 485 NALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVK 544

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
            +     S LSA A L  ++ G+Q+HA  +K+G      V N+L+ +Y KCG   DA   
Sbjct: 545 HNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKME 604

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
           F  M  R+ ++W  +I  C+Q+G+G EAL  +DQM   G KP+ +TF+G+L ACSH GL 
Sbjct: 605 FSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLV 664

Query: 555 ENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
           E    YF+SM   YGI+P PDHYAC+ID+ GR+G+L  AK  +++M    DA VW+ LLS
Sbjct: 665 EEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLS 724

Query: 615 ACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
           AC+VH ++E+GE AA +L ELEP ++  YV LSN Y+   KW +  +VRK+M+ RG+RKE
Sbjct: 725 ACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKE 784

Query: 675 PGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGK 734
           PG SW+E  + VH F   DR HPL   IY+ +  I   + + GY  +     H+ E+EG+
Sbjct: 785 PGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGR 844

Query: 735 EIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRV 768
           +     HSEKLAV FGL++LP   P+R+ KNLRV
Sbjct: 845 DPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV 878



 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 178/550 (32%), Positives = 299/550 (54%), Gaps = 3/550 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +I  Y+ +G +  A+++F E   ++  +W +++ GY+  GL  EA  L+ QM   G  
Sbjct: 81  NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVV 140

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+ Y L +VL  C+   L  +G   H    K  F    FV   ++ +Y +C     AE +
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P  ++ V + T+I+G++Q G+G  A+E F +M+  G+  +  T  S+L ACA++  
Sbjct: 201 FCDMPH-RDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGD 259

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              G Q+H  +  +G  ++  ++ +L+D+Y KCGD+++A  +   S+  N V WN M+V 
Sbjct: 260 LQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVA 319

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           F +     ++  LF +M A  I+ + FTYP +L       +++  + +HSL VKTGFE  
Sbjct: 320 FGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESD 379

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
            +V+  LIDMY+K G L+ A  V  ++++KDV+SWTS+I G   H   ++AL  F +M+ 
Sbjct: 380 MYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQK 439

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
            GI PD++ ++S +S CA +  +  G Q+HA    SG    +S+ N+LV +YA+CG I +
Sbjct: 440 CGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIRE 499

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           A   F+ +  +D ITW  L+ G AQ+G  +EAL+ + +M   G K +  TFV  L A ++
Sbjct: 500 AFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASAN 559

Query: 551 AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
               +  +     + K  G     +    +I L G+ G   +AK    +M  E +   W 
Sbjct: 560 LAEIKQGKQIHARVIKT-GHSFETEVGNALISLYGKCGSFEDAKMEFSEM-SERNEVSWN 617

Query: 611 ALLSACRVHG 620
            ++++C  HG
Sbjct: 618 TIITSCSQHG 627



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 231/482 (47%), Gaps = 14/482 (2%)

Query: 140 LRLCSLKGLL-QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           LR C   G   Q   + H  A+         V   L+D+Y+K   +  A  +F+     +
Sbjct: 48  LRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL-SAR 106

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           ++V+W  M++GY+QNG G +A+  +R M   GV    +   S+L++C        G  +H
Sbjct: 107 DNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIH 166

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
                 GF + ++V +A+I +Y +CG    A R+       + V++N++I G A+ G  +
Sbjct: 167 AQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGE 226

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
            AL +F++M    +  D  T  S+L   AS  DL     +HS + K G      +  +L+
Sbjct: 227 HALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLL 286

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
           D+Y K G+++ A ++FN     +V+ W  ++          ++ + F  M+ +GI P+  
Sbjct: 287 DLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQF 346

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
               IL  C     ++ G+Q+H++ +K+G  S + V   L+ +Y+K G +  A RV + +
Sbjct: 347 TYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEML 406

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS-----HAGL 553
             +DV++WT++I G  Q+   K+AL  + +M   G  PD I     +  C+       GL
Sbjct: 407 KEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGL 466

Query: 554 AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
             +AR Y      V G       +  +++L  R G++ EA +  ++ +   D   W  L+
Sbjct: 467 QIHARIY------VSGYSGDVSIWNALVNLYARCGRIREAFSSFEE-IEHKDEITWNGLV 519

Query: 614 SA 615
           S 
Sbjct: 520 SG 521


>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 296/748 (39%), Positives = 440/748 (58%), Gaps = 8/748 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N ++  Y + G L +A KLF+E P  N  ++ +L  G+S       A  L  ++ 
Sbjct: 37  DLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLF 96

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            EGY  +Q+    +L+L     L       H Y  K     +AFV T L+D Y+ C  + 
Sbjct: 97  REGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVD 156

Query: 186 EAEYLFKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            A  +F    DG   K+ V+WT M+  Y++N     ++  F  MR+ G   N FT  + L
Sbjct: 157 AARQVF----DGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAAL 212

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
            +C  + A   G  VHGC L   ++ ++YV  AL+++Y K G++  A++  E    D+ +
Sbjct: 213 KSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLI 272

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKI-DDFTYPSVLNCFASNIDLNNAKSVHSL 361
            W+ MI  +A+    KEAL LF +M    + + ++FT+ SVL   AS + LN    +HS 
Sbjct: 273 PWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSC 332

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           ++K G +   FV+NAL+D+YAK G ++ +  +F    +K+ ++W ++I G    G  E+A
Sbjct: 333 VLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKA 392

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           L  FS+M    I P  V  SS+L A A L  LE G+Q+H++ +K+       V NSL+ +
Sbjct: 393 LNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDM 452

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           YAKCG I+DA   FD M  +D ++W ALI G + +G G EAL  +D M    +KP+ +TF
Sbjct: 453 YAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTF 512

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
           VG+L ACS+AGL +  R +F+SM + YGI+P  +HY CM+ LLGRSG+  EA  L+ ++ 
Sbjct: 513 VGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIP 572

Query: 602 GEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
            +P   VW+ALL AC +H +L+LG+  A  + E+EP +   +V LSNMY+TA +W++ A 
Sbjct: 573 FQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAY 632

Query: 662 VRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPD 721
           VRK MK + ++KEPG SWVE    VH F   D  HP    I++ ++ +    ++AGYVPD
Sbjct: 633 VRKNMKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYKKTRDAGYVPD 692

Query: 722 MNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISA 781
            +  L +VE++ KE  L  HSE+LA+AFGL+ +P G  IRI KNLR+C DCH  +K +S 
Sbjct: 693 CSVVLLDVEDDEKERLLWMHSERLALAFGLIQIPSGCSIRIIKNLRICVDCHAVIKLVSK 752

Query: 782 VYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +  R I++RD NRFHHF+ G CSCGDYW
Sbjct: 753 IVQREIVIRDINRFHHFRQGVCSCGDYW 780



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/358 (32%), Positives = 181/358 (50%), Gaps = 10/358 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           DRD +    ++  Y  SG + EA++ F E P  +   WS +I  Y+      EA ELF +
Sbjct: 237 DRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCR 296

Query: 124 M-QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           M Q     P+ +T  +VL+ C+   LL  G Q H   +K   D N FV   L+D+YAKC 
Sbjct: 297 MRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCG 356

Query: 183 CIFEAEYLFKMFPDG--KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
              E E   K+F     KN VAW T+I GY Q G G KA+  F +M    ++  + T+ S
Sbjct: 357 ---EIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSS 413

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           +L A A++ A + G Q+H   + + +  +  V ++LIDMYAKCG +D AR   +  +  +
Sbjct: 414 VLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQD 473

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH- 359
           EVSWN++I G++  G   EAL+LF  M   + K +  T+  VL+   SN  L +    H 
Sbjct: 474 EVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSA-CSNAGLLDKGRAHF 532

Query: 360 -SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYH 415
            S++   G E        ++ +  + G  D A  ++  +     V+ W +L+  C  H
Sbjct: 533 KSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIH 590



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 191/399 (47%), Gaps = 8/399 (2%)

Query: 247 AVSARD--FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           A+  RD   G  +H  IL  G   +++ Q+ L++ Y   G L+ A +L +   + N VS+
Sbjct: 13  AIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSF 72

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
            ++  GF+R    + A  L  ++     +++ F + ++L    S    +   SVH+ + K
Sbjct: 73  VTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYK 132

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            G +   FV  ALID Y+  GN+D A  VF+ +  KD++SWT ++   A +  +E++L  
Sbjct: 133 LGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLL 192

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           F  MRI G  P++  +S+ L +C  L   + G+ VH   LK      L V  +L+ +Y K
Sbjct: 193 FCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTK 252

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG-TKPDYITFVG 543
            G I +A + F+ M   D+I W+ +I   AQ+ K KEAL+ + +M       P+  TF  
Sbjct: 253 SGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFAS 312

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           +L AC+   L          + KV G+         ++D+  + G+ IE    L     E
Sbjct: 313 VLQACASLVLLNLGNQIHSCVLKV-GLDSNVFVSNALMDVYAKCGE-IENSVKLFTGSTE 370

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
            +   W  ++      GD   GE+A N    +  ++  P
Sbjct: 371 KNEVAWNTIIVGYVQLGD---GEKALNLFSNMLGLDIQP 406



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 135/287 (47%), Gaps = 14/287 (4%)

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
           +D  +Y ++L     N D N  KS+H  I+K G     F  N L++ Y   G L+ A  +
Sbjct: 1   MDSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKL 60

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           F+ M   + +S+ +L  G +    ++ A +    +   G   +  V +++L     + + 
Sbjct: 61  FDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLA 120

Query: 454 EFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC 513
           +    VHA   K G  +   V  +L+  Y+ CG ++ A +VFD ++ +D+++WT ++   
Sbjct: 121 DTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACY 180

Query: 514 AQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG---- 569
           A+N   +++L  + QM   G +P+  T    L +C       N    F+    V+G    
Sbjct: 181 AENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSC-------NGLEAFKVGKSVHGCALK 233

Query: 570 IKPGPDHYA--CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
           +    D Y    +++L  +SG++ EA+   ++M  + D   W  ++S
Sbjct: 234 VCYDRDLYVGIALLELYTKSGEIAEAQQFFEEM-PKDDLIPWSLMIS 279



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 10/151 (6%)

Query: 25  YTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQ-----LFEKMSDRDGFTWNTMIAAYAN 79
           +++ +G  ++P      +++  S S    E G+       + M ++D    N++I  YA 
Sbjct: 396 FSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAK 455

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
            GR+ +A+  F++   ++  +W++LI GYS +GL +EA  LF  MQ    +P++ T   V
Sbjct: 456 CGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGV 515

Query: 140 LRLCSLKGLLQRGE-----QFHGYAIKTCFD 165
           L  CS  GLL +G          Y I+ C +
Sbjct: 516 LSACSNAGLLDKGRAHFKSMLQDYGIEPCIE 546


>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
          Length = 787

 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 307/815 (37%), Positives = 453/815 (55%), Gaps = 48/815 (5%)

Query: 8   ILNFSLRCRSKIIGPARYTHNVGNSVKPASDLN-----RALVDFSNSGEIDEAGQLFEKM 62
           ++ FS R  S  +  A+ T      V P S+ N      AL D     E      L  ++
Sbjct: 8   LIRFSRRGFS--VQSAKLTQEFVGHVSP-SEFNSHAYANALQDCIQKDEPSRGKGLHCEI 64

Query: 63  SDRDG----FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAF 118
             R G    F WN ++  Y  S  L +A KLF+E P +N  ++ +LI GY+     +EA 
Sbjct: 65  LKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAI 124

Query: 119 ELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMY 178
           ELF ++  EG+  + +    +L+L       + G   H    K   + NAFV T L+D Y
Sbjct: 125 ELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALIDAY 184

Query: 179 AKCKCIFEAEYLFKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           + C  +  A  +F    DG   K+ V+WT M+T +++N    +A++ F  MR+ G + N 
Sbjct: 185 SVCGRVDVAREVF----DGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNN 240

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
           FTF S+  AC  + A D G  VHGC L S +E ++YV  AL+D+Y K GD+D AR   E 
Sbjct: 241 FTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEE 300

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               + + W+ MI  +A+    KEA+ +F +M    +  + FT+ SVL   A+   LN  
Sbjct: 301 IPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLG 360

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAY 414
             +H  ++K G     FV+NAL+D+YAK G ++ +  +F     + DV  W ++I G   
Sbjct: 361 NQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQ 420

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
            G  E+AL+ F +M    +    V  SS L ACA L  LE G Q+H++ +K+     + V
Sbjct: 421 LGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVV 480

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
            N+L+ +YAKCG I DA  VFD M+ +D ++W A+I G + +G                 
Sbjct: 481 TNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHG----------------- 523

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAK 594
                       AC++AGL +  + YF SM + +GI+P  +HY CM+ LLGR G L +A 
Sbjct: 524 -----------LACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAV 572

Query: 595 ALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAG 654
            L+D++  +P   VW+ALL AC +H D+ELG  +A ++ E+EP +   +V LSNMY+TA 
Sbjct: 573 KLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQHVLEMEPQDKATHVLLSNMYATAK 632

Query: 655 KWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIK 714
           +W++ A VRK MK +G++KEPG SW+E+   VH F   D  HP    I   ++ + +  K
Sbjct: 633 RWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTK 692

Query: 715 EAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHT 774
           +AGY+P+ N  L +VE+E KE  L  HSE+LA++FG++  P G+PIRI KNLR+C DCH 
Sbjct: 693 KAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHA 752

Query: 775 AMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           A+K IS V  R I++RD NRFHHF+ G CSCGDYW
Sbjct: 753 AIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 787


>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1176

 Score =  541 bits (1394), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 289/754 (38%), Positives = 425/754 (56%), Gaps = 8/754 (1%)

Query: 20  IGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGF-----TWNTMI 74
           +G  R  H  G  V P   +  +++      E+   G+L      + GF       N +I
Sbjct: 128 LGLYRQMHRAG--VVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVI 185

Query: 75  AAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQY 134
             Y   G  R A+++F + P ++  T+++LI G++  G    A E+F +MQ  G  P   
Sbjct: 186 TLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCV 245

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
           T+ ++L  C+  G LQ+G Q H Y  K     +  +   L+D+Y KC  +  A  +F   
Sbjct: 246 TISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNS- 304

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
            D  N V W  M+  + Q     K+ E F  M+  G+  NQFT+P IL  C      D G
Sbjct: 305 SDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLG 364

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
            Q+H   + +GFE+++YV   LIDMY+K G L+ ARR+LE  +  + VSW SMI G+ + 
Sbjct: 365 EQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQH 424

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
              K+AL+ FK+M    I  D+    S ++  A    +     +H+ I  +G+ G   + 
Sbjct: 425 ECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIW 484

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           NAL+++YA+ G +  AF  F  ++ KD I+W  L++G A  G +EEALK F  M  SG+ 
Sbjct: 485 NALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVK 544

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
            +     S LSA A L  ++ G+Q+HA  +K+G      V N+L+ +Y KCG   DA   
Sbjct: 545 HNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKME 604

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
           F  M  R+ ++W  +I  C+Q+G+G EAL  +DQM   G KP+ +TF+G+L ACSH GL 
Sbjct: 605 FSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLV 664

Query: 555 ENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
           E    YF+SM   YGI+P PDHYAC+ID+ GR+G+L  AK  +++M    DA VW+ LLS
Sbjct: 665 EEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLS 724

Query: 615 ACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
           AC+VH ++E+GE AA +L ELEP ++  YV LSN Y+   KW +  +VRK+M+ RG+RKE
Sbjct: 725 ACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKE 784

Query: 675 PGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGK 734
           PG SW+E  + VH F   DR HPL   IY+ +  I   + + GY  +     H+ E+EG+
Sbjct: 785 PGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGR 844

Query: 735 EIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRV 768
           +     HSEKLAV FGL++LP   P+R+ KNLRV
Sbjct: 845 DPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV 878



 Score =  318 bits (815), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 178/550 (32%), Positives = 299/550 (54%), Gaps = 3/550 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +I  Y+ +G +  A+++F E   ++  +W +++ GY+  GL  EA  L+ QM   G  
Sbjct: 81  NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVV 140

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+ Y L +VL  C+   L  +G   H    K  F    FV   ++ +Y +C     AE +
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P  ++ V + T+I+G++Q G+G  A+E F +M+  G+  +  T  S+L ACA++  
Sbjct: 201 FCDMPH-RDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGD 259

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              G Q+H  +  +G  ++  ++ +L+D+Y KCGD+++A  +   S+  N V WN M+V 
Sbjct: 260 LQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVA 319

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           F +     ++  LF +M A  I+ + FTYP +L       +++  + +HSL VKTGFE  
Sbjct: 320 FGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESD 379

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
            +V+  LIDMY+K G L+ A  V  ++++KDV+SWTS+I G   H   ++AL  F +M+ 
Sbjct: 380 MYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQK 439

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
            GI PD++ ++S +S CA +  +  G Q+HA    SG    +S+ N+LV +YA+CG I +
Sbjct: 440 CGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIRE 499

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           A   F+ +  +D ITW  L+ G AQ+G  +EAL+ + +M   G K +  TFV  L A ++
Sbjct: 500 AFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASAN 559

Query: 551 AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
               +  +     + K  G     +    +I L G+ G   +AK    +M  E +   W 
Sbjct: 560 LAEIKQGKQIHARVIKT-GHSFETEVGNALISLYGKCGSFEDAKMEFSEM-SERNEVSWN 617

Query: 611 ALLSACRVHG 620
            ++++C  HG
Sbjct: 618 TIITSCSQHG 627



 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 231/482 (47%), Gaps = 14/482 (2%)

Query: 140 LRLCSLKGLL-QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           LR C   G   Q   + H  A+         V   L+D+Y+K   +  A  +F+     +
Sbjct: 48  LRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL-SAR 106

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           ++V+W  M++GY+QNG G +A+  +R M   GV    +   S+L++C        G  +H
Sbjct: 107 DNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIH 166

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
                 GF + ++V +A+I +Y +CG    A R+       + V++N++I G A+ G  +
Sbjct: 167 AQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGE 226

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
            AL +F++M    +  D  T  S+L   AS  DL     +HS + K G      +  +L+
Sbjct: 227 HALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLL 286

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
           D+Y K G+++ A ++FN     +V+ W  ++          ++ + F  M+ +GI P+  
Sbjct: 287 DLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQF 346

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
               IL  C     ++ G+Q+H++ +K+G  S + V   L+ +Y+K G +  A RV + +
Sbjct: 347 TYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEML 406

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS-----HAGL 553
             +DV++WT++I G  Q+   K+AL  + +M   G  PD I     +  C+       GL
Sbjct: 407 KEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGL 466

Query: 554 AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
             +AR Y      V G       +  +++L  R G++ EA +  ++ +   D   W  L+
Sbjct: 467 QIHARIY------VSGYSGDVSIWNALVNLYARCGRIREAFSSFEE-IEHKDEITWNGLV 519

Query: 614 SA 615
           S 
Sbjct: 520 SG 521


>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 809

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 284/737 (38%), Positives = 430/737 (58%), Gaps = 2/737 (0%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +++ +   G + EA ++F     K    + +++ G++      +A + F +M+ +   P 
Sbjct: 75  LVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPV 134

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
            Y    +L++C  +  L+ G++ HG  +K+ F L+ F +TGL +MYAKC+ + EA  +F 
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFD 194

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
             P+ ++ V+W T++ GYSQNG    A+E    M  E ++ +  T  S+L A +A+    
Sbjct: 195 RMPE-RDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIR 253

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G ++HG  + +GF++ V + +AL+DMYAKCG L +AR L +     N VSWNSMI  + 
Sbjct: 254 IGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYV 313

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
           +    KEA+ +F+KM    +K  D +    L+  A   DL   + +H L V+   +    
Sbjct: 314 QNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVS 373

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           V N+LI MY K   +D A  +F  +Q + ++SW ++I G A +G   EAL YFS M+   
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQART 433

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
           + PD     S+++A AEL++    + +H V +++    ++ V  +LV +YAKCG I  A 
Sbjct: 434 VKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIAR 493

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
            +FD M  R V TW A+I G   +G GK AL+ +++M     +P+ +TF+ ++ ACSH+G
Sbjct: 494 LIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSG 553

Query: 553 LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
           L E     F  M + Y I+P  DHY  M+DLLGR+G+L EA   + QM  +P   V+ A+
Sbjct: 554 LVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAM 613

Query: 613 LSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIR 672
           L AC++H ++   E+ A  LFEL P +   +V L+N+Y  A  WE   +VR  M  +G+R
Sbjct: 614 LGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLR 673

Query: 673 KEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEE 732
           K PGCS VE  ++VH F S    HP    IY+ +++++  IKEAGYVPD N  L  +E++
Sbjct: 674 KTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKEAGYVPDTNLIL-GLEDD 732

Query: 733 GKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDS 792
            KE  L+ HSEKLA++FGLL    G  I + KNLRVC DCH A KYIS V  R II+RD 
Sbjct: 733 VKEQLLSSHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIIVRDM 792

Query: 793 NRFHHFKAGNCSCGDYW 809
            RFHHFK G CSCGDYW
Sbjct: 793 QRFHHFKNGACSCGDYW 809



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 147/455 (32%), Positives = 244/455 (53%), Gaps = 10/455 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F    +   YA   ++ EA+K+F+  P ++  +W++++ GYS  G+   A E+   M 
Sbjct: 169 DLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMC 228

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            E  +PS  T+ +VL   S   L++ G++ HGYA++  FD    + T LVDMYAKC  + 
Sbjct: 229 EENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLK 288

Query: 186 EAEYLFKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            A  LF    DG   +N V+W +MI  Y QN    +A+  F+ M  EGV+    +    L
Sbjct: 289 TARLLF----DGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGAL 344

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
            ACA +   + G  +H   +    + NV V ++LI MY KC ++D+A  +    +    V
Sbjct: 345 HACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIV 404

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SWN+MI+GFA+ G   EAL+ F +M AR +K D FTY SV+   A     ++AK +H ++
Sbjct: 405 SWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVV 464

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           ++   +   FV  AL+DMYAK G +  A ++F++M ++ V +W ++I G   HG  + AL
Sbjct: 465 MRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAAL 524

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLVL 480
           + F +M+   I P+ V   S++SAC+   ++E G +   + +K       S+D+  ++V 
Sbjct: 525 ELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHM-MKENYSIEPSMDHYGAMVD 583

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
           +  + G +N+A      M  +  +     ++G  Q
Sbjct: 584 LLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQ 618



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 169/329 (51%), Gaps = 1/329 (0%)

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           + +N +  P+ L      S ++    +   I  +G       Q+ L+ ++ + G +D A 
Sbjct: 31  IPANVYEHPAALLLERCSSLKEL-RHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAA 89

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
           R+ E  +    V + +M+ GFA+     +AL  F +M   +++   + +  +L       
Sbjct: 90  RVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEA 149

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           +L   K +H L+VK+GF    F    L +MYAK   +  A  VF+ M ++D++SW +++ 
Sbjct: 150 ELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVA 209

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
           G + +G    AL+  + M    + P  + + S+L A + L ++  G+++H   +++G  S
Sbjct: 210 GYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDS 269

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
            +++  +LV +YAKCG +  A  +FD M  R+V++W ++I    QN   KEA+  + +ML
Sbjct: 270 LVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKML 329

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARW 559
             G KP  ++ +G L AC+  G  E  R+
Sbjct: 330 DEGVKPTDVSVMGALHACADLGDLERGRF 358



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 118/242 (48%), Gaps = 7/242 (2%)

Query: 54  EAGQLFEKMS-----DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY 108
           E G+   K+S     DR+    N++I+ Y     +  A  +F +   +   +W+++I G+
Sbjct: 354 ERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGF 413

Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA 168
           +  G  IEA   F QMQ    +P  +T  +V+   +   +    +  HG  ++ C D N 
Sbjct: 414 AQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNV 473

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
           FV T LVDMYAKC  I  A  +F M  + ++   W  MI GY  +G G  A+E F +M+ 
Sbjct: 474 FVTTALVDMYAKCGAIMIARLIFDMMSE-RHVTTWNAMIDGYGTHGIGKAALELFEEMQK 532

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQ-VHGCILSSGFEANVYVQSALIDMYAKCGDLD 287
             +  N  TF S+++AC+     + G +  H    +   E ++    A++D+  + G L+
Sbjct: 533 GTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLN 592

Query: 288 SA 289
            A
Sbjct: 593 EA 594


>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 270/741 (36%), Positives = 441/741 (59%), Gaps = 7/741 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
            +++  Y   G + E  ++F   P KN  TW+SL+ G ++  +  E   LF++M+ EG  
Sbjct: 139 TSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIW 198

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+ +T  +VL   + +G L  G++ H  ++K     + FV   L++MYAKC  + +A+ +
Sbjct: 199 PNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSV 258

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F  + + ++ V+W T++ G   N    +A++ F + R    +  Q T+ +++  CA +  
Sbjct: 259 FN-WMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQ 317

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE-IDNEVSWNSMIV 309
                Q+H C+L  GF     V +AL D Y+KCG+L  A  +   +    N VSW ++I 
Sbjct: 318 LALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIIS 377

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           G  + G    A+ LF +M    +  ++FTY ++L    S +       +H+ ++KT ++ 
Sbjct: 378 GCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSIL----PPQIHAQVIKTNYQH 433

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
              V  AL+  Y+K G+ + A  +F +++ KDV++W+++++  A  G  E A   F+ M 
Sbjct: 434 IPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMA 493

Query: 430 ISGICPDHVVVSSILSACAELTV-LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
           I GI P+   +SS++ ACA  +  ++ G+Q HA+ +K     ++ V ++LV +Y++ G I
Sbjct: 494 IQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNI 553

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
           + A  VF+    RD+++W ++I G AQ+G   +A++ + QM A G + D +TF+ ++  C
Sbjct: 554 DSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGC 613

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           +H GL    + YF+SM + + I P  +HYACM+DL  R+GKL E  +L+  M     A V
Sbjct: 614 THNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMV 673

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           W+ LL ACRVH ++ELG+ +A+ L  LEP ++  YV LSN+Y+ AGKW++   VRKLM  
Sbjct: 674 WRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDY 733

Query: 669 RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHN 728
           R ++KE GCSW++  ++VH FI+ D+ HP+   IY K+  I+  +K+ GY P+ +F LH+
Sbjct: 734 RKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHD 793

Query: 729 VEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHII 788
           + E+ KE  L  HSE+LA+AFGL+  P G P++I KNLRVCGDCH  MK +S +  R II
Sbjct: 794 IAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIEDREII 853

Query: 789 LRDSNRFHHFKAGNCSCGDYW 809
           +RD +RFHHF  G CSCGD+W
Sbjct: 854 MRDCSRFHHFNGGACSCGDFW 874



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 157/538 (29%), Positives = 268/538 (49%), Gaps = 9/538 (1%)

Query: 86  AKKLFNETPFKNFFTWSS-LIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCS 144
           A+   +E P ++    ++ +++ Y+  G+  E  + F   +  G      TL  VL+ C 
Sbjct: 51  ARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACR 110

Query: 145 LKGLLQRGEQFHGYAIKTCFDLNAFVV-TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAW 203
                  GEQ H   +K   D       T LVDMY KC  + E   +F+  P  KN V W
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPK-KNVVTW 169

Query: 204 TTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS 263
           T+++TG +      + +  F  MR EG+  N FTF S+L+A A+  A D G +VH   + 
Sbjct: 170 TSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVK 229

Query: 264 SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSL 323
            G  ++V+V ++L++MYAKCG ++ A+ +  + E  + VSWN+++ G        EAL L
Sbjct: 230 FGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQL 289

Query: 324 FKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK 383
           F +  A   K+   TY +V+   A+   L  A+ +HS ++K GF     V  AL D Y+K
Sbjct: 290 FHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSK 349

Query: 384 QGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
            G L  A  +F++    ++V+SWT++I+GC  +G    A+  FS MR   + P+    S+
Sbjct: 350 CGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSA 409

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
           +L   A L++L    Q+HA  +K+      SV  +L+  Y+K G   DA  +F  +  +D
Sbjct: 410 MLK--ASLSILP--PQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKD 465

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
           V+ W+A++   AQ G  + A   +++M  +G KP+  T   ++ AC+      +    F 
Sbjct: 466 VVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFH 525

Query: 563 SMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
           ++   Y         + ++ +  R G +  A+ + ++   + D   W +++S    HG
Sbjct: 526 AISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQT-DRDLVSWNSMISGYAQHG 582



 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 211/392 (53%), Gaps = 5/392 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N+++  YA  G + +AK +FN    ++  +W++L+ G      ++EA +LF + +  
Sbjct: 237 FVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRAT 296

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
             + +Q T   V++LC+    L    Q H   +K  F L   V+T L D Y+KC  + +A
Sbjct: 297 MGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADA 356

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F M    +N V+WT +I+G  QNG    A+  F  MR + V  N+FT+ ++L A  +
Sbjct: 357 LNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLS 416

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           +       Q+H  ++ + ++    V +AL+  Y+K G  + A  + +  E  + V+W++M
Sbjct: 417 I----LPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAM 472

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTG 366
           +   A+ G  + A  LF KM  + IK ++FT  SV++ C   +  ++  +  H++ +K  
Sbjct: 473 LSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYR 532

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
           +     V++AL+ MY+++GN+D A +VF    D+D++SW S+I+G A HG   +A++ F 
Sbjct: 533 YHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFR 592

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
            M  SGI  D V   +++  C    ++  GQQ
Sbjct: 593 QMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQ 624



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 207/442 (46%), Gaps = 14/442 (3%)

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A Y     P     V    ++  Y++ G   + ++ F   R  GV  +  T   +L AC 
Sbjct: 51  ARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACR 110

Query: 247 AVSARDFGAQVHGCILSSGFE-ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           +V  R  G Q+H   +  G +   V   ++L+DMY KCG +     + E     N V+W 
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWT 170

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           S++ G A    H E ++LF +M A  I  + FT+ SVL+  AS   L+  + VH+  VK 
Sbjct: 171 SLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKF 230

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G     FV N+L++MYAK G ++ A  VFN M+ +D++SW +L+ G   +    EAL+ F
Sbjct: 231 GCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLF 290

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
            + R +         ++++  CA L  L   +Q+H+  LK G   + +V  +L   Y+KC
Sbjct: 291 HESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKC 350

Query: 486 GCINDANRVFD-SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           G + DA  +F  +  +R+V++WTA+I GC QNG    A+  + +M      P+  T+  +
Sbjct: 351 GELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAM 410

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACM-IDLLGRSGKLIEAKALLD--QMV 601
           L A         +            IK    H   +   LL    K    +  L   +M+
Sbjct: 411 LKA---------SLSILPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMI 461

Query: 602 GEPDATVWKALLSACRVHGDLE 623
            + D   W A+LS     GD E
Sbjct: 462 EQKDVVAWSAMLSCHAQAGDCE 483



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 35/172 (20%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           ++ ALV  +S  G ID A  +FE+ +DRD  +WN+MI+                      
Sbjct: 539 VSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMIS---------------------- 576

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                    GY+ +G  ++A E F QM+  G +    T   V+  C+  GL+  G+Q+  
Sbjct: 577 ---------GYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFD 627

Query: 158 YAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
             ++    +N  +     +VD+Y++   + E   L +  P     + W T++
Sbjct: 628 SMVRD-HKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLL 678


>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g01510
 gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
 gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
 gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 280/771 (36%), Positives = 441/771 (57%), Gaps = 8/771 (1%)

Query: 45  DFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSL 104
           D    G++  A +++++M  ++  + NTMI+ +  +G +  A+ LF+  P +   TW+ L
Sbjct: 57  DLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTIL 116

Query: 105 IYGYSNYGLDIEAFELFWQM--QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT 162
           +  Y+      EAF+LF QM        P   T   +L  C+         Q H +A+K 
Sbjct: 117 MGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKL 176

Query: 163 CFDLNAFVVTG--LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAI 220
            FD N F+     L+  Y + + +  A  LF+  P+ K+ V + T+ITGY ++G   ++I
Sbjct: 177 GFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE-KDSVTFNTLITGYEKDGLYTESI 235

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
             F  MR  G + + FTF  +L A   +     G Q+H   +++GF  +  V + ++D Y
Sbjct: 236 HLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFY 295

Query: 281 AKCGDLDSARRLL-EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           +K   +   R L  E  E+D  VS+N +I  +++   ++ +L  F++M        +F +
Sbjct: 296 SKHDRVLETRMLFDEMPELDF-VSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPF 354

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
            ++L+  A+   L   + +H   +    +    V N+L+DMYAK    + A ++F  +  
Sbjct: 355 ATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQ 414

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           +  +SWT+LI+G    G +   LK F+ MR S +  D    +++L A A    L  G+Q+
Sbjct: 415 RTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQL 474

Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKG 519
           HA  ++SG   ++   + LV +YAKCG I DA +VF+ M  R+ ++W ALI   A NG G
Sbjct: 475 HAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDG 534

Query: 520 KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC 579
           + A+  + +M+  G +PD ++ +G+L ACSH G  E    YF++M  +YGI P   HYAC
Sbjct: 535 EAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYAC 594

Query: 580 MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM- 638
           M+DLLGR+G+  EA+ L+D+M  EPD  +W ++L+ACR+H +  L ERAA  LF +E + 
Sbjct: 595 MLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLR 654

Query: 639 NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPL 698
           +A  YV +SN+Y+ AG+WE    V+K M+ RGI+K P  SWVE N ++H+F S D+ HP 
Sbjct: 655 DAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPN 714

Query: 699 RTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA 758
             +I  KI+E+   I+  GY PD +  + +V+E+ K   L YHSE+LAVAF L++ P+G 
Sbjct: 715 GDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGC 774

Query: 759 PIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           PI + KNLR C DCH A+K IS +  R I +RD++RFHHF  G CSCGDYW
Sbjct: 775 PIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825


>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  540 bits (1392), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 304/787 (38%), Positives = 435/787 (55%), Gaps = 51/787 (6%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKN--FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           +I+ Y + G L  A  L    P  +   + W+SLI  Y N G   +    F  M    + 
Sbjct: 65  LISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWT 124

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  YT   V + C     ++ G+  H  +  T F  N FV   LV MY++C  + +A  +
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKV 184

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE-GVESNQFTFPSILTACAAVS 249
           F   P   + V+W ++I  Y++ G    A+E F  M  E G   +  T  ++L  CA+V 
Sbjct: 185 FDEMPVW-DVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVG 243

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
            R  G Q HG  ++S    N++V + L+DMYAK G +D A  +     + + VSWN+M+ 
Sbjct: 244 TRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVA 303

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYP----------------------------- 340
           G+++ G  ++A+ LF++M    IK+D  T+                              
Sbjct: 304 GYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKP 363

Query: 341 ------SVLNCFASNIDLNNAKSVHSLIVK-------TGFEGYKFVNNALIDMYAKQGNL 387
                 SVL+  AS   L + K +H   +K        G      V N LIDMYAK   +
Sbjct: 364 NEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKV 423

Query: 388 DCAFMVFNLM--QDKDVISWTSLITGCAYHGSYEEALKYFSDM--RISGICPDHVVVSSI 443
           D A  +F+ +  +++DV++WT +I G + HG   +AL+  S+M        P+   +S  
Sbjct: 424 DIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCA 483

Query: 444 LSACAELTVLEFGQQVHAVFLKSG-GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
           L ACA L  L  G+Q+HA  L++      L V N L+ +YAKCG I DA  VFD+M  ++
Sbjct: 484 LVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKN 543

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
            +TWT+L+ G   +G G+EAL  +++M   G K D +T + +L+ACSH+G+ +    YF 
Sbjct: 544 EVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFN 603

Query: 563 SMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDL 622
            M   +G+ PGP+HYAC++DLLGR+G+L  A  L+++M  EP   VW ALLS CR+HG +
Sbjct: 604 RMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKV 663

Query: 623 ELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVET 682
           ELGE AA  + EL   N   Y  LSNMY+ AG+W+D  R+R LM+ +GI+K PGCSWVE 
Sbjct: 664 ELGEYAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEG 723

Query: 683 NSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHS 742
                 F   D+ HP   +IY  + + M  IK+ GYVP+  FALH+V++E K+  L  HS
Sbjct: 724 IKGTTTFFVGDKTHPHAKEIYQVLSDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHS 783

Query: 743 EKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGN 802
           EKLA+A+G+LT PQGA IRI KNLRVCGDCHTA  Y+S +    IILRDS+RFHHFK G 
Sbjct: 784 EKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHEIILRDSSRFHHFKNGL 843

Query: 803 CSCGDYW 809
           CSC  YW
Sbjct: 844 CSCKGYW 850



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 161/502 (32%), Positives = 246/502 (49%), Gaps = 53/502 (10%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N ++A Y+  G L +A+K+F+E P  +  +W+S+I  Y+  G    A E+F +M  E
Sbjct: 163 FVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNE 222

Query: 128 -GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
            G+RP   TL NVL  C+  G    G+QFHG+A+ +    N FV   LVDMYAK   + E
Sbjct: 223 FGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDE 282

Query: 187 AEYLFKMFPDGKNHVAWTTM-----------------------------------ITGYS 211
           A  +F   P  K+ V+W  M                                   I+GY+
Sbjct: 283 ANTVFSNMPV-KDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYA 341

Query: 212 QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC--------ILS 263
           Q G G++A+   R M   G++ N+ T  S+L+ CA+V A   G ++H C        +  
Sbjct: 342 QRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH-CYAIKYPMDLRK 400

Query: 264 SGFEANVYVQSALIDMYAKCGDLDSARRLLE--YSEIDNEVSWNSMIVGFARQGFHKEAL 321
           +G      V + LIDMYAKC  +D AR + +    +  + V+W  MI G+++ G   +AL
Sbjct: 401 NGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKAL 460

Query: 322 SLFKKMHARD--IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK-FVNNALI 378
            L  +M   D   + + FT    L   AS   L+  K +H+  ++        FV+N LI
Sbjct: 461 ELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLI 520

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
           DMYAK G++  A +VF+ M +K+ ++WTSL+TG   HG  EEAL  F +MR  G   D V
Sbjct: 521 DMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGV 580

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LVLVYAKCGCINDANRVFDS 497
            +  +L AC+   +++ G +         G S      + LV +  + G +N A R+ + 
Sbjct: 581 TLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEE 640

Query: 498 MHTR-DVITWTALIMGCAQNGK 518
           M      + W AL+  C  +GK
Sbjct: 641 MPMEPPPVVWVALLSCCRIHGK 662



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 141/401 (35%), Positives = 208/401 (51%), Gaps = 30/401 (7%)

Query: 43  LVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK----N 97
           LVD ++  G +DEA  +F  M  +D  +WN M+A Y+  GR  +A +LF +   +    +
Sbjct: 270 LVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMD 329

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
             TWS+ I GY+  GL  EA  +  QM   G +P++ TL +VL  C+  G L  G++ H 
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 389

Query: 158 YAIKTCFDLNA-------FVVTGLVDMYAKCKCIFEAEYLF-KMFPDGKNHVAWTTMITG 209
           YAIK   DL          V+  L+DMYAKCK +  A  +F  + P  ++ V WT MI G
Sbjct: 390 YAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGG 449

Query: 210 YSQNGYGFKAIECFRDMRVEGVES--NQFTFPSILTACAAVSARDFGAQVHGCILSSGFE 267
           YSQ+G   KA+E   +M  E  ++  N FT    L ACA+++A   G Q+H   L +   
Sbjct: 450 YSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQN 509

Query: 268 A-NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK 326
           A  ++V + LIDMYAKCGD+  AR + +     NEV+W S++ G+   G+ +EAL +F++
Sbjct: 510 AVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEE 569

Query: 327 MHARDIKIDDFTYPSVL-NCFASN-ID-----LNNAKSVHSLIVKTGFEGYKFVNNALID 379
           M     K+D  T   VL  C  S  ID      N  K+     V  G E Y      L+D
Sbjct: 570 MRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKT--DFGVSPGPEHYA----CLVD 623

Query: 380 MYAKQGNLDCAFMVFNLM-QDKDVISWTSLITGCAYHGSYE 419
           +  + G L+ A  +   M  +   + W +L++ C  HG  E
Sbjct: 624 LLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVE 664


>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 865

 Score =  540 bits (1392), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 295/834 (35%), Positives = 461/834 (55%), Gaps = 75/834 (8%)

Query: 40  NRALVDFSNSGEIDEAGQLF-EKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF 98
           N  L  + + G + +A +L    ++  +  T N M+  YA  GRL +A +LF   P ++ 
Sbjct: 43  NTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDV 102

Query: 99  FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR-PSQYTLDNVLRLCSLKGLLQRGEQFHG 157
            +W++L+ GY      + + E F  M   G   P+ +TL   ++ C   G      Q   
Sbjct: 103 ASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLA 162

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD-----------------GKNH 200
              K     ++ V   LVDM+ +C  +  A  LF    +                 G +H
Sbjct: 163 MVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDH 222

Query: 201 -------------VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
                        V+W  M++  SQ+G   +A++   DM+ +GV  +  T+ S LTACA 
Sbjct: 223 ALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACAR 282

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           +S+  +G Q+H  ++ +    + YV SAL+++YAK G    A+ +       N V+W  +
Sbjct: 283 LSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVL 342

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I GF + G   E++ LF +M A  + +D F   ++++   S +DL   + +HSL +K+G 
Sbjct: 343 ISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQ 402

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
                V+N+LI MYAK  NL  A  +F  M +KD++SWTS+IT  +  G+  +A ++F  
Sbjct: 403 IQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDG 462

Query: 428 MRISGIC--------------------------------PDHVVVSSILSACAELTVLEF 455
           M    +                                 PD V   ++   CA+L   + 
Sbjct: 463 MSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKL 522

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
           G Q+    +K G     SV N+++ +Y+KCG I +A +VFD ++ +D+++W A+I G +Q
Sbjct: 523 GDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQ 582

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
           +G GK+A++ +D +L RG KPDYI++V +L  CSH+GL +  ++YF+ M + + I PG +
Sbjct: 583 HGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLE 642

Query: 576 HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
           H++CM+DLLGR+G L EAK L+D M  +P A VW ALLSAC++HG+ EL E AA ++FEL
Sbjct: 643 HFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFEL 702

Query: 636 EPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG 695
           +  ++  Y+ ++ +Y+ AGK +D+A++RKLM+ +GI+K PG SW+E +++VH+F ++D  
Sbjct: 703 DSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVS 762

Query: 696 HPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLP 755
           HP    I  K+DE+M  I   GYV          +    EI   +HSEKLAVAFGL+TLP
Sbjct: 763 HPQVLAIRKKLDELMEKIARLGYV--------RTDSTRSEI---HHSEKLAVAFGLMTLP 811

Query: 756 QGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
              PI I KNLR+CGDCHT +K IS V  R  ++RD+ RFHHF  G+CSCGDYW
Sbjct: 812 TWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFNGGSCSCGDYW 865



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 151/638 (23%), Positives = 269/638 (42%), Gaps = 105/638 (16%)

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKM---F 194
           + LR C  +G L      HG  +        F+   L+  Y  C  + +A  L  M    
Sbjct: 9   DALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAH 68

Query: 195 PDGKNH----------------------------VAWTTMITGYSQNGYGFKAIECFRDM 226
           P+   H                             +W T+++GY Q+     ++E F  M
Sbjct: 69  PNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSM 128

Query: 227 RVEGVE-SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
              G    N FT    + +C A+       Q+   +     + +  V +AL+DM+ +CG 
Sbjct: 129 HRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGA 188

Query: 286 LDSARRL----------------------------LEYSEIDNE---VSWNSMIVGFARQ 314
           +D A RL                            LE  +   E   VSWN M+   ++ 
Sbjct: 189 VDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQS 248

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
           G  +EAL +   M ++ +++D  TY S L   A    L   K +H+ +++       +V 
Sbjct: 249 GRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVA 308

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           +AL+++YAK G    A  VFN + D++ ++WT LI+G   +G + E+++ F+ MR   + 
Sbjct: 309 SALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMT 368

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
            D   +++++S C     L  G+Q+H++ LKSG   ++ V NSL+ +YAKC  +  A  +
Sbjct: 369 LDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAI 428

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG--------------------- 533
           F  M+ +D+++WT++I   +Q G   +A +F+D M  +                      
Sbjct: 429 FRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGL 488

Query: 534 -----------TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMID 582
                       +PD++T+V L   C+  G  +          KV G+         +I 
Sbjct: 489 RMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKV-GLIIDTSVANAVIT 547

Query: 583 LLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           +  + G+++EA+ + D  +   D   W A+++    HG   +G++A     ++    A P
Sbjct: 548 MYSKCGRILEARKVFD-FLNVKDIVSWNAMITGYSQHG---MGKQAIEIFDDILKRGAKP 603

Query: 643 ----YVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPG 676
               YV + +  S +G  ++      +MK R     PG
Sbjct: 604 DYISYVAVLSGCSHSGLVQEGKFYFDMMK-RAHNISPG 640



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 128/508 (25%), Positives = 214/508 (42%), Gaps = 95/508 (18%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS- 296
           F   L +C A  A      +HG +++ G  + V++Q+ L+  Y  CG L  ARRLL    
Sbjct: 7   FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 66

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD------------------IKIDDF- 337
              N ++ N M+ G+A+ G   +A+ LF +M ARD                  + ++ F 
Sbjct: 67  AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFL 126

Query: 338 -------TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF-------VNNALIDMYAK 383
                  ++P+     A  +    A   HSL ++      KF       V  AL+DM+ +
Sbjct: 127 SMHRSGDSWPNAFT-LACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVR 185

Query: 384 QGNLDC-------------------------------AFMVFNLMQDKDVISWTSLITGC 412
            G +D                                A  +F+ M ++DV+SW  +++  
Sbjct: 186 CGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSAL 245

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
           +  G   EAL    DM+  G+  D    +S L+ACA L+ L +G+Q+HA  +++      
Sbjct: 246 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDP 305

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
            V ++LV +YAK GC  +A  VF+S+H R+ + WT LI G  Q G   E+++ ++QM A 
Sbjct: 306 YVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAE 365

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG-------IKPGPDHYAC----MI 581
               D      L+  C               MD   G       +K G          +I
Sbjct: 366 LMTLDQFALATLISGCC------------SRMDLCLGRQLHSLCLKSGQIQAVVVSNSLI 413

Query: 582 DLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFE-LEPMNA 640
            +  +   L  A+A+  + + E D   W ++++A    G++      A   F+ +   N 
Sbjct: 414 SMYAKCDNLQSAEAIF-RFMNEKDIVSWTSMITAYSQVGNVA----KAREFFDGMSEKNV 468

Query: 641 MPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           + +  +   Y   G  ED  R+ K+M S
Sbjct: 469 ITWNAMLGAYIQHGAEEDGLRMYKVMLS 496


>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  540 bits (1392), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 304/761 (39%), Positives = 441/761 (57%), Gaps = 50/761 (6%)

Query: 99  FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
           F W+ LI    + G   +  +L+ +MQ  G+RP  YT   VL+ C      + G   H  
Sbjct: 92  FWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAV 151

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF-KMFPDG-KNHVAWTTMITGYSQNGYG 216
              + F+ N FV  GLV MY +C     A  +F +M   G  + V+W +++  Y Q G  
Sbjct: 152 VFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDS 211

Query: 217 FKAIECFRDMRVE-GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSA 275
            +A++ F  M  + G+  +  +  ++L ACA+V A   G QVHG  L SG   +V+V +A
Sbjct: 212 IRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNA 271

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           ++DMYAKCG ++ A ++ E  ++ + VSWN+M+ G+++ G   +AL LF+K+    I+++
Sbjct: 272 VVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELN 331

Query: 336 DFTYPSVLNCFASN------IDL----------NNAKSVHSLIVKTGFEGYKF------- 372
             T+ +V+  +A        +D+           N  ++ SL+      G          
Sbjct: 332 VVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHC 391

Query: 373 -------------------VNNALIDMYAKQGNLDCAFMVFNLM--QDKDVISWTSLITG 411
                              V NALIDMY+K  +   A  +F+L+  +D+ V++WT LI G
Sbjct: 392 HAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGG 451

Query: 412 CAYHGSYEEALKYFSDMRISG--ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
            A HG   EAL+ FS M      + P+   +S  L ACA L  L FG+Q+HA  L++   
Sbjct: 452 NAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFE 511

Query: 470 SS-LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
           S+ L V N L+ +Y+K G ++ A  VFD+MH R+ ++WT+L+ G   +G+G+EALQ + +
Sbjct: 512 SAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYE 571

Query: 529 MLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSG 588
           M   G  PD +TFV +L+ACSH+G+ +    YF  M+K +G+ PG +HYACM+DLL R+G
Sbjct: 572 MQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAG 631

Query: 589 KLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSN 648
           +L EA  L+  M  +P   VW ALLSACRV+ ++ELGE AAN L ELE  N   Y  LSN
Sbjct: 632 RLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSN 691

Query: 649 MYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDE 708
           +Y+ A  W+D AR+R LMK+ GI+K PGCSWV+       F + D  HP+   IY  + +
Sbjct: 692 IYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRD 751

Query: 709 IMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRV 768
           +M  IK  GYVPD  FALH+V++E K   L+ HSEKLA+A+G+LT   GAPIRI KNLR 
Sbjct: 752 LMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRA 811

Query: 769 CGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           CGDCH+A  YIS +    II+RDS+RFHHFK G+CSC  YW
Sbjct: 812 CGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 852



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/410 (32%), Positives = 210/410 (51%), Gaps = 40/410 (9%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN----ET 93
           +  A+VD ++  G ++EA ++FE+M  +D  +WN M+  Y+  GR  +A  LF     E 
Sbjct: 268 VGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEK 327

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE 153
              N  TWS++I GY+  GL  EA ++F QM+L G  P+  TL ++L  C+L G L  G+
Sbjct: 328 IELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGK 387

Query: 154 QFHGYAIKTCFDLNA-------FVVTGLVDMYAKCKCIFEAEYLFKMF-PDGKNHVAWTT 205
           + H +AIK   +L+         V+  L+DMY+KCK    A  +F +  P  ++ V WT 
Sbjct: 388 ETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTV 447

Query: 206 MITGYSQNGYGFKAIECFRDMRVEG--VESNQFTFPSILTACAAVSARDFGAQVHGCILS 263
           +I G +Q+G   +A+E F  M      V  N FT    L ACA + A  FG Q+H  +L 
Sbjct: 448 LIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLR 507

Query: 264 SGFE-ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
           + FE A ++V + LIDMY+K GD+D+AR + +     N VSW S++ G+   G  +EAL 
Sbjct: 508 NRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQ 567

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN------- 375
           +F +M    +  D  T+  VL   +           HS +V  G   +  +N        
Sbjct: 568 IFYEMQKVGLVPDGVTFVVVLYACS-----------HSGMVDQGINYFNGMNKDFGVVPG 616

Query: 376 -----ALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYE 419
                 ++D+ ++ G LD A  +   M  K   + W +L++ C  + + E
Sbjct: 617 AEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVE 666



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 149/530 (28%), Positives = 244/530 (46%), Gaps = 71/530 (13%)

Query: 172 TGLVDMYAKCKCIFEA-EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG 230
           T ++ MY       +A   L ++ P       W  +I      G+    ++ +R M+  G
Sbjct: 62  THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLG 121

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
              + +TFP +L AC  + +   GA VH  + +SGFE NV+V + L+ MY +CG  ++AR
Sbjct: 122 WRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENAR 181

Query: 291 RLLEYSE---IDNEVSWNSMIVGFARQGFHKEALSLFKKM-HARDIKIDDFTYPSVLNCF 346
           ++ +      + + VSWNS++  + + G    A+ +F++M     I+ D  +  +VL   
Sbjct: 182 QVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPAC 241

Query: 347 ASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWT 406
           AS    +  K VH   +++G     FV NA++DMYAK G ++ A  VF  M+ KDV+SW 
Sbjct: 242 ASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWN 301

Query: 407 SLITGCAYHGSYE-----------------------------------EALKYFSDMRIS 431
           +++TG +  G ++                                   EAL  F  MR+ 
Sbjct: 302 AMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLC 361

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLK-------SGGCSSLSVDNSLVLVYAK 484
           G  P+ V + S+LS CA    L  G++ H   +K       +     L V N+L+ +Y+K
Sbjct: 362 GSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSK 421

Query: 485 CGCINDANRVFDSMHTRD--VITWTALIMGCAQNGKGKEALQFYDQMLARG--TKPDYIT 540
           C     A  +FD +  +D  V+TWT LI G AQ+G+  EAL+ + QML       P+  T
Sbjct: 422 CKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFT 481

Query: 541 FVGLLFACSHAGLAENARWY--------FESMDKVYGIKPGPDHYACMIDLLGRSGKLIE 592
               L AC+  G     R          FES               C+ID+  +SG +  
Sbjct: 482 ISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVA--------NCLIDMYSKSGDVDA 533

Query: 593 AKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           A+ + D M  + +   W +L++   +HG    GE A    +E++ +  +P
Sbjct: 534 ARVVFDNM-HQRNGVSWTSLMTGYGMHGR---GEEALQIFYEMQKVGLVP 579


>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
 gi|223942207|gb|ACN25187.1| unknown [Zea mays]
 gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 885

 Score =  540 bits (1392), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 295/834 (35%), Positives = 461/834 (55%), Gaps = 75/834 (8%)

Query: 40  NRALVDFSNSGEIDEAGQLF-EKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF 98
           N  L  + + G + +A +L    ++  +  T N M+  YA  GRL +A +LF   P ++ 
Sbjct: 63  NTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDV 122

Query: 99  FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR-PSQYTLDNVLRLCSLKGLLQRGEQFHG 157
            +W++L+ GY      + + E F  M   G   P+ +TL   ++ C   G      Q   
Sbjct: 123 ASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLA 182

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD-----------------GKNH 200
              K     ++ V   LVDM+ +C  +  A  LF    +                 G +H
Sbjct: 183 MVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDH 242

Query: 201 -------------VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
                        V+W  M++  SQ+G   +A++   DM+ +GV  +  T+ S LTACA 
Sbjct: 243 ALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACAR 302

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           +S+  +G Q+H  ++ +    + YV SAL+++YAK G    A+ +       N V+W  +
Sbjct: 303 LSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVL 362

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I GF + G   E++ LF +M A  + +D F   ++++   S +DL   + +HSL +K+G 
Sbjct: 363 ISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQ 422

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
                V+N+LI MYAK  NL  A  +F  M +KD++SWTS+IT  +  G+  +A ++F  
Sbjct: 423 IQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDG 482

Query: 428 MRISGIC--------------------------------PDHVVVSSILSACAELTVLEF 455
           M    +                                 PD V   ++   CA+L   + 
Sbjct: 483 MSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKL 542

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
           G Q+    +K G     SV N+++ +Y+KCG I +A +VFD ++ +D+++W A+I G +Q
Sbjct: 543 GDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQ 602

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
           +G GK+A++ +D +L RG KPDYI++V +L  CSH+GL +  ++YF+ M + + I PG +
Sbjct: 603 HGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLE 662

Query: 576 HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
           H++CM+DLLGR+G L EAK L+D M  +P A VW ALLSAC++HG+ EL E AA ++FEL
Sbjct: 663 HFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFEL 722

Query: 636 EPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG 695
           +  ++  Y+ ++ +Y+ AGK +D+A++RKLM+ +GI+K PG SW+E +++VH+F ++D  
Sbjct: 723 DSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVS 782

Query: 696 HPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLP 755
           HP    I  K+DE+M  I   GYV          +    EI   +HSEKLAVAFGL+TLP
Sbjct: 783 HPQVLAIRKKLDELMEKIARLGYV--------RTDSTRSEI---HHSEKLAVAFGLMTLP 831

Query: 756 QGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
              PI I KNLR+CGDCHT +K IS V  R  ++RD+ RFHHF  G+CSCGDYW
Sbjct: 832 TWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFNGGSCSCGDYW 885



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 151/638 (23%), Positives = 269/638 (42%), Gaps = 105/638 (16%)

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKM---F 194
           + LR C  +G L      HG  +        F+   L+  Y  C  + +A  L  M    
Sbjct: 29  DALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAH 88

Query: 195 PDGKNH----------------------------VAWTTMITGYSQNGYGFKAIECFRDM 226
           P+   H                             +W T+++GY Q+     ++E F  M
Sbjct: 89  PNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSM 148

Query: 227 RVEGVE-SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
              G    N FT    + +C A+       Q+   +     + +  V +AL+DM+ +CG 
Sbjct: 149 HRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGA 208

Query: 286 LDSARRL----------------------------LEYSEIDNE---VSWNSMIVGFARQ 314
           +D A RL                            LE  +   E   VSWN M+   ++ 
Sbjct: 209 VDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQS 268

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
           G  +EAL +   M ++ +++D  TY S L   A    L   K +H+ +++       +V 
Sbjct: 269 GRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVA 328

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           +AL+++YAK G    A  VFN + D++ ++WT LI+G   +G + E+++ F+ MR   + 
Sbjct: 329 SALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMT 388

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
            D   +++++S C     L  G+Q+H++ LKSG   ++ V NSL+ +YAKC  +  A  +
Sbjct: 389 LDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAI 448

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG--------------------- 533
           F  M+ +D+++WT++I   +Q G   +A +F+D M  +                      
Sbjct: 449 FRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGL 508

Query: 534 -----------TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMID 582
                       +PD++T+V L   C+  G  +          KV G+         +I 
Sbjct: 509 RMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKV-GLIIDTSVANAVIT 567

Query: 583 LLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           +  + G+++EA+ + D  +   D   W A+++    HG   +G++A     ++    A P
Sbjct: 568 MYSKCGRILEARKVFD-FLNVKDIVSWNAMITGYSQHG---MGKQAIEIFDDILKRGAKP 623

Query: 643 ----YVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPG 676
               YV + +  S +G  ++      +MK R     PG
Sbjct: 624 DYISYVAVLSGCSHSGLVQEGKFYFDMMK-RAHNISPG 660



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 128/508 (25%), Positives = 214/508 (42%), Gaps = 95/508 (18%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS- 296
           F   L +C A  A      +HG +++ G  + V++Q+ L+  Y  CG L  ARRLL    
Sbjct: 27  FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 86

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD------------------IKIDDF- 337
              N ++ N M+ G+A+ G   +A+ LF +M ARD                  + ++ F 
Sbjct: 87  AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFL 146

Query: 338 -------TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF-------VNNALIDMYAK 383
                  ++P+     A  +    A   HSL ++      KF       V  AL+DM+ +
Sbjct: 147 SMHRSGDSWPNAFT-LACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVR 205

Query: 384 QGNLDC-------------------------------AFMVFNLMQDKDVISWTSLITGC 412
            G +D                                A  +F+ M ++DV+SW  +++  
Sbjct: 206 CGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSAL 265

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
           +  G   EAL    DM+  G+  D    +S L+ACA L+ L +G+Q+HA  +++      
Sbjct: 266 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDP 325

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
            V ++LV +YAK GC  +A  VF+S+H R+ + WT LI G  Q G   E+++ ++QM A 
Sbjct: 326 YVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAE 385

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG-------IKPGPDHYAC----MI 581
               D      L+  C               MD   G       +K G          +I
Sbjct: 386 LMTLDQFALATLISGCC------------SRMDLCLGRQLHSLCLKSGQIQAVVVSNSLI 433

Query: 582 DLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFE-LEPMNA 640
            +  +   L  A+A+  + + E D   W ++++A    G++      A   F+ +   N 
Sbjct: 434 SMYAKCDNLQSAEAIF-RFMNEKDIVSWTSMITAYSQVGNVA----KAREFFDGMSEKNV 488

Query: 641 MPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           + +  +   Y   G  ED  R+ K+M S
Sbjct: 489 ITWNAMLGAYIQHGAEEDGLRMYKVMLS 516


>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score =  540 bits (1391), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 289/772 (37%), Positives = 446/772 (57%), Gaps = 14/772 (1%)

Query: 49  SGEIDEAGQLFEKMSDR----DGFTWNTMIAAYANSGRLREAKKLFNETPF--KNFFTWS 102
           SG ++    L  K+ D     D    N++I  Y+  G    A  +F       ++  +WS
Sbjct: 52  SGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHKRDLVSWS 111

Query: 103 SLIYGYSNYGLDIEAFELFWQMQLEGYR----PSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
           ++I  ++N  ++  A   F  M L+  R    P++Y    +LR CS       G     +
Sbjct: 112 AIISCFANNSMESRALLTFLHM-LQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAF 170

Query: 159 AIKTC-FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
            +KT  FD +  V   L+DM+ K     ++  +       KN V WT MIT YSQ G   
Sbjct: 171 LLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLD 230

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
            A++ F  + V     ++FT  S+L+AC  +     G Q+H  ++ SG  ++V+V   L+
Sbjct: 231 DAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLV 290

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
           DMYAK   ++++R++       N +SW ++I G+ +    +EA+ LF  M    +  + F
Sbjct: 291 DMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCF 350

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           T+ SVL   AS  D    K +H   +K G      V N+LI+MYA+ G ++CA   FN++
Sbjct: 351 TFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNIL 410

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
            +K++IS+ +     A     +E+  +  ++  +G+       + +LS  A +  +  G+
Sbjct: 411 FEKNLISYNTAADANAKALDSDESFNH--EVEHTGVGASPFTYACLLSGAACIGTIVKGE 468

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
           Q+HA+ +KSG  ++L ++N+L+ +Y+KCG    A +VF+ M  R+VITWT++I G A++G
Sbjct: 469 QIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHG 528

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY 577
              +AL+ + +ML  G KP+ +T++ +L ACSH GL + A  +F SM   + I P  +HY
Sbjct: 529 FATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHY 588

Query: 578 ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEP 637
           ACM+DLLGRSG L+EA   ++ M  + DA VW+  L +CRVH + +LGE AA  + E EP
Sbjct: 589 ACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKKILEREP 648

Query: 638 MNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHP 697
            +   Y+ LSN+Y++ G+W+D A +RK MK + + KE G SW+E ++QVH F   D  HP
Sbjct: 649 HDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHP 708

Query: 698 LRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQG 757
               IY ++DE+ L IK  GY+P+ +F LH+VE+E KE  L  HSEK+AVA+ L++ P+ 
Sbjct: 709 QARKIYDELDELALKIKNLGYIPNTDFVLHDVEDEQKEQYLFQHSEKIAVAYALISTPKP 768

Query: 758 APIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            PIR+FKNLRVCGDCHTA+KYIS V  R I++RD+NRFHH K G CSC DYW
Sbjct: 769 KPIRVFKNLRVCGDCHTAIKYISIVTGREIVVRDANRFHHIKDGKCSCNDYW 820



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 196/363 (53%), Gaps = 20/363 (5%)

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY--SEI 298
           +L AC      + G  +H  ++ SG   +  + ++LI +Y+KCGD ++A  +        
Sbjct: 45  LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHK 104

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMH--ARDIKI-DDFTYPSVLNCFASNIDLNNA 355
            + VSW+++I  FA       AL  F  M   +R+I   +++ + ++L   ++ +     
Sbjct: 105 RDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTG 164

Query: 356 KSVHSLIVKTG-FEGYKFVNNALIDMYAKQG-NLDCAFMVFNLMQDKDVISWTSLITGCA 413
            ++ + ++KTG F+ +  V  ALIDM+ K G ++  A MVF+ MQ K++++WT +IT  +
Sbjct: 165 LAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYS 224

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
             G  ++A+  F  + +S   PD   ++S+LSAC EL     G+Q+H+  ++SG  S + 
Sbjct: 225 QLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVF 284

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
           V  +LV +YAK   + ++ ++F++M   +V++WTALI G  Q+ + +EA++ +  ML   
Sbjct: 285 VGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGH 344

Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPGPDHYAC----MIDLLGRS 587
             P+  TF  +L AC  A L +     F    +++G  IK G     C    +I++  RS
Sbjct: 345 VTPNCFTFSSVLKAC--ASLPD-----FGIGKQLHGQTIKLGLSTINCVGNSLINMYARS 397

Query: 588 GKL 590
           G +
Sbjct: 398 GTM 400



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 16/207 (7%)

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
           +E   K  S + ++   P  +  S +L AC     LE G+ +H   + SG      + NS
Sbjct: 21  FESLRKAISRLDLTTTSP-LIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNS 79

Query: 478 LVLVYAKCGCINDANRVFDSM--HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           L+ +Y+KCG   +A  +F +M  H RD+++W+A+I   A N     AL  +  ML     
Sbjct: 80  LITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRN 139

Query: 536 ---PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP-DHYAC----MIDLLGRS 587
              P+   F  LL +CS+          F      + +K G  D + C    +ID+  + 
Sbjct: 140 IIYPNEYCFTALLRSCSNPLFFTTGLAIF-----AFLLKTGYFDSHVCVGCALIDMFTKG 194

Query: 588 GKLIEAKALLDQMVGEPDATVWKALLS 614
           G  I++  ++   +   +   W  +++
Sbjct: 195 GLDIQSARMVFDKMQHKNLVTWTLMIT 221


>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 285/675 (42%), Positives = 409/675 (60%), Gaps = 2/675 (0%)

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
           L +V++  +    L+RG+Q H   I   +    F+   LV+MY+KC  +  A  LF   P
Sbjct: 8   LAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMP 67

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGA 255
             +N V+WT MI+G SQN    +AI  F  MR+ G    QF F S + ACA++ + + G 
Sbjct: 68  Q-RNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGK 126

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           Q+H   L  G  + ++V S L DMY+KCG +  A ++ E     +EVSW +MI G+++ G
Sbjct: 127 QMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIG 186

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
             +EAL  FKKM   ++ ID     S L    +       +SVHS +VK GFE   FV N
Sbjct: 187 EFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGN 246

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQD-KDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           AL DMY+K G+++ A  VF +  + ++V+S+T LI G       E+ L  F ++R  GI 
Sbjct: 247 ALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIE 306

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           P+    SS++ ACA    LE G Q+HA  +K        V + LV +Y KCG +  A + 
Sbjct: 307 PNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQA 366

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
           FD +     I W +L+    Q+G GK+A++ +++M+ RG KP+ ITF+ LL  CSHAGL 
Sbjct: 367 FDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLV 426

Query: 555 ENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
           E    YF SMDK YG+ PG +HY+C+IDLLGR+G+L EAK  +++M  EP+A  W + L 
Sbjct: 427 EEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLG 486

Query: 615 ACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
           ACR+HGD E+G+ AA  L +LEP N+   V LSN+Y+   +WED   VR  M+   ++K 
Sbjct: 487 ACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKL 546

Query: 675 PGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGK 734
           PG SWV+   + H+F +ED  HP ++ IY K+D ++  IK AGYVP  +    ++++  K
Sbjct: 547 PGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMK 606

Query: 735 EIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNR 794
           E  L  HSE++AVAF L+++P G PI + KNLRVC DCH+A+K+IS V  R II+RD++R
Sbjct: 607 EKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSR 666

Query: 795 FHHFKAGNCSCGDYW 809
           FHHF  G+CSCGDYW
Sbjct: 667 FHHFTDGSCSCGDYW 681



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 130/390 (33%), Positives = 216/390 (55%), Gaps = 2/390 (0%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N ++  Y+  G L  A KLF+  P +N  +W+++I G S      EA   F  M++ 
Sbjct: 41  FLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRIC 100

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G  P+Q+   + +R C+  G ++ G+Q H  A+K       FV + L DMY+KC  +F+A
Sbjct: 101 GEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDA 160

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F+  P  K+ V+WT MI GYS+ G   +A+  F+ M  E V  +Q    S L AC A
Sbjct: 161 CKVFEEMP-CKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGA 219

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY-SEIDNEVSWNS 306
           + A  FG  VH  ++  GFE++++V +AL DMY+K GD++SA  +    SE  N VS+  
Sbjct: 220 LKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTC 279

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           +I G+      ++ LS+F ++  + I+ ++FT+ S++   A+   L     +H+ ++K  
Sbjct: 280 LIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKIN 339

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
           F+   FV++ L+DMY K G L+ A   F+ + D   I+W SL++    HG  ++A+K F 
Sbjct: 340 FDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFE 399

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFG 456
            M   G+ P+ +   S+L+ C+   ++E G
Sbjct: 400 RMVDRGVKPNAITFISLLTGCSHAGLVEEG 429



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 177/354 (50%), Gaps = 2/354 (0%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  + +   Y+  G + +A K+F E P K+  +W+++I GYS  G   EA   F +M  E
Sbjct: 142 FVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDE 201

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
                Q+ L + L  C      + G   H   +K  F+ + FV   L DMY+K   +  A
Sbjct: 202 EVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESA 261

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F +  + +N V++T +I GY +     K +  F ++R +G+E N+FTF S++ ACA 
Sbjct: 262 SNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACAN 321

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
            +A + G Q+H  ++   F+ + +V S L+DMY KCG L+ A +  +      E++WNS+
Sbjct: 322 QAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSL 381

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTG 366
           +  F + G  K+A+ +F++M  R +K +  T+ S+L  C  + +        +S+    G
Sbjct: 382 VSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYG 441

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYE 419
               +   + +ID+  + G L  A    N M  + +   W S +  C  HG  E
Sbjct: 442 VVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKE 495



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 116/262 (44%), Gaps = 36/262 (13%)

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           D   ++ ++   A+   L  G+Q+HA+ + +G      + N LV +Y+KCG ++ A ++F
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 496 DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAE 555
           D+M  R++++WTA+I G +QN K  EA++ +  M   G  P    F   + AC+  G  E
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123

Query: 556 NARWY------------------FESMD----------KVYGIKPGPDH--YACMIDLLG 585
             +                     E M           KV+   P  D   +  MID   
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183

Query: 586 RSGKLIEAKALLDQMVGEP---DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           + G+  EA     +M+ E    D  V  + L AC      + G    +++ +L    +  
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKL-GFESDI 242

Query: 643 YV--QLSNMYSTAGKWEDAARV 662
           +V   L++MYS AG  E A+ V
Sbjct: 243 FVGNALTDMYSKAGDMESASNV 264



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 77/171 (45%), Gaps = 15/171 (8%)

Query: 47  SNSGEIDEAGQLFEKMS----DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWS 102
           +N   +++  QL  ++     D D F  + ++  Y   G L +A + F+E        W+
Sbjct: 320 ANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWN 379

Query: 103 SLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT 162
           SL+  +  +GL  +A ++F +M   G +P+  T  ++L  CS  GL++ G  +  Y++  
Sbjct: 380 SLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYF-YSMDK 438

Query: 163 CFDLNAFVVTG------LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
            +     VV G      ++D+  +   + EA+      P   N   W + +
Sbjct: 439 TYG----VVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 485



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 93/227 (40%), Gaps = 25/227 (11%)

Query: 43  LVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK----N 97
           LVD +   G +++A Q F+++ D     WN++++ +   G  ++A K+F     +    N
Sbjct: 350 LVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPN 409

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
             T+ SL+ G S+ GL  E  + F+ M +  G  P +     V+ L    G L+  ++F 
Sbjct: 410 AITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFI 469

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKC-------IFEAEYLFKMFPDGKNHVAWTTMITG 209
               +  F+ NAF   G       C+           AE L K+ P  KN  A   +   
Sbjct: 470 N---RMPFEPNAF---GWCSFLGACRIHGDKEMGKLAAEKLVKLEP--KNSGALVLLSNI 521

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
           Y+      +  E  R +R+   + N    P             FGA+
Sbjct: 522 YANE----RQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAE 564


>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  539 bits (1389), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 283/689 (41%), Positives = 410/689 (59%), Gaps = 16/689 (2%)

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYA--K 180
           Q+QL    P   +L+    +  LK       Q H   ++TC  ++ F  + +V   A   
Sbjct: 37  QIQL---HPCLLSLEKCTTMSQLK-------QIHAQMLRTCLFVDPFSASKIVAFCALHD 86

Query: 181 CKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
              +  A  +F   P+        ++I GY+      +AI  ++ M ++G++ ++FTFPS
Sbjct: 87  SGSLPYARLVFNQIPNPTTFTC-NSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPS 145

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           +  +C  +     G Q+H      GF ++ Y+Q+ L++MY+ CG L SAR++ +     +
Sbjct: 146 LFKSCGVLCE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKS 202

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
            VSW +MI  +A+     EA+ LF++M    +K ++ T  +VL   A + DL  AK VH 
Sbjct: 203 VVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHK 262

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
            I +TG   +  + +AL+D+Y K G    A  +FN M +K++  W  +I G      YEE
Sbjct: 263 YIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEE 322

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
           AL  F++M++SG+  D V ++S+L AC  L  LE G+ +H    K      +++  +LV 
Sbjct: 323 ALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVD 382

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           +YAKCG I  A RVF  M  +DV+TWTALI+G A  G+G +AL+ + +M     KPD IT
Sbjct: 383 MYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAIT 442

Query: 541 FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
           FVG+L ACSHAGL      YF SM   YGI+P  +HY CM+D+LGR+G++ EA+ L+  M
Sbjct: 443 FVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNM 502

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAA 660
              PD  V   LLSACR+HG+L + ERAA  L EL+P N   YV LSN+YS+   WE A 
Sbjct: 503 PMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAK 562

Query: 661 RVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
           ++R+LM  R I+K PGCS +E    VH F+  D  HP  ++IY  +D++M  +K AGYVP
Sbjct: 563 KMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVP 622

Query: 721 DMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYIS 780
           D +  L +++E+ KE  L+ HSEKLA+AFGLL+   G PIR+ KNLRVC DCH+AMK+IS
Sbjct: 623 DKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFIS 682

Query: 781 AVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            VY R II+RD NRFHHF  G+CSC D+W
Sbjct: 683 EVYNREIIVRDRNRFHHFTKGSCSCRDFW 711



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 163/512 (31%), Positives = 246/512 (48%), Gaps = 48/512 (9%)

Query: 66  DGFTWNTMIA--AYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D F+ + ++A  A  +SG L  A+ +FN+ P    FT +S+I GY+N  L  +A   +  
Sbjct: 71  DPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQL 130

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M L+G  P ++T  ++ + C   G+L  G+Q H ++ K  F  +A++   L++MY+ C C
Sbjct: 131 MMLQGLDPDRFTFPSLFKSC---GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGC 187

Query: 184 IFEAEYLF-KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
           +  A  +F KM    K+ V+W TMI  Y+Q     +AI+ FR M +  V+ N+ T  ++L
Sbjct: 188 LVSARKVFDKMV--NKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVL 245

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           TACA     +   QVH  I  +G   +  + SAL+D+Y KCG    AR L       N  
Sbjct: 246 TACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLF 305

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
            WN MI G      ++EALSLF +M    +K D  T  S+L        L   K +H  I
Sbjct: 306 CWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYI 365

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
            K   E    +  AL+DMYAK G+++ A  VF  M +KDV++WT+LI G A  G   +AL
Sbjct: 366 EKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKAL 425

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
           + F +M++S + PD +    +L+AC+           HA                     
Sbjct: 426 ELFHEMQMSEVKPDAITFVGVLAACS-----------HA--------------------- 453

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQN--GKGKEALQFYDQMLARGTKPDYIT 540
              G +N+    F+SM  +  I  +    GC  +  G+     +  D +      PDY  
Sbjct: 454 ---GLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFV 510

Query: 541 FVGLLFACSHAG---LAENARWYFESMDKVYG 569
            VGLL AC   G   +AE A      +D   G
Sbjct: 511 LVGLLSACRIHGNLVVAERAAQQLIELDPKNG 542


>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  539 bits (1389), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 264/688 (38%), Positives = 405/688 (58%), Gaps = 30/688 (4%)

Query: 151 RGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
           + +Q H   ++T     + + T ++ +Y+    + ++  +F   P     +AW ++I  Y
Sbjct: 23  QAKQLHAQILRTSLPSPSLLST-ILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCY 81

Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV 270
           + +G    ++  F  M   G   +   FPS+L +C  +    FG  VHGCI+  G   ++
Sbjct: 82  TSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDL 141

Query: 271 YVQSALIDMYAKCGDLD-----------------------------SARRLLEYSEIDNE 301
           Y  +AL++MY+K   L+                             S R++ E     + 
Sbjct: 142 YTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDI 201

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           VSWN++I G A+ G H++AL + ++M   D++ D FT  SVL  FA  ++L   K +H  
Sbjct: 202 VSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGY 261

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
            ++ G++   F+ ++LIDMYAK   +D +  VF ++   D ISW S+I GC  +G ++E 
Sbjct: 262 AIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEG 321

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           LK+F  M I+ I P+HV  SSI+ ACA LT L  G+Q+H   ++S    ++ + ++LV +
Sbjct: 322 LKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDM 381

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           YAKCG I  A  +FD M   D+++WTA+IMG A +G   +A+  + +M   G KP+Y+ F
Sbjct: 382 YAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAF 441

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
           + +L ACSHAGL + A  YF SM + Y I PG +HYA + DLLGR G+L EA   +  M 
Sbjct: 442 MAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMH 501

Query: 602 GEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
            EP  +VW  LL+ACRVH ++EL E+ +  LF ++P N   YV LSN+YS AG+W+DA +
Sbjct: 502 IEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARK 561

Query: 662 VRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPD 721
           +R  M+ +G++K+P CSW+E  ++VH F++ D+ HP    I   +  ++  ++  GYV D
Sbjct: 562 LRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLD 621

Query: 722 MNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISA 781
               LH+VEEE K   L  HSE+LA+ FG+++ P G  IR+ KNLRVC DCHTA K+IS 
Sbjct: 622 TTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKFISK 681

Query: 782 VYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +  R I++RD++RFHHFK G CSCGD+W
Sbjct: 682 IVGREIVVRDNSRFHHFKDGKCSCGDFW 709



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/408 (29%), Positives = 209/408 (51%), Gaps = 29/408 (7%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFK-NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGY 129
           +T+++ Y+N   L ++  +FN  P       W S+I  Y+++GL + +   F QM   G 
Sbjct: 43  STILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGK 102

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
            P      +VL+ C+L   L+ GE  HG  I+     + +    L++MY+K   + E   
Sbjct: 103 YPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNT 162

Query: 190 LFKMFPDGKNH----------------------------VAWTTMITGYSQNGYGFKAIE 221
             K+F +GK                              V+W T+I+G +QNG    A+ 
Sbjct: 163 YKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALM 222

Query: 222 CFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYA 281
             R+M    +  + FT  S+L   A       G ++HG  + +G++A+V++ S+LIDMYA
Sbjct: 223 MVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYA 282

Query: 282 KCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPS 341
           KC  +D + R+       + +SWNS+I G  + G   E L  F++M    IK +  ++ S
Sbjct: 283 KCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSS 342

Query: 342 VLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
           ++   A    L+  K +H  I+++ F+G  F+ +AL+DMYAK GN+  A  +F+ M+  D
Sbjct: 343 IMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYD 402

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE 449
           ++SWT++I G A HG   +A+  F  M + G+ P++V   ++L+AC+ 
Sbjct: 403 MVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSH 450



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 207/379 (54%), Gaps = 16/379 (4%)

Query: 51  EIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSN 110
           E++   ++F++    D ++     + Y  S R     K+F   P ++  +W+++I G + 
Sbjct: 159 EVNTYKKVFDEGKTSDVYSKKEKESYYLGSLR-----KVFEMMPKRDIVSWNTVISGNAQ 213

Query: 111 YGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV 170
            G+  +A  +  +M     RP  +TL +VL + +    L +G++ HGYAI+  +D + F+
Sbjct: 214 NGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFI 273

Query: 171 VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG 230
            + L+DMYAKC  + ++  +F M P   + ++W ++I G  QNG   + ++ F+ M +  
Sbjct: 274 GSSLIDMYAKCTRVDDSCRVFYMLPQ-HDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAK 332

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           ++ N  +F SI+ ACA ++    G Q+HG I+ S F+ NV++ SAL+DMYAKCG++ +AR
Sbjct: 333 IKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTAR 392

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASN 349
            + +  E+ + VSW +MI+G+A  G   +A+SLFK+M    +K +   + +VL  C  + 
Sbjct: 393 WIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAG 452

Query: 350 IDLNNAKSVHSLI----VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS- 404
           +     K  +S+     +  G E Y     A+ D+  + G L+ A+   + M  +   S 
Sbjct: 453 LVDEAWKYFNSMTQDYRIIPGLEHYA----AVADLLGRVGRLEEAYEFISDMHIEPTGSV 508

Query: 405 WTSLITGCAYHGSYEEALK 423
           W++L+  C  H + E A K
Sbjct: 509 WSTLLAACRVHKNIELAEK 527



 Score = 40.0 bits (92), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 6/94 (6%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK---- 96
           ALVD ++  G I  A  +F+KM   D  +W  MI  YA  G   +A  LF     +    
Sbjct: 377 ALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKP 436

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N+  + +++   S+ GL  EA++ F  M  + YR
Sbjct: 437 NYVAFMAVLTACSHAGLVDEAWKYFNSMT-QDYR 469


>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
 gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
          Length = 855

 Score =  539 bits (1388), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 310/799 (38%), Positives = 441/799 (55%), Gaps = 56/799 (7%)

Query: 67  GFT--WNTMIAAYANSGRLREAKKLFNE--TPFKNFFTWSSLIYGYSNYGLDIEAFELFW 122
           GFT  ++  + AY   G   EA  L           F W++LI      GL  +    + 
Sbjct: 57  GFTEMFSYAVGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYC 116

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           QMQ  G+ P  YT   VL+ C     L+ G   H          N F+   +V MY +C 
Sbjct: 117 QMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCG 176

Query: 183 CIFEAEYLFKMFPDGK--NHVAWTTMITGYSQNGYGFKAIE-CFR--DMRVEGVESNQFT 237
            + +A  +F    + K  + V+W +++  Y Q G    A+   FR  +     +  +  T
Sbjct: 177 ALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAIT 236

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
             +IL ACA+V A   G QVHG  + +G   +V+V +AL+ MYAKC  ++ A ++ E  +
Sbjct: 237 LVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIK 296

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN------ID 351
             + VSWN+M+ G+++ G    ALSLFK M   DIK+D  T+ +V+  +A        +D
Sbjct: 297 KKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALD 356

Query: 352 -----------------------------LNNAKSVHSLIVKTGF-------EGYKFVNN 375
                                        L   K  H+ ++K          E    V N
Sbjct: 357 VFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLN 416

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQ--DKDVISWTSLITGCAYHGSYEEALKYFSDM--RIS 431
            LIDMYAK  +   A  +F+ ++  DK+V++WT +I G A HG   +ALK F+ +  + +
Sbjct: 417 GLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKT 476

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCIND 490
            + P+   +S  L ACA L  L  G+Q+HA  L++   S  L V N L+ +Y+K G I+ 
Sbjct: 477 SLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDA 536

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           A  VFD+M  R+V++WT+L+ G   +G+G+EAL  +DQM   G   D ITF+ +L+ACSH
Sbjct: 537 ARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSH 596

Query: 551 AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
           +G+ +    YF  M K +GI PG +HYACM+DLLGR+G+L EA  L+  M  EP A VW 
Sbjct: 597 SGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWV 656

Query: 611 ALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRG 670
           ALLSA R+H ++ELGE AA+ L EL   N   Y  LSN+Y+ A +W+D AR+R LMK  G
Sbjct: 657 ALLSASRIHANIELGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTG 716

Query: 671 IRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVE 730
           IRK PGCSW++       F   DR HP    IY+ + +++  IK+ GYVP  +FALH+V+
Sbjct: 717 IRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLLDLIKRIKDMGYVPQTSFALHDVD 776

Query: 731 EEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILR 790
           +E K   L  HSEKLAVA+G+LT   G PIRI KNLR+CGDCH+A+ YIS +    I+LR
Sbjct: 777 DEEKGDLLFEHSEKLAVAYGILTTAPGQPIRIHKNLRICGDCHSALTYISMIIDHEIVLR 836

Query: 791 DSNRFHHFKAGNCSCGDYW 809
           DS+RFHHFK G+CSC  YW
Sbjct: 837 DSSRFHHFKKGSCSCRSYW 855



 Score =  202 bits (513), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 131/403 (32%), Positives = 204/403 (50%), Gaps = 26/403 (6%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF---NETP 94
           +  ALV  ++   +++EA ++FE +  +D  +WN M+  Y+  G    A  LF    E  
Sbjct: 271 VGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEED 330

Query: 95  FK-NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE 153
            K +  TWS++I GY+  G   EA ++F QMQL G  P+  TL ++L  C+  G L  G+
Sbjct: 331 IKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGK 390

Query: 154 QFHGYAIKTCFDLN-------AFVVTGLVDMYAKCKCIFEAEYLFKMFP-DGKNHVAWTT 205
           Q H Y IK   +LN         V+ GL+DMYAKCK    A  +F       KN V WT 
Sbjct: 391 QTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTV 450

Query: 206 MITGYSQNGYGFKAIECFRDM--RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS 263
           MI GY+Q+G    A++ F  +  +   ++ N FT    L ACA +     G Q+H   L 
Sbjct: 451 MIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALR 510

Query: 264 SGFEANV-YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
           +  E+ V YV + LIDMY+K GD+D+AR + +  ++ N VSW S++ G+   G  +EAL 
Sbjct: 511 NENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALH 570

Query: 323 LFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLI----VKTGFEGYKFVNNAL 377
           LF +M      +D  T+  VL  C  S +        H ++    +  G E Y      +
Sbjct: 571 LFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYA----CM 626

Query: 378 IDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYE 419
           +D+  + G L+ A  ++ N+  +   + W +L++    H + E
Sbjct: 627 VDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIE 669


>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Vitis vinifera]
          Length = 802

 Score =  538 bits (1387), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 281/749 (37%), Positives = 423/749 (56%), Gaps = 8/749 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N ++  Y   G    AKKLF+  P +N  +W+SLI GY+  G   E   LF + ++ 
Sbjct: 55  FLLNNLLYMYCKCGETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMS 114

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
             R  ++T  N L +C     L+ G   H     +       +   L+DMY KC  I  A
Sbjct: 115 DLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWA 174

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F+   D  + V+W ++I GY + G   + +     M   G+  N +   S L AC +
Sbjct: 175 RLVFES-ADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGS 233

Query: 248 --VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
              S+ + G  +HGC +  G + +V V +AL+D YAK GDL+ A ++ +     N V +N
Sbjct: 234 NFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYN 293

Query: 306 SMIVGFAR-----QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
           +MI GF +       F  EA+ LF +M +R +K  +FT+ S+L   ++       K +H+
Sbjct: 294 AMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHA 353

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
            I K   +  +F+ NAL+++Y+  G+++     F+     DV+SWTSLI G   +G +E 
Sbjct: 354 QIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEG 413

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
            L  F ++  SG  PD   +S +LSACA L  ++ G+Q+HA  +K+G  +   + NS + 
Sbjct: 414 GLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQIC 473

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           +YAKCG I+ AN  F      D+++W+ +I   AQ+G  KEA+  ++ M   G  P++IT
Sbjct: 474 MYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHIT 533

Query: 541 FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
           F+G+L ACSH GL E    YFE M K +GI P   H AC++DLLGR+G+L EA++ +   
Sbjct: 534 FLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDS 593

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAA 660
             E D  +W++LLSACRVH   + G+R A  + ELEP  A  YV L N+Y+ AG    A 
Sbjct: 594 GFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPAT 653

Query: 661 RVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
            +R LMK RG++KEPG SW+E  + VH F++ DR HP    IY +++E++  IK+  Y+ 
Sbjct: 654 EIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYID 713

Query: 721 DMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYIS 780
           +   +  +  +      ++YHSEKLAV FG+++LP+ AP+R+ KNLR C  CH  MK  S
Sbjct: 714 EKLVSDASEPKHKDNSMVSYHSEKLAVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFS 773

Query: 781 AVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            +  R IILRD  RFH F+ G+CSCGDYW
Sbjct: 774 RLENREIILRDPIRFHRFRDGSCSCGDYW 802



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 175/569 (30%), Positives = 276/569 (48%), Gaps = 36/569 (6%)

Query: 124 MQLEGYRPSQY----TLDNV----LRLCSLK-GLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
           MQ   + P  Y     LD+V    L  CS + G L  G+  H + IKTCF    F++  L
Sbjct: 1   MQTPPHNPQPYYLGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNL 60

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           + MY KC     A+ LF   P  +N V+W ++I+GY+Q G+  + +  F++ R+  +  +
Sbjct: 61  LYMYCKCGETDVAKKLFDRMPK-RNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLD 119

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
           +FTF + L+ C        G  +H  I  SG    V + ++LIDMY KCG +D AR + E
Sbjct: 120 KFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFE 179

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI--DL 352
            ++  + VSWNS+I G+ R G + E L L  KM    + ++ +   S L    SN    +
Sbjct: 180 SADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSI 239

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
              K +H   VK G +    V  AL+D YAK G+L+ A  +F LM D +V+ + ++I G 
Sbjct: 240 ECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGF 299

Query: 413 AYHGSY-----EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG 467
               +       EA+  F +M+  G+ P     SSIL AC+ +   E G+Q+HA   K  
Sbjct: 300 LQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYN 359

Query: 468 GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYD 527
             S   + N+LV +Y+  G I D  + F S    DV++WT+LI+G  QNG+ +  L  + 
Sbjct: 360 LQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFH 419

Query: 528 QMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACM----IDL 583
           ++L  G KPD  T   +L AC++    ++           Y IK G  ++  +    I +
Sbjct: 420 ELLFSGRKPDEFTISIMLSACANLAAVKSGEQI-----HAYAIKTGIGNFTIIQNSQICM 474

Query: 584 LGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELE-----PM 638
             + G +  A     +    PD   W  ++S+   HG      + A +LFEL        
Sbjct: 475 YAKCGDIDSANMTFKE-TKNPDIVSWSVMISSNAQHG----CAKEAVDLFELMKGSGIAP 529

Query: 639 NAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
           N + ++ +    S  G  E+  R  ++MK
Sbjct: 530 NHITFLGVLVACSHGGLVEEGLRYFEIMK 558



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/486 (28%), Positives = 242/486 (49%), Gaps = 44/486 (9%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           L  +L+D +   G ID A  +FE   + D  +WN++IA                      
Sbjct: 157 LTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIA---------------------- 194

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLC--SLKGLLQRGEQF 155
                    GY   G + E   L  +M   G   + Y L + L+ C  +    ++ G+  
Sbjct: 195 ---------GYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKML 245

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ--- 212
           HG A+K   DL+  V T L+D YAK   + +A  +FK+ PD  N V +  MI G+ Q   
Sbjct: 246 HGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPD-PNVVMYNAMIAGFLQMET 304

Query: 213 --NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV 270
             + +  +A+  F +M+  G++ ++FTF SIL AC+ + A + G Q+H  I     +++ 
Sbjct: 305 MADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDE 364

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
           ++ +AL+++Y+  G ++   +    +   + VSW S+IVG  + G  +  L+LF ++   
Sbjct: 365 FIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFS 424

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
             K D+FT   +L+  A+   + + + +H+  +KTG   +  + N+ I MYAK G++D A
Sbjct: 425 GRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSA 484

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
            M F   ++ D++SW+ +I+  A HG  +EA+  F  M+ SGI P+H+    +L AC+  
Sbjct: 485 NMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHG 544

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV--YAKCGCINDANR-VFDSMHTRDVITWT 507
            ++E G +   +  K  G +  +V +S  +V    + G + +A   + DS    D + W 
Sbjct: 545 GLVEEGLRYFEIMKKDHGITP-NVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWR 603

Query: 508 ALIMGC 513
           +L+  C
Sbjct: 604 SLLSAC 609


>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
 gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
          Length = 825

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 284/747 (38%), Positives = 427/747 (57%), Gaps = 7/747 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N ++  YA  G L  A++LF+  P +N  ++ +L+ GY+  G   EA  LF ++Q
Sbjct: 83  DTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQ 142

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            EG+  + + L  +L++             H  A K   D NAFV + L+D Y+ C  + 
Sbjct: 143 REGHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVS 202

Query: 186 EAEYLFKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            A  +F    DG   K+ V WT M++ YS+N     A+  F  MR+ G + N F   S+L
Sbjct: 203 HARCVF----DGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVL 258

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
            A   +S+   G  +HGC + +  +   +V  AL+DMYAKCG ++ AR + E    D+ +
Sbjct: 259 KAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVI 318

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
            W+ +I  +A+   +++A  +F +M    +  ++F+   VL   A+   L+  + +H+L+
Sbjct: 319 LWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLV 378

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           +K G+E   FV NAL+D+YAK  N++ +  +F  ++D + +SW ++I G    G  E+AL
Sbjct: 379 IKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDAL 438

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
             F +MR + +    V  SS+L ACA    ++   Q+H++  KS   +   V NSL+  Y
Sbjct: 439 SVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTY 498

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
           AKCGCI DA +VF+S+   DV++W A+I G A +G+  +AL+ +++M    TKP+ +TFV
Sbjct: 499 AKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFV 558

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
            LL  C   GL       F SM   + IKP  DHY C++ LLGR+G+L +A   +  +  
Sbjct: 559 ALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPS 618

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
            P   VW+ALLS+C VH ++ LG+ +A  + E+EP +   YV LSNMY+ AG  +  A +
Sbjct: 619 TPSPMVWRALLSSCVVHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALL 678

Query: 663 RKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDM 722
           RK M++ G++KE G SWVE   +VH F      HP    I + ++ + L     GYVPD+
Sbjct: 679 RKSMRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDI 738

Query: 723 NFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAV 782
           N  LH+V+EE K   L  HSE+LA+A+GL   P G PIRI KNLR C DCHT  K IS +
Sbjct: 739 NVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDCHTVFKVISKI 798

Query: 783 YLRHIILRDSNRFHHFKAGNCSCGDYW 809
             R I++RD NRFHHF  G CSCGDYW
Sbjct: 799 VQREIVVRDINRFHHFDEGICSCGDYW 825



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 157/512 (30%), Positives = 275/512 (53%), Gaps = 9/512 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           DR+ F  +++I AY+  G +  A+ +F+   +K+  TW++++  YS   +  +A   F +
Sbjct: 182 DRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSK 241

Query: 124 MQLEGYRPSQYTLDNVLR--LCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
           M++ G +P+ + L +VL+  +C    +L +G   HG A+KT  D    V   L+DMYAKC
Sbjct: 242 MRMAGAKPNPFVLTSVLKAAVCLSSAVLGKG--IHGCAVKTLCDTEPHVGGALLDMYAKC 299

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
             I +A  +F++ P   + + W+ +I+ Y+Q+    +A E F  M    V  N+F+   +
Sbjct: 300 GYIEDARTVFEIIPH-DDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGV 358

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           L ACA V+  D G Q+H  ++  G+E+ ++V +AL+D+YAKC +++++  +       NE
Sbjct: 359 LQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANE 418

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           VSWN++IVG+ + GF ++ALS+F++M A  +     T+ SVL   A+   + +   +HSL
Sbjct: 419 VSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSL 478

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           I K+ F     V N+LID YAK G +  A  VF  +   DV+SW ++I+G A HG   +A
Sbjct: 479 IEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDA 538

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV-HAVFLKSGGCSSLSVDNSLVL 480
           L+ F+ M  S   P+ V   ++LS C    ++  G  + +++ +      S+     +V 
Sbjct: 539 LELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVR 598

Query: 481 VYAKCGCINDANR-VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
           +  + G +NDA + + D   T   + W AL+  C  + K     +F  + +      D  
Sbjct: 599 LLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVH-KNVALGKFSAEKVLEIEPQDET 657

Query: 540 TFVGLLFACSHAGLAENARWYFESMDKVYGIK 571
           T+V L    + AG+ +      +SM  + G+K
Sbjct: 658 TYVLLSNMYAAAGILDQVALLRKSMRNI-GVK 688



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 198/396 (50%), Gaps = 13/396 (3%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G   + + D +      ++  YA  G + +A+ +F   P  +   WS LI  Y+    + 
Sbjct: 275 GCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNE 334

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           +AFE+F +M      P++++L  VL+ C+    L  G+Q H   IK  ++   FV   L+
Sbjct: 335 QAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALM 394

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           D+YAKC+ +  +  +F+   D  N V+W T+I GY Q+G+   A+  F++MR   V S Q
Sbjct: 395 DVYAKCRNMENSLEIFRSLRDA-NEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQ 453

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            TF S+L ACA  ++     Q+H  I  S F  +  V ++LID YAKCG +  A ++ E 
Sbjct: 454 VTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFES 513

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               + VSWN++I G+A  G   +AL LF +M+  D K +D T+ ++L+   S   +N  
Sbjct: 514 IIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQG 573

Query: 356 KSVHSLI-----VKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLI 409
            S+ + +     +K   + Y      ++ +  + G L+ A   + ++      + W +L+
Sbjct: 574 LSLFNSMTMDHRIKPSMDHY----TCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALL 629

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
           + C  H +   AL  FS  ++  I P       +LS
Sbjct: 630 SSCVVHKNV--ALGKFSAEKVLEIEPQDETTYVLLS 663



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 169/321 (52%), Gaps = 2/321 (0%)

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEA--NVYVQSALIDMYAKCGDLDSARR 291
           + +    +L  C A      G  VH  ++  G  A  + +  + L+++YAK G L +ARR
Sbjct: 46  DSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARR 105

Query: 292 LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID 351
           L +     N VS+ +++ G+A +G  +EA  LF+++     +++ F   ++L    +   
Sbjct: 106 LFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDA 165

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
                 +H+   K G +   FV ++LID Y+  G +  A  VF+ +  KD ++WT++++ 
Sbjct: 166 PGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSC 225

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
            + +   E+AL  FS MR++G  P+  V++S+L A   L+    G+ +H   +K+   + 
Sbjct: 226 YSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTE 285

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
             V  +L+ +YAKCG I DA  VF+ +   DVI W+ LI   AQ+ + ++A + + +M+ 
Sbjct: 286 PHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMR 345

Query: 532 RGTKPDYITFVGLLFACSHAG 552
               P+  +  G+L AC++  
Sbjct: 346 SSVVPNEFSLSGVLQACANVA 366



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 100/233 (42%), Gaps = 23/233 (9%)

Query: 421 ALKYFSDMRISGICP--DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV--DN 476
           AL++  D   S   P  D    + +L  C        G+ VHA  ++ GG + L     N
Sbjct: 29  ALQWLDDELASLALPKLDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCAN 88

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
            L+ +YAK G +  A R+FD M  R+++++  L+ G A  G  +EA   + ++   G + 
Sbjct: 89  VLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEV 148

Query: 537 DY---ITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA----CMIDLLGRSGK 589
           ++    T + +L A    GL                 K G D  A     +ID     G 
Sbjct: 149 NHFVLTTILKVLVAMDAPGLT--------CCIHACACKLGHDRNAFVGSSLIDAYSLCGA 200

Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           +  A+ + D ++ + DA  W A++S    + + ++ E A N   ++    A P
Sbjct: 201 VSHARCVFDGIIWK-DAVTWTAMVSC---YSENDIPEDALNTFSKMRMAGAKP 249



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 6/122 (4%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNET----PFK 96
           +L+D ++  G I +A ++FE +   D  +WN +I+ YA  GR  +A +LFN         
Sbjct: 493 SLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKP 552

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVLRLCSLKGLLQRGEQF 155
           N  T+ +L+    + GL  +   LF  M ++   +PS      ++RL    G L    +F
Sbjct: 553 NDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKF 612

Query: 156 HG 157
            G
Sbjct: 613 IG 614


>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
 gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
          Length = 785

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 282/751 (37%), Positives = 433/751 (57%), Gaps = 18/751 (2%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  NT++AAY   G    A++L +E P +N  +++ LI  YS  GL   + E   + +  
Sbjct: 44  FLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRA 103

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G    +++    L  CS  G L+ G   H  AI        FV   LV MY+KC  + EA
Sbjct: 104 GVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEA 163

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F +  + ++ V+W ++++GY + G   + +  F  MR  G+  N F   S++  C+ 
Sbjct: 164 RRVFDV-AEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSG 222

Query: 248 VS--ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
                 D    VHGC++ +G +++V++ SA+IDMYAK G L  A  L    +  N V +N
Sbjct: 223 RGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFN 282

Query: 306 SMIVGFAR------QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           +MI GF R      +    EAL+L+ ++ +R ++  +FT+ SVL        L   K +H
Sbjct: 283 TMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIH 342

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
             ++K  F+   F+ +ALID+Y   G ++  F  F      D+++WT++++GC  +  +E
Sbjct: 343 GQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHE 402

Query: 420 EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
           +AL  F +   +G+ PD   +SS+++ACA L V   G+Q+     KSG      + NS V
Sbjct: 403 KALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCV 462

Query: 480 LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
            +YA+ G ++ A R F  M + DV++W+A+I   AQ+G  ++AL F+D+M+     P+ I
Sbjct: 463 HMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEI 522

Query: 540 TFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ 599
           TF+G+L ACSH GL +    Y+E+M K YG+ P   H  C++DLLGR+G+L +A+A +  
Sbjct: 523 TFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISN 582

Query: 600 MVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDA 659
            +   D  +W++LL++CR+H DLE G+  AN + ELEP ++  YV L NMY  AG+   A
Sbjct: 583 SIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLA 642

Query: 660 ARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYV 719
           ++ R LMK RG++KEPG SW+E    VH F++ D+ HP  + IY+K++E++  I++    
Sbjct: 643 SKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIEK---- 698

Query: 720 PDMNFALHNVEEEGKEIGLAY-HSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKY 778
                A  + E   +E  L   HSEKLAVA G++ LPQ APIR+ KNLRVC DCH+ MK 
Sbjct: 699 ----LATTDTEISKREQNLMNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCHSTMKL 754

Query: 779 ISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           IS    R IILRD  RFHHF+ G+CSC DYW
Sbjct: 755 ISKSENREIILRDPIRFHHFRDGSCSCADYW 785



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 175/365 (47%), Gaps = 9/365 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI------EA 117
           D D F  + MI  YA  G L EA  LF      N   ++++I G+      I      EA
Sbjct: 244 DSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEA 303

Query: 118 FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
             L+ ++Q  G +P+++T  +VLR C+L G L+ G+Q HG  IK  F  + F+ + L+D+
Sbjct: 304 LTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDL 363

Query: 178 YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
           Y    C+ +    F+  P   + V WT M++G  QN    KA+  F +    G++ + FT
Sbjct: 364 YFNSGCMEDGFRCFRSSPK-HDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFT 422

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
             S++ ACA+++    G Q+      SGF+    + ++ + MYA+ GD+D+A R  +  E
Sbjct: 423 ISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEME 482

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAK 356
             + VSW+++I   A+ G  ++AL  F +M    +  ++ T+  VL  C    +     +
Sbjct: 483 SHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLR 542

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNL-DCAFMVFNLMQDKDVISWTSLITGCAYH 415
              ++    G          ++D+  + G L D    + N +   D + W SL+  C  H
Sbjct: 543 YYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLASCRIH 602

Query: 416 GSYEE 420
              E 
Sbjct: 603 RDLER 607



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 182/357 (50%), Gaps = 10/357 (2%)

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM 327
           A++++++ L+  Y + G    ARRLL+     N VS+N +I  ++R+G    +L    + 
Sbjct: 41  ASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARA 100

Query: 328 HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL 387
               + +D F+Y + L   +    L   ++VH+L +  G     FV+N+L+ MY+K G +
Sbjct: 101 RRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEM 160

Query: 388 DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSAC 447
             A  VF++ +++D +SW SL++G    G+ EE ++ F+ MR  G+  +   + S++  C
Sbjct: 161 GEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCC 220

Query: 448 AEL--TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
           +      ++  + VH   +K+G  S + + ++++ +YAK G + +A  +F S+   +V+ 
Sbjct: 221 SGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVM 280

Query: 506 WTALIMGCAQN----GK--GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW 559
           +  +I G  +     GK    EAL  Y ++ +RG +P   TF  +L AC+ AG  E  + 
Sbjct: 281 FNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQ 340

Query: 560 YFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSAC 616
               + K Y  +      + +IDL   SG  +E      +   + D   W A++S C
Sbjct: 341 IHGQVIK-YTFQEDDFIGSALIDLYFNSG-CMEDGFRCFRSSPKHDIVTWTAMVSGC 395



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 119/255 (46%), Gaps = 3/255 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           GQ+ +     D F  + +I  Y NSG + +  + F  +P  +  TW++++ G     L  
Sbjct: 343 GQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHE 402

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           +A  LF +    G +P  +T+ +V+  C+   + + GEQ   +A K+ FD    +    V
Sbjct: 403 KALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCV 462

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
            MYA+   +  A   F+   +  + V+W+ +I+ ++Q+G    A+  F +M    V  N+
Sbjct: 463 HMYARSGDVDAATRRFQEM-ESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNE 521

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLE 294
            TF  +LTAC+     D G + +  +    G    +   + ++D+  + G L  A   + 
Sbjct: 522 ITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFIS 581

Query: 295 YSEID-NEVSWNSMI 308
            S    + V W S++
Sbjct: 582 NSIFHADPVIWRSLL 596



 Score = 43.1 bits (100), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 5/115 (4%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE----TPFKNFFTW 101
           ++ SG++D A + F++M   D  +W+ +I+ +A  G  R+A   F+E        N  T+
Sbjct: 465 YARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITF 524

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
             ++   S+ GL  E    +  M  + G  P+      V+ L    G L   E F
Sbjct: 525 LGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAF 579


>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 874

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 272/741 (36%), Positives = 437/741 (58%), Gaps = 7/741 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
             ++  Y   G + + + +F   P +N  TW+SL+ GY       +   LF++M+ EG  
Sbjct: 139 TALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVW 198

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+ +T  +VL   + +G +  G + H  ++K       FV   L++MY+KC  + EA+ +
Sbjct: 199 PNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAV 258

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F+   + ++ V+W T++ G   N +  +A++ F D R    + +Q T+ +++  CA +  
Sbjct: 259 FRQM-ETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQ 317

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL-LEYSEIDNEVSWNSMIV 309
                Q+H C+L  GF ++  V +A++D Y+KCG+LD A  + L      N VSW +MI 
Sbjct: 318 LALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIG 377

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           G  +      A +LF +M   ++K ++FTY +VL      +       +H+ I+KT ++ 
Sbjct: 378 GCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPIL----LPQIHAQIIKTNYQH 433

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
              V  AL+  Y+K GN + A  +F ++  KDV++W+++++  +  G  + A   F  M 
Sbjct: 434 APSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMS 493

Query: 430 ISGICPDHVVVSSILSACAELTV-LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
           + G+ P+   +SS + ACA  T  ++ G+Q HA+ +K     ++ V ++LV +YA+ G I
Sbjct: 494 MQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSI 553

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
           + A  VF+    RD+++W ++I G AQ+G  KEAL  + QM   G + D  TF+ ++  C
Sbjct: 554 DSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGC 613

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           +HAGL +  + YF+SM   + I P  +HY+CM+DL  R+GKL E   L++ M     A V
Sbjct: 614 THAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMV 673

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           W+ LL ACRVH ++ELG+ AA  L  LEP ++  YV LSN+Y+ AG+W++   VRKLM S
Sbjct: 674 WRTLLGACRVHKNVELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDS 733

Query: 669 RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHN 728
           + ++KE GCSW++  ++VH FI+ D+ HPL   IY+K+  +   +K+ GY P+ +  LH+
Sbjct: 734 KKVKKEAGCSWIQIKNKVHSFIACDKSHPLSEQIYAKLKAMTTRLKQEGYCPNTSVVLHD 793

Query: 729 VEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHII 788
           + EE KE  L  HSE+LA+AFGL+  P   P++I KNLRVCGDCH  MK +S +  R II
Sbjct: 794 IAEEQKETMLVMHSERLALAFGLIATPPRTPLQIVKNLRVCGDCHMVMKMVSLIEDREII 853

Query: 789 LRDSNRFHHFKAGNCSCGDYW 809
           +RD +RFHHF AG CSCGD+W
Sbjct: 854 MRDCSRFHHFNAGACSCGDFW 874



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 165/565 (29%), Positives = 274/565 (48%), Gaps = 26/565 (4%)

Query: 74  IAAYANSGRLRE----------AKKLFNETPFKNFFTWSS------LIYGYSNYGLDIEA 117
           ++A A++ RL +          A++  +  P ++    SS      + YG    G   EA
Sbjct: 26  LSALASAARLEDDCADTCNAPGARQALDGMPSRDAAAGSSSNPVAIVDYGRRGKGRG-EA 84

Query: 118 FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD-LNAFVVTGLVD 176
            + F  +   G R     +  VL++C L      GEQ H   +K  FD     V T LVD
Sbjct: 85  LDHFVDVHRCG-RVQGAAVSRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVD 143

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           MY KC  + +   +F+  P  +N V WT+++TGY Q       +  F  MR EGV  N F
Sbjct: 144 MYMKCGGVEDGRVVFEGMPK-RNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPF 202

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           TF S+L+A A+  A D G +VH   +  G  + V+V ++LI+MY+KCG ++ A+ +    
Sbjct: 203 TFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQM 262

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
           E  + VSWN+++ G        EAL LF    A   K+   TY +V+   A+   L  A+
Sbjct: 263 ETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALAR 322

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYH 415
            +HS ++K GF     V  A++D Y+K G LD AF +F LM   ++V+SWT++I GC  +
Sbjct: 323 QLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQN 382

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
                A   FS MR   + P+    S++L+A   + +     Q+HA  +K+    + SV 
Sbjct: 383 ADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPILL----PQIHAQIIKTNYQHAPSVG 438

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
            +L+  Y+K G   +A  +F  +  +DV+ W+A++   +Q G    A   + +M  +G K
Sbjct: 439 TALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMK 498

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           P+  T    + AC+      +    F ++   Y  +      + ++ +  R G +  A+ 
Sbjct: 499 PNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARI 558

Query: 596 LLDQMVGEPDATVWKALLSACRVHG 620
           + ++   + D   W +++S    HG
Sbjct: 559 VFERQT-DRDLVSWNSMISGYAQHG 582



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 121/449 (26%), Positives = 233/449 (51%), Gaps = 7/449 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N++I  Y+  G + EAK +F +   ++  +W++L+ G       +EA +LF   +  
Sbjct: 237 FVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRAS 296

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
             + SQ T   V++LC+    L    Q H   +K  F  +  V+T ++D Y+KC  + +A
Sbjct: 297 MAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDA 356

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F + P  +N V+WT MI G  QN     A   F  MR + V+ N+FT+ ++LTA   
Sbjct: 357 FNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIP 416

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           +       Q+H  I+ + ++    V +AL+  Y+K G+ + A  + +  +  + V+W++M
Sbjct: 417 I----LLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAM 472

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTG 366
           +  +++ G    A ++F KM  + +K ++FT  S ++ C +    ++  +  H++ +K  
Sbjct: 473 LSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYR 532

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
           ++    V +AL+ MYA++G++D A +VF    D+D++SW S+I+G A HG  +EAL  F 
Sbjct: 533 YQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFR 592

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQ-VHAVFLKSGGCSSLSVDNSLVLVYAKC 485
            M   GI  D     +++  C    +++ GQQ   ++ +      ++   + +V +Y++ 
Sbjct: 593 QMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRA 652

Query: 486 GCINDANRVFDSMH-TRDVITWTALIMGC 513
           G +++   + + M      + W  L+  C
Sbjct: 653 GKLDETMNLIEGMPFPAGAMVWRTLLGAC 681



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 131/442 (29%), Positives = 218/442 (49%), Gaps = 22/442 (4%)

Query: 207 ITGYSQNGYGF-KAIECFRDM----RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI 261
           I  Y + G G  +A++ F D+    RV+G   ++     +L  C  +  R  G Q+H   
Sbjct: 71  IVDYGRRGKGRGEALDHFVDVHRCGRVQGAAVSR-----VLKVCGLIPDRVSGEQLHCLC 125

Query: 262 LSSGFE-ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEA 320
           +  GF+ A V V +AL+DMY KCG ++  R + E     N V+W S++ G+ +     + 
Sbjct: 126 VKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDV 185

Query: 321 LSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDM 380
           ++LF +M A  +  + FT+ SVL+  AS   ++  + VH+  VK G     FV N+LI+M
Sbjct: 186 MALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINM 245

Query: 381 YAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVV 440
           Y+K G ++ A  VF  M+ +D++SW +L+ G   +    EAL+ F D R S         
Sbjct: 246 YSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTY 305

Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH- 499
           S+++  CA L  L   +Q+H+  LK G  S  +V  +++  Y+KCG ++DA  +F  M  
Sbjct: 306 STVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPG 365

Query: 500 TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW 559
           +++V++WTA+I GC QN     A   + +M     KP+  T+  +L A     L +    
Sbjct: 366 SQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPILLPQIHAQ 425

Query: 560 YFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVH 619
             ++       +  P     ++    + G   EA ++  +M+   D   W A+LS     
Sbjct: 426 IIKT-----NYQHAPSVGTALLASYSKLGNTEEALSIF-KMIDHKDVVAWSAMLSCYSQA 479

Query: 620 GDLELGERAANNLFELEPMNAM 641
           GD +     A N+F    M  M
Sbjct: 480 GDCD----GATNVFIKMSMQGM 497



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 32/163 (19%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++  G ID A  +FE+ +DRD  +WN+MI+ YA                           
Sbjct: 547 YARKGSIDSARIVFERQTDRDLVSWNSMISGYAQ-------------------------- 580

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ-FHGYAIKTCF 164
           +GYS      EA + F QM+  G      T   V+  C+  GL++ G+Q F    +    
Sbjct: 581 HGYSK-----EALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNI 635

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
                  + +VD+Y++   + E   L +  P     + W T++
Sbjct: 636 SPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLL 678


>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
          Length = 785

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 282/751 (37%), Positives = 434/751 (57%), Gaps = 18/751 (2%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  NT++AAY   G    A++L +E P +N  +++ LI  YS  GL   + E   + +  
Sbjct: 44  FLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRA 103

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G    +++    L  CS  G L+ G   H  AI        FV   LV MY+KC  + EA
Sbjct: 104 GVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEA 163

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F +  + ++ V+W ++++GY + G   + +  F  MR  G+  N F   S++  C+ 
Sbjct: 164 RRVFDV-AEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSG 222

Query: 248 VS--ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
                 D    VHGC++ +G +++V++ SA+IDMYAK G L  A  L    +  N V +N
Sbjct: 223 RGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFN 282

Query: 306 SMIVGFAR------QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           +MI GF R      +    EAL+L+ ++ +R ++  +FT+ SVL        L   K +H
Sbjct: 283 TMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIH 342

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
             ++K  F+   F+ +ALID+Y   G ++  F  F      D+++WT++++GC  +  +E
Sbjct: 343 GQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHE 402

Query: 420 EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
           +AL  F +   +G+ PD   +SS+++ACA L V   G+Q+     KSG      + NS V
Sbjct: 403 KALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCV 462

Query: 480 LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
            +YA+ G ++ A R F  M + DV++W+A+I   AQ+G  ++AL F+D+M+     P+ I
Sbjct: 463 HMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEI 522

Query: 540 TFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ 599
           TF+G+L ACSH GL +    Y+E+M+K YG+ P   H  C++DLLGR+G+L +A+A +  
Sbjct: 523 TFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISN 582

Query: 600 MVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDA 659
            +   D  +W++LL++CR+H DLE G+  AN + ELEP ++  YV L NMY  AG+   A
Sbjct: 583 GIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLA 642

Query: 660 ARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYV 719
           ++ R LMK RG++KEPG SW+E    VH F++ D+ HP  + IY+K++E++  I++    
Sbjct: 643 SKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIEK---- 698

Query: 720 PDMNFALHNVEEEGKEIGLAY-HSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKY 778
                A  + E   +E  L   HSEKLAVA G++ LPQ APIR+ KNLRVC DCH+ MK 
Sbjct: 699 ----LATTDTEISKREQNLMNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCHSTMKL 754

Query: 779 ISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           IS    R IILRD  RFHHF+ G+CSC DYW
Sbjct: 755 ISKSENREIILRDPIRFHHFRDGSCSCADYW 785



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 178/376 (47%), Gaps = 31/376 (8%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI------EA 117
           D D F  + MI  YA  G L EA  LF      N   ++++I G+      I      EA
Sbjct: 244 DSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEA 303

Query: 118 FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
             L+ ++Q  G +P+++T  +VLR C+L G L+ G+Q HG  IK  F  + F+ + L+D+
Sbjct: 304 LTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDL 363

Query: 178 YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
           Y    C+ +    F+  P   + V WT M++G  QN    KA+  F +    G++ + FT
Sbjct: 364 YFNSGCMEDGFRCFRSSPK-HDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFT 422

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
             S++ ACA+++    G Q+      SGF+    + ++ + MYA+ GD+D+A R  +  E
Sbjct: 423 ISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEME 482

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
             + VSW+++I   A+ G  ++AL  F +M    +  ++ T+  VL   +          
Sbjct: 483 SHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACS---------- 532

Query: 358 VHSLIVKTGFEGYKFVN------------NALIDMYAKQGNL-DCAFMVFNLMQDKDVIS 404
            H  +V  G   Y+ +N              ++D+  + G L D    + N +   D + 
Sbjct: 533 -HGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPVI 591

Query: 405 WTSLITGCAYHGSYEE 420
           W SL+  C  H   E 
Sbjct: 592 WRSLLASCRIHRDLER 607



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 182/357 (50%), Gaps = 10/357 (2%)

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM 327
           A++++++ L+  Y + G    ARRLL+     N VS+N +I  ++R+G    +L    + 
Sbjct: 41  ASLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARA 100

Query: 328 HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL 387
               + +D F+Y + L   +    L   ++VH+L +  G     FV+N+L+ MY+K G +
Sbjct: 101 RRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEM 160

Query: 388 DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSAC 447
             A  VF++ +++D +SW SL++G    G+ EE ++ F+ MR  G+  +   + S++  C
Sbjct: 161 GEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCC 220

Query: 448 AEL--TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
           +      ++  + VH   +K+G  S + + ++++ +YAK G + +A  +F S+   +V+ 
Sbjct: 221 SGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVM 280

Query: 506 WTALIMGCAQN----GK--GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW 559
           +  +I G  +     GK    EAL  Y ++ +RG +P   TF  +L AC+ AG  E  + 
Sbjct: 281 FNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQ 340

Query: 560 YFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSAC 616
               + K Y  +      + +IDL   SG  +E      +   + D   W A++S C
Sbjct: 341 IHGQVIK-YTFQEDDFIGSALIDLYFNSG-CMEDGFRCFRSSPKHDIVTWTAMVSGC 395



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 118/255 (46%), Gaps = 3/255 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           GQ+ +     D F  + +I  Y NSG + +  + F  +P  +  TW++++ G     L  
Sbjct: 343 GQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHE 402

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           +A  LF +    G +P  +T+ +V+  C+   + + GEQ   +A K+ FD    +    V
Sbjct: 403 KALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCV 462

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
            MYA+   +  A   F+   +  + V+W+ +I+ ++Q+G    A+  F +M    V  N+
Sbjct: 463 HMYARSGDVDAATRRFQEM-ESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNE 521

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLE 294
            TF  +LTAC+     D G + +  +    G    +   + ++D+  + G L  A   + 
Sbjct: 522 ITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFIS 581

Query: 295 YSEID-NEVSWNSMI 308
                 + V W S++
Sbjct: 582 NGIFHADPVIWRSLL 596



 Score = 43.1 bits (100), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 5/115 (4%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE----TPFKNFFTW 101
           ++ SG++D A + F++M   D  +W+ +I+ +A  G  R+A   F+E        N  T+
Sbjct: 465 YARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITF 524

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
             ++   S+ GL  E    +  M  + G  P+      V+ L    G L   E F
Sbjct: 525 LGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAF 579


>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
          Length = 1151

 Score =  537 bits (1383), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 289/754 (38%), Positives = 424/754 (56%), Gaps = 8/754 (1%)

Query: 20  IGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGF-----TWNTMI 74
           +G  R  H  G  V P   +  +++      E+   G+L      + GF       N +I
Sbjct: 128 LGLYRQMHRAG--VVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVI 185

Query: 75  AAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQY 134
             Y   G  R A+++F + P ++  T+++LI G++  G    A E+F +MQ  G  P   
Sbjct: 186 TLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCV 245

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
           T+ ++L  C+  G LQ+G Q H Y  K     +  +   L+D+Y KC  +  A  +F   
Sbjct: 246 TISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNS- 304

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
            D  N V W  M+  + Q     K+ E F  M+  G+  NQFT+P IL  C      D G
Sbjct: 305 SDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLG 364

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
            Q+H   + +GFE+++YV   LIDMY+K G L+ ARR+LE  +  + VSW SMI G+ + 
Sbjct: 365 EQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQH 424

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
              K+AL+ FK+M    I  D+    S ++  A    +     +H+ I  +G+ G   + 
Sbjct: 425 ECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIW 484

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           NAL+++YA+ G +  AF  F  M+ KD I+   L++G A  G +EEALK F  M  SG+ 
Sbjct: 485 NALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVK 544

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
            +     S LSA A L  ++ G+Q+HA  +K+G      V N+L+ +Y KCG   DA   
Sbjct: 545 HNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKME 604

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
           F  M  R+ ++W  +I  C+Q+G+G EAL  +DQM   G KP+ +TF+G+L ACSH GL 
Sbjct: 605 FSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLV 664

Query: 555 ENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
           E    YF+SM   YGI+P PDHYAC+ID+ GR+G+L  AK  +++M    DA VW+ LLS
Sbjct: 665 EEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLS 724

Query: 615 ACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
           AC+VH ++E+GE AA +L ELEP ++  YV LSN Y+   KW +  +VRK+M+ RG+RKE
Sbjct: 725 ACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKE 784

Query: 675 PGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGK 734
           PG SW+E  + VH F   DR HPL   IY+ +  I   + + GY  +     H+ E+EG+
Sbjct: 785 PGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGR 844

Query: 735 EIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRV 768
           +     HSEKLAV FGL++LP   P+R+ KNLRV
Sbjct: 845 DPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV 878



 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 178/550 (32%), Positives = 298/550 (54%), Gaps = 3/550 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +I  Y+ +G +  A+++F E   ++  +W +++ GY+  GL  EA  L+ QM   G  
Sbjct: 81  NLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVV 140

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+ Y L +VL  C+   L  +G   H    K  F    FV   ++ +Y +C     AE +
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P  ++ V + T+I+G++Q G+G  A+E F +M+  G+  +  T  S+L ACA++  
Sbjct: 201 FCDMPH-RDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGD 259

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              G Q+H  +  +G  ++  ++ +L+D+Y KCGD+++A  +   S+  N V WN M+V 
Sbjct: 260 LQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVA 319

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           F +     ++  LF +M A  I+ + FTYP +L       +++  + +HSL VKTGFE  
Sbjct: 320 FGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESD 379

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
            +V+  LIDMY+K G L+ A  V  ++++KDV+SWTS+I G   H   ++AL  F +M+ 
Sbjct: 380 MYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQK 439

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
            GI PD++ ++S +S CA +  +  G Q+HA    SG    +S+ N+LV +YA+CG I +
Sbjct: 440 CGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIRE 499

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           A   F+ M  +D IT   L+ G AQ+G  +EAL+ + +M   G K +  TFV  L A ++
Sbjct: 500 AFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASAN 559

Query: 551 AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
               +  +     + K  G     +    +I L G+ G   +AK    +M  E +   W 
Sbjct: 560 LAEIKQGKQIHARVIKT-GHSFETEVGNALISLYGKCGSFEDAKMEFSEM-SERNEVSWN 617

Query: 611 ALLSACRVHG 620
            ++++C  HG
Sbjct: 618 TIITSCSQHG 627



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 126/467 (26%), Positives = 226/467 (48%), Gaps = 13/467 (2%)

Query: 140 LRLCSLKGLL-QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           LR C   G   Q   + H  A+         V   L+D+Y+K   +  A  +F+     +
Sbjct: 48  LRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL-SAR 106

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           ++V+W  M++GY+QNG G +A+  +R M   GV    +   S+L++C        G  +H
Sbjct: 107 DNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIH 166

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
                 GF + ++V +A+I +Y +CG    A R+       + V++N++I G A+ G  +
Sbjct: 167 AQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGE 226

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
            AL +F++M    +  D  T  S+L   AS  DL     +HS + K G      +  +L+
Sbjct: 227 HALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLL 286

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
           D+Y K G+++ A ++FN     +V+ W  ++          ++ + F  M+ +GI P+  
Sbjct: 287 DLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQF 346

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
               IL  C     ++ G+Q+H++ +K+G  S + V   L+ +Y+K G +  A RV + +
Sbjct: 347 TYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEML 406

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS-----HAGL 553
             +DV++WT++I G  Q+   K+AL  + +M   G  PD I     +  C+       GL
Sbjct: 407 KEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGL 466

Query: 554 AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
             +AR Y      V G       +  +++L  R G++ EA +  ++M
Sbjct: 467 QIHARIY------VSGYSGDVSIWNALVNLYARCGRIREAFSSFEEM 507


>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 285/675 (42%), Positives = 409/675 (60%), Gaps = 2/675 (0%)

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
           L +V++  +    L+RG+Q H   I   +    F+   LV+MY+KC  +  A  LF   P
Sbjct: 8   LAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMP 67

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGA 255
             +N V+WT MI+G SQN    +AI  F  MR+ G    QF F S + ACA++ + + G 
Sbjct: 68  Q-RNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGK 126

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           Q+H   L  G  + ++V S L DMY+KCG +  A ++ E     +EVSW +MI G+++ G
Sbjct: 127 QMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIG 186

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
             +EAL  FKKM   ++ ID     S L    +       +SVHS +VK GFE   FV N
Sbjct: 187 EFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGN 246

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQD-KDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           AL DMY+K G+++ A  VF +  + ++V+S+T LI G       E+ L  F ++R  GI 
Sbjct: 247 ALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIE 306

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           P+    SS++ ACA    LE G Q+HA  +K        V + LV +Y KCG +  A + 
Sbjct: 307 PNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQA 366

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
           FD +     I W +L+    Q+G GK+A++F+++M+ RG KP+ ITF+ LL  CSHAGL 
Sbjct: 367 FDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLV 426

Query: 555 ENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
           E    YF SMDK YG+ PG +HY+C+IDLLGR+G+L EAK  +++M  EP+A  W + L 
Sbjct: 427 EEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLG 486

Query: 615 ACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
           ACR+HGD E+G+ AA  L +LEP N+   V LSN+Y+   +WED   VR  M+   ++K 
Sbjct: 487 ACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKL 546

Query: 675 PGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGK 734
           PG SWV+   + H+F +ED  H  ++ IY K+D ++  IK AGYVP  +    ++++  K
Sbjct: 547 PGYSWVDVGYKTHVFGAEDWSHXRKSAIYEKLDXLLDQIKAAGYVPXTDSVPLDMDDXMK 606

Query: 735 EIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNR 794
           E  L  HSE++AVAF L+++P G PI + KNLRVC DCH+A+K+IS V  R II+RD++R
Sbjct: 607 EKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSR 666

Query: 795 FHHFKAGNCSCGDYW 809
           FHHF  G+CSCGDYW
Sbjct: 667 FHHFTDGSCSCGDYW 681



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 130/390 (33%), Positives = 217/390 (55%), Gaps = 2/390 (0%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N ++  Y+  G L  A KLF+  P +N  +W+++I G S      EA   F  M++ 
Sbjct: 41  FLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRIC 100

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G  P+Q+   + +R C+  G ++ G+Q H  A+K       FV + L DMY+KC  +F+A
Sbjct: 101 GEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDA 160

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F+  P  K+ V+WT MI GYS+ G   +A+  F+ M  E V  +Q    S L AC A
Sbjct: 161 CKVFEEMP-CKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGA 219

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY-SEIDNEVSWNS 306
           + A  FG  VH  ++  GFE++++V +AL DMY+K GD++SA  +    SE  N VS+  
Sbjct: 220 LKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTC 279

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           +I G+      ++ LS+F ++  + I+ ++FT+ S++   A+   L     +H+ ++K  
Sbjct: 280 LIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKIN 339

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
           F+   FV++ L+DMY K G L+ A   F+ + D   I+W SL++    HG  ++A+K+F 
Sbjct: 340 FDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFE 399

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFG 456
            M   G+ P+ +   S+L+ C+   ++E G
Sbjct: 400 RMVDRGVKPNAITFISLLTGCSHAGLVEEG 429



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 176/354 (49%), Gaps = 2/354 (0%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  + +   Y+  G + +A K+F E P K+  +W+++I GYS  G   EA   F +M  E
Sbjct: 142 FVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDE 201

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
                Q+ L + L  C      + G   H   +K  F+ + FV   L DMY+K   +  A
Sbjct: 202 EVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESA 261

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F +  + +N V++T +I GY +     K +  F ++R +G+E N+FTF S++ ACA 
Sbjct: 262 SNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACAN 321

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
            +A + G Q+H  ++   F+ + +V S L+DMY KCG L+ A +  +      E++WNS+
Sbjct: 322 QAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSL 381

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTG 366
           +  F + G  K+A+  F++M  R +K +  T+ S+L  C  + +        +S+    G
Sbjct: 382 VSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYG 441

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYE 419
               +   + +ID+  + G L  A    N M  + +   W S +  C  HG  E
Sbjct: 442 VVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKE 495



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 116/262 (44%), Gaps = 36/262 (13%)

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           D   ++ ++   A+   L  G+Q+HA+ + +G      + N LV +Y+KCG ++ A ++F
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 496 DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAE 555
           D+M  R++++WTA+I G +QN K  EA++ +  M   G  P    F   + AC+  G  E
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123

Query: 556 NARWY------------------FESMD----------KVYGIKPGPDH--YACMIDLLG 585
             +                     E M           KV+   P  D   +  MID   
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183

Query: 586 RSGKLIEAKALLDQMVGEP---DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           + G+  EA     +M+ E    D  V  + L AC      + G    +++ +L    +  
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKL-GFESDI 242

Query: 643 YV--QLSNMYSTAGKWEDAARV 662
           +V   L++MYS AG  E A+ V
Sbjct: 243 FVGNALTDMYSKAGDMESASNV 264



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 15/171 (8%)

Query: 47  SNSGEIDEAGQLFEKMS----DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWS 102
           +N   +++  QL  ++     D D F  + ++  Y   G L  A + F+E        W+
Sbjct: 320 ANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWN 379

Query: 103 SLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT 162
           SL+  +  +GL  +A + F +M   G +P+  T  ++L  CS  GL++ G  +  Y++  
Sbjct: 380 SLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYF-YSMDK 438

Query: 163 CFDLNAFVVTG------LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
            +     VV G      ++D+  +   + EA+      P   N   W + +
Sbjct: 439 TYG----VVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 485



 Score = 47.8 bits (112), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 91/227 (40%), Gaps = 25/227 (11%)

Query: 43  LVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK----N 97
           LVD +   G ++ A Q F+++ D     WN++++ +   G  ++A K F     +    N
Sbjct: 350 LVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPN 409

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
             T+ SL+ G S+ GL  E  + F+ M +  G  P +     V+ L    G L+  ++F 
Sbjct: 410 AITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFI 469

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKC-------IFEAEYLFKMFPDGKNHVAWTTMITG 209
               +  F+ NAF   G       C+           AE L K+ P  KN  A   +   
Sbjct: 470 N---RMPFEPNAF---GWCSFLGACRIHGDKEMGKLAAEKLVKLEP--KNSGALVLLSNI 521

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
           Y+      +  E  R +R+   + N    P             FGA+
Sbjct: 522 YANE----RQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAE 564


>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 773

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 271/747 (36%), Positives = 430/747 (57%), Gaps = 39/747 (5%)

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
           Y++   L ++ +LFN   F     W S+I  Y+++GL  ++   F  M   G  P     
Sbjct: 52  YSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVF 111

Query: 137 DNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD 196
            +VL+ C++   L  GE  HGY I+   D + +    L++MY+K + + ++         
Sbjct: 112 PSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKS--------- 162

Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECF---RDMRVEGVESNQFTFPSILTACAAVSARDF 253
           G+  +  + ++   ++     +        +  +V  +E+  +          +  +R+F
Sbjct: 163 GRQRLGASQVLDEMTERTRSVRTASVLVGNQGRKVSDIEAFNYD--------VSCRSREF 214

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYA-----------KCGDLDSARRLLEYSEIDNEV 302
            AQV         E +   +S   +M A               +DS R++ E     + V
Sbjct: 215 EAQV--------LEIDYKPRSEYREMEACNLGQQIKDISHSMSVDSVRKIFEMMPEKDLV 266

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SWN++I G AR G + E L++ ++M   ++K D FT  SVL   A N+D++  K +H   
Sbjct: 267 SWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCS 326

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           ++ G +   +V ++LIDMYAK   +  ++ VF L+ ++D ISW S+I GC  +G ++E L
Sbjct: 327 IRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGL 386

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
           K+F  M ++ I P     SSI+ ACA LT L  G+Q+H    ++G   ++ + +SLV +Y
Sbjct: 387 KFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMY 446

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
           AKCG I  A ++FD M  RD+++WTA+IMGCA +G   +A++ ++QM   G +P+Y+ F+
Sbjct: 447 AKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFM 506

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
            +L ACSHAGL + A  YF SM   +GI PG +HYA + DLLGR+G+L EA   +  M  
Sbjct: 507 AVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPI 566

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
            P  +VW  LLSACRVH ++++ E+ AN + E++P N   Y+ L+N+YS A +W++AA+ 
Sbjct: 567 GPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSAARRWKEAAKW 626

Query: 663 RKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDM 722
           R  ++  GIRK P CSW+E  ++V+ F++ D  HP    I   ++ +M L+++ GYVPD 
Sbjct: 627 RASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREAMEVLMELMEKEGYVPDT 686

Query: 723 NFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAV 782
           +   H+VEEE K+  +  HSE+LA+ FG++  P G  IR+ KNLRVC DCHTA K+IS +
Sbjct: 687 SEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGTTIRVTKNLRVCTDCHTATKFISKI 746

Query: 783 YLRHIILRDSNRFHHFKAGNCSCGDYW 809
             R I++RD++RFHHFK G CSCGDYW
Sbjct: 747 VGREIVVRDNSRFHHFKNGTCSCGDYW 773



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 222/435 (51%), Gaps = 25/435 (5%)

Query: 29  VGNSVKPASDLNRALVDFSNSGEIDEAGQLFE-------KMSDRDGFTWNTMIAAYANSG 81
           VGN  +  SD+     D S      EA Q+ E       +  + +       I   ++S 
Sbjct: 190 VGNQGRKVSDIEAFNYDVSCRSREFEA-QVLEIDYKPRSEYREMEACNLGQQIKDISHSM 248

Query: 82  RLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLR 141
            +   +K+F   P K+  +W+++I G +  GL  E   +  +M     +P  +TL +VL 
Sbjct: 249 SVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLP 308

Query: 142 LCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHV 201
           L +    + +G++ HG +I+   D   +V + L+DMYAKC  + ++  +F +  + ++ +
Sbjct: 309 LIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTE-RDGI 367

Query: 202 AWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI 261
           +W ++I G  QNG   + ++ FR M +  ++   ++F SI+ ACA ++    G Q+HG I
Sbjct: 368 SWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYI 427

Query: 262 LSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEAL 321
             +GF+ N+++ S+L+DMYAKCG++ +AR++ +   + + VSW +MI+G A  G   +A+
Sbjct: 428 TRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAI 487

Query: 322 SLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLI----VKTGFEGYKFVNNA 376
            LF++M    I+ +   + +VL  C  + +     K  +S+     +  G E Y  V+  
Sbjct: 488 ELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVS-- 545

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEALKYFSDMRISGICP 435
             D+  + G L+ A+     M      S W +L++ C  H + + A K  +  RI  + P
Sbjct: 546 --DLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVAN--RILEVDP 601

Query: 436 D----HVVVSSILSA 446
                ++++++I SA
Sbjct: 602 KNTGAYILLANIYSA 616



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 123/466 (26%), Positives = 213/466 (45%), Gaps = 57/466 (12%)

Query: 177 MYAKCKCIFEAEYLFKM--FPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           +Y+    + ++  LF    FP     +AW ++I  Y+ +G   K++  F  M   G+  +
Sbjct: 51  IYSHINLLHDSLRLFNTLHFPPA---LAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPD 107

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR--- 291
              FPS+L ACA +   + G  +HG I+  G + ++Y  +AL++MY+K   L  + R   
Sbjct: 108 HNVFPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRL 167

Query: 292 -----LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLF--------KKMHARDIKIDDFT 338
                L E +E    V   S++VG   QG     +  F        ++  A+ ++ID   
Sbjct: 168 GASQVLDEMTERTRSVRTASVLVG--NQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKP 225

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
                   A N+        HS+                        ++D    +F +M 
Sbjct: 226 RSEYREMEACNLGQQIKDISHSM------------------------SVDSVRKIFEMMP 261

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
           +KD++SW ++I G A +G Y E L    +M  + + PD   +SS+L   AE   +  G++
Sbjct: 262 EKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKE 321

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK 518
           +H   ++ G  + + V +SL+ +YAKC  + D+ RVF  +  RD I+W ++I GC QNG 
Sbjct: 322 IHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGL 381

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH-- 576
             E L+F+ QML    KP   +F  ++ AC+H         +       Y  + G D   
Sbjct: 382 FDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHL-----TTLHLGKQLHGYITRNGFDENI 436

Query: 577 --YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
              + ++D+  + G +  A+ + D+M    D   W A++  C +HG
Sbjct: 437 FIASSLVDMYAKCGNIRTARQIFDRMRLR-DMVSWTAMIMGCALHG 481



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 93/410 (22%), Positives = 172/410 (41%), Gaps = 47/410 (11%)

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID-MYAKCGDLDSARR 291
           S +    S+L    ++ +R    Q+H  +L   F+A+     +L+  +Y+    L  + R
Sbjct: 6   STEALVNSLLRNPLSIKSRSQAQQLHAQVLK--FQASSLCNLSLLLSIYSHINLLHDSLR 63

Query: 292 LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID 351
           L         ++W S+I  +   G   ++L  F  M A  +  D   +PSVL   A  +D
Sbjct: 64  LFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMD 123

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD-------CAFMVFNLMQD--KDV 402
           LN  +S+H  I++ G +   +  NAL++MY+K   L         A  V + M +  + V
Sbjct: 124 LNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSV 183

Query: 403 ISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVS-SILSACAELTVLEFGQQVHA 461
            + + L+       S  EA  Y    R        + +     S   E+     GQQ+  
Sbjct: 184 RTASVLVGNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYREMEACNLGQQIKD 243

Query: 462 VFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKE 521
           +        S+SVD+                ++F+ M  +D+++W  +I G A+NG   E
Sbjct: 244 I------SHSMSVDS--------------VRKIFEMMPEKDLVSWNTIIAGNARNGLYGE 283

Query: 522 ALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPGPDH--- 576
            L    +M     KPD  T   +L       +AEN         +++G  I+ G D    
Sbjct: 284 TLTMVREMGGANLKPDSFTLSSVL-----PLIAENVD--ISKGKEIHGCSIRQGLDAEVY 336

Query: 577 -YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELG 625
             + +ID+  +  +++++  +   ++ E D   W ++++ C  +G  + G
Sbjct: 337 VASSLIDMYAKCTRVVDSYRVF-TLLTERDGISWNSIIAGCVQNGLFDEG 385



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 135/332 (40%), Gaps = 45/332 (13%)

Query: 380 MYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVV 439
           +Y+    L  +  +FN +     ++W S+I     HG   ++L  F  M  SG+ PDH V
Sbjct: 51  IYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNV 110

Query: 440 VSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR------ 493
             S+L ACA L  L  G+ +H   ++ G    L   N+L+ +Y+K   +  + R      
Sbjct: 111 FPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGAS 170

Query: 494 -VFDSM--HTRDVITWTALIMGCAQNGKGKEAL---------QFYDQMLARGTKP----- 536
            V D M   TR V T + L+    +     EA          +F  Q+L    KP     
Sbjct: 171 QVLDEMTERTRSVRTASVLVGNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYR 230

Query: 537 --DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD--HYACMIDLLGRSGKLIE 592
             +       +   SH+   ++ R  FE M       P  D   +  +I    R+G   E
Sbjct: 231 EMEACNLGQQIKDISHSMSVDSVRKIFEMM-------PEKDLVSWNTIIAGNARNGLYGE 283

Query: 593 AKALLDQMVG---EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYV--QLS 647
              ++ +M G   +PD+    ++L     + D+  G+         + ++A  YV   L 
Sbjct: 284 TLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIR-QGLDAEVYVASSLI 342

Query: 648 NMYSTAGKWEDAARVRKLMKSRGIRKEPGCSW 679
           +MY+   +  D+ RV  L+  R      G SW
Sbjct: 343 DMYAKCTRVVDSYRVFTLLTERD-----GISW 369


>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 303/761 (39%), Positives = 440/761 (57%), Gaps = 50/761 (6%)

Query: 99  FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
           F W+ LI    + G   +  +L+ +MQ  G+RP  YT   VL+ C      + G   H  
Sbjct: 111 FWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAV 170

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF-KMFPDG-KNHVAWTTMITGYSQNGYG 216
              + F+ N FV  GLV MY +C     A  +F +M   G  + V+W +++  Y Q G  
Sbjct: 171 VFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDS 230

Query: 217 FKAIECFRDMRVE-GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSA 275
            +A++ F  M  + G+  +  +  ++L ACA+V A   G QVHG  L SG   +V+V +A
Sbjct: 231 IRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNA 290

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           ++DMYAKCG ++ A ++ E  ++ + VSWN+M+ G+++ G   +AL LF+K+    I+++
Sbjct: 291 VVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELN 350

Query: 336 DFTYPSVLNCFASN------IDL----------NNAKSVHSLIVKTGFEGYKF------- 372
             T+ +V+  +A        +D+           N  ++ SL+      G          
Sbjct: 351 VVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHC 410

Query: 373 -------------------VNNALIDMYAKQGNLDCAFMVFNLM--QDKDVISWTSLITG 411
                              V NALIDMY+K  +   A  +F+L+  +D+ V++WT LI G
Sbjct: 411 HAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGG 470

Query: 412 CAYHGSYEEALKYFSDMRISG--ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
            A HG   EAL+ FS M      + P+   +S  L ACA L  L FG+Q+HA  L++   
Sbjct: 471 NAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFE 530

Query: 470 SS-LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
           S+ L V N L+ +Y+K G ++ A  VFD+MH R+ ++WT+L+ G   +G+G+EALQ + +
Sbjct: 531 SAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYE 590

Query: 529 MLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSG 588
           M      PD +TFV +L+ACSH+G+ +    YF  M+K +G+ PG +HYACM+DLL R+G
Sbjct: 591 MQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAG 650

Query: 589 KLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSN 648
           +L EA  L+  M  +P   VW ALLSACRV+ ++ELGE AAN L ELE  N   Y  LSN
Sbjct: 651 RLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSN 710

Query: 649 MYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDE 708
           +Y+ A  W+D AR+R LMK+ GI+K PGCSWV+       F + D  HP+   IY  + +
Sbjct: 711 IYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRD 770

Query: 709 IMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRV 768
           +M  IK  GYVPD  FALH+V++E K   L+ HSEKLA+A+G+LT   GAPIRI KNLR 
Sbjct: 771 LMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRA 830

Query: 769 CGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           CGDCH+A  YIS +    II+RDS+RFHHFK G+CSC  YW
Sbjct: 831 CGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 871



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 148/530 (27%), Positives = 243/530 (45%), Gaps = 71/530 (13%)

Query: 172 TGLVDMYAKCKCIFEA-EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG 230
           T ++ MY       +A   L ++ P       W  +I      G+    ++ +R M+  G
Sbjct: 81  THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLG 140

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
              + +TFP +L AC  + +   GA VH  + +SGFE NV+V + L+ MY +CG  ++AR
Sbjct: 141 WRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENAR 200

Query: 291 RLLEYSE---IDNEVSWNSMIVGFARQGFHKEALSLFKKM-HARDIKIDDFTYPSVLNCF 346
           ++ +      + + VSWNS++  + + G    A+ +F++M     I+ D  +  +VL   
Sbjct: 201 QVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPAC 260

Query: 347 ASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWT 406
           AS    +  K VH   +++G     FV NA++DMYAK G ++ A  VF  M+ KDV+SW 
Sbjct: 261 ASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWN 320

Query: 407 SLITGCAYHGSYE-----------------------------------EALKYFSDMRIS 431
           +++TG +  G ++                                   EAL  F  M + 
Sbjct: 321 AMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLC 380

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLK-------SGGCSSLSVDNSLVLVYAK 484
           G  P+ V + S+LS CA    L  G++ H   +K       +     L V N+L+ +Y+K
Sbjct: 381 GSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSK 440

Query: 485 CGCINDANRVFDSMHTRD--VITWTALIMGCAQNGKGKEALQFYDQMLARG--TKPDYIT 540
           C     A  +FD +  +D  V+TWT LI G AQ+G+  EAL+ + QML       P+  T
Sbjct: 441 CKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFT 500

Query: 541 FVGLLFACSHAGLAENARWY--------FESMDKVYGIKPGPDHYACMIDLLGRSGKLIE 592
               L AC+  G     R          FES               C+ID+  +SG +  
Sbjct: 501 ISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVA--------NCLIDMYSKSGDVDA 552

Query: 593 AKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           A+ + D M  + +   W +L++   +HG    GE A    +E++ +  +P
Sbjct: 553 ARVVFDNM-HQRNGVSWTSLMTGYGMHGR---GEEALQIFYEMQKVXLVP 598



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/410 (32%), Positives = 208/410 (50%), Gaps = 40/410 (9%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN----ET 93
           +  A+VD ++  G ++EA ++FE+M  +D  +WN M+  Y+  GR  +A  LF     E 
Sbjct: 287 VGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEK 346

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE 153
              N  TWS++I GY+  GL  EA ++F QM L G  P+  TL ++L  C+  G L  G+
Sbjct: 347 IELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGK 406

Query: 154 QFHGYAIKTCFDLNA-------FVVTGLVDMYAKCKCIFEAEYLFKMFP-DGKNHVAWTT 205
           + H +AIK   +L+         V+  L+DMY+KCK    A  +F + P   ++ V WT 
Sbjct: 407 ETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTV 466

Query: 206 MITGYSQNGYGFKAIECFRDMRVEG--VESNQFTFPSILTACAAVSARDFGAQVHGCILS 263
           +I G +Q+G   +A+E F  M      V  N FT    L ACA + A  FG Q+H  +L 
Sbjct: 467 LIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLR 526

Query: 264 SGFE-ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
           + FE A ++V + LIDMY+K GD+D+AR + +     N VSW S++ G+   G  +EAL 
Sbjct: 527 NRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQ 586

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN------- 375
           +F +M    +  D  T+  VL   +           HS +V  G   +  +N        
Sbjct: 587 IFYEMQKVXLVPDGVTFVVVLYACS-----------HSGMVDQGINYFNGMNKDFGVVPG 635

Query: 376 -----ALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYE 419
                 ++D+ ++ G LD A  +   M  K   + W +L++ C  + + E
Sbjct: 636 AEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVE 685


>gi|414879360|tpg|DAA56491.1| TPA: hypothetical protein ZEAMMB73_164599 [Zea mays]
          Length = 520

 Score =  536 bits (1380), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 264/511 (51%), Positives = 353/511 (69%), Gaps = 3/511 (0%)

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS-NIDLNNAKSVHS 360
           V++N+ I   AR G +  AL+LF++M  R ++ D++T P +LN  A          ++H+
Sbjct: 10  VAYNAAISRCARAGLYARALALFREMRGRGLRADEYTLPPLLNSAAQLRGPPEAVAALHA 69

Query: 361 LIVKTGFEGYKFVNNALIDMYAK--QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           L+++ G   +  V NAL+D YA+        A  VF+ M  +DV++WTSL+TG A  G++
Sbjct: 70  LLLRAGLAPHLHVANALVDAYARLPHAGAAAARAVFDEMPRRDVVTWTSLLTGLARAGAH 129

Query: 419 EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSL 478
             A++ +  M  SG+ PD   V + LS+CA  T L+ G+ VHA  ++ G     SV+NSL
Sbjct: 130 GAAVRAYHGMVASGVQPDEFAVPAALSSCAASTALDLGRSVHAAAVRLGLRPFRSVENSL 189

Query: 479 VLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDY 538
           V +YAK G + DA  VFD+M  R  ITWTALI+G AQNG+G+++L+ Y  M+  G +PDY
Sbjct: 190 VSMYAKTGALRDARAVFDAMPARCTITWTALIVGYAQNGRGRQSLEVYADMVRSGCRPDY 249

Query: 539 ITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLD 598
           +TF+GLLFACSHAGL +  R +F SM  VYGI PGPDHYACM+DLLGR+G+L EA  LL+
Sbjct: 250 VTFIGLLFACSHAGLVDAGRAHFRSMVPVYGIAPGPDHYACMVDLLGRAGRLDEAMDLLN 309

Query: 599 QMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWED 658
           +   E DATVWK+LL ACRVH + EL ERAA  ++ L+P +A+PYV LSN+YS A +W D
Sbjct: 310 RSSTELDATVWKSLLGACRVHQNAELAERAAEMVWRLDPADAVPYVMLSNLYSRARRWGD 369

Query: 659 AARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGY 718
            AR+R LMK+RG+ KEPGCSWV  N   H+F  EDR HP   +IY K++E+   I+  GY
Sbjct: 370 VARIRALMKARGVTKEPGCSWVGVNGITHLFHVEDRDHPRAAEIYRKVEEMTERIRVEGY 429

Query: 719 VPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKY 778
           VPD ++AL +   E ++ GLAYHSE+LAVAFGLL +P  APIR+FKNLRVCGDCHTA+K 
Sbjct: 430 VPDTDWALQDEVPEWRQRGLAYHSERLAVAFGLLAVPAAAPIRVFKNLRVCGDCHTAIKM 489

Query: 779 ISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           ++ VY R IILRD+N FHH K G CSCGDYW
Sbjct: 490 VAKVYGREIILRDANCFHHMKDGECSCGDYW 520



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 184/357 (51%), Gaps = 8/357 (2%)

Query: 194 FPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV-SARD 252
            P G   VA+   I+  ++ G   +A+  FR+MR  G+ ++++T P +L + A +    +
Sbjct: 3   LPAGTVVVAYNAAISRCARAGLYARALALFREMRGRGLRADEYTLPPLLNSAAQLRGPPE 62

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE--VSWNSMIVG 310
             A +H  +L +G   +++V +AL+D YA+     +A     + E+     V+W S++ G
Sbjct: 63  AVAALHALLLRAGLAPHLHVANALVDAYARLPHAGAAAARAVFDEMPRRDVVTWTSLLTG 122

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
            AR G H  A+  +  M A  ++ D+F  P+ L+  A++  L+  +SVH+  V+ G   +
Sbjct: 123 LARAGAHGAAVRAYHGMVASGVQPDEFAVPAALSSCAASTALDLGRSVHAAAVRLGLRPF 182

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
           + V N+L+ MYAK G L  A  VF+ M  +  I+WT+LI G A +G   ++L+ ++DM  
Sbjct: 183 RSVENSLVSMYAKTGALRDARAVFDAMPARCTITWTALIVGYAQNGRGRQSLEVYADMVR 242

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLVLVYAKCGCI 488
           SG  PD+V    +L AC+   +++ G+      +   G +    D+   +V +  + G +
Sbjct: 243 SGCRPDYVTFIGLLFACSHAGLVDAGRAHFRSMVPVYGIAP-GPDHYACMVDLLGRAGRL 301

Query: 489 NDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           ++A  + +   T  D   W +L+  C  + +  E  +   +M+ R    D + +V L
Sbjct: 302 DEAMDLLNRSSTELDATVWKSLLGACRVH-QNAELAERAAEMVWRLDPADAVPYVML 357



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 129/301 (42%), Gaps = 8/301 (2%)

Query: 71  NTMIAAYAN--SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG 128
           N ++ AYA         A+ +F+E P ++  TW+SL+ G +  G    A   +  M   G
Sbjct: 84  NALVDAYARLPHAGAAAARAVFDEMPRRDVVTWTSLLTGLARAGAHGAAVRAYHGMVASG 143

Query: 129 YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
            +P ++ +   L  C+    L  G   H  A++        V   LV MYAK   + +A 
Sbjct: 144 VQPDEFAVPAALSSCAASTALDLGRSVHAAAVRLGLRPFRSVENSLVSMYAKTGALRDAR 203

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
            +F   P  +  + WT +I GY+QNG G +++E + DM   G   +  TF  +L AC+  
Sbjct: 204 AVFDAMP-ARCTITWTALIVGYAQNGRGRQSLEVYADMVRSGCRPDYVTFIGLLFACSHA 262

Query: 249 SARDFG-AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS--EIDNEVSWN 305
              D G A     +   G        + ++D+  + G LD A  LL  S  E+D  V W 
Sbjct: 263 GLVDAGRAHFRSMVPVYGIAPGPDHYACMVDLLGRAGRLDEAMDLLNRSSTELDATV-WK 321

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           S++ G  R   + E      +M  R    D   Y  + N ++      +   + +L+   
Sbjct: 322 SLL-GACRVHQNAELAERAAEMVWRLDPADAVPYVMLSNLYSRARRWGDVARIRALMKAR 380

Query: 366 G 366
           G
Sbjct: 381 G 381


>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  536 bits (1380), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 278/745 (37%), Positives = 432/745 (57%), Gaps = 6/745 (0%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKN-FFTWSSLIYGYSNYGLDIEAFELFWQMQL 126
           F  N+++A YA    +  A+KLF+    +N   +W+S+I  YS  G+  EA  LF +M  
Sbjct: 94  FVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLK 153

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
            G   + YT    L+ C     ++ G Q H   +K+   L+ +V   LV MY +   + E
Sbjct: 154 AGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPE 213

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A  +F    +GK+ V W +M+TG+ QNG   +A+E F D++   ++ +Q +  SI+ A  
Sbjct: 214 AAVIFGNL-EGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASG 272

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            +     G ++H   + +GF++N+ V + LIDMYAKC  +    R  +     + +SW +
Sbjct: 273 RLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTT 332

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKT 365
              G+A+   + +AL L +++    + +D     S+L  C   N  L   K +H   ++ 
Sbjct: 333 AAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNC-LGKIKEIHGYTIRG 391

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G      + N +ID+Y + G +D A  +F  ++ KDV+SWTS+I+   ++G   +AL+ F
Sbjct: 392 GLSD-PVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVF 450

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
           S M+ +G+ PD+V + SILSA   L+ L+ G+++H   ++ G     S+ N+LV +YA+C
Sbjct: 451 SSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARC 510

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G + DA ++F     R++I WTA+I     +G G+ A++ + +M      PD+ITF+ LL
Sbjct: 511 GSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALL 570

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
           +ACSH+GL    + + E M   Y ++P P+HY C++DLLGR   L EA  ++  M  EP 
Sbjct: 571 YACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPT 630

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
             VW ALL ACR+H + E+GE AA  L EL+  N   YV +SN+++  G+W+D   VR  
Sbjct: 631 PEVWCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMR 690

Query: 666 MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIM-LLIKEAGYVPDMNF 724
           MK  G+ K PGCSW+E  +++H F+S D+ HP    IY K+ ++   L +E GYV    F
Sbjct: 691 MKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQVTEKLKREGGYVAQTKF 750

Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
            LHNV EE K   L  HSE+LA+A+GLL   +G PIR+ KNLRVCGDCH+    +S  + 
Sbjct: 751 VLHNVGEEEKVQMLYGHSERLAIAYGLLATAEGTPIRVTKNLRVCGDCHSFCTLVSRFFE 810

Query: 785 RHIILRDSNRFHHFKAGNCSCGDYW 809
           R +I+RD++RFHHFK G CSCGD+W
Sbjct: 811 RELIVRDASRFHHFKDGMCSCGDFW 835



 Score =  291 bits (746), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 180/567 (31%), Positives = 295/567 (52%), Gaps = 8/567 (1%)

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
           Y   G + +A+ +F++   ++ FTW++++ GY + G  + A E++ +M+  G     YT 
Sbjct: 2   YGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTF 61

Query: 137 DNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD 196
             +L+ C +   L  G + HG AIK   D   FVV  LV +YAKC  I  A  LF     
Sbjct: 62  PVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYV 121

Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
             + V+W ++I+ YS NG   +A+  F +M   GV +N +TF + L AC   S    G Q
Sbjct: 122 RNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQ 181

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           +H  IL SG   +VYV +AL+ MY + G +  A  +    E  + V+WNSM+ GF + G 
Sbjct: 182 IHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGL 241

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
           + EAL  F  +   D+K D  +  S++        L N K +H+  +K GF+    V N 
Sbjct: 242 YSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNT 301

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           LIDMYAK   +      F+LM  KD+ISWT+   G A +  Y +AL+    +++ G+  D
Sbjct: 302 LIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVD 361

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFD 496
             ++ SIL AC  L  L   +++H   ++ GG S   + N+++ VY +CG I+ A R+F+
Sbjct: 362 ATMIGSILLACRGLNCLGKIKEIHGYTIR-GGLSDPVLQNTIIDVYGECGIIDYAVRIFE 420

Query: 497 SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA-CSHAGLAE 555
           S+  +DV++WT++I     NG   +AL+ +  M   G +PDY+T V +L A CS + L +
Sbjct: 421 SIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKK 480

Query: 556 NARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
               +   + K + ++    +   ++D+  R G + +A  +        +  +W A++SA
Sbjct: 481 GKEIHGFIIRKGFILEGSISN--TLVDMYARCGSVEDAYKIF-TCTKNRNLILWTAMISA 537

Query: 616 CRVHGDLELGERAANNLFELEPMNAMP 642
             +HG    GE A      ++    +P
Sbjct: 538 YGMHG---YGEAAVELFMRMKDEKIIP 561



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 146/450 (32%), Positives = 244/450 (54%), Gaps = 12/450 (2%)

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           MY KC  + +AE +F    + ++   W  M+ GY  NG    A+E +R+MR  GV  + +
Sbjct: 1   MYGKCGSVLDAEMIFDKMSE-RSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSY 59

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           TFP +L AC  V     GA++HG  +  G ++ V+V ++L+ +YAKC D++ AR+L +  
Sbjct: 60  TFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRM 119

Query: 297 EIDNE-VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
            + N+ VSWNS+I  ++  G   EAL LF +M    +  + +T+ + L     +  +   
Sbjct: 120 YVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLG 179

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
             +H+ I+K+G     +V NAL+ MY + G +  A ++F  ++ KD+++W S++TG   +
Sbjct: 180 MQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQN 239

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G Y EAL++F D++ + + PD V + SI+ A   L  L  G+++HA  +K+G  S++ V 
Sbjct: 240 GLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVG 299

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           N+L+ +YAKC C++   R FD M  +D+I+WT    G AQN    +AL+   Q+   G  
Sbjct: 300 NTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMD 359

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPG---PDHYACMIDLLGRSGKLIE 592
            D      +L AC   GL  N     + +   Y I+ G   P     +ID+ G  G +I+
Sbjct: 360 VDATMIGSILLACR--GL--NCLGKIKEIHG-YTIRGGLSDPVLQNTIIDVYGECG-IID 413

Query: 593 AKALLDQMVGEPDATVWKALLSACRVHGDL 622
               + + +   D   W +++S C VH  L
Sbjct: 414 YAVRIFESIECKDVVSWTSMIS-CYVHNGL 442



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 138/454 (30%), Positives = 232/454 (51%), Gaps = 12/454 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +  N ++A Y   G++ EA  +F     K+  TW+S++ G+   GL  EA E F+ +Q
Sbjct: 194 DVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQ 253

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
               +P Q ++ +++      G L  G++ H YAIK  FD N  V   L+DMYAKC C+ 
Sbjct: 254 NADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMS 313

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
                F +    K+ ++WTT   GY+QN    +A+E  R +++EG++ +     SIL AC
Sbjct: 314 YGGRAFDLMAH-KDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLAC 372

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
             ++      ++HG  +  G    V +Q+ +ID+Y +CG +D A R+ E  E  + VSW 
Sbjct: 373 RGLNCLGKIKEIHGYTIRGGLSDPV-LQNTIIDVYGECGIIDYAVRIFESIECKDVVSWT 431

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           SMI  +   G   +AL +F  M    ++ D  T  S+L+   S   L   K +H  I++ 
Sbjct: 432 SMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRK 491

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           GF     ++N L+DMYA+ G+++ A+ +F   +++++I WT++I+    HG  E A++ F
Sbjct: 492 GFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELF 551

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD-----NSLVL 480
             M+   I PDH+   ++L AC+   ++  G+     FL+   C             LV 
Sbjct: 552 MRMKDEKIIPDHITFLALLYACSHSGLVNEGKS----FLEIMKCEYQLEPWPEHYTCLVD 607

Query: 481 VYAKCGCINDANRVFDSMHTRDVI-TWTALIMGC 513
           +  +  C+ +A ++  SM        W AL+  C
Sbjct: 608 LLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGAC 641



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 126/484 (26%), Positives = 226/484 (46%), Gaps = 64/484 (13%)

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
           MY KCG +  A  + +     +  +WN+M+ G+   G    AL ++++M    +  D +T
Sbjct: 1   MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
           +P +L       DL     +H L +K G + + FV N+L+ +YAK  +++ A  +F+ M 
Sbjct: 61  FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120

Query: 399 DK-DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
            + DV+SW S+I+  + +G   EAL  FS+M  +G+  +    ++ L AC + + ++ G 
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
           Q+HA  LKSG    + V N+LV +Y + G + +A  +F ++  +D++TW +++ G  QNG
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPG---- 573
              EAL+F+  +     KPD ++ + ++ A    G   N +         Y IK G    
Sbjct: 241 LYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEI-----HAYAIKNGFDSN 295

Query: 574 -------PDHYA--CMIDLLGRSGKLIEAKALLD------------------------QM 600
                   D YA  C +   GR+  L+  K L+                         QM
Sbjct: 296 ILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQM 355

Query: 601 VG-EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ--LSNMYSTAGKWE 657
            G + DAT+  ++L ACR  G   LG+    + + +    + P +Q  + ++Y   G  +
Sbjct: 356 EGMDVDATMIGSILLACR--GLNCLGKIKEIHGYTIRGGLSDPVLQNTIIDVYGECGIID 413

Query: 658 DAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAG 717
            A R+ + ++ + +      SW    S +  ++           + +K  E+   +KE G
Sbjct: 414 YAVRIFESIECKDV-----VSW---TSMISCYV--------HNGLANKALEVFSSMKETG 457

Query: 718 YVPD 721
             PD
Sbjct: 458 LEPD 461



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 203/433 (46%), Gaps = 45/433 (10%)

Query: 55  AGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLD 114
            G+ F+ M+ +D  +W T  A YA +       K +                        
Sbjct: 315 GGRAFDLMAHKDLISWTTAAAGYAQN-------KCY------------------------ 343

Query: 115 IEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
           ++A EL  Q+Q+EG       + ++L  C     L + ++ HGY I+     +  +   +
Sbjct: 344 LQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLS-DPVLQNTI 402

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           +D+Y +C  I  A  +F+   + K+ V+WT+MI+ Y  NG   KA+E F  M+  G+E +
Sbjct: 403 IDVYGECGIIDYAVRIFESI-ECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPD 461

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
             T  SIL+A  ++S    G ++HG I+  GF     + + L+DMYA+CG ++ A ++  
Sbjct: 462 YVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFT 521

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
            ++  N + W +MI  +   G+ + A+ LF +M    I  D  T+ ++L   + +  +N 
Sbjct: 522 CTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNE 581

Query: 355 AKSVHSLI-VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGC 412
            KS   ++  +   E +      L+D+  ++  L+ A+ +   MQ++     W +L+  C
Sbjct: 582 GKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGAC 641

Query: 413 AYHGSYE----EALKYFS-DMRISGICPDHVVVSSILSACAELT-VLEFGQQVHAVFL-K 465
             H + E     A K    D+   G   ++V+VS++ +A      V E   ++    L K
Sbjct: 642 RIHSNKEIGEVAAEKLLELDLDNPG---NYVLVSNVFAANGRWKDVEEVRMRMKGSGLTK 698

Query: 466 SGGCSSLSVDNSL 478
           + GCS + V N +
Sbjct: 699 NPGCSWIEVGNKI 711


>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 823

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 284/744 (38%), Positives = 423/744 (56%), Gaps = 1/744 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N ++  YA  G L  A++LF+  P +N  ++ +L+ GY+  G   EA ELF ++Q
Sbjct: 81  DTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQ 140

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            EG+  + + L  +L++             H  A K   D NAFV T L+D Y+ C  + 
Sbjct: 141 REGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVC 200

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A  +F     GK+ V WT M++ YS+N     A+  F  MR+ G + N F   S L A 
Sbjct: 201 HARCVFDGIV-GKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAA 259

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
             +S+   G  +HGC + + ++   +V  AL+DMYAKCGD++ A  + E    D+ + W+
Sbjct: 260 VCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWS 319

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
            +I  +A+   +++A  +F +M    +  ++F+   VL   A+   L   + +H+L +K 
Sbjct: 320 FLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKL 379

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G+E   FV NAL+DMYAK  N++ +  +F+ +QD + +SW ++I G    G  E+AL  F
Sbjct: 380 GYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVF 439

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
            +MR + +    V  SS+L ACA  + ++   Q+H++  KS   +   V NSL+  YAKC
Sbjct: 440 HEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKC 499

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G I DA +VF+S+   DV++W ++I   A +G+   AL+ +D+M     K + +TFV LL
Sbjct: 500 GFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLL 559

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
             C   GL     W F SM   + IKP  +HY C++ LLGR+G+L +A   +  +   P 
Sbjct: 560 SVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPS 619

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
             VW+ALLS+C VH ++ LG  AA  + ++EP +   YV LSNMY+ AG  ++ A  RK 
Sbjct: 620 PMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGILDEVALWRKS 679

Query: 666 MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFA 725
           M++ G++KE G SWVE   +VH F      HP    I + ++ + L     GYVPD+N  
Sbjct: 680 MRNVGVKKEAGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDINVV 739

Query: 726 LHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLR 785
           LH+V+EE K   L  HSE+LA+A+GL   P G PIRI KNLR C DCHT  K IS +  R
Sbjct: 740 LHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDCHTMFKVISKIVQR 799

Query: 786 HIILRDSNRFHHFKAGNCSCGDYW 809
            II+RD NRFHHF+ G CSCGDYW
Sbjct: 800 EIIVRDINRFHHFEEGICSCGDYW 823



 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 160/513 (31%), Positives = 270/513 (52%), Gaps = 11/513 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           DR+ F    +I AY+  G +  A+ +F+    K+  TW++++  YS   +   A   F +
Sbjct: 180 DRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSK 239

Query: 124 MQLEGYRPSQYTLDNVLR--LCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
           M++ G++P+ + L + L+  +C    LL +G   HG ++KT +D    V   L+DMYAKC
Sbjct: 240 MRMTGFKPNPFVLTSALKAAVCLSSALLGKG--IHGCSVKTLYDTEPHVGGALLDMYAKC 297

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
             I +A  +F+M P   + + W+ +I+ Y+Q+    +A E F  M    V  N+F+   +
Sbjct: 298 GDIEDAHAIFEMIPH-DDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGV 356

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           L ACA ++  + G Q+H   +  G+E+ ++V +AL+DMYAKC +++++  +    +  NE
Sbjct: 357 LQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANE 416

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           VSWN++IVG+ + GF ++ALS+F +M A  +     T+ SVL   A+   + +A  +HSL
Sbjct: 417 VSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSL 476

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           I K+ F     V N+LID YAK G +  A  VF  + + DV+SW S+I+  A HG    A
Sbjct: 477 IEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNA 536

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV-HAVFLKSGGCSSLSVDNSLVL 480
           L+ F  M  S I  + V   S+LS C    ++  G  + +++ +      S+     +V 
Sbjct: 537 LELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVR 596

Query: 481 VYAKCGCINDANR-VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP-DY 538
           +  + G + DA + + D   T   + W AL+  C  +     AL  Y        +P D 
Sbjct: 597 LLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVH--KNVALGRYAAEKVLDIEPHDE 654

Query: 539 ITFVGLLFACSHAGLAENARWYFESMDKVYGIK 571
            T+V L    + AG+ +    + +SM  V G+K
Sbjct: 655 TTYVLLSNMYAAAGILDEVALWRKSMRNV-GVK 686



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 166/316 (52%), Gaps = 2/316 (0%)

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEA--NVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
           L  C A      G  VH  ++  G  A  + +  + L++ YAK G L +ARRL +     
Sbjct: 52  LQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPER 111

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           N VS+ +++ G+A +G  +EAL LF+++     +++ F   ++L    +      A  +H
Sbjct: 112 NRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIH 171

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
           +   K G +   FV  ALID Y+  G +  A  VF+ +  KD ++WT++++  + +   E
Sbjct: 172 ACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPE 231

Query: 420 EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
            AL  FS MR++G  P+  V++S L A   L+    G+ +H   +K+   +   V  +L+
Sbjct: 232 YALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALL 291

Query: 480 LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
            +YAKCG I DA+ +F+ +   DVI W+ LI   AQ+ + ++A + + +M+     P+  
Sbjct: 292 DMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEF 351

Query: 540 TFVGLLFACSHAGLAE 555
           +  G+L AC++    E
Sbjct: 352 SLSGVLQACANIAFLE 367



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 6/122 (4%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF---NETPFK- 96
           +L+D ++  G I +A ++FE + + D  +WN++I+AYA  GR   A +LF   N++  K 
Sbjct: 491 SLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKA 550

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVLRLCSLKGLLQRGEQF 155
           N  T+ SL+    + GL  +   LF  M ++   +PS      ++RL    G L    +F
Sbjct: 551 NDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKF 610

Query: 156 HG 157
            G
Sbjct: 611 IG 612


>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 751

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 273/664 (41%), Positives = 404/664 (60%), Gaps = 6/664 (0%)

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP--DGKNHVAWTTM 206
           L +G+Q H   I+     N F+    +++Y+KC    E +Y  K+F     +N V+WT++
Sbjct: 91  LNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCG---ELDYTIKLFDKMSQRNMVSWTSI 147

Query: 207 ITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF 266
           ITG++ N    +A+  F  MR+EG  + QF   S+L AC ++ A  FG QVH  ++  GF
Sbjct: 148 ITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGF 207

Query: 267 EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK 326
              ++V S L DMY+KCG+L  A +  E     + V W SMI GF + G  K+AL+ + K
Sbjct: 208 GCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMK 267

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
           M   D+ ID     S L+  ++    +  KS+H+ I+K GFE   F+ NAL DMY+K G+
Sbjct: 268 MVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGD 327

Query: 387 LDCAFMVFNLMQD-KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
           +  A  VF +  D   ++S T++I G       E+AL  F D+R  GI P+    +S++ 
Sbjct: 328 MVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIK 387

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
           ACA    LE G Q+H   +K        V ++LV +Y KCG  + + ++FD +   D I 
Sbjct: 388 ACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIA 447

Query: 506 WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMD 565
           W  L+   +Q+G G+ A++ ++ M+ RG KP+ +TFV LL  CSHAG+ E+   YF SM+
Sbjct: 448 WNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSME 507

Query: 566 KVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELG 625
           K+YG+ P  +HY+C+IDLLGR+GKL EA+  ++ M  EP+   W + L AC++HGD+E  
Sbjct: 508 KIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERA 567

Query: 626 ERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQ 685
           + AA+ L +LEP N+  +V LSN+Y+   +WED   +RK++K   + K PG SWV+  ++
Sbjct: 568 KFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSWVDIRNK 627

Query: 686 VHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKL 745
            H+F  ED  HP + +IY K+D ++  IK  GYVP     L ++++  KE  L YHSE++
Sbjct: 628 THVFGVEDWSHPQKKEIYEKLDNLLDQIKRIGYVPQTESVLIDMDDNLKEKLLHYHSERI 687

Query: 746 AVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSC 805
           AVAF LLT P G PI + KNLRVC DCH+A+K+IS V  R+II+RD +RFHHF  G+CSC
Sbjct: 688 AVAFSLLTCPTGMPIIVKKNLRVCSDCHSALKFISKVTERNIIVRDISRFHHFSNGSCSC 747

Query: 806 GDYW 809
           GDYW
Sbjct: 748 GDYW 751



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 147/509 (28%), Positives = 261/509 (51%), Gaps = 10/509 (1%)

Query: 30  GNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIA-----AYANSGRLR 84
           G+ +     +   +  ++ + E+++  QL   M  R G   NT ++      Y+  G L 
Sbjct: 69  GHKLSDTKTVAHLIQTYARTKELNKGKQL-HAMLIRGGCLPNTFLSNHFLNLYSKCGELD 127

Query: 85  EAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCS 144
              KLF++   +N  +W+S+I G+++     EA   F QM++EG   +Q+ L +VL+ C+
Sbjct: 128 YTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACT 187

Query: 145 LKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWT 204
             G +Q G Q H   +K  F    FV + L DMY+KC  + +A   F+  P  K+ V WT
Sbjct: 188 SLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMP-CKDAVLWT 246

Query: 205 TMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS 264
           +MI G+ +NG   KA+  +  M  + V  +Q    S L+AC+A+ A  FG  +H  IL  
Sbjct: 247 SMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKL 306

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLE-YSEIDNEVSWNSMIVGFARQGFHKEALSL 323
           GFE   ++ +AL DMY+K GD+ SA  + + +S+  + VS  ++I G+      ++ALS 
Sbjct: 307 GFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALST 366

Query: 324 FKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK 383
           F  +  R I+ ++FT+ S++   A+   L +   +H  +VK  F+   FV++ L+DMY K
Sbjct: 367 FVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGK 426

Query: 384 QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSI 443
            G  D +  +F+ +++ D I+W +L+   + HG    A++ F+ M   G+ P+ V   ++
Sbjct: 427 CGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNL 486

Query: 444 LSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL-VYAKCGCINDANRVFDSM-HTR 501
           L  C+   ++E G    +   K  G        S V+ +  + G + +A    ++M    
Sbjct: 487 LKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEP 546

Query: 502 DVITWTALIMGCAQNGKGKEALQFYDQML 530
           +V  W + +  C  +G  + A    D+++
Sbjct: 547 NVFGWCSFLGACKIHGDMERAKFAADKLM 575



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 133/434 (30%), Positives = 208/434 (47%), Gaps = 14/434 (3%)

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
           S+  T   ++   A     + G Q+H  ++  G   N ++ +  +++Y+KCG+LD   +L
Sbjct: 73  SDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKL 132

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
            +     N VSW S+I GFA     +EALS F +M         F   SVL    S   +
Sbjct: 133 FDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAI 192

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
                VH L+VK GF    FV + L DMY+K G L  A   F  M  KD + WTS+I G 
Sbjct: 193 QFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGF 252

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
             +G +++AL  +  M    +  D  V+ S LSAC+ L    FG+ +HA  LK G     
Sbjct: 253 VKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYET 312

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTR--DVITWTALIMGCAQNGKGKEALQFYDQML 530
            + N+L  +Y+K G +  A+ VF  +H+    +++ TA+I G  +  + ++AL  +  + 
Sbjct: 313 FIGNALTDMYSKSGDMVSASNVF-QIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLR 371

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKL 590
            RG +P+  TF  L+ AC++    E+       + K +  K  P   + ++D+ G+ G  
Sbjct: 372 RRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVK-FNFKRDPFVSSTLVDMYGKCGLF 430

Query: 591 IEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAA---NNLFE--LEPMNAMPYVQ 645
             +  L D+ +  PD   W  L+     HG   LG  A    N +    L+P NA+ +V 
Sbjct: 431 DHSIQLFDE-IENPDEIAWNTLVGVFSQHG---LGRNAIETFNGMIHRGLKP-NAVTFVN 485

Query: 646 LSNMYSTAGKWEDA 659
           L    S AG  ED 
Sbjct: 486 LLKGCSHAGMVEDG 499



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 191/382 (50%), Gaps = 8/382 (2%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  + +   Y+  G L +A K F E P K+   W+S+I G+   G   +A   + +M  +
Sbjct: 212 FVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTD 271

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
                Q+ L + L  CS       G+  H   +K  F+   F+   L DMY+K   +  A
Sbjct: 272 DVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSA 331

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F++  D  + V+ T +I GY +     KA+  F D+R  G+E N+FTF S++ ACA 
Sbjct: 332 SNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACAN 391

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
            +  + G+Q+HG ++   F+ + +V S L+DMY KCG  D + +L +  E  +E++WN++
Sbjct: 392 QAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTL 451

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTG 366
           +  F++ G  + A+  F  M  R +K +  T+ ++L  C  + +  +      S+    G
Sbjct: 452 VGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYG 511

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALKYF 425
               +   + +ID+  + G L  A    N M  + +V  W S +  C  HG  E A K+ 
Sbjct: 512 VVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGDMERA-KFA 570

Query: 426 SDMRISGICPD----HVVVSSI 443
           +D ++  + P+    HV++S+I
Sbjct: 571 AD-KLMKLEPENSGAHVLLSNI 591



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 182/385 (47%), Gaps = 48/385 (12%)

Query: 320 ALSLFKKMHARDIKIDDF-TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           + S  K +     K+ D  T   ++  +A   +LN  K +H+++++ G     F++N  +
Sbjct: 58  SFSFLKNLFGSGHKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFL 117

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
           ++Y+K G LD    +F+ M  ++++SWTS+ITG A++  ++EAL  F  MRI G      
Sbjct: 118 NLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQF 177

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
            +SS+L AC  L  ++FG QVH + +K G    L V ++L  +Y+KCG ++DA + F+ M
Sbjct: 178 ALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEM 237

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENAR 558
             +D + WT++I G  +NG  K+AL  Y +M+      D       L ACS    A  A 
Sbjct: 238 PCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACS----ALKAS 293

Query: 559 WYFESMDKVYGIKPGPDHYA----CMIDLLGRSGKLIEAK----------------ALLD 598
            + +S+     +K G ++       + D+  +SG ++ A                 A++D
Sbjct: 294 SFGKSLHATI-LKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIID 352

Query: 599 QMVG-------------------EPDATVWKALLSACRVHGDLELGERAANNLFELEPMN 639
             V                    EP+   + +L+ AC     LE G +    + +     
Sbjct: 353 GYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFN-FK 411

Query: 640 AMPYVQ--LSNMYSTAGKWEDAARV 662
             P+V   L +MY   G ++ + ++
Sbjct: 412 RDPFVSSTLVDMYGKCGLFDHSIQL 436


>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 298/762 (39%), Positives = 423/762 (55%), Gaps = 108/762 (14%)

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF------------------------ 191
           H + I + F    +++  L+D+Y K   +  A +LF                        
Sbjct: 38  HAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGNS 97

Query: 192 ----KMF---PDG-KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
               ++F   P G ++ V +  MITGYS N  GF AIE FRD+   G   + FTF S+L 
Sbjct: 98  NLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLG 157

Query: 244 ACA-AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC------------------- 283
           A A  V       Q+H  ++ SG      V +AL+ ++ KC                   
Sbjct: 158 ALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLF 217

Query: 284 ---------------------GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
                                G+LD+AR+ L+       V+WN+MI G+   GF  EAL 
Sbjct: 218 DEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALE 277

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT----GFEGYKFVNNALI 378
           +F+KM+   I+ D+FTY SVL+  A+     + K VH+ I++T      +    VNNAL 
Sbjct: 278 MFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALA 337

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISW-------------------------------TS 407
            +Y K G +D A  VFN M  KD++SW                               T 
Sbjct: 338 TLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTV 397

Query: 408 LITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG 467
           +I+G A +G  EE+LK F+ M+  G  P     +  + ACA L  L  G+Q+HA  ++ G
Sbjct: 398 MISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLG 457

Query: 468 GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYD 527
             SSLS  N+L+ +YAKCG +  A+ +F +M   D ++W A+I    Q+G G +AL+ ++
Sbjct: 458 FDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFE 517

Query: 528 QMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRS 587
            ML     PD ITF+ +L  CSHAGL E    YF+SM  +YGI PG DHYA MIDLL R+
Sbjct: 518 LMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRA 577

Query: 588 GKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLS 647
           GK  EAK +++ M  EP   +W+ALL+ CR+HG+++LG +AA  LFEL P +   YV LS
Sbjct: 578 GKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLS 637

Query: 648 NMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKID 707
           NMY+T G+W+D A+VRKLM+ +G++KEPGCSW+E  ++VH+F+ +D  HP    +Y+ ++
Sbjct: 638 NMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLE 697

Query: 708 EIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLR 767
           E+ L +++ GY+PD  F LH++E E KE  L+ HSEKLAV FGLL LP GA +R+FKNLR
Sbjct: 698 ELGLKMRKLGYIPDTKFVLHDMESEQKEYVLSTHSEKLAVGFGLLKLPLGATVRVFKNLR 757

Query: 768 VCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +CGDCH A K++S V  R I++RD  RFHHFK G CSCG+YW
Sbjct: 758 ICGDCHNAFKFMSKVVEREIVVRDGKRFHHFKNGECSCGNYW 799



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 152/595 (25%), Positives = 265/595 (44%), Gaps = 88/595 (14%)

Query: 20  IGPARYTHNVGNSVKPAS-DLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYA 78
           I    + H + +  KP    LNR +  +  S ++  A  LF+++   D     T+IAA++
Sbjct: 33  IARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHS 92

Query: 79  NSGRLREAKKLFNETPF--KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
           ++G    A+++F  TP   ++   ++++I GYS+      A ELF  +   G+RP  +T 
Sbjct: 93  SAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTF 152

Query: 137 DNVLRLCSLKGLLQRG-EQFHGYAIKTCFDLNAFVVTGLVDMYAKCK---------CIFE 186
            +VL   +L    ++  +Q H   +K+       V+  L+ ++ KC           +  
Sbjct: 153 TSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAA 212

Query: 187 AEYLF---------------------------KMFPDGKNH---VAWTTMITGYSQNGYG 216
           A  LF                           + F DG      VAW  MI+GY  +G+ 
Sbjct: 213 ARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFF 272

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS----GFEANVYV 272
            +A+E FR M + G++ ++FT+ S+L+ACA       G QVH  IL +      + ++ V
Sbjct: 273 LEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSV 332

Query: 273 QSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS-------------------------- 306
            +AL  +Y KCG +D AR++     + + VSWN+                          
Sbjct: 333 NNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNL 392

Query: 307 -----MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
                MI G A+ GF +E+L LF +M +   +  D+ +   +   A    L + + +H+ 
Sbjct: 393 LTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQ 452

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           +V+ GF+      NALI MYAK G ++ A  +F  M   D +SW ++I     HG   +A
Sbjct: 453 LVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQA 512

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS-----GGCSSLSVDN 476
           L+ F  M    I PD +   ++LS C+   ++E G +    + KS     G C       
Sbjct: 513 LELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHR----YFKSMSGLYGICPGEDHYA 568

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRD-VITWTALIMGCAQNGKGKEALQFYDQML 530
            ++ +  + G  ++A  + ++M        W AL+ GC  +G     +Q  +++ 
Sbjct: 569 RMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLF 623



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 135/483 (27%), Positives = 230/483 (47%), Gaps = 78/483 (16%)

Query: 55  AGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLD 114
           A +LF++M++RD  +W TMIA Y  +G L  A++  +    K    W+++I GY ++G  
Sbjct: 213 ARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFF 272

Query: 115 IEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT----CFDLNAFV 170
           +EA E+F +M L G +  ++T  +VL  C+  G    G+Q H Y ++T      D +  V
Sbjct: 273 LEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSV 332

Query: 171 VTGLVDMYAKCKCIFEAEYLFKMFP------------------------------DGKNH 200
              L  +Y KC  + EA  +F   P                                +N 
Sbjct: 333 NNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNL 392

Query: 201 VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
           + WT MI+G +QNG+G ++++ F  M+ EG E   + F   + ACA ++A   G Q+H  
Sbjct: 393 LTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQ 452

Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEA 320
           ++  GF++++   +ALI MYAKCG +++A  L       + VSWN+MI    + G   +A
Sbjct: 453 LVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQA 512

Query: 321 LSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL--- 377
           L LF+ M   DI  D  T+ +VL+  +           H+ +V+ G   +K ++      
Sbjct: 513 LELFELMLKEDILPDRITFLTVLSTCS-----------HAGLVEEGHRYFKSMSGLYGIC 561

Query: 378 --IDMYAKQGNLDCAFMVFNLMQDKDVIS----------WTSLITGCAYHGSYEEALKYF 425
              D YA+  +L C    F+  + KD+I           W +L+ GC  HG+ +  ++  
Sbjct: 562 PGEDHYARMIDLLCRAGKFS--EAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQ-- 617

Query: 426 SDMRISGICPDH----VVVSSILSA------CAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           +  R+  + P H    V++S++ +        A++  L   + V     K  GCS + V+
Sbjct: 618 AAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVK----KEPGCSWIEVE 673

Query: 476 NSL 478
           N +
Sbjct: 674 NKV 676


>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Glycine max]
          Length = 986

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 303/793 (38%), Positives = 445/793 (56%), Gaps = 55/793 (6%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFK--NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG 128
             +I  Y  S     A  L    P    + F W+ LI    + G   + F L+ QM+  G
Sbjct: 195 TNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLG 254

Query: 129 YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
           + P  YT   V + C+    L  G   H    ++ F  N FV   +V MY KC  +  A 
Sbjct: 255 WTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAH 314

Query: 189 YLFKMFPDG--KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES-NQFTFPSILTAC 245
            +F        ++ V+W ++++ Y        A+  F  M    + S +  +  +IL AC
Sbjct: 315 NMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPAC 374

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A+++A   G QVHG  + SG   +V+V +A++DMYAKCG ++ A ++ +  +  + VSWN
Sbjct: 375 ASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWN 434

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN------ID-------- 351
           +M+ G+++ G  + ALSLF++M   +I++D  T+ +V+  +A        +D        
Sbjct: 435 AMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDC 494

Query: 352 ---------------------LNNAKSVHSLIVK---------TGFEGYKFVNNALIDMY 381
                                L + K  H   +K          G +  K +N  LIDMY
Sbjct: 495 GSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVIN-GLIDMY 553

Query: 382 AKQGNLDCAFMVFNLM--QDKDVISWTSLITGCAYHGSYEEALKYFSDM--RISGICPDH 437
           AK  + + A  +F+ +  +D+DV++WT +I G A HG    AL+ FS M      I P+ 
Sbjct: 554 AKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPND 613

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKS-GGCSSLSVDNSLVLVYAKCGCINDANRVFD 496
             +S  L ACA L  L FG+QVHA  L++  G   L V N L+ +Y+K G ++ A  VFD
Sbjct: 614 FTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFD 673

Query: 497 SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAEN 556
           +M  R+ ++WT+L+ G   +G+G++AL+ +D+M      PD ITF+ +L+ACSH+G+ ++
Sbjct: 674 NMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDH 733

Query: 557 ARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSAC 616
              +F  M K +G+ PGP+HYACM+DL GR+G+L EA  L+++M  EP   VW ALLSAC
Sbjct: 734 GINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSAC 793

Query: 617 RVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPG 676
           R+H ++ELGE AAN L ELE  N   Y  LSN+Y+ A +W+D AR+R  MK  GI+K PG
Sbjct: 794 RLHSNVELGEFAANRLLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPG 853

Query: 677 CSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEI 736
           CSW++    V  F   DR HP    IY  + +++  IK  GYVP  +FALH+V++E K  
Sbjct: 854 CSWIQGRKGVATFYVGDRSHPQSQQIYETLADLIQRIKAIGYVPQTSFALHDVDDEEKGD 913

Query: 737 GLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFH 796
            L  HSEKLA+A+G+LTL   APIRI KNLR+CGDCH+A+ YIS +    IILRDS+RFH
Sbjct: 914 LLFEHSEKLALAYGILTLHPRAPIRITKNLRICGDCHSAITYISKIIEHEIILRDSSRFH 973

Query: 797 HFKAGNCSCGDYW 809
           HFK G+CSC  YW
Sbjct: 974 HFKNGSCSCKGYW 986



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 131/402 (32%), Positives = 210/402 (52%), Gaps = 29/402 (7%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF-- 98
           A+VD ++  G+++EA ++F++M  +D  +WN M+  Y+ +GRL  A  LF     +N   
Sbjct: 404 AVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIEL 463

Query: 99  --FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
              TW+++I GY+  G   EA ++F QM   G RP+  TL ++L  C   G L  G++ H
Sbjct: 464 DVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETH 523

Query: 157 GYAIKTCFDLNAF--------VVTGLVDMYAKCKCIFEAEYLF-KMFPDGKNHVAWTTMI 207
            YAIK   +L+          V+ GL+DMYAKC+    A  +F  + P  ++ V WT MI
Sbjct: 524 CYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMI 583

Query: 208 TGYSQNGYGFKAIECFRDM--RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
            GY+Q+G    A++ F  M    + ++ N FT    L ACA ++A  FG QVH  +L + 
Sbjct: 584 GGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNF 643

Query: 266 F-EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLF 324
           +    ++V + LIDMY+K GD+D+A+ + +     N VSW S++ G+   G  ++AL +F
Sbjct: 644 YGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVF 703

Query: 325 KKMHARDIKIDDFTYPSVL-NCFAS-----NIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
            +M    +  D  T+  VL  C  S      I+  N  S     V  G E Y      ++
Sbjct: 704 DEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMS-KDFGVDPGPEHYA----CMV 758

Query: 379 DMYAKQGNLDCAFMVFNLM-QDKDVISWTSLITGCAYHGSYE 419
           D++ + G L  A  + N M  +   + W +L++ C  H + E
Sbjct: 759 DLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVE 800


>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 283/747 (37%), Positives = 417/747 (55%), Gaps = 73/747 (9%)

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
           Q+T+ N L   S    L +  Q H + +KT    +  + T L+  YA   C  +A  +  
Sbjct: 15  QHTIFNCLN--STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLD 72

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
           + P+  N  +++T+I  +S+      A+  F  M   G+  +    PS + ACA +SA  
Sbjct: 73  LVPE-PNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALK 131

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE------------------ 294
              QVHG    SGF+++ +VQS+L+ MY KC  +  A R+ +                  
Sbjct: 132 PARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYA 191

Query: 295 -----------YSEI------DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
                      +SE+       N +SWN MI GF   G + EA+ +F  MH R  + D  
Sbjct: 192 RQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGT 251

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK-------------- 383
           T  SVL       DL     +H  ++K G    K V++ALIDMY K              
Sbjct: 252 TISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQM 311

Query: 384 -----------------QGNLDCAFMVFNLMQDK----DVISWTSLITGCAYHGSYEEAL 422
                             G ++ +  +F  ++D+    +V+SWTS+I  C+ +G   EAL
Sbjct: 312 DHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEAL 371

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
           + F +M+I+G+ P+ V +  +L AC  +  L  G+  H   L+ G  + + V ++L+ +Y
Sbjct: 372 ELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMY 431

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
           AKCG I  +   FD + T++++ W A+I G A +GK KEA++ +D M   G KPD I+F 
Sbjct: 432 AKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFT 491

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
            +L ACS +GL E   +YF SM   YGI+   +HYACM+ LL R+GKL +A A++ +M  
Sbjct: 492 CVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPV 551

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
            PDA VW ALLS+CRVH ++ LGE AA  LFELEP N   Y+ LSN+Y++ G W +  RV
Sbjct: 552 NPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRV 611

Query: 663 RKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDM 722
           R +MK++G+RK PGCSW+E  ++VH+ ++ D+ HP  T I  K+D++ + +K+ GY P++
Sbjct: 612 RDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGYFPEI 671

Query: 723 NFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAV 782
           NF L +VEE+ KE  L  HSEKLAV FGLL  P G P+++ KNLR+CGDCH  +K+IS+ 
Sbjct: 672 NFVLQDVEEQDKEQILCGHSEKLAVVFGLLNTPPGYPLQVIKNLRICGDCHVVIKFISSF 731

Query: 783 YLRHIILRDSNRFHHFKAGNCSCGDYW 809
             R I +RD+NRFHHFK G CSCGDYW
Sbjct: 732 ERREIFVRDTNRFHHFKEGACSCGDYW 758



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 134/439 (30%), Positives = 213/439 (48%), Gaps = 43/439 (9%)

Query: 20  IGPARYTHNVGNSVKPASD--LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAA 76
           + PAR  H + +     SD  +  +LV  +    +I +A ++F++M + D  +W+ ++AA
Sbjct: 130 LKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAA 189

Query: 77  YANSGRLREAKKLFNET----PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           YA  G + EAK+LF+E        N  +W+ +I G+++ GL  EA  +F  M L G+ P 
Sbjct: 190 YARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPD 249

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE---- 188
             T+ +VL        L  G   HGY IK     +  V + L+DMY KC C  E      
Sbjct: 250 GTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFD 309

Query: 189 ------------YLFKMFPDGK------------------NHVAWTTMITGYSQNGYGFK 218
                       ++F +  +G+                  N V+WT+MI   SQNG   +
Sbjct: 310 QMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIE 369

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID 278
           A+E FR+M++ GV+ N  T P +L AC  ++A   G   H   L  G   +VYV SALID
Sbjct: 370 ALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALID 429

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
           MYAKCG + ++R   +     N V WN++I G+A  G  KEA+ +F  M     K D  +
Sbjct: 430 MYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIIS 489

Query: 339 YPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNL 396
           +  VL+ C  S +    +   +S+  K G E        ++ + ++ G L+ A+ M+  +
Sbjct: 490 FTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRM 549

Query: 397 MQDKDVISWTSLITGCAYH 415
             + D   W +L++ C  H
Sbjct: 550 PVNPDACVWGALLSSCRVH 568



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 141/519 (27%), Positives = 230/519 (44%), Gaps = 71/519 (13%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D      +++ YAN+    +A  + +  P  N F++S+LIY +S +     A   F QM 
Sbjct: 47  DTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQML 106

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK--- 182
             G  P    L + ++ C+    L+   Q HG A  + FD ++FV + LV MY KC    
Sbjct: 107 TRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIR 166

Query: 183 ----------------------------CIFEAEYLFKMFPDG---KNHVAWTTMITGYS 211
                                       C+ EA+ LF    D     N ++W  MI G++
Sbjct: 167 DAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFN 226

Query: 212 QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVY 271
            +G   +A+  F DM + G E +  T  S+L A   +     G  +HG ++  G  ++  
Sbjct: 227 HSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKC 286

Query: 272 VQSALIDMYAKC-------------------------------GDLDSARRLLEYSEID- 299
           V SALIDMY KC                               G ++S+ RL    +   
Sbjct: 287 VSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQG 346

Query: 300 ---NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              N VSW SMI   ++ G   EAL LF++M    +K +  T P +L    +   L + K
Sbjct: 347 MELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGK 406

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
           + H   ++ G     +V +ALIDMYAK G +  + + F+ +  K+++ W ++I G A HG
Sbjct: 407 AAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHG 466

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ-QVHAVFLKSGGCSSLSVD 475
             +EA++ F  M+ SG  PD +  + +LSAC++  + E G    +++  K G  + +   
Sbjct: 467 KAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHY 526

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
             +V + ++ G +  A  +   M    D   W AL+  C
Sbjct: 527 ACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSC 565



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 130/247 (52%), Gaps = 2/247 (0%)

Query: 327 MHARDIKIDDFTYPSVLNCFASNI-DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           + A+ + + D    ++ NC  S    L+  +  H+ I+KTG      +   L+  YA   
Sbjct: 3   LSAQALALLDSVQHTIFNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNM 62

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
               A +V +L+ + +V S+++LI   +    +  AL  FS M   G+ PD+ V+ S + 
Sbjct: 63  CFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVK 122

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
           ACA L+ L+  +QVH +   SG  S   V +SLV +Y KC  I DA+RVFD M   DV++
Sbjct: 123 ACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVS 182

Query: 506 WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMD 565
           W+AL+   A+ G   EA + + +M   G +P+ I++ G++   +H+GL   A   F  M 
Sbjct: 183 WSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDM- 241

Query: 566 KVYGIKP 572
            + G +P
Sbjct: 242 HLRGFEP 248


>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
            [Vitis vinifera]
          Length = 1005

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 282/740 (38%), Positives = 428/740 (57%), Gaps = 2/740 (0%)

Query: 71   NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
            N +I  Y+  G +  A+++F++   ++  +W +++ GY++ G  +E  ELF +M+L   R
Sbjct: 267  NGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVR 326

Query: 131  PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
             ++ +  +     +    L++G++ HG A++   D +  V T L+ MYAKC    +A+ L
Sbjct: 327  INKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQL 386

Query: 191  FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
            F     G++ VAW+ +I    Q GY  +A+  F++M+ + ++ N+ T  SIL ACA +S 
Sbjct: 387  FWGL-QGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSL 445

Query: 251  RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
               G  +H   + +  ++++   +AL+ MYAKCG   +A          + V+WNS+I G
Sbjct: 446  LKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLING 505

Query: 311  FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
            +A+ G    A+ +F K+    I  D  T   V+   A   DL+    +H LIVK GFE  
Sbjct: 506  YAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESD 565

Query: 371  KFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
              V NALIDMYAK G+L  A  +FN     KD ++W  +I     +G  +EA+  F  MR
Sbjct: 566  CHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMR 625

Query: 430  ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
            +    P+ V   S+L A A L     G   HA  ++ G  S+  V NSL+ +YAKCG ++
Sbjct: 626  LENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLD 685

Query: 490  DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
             + ++F+ M  +D ++W A++ G A +G G  A+  +  M     + D ++FV +L AC 
Sbjct: 686  YSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACR 745

Query: 550  HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
            HAGL E  R  F SM   Y IKP  +HYACM+DLLGR+G   E    +  M  EPDA VW
Sbjct: 746  HAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVW 805

Query: 610  KALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
             ALL +CR+H +++LGE A ++L +LEP N   +V LS++Y+ +G+W DA + R  M   
Sbjct: 806  GALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDL 865

Query: 670  GIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNV 729
            G++K PGCSWVE  ++VH F   D+ HP    ++   + ++  +++ GYVPD +  L NV
Sbjct: 866  GLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNV 925

Query: 730  EEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIIL 789
            EEE KE+ L  HSE+LA+ F LL  P G+ I+I KNLRVC DCHT  K+IS +  R II+
Sbjct: 926  EEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIV 985

Query: 790  RDSNRFHHFKAGNCSCGDYW 809
            RD+ RFHHF+ G CSC DYW
Sbjct: 986  RDATRFHHFEDGICSCNDYW 1005



 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 181/581 (31%), Positives = 296/581 (50%), Gaps = 17/581 (2%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS 109
           GEID  G       +RD F    ++  Y+  G L+ A+++F++ P ++   W+++I G S
Sbjct: 153 GEIDRRGL------ERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLS 206

Query: 110 NYGLDIEAFELFWQMQLEGYRPSQYTLDNVLR-LCSLKGLLQRGEQFHGYAIKTCFDLNA 168
                 EA + F  MQL G  PS  +L N+   +C L   ++     HGY  +   D ++
Sbjct: 207 QSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSN-IELCRSIHGYVFRR--DFSS 263

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
            V  GL+D+Y+KC  +  A  +F    D ++ V+W TM+ GY+ NG   + +E F  M++
Sbjct: 264 AVSNGLIDLYSKCGDVDVARRVFDQMVD-QDDVSWGTMMAGYAHNGCFVEVLELFDKMKL 322

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
             V  N+ +  S   A A     + G ++HGC L    ++++ V + L+ MYAKCG+ + 
Sbjct: 323 GNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEK 382

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
           A++L    +  + V+W+++I    + G+ +EALSLF++M  + +K +  T  S+L   A 
Sbjct: 383 AKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACAD 442

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
              L   KS+H   VK   +       AL+ MYAK G    A   FN M  +D+++W SL
Sbjct: 443 LSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSL 502

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
           I G A  G    A+  F  +R+S I PD   +  ++ ACA L  L+ G  +H + +K G 
Sbjct: 503 INGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGF 562

Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMGCAQNGKGKEALQFYD 527
            S   V N+L+ +YAKCG +  A  +F+    T+D +TW  +I    QNG  KEA+  + 
Sbjct: 563 ESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFH 622

Query: 528 QMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRS 587
           QM      P+ +TFV +L A ++         +   + ++ G          +ID+  + 
Sbjct: 623 QMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQM-GFLSNTLVGNSLIDMYAKC 681

Query: 588 GKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
           G+L  ++ L ++M    D   W A+LS   VHG    G+RA
Sbjct: 682 GQLDYSEKLFNEM-DHKDTVSWNAMLSGYAVHGH---GDRA 718



 Score =  278 bits (712), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 164/530 (30%), Positives = 273/530 (51%), Gaps = 4/530 (0%)

Query: 86  AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL 145
           A+ +F+ TP  +   W+S+I  Y+      EA E+++ M  +G  P +YT   VL+ C+ 
Sbjct: 82  ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTG 141

Query: 146 KGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTT 205
              LQ G  FHG   +   + + F+  GLVDMY+K   +  A  +F   P  ++ VAW  
Sbjct: 142 ALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPK-RDVVAWNA 200

Query: 206 MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
           MI G SQ+    +A++ FR M++ GVE +  +  ++      +S  +    +HG +    
Sbjct: 201 MIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRD 260

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
           F + V   + LID+Y+KCGD+D ARR+ +     ++VSW +M+ G+A  G   E L LF 
Sbjct: 261 FSSAV--SNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFD 318

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           KM   +++I+  +  S     A  IDL   K +H   ++   +    V   L+ MYAK G
Sbjct: 319 KMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCG 378

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
             + A  +F  +Q +D+++W+++I      G  EEAL  F +M+   + P+ V + SIL 
Sbjct: 379 ETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILP 438

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
           ACA+L++L+ G+ +H   +K+   S LS   +LV +YAKCG    A   F+ M +RD++T
Sbjct: 439 ACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVT 498

Query: 506 WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMD 565
           W +LI G AQ G    A+  + ++      PD  T VG++ AC+     +        + 
Sbjct: 499 WNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIV 558

Query: 566 KVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
           K+ G +        +ID+  + G L  A+ L ++     D   W  +++A
Sbjct: 559 KL-GFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAA 607



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 159/522 (30%), Positives = 257/522 (49%), Gaps = 18/522 (3%)

Query: 44  VDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSS 103
           +D     EI   G   ++  D D      ++  YA  G   +AK+LF     ++   WS+
Sbjct: 343 IDLEKGKEIH--GCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSA 400

Query: 104 LIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC 163
           +I      G   EA  LF +MQ +  +P++ TL ++L  C+   LL+ G+  H + +K  
Sbjct: 401 IIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKAD 460

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
            D +    T LV MYAKC     A   F      ++ V W ++I GY+Q G  + AI+ F
Sbjct: 461 MDSDLSTGTALVSMYAKCGFFTAALTTFNRM-SSRDIVTWNSLINGYAQIGDPYNAIDMF 519

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
             +R+  +  +  T   ++ ACA ++  D G  +HG I+  GFE++ +V++ALIDMYAKC
Sbjct: 520 YKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKC 579

Query: 284 GDLDSARRLLEYSEI-DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
           G L SA  L   ++   +EV+WN +I  + + G  KEA+S F +M   +   +  T+ SV
Sbjct: 580 GSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSV 639

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV 402
           L   A         + H+ I++ GF     V N+LIDMYAK G LD +  +FN M  KD 
Sbjct: 640 LPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDT 699

Query: 403 ISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV-HA 461
           +SW ++++G A HG  + A+  FS M+ S +  D V   S+LSAC    ++E G+++ H+
Sbjct: 700 VSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHS 759

Query: 462 VFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGK-- 518
           +  K      L     +V +  + G  ++       M    D   W AL+  C  +    
Sbjct: 760 MSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVK 819

Query: 519 -GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW 559
            G+ AL    ++  R   P +   +  ++       A++ RW
Sbjct: 820 LGEVALDHLVKLEPR--NPAHFVVLSSIY-------AQSGRW 852



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 166/317 (52%), Gaps = 6/317 (1%)

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
           +N   +P +L++C  ++      Q+H  I+ SGF+ +  + + LI++Y+     D AR +
Sbjct: 30  TNYLHYPRLLSSCKHLNPL---LQIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSV 85

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
            + +   + + WNSMI  + R   + EAL ++  M  + ++ D +T+  VL      ++L
Sbjct: 86  FDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNL 145

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
                 H  I + G E   F+   L+DMY+K G+L  A  VF+ M  +DV++W ++I G 
Sbjct: 146 QEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGL 205

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
           +      EA+ +F  M++ G+ P  V + ++     +L+ +E  + +H    +    S++
Sbjct: 206 SQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAV 265

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
           S  N L+ +Y+KCG ++ A RVFD M  +D ++W  ++ G A NG   E L+ +D+M   
Sbjct: 266 S--NGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLG 323

Query: 533 GTKPDYITFVGLLFACS 549
             + + ++ V    A +
Sbjct: 324 NVRINKVSAVSAFLAAA 340


>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 785

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 293/743 (39%), Positives = 436/743 (58%), Gaps = 73/743 (9%)

Query: 134 YTLDNVLRLCSLKGLLQRGEQ-FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
           + ++N++   +  G +    + F    +K+ F  N  +++G    YAK   + EA  +F+
Sbjct: 49  FLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWN-IILSG----YAKGGRLEEAHRVFE 103

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
             P+  + V+WT MI GY+Q G    AI  FR+M  + V   QFT  ++L +CAAV    
Sbjct: 104 EMPE-PDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLG 162

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR---------------------- 290
            G +VH  ++  G  + + V ++L++MYAK GD  +A+                      
Sbjct: 163 IGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHM 222

Query: 291 --RLLEYSEIDNE-------VSWNSMIVGFARQGFHKEALSLFKKM-HARDIKIDDFTYP 340
              L++ +++  E       VSWN+MI G+ + GF +EAL +F KM      K D FT  
Sbjct: 223 QSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLA 282

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG--------------- 385
           S L+  A+  +L   K +H+ I++T F+ +  V NALI MY+K G               
Sbjct: 283 SALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMIS 342

Query: 386 NLDC------------------AFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
           NLD                   A  +F+ ++ +DV++WT++I G   +G  ++A++ F  
Sbjct: 343 NLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRS 402

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           M   G  P++  ++++LS  + L  L+ G+Q+HA   +SG  SS+SV N+L+ +YAK G 
Sbjct: 403 MIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGS 462

Query: 488 INDANRVFDSMH-TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
           INDA  VF+ +H  RD ITWT++I+  AQ+G G+EAL  +++ML  G KPD+IT+VG+L 
Sbjct: 463 INDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLS 522

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           AC+H GL E  R Y+  M   + I P P HYACMIDL GR+G L EA A ++ M  EPD 
Sbjct: 523 ACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDV 582

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
             W +LL++C+VH ++EL E AA  L  +EP N+  Y  L+N+YS  G+WE+AA +RK M
Sbjct: 583 IAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSACGQWENAANIRKSM 642

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFAL 726
           K +G++K+ G SWV+  ++VHIF  +D  HP R  IY  + +I   IK+ G+VPD    L
Sbjct: 643 KDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEMMAKIWKEIKKMGFVPDTESVL 702

Query: 727 HNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRH 786
           H++EEE KE  L++HSEKLA+AFGL+  P+   +RI KNLRVC DCH+A+K+IS +  R 
Sbjct: 703 HDLEEELKEQILSHHSEKLAIAFGLICTPENTTLRIMKNLRVCNDCHSAIKFISKLVGRE 762

Query: 787 IILRDSNRFHHFKAGNCSCGDYW 809
           II+RD+ RFHHFK G CSC DYW
Sbjct: 763 IIVRDATRFHHFKNGLCSCRDYW 785



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 153/543 (28%), Positives = 276/543 (50%), Gaps = 69/543 (12%)

Query: 39  LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF 98
           +N  +  ++ +G I +A ++F++M  +  F+WN +++ YA  GRL EA ++F E P  + 
Sbjct: 51  MNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDS 110

Query: 99  FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
            +W+++I GY+  G    A  +F +M  +   P+Q+TL NVL  C+    L  G + H +
Sbjct: 111 VSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSF 170

Query: 159 AIKTCFDLNAFVVTGLVDMYAK------CKCIFE-------------------------A 187
            +K        V   L++MYAK       K +F+                         A
Sbjct: 171 VVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLA 230

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE-GVESNQFTFPSILTACA 246
           +  F+   + ++ V+W  MI+GY+Q+G+  +A++ F  M ++   + ++FT  S L+ACA
Sbjct: 231 QVQFEQMIE-RDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACA 289

Query: 247 AVSARDFGAQVHGCILSSGFEA---------------------------------NVYVQ 273
            +     G Q+H  I+ + F+                                  +V   
Sbjct: 290 NLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAF 349

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
           +AL+D Y K GD++ ARR+ +   + + V+W +MIVG+ + GF+++A+ LF+ M     K
Sbjct: 350 TALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPK 409

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
            +++T  ++L+  +S   L++ + +H+   ++G      V+NALI MYAK G+++ A  V
Sbjct: 410 PNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWV 469

Query: 394 FNLMQ-DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV 452
           FNL+   +D I+WTS+I   A HG  EEAL  F  M  +GI PDH+    +LSAC  + +
Sbjct: 470 FNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGL 529

Query: 453 LEFGQQVHAVFLKSGG-CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALI 510
           +E G+  + +   +     + S    ++ ++ + G + +A+   ++M    DVI W +L+
Sbjct: 530 VEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLL 589

Query: 511 MGC 513
             C
Sbjct: 590 ASC 592



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 214/470 (45%), Gaps = 99/470 (21%)

Query: 33  VKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE 92
           +K  S  N  +     SG +D A   FE+M +RD  +WN MI+ Y               
Sbjct: 208 LKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGY--------------- 252

Query: 93  TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQR 151
                           + +G D EA ++F +M ++   +P ++TL + L  C+    L+ 
Sbjct: 253 ----------------NQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKL 296

Query: 152 GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL-------------FKMFPDG- 197
           G+Q H + I+T FD    V   L+ MY+K   +  A+ +             F    DG 
Sbjct: 297 GKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGY 356

Query: 198 ------------------KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFP 239
                             ++ VAWT MI GY QNG+   A+E FR M  EG + N +T  
Sbjct: 357 VKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLA 416

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR---RLLEYS 296
           ++L+  +++++ D G Q+H     SG  ++V V +ALI MYAK G ++ AR    L+ + 
Sbjct: 417 TMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWK 476

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              + ++W SMI+  A+ G  +EAL+LF++M    IK D  TY  VL+            
Sbjct: 477 R--DTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSA----------- 523

Query: 357 SVHSLIVKTGFEGYKFVNNA------------LIDMYAKQGNLDCAF-MVFNLMQDKDVI 403
             H  +V+ G   Y  + NA            +ID++ + G L  A   + N+  + DVI
Sbjct: 524 CTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVI 583

Query: 404 SWTSLITGCAYHGSYEEALKYFSDMRISGICPD----HVVVSSILSACAE 449
           +W SL+  C  H + E  L   +  R+  I P+    +  ++++ SAC +
Sbjct: 584 AWGSLLASCKVHKNVE--LAEVAAERLLLIEPENSGAYSALANVYSACGQ 631



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 213/477 (44%), Gaps = 101/477 (21%)

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           G  +H  I+ +G    V++ + L++ YAK G +  A R+ +   + +  SWN ++ G+A+
Sbjct: 32  GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAK 91

Query: 314 QGFHKE-------------------------------ALSLFKKMHARDIKIDDFTYPSV 342
            G  +E                               A+ +F++M + D+    FT  +V
Sbjct: 92  GGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNV 151

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ---- 398
           L   A+   L   + VHS +VK G   Y  V N+L++MYAK G+   A +VF+ M+    
Sbjct: 152 LASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKST 211

Query: 399 ---------------------------DKDVISWTSLITGCAYHGSYEEALKYFSDMRI- 430
                                      ++DV+SW ++I+G   HG   EAL  FS M + 
Sbjct: 212 SSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMD 271

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHA-------------------VFLKSGGC-- 469
           S   PD   ++S LSACA L  L+ G+Q+HA                   ++ KSGG   
Sbjct: 272 SSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEI 331

Query: 470 ----------SSLSVDNSLVLV--YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
                     S+L V     L+  Y K G IN A R+FDS+  RDV+ WTA+I+G  QNG
Sbjct: 332 AQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNG 391

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY 577
             ++A++ +  M+  G KP+  T   +L   S     ++ R    S  +  G        
Sbjct: 392 FNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATR-SGNASSVSVS 450

Query: 578 ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFE 634
             +I +  +SG + +A+ + + +  + D   W +++ A   HG   LGE A   LFE
Sbjct: 451 NALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHG---LGEEAL-TLFE 503



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 144/294 (48%), Gaps = 5/294 (1%)

Query: 20  IGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEK--MSDRDGFTWNTMIAA 76
           +G   + H +         +  AL+  +S SG ++ A ++ E+  +S+ D   +  ++  
Sbjct: 296 LGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDG 355

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
           Y   G +  A+++F+    ++   W+++I GY   G + +A ELF  M  EG +P+ YTL
Sbjct: 356 YVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTL 415

Query: 137 DNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD 196
             +L + S    L  G Q H  A ++    +  V   L+ MYAK   I +A ++F +   
Sbjct: 416 ATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHW 475

Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
            ++ + WT+MI   +Q+G G +A+  F  M   G++ +  T+  +L+AC  V   + G  
Sbjct: 476 KRDTITWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRS 535

Query: 257 VHGCILSSGFEANVYVQSA-LIDMYAKCGDLDSARRLLEYSEIDNEV-SWNSMI 308
            +  + ++          A +ID++ + G L  A   +E   I+ +V +W S++
Sbjct: 536 YYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLL 589



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 103/222 (46%), Gaps = 41/222 (18%)

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
           G+ +HA  +K+G    + + N+L+  YAK G I DA+RVFD M  + V +W  ++ G A+
Sbjct: 32  GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAK 91

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESM--DKV------ 567
            G+ +EA + +++M     +PD +++  ++   +  G  ENA   F  M  D V      
Sbjct: 92  GGRLEEAHRVFEEM----PEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFT 147

Query: 568 ----------------------YGIKPGPDHYA----CMIDLLGRSGKLIEAKALLDQMV 601
                                 + +K G   Y      ++++  +SG  + AK + D+M 
Sbjct: 148 LTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMK 207

Query: 602 GEPDATVWKALLSACRVHGDLELGERAANNLFELEPM--NAM 641
            +  ++ W  ++S+    G ++L +     + E + +  NAM
Sbjct: 208 LKSTSS-WNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAM 248


>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 839

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 297/756 (39%), Positives = 445/756 (58%), Gaps = 14/756 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFN--ETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D    N++I  Y+ S     A  +F   E   ++  ++SS+I  ++N    ++A E+F Q
Sbjct: 86  DTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQ 145

Query: 124 MQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC-FDLNAFVVTGLVDMYAKC 181
           + L+ G  P++Y    V+R C   G  + G    G+ +KT  FD +  V   L+DM+ K 
Sbjct: 146 LLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKG 205

Query: 182 KCIFEAEYLFKMFPD--GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE-GVESNQFTF 238
             + + E   K+F     KN V WT MIT  +Q GY  +AI+ F +M V  G   ++FT 
Sbjct: 206 CSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTL 265

Query: 239 PSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI 298
             +++ CA +     G ++H  ++ SG   ++ V  +L+DMYAKCG +  AR++ +    
Sbjct: 266 TGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMRE 325

Query: 299 DNEVSWNSMIVGFARQG--FHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNIDLNNA 355
            N +SW +++ G+ R G  + +EA+ +F  M  +  +  + FT+  VL   AS  D +  
Sbjct: 326 HNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFG 385

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA-- 413
           + VH   +K G      V N L+ +YAK G ++ A   F+++ +K+++S T +       
Sbjct: 386 EQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKD 445

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
           ++ + E+ L    +   SG+       +S+LS  A +  +  G+Q+HA+ +K G  + LS
Sbjct: 446 FNLNSEQDLDREVEYVGSGVSS--FTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLS 503

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
           V+N+L+ +Y+KCG    A +VF+ M   +VITWT++I G A++G   +AL+ +  ML  G
Sbjct: 504 VNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETG 563

Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
            KP+ +T++ +L ACSH GL + A  +F SM   +GI P  +HYACM+DLLGRSG L EA
Sbjct: 564 VKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEA 623

Query: 594 KALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTA 653
              ++ M  + DA VW+  L +CRVH + +LGE AA  + E EP +   Y+ LSN+Y+T 
Sbjct: 624 IEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATE 683

Query: 654 GKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLI 713
           G+WED A +RK MK + I KE G SW+E  +QVH F   D  HP    IY K+DE+ L I
Sbjct: 684 GRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLDELALKI 743

Query: 714 KEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCH 773
           K  GYVP+ +F LH+VE+E KE  L  HSEKLAVAF L++ P   PIR+FKNLRVCGDCH
Sbjct: 744 KNVGYVPNTDFVLHDVEDEQKEQYLFQHSEKLAVAFALISTPNPKPIRVFKNLRVCGDCH 803

Query: 774 TAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           TA+KYIS V  R I++RD+NRFHH K G CSC DYW
Sbjct: 804 TAIKYISMVSGREIVVRDANRFHHMKDGTCSCNDYW 839



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 8/144 (5%)

Query: 20  IGPARYTHNVGNSVKPASDL--NRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAA 76
           IG     H +   +   +DL  N AL+  +S  G  + A Q+F  M D +  TW ++I  
Sbjct: 483 IGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIING 542

Query: 77  YANSGRLREAKKLFN---ETPFK-NFFTWSSLIYGYSNYGLDIEAFELFWQMQ-LEGYRP 131
           +A  G   +A +LF    ET  K N  T+ +++   S+ GL  EA++ F  M+   G  P
Sbjct: 543 FAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVP 602

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQF 155
                  ++ L    GLL    +F
Sbjct: 603 RMEHYACMVDLLGRSGLLSEAIEF 626


>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 952

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 281/780 (36%), Positives = 432/780 (55%), Gaps = 36/780 (4%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
            D F  +  +  YA    +REA+ +F+  P ++  TW+SL   Y N G   +   +F +M
Sbjct: 174 EDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREM 233

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
            L+G +P   T+  +L  CS    L+ G+  HG+A+K     N FV   LV++Y  C C+
Sbjct: 234 VLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCV 293

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            EA+ +F + P  +N + W ++ + Y   G+  K +  FR+M + GV+ +     SIL A
Sbjct: 294 REAQAVFDLMPH-RNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPA 352

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C+ +     G  +HG  +  G   +V+V +AL+++YA C  +  A+ + +     N V+W
Sbjct: 353 CSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTW 412

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           NS+   +   GF ++ L++F++M    +K D  T  S+L+  +   DL + K +H   V+
Sbjct: 413 NSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVR 472

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT-------------- 410
            G     FV NAL+ +YAK   +  A +VF+L+  ++V SW  ++T              
Sbjct: 473 HGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYM 532

Query: 411 ---------------------GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE 449
                                GC  +   EEA++ F  M+  G  PD   + SIL AC+ 
Sbjct: 533 FSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSL 592

Query: 450 LTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTAL 509
              L  G+++H    +      L+  N+LV +YAKCG ++ +  VFD M  +DV +W  +
Sbjct: 593 SECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTM 652

Query: 510 IMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG 569
           I     +G GKEAL  +++ML    KPD  TF  +L ACSH+ L E     F SM + + 
Sbjct: 653 IFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHL 712

Query: 570 IKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAA 629
           ++P  +HY C++D+  R+G L EA   + +M  EP A  WKA L+ CRV+ ++EL + +A
Sbjct: 713 VEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISA 772

Query: 630 NNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIF 689
             LFE++P  +  YV L N+  TA  W +A+++RKLMK RGI K PGCSW    ++VH F
Sbjct: 773 KKLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTF 832

Query: 690 ISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAF 749
           ++ D+ +     IY+ +DE+   IK AGY PD ++ LH++++E K   L  HSEKLAVAF
Sbjct: 833 VAGDKSNMESDKIYNFLDELFAKIKAAGYKPDTDYVLHDIDQEEKAESLCNHSEKLAVAF 892

Query: 750 GLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           G+L L   + IR+FKNLR+CGDCH A+KY+S V    I++RDS RFHHFK GNCSC D+W
Sbjct: 893 GILNLNGQSTIRVFKNLRICGDCHNAIKYMSNVVGVTIVVRDSLRFHHFKNGNCSCKDFW 952



 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 184/663 (27%), Positives = 320/663 (48%), Gaps = 79/663 (11%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N  I AY     +  A+++F++   ++  TW+SL   Y N G   +   +F +M L   +
Sbjct: 79  NAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVK 138

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            +  T+ ++L  CS    L+ G++ HG+ ++     + FV +  V+ YAKC C+ EA+ +
Sbjct: 139 ANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTV 198

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F + P  ++ V W ++ + Y   G+  K +  FR+M ++GV+ +  T   IL+AC+ +  
Sbjct: 199 FDLMPH-RDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQD 257

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              G  +HG  L  G   NV+V +AL+++Y  C  +  A+ + +     N ++WNS+   
Sbjct: 258 LKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASC 317

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           +   GF ++ L++F++M    +K D     S+L   +   DL + K++H   VK G    
Sbjct: 318 YVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVED 377

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
            FV  AL+++YA    +  A  VF+LM  ++V++W SL +     G  ++ L  F +M +
Sbjct: 378 VFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVL 437

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
           +G+ PD V + SIL AC++L  L+ G+ +H   ++ G    + V N+L+ +YAKC C+ +
Sbjct: 438 NGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVRE 497

Query: 491 ANRVFDSMHTRDV-----------------------------------ITWTALIMGCAQ 515
           A  VFD +  R+V                                   ITW+ +I GC +
Sbjct: 498 AQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVK 557

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENAR---------------WY 560
           N + +EA++ + +M   G KPD  T   +L ACS   L+E  R               W 
Sbjct: 558 NSRIEEAMEIFRKMQTMGFKPDETTIYSILRACS---LSECLRMGKEIHCYVFRHWKDWD 614

Query: 561 FESMD----------------KVYGIKPGPDHYA--CMIDLLGRSGKLIEAKALLDQMV- 601
               +                 V+ + P  D ++   MI   G  G   EA +L ++M+ 
Sbjct: 615 LARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLL 674

Query: 602 --GEPDATVWKALLSACRVHGDLELGERAANNLFE---LEPMNAMPYVQLSNMYSTAGKW 656
              +PD+  +  +LSAC     +E G +  N++     +EP  A  Y  + ++YS AG  
Sbjct: 675 SMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEP-EAEHYTCVVDIYSRAGCL 733

Query: 657 EDA 659
           E+A
Sbjct: 734 EEA 736



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 141/519 (27%), Positives = 261/519 (50%), Gaps = 11/519 (2%)

Query: 111 YGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV 170
           +GL  EA +++   +  G +P +     V + C+      + +QFH  A +     +  +
Sbjct: 18  HGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSI 77

Query: 171 VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG 230
               +  Y KCKC+  A  +F      ++ V W ++   Y   G+  + +  FR M +  
Sbjct: 78  GNAFIHAYGKCKCVEGARRVFDDLV-ARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNK 136

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           V++N  T  SIL  C+ +     G ++HG ++  G   +V+V SA ++ YAKC  +  A+
Sbjct: 137 VKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQ 196

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
            + +     + V+WNS+   +   GF ++ L++F++M    +K D  T   +L+  +   
Sbjct: 197 TVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQ 256

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           DL + K++H   +K G     FV+NAL+++Y     +  A  VF+LM  ++VI+W SL +
Sbjct: 257 DLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLAS 316

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
                G  ++ L  F +M ++G+ PD + +SSIL AC++L  L+ G+ +H   +K G   
Sbjct: 317 CYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVE 376

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
            + V  +LV +YA C C+ +A  VFD M  R+V+TW +L       G  ++ L  + +M+
Sbjct: 377 DVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMV 436

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPG--PDHYAC--MIDLLGR 586
             G KPD +T + +L ACS     ++ +     +   + ++ G   D + C  ++ L  +
Sbjct: 437 LNGVKPDLVTMLSILHACSDLQDLKSGK-----VIHGFAVRHGMVEDVFVCNALLSLYAK 491

Query: 587 SGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELG 625
              + EA+ + D ++   +   W  +L+A   + + E G
Sbjct: 492 CVCVREAQVVFD-LIPHREVASWNGILTAYFTNKEYEKG 529



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 129/265 (48%), Gaps = 7/265 (2%)

Query: 52  IDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF----FTWSSLIYG 107
           + EA  +F+ +  R+  +WN ++ AY  +    +   +F++           TWS +I G
Sbjct: 495 VREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGG 554

Query: 108 YSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLN 167
                   EA E+F +MQ  G++P + T+ ++LR CSL   L+ G++ H Y  +   D +
Sbjct: 555 CVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWD 614

Query: 168 AFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR 227
                 LVDMYAKC  +  +  +F M P  K+  +W TMI     +G G +A+  F  M 
Sbjct: 615 LARTNALVDMYAKCGGLSLSRNVFDMMPI-KDVFSWNTMIFANGMHGNGKEALSLFEKML 673

Query: 228 VEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF-EANVYVQSALIDMYAKCGDL 286
           +  V+ +  TF  +L+AC+     + G Q+   +      E      + ++D+Y++ G L
Sbjct: 674 LSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCL 733

Query: 287 DSARRLLEYSEID-NEVSWNSMIVG 310
           + A   ++   ++   ++W + + G
Sbjct: 734 EEAYGFIQRMPMEPTAIAWKAFLAG 758


>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Brachypodium distachyon]
          Length = 1206

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 284/744 (38%), Positives = 420/744 (56%), Gaps = 1/744 (0%)

Query: 66   DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
            D F  N ++  Y   G    A ++F+  P +N  ++ +L+ G++  G   EA  LF +++
Sbjct: 464  DLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLR 523

Query: 126  LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             EG+  +Q+ L  VL+L      L      H  A K   D NAFV + L+D Y+ C  + 
Sbjct: 524  WEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVS 583

Query: 186  EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            +A  +F     GK+ VAWT M++ YS+N      ++ F  MRV   + N F   S+L A 
Sbjct: 584  DARRVFDGI-VGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAA 642

Query: 246  AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
              +S+   G  +H C + + ++   +V  AL+DMYAKCG+++ AR   E    D+ + W+
Sbjct: 643  VCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWS 702

Query: 306  SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
             MI  +A+   +++A  LF +M    +  ++F+  SVL   A+   L+  K +H+  +K 
Sbjct: 703  LMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKI 762

Query: 366  GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
            G E   FV NALID+YAK  +++ +  +F+ ++D + +SW ++I G +  G  E AL  F
Sbjct: 763  GHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVF 822

Query: 426  SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             +MR + +    V  SS+L ACA    +    QVH +  KS   S   V NSL+  YAKC
Sbjct: 823  REMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKC 882

Query: 486  GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
            GCI DA  +F+++   D+++W A+I G A +G+   A + +D M     K + ITFV LL
Sbjct: 883  GCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALL 942

Query: 546  FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
              C   GL       F+SM   +GI+P  +HY C++ LLGR+G+L +A   +  +   P 
Sbjct: 943  SVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPS 1002

Query: 606  ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
            A VW+ALLS+C VH ++ELG  +A  + E+EP +   YV LSNMYS AG  +  A  RK 
Sbjct: 1003 AMVWRALLSSCIVHKNVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKS 1062

Query: 666  MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFA 725
            M++ G+RKEPG SWVE   +VH F      HP    I + ++ + L     GYVPD +  
Sbjct: 1063 MRNIGVRKEPGLSWVEIKGEVHAFSVGSEDHPCMRVINAMLEWLNLKAIREGYVPDTDEV 1122

Query: 726  LHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLR 785
            LH++EEE K   L  HSE+LA+A+GL+  P G PIRI KNLR C DCH   K IS +  +
Sbjct: 1123 LHDLEEEQKVRMLWVHSERLALAYGLVMTPPGHPIRIMKNLRSCLDCHAIFKVISKIVKQ 1182

Query: 786  HIILRDSNRFHHFKAGNCSCGDYW 809
             II+RD NRFHHF+ G CSCGDYW
Sbjct: 1183 EIIVRDINRFHHFEEGTCSCGDYW 1206



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 156/513 (30%), Positives = 266/513 (51%), Gaps = 5/513 (0%)

Query: 64   DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
            DR+ F  + +I AY+  G + +A+++F+    K+   W++++  YS         ++F +
Sbjct: 563  DRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSK 622

Query: 124  MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
            M++   + + + L +VLR       +  G+  H  ++KT +D    V   L+DMYAKC  
Sbjct: 623  MRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGN 682

Query: 184  IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
            I +A   F+M  +  + + W+ MI+ Y+Q     +A E F  M    V  N+F+  S+L 
Sbjct: 683  IEDARLAFEMVTN-DDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQ 741

Query: 244  ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
            ACA +   D G Q+H   +  G E+ ++V +ALID+YAKC D++S+  +       NEVS
Sbjct: 742  ACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVS 801

Query: 304  WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
            WN++IVG+++ GF + ALS+F++M A  +     TY SVL   AS   +N+   VH LI 
Sbjct: 802  WNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIE 861

Query: 364  KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
            K+ F     V+N+LID YAK G +  A  +F  +++ D++SW ++I+G A HG    A +
Sbjct: 862  KSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQE 921

Query: 424  YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV-HAVFLKSGGCSSLSVDNSLVLVY 482
             F  M  + I  + +   ++LS C    ++  G  +  ++ L  G   S+     +V + 
Sbjct: 922  LFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLL 981

Query: 483  AKCGCINDA-NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
             + G +NDA N + D       + W AL+  C  + K  E  +F  + +      D  T+
Sbjct: 982  GRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVH-KNVELGRFSAEKVLEIEPQDETTY 1040

Query: 542  VGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
            V L    S AG  +   ++ +SM  + G++  P
Sbjct: 1041 VLLSNMYSAAGSLDQVAFFRKSMRNI-GVRKEP 1072



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 171/326 (52%), Gaps = 4/326 (1%)

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEA--NVYVQSALIDMYAKCGDLD 287
           GV+S  + +  +L  C A      G  VHG ++ SG  A  +++  + L++MY K G   
Sbjct: 425 GVDS--YAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFG 482

Query: 288 SARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFA 347
           SA R+ +     N VS+ +++ G A +G  +EA +LF+++     +++ F   +VL    
Sbjct: 483 SAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVV 542

Query: 348 SNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTS 407
           +   L  A  VH+   K G +   FV +ALID Y+  G +  A  VF+ +  KD ++WT+
Sbjct: 543 AMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTA 602

Query: 408 LITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG 467
           +++  + +   E  L+ FS MR++    +   ++S+L A   L+ +  G+ +HA  +K+ 
Sbjct: 603 MVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTL 662

Query: 468 GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYD 527
             +   V  +L+ +YAKCG I DA   F+ +   DVI W+ +I   AQ  + ++A + + 
Sbjct: 663 YDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFI 722

Query: 528 QMLARGTKPDYITFVGLLFACSHAGL 553
           +M+     P+  +   +L AC++  L
Sbjct: 723 RMMRSSVSPNEFSLSSVLQACANMPL 748



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 22/207 (10%)

Query: 421 ALKYFSDMRISGICP----DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV-- 474
           AL++  D   S   P    D    + +L  C        G+ VH   ++SGG + L +  
Sbjct: 408 ALQWLEDELTSLAFPWPGVDSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFC 467

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
            N L+ +Y K G    A+RVFD +  R+++++  L+ G A  G+ +EA   + ++   G 
Sbjct: 468 ANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGH 527

Query: 535 KPD---YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA----CMIDLLGRS 587
           + +     T + L+ A    GLA    W   +       K G D  A     +ID     
Sbjct: 528 EVNQFVLTTVLKLVVAMDTLGLA----WGVHAC----ACKLGHDRNAFVGSALIDAYSMC 579

Query: 588 GKLIEAKALLDQMVGEPDATVWKALLS 614
           G + +A+ + D +VG+ DA  W A++S
Sbjct: 580 GVVSDARRVFDGIVGK-DAVAWTAMVS 605



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 6/125 (4%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN----ET 93
           ++ +L+D ++  G I +A ++FE + + D  +WN +I+ YA  G+   A++LF+     +
Sbjct: 871 VSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNS 930

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRG 152
              N  T+ +L+    + GL  +   LF  M+L+ G  PS      ++RL    G L   
Sbjct: 931 IKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDA 990

Query: 153 EQFHG 157
             F G
Sbjct: 991 LNFIG 995


>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
 gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
          Length = 818

 Score =  534 bits (1375), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 288/810 (35%), Positives = 456/810 (56%), Gaps = 48/810 (5%)

Query: 43  LVDFSNSGEIDEAGQLFEKMS----DRDGFTWNTMIAAYANSGRLREAKKLFNETPFK-- 96
           L   S+ G++ E   L E++     +RD    N +I+ Y     L +A+ +F    ++  
Sbjct: 14  LCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQR 73

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
           N  +W+++I  Y+  G   EA  L+W+M L+G      T  +VL  CS    L +G + H
Sbjct: 74  NVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS---SLAQGREIH 130

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
                +  D    +   LV MYA+   + +A+ +F+     ++  +W  +I  +SQ+G  
Sbjct: 131 NRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQT-RDETSWNAVILAHSQSGDW 189

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
             A+  F++M+ + ++ N  T+ ++++  +       G ++H  I+++GF++++ V +AL
Sbjct: 190 SGALRIFKEMKCD-MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATAL 248

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           I+MY KCG    AR + +  +  + VSWN MI  + + G   EAL L++K+     K   
Sbjct: 249 INMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTK 308

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
            T+ S+L   +S   L   + VHS I++ G +    V  AL++MYAK G+L+ A  VFN 
Sbjct: 309 ATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNA 368

Query: 397 MQDKDVISWTSLITGCAYHGSYEE----------------------------------AL 422
           M+++D ++W++LI   A +G  ++                                  A+
Sbjct: 369 MKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAM 428

Query: 423 KYFSDMR-ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           K F +M   +G+ PD V   ++L ACA L  L   + +HA   +S   S++ V N+L+ +
Sbjct: 429 KIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINM 488

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           YA+CG + +A R+F +   + V++WTA++   +Q G+  EAL  + +M   G KPD +T+
Sbjct: 489 YARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTY 548

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
             +LF C+H G  E    YF  M +++G+ P  DH+A M+DLLGRSG+L +AK LL+ M 
Sbjct: 549 TSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMP 608

Query: 602 GEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
            EPD   W   L+ACR+HG LELGE AA  ++EL+P +  PY+ +SN+Y+  G WE  A 
Sbjct: 609 FEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVAS 668

Query: 662 VRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPD 721
           VRK M+ RG++K PG S++E + ++H F S  + HP   +I  ++  +  L++ AGYVPD
Sbjct: 669 VRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPD 728

Query: 722 MNFALHNVEEEGKEIGLAYHSEKLAVAFGLL-TLPQGAPIRIFKNLRVCGDCHTAMKYIS 780
               LH+V E  KE  L YHSEK+A+AFGL+ +   G PIR+ KNLRVC DCHTA K+I+
Sbjct: 729 TKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIA 788

Query: 781 AVYLRHIILRDSNRFHHFKA-GNCSCGDYW 809
            +  R IILRD NRFH F + G CSCGDYW
Sbjct: 789 RIAGRDIILRDCNRFHRFSSDGKCSCGDYW 818



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 162/553 (29%), Positives = 284/553 (51%), Gaps = 20/553 (3%)

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           +P   T   VL  CS  G +  G   H     + F+ +  V   L+ MY KC  + +A  
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63

Query: 190 LFK-MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
           +F+ M    +N V+W  MI  Y+QNG+  +A+  +  M ++G+ ++  TF S+L AC+++
Sbjct: 64  VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
           +    G ++H  +  SG ++   + +AL+ MYA+ G +  A+R+ +  +  +E SWN++I
Sbjct: 124 AQ---GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVI 180

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
           +  ++ G    AL +FK+M   D+K +  TY +V++ F++   L   + +H+ IV  GF+
Sbjct: 181 LAHSQSGDWSGALRIFKEMKC-DMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFD 239

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
               V  ALI+MY K G+   A  VF+ M+ +D++SW  +I     +G + EAL+ +  +
Sbjct: 240 SDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKL 299

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
            + G         SIL AC+ +  L  G+ VH+  L+ G  S ++V  +LV +YAKCG +
Sbjct: 300 DMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSL 359

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKE---ALQFYDQMLARGTKPDYITFVGLL 545
            +A +VF++M  RD + W+ LI   A NG GK+   A + +D++ +R    D I +  ++
Sbjct: 360 EEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSR----DTICWNAMI 415

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG--- 602
                 G A  A   F  M    G+KP    +  +++     G+L E KAL  Q+     
Sbjct: 416 TTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESEL 475

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLF-ELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
           E +  V   L++     G LE  ER    LF   +    + +  +   +S  G++ +A  
Sbjct: 476 ESNVVVTNTLINMYARCGSLEEAER----LFAAAKEKTVVSWTAMVAAFSQYGRYAEALD 531

Query: 662 VRKLMKSRGIRKE 674
           + + M   G++ +
Sbjct: 532 LFQEMDLEGVKPD 544



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 147/294 (50%), Gaps = 8/294 (2%)

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
           D + D+ T+ +VL   +S  D+   +++H  I  + FE    V NALI MY K  +L  A
Sbjct: 2   DRQPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDA 61

Query: 391 FMVFNLM--QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
             VF  M  + ++V+SW ++I   A +G   EAL  +  M + G+  DHV   S+L AC+
Sbjct: 62  RSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS 121

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
            L     G+++H     SG  S  S+ N+LV +YA+ G + DA R+F S+ TRD  +W A
Sbjct: 122 SLAQ---GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNA 178

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
           +I+  +Q+G    AL+ + +M     KP+  T++ ++   S   +    R     +    
Sbjct: 179 VILAHSQSGDWSGALRIFKEMKC-DMKPNSTTYINVISGFSTPEVLPEGRKIHAEI-VAN 236

Query: 569 GIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDL 622
           G          +I++ G+ G   EA+ + D+M  + D   W  ++     +GD 
Sbjct: 237 GFDSDLVVATALINMYGKCGSSHEAREVFDKM-KKRDMVSWNVMIGCYVQNGDF 289


>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  533 bits (1374), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 285/691 (41%), Positives = 423/691 (61%), Gaps = 24/691 (3%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           PS Y  ++ + L S  G L    +    A +   D N F    ++  YAK      A  L
Sbjct: 41  PSTYFSNHFILLYSKCGRLAWARK----AFQDISDPNVFSFNAIIAAYAKESRPLIAHQL 96

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P+  + V++ T+I+ Y+  G    A+  F  MR  G++ + FT  +++TAC     
Sbjct: 97  FDQIPE-PDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITACC---- 151

Query: 251 RDFG--AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL-EYSEIDNEVSWNSM 307
            D G   Q+H   +SSGF++ V V +AL+  Y K GDLD A+R+      I +EVSWNSM
Sbjct: 152 DDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSM 211

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           IV + +     +AL LF++M  R + +D FT  SVL  F    DL+     H  ++KTGF
Sbjct: 212 IVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGF 271

Query: 368 EGYKFVNNALIDMYAKQGN--LDCAFMVFNLMQDKDVISWTSLITGCAYHGSY-EEALKY 424
                V + LID+Y+K G    DC   VF  + + D++ W ++++G + +  + E+AL+ 
Sbjct: 272 HQNSHVGSGLIDLYSKCGGGMSDCR-KVFEEITEPDLVLWNTMVSGYSQNEEFLEDALEC 330

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYA 483
           F  M+  G  P+      ++SAC+ L+    G+Q+H++ LKS   S+ +SVDN+L+ +Y+
Sbjct: 331 FRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYS 390

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG + DA R+FD M   + ++  ++I G AQ+G   E+L  +  ML R   P  ITF+ 
Sbjct: 391 KCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFIS 450

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           +L AC+H G  E    YF  M + + I+P  +HY+CMIDLLGR+GKL EA+ L+ +M   
Sbjct: 451 VLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFN 510

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
           P +  W +LL ACR HG++EL  +AAN + +LEP NA PYV LSNMY++AG+WE+ A VR
Sbjct: 511 PGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVR 570

Query: 664 KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMN 723
           K M+ RG++K+PGCSW+E   ++H+F++ED  HP+  +IY  ++E+   +K AGYVPD+ 
Sbjct: 571 KFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVR 630

Query: 724 FALHNVEEEG-----KEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKY 778
           +AL  V+++G     KEI L +HSEKLAVAFGL++   G P+ + KNLR+CGDCH A+K+
Sbjct: 631 WAL--VKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKF 688

Query: 779 ISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           ISA+  R I +RD++RFH FK G CSCGDYW
Sbjct: 689 ISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 145/497 (29%), Positives = 253/497 (50%), Gaps = 9/497 (1%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  ++ +S  G +  A + F+ +SD + F++N +IAAYA   R   A +LF++ P  +  
Sbjct: 47  NHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLV 106

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLK-GLLQRGEQFHGY 158
           ++++LI  Y++ G    A  LF  M+  G     +TL  V+  C    GL+    Q H  
Sbjct: 107 SYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITACCDDVGLIG---QLHSV 163

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFK 218
           A+ + FD    V   L+  Y K   + +A+ +F      ++ V+W +MI  Y Q+  G K
Sbjct: 164 AVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSK 223

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID 278
           A+  F++M   G+  + FT  S+LTA   +     G Q HG ++ +GF  N +V S LID
Sbjct: 224 ALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLID 283

Query: 279 MYAKC-GDLDSARRLLEYSEIDNEVSWNSMIVGFAR-QGFHKEALSLFKKMHARDIKIDD 336
           +Y+KC G +   R++ E     + V WN+M+ G+++ + F ++AL  F++M     + +D
Sbjct: 284 LYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPND 343

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF-VNNALIDMYAKQGNLDCAFMVFN 395
            ++  V++  ++    +  K +HSL +K+     +  V+NALI MY+K GNL  A  +F+
Sbjct: 344 CSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFD 403

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
            M + + +S  S+I G A HG   E+L  F  M    I P  +   S+LSACA    +E 
Sbjct: 404 RMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEE 463

Query: 456 GQQVHAVFLKSGGCSSLSVDNS-LVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMGC 513
           G     +  +       +   S ++ +  + G +++A  +   M      I W +L+  C
Sbjct: 464 GWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGAC 523

Query: 514 AQNGKGKEALQFYDQML 530
             +G  + A++  +Q+L
Sbjct: 524 RTHGNIELAVKAANQVL 540



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 190/419 (45%), Gaps = 41/419 (9%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           F  +L  C A      G  +H   + S    + Y  +  I +Y+KCG L  AR+  +   
Sbjct: 11  FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70

Query: 298 IDNEVSWNSMIVGFARQ-------------------------------GFHKEALSLFKK 326
             N  S+N++I  +A++                               G    AL LF  
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
           M    + +D FT  +V+     ++ L     +HS+ V +GF+ Y  VNNAL+  Y K G+
Sbjct: 131 MREMGLDMDXFTLSAVITACCDDVGL--IGQLHSVAVSSGFDSYVSVNNALLTYYGKNGD 188

Query: 387 LDCAFMVFNLMQD-KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
           LD A  VF  M   +D +SW S+I     H    +AL  F +M   G+  D   ++S+L+
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC-GCINDANRVFDSMHTRDVI 504
           A   L  L  G Q H   +K+G   +  V + L+ +Y+KC G ++D  +VF+ +   D++
Sbjct: 249 AFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLV 308

Query: 505 TWTALIMGCAQNGKGKE-ALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFES 563
            W  ++ G +QN +  E AL+ + QM   G +P+  +FV ++ ACS+       +     
Sbjct: 309 LWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSL 368

Query: 564 MDK--VYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
             K  +   +   D+   +I +  + G L +A+ L D+M  E +     ++++    HG
Sbjct: 369 ALKSDIPSNRISVDN--ALIAMYSKCGNLQDARRLFDRM-AEHNTVSLNSMIAGYAQHG 424



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 39/218 (17%)

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
           +L  C     L  G+ +H++++KS    S    N  +L+Y+KCG +  A + F  +   +
Sbjct: 14  LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
           V ++ A+I   A+  +   A Q +DQ+     +PD +++  L+ A +  G    A   F 
Sbjct: 74  VFSFNAIIAAYAKESRPLIAHQLFDQI----PEPDLVSYNTLISAYADCGETAPALGLFS 129

Query: 563 SMDKV----------------------------YGIKPGPDHYACMIDLL----GRSGKL 590
            M ++                              +  G D Y  + + L    G++G L
Sbjct: 130 GMREMGLDMDXFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDL 189

Query: 591 IEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
            +AK +   M G  D   W +++ A   +G  + G +A
Sbjct: 190 DDAKRVFYGMGGIRDEVSWNSMIVA---YGQHQEGSKA 224


>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  533 bits (1374), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 282/678 (41%), Positives = 396/678 (58%), Gaps = 8/678 (1%)

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
           ++ L+N  +L SLK       Q H   + T    +   +  L+ +YAKC  I     LF 
Sbjct: 101 KHLLNNAAKLKSLK----HATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFN 156

Query: 193 MFP-DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
            +P    N V WTT+I   S++   F+A+  F  MR  G+  N FTF +IL ACA  +  
Sbjct: 157 TYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALL 216

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
             G Q+H  I    F  + +V +AL+DMYAKCG +  A  + +     N VSWNSMIVGF
Sbjct: 217 SEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGF 276

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
            +   +  A+ +F+++    +  D  +  SVL+  A  ++L+  K VH  IVK G  G  
Sbjct: 277 VKNKLYGRAIGVFREV--LSLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLV 334

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
           +V N+L+DMY K G  + A  +F    D+DV++W  +I GC    ++E+A  YF  M   
Sbjct: 335 YVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIRE 394

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
           G+ PD    SS+  A A +  L  G  +H+  LK+G   +  + +SLV +Y KCG + DA
Sbjct: 395 GVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDA 454

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
            +VF      +V+ WTA+I    Q+G   EA++ +++ML  G  P+YITFV +L ACSH 
Sbjct: 455 YQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHT 514

Query: 552 GLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKA 611
           G  ++   YF SM  V+ IKPG +HYACM+DLLGR G+L EA   ++ M  EPD+ VW A
Sbjct: 515 GKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGA 574

Query: 612 LLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
           LL AC  H ++E+G   A  LF+LEP N   Y+ LSN+Y   G  E+A  VR+LM   G+
Sbjct: 575 LLGACGKHANVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGV 634

Query: 672 RKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEE 731
           RKE GCSW++  ++  +F + DR H    +IY  + ++  LIK  GYV +  FA ++V E
Sbjct: 635 RKESGCSWIDVKNRTFVFNANDRSHSRTQEIYGMLQKLKELIKRRGYVAETQFATNSV-E 693

Query: 732 EGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRD 791
             +E  L  HSEKLA+AFGLL LP G+P+RI KNLR CGDCHT MK+ S ++ R II+RD
Sbjct: 694 GSEEQSLWCHSEKLALAFGLLVLPPGSPVRIKKNLRTCGDCHTVMKFASEIFQREIIVRD 753

Query: 792 SNRFHHFKAGNCSCGDYW 809
            NRFH F  G+CSC DYW
Sbjct: 754 INRFHRFTNGSCSCMDYW 771



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 161/531 (30%), Positives = 260/531 (48%), Gaps = 52/531 (9%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFK--NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG 128
           NT++  YA  G +     LFN  P    N  TW++LI   S      +A   F +M+  G
Sbjct: 136 NTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTG 195

Query: 129 YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
             P+ +T   +L  C+   LL  G+Q H    K CF  + FV T L+DMYAKC  +  AE
Sbjct: 196 IYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAE 255

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
            +F   P  +N V+W +MI G+ +N    +AI  FR++   G   +Q +  S+L+ACA +
Sbjct: 256 NVFDEMPH-RNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG--PDQVSISSVLSACAGL 312

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
              DFG QVHG I+  G    VYV+++L+DMY KCG  + A +L       + V+WN MI
Sbjct: 313 VELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMI 372

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
           +G  R    ++A + F+ M    ++ D+ +Y S+ +  AS   L     +HS ++KTG  
Sbjct: 373 MGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHV 432

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
               ++++L+ MY K G++  A+ VF   ++ +V+ WT++IT    HG   EA+K F +M
Sbjct: 433 KNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEM 492

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
              G+ P+++   S+LSAC+                                     G I
Sbjct: 493 LNEGVVPEYITFVSVLSACSH-----------------------------------TGKI 517

Query: 489 NDANRVFDSMHTRDVIT-----WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           +D  + F+SM     I      +  ++    + G+ +EA +F + M     +PD + +  
Sbjct: 518 DDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESM---PFEPDSLVWGA 574

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKP-GPDHYACMIDLLGRSGKLIEA 593
           LL AC      E  R   E  ++++ ++P  P +Y  + ++  R G L EA
Sbjct: 575 LLGACGKHANVEMGR---EVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEA 622



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 202/427 (47%), Gaps = 35/427 (8%)

Query: 6   FKILNFSLRCRSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDR 65
           F+ L F  R R+  I P  +T +   ++ PA          +++  + E  Q+   +   
Sbjct: 182 FQALTFFNRMRTTGIYPNHFTFS---AILPAC---------AHAALLSEGQQIHALIHKH 229

Query: 66  ----DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELF 121
               D F    ++  YA  G +  A+ +F+E P +N  +W+S+I G+    L   A  +F
Sbjct: 230 CFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVF 289

Query: 122 WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
            ++   G  P Q ++ +VL  C+    L  G+Q HG  +K       +V   LVDMY KC
Sbjct: 290 REVLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKC 347

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
               +A  LF    D ++ V W  MI G  +     +A   F+ M  EGVE ++ ++ S+
Sbjct: 348 GLFEDATKLFCGGGD-RDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSL 406

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
             A A+++A   G  +H  +L +G   N  + S+L+ MY KCG +  A ++   ++  N 
Sbjct: 407 FHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNV 466

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC--FASNID-----LNN 354
           V W +MI  F + G   EA+ LF++M    +  +  T+ SVL+       ID      N+
Sbjct: 467 VCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNS 526

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD--CAFMVFNLMQDKDVISWTSLITGC 412
             +VH+  +K G E Y      ++D+  + G L+  C F + ++  + D + W +L+  C
Sbjct: 527 MANVHN--IKPGLEHYA----CMVDLLGRVGRLEEACRF-IESMPFEPDSLVWGALLGAC 579

Query: 413 AYHGSYE 419
             H + E
Sbjct: 580 GKHANVE 586



 Score = 43.1 bits (100), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 15/222 (6%)

Query: 21  GPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           G   ++H +       S ++ +LV  +   G + +A Q+F +  + +   W  MI  +  
Sbjct: 419 GTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQ 478

Query: 80  SGRLREAKKLF----NETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQY 134
            G   EA KLF    NE     + T+ S++   S+ G   + F+ F  M  +   +P   
Sbjct: 479 HGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPG-- 536

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV---VTGLVDMYAKCKCIFE-AEYL 190
            L++   +  L G + R E+   +     F+ ++ V   + G    +A  +   E AE L
Sbjct: 537 -LEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERL 595

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
           FK+ PD   +    + I  Y ++G   +A E  R M + GV 
Sbjct: 596 FKLEPDNPGNYMLLSNI--YIRHGMLEEADEVRRLMGINGVR 635


>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  533 bits (1374), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 285/691 (41%), Positives = 423/691 (61%), Gaps = 24/691 (3%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           PS Y  ++ + L S  G L    +    A +   D N F    ++  YAK      A  L
Sbjct: 41  PSTYFSNHFILLYSKCGRLAWARK----AFQDISDPNVFSFNAIIAAYAKESRPLIAHQL 96

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P+  + V++ T+I+ Y+  G    A+  F  MR  G++ + FT  +++TAC     
Sbjct: 97  FDQIPE-PDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACC---- 151

Query: 251 RDFG--AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL-EYSEIDNEVSWNSM 307
            D G   Q+H   +SSGF++ V V +AL+  Y K GDLD A+R+      I +EVSWNSM
Sbjct: 152 DDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSM 211

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           IV + +     +AL LF++M  R + +D FT  SVL  F    DL+     H  ++KTGF
Sbjct: 212 IVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGF 271

Query: 368 EGYKFVNNALIDMYAKQGN--LDCAFMVFNLMQDKDVISWTSLITGCAYHGSY-EEALKY 424
                V + LID+Y+K G    DC   VF  + + D++ W ++++G + +  + E+AL+ 
Sbjct: 272 HQNSHVGSGLIDLYSKCGGGMSDCR-KVFEEITEPDLVLWNTMVSGYSQNEEFLEDALEC 330

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYA 483
           F  M+  G  P+      ++SAC+ L+    G+Q+H++ LKS   S+ +SVDN+L+ +Y+
Sbjct: 331 FRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYS 390

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG + DA R+FD M   + ++  ++I G AQ+G   E+L  +  ML R   P  ITF+ 
Sbjct: 391 KCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFIS 450

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           +L AC+H G  E    YF  M + + I+P  +HY+CMIDLLGR+GKL EA+ L+ +M   
Sbjct: 451 VLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFN 510

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
           P +  W +LL ACR HG++EL  +AAN + +LEP NA PYV LSNMY++AG+WE+ A VR
Sbjct: 511 PGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVR 570

Query: 664 KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMN 723
           K M+ RG++K+PGCSW+E   ++H+F++ED  HP+  +IY  ++E+   +K AGYVPD+ 
Sbjct: 571 KFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVR 630

Query: 724 FALHNVEEEG-----KEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKY 778
           +AL  V+++G     KEI L +HSEKLAVAFGL++   G P+ + KNLR+CGDCH A+K+
Sbjct: 631 WAL--VKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKF 688

Query: 779 ISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           ISA+  R I +RD++RFH FK G CSCGDYW
Sbjct: 689 ISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 145/497 (29%), Positives = 253/497 (50%), Gaps = 9/497 (1%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  ++ +S  G +  A + F+ +SD + F++N +IAAYA   R   A +LF++ P  +  
Sbjct: 47  NHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLV 106

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLK-GLLQRGEQFHGY 158
           ++++LI  Y++ G    A  LF  M+  G     +TL  V+  C    GL+    Q H  
Sbjct: 107 SYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGLIG---QLHSV 163

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFK 218
           A+ + FD    V   L+  Y K   + +A+ +F      ++ V+W +MI  Y Q+  G K
Sbjct: 164 AVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSK 223

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID 278
           A+  F++M   G+  + FT  S+LTA   +     G Q HG ++ +GF  N +V S LID
Sbjct: 224 ALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLID 283

Query: 279 MYAKC-GDLDSARRLLEYSEIDNEVSWNSMIVGFAR-QGFHKEALSLFKKMHARDIKIDD 336
           +Y+KC G +   R++ E     + V WN+M+ G+++ + F ++AL  F++M     + +D
Sbjct: 284 LYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPND 343

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF-VNNALIDMYAKQGNLDCAFMVFN 395
            ++  V++  ++    +  K +HSL +K+     +  V+NALI MY+K GNL  A  +F+
Sbjct: 344 CSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFD 403

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
            M + + +S  S+I G A HG   E+L  F  M    I P  +   S+LSACA    +E 
Sbjct: 404 RMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEE 463

Query: 456 GQQVHAVFLKSGGCSSLSVDNS-LVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMGC 513
           G     +  +       +   S ++ +  + G +++A  +   M      I W +L+  C
Sbjct: 464 GWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGAC 523

Query: 514 AQNGKGKEALQFYDQML 530
             +G  + A++  +Q+L
Sbjct: 524 RTHGNIELAVKAANQVL 540



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 190/419 (45%), Gaps = 41/419 (9%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           F  +L  C A      G  +H   + S    + Y  +  I +Y+KCG L  AR+  +   
Sbjct: 11  FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70

Query: 298 IDNEVSWNSMIVGFARQ-------------------------------GFHKEALSLFKK 326
             N  S+N++I  +A++                               G    AL LF  
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
           M    + +D FT  +V+     ++ L     +HS+ V +GF+ Y  VNNAL+  Y K G+
Sbjct: 131 MREMGLDMDGFTLSAVITACCDDVGL--IGQLHSVAVSSGFDSYVSVNNALLTYYGKNGD 188

Query: 387 LDCAFMVFNLMQD-KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
           LD A  VF  M   +D +SW S+I     H    +AL  F +M   G+  D   ++S+L+
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC-GCINDANRVFDSMHTRDVI 504
           A   L  L  G Q H   +K+G   +  V + L+ +Y+KC G ++D  +VF+ +   D++
Sbjct: 249 AFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLV 308

Query: 505 TWTALIMGCAQNGKGKE-ALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFES 563
            W  ++ G +QN +  E AL+ + QM   G +P+  +FV ++ ACS+       +     
Sbjct: 309 LWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSL 368

Query: 564 MDK--VYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
             K  +   +   D+   +I +  + G L +A+ L D+M  E +     ++++    HG
Sbjct: 369 ALKSDIPSNRISVDN--ALIAMYSKCGNLQDARRLFDRM-AEHNTVSLNSMIAGYAQHG 424



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 39/218 (17%)

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
           +L  C     L  G+ +H++++KS    S    N  +L+Y+KCG +  A + F  +   +
Sbjct: 14  LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
           V ++ A+I   A+  +   A Q +DQ+     +PD +++  L+ A +  G    A   F 
Sbjct: 74  VFSFNAIIAAYAKESRPLIAHQLFDQI----PEPDLVSYNTLISAYADCGETAPALGLFS 129

Query: 563 SMDKV----------------------------YGIKPGPDHYACMIDLL----GRSGKL 590
            M ++                              +  G D Y  + + L    G++G L
Sbjct: 130 GMREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDL 189

Query: 591 IEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
            +AK +   M G  D   W +++ A   +G  + G +A
Sbjct: 190 DDAKRVFYGMGGIRDEVSWNSMIVA---YGQHQEGSKA 224


>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 716

 Score =  533 bits (1373), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 277/717 (38%), Positives = 423/717 (58%), Gaps = 3/717 (0%)

Query: 94  PFKNFFTWSSLIYGY-SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
           P +N  ++ +LI GY  ++ LD E  +LF ++  EG+  + +    +L+L       +  
Sbjct: 2   PDRNTVSFVTLIQGYVQSFQLD-EVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
              H    K   + NAFV T L+D YA C  +  A   F      K+ V+WT M+  Y++
Sbjct: 61  YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIA-CKDMVSWTGMVACYAE 119

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYV 272
           N     +++ F +MR+ G   N FTF  +L AC  + A   G  VHGC+L + +E ++YV
Sbjct: 120 NDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYV 179

Query: 273 QSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI 332
              L+D+Y K GD +   R+ E     + + W+ MI  +A+    +EA+ LF +M    +
Sbjct: 180 GVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFV 239

Query: 333 KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM 392
             + FT+ SVL   AS  +L   K VH  ++K G +G  FV+NAL+D+YAK G LD +  
Sbjct: 240 LPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMK 299

Query: 393 VFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV 452
           +F  + +++ ++W ++I G    G  ++AL  + +M    +    V  SS+L ACA L  
Sbjct: 300 LFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAA 359

Query: 453 LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMG 512
           +E G Q+H++ LK+     + V N+L+ +YAKCG I +A  VFD +  RD I+W A+I G
Sbjct: 360 MELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISG 419

Query: 513 CAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKP 572
            + +G   EAL+ +  M      P+ +TFV +L ACS+AGL +  + YF+SM + YGI+P
Sbjct: 420 YSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEP 479

Query: 573 GPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNL 632
             +HY CM+ LLGRSG L +A  L++++  EP+  VW+ALL AC +H D++LG  +A  +
Sbjct: 480 CMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQI 539

Query: 633 FELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISE 692
            +++P +   +V LSN+Y+   +W   A VRK MK++G++KEPG SW+E    VH F   
Sbjct: 540 LQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVG 599

Query: 693 DRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLL 752
           D  HP    I   ++ + +  ++AGYVPD+N  L +VE++ K+  L  HSE+LA+AFGL+
Sbjct: 600 DTSHPDMKMISGMLEWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERLALAFGLI 659

Query: 753 TLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             P    IRI KNLR+C DCH+A+K IS +  R II+RD NRFHHF+ G CSCGDYW
Sbjct: 660 RTPSRGHIRILKNLRICTDCHSAIKLISKIVQRDIIIRDMNRFHHFQDGICSCGDYW 716



 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 150/455 (32%), Positives = 254/455 (55%), Gaps = 7/455 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           + + F    +I AYA  G +  A++ F+    K+  +W+ ++  Y+      ++ +LF +
Sbjct: 73  ESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAE 132

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M++ G+ P+ +T   VL+ C        G+  HG  +KTC++++ +V  GL+D+Y K   
Sbjct: 133 MRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTK--- 189

Query: 184 IFEAEYLFKMFPDGKNH--VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
             +A  + ++F +   H  + W+ MI+ Y+Q+    +A+E F  MR   V  NQFTF S+
Sbjct: 190 FGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASV 249

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           L +CA++     G QVH  +L  G + NV+V +AL+D+YAKCG LD++ +L       NE
Sbjct: 250 LQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNE 309

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           V+WN+MIVG+ + G   +ALSL+K M    ++  + TY SVL   AS   +     +HSL
Sbjct: 310 VTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSL 369

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
            +KT ++    V NALIDMYAK G++  A +VF+++ ++D ISW ++I+G + HG   EA
Sbjct: 370 SLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEA 429

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS-LSVDNSLVL 480
           LK F  M+ +   P+ +   SILSAC+   +L+ GQ      ++  G    +     +V 
Sbjct: 430 LKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVW 489

Query: 481 VYAKCGCINDANRVFDSMHTR-DVITWTALIMGCA 514
           +  + G ++ A ++ + +    +V  W AL+  C 
Sbjct: 490 LLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACV 524



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 157/330 (47%), Gaps = 11/330 (3%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D + F  N ++  YA  GRL  + KLF E P +N  TW+++I GY   G   +A  L+  
Sbjct: 275 DGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKN 334

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M     + S+ T  +VLR C+    ++ G Q H  ++KT +D +  V   L+DMYAKC  
Sbjct: 335 MLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGS 394

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I  A  +F M  + ++ ++W  MI+GYS +G   +A++ F+ M+      N+ TF SIL+
Sbjct: 395 IKNARLVFDMLSE-RDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILS 453

Query: 244 ACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           AC+     D G      ++   G E  +   + ++ +  + G LD A +L+E   ++  V
Sbjct: 454 ACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNV 513

Query: 303 S-WNSMIVGFARQGFHKEA-LSLFKKMHARDIKI-DDFTYPSVLNCFASNIDLNNAKSVH 359
             W +++        H +  L +        I   D+ T+  + N +A     N+  SV 
Sbjct: 514 KVWRALLGACV---IHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVR 570

Query: 360 SLIVKTGFE---GYKFVNNALIDMYAKQGN 386
             +   G +   G  ++ N  I  Y   G+
Sbjct: 571 KFMKNKGVKKEPGLSWIENQGIVHYFSVGD 600



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/307 (22%), Positives = 139/307 (45%), Gaps = 34/307 (11%)

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
           M D++ +S+ +LI G       +E +  FS +   G   +  V ++IL     +   E  
Sbjct: 1   MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
             +HA   K G  S+  V  +L+  YA CG +N A + FD++  +D+++WT ++   A+N
Sbjct: 61  YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120

Query: 517 GKGKEALQFYDQMLARGTKPDYITFVGLLFAC--------------------------SH 550
            + +++LQ + +M   G  P++ TF G+L AC                            
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180

Query: 551 AGLAENARWYFESMDKVYGIKPGPDH----YACMIDLLGRSGKLIEAKALLDQMVGE--- 603
            GL +    + ++ D +   +  P H    ++ MI    +S +  EA  L  QM      
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVL 240

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELE-PMNAMPYVQLSNMYSTAGKWEDAARV 662
           P+   + ++L +C    +L+LG++   ++ ++    N      L ++Y+  G+ +++ ++
Sbjct: 241 PNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKL 300

Query: 663 RKLMKSR 669
              + +R
Sbjct: 301 FMELPNR 307



 Score = 46.6 bits (109), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 41/172 (23%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           AL+D ++  G I  A  +F+ +S+RD  +WN MI+ Y                       
Sbjct: 384 ALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGY----------------------- 420

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF----- 155
                   S +GL  EA + F  MQ     P++ T  ++L  CS  GLL  G+ +     
Sbjct: 421 --------SMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMV 472

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
             Y I+ C +      T +V +  +   + +A  L +  P   N   W  ++
Sbjct: 473 QDYGIEPCMEH----YTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALL 520


>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  533 bits (1373), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 268/624 (42%), Positives = 393/624 (62%), Gaps = 5/624 (0%)

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +F   P+ +N V WT MIT ++Q G    AI+ F DM + G   ++FT+ S+L+AC  + 
Sbjct: 12  VFDKMPE-RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 70

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC---GDLDSARRLLEYSEIDNEVSWNS 306
               G Q+H  ++  G   +V V  +L+DMYAKC   G +D +R++ E     N +SW +
Sbjct: 71  LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 130

Query: 307 MIVGFARQG-FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +I  +A+ G   KEA+ LF KM +  I+ + F++ SVL    +  D    + V+S  VK 
Sbjct: 131 IITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL 190

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G      V N+LI MYA+ G ++ A   F+++ +K+++S+ +++ G A +   EEA   F
Sbjct: 191 GIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 250

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
           +++  +GI       +S+LS  A +  +  G+Q+H   LK G  S+  + N+L+ +Y++C
Sbjct: 251 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC 310

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G I  A +VF+ M  R+VI+WT++I G A++G    AL+ + +ML  GTKP+ IT+V +L
Sbjct: 311 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 370

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
            ACSH G+    + +F SM K +GI P  +HYACM+DLLGRSG L+EA   ++ M    D
Sbjct: 371 SACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMAD 430

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
           A VW+ LL ACRVHG+ ELG  AA  + E EP +   Y+ LSN++++AG+W+D  ++RK 
Sbjct: 431 ALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKS 490

Query: 666 MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFA 725
           MK R + KE GCSW+E  ++VH F   +  HP    IY ++D++   IKE GY+PD +F 
Sbjct: 491 MKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFV 550

Query: 726 LHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLR 785
           LH++EEE KE  L  HSEK+AVAFGL++  Q  PIRIFKNLRVCGDCHTA+KYIS    R
Sbjct: 551 LHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGR 610

Query: 786 HIILRDSNRFHHFKAGNCSCGDYW 809
            I++RDSNRFHH K G CSC DYW
Sbjct: 611 EIVVRDSNRFHHIKNGVCSCNDYW 634



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 149/458 (32%), Positives = 252/458 (55%), Gaps = 9/458 (1%)

Query: 86  AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL 145
           A K+F++ P +N  TW+ +I  ++  G   +A +LF  M+L GY P ++T  +VL  C+ 
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68

Query: 146 KGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC---IFEAEYLFKMFPDGKNHVA 202
            GLL  G+Q H   I+    L+  V   LVDMYAKC     + ++  +F+  P+  N ++
Sbjct: 69  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE-HNVMS 127

Query: 203 WTTMITGYSQNGYGFK-AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI 261
           WT +IT Y+Q+G   K AIE F  M    +  N F+F S+L AC  +S    G QV+   
Sbjct: 128 WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 187

Query: 262 LSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEAL 321
           +  G  +   V ++LI MYA+ G ++ AR+  +     N VS+N+++ G+A+    +EA 
Sbjct: 188 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 247

Query: 322 SLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMY 381
            LF ++    I I  FT+ S+L+  AS   +   + +H  ++K G++  + + NALI MY
Sbjct: 248 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMY 307

Query: 382 AKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVS 441
           ++ GN++ AF VFN M+D++VISWTS+ITG A HG    AL+ F  M  +G  P+ +   
Sbjct: 308 SRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYV 367

Query: 442 SILSACAELTVLEFGQQ-VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH- 499
           ++LSAC+ + ++  GQ+  ++++ + G    +     +V +  + G + +A    +SM  
Sbjct: 368 AVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 427

Query: 500 TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
             D + W  L+  C  +G  +      + +L +  +PD
Sbjct: 428 MADALVWRTLLGACRVHGNTELGRHAAEMILEQ--EPD 463



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 213/414 (51%), Gaps = 10/414 (2%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYG-LDIEAFELFWQMQLEGYRP 131
           M A  A  G + +++K+F + P  N  +W+++I  Y+  G  D EA ELF +M     RP
Sbjct: 100 MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRP 159

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
           + ++  +VL+ C        GEQ + YA+K        V   L+ MYA+   + +A   F
Sbjct: 160 NHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAF 219

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
            +  + KN V++  ++ GY++N    +A   F ++   G+  + FTF S+L+  A++ A 
Sbjct: 220 DILFE-KNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAM 278

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
             G Q+HG +L  G+++N  + +ALI MY++CG++++A ++    E  N +SW SMI GF
Sbjct: 279 GKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGF 338

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGY 370
           A+ GF   AL +F KM     K ++ TY +VL+ C    +     K  +S+  + G    
Sbjct: 339 AKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPR 398

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
                 ++D+  + G L  A    N M    D + W +L+  C  HG+ E   ++ ++M 
Sbjct: 399 MEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELG-RHAAEMI 457

Query: 430 ISGICPD---HVVVSSILSACAELT-VLEFGQQVHAV-FLKSGGCSSLSVDNSL 478
           +     D   ++++S++ ++  +   V++  + +     +K  GCS + V+N +
Sbjct: 458 LEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRV 511



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 123/217 (56%), Gaps = 13/217 (5%)

Query: 390 AFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE 449
           A+ VF+ M ++++++WT +IT  A  G   +A+  F DM +SG  PD    SS+LSAC E
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68

Query: 450 LTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC---GCINDANRVFDSMHTRDVITW 506
           L +L  G+Q+H+  ++ G    + V  SLV +YAKC   G ++D+ +VF+ M   +V++W
Sbjct: 69  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128

Query: 507 TALIMGCAQNGK-GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMD 565
           TA+I   AQ+G+  KEA++ + +M++   +P++ +F  +L AC +          +    
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS--- 185

Query: 566 KVYGIKPGPDHYAC----MIDLLGRSGKLIEAKALLD 598
             Y +K G     C    +I +  RSG++ +A+   D
Sbjct: 186 --YAVKLGIASVNCVGNSLISMYARSGRMEDARKAFD 220



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 105/178 (58%), Gaps = 1/178 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N++I+ YA SGR+ +A+K F+    KN  ++++++ GY+      EAF LF ++   G  
Sbjct: 200 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 259

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            S +T  ++L   +  G + +GEQ HG  +K  +  N  +   L+ MY++C  I  A  +
Sbjct: 260 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 319

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
           F    D +N ++WT+MITG++++G+  +A+E F  M   G + N+ T+ ++L+AC+ V
Sbjct: 320 FNEMED-RNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHV 376



 Score = 48.1 bits (113), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 35/167 (20%), Positives = 65/167 (38%), Gaps = 40/167 (23%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +S  G I+ A Q+F +M DR+  +W +MI                               
Sbjct: 307 YSRCGNIEAAFQVFNEMEDRNVISWTSMIT------------------------------ 336

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            G++ +G    A E+F +M   G +P++ T   VL  CS  G++  G++       + + 
Sbjct: 337 -GFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKH----FNSMYK 391

Query: 166 LNAFV-----VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
            +  V        +VD+  +   + EA       P   + + W T++
Sbjct: 392 EHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 438


>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  533 bits (1373), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 268/624 (42%), Positives = 393/624 (62%), Gaps = 5/624 (0%)

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +F   P+ +N V WT MIT ++Q G    AI+ F DM + G   ++FT+ S+L+AC  + 
Sbjct: 7   VFDKMPE-RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 65

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC---GDLDSARRLLEYSEIDNEVSWNS 306
               G Q+H  ++  G   +V V  +L+DMYAKC   G +D +R++ E     N +SW +
Sbjct: 66  LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 125

Query: 307 MIVGFARQG-FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +I  +A+ G   KEA+ LF KM +  I+ + F++ SVL    +  D    + V+S  VK 
Sbjct: 126 IITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKL 185

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G      V N+LI MYA+ G ++ A   F+++ +K+++S+ +++ G A +   EEA   F
Sbjct: 186 GIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 245

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
           +++  +GI       +S+LS  A +  +  G+Q+H   LK G  S+  + N+L+ +Y++C
Sbjct: 246 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC 305

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G I  A +VF+ M  R+VI+WT++I G A++G    AL+ + +ML  GTKP+ IT+V +L
Sbjct: 306 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 365

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
            ACSH G+    + +F SM K +GI P  +HYACM+DLLGRSG L+EA   ++ M    D
Sbjct: 366 SACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMAD 425

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
           A VW+ LL ACRVHG+ ELG  AA  + E EP +   Y+ LSN++++AG+W+D  ++RK 
Sbjct: 426 ALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKS 485

Query: 666 MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFA 725
           MK R + KE GCSW+E  ++VH F   +  HP    IY ++D++   IKE GY+PD +F 
Sbjct: 486 MKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFV 545

Query: 726 LHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLR 785
           LH++EEE KE  L  HSEK+AVAFGL++  Q  PIRIFKNLRVCGDCHTA+KYIS    R
Sbjct: 546 LHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGR 605

Query: 786 HIILRDSNRFHHFKAGNCSCGDYW 809
            I++RDSNRFHH K G CSC DYW
Sbjct: 606 EIVVRDSNRFHHIKNGVCSCNDYW 629



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 149/458 (32%), Positives = 252/458 (55%), Gaps = 9/458 (1%)

Query: 86  AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL 145
           A K+F++ P +N  TW+ +I  ++  G   +A +LF  M+L GY P ++T  +VL  C+ 
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 146 KGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC---IFEAEYLFKMFPDGKNHVA 202
            GLL  G+Q H   I+    L+  V   LVDMYAKC     + ++  +F+  P+  N ++
Sbjct: 64  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE-HNVMS 122

Query: 203 WTTMITGYSQNGYGFK-AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI 261
           WT +IT Y+Q+G   K AIE F  M    +  N F+F S+L AC  +S    G QV+   
Sbjct: 123 WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 182

Query: 262 LSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEAL 321
           +  G  +   V ++LI MYA+ G ++ AR+  +     N VS+N+++ G+A+    +EA 
Sbjct: 183 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 242

Query: 322 SLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMY 381
            LF ++    I I  FT+ S+L+  AS   +   + +H  ++K G++  + + NALI MY
Sbjct: 243 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMY 302

Query: 382 AKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVS 441
           ++ GN++ AF VFN M+D++VISWTS+ITG A HG    AL+ F  M  +G  P+ +   
Sbjct: 303 SRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYV 362

Query: 442 SILSACAELTVLEFGQQ-VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH- 499
           ++LSAC+ + ++  GQ+  ++++ + G    +     +V +  + G + +A    +SM  
Sbjct: 363 AVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 422

Query: 500 TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
             D + W  L+  C  +G  +      + +L +  +PD
Sbjct: 423 MADALVWRTLLGACRVHGNTELGRHAAEMILEQ--EPD 458



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 213/414 (51%), Gaps = 10/414 (2%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYG-LDIEAFELFWQMQLEGYRP 131
           M A  A  G + +++K+F + P  N  +W+++I  Y+  G  D EA ELF +M     RP
Sbjct: 95  MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRP 154

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
           + ++  +VL+ C        GEQ + YA+K        V   L+ MYA+   + +A   F
Sbjct: 155 NHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAF 214

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
            +  + KN V++  ++ GY++N    +A   F ++   G+  + FTF S+L+  A++ A 
Sbjct: 215 DILFE-KNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAM 273

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
             G Q+HG +L  G+++N  + +ALI MY++CG++++A ++    E  N +SW SMI GF
Sbjct: 274 GKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGF 333

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGY 370
           A+ GF   AL +F KM     K ++ TY +VL+ C    +     K  +S+  + G    
Sbjct: 334 AKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPR 393

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
                 ++D+  + G L  A    N M    D + W +L+  C  HG+ E   ++ ++M 
Sbjct: 394 MEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELG-RHAAEMI 452

Query: 430 ISGICPD---HVVVSSILSACAELT-VLEFGQQVHAV-FLKSGGCSSLSVDNSL 478
           +     D   ++++S++ ++  +   V++  + +     +K  GCS + V+N +
Sbjct: 453 LEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRV 506



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 123/217 (56%), Gaps = 13/217 (5%)

Query: 390 AFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE 449
           A+ VF+ M ++++++WT +IT  A  G   +A+  F DM +SG  PD    SS+LSAC E
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 450 LTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC---GCINDANRVFDSMHTRDVITW 506
           L +L  G+Q+H+  ++ G    + V  SLV +YAKC   G ++D+ +VF+ M   +V++W
Sbjct: 64  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123

Query: 507 TALIMGCAQNGK-GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMD 565
           TA+I   AQ+G+  KEA++ + +M++   +P++ +F  +L AC +          +    
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS--- 180

Query: 566 KVYGIKPGPDHYAC----MIDLLGRSGKLIEAKALLD 598
             Y +K G     C    +I +  RSG++ +A+   D
Sbjct: 181 --YAVKLGIASVNCVGNSLISMYARSGRMEDARKAFD 215



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 105/178 (58%), Gaps = 1/178 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N++I+ YA SGR+ +A+K F+    KN  ++++++ GY+      EAF LF ++   G  
Sbjct: 195 NSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIG 254

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            S +T  ++L   +  G + +GEQ HG  +K  +  N  +   L+ MY++C  I  A  +
Sbjct: 255 ISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQV 314

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
           F    D +N ++WT+MITG++++G+  +A+E F  M   G + N+ T+ ++L+AC+ V
Sbjct: 315 FNEMED-RNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHV 371



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 35/163 (21%), Positives = 64/163 (39%), Gaps = 32/163 (19%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +S  G I+ A Q+F +M DR+  +W +MI                               
Sbjct: 302 YSRCGNIEAAFQVFNEMEDRNVISWTSMIT------------------------------ 331

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ-FHGYAIKTCF 164
            G++ +G    A E+F +M   G +P++ T   VL  CS  G++  G++ F+    +   
Sbjct: 332 -GFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGI 390

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
                    +VD+  +   + EA       P   + + W T++
Sbjct: 391 VPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 433


>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  533 bits (1372), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 281/740 (37%), Positives = 426/740 (57%), Gaps = 2/740 (0%)

Query: 71   NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
            N +I  Y+  G +  A+++F++   ++  +W +++ GY++ G  +E  ELF +M+L   R
Sbjct: 267  NGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVR 326

Query: 131  PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
             ++ +  +     +    L++G++ HG A++   D +  V T L+ MYAKC    +A+ L
Sbjct: 327  INKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQL 386

Query: 191  FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
            F     G++ VAW+ +I    Q GY  +A+  F++M+ + ++ N+ T  SIL ACA +S 
Sbjct: 387  FWGL-QGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSL 445

Query: 251  RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
               G  +H   + +  ++++   +AL+ MYAKCG   +A          + V+WNS+I G
Sbjct: 446  LKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLING 505

Query: 311  FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
            +A+ G    A+ +F K+    I  D  T   V+   A   DL+    +H LIVK GFE  
Sbjct: 506  YAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESD 565

Query: 371  KFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
              V NALIDMYAK G+L  A  +FN     KD ++W  +I     +G  +EA+  F  MR
Sbjct: 566  CHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMR 625

Query: 430  ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
            +    P+ V   S+L A A L     G   HA  ++ G  S+  V NSL+ +YAKCG + 
Sbjct: 626  LENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLX 685

Query: 490  DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
             + ++F+ M  +D ++W A++ G A +G G  A+  +  M     + D ++FV +L AC 
Sbjct: 686  YSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACR 745

Query: 550  HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
            H GL E  R  F SM   Y IKP  +HYACM+DLLGR+G   E    +  M  EPDA VW
Sbjct: 746  HXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVW 805

Query: 610  KALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
             ALL +CR+H +++LGE A ++L +LEP N   +V LS++Y+ +G+W DA + R  M   
Sbjct: 806  GALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDL 865

Query: 670  GIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNV 729
            G++K PGCSWVE  ++VH F   D+ HP    ++   + ++  +++ GYVPD +  L NV
Sbjct: 866  GLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNV 925

Query: 730  EEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIIL 789
            EEE KE+ L  HSE+LA+ F LL  P G+ I+I KNLRVC DCHT  K+IS +  R II+
Sbjct: 926  EEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTKFISKITTRRIIV 985

Query: 790  RDSNRFHHFKAGNCSCGDYW 809
            RD+ RFHHF+ G CSC DYW
Sbjct: 986  RDATRFHHFEDGICSCNDYW 1005



 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 181/581 (31%), Positives = 296/581 (50%), Gaps = 17/581 (2%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS 109
           GEID  G       +RD F    ++  Y+  G L+ A+++F++ P ++   W+++I G S
Sbjct: 153 GEIDRRGL------ERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLS 206

Query: 110 NYGLDIEAFELFWQMQLEGYRPSQYTLDNVLR-LCSLKGLLQRGEQFHGYAIKTCFDLNA 168
                 EA + F  MQL G  PS  +L N+   +C L   ++     HGY  +   D ++
Sbjct: 207 QSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSN-IELCRSIHGYVFRR--DFSS 263

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
            V  GL+D+Y+KC  +  A  +F    D ++ V+W TM+ GY+ NG   + +E F  M++
Sbjct: 264 AVSNGLIDLYSKCGDVDVARRVFDQMVD-QDDVSWGTMMAGYAHNGCFVEVLELFDKMKL 322

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
             V  N+ +  S   A A     + G ++HGC L    ++++ V + L+ MYAKCG+ + 
Sbjct: 323 GNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEK 382

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
           A++L    +  + V+W+++I    + G+ +EALSLF++M  + +K +  T  S+L   A 
Sbjct: 383 AKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACAD 442

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
              L   KS+H   VK   +       AL+ MYAK G    A   FN M  +D+++W SL
Sbjct: 443 LSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSL 502

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
           I G A  G    A+  F  +R+S I PD   +  ++ ACA L  L+ G  +H + +K G 
Sbjct: 503 INGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGF 562

Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMGCAQNGKGKEALQFYD 527
            S   V N+L+ +YAKCG +  A  +F+    T+D +TW  +I    QNG  KEA+  + 
Sbjct: 563 ESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFH 622

Query: 528 QMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRS 587
           QM      P+ +TFV +L A ++         +   + ++ G          +ID+  + 
Sbjct: 623 QMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQM-GFLSNTLVGNSLIDMYAKC 681

Query: 588 GKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
           G+L  ++ L ++M    D   W A+LS   VHG    G+RA
Sbjct: 682 GQLXYSEKLFNEM-DHKDTVSWNAMLSGYAVHGH---GDRA 718



 Score =  278 bits (712), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 164/530 (30%), Positives = 273/530 (51%), Gaps = 4/530 (0%)

Query: 86  AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL 145
           A+ +F+ TP  +   W+S+I  Y+      EA E+++ M  +G  P +YT   VL+ C+ 
Sbjct: 82  ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTG 141

Query: 146 KGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTT 205
              LQ G  FHG   +   + + F+  GLVDMY+K   +  A  +F   P  ++ VAW  
Sbjct: 142 ALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPK-RDVVAWNA 200

Query: 206 MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
           MI G SQ+    +A++ FR M++ GVE +  +  ++      +S  +    +HG +    
Sbjct: 201 MIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRD 260

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
           F + V   + LID+Y+KCGD+D ARR+ +     ++VSW +M+ G+A  G   E L LF 
Sbjct: 261 FSSAV--SNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFD 318

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           KM   +++I+  +  S     A  IDL   K +H   ++   +    V   L+ MYAK G
Sbjct: 319 KMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCG 378

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
             + A  +F  +Q +D+++W+++I      G  EEAL  F +M+   + P+ V + SIL 
Sbjct: 379 ETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILP 438

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
           ACA+L++L+ G+ +H   +K+   S LS   +LV +YAKCG    A   F+ M +RD++T
Sbjct: 439 ACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVT 498

Query: 506 WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMD 565
           W +LI G AQ G    A+  + ++      PD  T VG++ AC+     +        + 
Sbjct: 499 WNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIV 558

Query: 566 KVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
           K+ G +        +ID+  + G L  A+ L ++     D   W  +++A
Sbjct: 559 KL-GFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAA 607



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 158/522 (30%), Positives = 256/522 (49%), Gaps = 18/522 (3%)

Query: 44  VDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSS 103
           +D     EI   G   ++  D D      ++  YA  G   +AK+LF     ++   WS+
Sbjct: 343 IDLEKGKEIH--GCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSA 400

Query: 104 LIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC 163
           +I      G   EA  LF +MQ +  +P++ TL ++L  C+   LL+ G+  H + +K  
Sbjct: 401 IIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKAD 460

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
            D +    T LV MYAKC     A   F      ++ V W ++I GY+Q G  + AI+ F
Sbjct: 461 MDSDLSTGTALVSMYAKCGFFTAALTTFNRM-SSRDIVTWNSLINGYAQIGDPYNAIDMF 519

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
             +R+  +  +  T   ++ ACA ++  D G  +HG I+  GFE++ +V++ALIDMYAKC
Sbjct: 520 YKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKC 579

Query: 284 GDLDSARRLLEYSEI-DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
           G L SA  L   ++   +EV+WN +I  + + G  KEA+S F +M   +   +  T+ SV
Sbjct: 580 GSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSV 639

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV 402
           L   A         + H+ I++ GF     V N+LIDMYAK G L  +  +FN M  KD 
Sbjct: 640 LPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDT 699

Query: 403 ISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV-HA 461
           +SW ++++G A HG  + A+  FS M+ S +  D V   S+LSAC    ++E G+++ H+
Sbjct: 700 VSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHS 759

Query: 462 VFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGK-- 518
           +  K      L     +V +  + G  ++       M    D   W AL+  C  +    
Sbjct: 760 MSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVK 819

Query: 519 -GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW 559
            G+ AL    ++  R   P +   +  ++       A++ RW
Sbjct: 820 LGEVALDHLVKLEPR--NPAHFVVLSSIY-------AQSGRW 852



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 166/317 (52%), Gaps = 6/317 (1%)

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
           +N   +P +L++C  ++      Q+H  I+ SGF+ +  + + LI++Y+     D AR +
Sbjct: 30  TNYLHYPRLLSSCKHLNPL---LQIHAQIIVSGFKHHHSI-THLINLYSLFHKCDLARSV 85

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
            + +   + + WNSMI  + R   + EAL ++  M  + ++ D +T+  VL      ++L
Sbjct: 86  FDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNL 145

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
                 H  I + G E   F+   L+DMY+K G+L  A  VF+ M  +DV++W ++I G 
Sbjct: 146 QEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGL 205

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
           +      EA+ +F  M++ G+ P  V + ++     +L+ +E  + +H    +    S++
Sbjct: 206 SQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAV 265

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
           S  N L+ +Y+KCG ++ A RVFD M  +D ++W  ++ G A NG   E L+ +D+M   
Sbjct: 266 S--NGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLG 323

Query: 533 GTKPDYITFVGLLFACS 549
             + + ++ V    A +
Sbjct: 324 NVRINKVSAVSAFLAAA 340


>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 837

 Score =  533 bits (1372), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 277/744 (37%), Positives = 421/744 (56%), Gaps = 1/744 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N ++  Y   G L  A++LF+  P +N  ++ +L+  ++  G    A  LF +++
Sbjct: 95  DLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLR 154

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            EG+  +Q+ L  +L+L             H  A K   D NAFV +GL+D Y+ C  + 
Sbjct: 155 WEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVS 214

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +AE++F      K+ V WT M++ YS+N     A   F  MRV G + N F   S+L A 
Sbjct: 215 DAEHVFNGIVR-KDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAA 273

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
             + +   G  +HGC + +  +   +V  AL+DMYAKCGD+  AR   E    D+ +  +
Sbjct: 274 VCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLS 333

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
            MI  +A+   +++A  LF ++    +  ++++  SVL    + + L+  K +H+  +K 
Sbjct: 334 FMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKI 393

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G E   FV NAL+D YAK  ++D +  +F+ ++D + +SW +++ G +  G  EEAL  F
Sbjct: 394 GHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVF 453

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
            +M+ + +    V  SS+L ACA    +    Q+H    KS   +   + NSL+  YAKC
Sbjct: 454 CEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKC 513

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G I DA +VF  +  RD+I+W A+I G A +G+  +AL+ +D+M     + + ITFV LL
Sbjct: 514 GYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALL 573

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
             CS  GL  +    F+SM   +GIKP  +HY C++ LLGR+G+L +A   +  +   P 
Sbjct: 574 SVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPS 633

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
           A VW+ALLS+C +H ++ LG  +A  + E+EP +   YV LSNMY+ AG  +  A +RK 
Sbjct: 634 AMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKS 693

Query: 666 MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFA 725
           M++ G+RK PG SWVE   ++H F      HP    I + ++ + L     GY+PD+N  
Sbjct: 694 MRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVV 753

Query: 726 LHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLR 785
           LH+V++E K   L  HSE+LA+A+GL+  P G PIRI KNLR C DCHTA   IS +  R
Sbjct: 754 LHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKR 813

Query: 786 HIILRDSNRFHHFKAGNCSCGDYW 809
            II+RD NRFHHF+ G CSCGDYW
Sbjct: 814 EIIVRDINRFHHFEDGKCSCGDYW 837



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 155/513 (30%), Positives = 264/513 (51%), Gaps = 5/513 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D + F  + +I AY+    + +A+ +FN    K+   W++++  YS       AF +F +
Sbjct: 194 DHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSK 253

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M++ G +P+ + L +VL+       +  G+  HG AIKT  D    V   L+DMYAKC  
Sbjct: 254 MRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGD 313

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I +A   F+M P   + +  + MI+ Y+Q+    +A E F  +    V  N+++  S+L 
Sbjct: 314 IKDARLAFEMIP-YDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQ 372

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC  +   DFG Q+H   +  G E++++V +AL+D YAKC D+DS+ ++       NEVS
Sbjct: 373 ACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVS 432

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN+++VGF++ G  +EALS+F +M A  +     TY SVL   AS   + +A  +H  I 
Sbjct: 433 WNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIE 492

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K+ F     + N+LID YAK G +  A  VF  + ++D+ISW ++I+G A HG   +AL+
Sbjct: 493 KSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALE 552

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV-HAVFLKSGGCSSLSVDNSLVLVY 482
            F  M  S +  + +   ++LS C+   ++  G  +  ++ +  G   S+     +V + 
Sbjct: 553 LFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLL 612

Query: 483 AKCGCINDANR-VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
            + G +NDA + + D       + W AL+  C  + K     +F  + +      D  T+
Sbjct: 613 GRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIH-KNVALGRFSAEKILEIEPQDETTY 671

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
           V L    + AG  +      +SM  + G++  P
Sbjct: 672 VLLSNMYAAAGSLDQVALLRKSMRNI-GVRKVP 703



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 210/401 (52%), Gaps = 9/401 (2%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G   + ++D +      ++  YA  G +++A+  F   P+ +    S +I  Y+    + 
Sbjct: 287 GCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNE 346

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           +AFELF ++      P++Y+L +VL+ C+    L  G+Q H +AIK   + + FV   L+
Sbjct: 347 QAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALM 406

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           D YAKC  +  +  +F    D  N V+W T++ G+SQ+G G +A+  F +M+   +   Q
Sbjct: 407 DFYAKCNDMDSSLKIFSSLRDA-NEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQ 465

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            T+ S+L ACA+ ++     Q+H  I  S F  +  + ++LID YAKCG +  A ++ ++
Sbjct: 466 VTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQH 525

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               + +SWN++I G+A  G   +AL LF +M+  +++ +D T+ ++L+  +S   +N+ 
Sbjct: 526 LMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHG 585

Query: 356 KSV-HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM-VFNLMQDKDVISWTSLITGCA 413
            S+  S+ +  G +        ++ +  + G L+ A   + ++      + W +L++ C 
Sbjct: 586 LSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCI 645

Query: 414 YHGSYEEALKYFSDMRISGICPD----HVVVSSILSACAEL 450
            H +   AL  FS  +I  I P     +V++S++ +A   L
Sbjct: 646 IHKNV--ALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSL 684



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 6/125 (4%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           +  +L+D ++  G I +A ++F+ + +RD  +WN +I+ YA  G+  +A +LF+     N
Sbjct: 502 IGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSN 561

Query: 98  F----FTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRG 152
                 T+ +L+   S+ GL      LF  M+++ G +PS      ++RL    G L   
Sbjct: 562 VESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDA 621

Query: 153 EQFHG 157
            QF G
Sbjct: 622 LQFIG 626



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 30/217 (13%)

Query: 416 GSYEEALKYFSDMRIS-GICP-----DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
            +Y  AL++  D   S  I P     D    +  L  C        G+ VH   ++ GG 
Sbjct: 32  AAYAAALQWLEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGV 91

Query: 470 SSLSV--DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYD 527
             L +   N L+ +Y K G +  A R+FD M  R+++++  L+   AQ G  + A   + 
Sbjct: 92  GRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFR 151

Query: 528 QMLARGTKPD---YITFVGLLFACSHAGLA---ENARWYFESMDKVYGIKPGPDHYA--- 578
           ++   G + +     T + L  A   AGLA    +  W           K G DH A   
Sbjct: 152 RLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAW-----------KLGHDHNAFVG 200

Query: 579 -CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
             +ID       + +A+ + + +V   DA VW A++S
Sbjct: 201 SGLIDAYSLCSLVSDAEHVFNGIV-RKDAVVWTAMVS 236


>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 878

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 297/775 (38%), Positives = 440/775 (56%), Gaps = 36/775 (4%)

Query: 71  NTMIAAYANSGRLREAKKLFNET--PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG 128
           N ++ AYA  G L  A  LF  T    ++  +++SLI     +     A +    M  EG
Sbjct: 104 NALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLAEG 163

Query: 129 -YRPSQYTLDNVLRLCS-LKGLLQR--GEQFHGYAIKTCF---DLNAFVVTGLVDMYAKC 181
            +  S +TL +VL  CS L G   R  G + H +A+K  F       F    L+ MYA+ 
Sbjct: 164 RHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARL 223

Query: 182 KCIFEAEYLFKMF-----PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
             + +A+ LF+       P G + V W TMI+   Q G   +A+E   DM   GV  +  
Sbjct: 224 GLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGV 283

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSG-FEANVYVQSALIDMYAKCGDLDSARRLLE- 294
           TF S L AC+ +     G ++H  +L      AN +V SAL+DMYA    + SARR+ + 
Sbjct: 284 TFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDM 343

Query: 295 YSEIDNEVS-WNSMIVGFARQGFHKEALSLFKKMHAR-DIKIDDFTYPSVLNCFASNIDL 352
             E   ++  WN+MI G+A+ G  +EAL LF +M A       + T   VL   A +   
Sbjct: 344 VPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGF 403

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
              +++H  +VK G  G +FV NAL+DMYA+ G +D A  +F ++  +DV+SW +LITGC
Sbjct: 404 AGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGC 463

Query: 413 AYHGSYEEALKYFSDMRISGI----------------CPDHVVVSSILSACAELTVLEFG 456
              G   EA +  ++M++                    P+++ + ++L  CA L     G
Sbjct: 464 VVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARG 523

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
           +++H   ++    S ++V ++LV +YAKCGC+  +  VFD +  R+VITW  LIM    +
Sbjct: 524 KEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMH 583

Query: 517 GKGKEALQFYDQMLARG-TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
           G G EA+  +D+M A G   P+ +TF+  L ACSH+GL +     F  M++ +G+KP PD
Sbjct: 584 GLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPD 643

Query: 576 HYACMIDLLGRSGKLIEAKALLDQM-VGEPDATVWKALLSACRVHGDLELGERAANNLFE 634
            +AC++D+LGR+G+L EA +++  M  GE   + W +LL ACR+H ++ELGE AA  LFE
Sbjct: 644 LHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRNVELGEVAAERLFE 703

Query: 635 LEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDR 694
           LEP  A  YV L N+YS AG W+ +  VR  M+ +G+ KEPGCSW+E +  +H F++ + 
Sbjct: 704 LEPGEASHYVLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEPGCSWIELDGAIHRFMAGES 763

Query: 695 GHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTL 754
            HP   ++++ +D +   ++  GY PD +  LH+V+E+ K   L YHSEKLA+AFGLL  
Sbjct: 764 SHPASAEVHAHMDALWERMRREGYAPDTSCVLHDVDEDEKAAMLRYHSEKLAIAFGLLRA 823

Query: 755 PQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           P GA IR+ KNLRVC DCH A K++S +  R I+LRD  RFHHF+ G+CSCGDYW
Sbjct: 824 PPGAAIRVAKNLRVCNDCHEAAKFMSKMVGRDIVLRDVRRFHHFRDGSCSCGDYW 878



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 193/413 (46%), Gaps = 33/413 (7%)

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGF--EANVYVQSALIDMYAKCG--DLDSA 289
           + F  P  + + AA+        +H   L        +  V +AL+  YA+CG  D   A
Sbjct: 62  DHFALPPAIKSAAALRDARAARSLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAALA 121

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK-IDDFTYPSVL---NC 345
                 +E+ + VS+NS+I         + AL   + M A     +  FT  SVL   + 
Sbjct: 122 LFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSH 181

Query: 346 FASNIDLNNAKSVHSLIVKTGF--EGY-KFVNNALIDMYAKQGNLDCAFMVFNLMQDK-- 400
              +      +  H+  +K GF  EG  +F  NAL+ MYA+ G +D A  +F        
Sbjct: 182 LPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFS 241

Query: 401 ----DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
               DV++W ++I+     G   EA++   DM   G+ PD V  +S L AC+ L +L  G
Sbjct: 242 PGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALG 301

Query: 457 QQVHAVFLKSGGCSSLS-VDNSLVLVYAKCGCINDANRVFDSM--HTRDVITWTALIMGC 513
           +++HAV LK    ++ S V ++LV +YA    +  A RVFD +   +R +  W A+I G 
Sbjct: 302 REMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGY 361

Query: 514 AQNGKGKEALQFYDQMLAR-GTKPDYITFVGLLFACSHA-GLAENARWYFESMDKVYGIK 571
           AQ G  +EAL+ + +M A  G  P   T  G+L AC+ + G A       E+M   Y +K
Sbjct: 362 AQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGK-----EAMHG-YVVK 415

Query: 572 PG--PDHYA--CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
            G   + +    ++D+  R G++  A+ +   M+   D   W  L++ C V G
Sbjct: 416 RGMAGNRFVQNALMDMYARLGEMDVARRIF-AMIDPRDVVSWNTLITGCVVQG 467



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 128/261 (49%), Gaps = 21/261 (8%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL- 126
           F  N ++  YA  G +  A+++F     ++  +W++LI G    G   EAF+L  +MQL 
Sbjct: 423 FVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLP 482

Query: 127 -------------EGYR--PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV 171
                        E +R  P+  TL  +L  C+      RG++ HGYA++   + +  V 
Sbjct: 483 SPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVG 542

Query: 172 TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG- 230
           + LVDMYAKC C+  +  +F   P  +N + W  +I  Y  +G G +A+  F +M   G 
Sbjct: 543 SALVDMYAKCGCLAASRAVFDRLPR-RNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGE 601

Query: 231 VESNQFTFPSILTACAAVSARDFGAQV-HGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
              N+ TF + L AC+     D G ++ HG     G +    + + ++D+  + G LD A
Sbjct: 602 ATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEA 661

Query: 290 RRLLEYSEI-DNEVS-WNSMI 308
             ++   E  + +VS W+S++
Sbjct: 662 YSIITSMEPGEQQVSAWSSLL 682



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 134/304 (44%), Gaps = 28/304 (9%)

Query: 333 KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF--EGYKFVNNALIDMYAKQG--NLD 388
           ++D F  P  +   A+  D   A+S+H+  ++          V NAL+  YA+ G  +  
Sbjct: 60  QLDHFALPPAIKSAAALRDARAARSLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAA 119

Query: 389 CAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVS----SIL 444
            A       + +D +S+ SLI+       +E AL    DM   G    H V S    S+L
Sbjct: 120 LALFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLAEG---RHDVSSFTLVSVL 176

Query: 445 SACAELT---VLEFGQQVHAVFLKSG----GCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
            AC+ L        G++ HA  LK G    G       N+L+ +YA+ G ++DA  +F +
Sbjct: 177 LACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPF-NALLSMYARLGLVDDAQSLFRT 235

Query: 498 MHTR------DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
                     DV+TW  +I    Q G+  EA++    M++ G +PD +TF   L ACS  
Sbjct: 236 TAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRL 295

Query: 552 GLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV--W 609
            +    R     + K   +       + ++D+   + K+  A+ + D MV EP   +  W
Sbjct: 296 EMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFD-MVPEPSRQLGMW 354

Query: 610 KALL 613
            A++
Sbjct: 355 NAMI 358



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 102/235 (43%), Gaps = 29/235 (12%)

Query: 17  SKIIGPARYTHNVGNSVKPA--SDL--NRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWN 71
           + +  PAR     G +V+ A  SD+    ALVD ++  G +  +  +F+++  R+  TWN
Sbjct: 515 AALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWN 574

Query: 72  TMIAAYANSGRLREAKKLFNE-------TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
            +I AY   G   EA  LF+E       TP  N  T+ + +   S+ GL     ELF  M
Sbjct: 575 VLIMAYGMHGLGDEAVALFDEMAAGGEATP--NEVTFIAALAACSHSGLVDRGLELFHGM 632

Query: 125 QLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           + + G +P+       L  C +  L + G     Y+I T  +     V+    +   C+ 
Sbjct: 633 ERDHGVKPTPD-----LHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRL 687

Query: 184 -------IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV 231
                     AE LF++ P   +H  +  +   YS  G   K++     MR +GV
Sbjct: 688 HRNVELGEVAAERLFELEPGEASH--YVLLCNIYSAAGMWDKSVAVRVRMRRQGV 740


>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g18750, chloroplastic; Flags: Precursor
 gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
 gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
 gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 285/737 (38%), Positives = 424/737 (57%), Gaps = 8/737 (1%)

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
           Y N G L+EA ++F+E   +    W+ L+   +  G    +  LF +M   G     YT 
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198

Query: 137 DNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD 196
             V +  S    +  GEQ HG+ +K+ F     V   LV  Y K + +  A  +F    +
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE 258

Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
            ++ ++W ++I GY  NG   K +  F  M V G+E +  T  S+   CA       G  
Sbjct: 259 -RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRA 317

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           VH   + + F       + L+DMY+KCGDLDSA+ +       + VS+ SMI G+AR+G 
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
             EA+ LF++M    I  D +T  +VLNC A    L+  K VH  I +       FV+NA
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNA 437

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS----DMRISG 432
           L+DMYAK G++  A +VF+ M+ KD+ISW ++I G + +    EAL  F+    + R S 
Sbjct: 438 LMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFS- 496

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
             PD   V+ +L ACA L+  + G+++H   +++G  S   V NSLV +YAKCG +  A+
Sbjct: 497 --PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 554

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
            +FD + ++D+++WT +I G   +G GKEA+  ++QM   G + D I+FV LL+ACSH+G
Sbjct: 555 MLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSG 614

Query: 553 LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
           L +    +F  M     I+P  +HYAC++D+L R+G LI+A   ++ M   PDAT+W AL
Sbjct: 615 LVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGAL 674

Query: 613 LSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIR 672
           L  CR+H D++L E+ A  +FELEP N   YV ++N+Y+ A KWE   R+RK +  RG+R
Sbjct: 675 LCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLR 734

Query: 673 KEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEE 732
           K PGCSW+E   +V+IF++ D  +P   +I + + ++   + E GY P   +AL + EE 
Sbjct: 735 KNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEM 794

Query: 733 GKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDS 792
            KE  L  HSEKLA+A G+++   G  IR+ KNLRVCGDCH   K++S +  R I+LRDS
Sbjct: 795 EKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDS 854

Query: 793 NRFHHFKAGNCSCGDYW 809
           NRFH FK G+CSC  +W
Sbjct: 855 NRFHQFKDGHCSCRGFW 871



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 137/447 (30%), Positives = 239/447 (53%), Gaps = 6/447 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N+++A Y  + R+  A+K+F+E   ++  +W+S+I GY + GL  +   +F QM + G  
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
               T+ +V   C+   L+  G   H   +K CF         L+DMY+KC  +  A+ +
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 353

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F+   D ++ V++T+MI GY++ G   +A++ F +M  EG+  + +T  ++L  CA    
Sbjct: 354 FREMSD-RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL 412

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            D G +VH  I  +    +++V +AL+DMYAKCG +  A  +     + + +SWN++I G
Sbjct: 413 LDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGG 472

Query: 311 FARQGFHKEALSLFK-KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           +++  +  EALSLF   +  +    D+ T   VL   AS    +  + +H  I++ G+  
Sbjct: 473 YSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS 532

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
            + V N+L+DMYAK G L  A M+F+ +  KD++SWT +I G   HG  +EA+  F+ MR
Sbjct: 533 DRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMR 592

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLVLVYAKCGC 487
            +GI  D +   S+L AC+   +++ G +   +          +V++   +V + A+ G 
Sbjct: 593 QAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP-TVEHYACIVDMLARTGD 651

Query: 488 INDANRVFDSMHT-RDVITWTALIMGC 513
           +  A R  ++M    D   W AL+ GC
Sbjct: 652 LIKAYRFIENMPIPPDATIWGALLCGC 678



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 150/493 (30%), Positives = 256/493 (51%), Gaps = 16/493 (3%)

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
           TL +VL+LC+    L+ G++   +     F +++ + + L  MY  C  + EA  +F   
Sbjct: 96  TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
              K  + W  ++   +++G    +I  F+ M   GVE + +TF  +  + +++ +   G
Sbjct: 156 KIEK-ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGG 214

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
            Q+HG IL SGF     V ++L+  Y K   +DSAR++ +     + +SWNS+I G+   
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
           G  ++ LS+F +M    I+ID  T  SV    A +  ++  ++VHS+ VK  F       
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 334

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           N L+DMY+K G+LD A  VF  M D+ V+S+TS+I G A  G   EA+K F +M   GI 
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           PD   V+++L+ CA   +L+ G++VH    ++     + V N+L+ +YAKCG + +A  V
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML-ARGTKPDYITFVGLLFACSHAGL 553
           F  M  +D+I+W  +I G ++N    EAL  ++ +L  +   PD  T   +L AC+    
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 514

Query: 554 AENARWYFESMDKVYG--IKPG---PDHYA-CMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
            +  R       +++G  ++ G     H A  ++D+  + G L+ A  L D  +   D  
Sbjct: 515 FDKGR-------EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDD-IASKDLV 566

Query: 608 VWKALLSACRVHG 620
            W  +++   +HG
Sbjct: 567 SWTVMIAGYGMHG 579



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/362 (33%), Positives = 192/362 (53%), Gaps = 32/362 (8%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           NT++  Y+  G L  AK +F E   ++  +++S+I GY+  GL  EA +LF +M+ EG  
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  YT+  VL  C+   LL  G++ H +  +     + FV   L+DMYAKC  + EAE +
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACAAVS 249
           F      K+ ++W T+I GYS+N Y  +A+  F  +  E     ++ T   +L ACA++S
Sbjct: 455 FSEMR-VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLS 513

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
           A D G ++HG I+ +G+ ++ +V ++L+DMYAKCG L  A  L +     + VSW  MI 
Sbjct: 514 AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIA 573

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           G+   GF KEA++LF +M    I+ D+ ++ S+L   +           HS +V    EG
Sbjct: 574 GYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACS-----------HSGLVD---EG 619

Query: 370 YKFVN---------------NALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCA 413
           ++F N                 ++DM A+ G+L  A+  + N+    D   W +L+ GC 
Sbjct: 620 WRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCR 679

Query: 414 YH 415
            H
Sbjct: 680 IH 681



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 138/270 (51%), Gaps = 16/270 (5%)

Query: 52  IDEAGQLFEKMSDRDG----FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYG 107
           +DE  ++ E + + D     F  N ++  YA  G ++EA+ +F+E   K+  +W+++I G
Sbjct: 413 LDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGG 472

Query: 108 YSNYGLDIEAFELF-WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDL 166
           YS      EA  LF   ++ + + P + T+  VL  C+      +G + HGY ++  +  
Sbjct: 473 YSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS 532

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
           +  V   LVDMYAKC  +  A  LF      K+ V+WT MI GY  +G+G +AI  F  M
Sbjct: 533 DRHVANSLVDMYAKCGALLLAHMLFDDIA-SKDLVSWTVMIAGYGMHGFGKEAIALFNQM 591

Query: 227 RVEGVESNQFTFPSILTACAAVSARD-----FGAQVHGCILSSGFEANVYVQSALIDMYA 281
           R  G+E+++ +F S+L AC+     D     F    H C +    E  V   + ++DM A
Sbjct: 592 RQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI----EPTVEHYACIVDMLA 647

Query: 282 KCGDLDSARRLLEYSEIDNEVS-WNSMIVG 310
           + GDL  A R +E   I  + + W +++ G
Sbjct: 648 RTGDLIKAYRFIENMPIPPDATIWGALLCG 677



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 159/382 (41%), Gaps = 54/382 (14%)

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
           ID  T  SVL   A +  L + K V + I   GF     + + L  MY   G+L  A  V
Sbjct: 92  IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           F+ ++ +  + W  L+   A  G +  ++  F  M  SG+  D    S +  + + L  +
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211

Query: 454 EFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC 513
             G+Q+H   LKSG     SV NSLV  Y K   ++ A +VFD M  RDVI+W ++I G 
Sbjct: 212 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271

Query: 514 AQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC------------------------- 548
             NG  ++ L  + QML  G + D  T V +   C                         
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 331

Query: 549 ----------SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLD 598
                     S  G  ++A+  F  M     +      Y  MI    R G   EA  L +
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVS-----YTSMIAGYAREGLAGEAVKLFE 386

Query: 599 QMVGE---PDATVWKALLSACRVHGDLELGERA-----ANNL-FELEPMNAMPYVQLSNM 649
           +M  E   PD     A+L+ C  +  L+ G+R       N+L F++   NA     L +M
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNA-----LMDM 441

Query: 650 YSTAGKWEDAARVRKLMKSRGI 671
           Y+  G  ++A  V   M+ + I
Sbjct: 442 YAKCGSMQEAELVFSEMRVKDI 463



 Score = 41.2 bits (95), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 64/170 (37%), Gaps = 33/170 (19%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           +LVD ++  G +  A  LF+ ++ +D  +W  MIA Y   G  +EA  LFN         
Sbjct: 539 SLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFN--------- 589

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
                                 QM+  G    + +  ++L  CS  GL+  G +F     
Sbjct: 590 ----------------------QMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 627

Query: 161 KTC-FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
             C  +        +VDM A+   + +A    +  P   +   W  ++ G
Sbjct: 628 HECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCG 677


>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 870

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 278/745 (37%), Positives = 424/745 (56%), Gaps = 3/745 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETP-FKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           D      ++  Y   G L  A+++F+E P   +   W++L+ GY+  G   E   LF +M
Sbjct: 128 DNVLGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKM 187

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
              G RP  YT+  VL+  +  G ++ GE  HG   K  F     V   L+  YAK    
Sbjct: 188 HCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRT 247

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            +A  +F   P  ++ ++W +MI+G + NG   KAIE F  M +EG E +  T  S+L A
Sbjct: 248 KDAILVFDGMPH-RDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPA 306

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           CA +     G  VHG  + +GF +   + + L+DMY+ C D  S  ++       N VSW
Sbjct: 307 CAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSW 366

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
            +MI  + R G + +   LF++M     + D F   S L+ FA N  L + KSVH   ++
Sbjct: 367 TAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIR 426

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            G E    V NAL++MY K GN++ A ++F+ +  KD+ISW +LI G + +    EA   
Sbjct: 427 NGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSL 486

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           F++M +  + P+ V ++ IL A A L+ LE G+++HA  L+ G      V N+L+ +Y K
Sbjct: 487 FTEMLLQ-LRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVK 545

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG +  A R+FD +  +++I+WT ++ G   +G+G++A+  ++QM   G  PD  +F  +
Sbjct: 546 CGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAI 605

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L+ACSH+GL +    +F++M K + I+P   HY CM+DLL  +G L EA   +D M  EP
Sbjct: 606 LYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEP 665

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
           D+++W +LL  CR+H +++L E  A  +FELEP N   YV L+N+Y+ A +WE   +++ 
Sbjct: 666 DSSIWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGYYVLLANIYAEAERWEAVRKLKN 725

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
            +  RG+R+  GCSW+E   +VH+FI+++R HP  T I   ++E+   ++E G+ P   +
Sbjct: 726 KIGGRGLRENTGCSWIEAKGKVHVFIADNRNHPQGTRIAEFLNEVAKRMQEEGHDPKKKY 785

Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
           AL   +       L  HS KLAVAFG+L L +G  IR+ KN RVC  CH A K+IS +  
Sbjct: 786 ALMGADNAVHGEALCGHSSKLAVAFGVLNLSEGRLIRVTKNSRVCSHCHEAAKFISKMCS 845

Query: 785 RHIILRDSNRFHHFKAGNCSCGDYW 809
           R IILRDSNRFHHF+ G CSC  YW
Sbjct: 846 REIILRDSNRFHHFEQGRCSCRGYW 870



 Score = 45.8 bits (107), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 5/91 (5%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF-- 98
           AL+D +   G +  A +LF+++S+++  +W  M+A Y   GR R+A  LF +        
Sbjct: 538 ALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAP 597

Query: 99  --FTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
              ++S+++Y  S+ GL  E +  F  M+ E
Sbjct: 598 DAASFSAILYACSHSGLRDEGWRFFDAMRKE 628


>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
          Length = 855

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 304/839 (36%), Positives = 474/839 (56%), Gaps = 68/839 (8%)

Query: 20  IGPARYTHNVGNSVKPASDL---NRALVDFSNSGEIDEAGQLFEK-MSDRDGFTWNTMIA 75
           +  AR  H    +V  AS +   N  L  + + G + +A +L    + + +  T N M+ 
Sbjct: 36  LAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMN 95

Query: 76  AYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYG-------------LDIEAFELFW 122
            YA  G L +A++LF+  P ++  +W++L+   S                L  +   LFW
Sbjct: 96  GYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELAPQLLGLFW 155

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           +    G    +  L ++   C       R   F      T F  N+ +       YAK  
Sbjct: 156 KFDFWGDPDVETALVDMFVRCGYVDFASR--LFSQIERPTIFCRNSMLAG-----YAKLY 208

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            I  A   F+   + ++ V+W  MI   SQ+G   +A+    +M  +GV  +  T+ S L
Sbjct: 209 GIDHAIEYFEDMAE-RDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSL 267

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           TACA + +  +G Q+H  ++ S  + + YV SALI++YAKCG    A+R+    +  N V
Sbjct: 268 TACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSV 327

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SW  +I G  +     +++ LF +M A  + ID F   ++++   + +DL   + +HSL 
Sbjct: 328 SWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLC 387

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG----------- 411
           +K+G      V+N+LI +YAK G+L  A  VF+ M ++D++SWTS+IT            
Sbjct: 388 LKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAR 447

Query: 412 ------------------CAY--HGSYEEALKYFSDM-RISGICPDHVVVSSILSACAEL 450
                              AY  HG+ E+ LK +S M     + PD V   ++   CA++
Sbjct: 448 EFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADI 507

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
              + G Q+    +K+G   ++SV N+ + +Y+KCG I++A ++FD ++ +DV++W A+I
Sbjct: 508 GANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMI 567

Query: 511 MGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGI 570
            G +Q+G GK+A + +D ML++G KPDYI++V +L  CSH+GL +  + YF+ M +V+GI
Sbjct: 568 TGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGI 627

Query: 571 KPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAAN 630
            PG +H++CM+DLLGR+G L EAK L+D+M  +P A VW ALLSAC++HG+ EL E AA 
Sbjct: 628 SPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAK 687

Query: 631 NLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFI 690
           ++FEL+  ++  Y+ L+ +YS AGK +D+A+VRKLM+ +GI+K PG SW+E  ++VH+F 
Sbjct: 688 HVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFK 747

Query: 691 SEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFG 750
           ++D  HP    I +K+DE+M  I   GYV          E    EI   +HSEKLAVAFG
Sbjct: 748 ADDVSHPQVIAIRNKMDELMEKIAHLGYV--------RTESPRSEI---HHSEKLAVAFG 796

Query: 751 LLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +++LP   PI I KNLR+CGDCHT +K IS+V  R  ++RD  RFHHFK+G+CSCGDYW
Sbjct: 797 IMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 855



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 155/577 (26%), Positives = 259/577 (44%), Gaps = 74/577 (12%)

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
            L + LR C  +G L      HG  +        F+   L+  Y  C  + +A  L +  
Sbjct: 22  ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 81

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES-----NQFTFPS-ILTACAAV 248
               N +    M+ GY++ G    A E F  M    V S     +  + P+    +C A+
Sbjct: 82  IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGAL 141

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL---------------- 292
             R+   Q+ G      F  +  V++AL+DM+ +CG +D A RL                
Sbjct: 142 GCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSML 201

Query: 293 ------------LEYSEIDNE---VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
                       +EY E   E   VSWN MI   ++ G  +EAL L  +MH + +++D  
Sbjct: 202 AGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDST 261

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           TY S L   A    L   K +H+ ++++  +   +V +ALI++YAK G+   A  VFN +
Sbjct: 262 TYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSL 321

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
           QD++ +SWT LI G   +  + ++++ F+ MR   +  D   +++++S C     L  G+
Sbjct: 322 QDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGR 381

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
           Q+H++ LKSG   ++ V NSL+ +YAKCG + +A  VF SM  RD+++WT++I   +Q G
Sbjct: 382 QLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIG 441

Query: 518 KGKEALQFYDQMLARG--------------------------------TKPDYITFVGLL 545
              +A +F+D M  R                                   PD++T+V L 
Sbjct: 442 NIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLF 501

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
             C+  G  +          K  G+          I +  + G++ EA+ L D + G+ D
Sbjct: 502 RGCADIGANKLGDQIIGHTVKA-GLILNVSVANAAITMYSKCGRISEAQKLFDLLNGK-D 559

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
              W A+++    HG   +G++AA    ++    A P
Sbjct: 560 VVSWNAMITGYSQHG---MGKQAAKTFDDMLSKGAKP 593


>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
 gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
          Length = 803

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 275/709 (38%), Positives = 414/709 (58%), Gaps = 67/709 (9%)

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
           NAF    L+ MYAK   + +A  +F   P+ ++ V+WT M+ G ++ G  + A++ F DM
Sbjct: 96  NAFTWNSLLSMYAKSGRLADARVVFAQMPE-RDAVSWTVMVVGLNRAGRFWDAVKTFLDM 154

Query: 227 RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDL 286
             EG+  +QF   ++L++CAA  AR  G +VH  ++  G  + V V ++++ MY KCGD 
Sbjct: 155 VGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDA 214

Query: 287 DSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI-------------- 332
           ++AR + E  ++ +E SWN+M+  +  QG    ALS+F+ M  R I              
Sbjct: 215 ETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNG 274

Query: 333 ------------------KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
                             + D+FT  SVL+  A+   L   K +HS I++TG      + 
Sbjct: 275 LDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIM 334

Query: 375 NALIDMYAKQGNLDCAFM---------------------------------VFNLMQDKD 401
           NALI  YAK G+++ A                                   VF++M ++D
Sbjct: 335 NALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRD 394

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
           VI+WT++I G   +G  +EA++ F  M  SG  P+   ++++LSACA L  L +G+Q+H 
Sbjct: 395 VIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHC 454

Query: 462 VFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGK 520
             ++S    S+SV N+++ VYA+ G +  A RVFD +  R + +TWT++I+  AQ+G G+
Sbjct: 455 RAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGE 514

Query: 521 EALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACM 580
           +A+  +++ML  G KPD +T++G+  AC+HAG  +  + Y+E M   +GI P   HYACM
Sbjct: 515 QAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACM 574

Query: 581 IDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNA 640
           +DLL R+G L EA   + +M   PD  VW +LL+ACRV  + +L E AA  L  ++P N+
Sbjct: 575 VDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNS 634

Query: 641 MPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRT 700
             Y  L+N+YS  G+W DAAR+ KL K + ++KE G SW    S+VH+F ++D  HP R 
Sbjct: 635 GAYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRD 694

Query: 701 DIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPI 760
            I  K  E+   IK+AG+VPD+N  LH+V++E KE  L+ HSEKLA+AFGL++ P+   +
Sbjct: 695 AICKKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTL 754

Query: 761 RIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           RI KNLRVC DCHTA+K+IS V  R II+RD+ RFHHF+ G CSC DYW
Sbjct: 755 RIMKNLRVCNDCHTAIKFISKVVDREIIVRDATRFHHFRDGYCSCKDYW 803



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 145/533 (27%), Positives = 253/533 (47%), Gaps = 69/533 (12%)

Query: 50  GEIDEAGQLFEKM--SDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYG 107
           G   EA +LF+ +  + R+ FTWN++++ YA SGRL +A+ +F + P ++  +W+ ++ G
Sbjct: 78  GCFHEARRLFDDIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVG 137

Query: 108 YSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLN 167
            +  G   +A + F  M  EG  PSQ+ L NVL  C+       G + H + IK      
Sbjct: 138 LNRAGRFWDAVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSC 197

Query: 168 AFVVTGLVDMYAKC------KCIFE----------------------AEYLFKMFP--DG 197
             V   ++ MY KC      + +FE                       +    MF   + 
Sbjct: 198 VPVANSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEE 257

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECF-RDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
           ++ V+W  +I GY+QNG    A++ F R +    +E ++FT  S+L+ACA +     G Q
Sbjct: 258 RSIVSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQ 317

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI------------------ 298
           +H  IL +G   +  + +ALI  YAK G +++ARR+++ + +                  
Sbjct: 318 MHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKL 377

Query: 299 ---------------DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
                           + ++W +MIVG+ + G + EA+ LF+ M     + +  T  +VL
Sbjct: 378 GDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVL 437

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN-LMQDKDV 402
           +  AS   L   K +H   +++  E    V+NA+I +YA+ G++  A  VF+ +   K+ 
Sbjct: 438 SACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKET 497

Query: 403 ISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAV 462
           ++WTS+I   A HG  E+A+  F +M   G+ PD V    + SAC     ++ G++ +  
Sbjct: 498 VTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQ 557

Query: 463 FLKSGG-CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
            L   G    +S    +V + A+ G + +A+     M    D + W +L+  C
Sbjct: 558 MLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAAC 610



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 142/554 (25%), Positives = 245/554 (44%), Gaps = 96/554 (17%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  L  +   G+ + A  +FE+M  R   +WN M++ Y + GR+  A  +F     ++  
Sbjct: 202 NSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIV 261

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
           +W+++I GY+  GLD  A + F +M       P ++T+ +VL  C+   +L+ G+Q H Y
Sbjct: 262 SWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSY 321

Query: 159 AIKTCF---------------------------------DLNAFVVTGLVDMYAKCKCIF 185
            ++T                                   DLN    T L++ Y K     
Sbjct: 322 ILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTK 381

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A  +F +  + ++ +AWT MI GY QNG   +A+E FR M   G E N  T  ++L+AC
Sbjct: 382 QAREVFDVM-NNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSAC 440

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE-VSW 304
           A+++   +G Q+H   + S  E +V V +A+I +YA+ G +  ARR+ +      E V+W
Sbjct: 441 ASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTW 500

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
            SMIV  A+ G  ++A+ LF++M    +K D  TY  V +              H+  + 
Sbjct: 501 TSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSA-----------CTHAGFID 549

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            G   Y+        M  + G +             ++  +  ++   A  G   EA ++
Sbjct: 550 KGKRYYE-------QMLNEHGIV------------PEMSHYACMVDLLARAGLLTEAHEF 590

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-----LV 479
              M ++   PD VV  S+L+AC      +  +      L +    S+  DNS     L 
Sbjct: 591 IQRMPVA---PDTVVWGSLLAACRVRKNADLAE------LAAEKLLSIDPDNSGAYSALA 641

Query: 480 LVYAKCGCINDANRVFDSMHTRDV-----ITWTAL-----------IMGCAQNGKGKEAL 523
            VY+ CG  NDA R++     + V      +WT +           ++   ++   K+A 
Sbjct: 642 NVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAICKKAA 701

Query: 524 QFYDQMLARGTKPD 537
           + ++++   G  PD
Sbjct: 702 EMWEEIKKAGFVPD 715



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 138/276 (50%), Gaps = 4/276 (1%)

Query: 39  LNRALVDFSNSGEIDEAGQLFEK--MSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK 96
           +N  +  ++ SG ++ A ++ +K  ++D +  ++  ++  Y   G  ++A+++F+    +
Sbjct: 334 MNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNR 393

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
           +   W+++I GY   G + EA ELF  M   G  P+ +TL  VL  C+    L  G+Q H
Sbjct: 394 DVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIH 453

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
             AI++  + +  V   ++ +YA+   +  A  +F      K  V WT+MI   +Q+G G
Sbjct: 454 CRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLG 513

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSA 275
            +AI  F +M   GV+ ++ T+  + +AC      D G + +  +L+  G    +   + 
Sbjct: 514 EQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYAC 573

Query: 276 LIDMYAKCGDLDSARRLLEYSEI-DNEVSWNSMIVG 310
           ++D+ A+ G L  A   ++   +  + V W S++  
Sbjct: 574 MVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAA 609



 Score = 47.0 bits (110), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 45/216 (20%), Positives = 88/216 (40%), Gaps = 39/216 (18%)

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKC----GCINDANRVFD--------------- 496
           G+ +HA  +K+G   S  + N+L+  YA+     GC ++A R+FD               
Sbjct: 44  GRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWNSL 103

Query: 497 ------------------SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDY 538
                              M  RD ++WT +++G  + G+  +A++ +  M+  G  P  
Sbjct: 104 LSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQ 163

Query: 539 ITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLD 598
                +L +C+ A  A        S     G+         ++ + G+ G    A+A+ +
Sbjct: 164 FMLTNVLSSCA-ATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFE 222

Query: 599 QMVGEPDATVWKALLSACRVHGDLELGERAANNLFE 634
           +M    +++ W A++S     G ++L      N+ E
Sbjct: 223 RMKVRSESS-WNAMVSLYTHQGRMDLALSMFENMEE 257


>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 284/734 (38%), Positives = 420/734 (57%), Gaps = 2/734 (0%)

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
           Y N G L+EA ++F++   +    W+ L+   +  G    +  LF +M   G     YT 
Sbjct: 139 YTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198

Query: 137 DNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD 196
             V +  S    +  GEQ HGY +K+ F     V   LV  Y K   +  A  +F    +
Sbjct: 199 SCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTE 258

Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
            ++ ++W ++I GY  NG   K +  F  M   G+E +  T  S+   CA       G  
Sbjct: 259 -RDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRA 317

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           VH   + + F       + L+DMY+KCGDLDSA+ +       + VS+ SMI G+AR+G 
Sbjct: 318 VHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGL 377

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
             EA+ LF++M    I  D +T  +VLNC A N  L+  K VH  I +       FV+NA
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNA 437

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG-ICP 435
           L+DMYAK G++  A +VF+ M+ KD+ISW ++I G + +    EAL  F+ + +     P
Sbjct: 438 LMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSP 497

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           D   V+ +L ACA L+  + G+++H   +++G  S   V NSLV +YAKCG +  A  +F
Sbjct: 498 DERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLF 557

Query: 496 DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAE 555
           D + ++D+++WT +I G   +G GKEA+  ++QM   G +PD I+FV LL+ACSH+GL +
Sbjct: 558 DDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVD 617

Query: 556 NARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
               +F  M     I+P  +HYAC++D+L R+G L +A   ++ M   PDAT+W ALL  
Sbjct: 618 EGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCG 677

Query: 616 CRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEP 675
           CR+H D++L ER A  +FELEP N   YV ++N+Y+ A KWE+  R+RK +  RG+RK P
Sbjct: 678 CRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNP 737

Query: 676 GCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKE 735
           GCSW+E   +V+IF++ D  +P    I + +  +   + E GY P   +AL + EE  KE
Sbjct: 738 GCSWIEIKGRVNIFVAGDSSNPETEKIEAFLRGVRARMIEEGYSPLTKYALIDAEEMEKE 797

Query: 736 IGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRF 795
             L  HSEKLA+A G+++   G  IR+ KNLRVCGDCH   K++S +  R I+LRDSNRF
Sbjct: 798 EALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRF 857

Query: 796 HHFKAGNCSCGDYW 809
           H FK G+CSC  +W
Sbjct: 858 HQFKDGHCSCRGFW 871



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 137/447 (30%), Positives = 241/447 (53%), Gaps = 6/447 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N+++A Y  + R+  A+K+F+E   ++  +W+S+I GY + GL  +   +F QM   G  
Sbjct: 234 NSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIE 293

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
               T+ +V   C+   L+  G   H + +K CF         L+DMY+KC  +  A+ +
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVV 353

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F+    G++ V++T+MI GY++ G   +A++ F +M  EG+  + +T  ++L  CA    
Sbjct: 354 FREMS-GRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRL 412

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            D G +VH  I  +    +++V +AL+DMYAKCG +  A  +     + + +SWN++I G
Sbjct: 413 LDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGG 472

Query: 311 FARQGFHKEALSLFKKMHA-RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           +++  +  EALSLF  +   +    D+ T   VL   AS    +  + +H  I++ G+  
Sbjct: 473 YSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS 532

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
            + V N+L+DMYAK G L  A ++F+ +  KD++SWT +I G   HG  +EA+  F+ MR
Sbjct: 533 DRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMR 592

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLVLVYAKCGC 487
            +GI PD +   S+L AC+   +++ G +   +          +V++   +V + A+ G 
Sbjct: 593 QAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP-TVEHYACIVDMLARTGN 651

Query: 488 INDANRVFDSMHT-RDVITWTALIMGC 513
           ++ A R  ++M    D   W AL+ GC
Sbjct: 652 LSKAYRFIENMPIPPDATIWGALLCGC 678



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 149/493 (30%), Positives = 257/493 (52%), Gaps = 16/493 (3%)

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
           TL +VL+LC+    L+ G++   +     F L++ + + L  MY  C  + EA  +F   
Sbjct: 96  TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQV 155

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
              K  + W  ++   +++G    +I  F+ M   GVE + +TF  +  + +++ + + G
Sbjct: 156 KIEK-ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGG 214

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
            Q+HG IL SGF     V ++L+  Y K   +DSAR++ +     + +SWNS+I G+   
Sbjct: 215 EQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSN 274

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
           G  ++ LS+F +M    I+ID  T  SV    A +  ++  ++VH   VK  F       
Sbjct: 275 GLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFC 334

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           N L+DMY+K G+LD A +VF  M  + V+S+TS+I G A  G   EA+K F +M   GI 
Sbjct: 335 NTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           PD   V+++L+ CA   +L+ G++VH    ++     + V N+L+ +YAKCG + +A  V
Sbjct: 395 PDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELV 454

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA-RGTKPDYITFVGLLFACSHAGL 553
           F  M  +D+I+W  +I G ++N    EAL  ++ +L  +   PD  T   +L AC+    
Sbjct: 455 FSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSA 514

Query: 554 AENARWYFESMDKVYG--IKPG---PDHYA-CMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
            +  R       +++G  ++ G     H A  ++D+  + G L+ A+ L D +  + D  
Sbjct: 515 FDKGR-------EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSK-DLV 566

Query: 608 VWKALLSACRVHG 620
            W  +++   +HG
Sbjct: 567 SWTVMIAGYGMHG 579



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 123/362 (33%), Positives = 194/362 (53%), Gaps = 32/362 (8%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           NT++  Y+  G L  AK +F E   ++  +++S+I GY+  GL  EA +LF +M+ EG  
Sbjct: 335 NTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  YT+  VL  C+   LL  G++ H +  +     + FV   L+DMYAKC  + EAE +
Sbjct: 395 PDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELV 454

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACAAVS 249
           F      K+ ++W T+I GYS+N Y  +A+  F  + VE     ++ T   +L ACA++S
Sbjct: 455 FSEMR-VKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLS 513

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
           A D G ++HG I+ +G+ ++ +V ++L+DMYAKCG L  AR L +     + VSW  MI 
Sbjct: 514 AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIA 573

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           G+   GF KEA++LF +M    I+ D+ ++ S+L   +           HS +V    EG
Sbjct: 574 GYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACS-----------HSGLVD---EG 619

Query: 370 YKFVN---------------NALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCA 413
           ++F N                 ++DM A+ GNL  A+  + N+    D   W +L+ GC 
Sbjct: 620 WRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCR 679

Query: 414 YH 415
            H
Sbjct: 680 IH 681



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 137/270 (50%), Gaps = 16/270 (5%)

Query: 52  IDEAGQLFEKMSDRDG----FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYG 107
           +DE  ++ E + + D     F  N ++  YA  G +REA+ +F+E   K+  +W+++I G
Sbjct: 413 LDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGG 472

Query: 108 YSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDL 166
           YS      EA  LF  + +E  + P + T+  VL  C+      +G + HGY ++  +  
Sbjct: 473 YSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS 532

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
           +  V   LVDMYAKC  +  A  LF      K+ V+WT MI GY  +G+G +AI  F  M
Sbjct: 533 DRHVANSLVDMYAKCGALLLARLLFDDIT-SKDLVSWTVMIAGYGMHGFGKEAIALFNQM 591

Query: 227 RVEGVESNQFTFPSILTACAAVSARD-----FGAQVHGCILSSGFEANVYVQSALIDMYA 281
           R  G+E ++ +F S+L AC+     D     F    H C +    E  V   + ++DM A
Sbjct: 592 RQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI----EPTVEHYACIVDMLA 647

Query: 282 KCGDLDSARRLLEYSEIDNEVS-WNSMIVG 310
           + G+L  A R +E   I  + + W +++ G
Sbjct: 648 RTGNLSKAYRFIENMPIPPDATIWGALLCG 677



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 136/302 (45%), Gaps = 11/302 (3%)

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N+ +  F   G  K A+ L       DI  D  T  SVL   A +  L + K V + I  
Sbjct: 65  NTQLRRFCESGNLKNAVKLLHVSGKWDI--DPRTLCSVLQLCADSKSLKDGKEVDNFIRG 122

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            GF     + + L  MY   G+L  A  VF+ ++ +  + W  L+   A  G +  ++  
Sbjct: 123 NGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSGDFSGSIGL 182

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           F  M  SG+  D    S +  + + L  +  G+Q+H   LKSG     SV NSLV  Y K
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLK 242

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
              ++ A +VFD M  RDVI+W ++I G   NG  ++ L  + QML  G + D  T V +
Sbjct: 243 NHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSV 302

Query: 545 LFACSHAGLAENARWYFESMDKVYGIK---PGPDHYA-CMIDLLGRSGKLIEAKALLDQM 600
              C+ + L    R         +G+K      D +   ++D+  + G L  AK +  +M
Sbjct: 303 FAGCADSRLISLGRAV-----HCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREM 357

Query: 601 VG 602
            G
Sbjct: 358 SG 359


>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  530 bits (1366), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 286/771 (37%), Positives = 442/771 (57%), Gaps = 33/771 (4%)

Query: 40   NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
            N  +  FS+   ++EA  +F+ M++ D  +WN MI+AYA+ G  RE+ + F+        
Sbjct: 986  NSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFH-------- 1037

Query: 100  TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
             W   ++  +N               L        ++DN          L+ G   HG  
Sbjct: 1038 -WMRHLHNETN------------STTLSSLLSVCSSVDN----------LKWGRGIHGLV 1074

Query: 160  IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
            +K   D N  +   L+ +Y++     +AE +F+   + ++ ++W +M+  Y Q+G     
Sbjct: 1075 VKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTE-RDLISWNSMMACYVQDGKCLDG 1133

Query: 220  IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
            ++   ++   G   N  TF S L AC+          VH  I+ +GF   + V +AL+ M
Sbjct: 1134 LKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTM 1193

Query: 280  YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
            Y K G +  A+++L+     + V+WN++I G A      EA+  +K +  + I  +  T 
Sbjct: 1194 YGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITM 1253

Query: 340  PSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
             SVL  C A +  L +   +H+ IV TGFE   +V N+LI MYAK G+L+ +  +F+ + 
Sbjct: 1254 VSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLG 1313

Query: 399  DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
            +K  I+W +++   A+HG  EEALK F +MR  G+  D    S  L+A A L VLE GQQ
Sbjct: 1314 NKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQ 1373

Query: 459  VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK 518
            +H + +K G  S L V N+ + +Y KCG ++D  ++      R  ++W  LI   A++G 
Sbjct: 1374 LHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGC 1433

Query: 519  GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA 578
             ++A + + +ML  G KPD++TFV LL AC+H GL +    Y++SM + +G+ PG +H  
Sbjct: 1434 FQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCV 1493

Query: 579  CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM 638
            C+IDLLGRSG+L  A+  + +M   P+   W++LL+ACR+HG+LEL  + A +L EL+P 
Sbjct: 1494 CIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPS 1553

Query: 639  NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPL 698
            +   YV  SN+ +T+GKWED   +RK M S  I+K+P CSWV+   +VH F   ++ HP 
Sbjct: 1554 DDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQ 1613

Query: 699  RTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA 758
             + I +K+ E+M + KEAGYVPD +FALH+++EE KE  L  HSE+LA+AFGL+  P+ +
Sbjct: 1614 ASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESS 1673

Query: 759  PIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             +RIFKNLRVCGDCH+  K++S +  R I+LRD  RFHHF  G CSCGDYW
Sbjct: 1674 TLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1724



 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/613 (37%), Positives = 339/613 (55%), Gaps = 36/613 (5%)

Query: 74  IAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQ 133
           I +  N GRL EA KL +  P +                LD                PS 
Sbjct: 5   IQSACNLGRLAEALKLLSSNPTR----------------LD----------------PSL 32

Query: 134 YTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKM 193
           Y    +L+LC  K   ++G   H + I   F  +  + T L+  Y K   +  A  +F  
Sbjct: 33  YL--KILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDG 90

Query: 194 FPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDF 253
            P+ ++ V+WT M++GYSQNG   KA   F DMR  GV++NQFT+ S L AC ++   D 
Sbjct: 91  MPE-RSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDM 149

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           G QV GCI    F  N++V+SAL+D ++KCG ++ A  L       + VSWN+MI G+A 
Sbjct: 150 GIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAV 209

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
           QGF  ++  +F+ M    +  D +T  SVL   A    L  A  +H +I + G+  Y  V
Sbjct: 210 QGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIV 269

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE-EALKYFSDMRISG 432
              LI+ YAK G+L  A  +   M  KD+ S T+LITG A+ G Y  +AL  F +M    
Sbjct: 270 TGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMN 329

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
           I  D V++ S+L+ CA L     G Q+HA  LK      +++ N+L+ +YAK G I DA 
Sbjct: 330 IGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAK 389

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
           R FD M  ++VI+WT+LI G A++G G  A+  Y +M ++G KP+ +TF+ LLFACSH G
Sbjct: 390 RAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTG 449

Query: 553 LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
           L       F +M   Y IKP  +HY+CM+DL  R G L EA  LL ++  + +A++W A+
Sbjct: 450 LTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAI 509

Query: 613 LSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIR 672
           L A  ++G + LG+ AA+NLF ++P N++ YV L+++YS AG W+DA ++RKLM+ R  +
Sbjct: 510 LGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTK 569

Query: 673 KEPGCSWVETNSQ 685
           K  G S+ +   +
Sbjct: 570 KNAGYSFFQATKK 582



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 173/563 (30%), Positives = 291/563 (51%), Gaps = 21/563 (3%)

Query: 68   FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
            F  NT+I  Y+  G +  A+ +F+E   +N  +WS+++ GY   GL  EA  LF QM   
Sbjct: 780  FQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGL 839

Query: 128  GYRPSQYTLDNVLRLCSLKGLL-QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
            G  P+ + + +++  CS  G +   G Q HG+ +KT    + +V T LV  Y     ++ 
Sbjct: 840  GVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYN 899

Query: 187  AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
            A+ LF+  PD  N V+WT+++ GYS +G   + +  ++ MR EGV  NQ TF ++ ++C 
Sbjct: 900  AQKLFEEMPD-HNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCG 958

Query: 247  AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
             +  +  G QV G I+  GFE +V V ++LI M++    ++ A  + ++    + +SWN+
Sbjct: 959  LLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNA 1018

Query: 307  MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
            MI  +A  G  +E+L  F  M     + +  T  S+L+  +S  +L   + +H L+VK G
Sbjct: 1019 MISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLG 1078

Query: 367  FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
             +    + N L+ +Y++ G  + A +VF  M ++D+ISW S++      G   + LK  +
Sbjct: 1079 LDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILA 1138

Query: 427  DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
            ++   G   +HV  +S L+AC+    L   + VHA+ + +G    L V N+LV +Y K G
Sbjct: 1139 ELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLG 1198

Query: 487  CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
             + +A +V  +M   D +TW ALI G A+N +  EA++ Y  +  +G   +YIT V +L 
Sbjct: 1199 MMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLG 1258

Query: 547  ACSHA------GLAENARWY---FESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALL 597
            ACS        G+  +A      FES D V            +I +  + G L  +  + 
Sbjct: 1259 ACSAPDDLLKHGMPIHAHIVLTGFESDDYVKN---------SLITMYAKCGDLNSSNYIF 1309

Query: 598  DQMVGEPDATVWKALLSACRVHG 620
            D + G      W A+++A   HG
Sbjct: 1310 DGL-GNKSPITWNAMVAANAHHG 1331



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 162/573 (28%), Positives = 289/573 (50%), Gaps = 4/573 (0%)

Query: 66   DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
            D +    ++  Y + G +  A+KLF E P  N  +W+SL+ GYS+ G   E   ++ +M+
Sbjct: 880  DVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMR 939

Query: 126  LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             EG   +Q T   V   C L      G Q  G+ I+  F+ +  V   L+ M++    + 
Sbjct: 940  QEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVE 999

Query: 186  EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            EA Y+F    +  + ++W  MI+ Y+ +G   +++ CF  MR    E+N  T  S+L+ C
Sbjct: 1000 EACYVFDHMNEC-DIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVC 1058

Query: 246  AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
            ++V    +G  +HG ++  G ++NV + + L+ +Y++ G  + A  + +     + +SWN
Sbjct: 1059 SSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWN 1118

Query: 306  SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
            SM+  + + G   + L +  ++      ++  T+ S L   ++   L  +K VH+LI+  
Sbjct: 1119 SMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVA 1178

Query: 366  GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
            GF  +  V NAL+ MY K G +  A  V   M   D ++W +LI G A +    EA+K +
Sbjct: 1179 GFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAY 1238

Query: 426  SDMRISGICPDHVVVSSILSAC-AELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
              +R  GI  +++ + S+L AC A   +L+ G  +HA  + +G  S   V NSL+ +YAK
Sbjct: 1239 KLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAK 1298

Query: 485  CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
            CG +N +N +FD +  +  ITW A++   A +G G+EAL+ + +M   G   D  +F G 
Sbjct: 1299 CGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGG 1358

Query: 545  LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
            L A ++  + E  +     + K+ G +         +D+ G+ G++ +   +L Q +   
Sbjct: 1359 LAATANLAVLEEGQQLHGLVIKL-GFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRS 1417

Query: 605  DATVWKALLSACRVHGDLELGERAANNLFELEP 637
              + W  L+SA   HG  +      + + +L P
Sbjct: 1418 RLS-WNILISAFARHGCFQKARETFHEMLKLGP 1449



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 161/550 (29%), Positives = 277/550 (50%), Gaps = 20/550 (3%)

Query: 77   YANSGRLREAKKLFNETPFKNFFT------WSSLIYGYSNYG-LDIEAFELFWQMQLEGY 129
            +A    +  A  L NETP +NF          +   G   +G LD +  ++F Q Q   Y
Sbjct: 680  WAPVSTITTASALINETPVENFAEQVKDDDLKTSNAGSRRWGCLDGDIAKVFLQQQHTDY 739

Query: 130  RPSQYTLDNVLRLCSLKGLLQ-----RGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
                    N      LKG  +      G+  H + I    +L  F    L++MY+K   I
Sbjct: 740  GIRCLNAVNF----PLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNI 795

Query: 185  FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
              A Y+F      +N  +W+TM++GY + G   +A+  F  M   GVE N F   S++TA
Sbjct: 796  EHARYVFDEMRH-RNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITA 854

Query: 245  CAAVS-ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
            C+      D G QVHG ++ +G   +VYV +AL+  Y   G + +A++L E     N VS
Sbjct: 855  CSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVS 914

Query: 304  WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
            W S++VG++  G   E L+++++M    +  +  T+ +V +      D      V   I+
Sbjct: 915  WTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHII 974

Query: 364  KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
            + GFE    V N+LI M++   +++ A  VF+ M + D+ISW ++I+  A+HG   E+L+
Sbjct: 975  QYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLR 1034

Query: 424  YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
             F  MR      +   +SS+LS C+ +  L++G+ +H + +K G  S++ + N+L+ +Y+
Sbjct: 1035 CFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYS 1094

Query: 484  KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
            + G   DA  VF +M  RD+I+W +++    Q+GK  + L+   ++L  G   +++TF  
Sbjct: 1095 EAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFAS 1154

Query: 544  LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
             L ACS+      ++    ++  V G          ++ + G+ G ++EAK +L Q + +
Sbjct: 1155 ALAACSNPECLIESK-IVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVL-QTMPQ 1212

Query: 604  PDATVWKALL 613
            PD   W AL+
Sbjct: 1213 PDRVTWNALI 1222



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 127/377 (33%), Positives = 197/377 (52%), Gaps = 2/377 (0%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +I  Y   G +  A+ +F+  P ++  +W++++ GYS  G   +AF LF  M+  G + +
Sbjct: 71  LIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKAN 130

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
           Q+T  + LR C+    L  G Q  G   K  F  N FV + LVD ++KC  + +A YLF 
Sbjct: 131 QFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFG 190

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
              + ++ V+W  MI GY+  G+   +   FR M   G+  + +T  S+L A A      
Sbjct: 191 TMME-RDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLI 249

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
              Q+HG I   G+ +   V   LI+ YAK G L SA+ L +     +  S  ++I G+A
Sbjct: 250 IANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYA 309

Query: 313 RQGFHK-EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
            +G +  +AL LFK+M+  +I +DD    S+LN  A+         +H+  +K       
Sbjct: 310 HEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDV 369

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
            + NALIDMYAK G ++ A   F+ M++K+VISWTSLI+G A HG    A+  +  M   
Sbjct: 370 AMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESK 429

Query: 432 GICPDHVVVSSILSACA 448
           G  P+ V   S+L AC+
Sbjct: 430 GFKPNDVTFLSLLFACS 446



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 197/385 (51%), Gaps = 8/385 (2%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  + ++  ++  G++ +A  LF     ++  +W+++I GY+  G   ++F +F  M   
Sbjct: 167 FVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRG 226

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G  P  YTL +VLR  +  G L    Q HG   +  +     V   L++ YAK   +  A
Sbjct: 227 GLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSA 286

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNG-YGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           + L K     K+  + T +ITGY+  G Y   A++ F++M    +  +     S+L  CA
Sbjct: 287 KDLRKGMLK-KDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICA 345

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            +++   G Q+H   L      +V + +ALIDMYAK G+++ A+R  +  E  N +SW S
Sbjct: 346 NLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTS 405

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKT 365
           +I G+A+ G+   A+SL+KKM ++  K +D T+ S+L  C  + +     +  ++++ K 
Sbjct: 406 LISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKY 465

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSY---EEA 421
             +      + ++D++A+QG L+ A+ +   +  K   S W +++   + +G     +EA
Sbjct: 466 NIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEA 525

Query: 422 LKYFSDMRISGICPDHVVVSSILSA 446
                +M+      ++VV++SI SA
Sbjct: 526 ASNLFNMQPEN-SVNYVVLASIYSA 549



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 190/396 (47%), Gaps = 24/396 (6%)

Query: 234  NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
            N   FP  L   + ++++  G  +H   +       ++  + LI+MY+K G+++ AR + 
Sbjct: 745  NAVNFP--LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVF 802

Query: 294  EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDL 352
            +     NE SW++M+ G+ R G ++EA+ LF +M    ++ + F   S++  C  S    
Sbjct: 803  DEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMA 862

Query: 353  NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
            +    VH  +VKTG  G  +V  AL+  Y   G +  A  +F  M D +V+SWTSL+ G 
Sbjct: 863  DEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGY 922

Query: 413  AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
            +  G+  E L  +  MR  G+  +    +++ S+C  L     G QV    ++ G   S+
Sbjct: 923  SDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSV 982

Query: 473  SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
            SV NSL+ +++    + +A  VFD M+  D+I+W A+I   A +G  +E+L+ +  M   
Sbjct: 983  SVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHL 1042

Query: 533  GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPGPDHYACMIDLL------ 584
              + +  T        S     +N +W       ++G  +K G D   C+ + L      
Sbjct: 1043 HNETNSTTLS---SLLSVCSSVDNLKW----GRGIHGLVVKLGLDSNVCICNTLLTLYSE 1095

Query: 585  -GRSGKLIEAKALLDQMVGEPDATVWKALLSACRVH 619
             GRS    E   L+ Q + E D   W +++ AC V 
Sbjct: 1096 AGRS----EDAELVFQAMTERDLISWNSMM-ACYVQ 1126



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 138/269 (51%), Gaps = 7/269 (2%)

Query: 355  AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
             K++H+  +        F  N LI+MY+K GN++ A  VF+ M+ ++  SW+++++G   
Sbjct: 763  GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 822

Query: 415  HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL-EFGQQVHAVFLKSGGCSSLS 473
             G YEEA+  F  M   G+ P+  +V+S+++AC+    + + G QVH   +K+G    + 
Sbjct: 823  VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVY 882

Query: 474  VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
            V  +LV  Y   G + +A ++F+ M   +V++WT+L++G + +G   E L  Y +M   G
Sbjct: 883  VGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEG 942

Query: 534  TKPDYITFVGLLFACSHAGLAENARWYFESMDKV--YGIKPGPDHYACMIDLLGRSGKLI 591
               +  TF  +  +C   GL E+    ++ +  +  YG +        +I +      + 
Sbjct: 943  VSGNQNTFATVTSSC---GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVE 999

Query: 592  EAKALLDQMVGEPDATVWKALLSACRVHG 620
            EA  + D M  E D   W A++SA   HG
Sbjct: 1000 EACYVFDHM-NECDIISWNAMISAYAHHG 1027



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 111/251 (44%), Gaps = 25/251 (9%)

Query: 34  KPASD--LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF 90
           +P+ D  +  AL+D ++ SGEI++A + F++M +++  +W ++I+ YA  G    A  L+
Sbjct: 364 QPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLY 423

Query: 91  NETPFKNF----FTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSL 145
            +   K F     T+ SL++  S+ GL  E  E F  M  +   +P       ++ L + 
Sbjct: 424 KKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFAR 483

Query: 146 KGLLQRGEQFHGYAIKTCFDLNAFV---VTGLVDMYAKCKCIFE-AEYLFKMFPDGKNHV 201
           +GLL   E+ +    K     NA +   + G   +Y       E A  LF M P+  N V
Sbjct: 484 QGLL---EEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPE--NSV 538

Query: 202 AWTTMITGYSQNGYGFKAIECFRDMRVEGVESN------QFTFPSI--LTACAAVSARDF 253
            +  + + YS  G    A +  + M     + N      Q T  SI  L     VS RDF
Sbjct: 539 NYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGYSFFQATKKSIPLLQVQHGVSRRDF 598

Query: 254 GAQVHGCILSS 264
                G I  S
Sbjct: 599 NILDFGAIFLS 609


>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
 gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
 gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 786

 Score =  530 bits (1366), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 303/786 (38%), Positives = 426/786 (54%), Gaps = 110/786 (13%)

Query: 131 PSQYTLDNVLRLCSLKGLLQR----------GEQFHGYAIKTCFDLNAFVVTGLVDMYAK 180
           P   +L  +L LC+   LLQ+           +  H   IK+    + +++  L+++Y+K
Sbjct: 4   PVPLSLSTLLELCT--NLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSK 61

Query: 181 CKCIFEAEYLFKMFP------------------------------DGKNHVAWTTMITGY 210
                 A  LF   P                                ++ V+WTTMI GY
Sbjct: 62  TGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGY 121

Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV 270
              G   KAI    DM  EG+E  QFT  ++L + AA    + G +VH  I+  G   NV
Sbjct: 122 KNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNV 181

Query: 271 YVQSALIDMYAKCGD-------------------------------LDSARRLLEYSEID 299
            V ++L++MYAKCGD                               +D A    E     
Sbjct: 182 SVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAER 241

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARD--IKIDDFTYPSVLNCFASNIDLNNAKS 357
           + V+WNSMI GF ++G+   AL +F KM  RD  +  D FT  SVL+  A+   L   K 
Sbjct: 242 DIVTWNSMISGFNQRGYDLRALDIFSKM-LRDSLLSPDRFTLASVLSACANLEKLCIGKQ 300

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYA---------------------------------KQ 384
           +HS IV TGF+    V NALI MY+                                 K 
Sbjct: 301 IHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKL 360

Query: 385 GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
           G+++ A  +F  ++D+DV++WT++I G   HGSY EA+  F  M   G  P+   ++++L
Sbjct: 361 GDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAML 420

Query: 445 SACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH-TRDV 503
           S  + L  L  G+Q+H   +KSG   S+SV N+L+ +YAK G I  A+R FD +   RD 
Sbjct: 421 SVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDT 480

Query: 504 ITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFES 563
           ++WT++I+  AQ+G  +EAL+ ++ ML  G +PD+IT+VG+  AC+HAGL    R YF+ 
Sbjct: 481 VSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDM 540

Query: 564 MDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
           M  V  I P   HYACM+DL GR+G L EA+  +++M  EPD   W +LLSACRVH +++
Sbjct: 541 MKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNID 600

Query: 624 LGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETN 683
           LG+ AA  L  LEP N+  Y  L+N+YS  GKWE+AA++RK MK   ++KE G SW+E  
Sbjct: 601 LGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVK 660

Query: 684 SQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSE 743
            +VH+F  ED  HP + +IY  + +I   IK+ GYVPD    LH++EEE KE  L +HSE
Sbjct: 661 HKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSE 720

Query: 744 KLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNC 803
           KLA+AFGL++ P    +RI KNLRVC DCHTA+K+IS +  R II+RD+ RFHHFK G C
Sbjct: 721 KLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFC 780

Query: 804 SCGDYW 809
           SC DYW
Sbjct: 781 SCRDYW 786



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 150/548 (27%), Positives = 258/548 (47%), Gaps = 98/548 (17%)

Query: 33  VKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE 92
           ++ A   N  L  +S  G++D   + F+++  RD  +W TMI  Y N G+  +A ++  +
Sbjct: 77  LRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGD 136

Query: 93  TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
                                          M  EG  P+Q+TL NVL   +    ++ G
Sbjct: 137 -------------------------------MVKEGIEPTQFTLTNVLASVAATRCMETG 165

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP----------------- 195
           ++ H + +K     N  V   L++MYAKC     A+++F                     
Sbjct: 166 KKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQV 225

Query: 196 -------------DGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSI 241
                          ++ V W +MI+G++Q GY  +A++ F  M R   +  ++FT  S+
Sbjct: 226 GQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASV 285

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE------- 294
           L+ACA +     G Q+H  I+++GF+ +  V +ALI MY++CG +++ARRL+E       
Sbjct: 286 LSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDL 345

Query: 295 -----------YSEIDNE---------------VSWNSMIVGFARQGFHKEALSLFKKMH 328
                      Y ++ +                V+W +MIVG+ + G + EA++LF+ M 
Sbjct: 346 KIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMV 405

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD 388
               + + +T  ++L+  +S   L++ K +H   VK+G      V+NALI MYAK GN+ 
Sbjct: 406 GGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNIT 465

Query: 389 CAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSAC 447
            A   F+L++ ++D +SWTS+I   A HG  EEAL+ F  M + G+ PDH+    + SAC
Sbjct: 466 SASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSAC 525

Query: 448 AELTVLEFGQQVHAVFLKSGG-CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVIT 505
               ++  G+Q   +         +LS    +V ++ + G + +A    + M    DV+T
Sbjct: 526 THAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVT 585

Query: 506 WTALIMGC 513
           W +L+  C
Sbjct: 586 WGSLLSAC 593



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 200/455 (43%), Gaps = 92/455 (20%)

Query: 8   ILNFSLRCRSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDG 67
           +LN   +C   ++    +   V   V+  S  N  +      G++D A   FE+M++RD 
Sbjct: 187 LLNMYAKCGDPMMAKFVFDRMV---VRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
            TWN+MI+                               G++  G D+ A ++F +M  +
Sbjct: 244 VTWNSMIS-------------------------------GFNQRGYDLRALDIFSKMLRD 272

Query: 128 G-YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
               P ++TL +VL  C+    L  G+Q H + + T FD++  V+  L+ MY++C  +  
Sbjct: 273 SLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVET 332

Query: 187 AEYL-------------FKMFPDG-------------------KNHVAWTTMITGYSQNG 214
           A  L             F    DG                   ++ VAWT MI GY Q+G
Sbjct: 333 ARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHG 392

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQS 274
              +AI  FR M   G   N +T  ++L+  +++++   G Q+HG  + SG   +V V +
Sbjct: 393 SYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSN 452

Query: 275 ALIDMYAKCGDLDSARRLLEYSEIDNE-VSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
           ALI MYAK G++ SA R  +    + + VSW SMI+  A+ G  +EAL LF+ M    ++
Sbjct: 453 ALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLR 512

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA------------LIDMY 381
            D  TY  V +              H+ +V  G + +  + +             ++D++
Sbjct: 513 PDHITYVGVFSA-----------CTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLF 561

Query: 382 AKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYH 415
            + G L  A      M  + DV++W SL++ C  H
Sbjct: 562 GRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVH 596


>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
 gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
          Length = 818

 Score =  530 bits (1366), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 287/810 (35%), Positives = 453/810 (55%), Gaps = 48/810 (5%)

Query: 43  LVDFSNSGEIDEAGQLFEKMS----DRDGFTWNTMIAAYANSGRLREAKKLFNETPFK-- 96
           L   S+ G++ E   L E++     +RD    N +I+ Y     L +A+ +F    ++  
Sbjct: 14  LCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQR 73

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
           N  +W+++I  Y+  G   EA  L+W+M L+G      T  +VL  CS    L +G + H
Sbjct: 74  NVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS---SLAQGREIH 130

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
                +  D    +   LV MYA+   + +A+ +F+     ++  +W  +I  +SQ+G  
Sbjct: 131 NRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQT-RDETSWNAVILAHSQSGDW 189

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
             A+  F++M+ + V+ N  T+ ++++  +       G ++H  I+++GF+ ++ V +AL
Sbjct: 190 SGALRIFKEMKCD-VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATAL 248

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           I+MY KCG    AR + +  +  + VSWN MI  +   G   EAL L++K+     K   
Sbjct: 249 INMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTK 308

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
            T+ S+L   +S   L   + VHS I++ G +    V  AL++MYAK G+L+ A  VFN 
Sbjct: 309 ATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNA 368

Query: 397 MQDKDVISWTSLITGCAYHGSYEE----------------------------------AL 422
           M+++D ++W++LI   A +G  ++                                  A+
Sbjct: 369 MKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAM 428

Query: 423 KYFSDMR-ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           K F +M   +G+ PD V   ++L ACA L  L   + +HA   +S   S++ V N+L+ +
Sbjct: 429 KIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINM 488

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           YA+CG + +A R+F +   + V++WTA++   +Q G+  EAL  + +M   G KPD +T+
Sbjct: 489 YARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTY 548

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
             +LF C+H G  E    YF  M +++ + P  DH+A M+DLLGRSG+L +AK LL+ M 
Sbjct: 549 TSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMP 608

Query: 602 GEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
            EPD   W   L+ACR+HG LELGE AA  ++EL+P +  PY+ +SN+Y+  G WE  A 
Sbjct: 609 FEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVAS 668

Query: 662 VRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPD 721
           VRK M+ RG++K PG S++E + ++H F S  + HP   +I  ++  +  L++ AGYVPD
Sbjct: 669 VRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPD 728

Query: 722 MNFALHNVEEEGKEIGLAYHSEKLAVAFGLL-TLPQGAPIRIFKNLRVCGDCHTAMKYIS 780
               LH+V E  KE  L YHSEK+A+AFGL+ +   G PIR+ KNLRVC DCHTA K+I+
Sbjct: 729 TKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIA 788

Query: 781 AVYLRHIILRDSNRFHHFKA-GNCSCGDYW 809
            +  R II+RD NRFH F + G CSCGDYW
Sbjct: 789 RIAGRDIIVRDCNRFHRFSSDGKCSCGDYW 818



 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 162/553 (29%), Positives = 285/553 (51%), Gaps = 20/553 (3%)

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           +P   T   VL  CS  G +  G   H     + F+ +  V   L+ MY KC  + +A  
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63

Query: 190 LFK-MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
           +F+ M    +N V+W  MI  Y+QNG+  +A+  +  M ++G+ ++  TF S+L AC+++
Sbjct: 64  VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
           +    G ++H  +  SG ++   + +AL+ MYA+ G +  A+R+ +  +  +E SWN++I
Sbjct: 124 AQ---GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVI 180

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
           +  ++ G    AL +FK+M   D+K +  TY +V++ F++   L   + +H+ IV  GF+
Sbjct: 181 LAHSQSGDWSGALRIFKEMKC-DVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFD 239

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
               V  ALI+MY K G+   A  VF+ M+ +D++SW  +I     +G + EAL+ +  +
Sbjct: 240 TDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKL 299

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
            + G         SIL AC+ +  L  G+ VH+  L+ G  S ++V  +LV +YAKCG +
Sbjct: 300 DMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSL 359

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKE---ALQFYDQMLARGTKPDYITFVGLL 545
            +A +VF++M  RD + W+ LI   A NG GK+   A + +D++ +R    D I++  ++
Sbjct: 360 EEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSR----DTISWNAMI 415

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG--- 602
                 G A  A   F  M    G+KP    +  +++     G+L E KAL  Q+     
Sbjct: 416 TTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESEL 475

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLF-ELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
           E +  V   L++     G LE  ER    LF   +    + +  +   +S  G++ +A  
Sbjct: 476 ESNVVVTNTLINMYARCGSLEEAER----LFAAAKEKTVVSWTAMVAAFSQYGRYAEALD 531

Query: 662 VRKLMKSRGIRKE 674
           + + M   G++ +
Sbjct: 532 LFQEMDLEGVKPD 544



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 151/295 (51%), Gaps = 10/295 (3%)

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
           D + D+ T+ +VL   +S  D+   +++H  I  + FE    V NALI MY K  +L  A
Sbjct: 2   DRQPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDA 61

Query: 391 FMVFNLM--QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
             VF  M  + ++V+SW ++I   A +G   EAL  +  M + G+  DHV   S+L AC+
Sbjct: 62  RSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS 121

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
            L     G+++H     SG  S  S+ N+LV +YA+ G + DA R+F S+ TRD  +W A
Sbjct: 122 SLAQ---GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNA 178

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG-LAENARWYFESMDKV 567
           +I+  +Q+G    AL+ + +M     KP+  T++ ++   S    L E  + + E +   
Sbjct: 179 VILAHSQSGDWSGALRIFKEMKC-DVKPNSTTYINVISGFSTPEVLPEGRKIHAEIV--A 235

Query: 568 YGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDL 622
            G          +I++ G+ G   EA+ + D+M  + D   W  ++    ++GD 
Sbjct: 236 NGFDTDLVVATALINMYGKCGSSHEAREVFDKM-KKRDMVSWNVMIGCYVLNGDF 289


>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
 gi|238013832|gb|ACR37951.1| unknown [Zea mays]
 gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
          Length = 745

 Score =  530 bits (1366), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 269/676 (39%), Positives = 397/676 (58%), Gaps = 34/676 (5%)

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
           N F    L+   A  + + + + LF      ++ V++  +I G+S  G   +A+  +  +
Sbjct: 71  NLFTYNALLSTLAHARLLDDMDSLFASMAQ-RDTVSYNAVIAGFSGGGAHARAVRLYHTL 129

Query: 227 RVEG--VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK-- 282
              G  V  ++ T  +++ A +A+  R  G Q H  IL  GF  N +V S L+ MYAK  
Sbjct: 130 LRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMG 189

Query: 283 -----------------------------CGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
                                        C  ++ ARRL E     + ++W +M+ GF +
Sbjct: 190 LIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQ 249

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
            G   +AL+ F++M  + I ID +T+ S+L    +   L   K +H+ I++T ++   FV
Sbjct: 250 NGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFV 309

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
            +AL+DMY+K  ++  A   F  M  K++ISWT+LI G   +G  EEA++ FS+M+  GI
Sbjct: 310 GSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGI 369

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
            PD   + S++S+CA L  LE G Q H + L SG    ++V N+LV +Y KCG I DA+R
Sbjct: 370 DPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHR 429

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGL 553
           +FD M   D ++WTAL+ G AQ G+ KE +  +++MLA+  KPD +TF+G+L ACS AG 
Sbjct: 430 LFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGF 489

Query: 554 AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
            E    YF SM K +GI P  DHY CMIDL  RSG+L EA+  + QM   PDA  W  LL
Sbjct: 490 VEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLL 549

Query: 614 SACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRK 673
           SACR+ GD+E+G+ AA NL E++P N   YV L +M++T G W   A++R+ M+ R ++K
Sbjct: 550 SACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKK 609

Query: 674 EPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEG 733
           EPGCSW++  ++VHIF ++D+ HP    IY K++ +   + E GY PD++  LH+V +  
Sbjct: 610 EPGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTD 669

Query: 734 KEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSN 793
           K   +++HSEKLA+AFGL+ +P   PIRI KNLRVC DCH A K IS +  R I++RD+ 
Sbjct: 670 KVHMVSHHSEKLAIAFGLMFVPHEMPIRIVKNLRVCVDCHNATKLISKITGRDILVRDAV 729

Query: 794 RFHHFKAGNCSCGDYW 809
           RFH F  G CSCGD+W
Sbjct: 730 RFHKFSNGVCSCGDFW 745



 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 174/575 (30%), Positives = 279/575 (48%), Gaps = 73/575 (12%)

Query: 35  PASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP 94
           P   LN  L  +  +G    A ++F+     + FT+N +++  A++  L +   LF    
Sbjct: 40  PTHLLNHLLTAYGKAGRHARARRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMA 99

Query: 95  FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG--YRPSQYTLDNVLRLCSLKGLLQRG 152
            ++  +++++I G+S  G    A  L+  +   G   RPS+ T+  ++   S  G    G
Sbjct: 100 QRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALG 159

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAK-------------------------------C 181
            QFH   ++  F +NAFV + LV MYAK                               C
Sbjct: 160 RQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRC 219

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
           K + EA  LF++  D ++ + WTTM+TG++QNG   +A+  FR MR +G+  +Q+TF SI
Sbjct: 220 KMVEEARRLFEVMTD-RDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSI 278

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           LTAC A+SA + G Q+H  I+ + ++ NV+V SAL+DMY+KC  +  A          N 
Sbjct: 279 LTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNI 338

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           +SW ++IVG+ + G  +EA+ +F +M    I  DDFT  SV++  A+   L      H L
Sbjct: 339 ISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCL 398

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
            + +G   Y  V+NAL+ +Y K G+++ A  +F+ M   D +SWT+L+TG A  G  +E 
Sbjct: 399 ALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKET 458

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS---SLSVDNSL 478
           +  F  M    + PD V    +LSAC+    +E             GCS   S+  D+ +
Sbjct: 459 IDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVE------------KGCSYFHSMQKDHGI 506

Query: 479 VLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDY 538
           V +     C+ D       +++R              +G+ KEA +F  QM      PD 
Sbjct: 507 VPIDDHYTCMID-------LYSR--------------SGRLKEAEEFIKQM---PMHPDA 542

Query: 539 ITFVGLLFACSHAGLAENARWYFESMDKVYGIKPG 573
           I +  LL AC   G  E  +W  E++ ++    P 
Sbjct: 543 IGWGTLLSACRLRGDMEIGQWAAENLLEIDPQNPA 577


>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Brachypodium distachyon]
          Length = 750

 Score =  530 bits (1365), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 275/677 (40%), Positives = 403/677 (59%), Gaps = 40/677 (5%)

Query: 170 VVTG--LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA----IECF 223
           +VTG  L+   A+   + + E LF   P  ++ V++  ++ G+S+ G   +A    +   
Sbjct: 77  LVTGNSLLSALARAGLVRDMERLFTSLPQ-RDAVSYNALLAGFSRAGAHARAAGAYVALL 135

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
           RD    GV  ++ T   ++   +A+  R  G QVH  IL  GF A  +  S L+DMYAK 
Sbjct: 136 RDE--AGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKV 193

Query: 284 GDLDSARR-------------------------------LLEYSEIDNEVSWNSMIVGFA 312
           G +  ARR                               L E  E  + ++W +M+ G  
Sbjct: 194 GPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLT 253

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
           + G   EAL +F++M A  + ID +T+ S+L    +   L   K +H+ I +T +E   F
Sbjct: 254 QNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVF 313

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           V +AL+DMY+K  ++  A  VF  M  K++ISWT++I G   +G  EEA++ FS+M+  G
Sbjct: 314 VGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDG 373

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
           I PD   + S++S+CA L  LE G Q H + L SG    ++V N+LV +Y KCG I DA+
Sbjct: 374 IKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAH 433

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
           R+FD M   D ++WTAL+MG AQ GK KE +  +++ML++G KPD +TF+G+L ACS +G
Sbjct: 434 RLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSG 493

Query: 553 LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
           L +  R YF SM + + I P  DHY CMIDL  RSG L +A+  + QM   PDA  W  L
Sbjct: 494 LVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATL 553

Query: 613 LSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIR 672
           LSACR+ GD+E+G+ AA NL +L+P N   YV L +M+++ G+W D A++R+ M+ R ++
Sbjct: 554 LSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVK 613

Query: 673 KEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEE 732
           KEPGCSW++  ++VHIF ++D+ HP    IY K+  +   + E GY PD++  LH+V + 
Sbjct: 614 KEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKMVEEGYKPDVSSVLHDVADA 673

Query: 733 GKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDS 792
            K   L++HSEKLA+AFGL+ +P   PIRI KNLRVC DCH A K+IS +  R I++RD+
Sbjct: 674 EKVHMLSHHSEKLAIAFGLIFVPPEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDA 733

Query: 793 NRFHHFKAGNCSCGDYW 809
            RFH F  G CSCGD+W
Sbjct: 734 VRFHKFSNGICSCGDFW 750



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 124/380 (32%), Positives = 212/380 (55%), Gaps = 4/380 (1%)

Query: 43  LVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTW 101
           LVD ++  G I +A ++F++M  ++    NTMI        + EA+ LF     ++  TW
Sbjct: 186 LVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITW 245

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIK 161
           ++++ G +  GL+ EA ++F +M+ EG    QYT  ++L  C     L+ G+Q H Y  +
Sbjct: 246 TTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITR 305

Query: 162 TCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIE 221
           TC++ N FV + LVDMY+KC+ +  AE +F+     KN ++WT MI GY QNG G +A+ 
Sbjct: 306 TCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMM-WKNIISWTAMIVGYGQNGCGEEAVR 364

Query: 222 CFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYA 281
            F +M+ +G++ + FT  S++++CA +++ + GAQ H   L SG    V V +AL+ +Y 
Sbjct: 365 VFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYG 424

Query: 282 KCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPS 341
           KCG ++ A RL +     ++VSW ++++G+A+ G  KE + LF+KM ++ +K D  T+  
Sbjct: 425 KCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIG 484

Query: 342 VLNCFASNIDLNNAKS-VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD- 399
           VL+  + +  ++  +S  HS+               +ID+Y++ G L  A      M   
Sbjct: 485 VLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRC 544

Query: 400 KDVISWTSLITGCAYHGSYE 419
            D   W +L++ C   G  E
Sbjct: 545 PDAFGWATLLSACRLRGDME 564



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 113/267 (42%), Gaps = 38/267 (14%)

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
           +L   NSL+   A+ G + D  R+F S+  RD +++ AL+ G ++ G    A   Y  +L
Sbjct: 76  NLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALL 135

Query: 531 --ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKV----YGIKPGPDHYACMIDLL 584
               G +P  IT  G++   S  G     R     + ++    Y     P     ++D+ 
Sbjct: 136 RDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSP-----LVDMY 190

Query: 585 GRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA-ANNLFE-LEPMNAMP 642
            + G + +A+ + D+M G+        ++    + G L     A A  LFE +E  +++ 
Sbjct: 191 AKVGPIGDARRVFDEMEGK------NVVMCNTMITGLLRCKMVAEARALFEAIEERDSIT 244

Query: 643 YVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEP-----------GCSWVETNSQVHIFIS 691
           +  +    +  G   +A  V + M++ G+  +              + +E   Q+H +I+
Sbjct: 245 WTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYIT 304

Query: 692 ----EDR---GHPLRTDIYSKIDEIML 711
               ED    G  L  D+YSK   + L
Sbjct: 305 RTCYEDNVFVGSAL-VDMYSKCRSVRL 330


>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  530 bits (1364), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 284/740 (38%), Positives = 433/740 (58%), Gaps = 8/740 (1%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL-EGYRP 131
           ++  YA+ G +  ++  F++   K+ +TW+S+I  Y   G   EA + F+Q+ L   ++ 
Sbjct: 114 LVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQA 173

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
             YT   VL+ C     L  G + H +  K  F  + FV   L+ MY++   +  A  LF
Sbjct: 174 DFYTFPPVLKACQT---LVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLF 230

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
              P  ++  +W  MI+G  QNG   +A++   +MR+EG+  +  T  SIL  CA +   
Sbjct: 231 DDMP-FRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDI 289

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
                +H  ++  G E  ++V +ALI+MYAK G+L  A+++ +   + + VSWNS+I  +
Sbjct: 290 STATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAY 349

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
            +      A   F KM    ++ D  T  S+ +  A + D  N++SVH  I++ G+    
Sbjct: 350 EQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEA 409

Query: 372 FV-NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR- 429
            V  NA++DMYAK G +D A  VFNL+  KDV+SW +LI+G   +G   EA++ +  M  
Sbjct: 410 VVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEE 469

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
              I  +     SIL+A A +  L+ G ++H   +K+     + V   L+ +Y KCG + 
Sbjct: 470 CREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLV 529

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
           DA  +F  +     + W A+I     +G G++AL+ + +M   G KPD++TF+ LL ACS
Sbjct: 530 DAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACS 589

Query: 550 HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
           H+GL +  +W+F  M + YGIKP   HY CM+DLLGR+G L  A   +  M   PDA++W
Sbjct: 590 HSGLVDEGKWFFHLMQE-YGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIW 648

Query: 610 KALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
            ALL ACR+HG++ELG+ A++ LFE++  N   YV LSN+Y+  GKWE   +VR L + R
Sbjct: 649 GALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARER 708

Query: 670 GIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNV 729
           G++K PG S +E N +V IF + ++ HP   +IY+++  +   +K  GY+PD +F L +V
Sbjct: 709 GLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTAKMKSLGYIPDYSFVLQDV 768

Query: 730 EEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIIL 789
           EE+ KE  L  HSE+LA+AFG+++ P  + IRIFKNLRVCGDCH A K+IS +  R I++
Sbjct: 769 EEDEKEHILTSHSERLAIAFGIISTPPKSAIRIFKNLRVCGDCHNATKFISRITEREIVV 828

Query: 790 RDSNRFHHFKAGNCSCGDYW 809
           RDS RFHHFK G CSCGDYW
Sbjct: 829 RDSKRFHHFKNGICSCGDYW 848



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 141/463 (30%), Positives = 239/463 (51%), Gaps = 17/463 (3%)

Query: 67  GFTWNTMIAA-----YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELF 121
           GF W+  +AA     Y+  G +  A+ LF++ PF++  +W+++I G    G   +A ++ 
Sbjct: 202 GFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVL 261

Query: 122 WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
            +M+LEG      T+ ++L +C+  G +      H Y IK   +   FV   L++MYAK 
Sbjct: 262 DEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKF 321

Query: 182 KCIFEAEYLF-KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
             + +A+ +F +MF   ++ V+W ++I  Y QN     A   F  M++ G+E +  T  S
Sbjct: 322 GNLGDAQKVFQQMFL--RDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVS 379

Query: 241 ILTACAAVSARDF--GAQVHGCILSSGF--EANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           +  A  A  +RD+     VHG I+  G+  EA V + +A++DMYAK G +DSA ++    
Sbjct: 380 L--ASIAAQSRDYKNSRSVHGFIMRRGWLMEA-VVIGNAVMDMYAKLGVIDSAHKVFNLI 436

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA-RDIKIDDFTYPSVLNCFASNIDLNNA 355
            + + VSWN++I G+ + G   EA+ +++ M   R+IK++  T+ S+L  +A    L   
Sbjct: 437 PVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQG 496

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
             +H  ++KT      FV   LID+Y K G L  A  +F  +  +  + W ++I+    H
Sbjct: 497 MRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIH 556

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G  E+ALK F +M+  G+ PDHV   S+LSAC+   +++ G+    +  + G   SL   
Sbjct: 557 GHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHY 616

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNG 517
             +V +  + G +  A      M    D   W AL+  C  +G
Sbjct: 617 GCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHG 659



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 213/447 (47%), Gaps = 30/447 (6%)

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
           +  ++ +  F S+  +C          ++H  ++ SG   + ++   L+++YA  GD+  
Sbjct: 70  QPAKNEEIDFNSLFDSCTKTL---LAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSL 126

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK-MHARDIKIDDFTYPSVLNCFA 347
           +R   +  +  +  +WNSMI  + R G  +EA+  F + +     + D +T+P VL    
Sbjct: 127 SRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQ 186

Query: 348 SNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTS 407
           + +D    + +H  + K GF+   FV  +LI MY++ G +  A  +F+ M  +D+ SW +
Sbjct: 187 TLVD---GRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNA 243

Query: 408 LITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG 467
           +I+G   +G+  +AL    +MR+ GI  D V V+SIL  CA+L  +     +H   +K G
Sbjct: 244 MISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHG 303

Query: 468 GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYD 527
               L V N+L+ +YAK G + DA +VF  M  RDV++W ++I    QN     A  F+ 
Sbjct: 304 LEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFF 363

Query: 528 QMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPGPDHYACMI---- 581
           +M   G +PD +T V L      A +A  +R Y  S   V+G  ++ G    A +I    
Sbjct: 364 KMQLNGLEPDLLTLVSL------ASIAAQSRDYKNSR-SVHGFIMRRGWLMEAVVIGNAV 416

Query: 582 -DLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELE---- 636
            D+  + G +  A  + + ++   D   W  L+S    +G   L   A      +E    
Sbjct: 417 MDMYAKLGVIDSAHKVFN-LIPVKDVVSWNTLISGYTQNG---LASEAIEVYRMMEECRE 472

Query: 637 -PMNAMPYVQLSNMYSTAGKWEDAARV 662
             +N   +V +   Y+  G  +   R+
Sbjct: 473 IKLNQGTWVSILAAYAHVGALQQGMRI 499



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 156/323 (48%), Gaps = 17/323 (5%)

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
           AK +H+L+V +G     F++  L+++YA  G++  +   F+ +Q KDV +W S+I+    
Sbjct: 92  AKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVR 151

Query: 415 HGSYEEALK-YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
           +G + EA+  ++  + ++    D      +L AC  L     G+++H    K G    + 
Sbjct: 152 NGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD---GRKIHCWVFKLGFQWDVF 208

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
           V  SL+ +Y++ G +  A  +FD M  RD+ +W A+I G  QNG   +AL   D+M   G
Sbjct: 209 VAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 268

Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA----CMIDLLGRSGK 589
              D +T   +L  C+  G    A     ++  +Y IK G +        +I++  + G 
Sbjct: 269 INMDSVTVASILPVCAQLGDISTA-----TLIHLYVIKHGLEFELFVSNALINMYAKFGN 323

Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHGD--LELGERAANNLFELEPMNAMPYVQLS 647
           L +A+ +  QM    D   W ++++A   + D     G      L  LEP + +  V L+
Sbjct: 324 LGDAQKVFQQMFLR-DVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEP-DLLTLVSLA 381

Query: 648 NMYSTAGKWEDAARVRKLMKSRG 670
           ++ + +  ++++  V   +  RG
Sbjct: 382 SIAAQSRDYKNSRSVHGFIMRRG 404



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 51/100 (51%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G L +     D F    +I  Y   GRL +A  LF + P ++   W+++I  +  +G   
Sbjct: 501 GHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGE 560

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
           +A +LF +MQ EG +P   T  ++L  CS  GL+  G+ F
Sbjct: 561 KALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWF 600


>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
 gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
          Length = 736

 Score =  530 bits (1364), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 275/740 (37%), Positives = 430/740 (58%), Gaps = 12/740 (1%)

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
           Y   G + +A  +F+     N  +W+ ++  ++  G   EA   + +M LEG RP     
Sbjct: 2   YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61

Query: 137 DNVLRLCSLKGLLQRGEQFHGYAIKT-CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
              + +CS    L++G+  H   ++T   + +  + T L+ MYA+C+ +  A   F    
Sbjct: 62  VVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMG 121

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDM---RVEGVESNQFTFPSILTACAAVSARD 252
             K  V W  +I GYS+NG    A++ ++DM     EG++ +  TF S L AC  V    
Sbjct: 122 K-KTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G ++    ++SG+ ++  VQ+ALI+MY+KCG L+SAR++ +  +  + ++WN+MI G+A
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
           +QG   +AL LF++M   D K +  T+  +L    +  DL   +++H  + + G+E    
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLV 300

Query: 373 VNNALIDMYAK-QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
           + N L++MY K   +L+ A  VF  M+ +DVI+W  LI     +G  ++AL  F  M++ 
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCIND 490
            + P+ + +S++LSACA L     G+ VHA  + SG C + + ++NSL+ +Y +CG ++D
Sbjct: 361 NVAPNEITLSNVLSACAVLGAKRQGKAVHA-LIASGRCKADVVLENSLMNMYNRCGSLDD 419

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
              VF ++  + +++W+ LI   AQ+G  +  L+ + ++L  G   D +T V  L ACSH
Sbjct: 420 TVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSH 479

Query: 551 AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
            G+ +     F SM   +G+ P   H+ CM+DLL R+G+L  A+ L+  M   PDA  W 
Sbjct: 480 GGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWT 539

Query: 611 ALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ-LSNMYSTAGKWEDAARVRKLMKSR 669
           +LLS C++H D +   R A+ LFELE  +    V  LSN+Y+ AG+W+D   VRK    R
Sbjct: 540 SLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDD---VRKTRNRR 596

Query: 670 GIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNV 729
             RK PGCS++E N  VH F++ D+ HP    I ++I  +   +K+AGYVPDM   LHNV
Sbjct: 597 AARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNV 656

Query: 730 EEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIIL 789
           +EE KE  L YHSEKLA+A+GL++ P G P+ I KNLR C DCH A K+IS +  R I++
Sbjct: 657 KEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVV 716

Query: 790 RDSNRFHHFKAGNCSCGDYW 809
           RDS RFHHF+ G+CSC DYW
Sbjct: 717 RDSTRFHHFENGSCSCKDYW 736



 Score =  235 bits (600), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 146/518 (28%), Positives = 263/518 (50%), Gaps = 13/518 (2%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS 109
           G++  A  L  ++ + D      +I  YA    L  A+K F+E   K   TW++LI GYS
Sbjct: 77  GQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYS 136

Query: 110 NYGLDIEAFELFWQM---QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDL 166
             G    A +++  M     EG +P   T  + L  C++ G + +G +     + + +  
Sbjct: 137 RNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYAS 196

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
           ++ V   L++MY+KC  +  A  +F    + ++ +AW TMI+GY++ G   +A+E F+ M
Sbjct: 197 DSIVQNALINMYSKCGSLESARKVFDRLKN-RDVIAWNTMISGYAKQGAATQALELFQRM 255

Query: 227 RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC-GD 285
                + N  TF  +LTAC  +   + G  +H  +   G+E+++ + + L++MY KC   
Sbjct: 256 GPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSS 315

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           L+ AR++ E     + ++WN +IV + + G  K+AL +FK+M   ++  ++ T  +VL+ 
Sbjct: 316 LEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSA 375

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
            A        K+VH+LI     +    + N+L++MY + G+LD    VF  ++DK ++SW
Sbjct: 376 CAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSW 435

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
           ++LI   A HG     L++F ++   G+  D V + S LSAC+   +L+ G Q    FL 
Sbjct: 436 STLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQ---TFLS 492

Query: 466 SGGCSSLSVDNS----LVLVYAKCGCINDA-NRVFDSMHTRDVITWTALIMGCAQNGKGK 520
             G   L+ D      +V + ++ G +  A N + D     D + WT+L+ GC  +   K
Sbjct: 493 MVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTK 552

Query: 521 EALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENAR 558
            A +  D++    ++ ++ T   L    + AG  ++ R
Sbjct: 553 RAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVR 590



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 94/284 (33%), Positives = 155/284 (54%), Gaps = 4/284 (1%)

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
           MY KCG +  A  +    E  N VSW  ++  FAR G ++EAL  +++M    ++ D   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV-NNALIDMYAKQGNLDCAFMVFNLM 397
           +   +   +S+ DL   + +H++I++T    +  +   ALI MYA+  +L+ A   F+ M
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDM---RISGICPDHVVVSSILSACAELTVLE 454
             K +++W +LI G + +G +  ALK + DM      G+ PD +  SS L AC  +  + 
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180

Query: 455 FGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCA 514
            G+++ A  + SG  S   V N+L+ +Y+KCG +  A +VFD +  RDVI W  +I G A
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 515 QNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENAR 558
           + G   +AL+ + +M     KP+ +TF+GLL AC++    E  R
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGR 284



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 129/260 (49%), Gaps = 10/260 (3%)

Query: 380 MYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVV 439
           MY K G++  A  VF+ ++  + +SWT ++   A +G Y EAL Y+  M + G+ PD  +
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 440 VSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAKCGCINDANRVFDSM 498
               +  C+    L+ GQ +HA+ L++      + +  +L+ +YA+C  +  A + FD M
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR---GTKPDYITFVGLLFACSHAGLAE 555
             + ++TW ALI G ++NG  + AL+ Y  M+++   G KPD ITF   L+AC+  G   
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180

Query: 556 NARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
             R   E+     G          +I++  + G L  A+ + D++    D   W  ++S 
Sbjct: 181 QGR-EIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNR-DVIAWNTMISG 238

Query: 616 CRVHG----DLELGERAANN 631
               G     LEL +R   N
Sbjct: 239 YAKQGAATQALELFQRMGPN 258



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 138/301 (45%), Gaps = 34/301 (11%)

Query: 49  SGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY 108
           S  ++EA Q+FE+M  RD  TWN +I AY   G+ +                        
Sbjct: 313 SSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAK------------------------ 348

Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA 168
                  +A ++F QMQLE   P++ TL NVL  C++ G  ++G+  H          + 
Sbjct: 349 -------DALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADV 401

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
            +   L++MY +C  + +   +F    D K+ V+W+T+I  Y+Q+G+    +E F ++  
Sbjct: 402 VLENSLMNMYNRCGSLDDTVGVFAAIRD-KSLVSWSTLIAAYAQHGHSRTGLEHFWELLQ 460

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLD 287
           EG+ ++  T  S L+AC+       G Q    ++   G   +      ++D+ ++ G L+
Sbjct: 461 EGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLE 520

Query: 288 SARRLL-EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCF 346
           +A  L+ +   + + V+W S++ G       K A  +  K+   + + +  T   + N +
Sbjct: 521 AAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVY 580

Query: 347 A 347
           A
Sbjct: 581 A 581


>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  530 bits (1364), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 261/658 (39%), Positives = 403/658 (61%), Gaps = 3/658 (0%)

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP--DGKNHVAWTTMITGYS 211
           + H + IKT   L   V   L++  A        +Y   +F   D  +  A+  MI G++
Sbjct: 42  EIHAHLIKTRLLLKPKVAENLLE-SAAILLPTSMDYAVSIFRQIDEPDSPAYNIMIRGFT 100

Query: 212 QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVY 271
                 +AI  F++M    V+ ++FTFP IL  C+ + A   G Q+H  I+  GF ++ +
Sbjct: 101 LKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGF 160

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD 331
           V++ LI MYA CG+++ ARR+ +     N  +WNSM  G+ + G  +E + LF +M   D
Sbjct: 161 VKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELD 220

Query: 332 IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
           I+ D+ T  SVL       DL   + ++  + + G +G   +  +L+DMYAK G +D A 
Sbjct: 221 IRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTAR 280

Query: 392 MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELT 451
            +F+ M  +DV++W+++I+G +      EAL  F +M+ + I P+ + + SILS+CA L 
Sbjct: 281 RLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLG 340

Query: 452 VLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIM 511
            LE G+ VH    K     ++++  +L+  YAKCG +  +  VF  M  ++V++WT LI 
Sbjct: 341 ALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQ 400

Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIK 571
           G A NG+GK+AL+++  ML +  +P+ +TF+G+L ACSHAGL +  R  F SM + +GI+
Sbjct: 401 GLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIE 460

Query: 572 PGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANN 631
           P  +HY CM+D+LGR+G + EA   +  M  +P+A +W+ LL++C+VH ++E+GE +   
Sbjct: 461 PRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQ 520

Query: 632 LFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFIS 691
           L  LEP ++  Y+ LSN+Y++ G+WEDA +VR  MK +GI+K PGCS +E +  +H F +
Sbjct: 521 LIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFA 580

Query: 692 EDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGL 751
           ED  H    +IY+ I+++M  IK AGYVP+   A  + EE+ KE  +++HSEKLA+AFGL
Sbjct: 581 EDNVHSQSEEIYNAIEDMMKQIKSAGYVPNTAEARLDAEEDDKESSVSHHSEKLAIAFGL 640

Query: 752 LTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +  P G  IRI KNLRVC DCH A K +S V+ R I++RD  RFHHFK G+CSC DYW
Sbjct: 641 IKSPPGTTIRITKNLRVCTDCHNATKLVSKVFNREIVVRDRTRFHHFKEGSCSCNDYW 698



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 227/444 (51%), Gaps = 6/444 (1%)

Query: 86  AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL 145
           A  +F +    +   ++ +I G++      EA  LF +M     +P ++T   +L++CS 
Sbjct: 77  AVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSR 136

Query: 146 KGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTT 205
              L  GEQ H   +K  F  + FV   L+ MYA C  +  A  +F    + +N   W +
Sbjct: 137 LQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSE-RNVRTWNS 195

Query: 206 MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
           M  GY+++G   + ++ F +M    +  ++ T  S+LTAC  ++  + G  ++  +   G
Sbjct: 196 MFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKG 255

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
            + N  + ++L+DMYAKCG +D+ARRL +  +  + V+W++MI G+++    +EAL LF 
Sbjct: 256 LKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFH 315

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           +M   +I  ++ T  S+L+  A    L   K VH  I K   +    +  AL+D YAK G
Sbjct: 316 EMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCG 375

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
           +++ +  VF  M  K+V+SWT LI G A +G  ++AL+YF  M    + P+ V    +LS
Sbjct: 376 SVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLS 435

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDSMHTR-DV 503
           AC+   +++ G+ +     +  G    +     +V +  + G I +A +   +M  + + 
Sbjct: 436 ACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNA 495

Query: 504 ITWTALIMGCAQNGK---GKEALQ 524
           + W  L+  C  +     G+E+L+
Sbjct: 496 VIWRTLLASCKVHKNVEIGEESLK 519



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 223/439 (50%), Gaps = 9/439 (2%)

Query: 67  GFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL 126
           GF  NT+I  YAN G +  A+++F+E   +N  TW+S+  GY+  G   E  +LF +M  
Sbjct: 159 GFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLE 218

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
              R  + TL +VL  C     L+ GE  + Y  +     N  ++T LVDMYAKC  +  
Sbjct: 219 LDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDT 278

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A  LF    D ++ VAW+ MI+GYSQ     +A++ F +M+   ++ N+ T  SIL++CA
Sbjct: 279 ARRLFDQM-DRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCA 337

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            + A + G  VH  I     +  V + +AL+D YAKCG ++S+  +     + N +SW  
Sbjct: 338 VLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTV 397

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH-SLIVKT 365
           +I G A  G  K+AL  F  M  ++++ +D T+  VL+  +    ++  + +  S+    
Sbjct: 398 LIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDF 457

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFM-VFNLMQDKDVISWTSLITGCAYHGSY---EEA 421
           G E        ++D+  + G ++ AF  + N+    + + W +L+  C  H +    EE+
Sbjct: 458 GIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEES 517

Query: 422 LKYFSDMRISGICPDHVVVSSILSACA--ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
           LK    +  +    D++++S+I ++    E  +   G+       K+ GCS + +D  + 
Sbjct: 518 LKQLIILEPTH-SGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIELDGVIH 576

Query: 480 LVYAKCGCINDANRVFDSM 498
             +A+    + +  +++++
Sbjct: 577 EFFAEDNVHSQSEEIYNAI 595



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 133/288 (46%), Gaps = 37/288 (12%)

Query: 24  RYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGR 82
           RY    G    P   L  +LVD ++  G++D A +LF++M  RD   W+ MI+ Y+ + R
Sbjct: 249 RYVEEKGLKGNPT--LITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASR 306

Query: 83  LREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRL 142
            R                               EA +LF +MQ     P++ T+ ++L  
Sbjct: 307 CR-------------------------------EALDLFHEMQKANIDPNEITMVSILSS 335

Query: 143 CSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVA 202
           C++ G L+ G+  H +  K    L   + T L+D YAKC  +  +  +F   P  KN ++
Sbjct: 336 CAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMP-VKNVLS 394

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
           WT +I G + NG G KA+E F  M  + VE N  TF  +L+AC+     D G  +   + 
Sbjct: 395 WTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMS 454

Query: 263 SS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
              G E  +     ++D+  + G ++ A + ++   I  N V W +++
Sbjct: 455 RDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLL 502


>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 796

 Score =  530 bits (1364), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 273/751 (36%), Positives = 436/751 (58%), Gaps = 13/751 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  NT++AAY   G    A++L +E P  N  +++ LI  YS  G    + E F + +  
Sbjct: 50  FLRNTLLAAYCRLGG--HARRLLDEMPRTNAVSFNLLIDAYSRAGQPEASLETFARARRS 107

Query: 128 -GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
            G R  ++T    L  CS  G L+ G+  H  ++        FV   LV MYA+C  + +
Sbjct: 108 AGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQ 167

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A  +F    D ++ V+W  +++GY + G     +  F  MR  G+  N F   S++  CA
Sbjct: 168 ARQVFDA-ADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCA 226

Query: 247 AV--SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
                  D  A VHGC++ +GF+++V++ SA++ MYAK G L  A  L +     N V +
Sbjct: 227 GSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVF 286

Query: 305 NSMIVGFARQ------GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
           N+MI G  R          +EALSL+ ++ +R ++  +FT+ SV+       D+   K +
Sbjct: 287 NAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQI 346

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           H  ++K  F+G  F+ +ALID+Y   G ++  F  F  +  +DV++WT++I+GC  +  +
Sbjct: 347 HGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELF 406

Query: 419 EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSL 478
           E AL  F ++  +G+ PD   +SS+++ACA L V   G+Q+     KSG     ++ NS 
Sbjct: 407 ERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSC 466

Query: 479 VLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDY 538
           + +YA+ G ++ A R F  M + D+++W+A+I   AQ+G  ++AL+F+++M+     P+ 
Sbjct: 467 IHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNE 526

Query: 539 ITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLD 598
           ITF+G+L ACSH GL +    Y+E+M + Y + P   H  C++DLLGR+G+L +A+A + 
Sbjct: 527 ITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIR 586

Query: 599 QMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWED 658
             +   +  +W++LL++CR+H D+E G+  A+ + EL+P ++  YV L N+Y  AG+   
Sbjct: 587 DSIFHDEPVIWRSLLASCRIHRDMERGQLVADRIMELQPSSSASYVNLYNIYLDAGELSL 646

Query: 659 AARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGY 718
           A+++R +MK RG++KEPG SW+E  S VH F++ D+ HP    IYSK+ E++  I +   
Sbjct: 647 ASKIRDVMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYSKLAEMLSKIDKL-T 705

Query: 719 VPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKY 778
             D +    +     ++  + +HSEKLAVA GL+ LPQ APIR+ KNLRVC DCH  MK 
Sbjct: 706 ATDASSTKSDDTIRNEQSWMNWHSEKLAVALGLIHLPQSAPIRVMKNLRVCRDCHLTMKL 765

Query: 779 ISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           IS    R I+LRD+ RFHHF+ G+CSC DYW
Sbjct: 766 ISKSEKREIVLRDAIRFHHFRDGSCSCADYW 796



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 141/585 (24%), Positives = 267/585 (45%), Gaps = 58/585 (9%)

Query: 43  LVD-FSNSGEIDEAGQLFEKMSDRDG-----FTWNTMIAAYANSGRLRE----------- 85
           L+D +S +G+ + + + F +     G     FT+   +AA + +GRLRE           
Sbjct: 84  LIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLE 143

Query: 86  ------------------------AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELF 121
                                   A+++F+    ++  +W++L+ GY   G   +   +F
Sbjct: 144 GIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVF 203

Query: 122 WQMQLEGYRPSQYTLDNVLRLC--SLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYA 179
             M+  G   + + L +V++ C  S   ++      HG  +K  FD + F+ + +V MYA
Sbjct: 204 AMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYA 263

Query: 180 KCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF------KAIECFRDMRVEGVES 233
           K   + EA  LFK   D  N V +  MI G  ++          +A+  + +++  G+E 
Sbjct: 264 KKGALSEAVALFKSVLD-PNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEP 322

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
            +FTF S++ AC      +FG Q+HG +L   F+ + ++ SALID+Y   G ++   R  
Sbjct: 323 TEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCF 382

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
                 + V+W +MI G  +    + AL+LF ++    +K D FT  SV+N  AS     
Sbjct: 383 TSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVAR 442

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
             + +     K+GF  +  + N+ I MYA+ G++  A   F  M+  D++SW+++I+  A
Sbjct: 443 TGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHA 502

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SL 472
            HG   +AL++F++M  + + P+ +    +L+AC+   +++ G + +    +    S ++
Sbjct: 503 QHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTI 562

Query: 473 SVDNSLVLVYAKCGCINDANR-VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM-- 529
                +V +  + G + DA   + DS+   + + W +L+  C  +   +      D++  
Sbjct: 563 KHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHRDMERGQLVADRIME 622

Query: 530 LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
           L   +   Y+    +        LA   R     + K  G+K  P
Sbjct: 623 LQPSSSASYVNLYNIYLDAGELSLASKIR----DVMKERGVKKEP 663



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 5/157 (3%)

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK 518
           VHA  +++    SL + N+L+  Y + G    A R+ D M   + +++  LI   ++ G+
Sbjct: 36  VHAHIVRAHPSPSLFLRNTLLAAYCRLG--GHARRLLDEMPRTNAVSFNLLIDAYSRAGQ 93

Query: 519 GKEALQ-FYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY 577
            + +L+ F     + G + D  T+   L ACS AG     +    ++  + GI  G    
Sbjct: 94  PEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGK-AVHALSVLEGIAGGVFVS 152

Query: 578 ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
             ++ +  R G + +A+ + D    E D   W AL+S
Sbjct: 153 NSLVSMYARCGDMGQARQVFDA-ADERDDVSWNALVS 188


>gi|242055215|ref|XP_002456753.1| hypothetical protein SORBIDRAFT_03g041980 [Sorghum bicolor]
 gi|241928728|gb|EES01873.1| hypothetical protein SORBIDRAFT_03g041980 [Sorghum bicolor]
          Length = 521

 Score =  529 bits (1363), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 264/512 (51%), Positives = 349/512 (68%), Gaps = 4/512 (0%)

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           V++N+ I   AR G +  AL+LF++M  R ++ D++T P +LN  A       A +    
Sbjct: 10  VAYNAAISRCARAGLYARALALFREMRGRGLRADEYTLPPLLNSAALLRGPPGAVAALHA 69

Query: 362 IVKTGFEGYKF-VNNALIDMYAK---QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           ++      +   V NAL+D YA+    G    A  VF+ M  +DV++WTSL+TG A  G+
Sbjct: 70  LLLRAGLAHHLHVANALVDAYARLPCAGGAATARAVFDEMPRRDVVTWTSLLTGLARAGA 129

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
           +  A++ +  M  +G+  D   V+++LS+CA  T L+ G+ VHA  +  G C   SV NS
Sbjct: 130 HAAAVRAYHGMVAAGVQTDEFAVAAVLSSCAGSTALDVGRSVHAAAVHLGLCPFRSVGNS 189

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
           LV +YAK G ++DA  VFD+M  R  ITWTALI+G AQNG+G+ +L+ Y  M+  G +PD
Sbjct: 190 LVSMYAKTGALHDARAVFDAMPARCTITWTALIVGYAQNGRGRRSLEVYTDMVRSGCRPD 249

Query: 538 YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALL 597
           Y+TF+GLLFACSHAGL +  R +F SM   YGI PGPDHYACM+DLLGR+G+L EA  LL
Sbjct: 250 YVTFIGLLFACSHAGLVDAGRDHFRSMAVDYGIAPGPDHYACMVDLLGRAGRLDEAMDLL 309

Query: 598 DQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWE 657
           ++   E DATVWK+LL ACRVH + EL ERAA  ++ L+P +A+PYV LSN+YS A +W 
Sbjct: 310 NRSSTELDATVWKSLLGACRVHRNAELAERAAEMVWRLDPTDAVPYVMLSNLYSRARRWG 369

Query: 658 DAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAG 717
           D AR+R LMK+RGI KEPGCSWV  N   H+F  EDRGHP   +IY K++E+   I+  G
Sbjct: 370 DVARIRALMKARGITKEPGCSWVGVNGVTHLFHVEDRGHPRAAEIYRKVEEMTERIRAEG 429

Query: 718 YVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMK 777
           YVPD ++AL +   EG+E GLAYHSE+LAVAFGLL +P  APIR+FKNLRVCGDCHTA+K
Sbjct: 430 YVPDTDWALQDEAPEGRERGLAYHSERLAVAFGLLAVPAAAPIRVFKNLRVCGDCHTAIK 489

Query: 778 YISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            ++  Y R IILRD+N FHH K G CSCGDYW
Sbjct: 490 MVAKAYGRVIILRDANCFHHMKDGECSCGDYW 521



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 177/357 (49%), Gaps = 7/357 (1%)

Query: 194 FPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDF 253
            P G   VA+   I+  ++ G   +A+  FR+MR  G+ ++++T P +L + A +     
Sbjct: 3   LPAGTGVVAYNAAISRCARAGLYARALALFREMRGRGLRADEYTLPPLLNSAALLRGPPG 62

Query: 254 GAQVHGCILSSGFEAN-VYVQSALIDMYAK---CGDLDSARRLLEYSEIDNEVSWNSMIV 309
                  +L     A+ ++V +AL+D YA+    G   +AR + +     + V+W S++ 
Sbjct: 63  AVAALHALLLRAGLAHHLHVANALVDAYARLPCAGGAATARAVFDEMPRRDVVTWTSLLT 122

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           G AR G H  A+  +  M A  ++ D+F   +VL+  A +  L+  +SVH+  V  G   
Sbjct: 123 GLARAGAHAAAVRAYHGMVAAGVQTDEFAVAAVLSSCAGSTALDVGRSVHAAAVHLGLCP 182

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
           ++ V N+L+ MYAK G L  A  VF+ M  +  I+WT+LI G A +G    +L+ ++DM 
Sbjct: 183 FRSVGNSLVSMYAKTGALHDARAVFDAMPARCTITWTALIVGYAQNGRGRRSLEVYTDMV 242

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQ-QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
            SG  PD+V    +L AC+   +++ G+    ++ +  G          +V +  + G +
Sbjct: 243 RSGCRPDYVTFIGLLFACSHAGLVDAGRDHFRSMAVDYGIAPGPDHYACMVDLLGRAGRL 302

Query: 489 NDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           ++A  + +   T  D   W +L+  C  + +  E  +   +M+ R    D + +V L
Sbjct: 303 DEAMDLLNRSSTELDATVWKSLLGACRVH-RNAELAERAAEMVWRLDPTDAVPYVML 358



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 129/303 (42%), Gaps = 9/303 (2%)

Query: 71  NTMIAAYAN---SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           N ++ AYA    +G    A+ +F+E P ++  TW+SL+ G +  G    A   +  M   
Sbjct: 84  NALVDAYARLPCAGGAATARAVFDEMPRRDVVTWTSLLTGLARAGAHAAAVRAYHGMVAA 143

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G +  ++ +  VL  C+    L  G   H  A+         V   LV MYAK   + +A
Sbjct: 144 GVQTDEFAVAAVLSSCAGSTALDVGRSVHAAAVHLGLCPFRSVGNSLVSMYAKTGALHDA 203

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F   P  +  + WT +I GY+QNG G +++E + DM   G   +  TF  +L AC+ 
Sbjct: 204 RAVFDAMP-ARCTITWTALIVGYAQNGRGRRSLEVYTDMVRSGCRPDYVTFIGLLFACSH 262

Query: 248 VSARDFGA-QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS--EIDNEVSW 304
               D G        +  G        + ++D+  + G LD A  LL  S  E+D  V W
Sbjct: 263 AGLVDAGRDHFRSMAVDYGIAPGPDHYACMVDLLGRAGRLDEAMDLLNRSSTELDATV-W 321

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
            S++ G  R   + E      +M  R    D   Y  + N ++      +   + +L+  
Sbjct: 322 KSLL-GACRVHRNAELAERAAEMVWRLDPTDAVPYVMLSNLYSRARRWGDVARIRALMKA 380

Query: 365 TGF 367
            G 
Sbjct: 381 RGI 383


>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 290/748 (38%), Positives = 431/748 (57%), Gaps = 7/748 (0%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           +D      ++  YA  G L  +   F     KN F+W+S++  Y   G   ++ +   ++
Sbjct: 81  QDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVRRGRYRDSMDCVTEL 140

Query: 125 -QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
             L G RP  YT   VL+ C     L  GE+ H + +K  F+ + +V   L+ +Y++   
Sbjct: 141 LSLSGVRPDFYTFPPVLKACLS---LADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGA 197

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +  A  +F   P  ++  +W  MI+G+ QNG   +A+     M+ E V+ +  T  S+L 
Sbjct: 198 VEVAHKVFVDMP-VRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLP 256

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
            CA  +    G  VH  ++  G E++V+V +ALI+MY+K G L  A+R+ +  E+ + VS
Sbjct: 257 ICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVS 316

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WNS+I  + +      AL  FK+M    ++ D  T  S+ + F    D    ++VH  +V
Sbjct: 317 WNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVV 376

Query: 364 KTGF-EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           +  + E    + NAL++MYAK G++DCA  VF  +  +DVISW +LITG A +G   EA+
Sbjct: 377 RCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAI 436

Query: 423 KYFSDMRIS-GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
             ++ M     I P+     SIL A + +  L+ G ++H   +K+     + V   L+ +
Sbjct: 437 DAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDM 496

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           Y KCG + DA  +F  +     + W A+I     +G G++ALQ +  M A G K D+ITF
Sbjct: 497 YGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITF 556

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
           V LL ACSH+GL + A+W F++M K Y IKP   HY CM+DL GR+G L +A  L+  M 
Sbjct: 557 VSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMP 616

Query: 602 GEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
            + DA++W  LL+ACR+HG+ ELG  A++ L E++  N   YV LSN+Y+  GKWE A +
Sbjct: 617 IQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGAVK 676

Query: 662 VRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPD 721
           VR L + RG+RK PG S V   S V +F + ++ HP   +IY ++  +   +K  GYVPD
Sbjct: 677 VRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQCAEIYEELRVLNAKMKSLGYVPD 736

Query: 722 MNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISA 781
            +F L +VEE+ KE  L  HSE+LA+ FG+++ P  +PIRIFKNLRVCGDCH A KYIS 
Sbjct: 737 YSFVLQDVEEDEKEEILTSHSERLAIVFGIISTPPKSPIRIFKNLRVCGDCHNATKYISK 796

Query: 782 VYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +  R II+RDSNRFHHFK G CSCGDYW
Sbjct: 797 ITEREIIVRDSNRFHHFKDGICSCGDYW 824


>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
 gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
          Length = 736

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 274/740 (37%), Positives = 431/740 (58%), Gaps = 12/740 (1%)

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
           Y   G + +A  +F+     N  +W+ ++  ++  G   EA   + +M LEG RP     
Sbjct: 2   YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61

Query: 137 DNVLRLCSLKGLLQRGEQFHGYAIKT-CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
              + +CS    L++G+  H   ++T   + +  + T L+ MYA+C+ +  A   F    
Sbjct: 62  VVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMG 121

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDM---RVEGVESNQFTFPSILTACAAVSARD 252
             K  V W  +I GYS+NG    A++ ++DM     EG++ +  TF S L AC+ V    
Sbjct: 122 K-KTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G ++    ++SG+ ++  VQ+ALI+MY+KCG L+SAR++ +  +  + ++WN+MI G+A
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
           +QG   +AL LF++M   D K +  T+  +L    +  DL   +++H  + + G+E    
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLV 300

Query: 373 VNNALIDMYAK-QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
           + N L++MY K   +L+ A  VF  ++ +DVI+W  LI     +G  ++AL  F  M++ 
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCIND 490
            + P+ + +S++LSACA L     G+ VHA  + SG C + + ++NSL+ +Y +CG ++D
Sbjct: 361 NVAPNEITLSNVLSACAVLGAKRQGKAVHA-LIASGRCKADVVLENSLMNMYNRCGSLDD 419

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
              VF ++  + +++W+ LI   AQ+G  +  L+ + ++L  G   D +T V  L ACSH
Sbjct: 420 TVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSH 479

Query: 551 AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
            G+ +     F SM   +G+ P   H+ CM+DLL R+G+L  A+ L+  M   PDA  W 
Sbjct: 480 GGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWT 539

Query: 611 ALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ-LSNMYSTAGKWEDAARVRKLMKSR 669
           +LLS C++H D +   R A+ LFELE  +    V  LSN+Y+ AG+W+D   VRK    R
Sbjct: 540 SLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDD---VRKTRNRR 596

Query: 670 GIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNV 729
             RK PGCS++E N  VH F++ D+ HP    I ++I  +   +K+AGYVPDM   LHNV
Sbjct: 597 AARKNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNV 656

Query: 730 EEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIIL 789
           +EE KE  L YHSEKLA+A+GL++ P G P+ I KNLR C DCH A K+IS +  R I++
Sbjct: 657 KEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVV 716

Query: 790 RDSNRFHHFKAGNCSCGDYW 809
           RDS RFHHF+ G+CSC DYW
Sbjct: 717 RDSTRFHHFENGSCSCKDYW 736



 Score =  234 bits (597), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 147/518 (28%), Positives = 263/518 (50%), Gaps = 13/518 (2%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS 109
           G++  A  L  ++ + D      +I  YA    L  A+K F+E   K   TW++LI GYS
Sbjct: 77  GQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYS 136

Query: 110 NYGLDIEAFELFWQM---QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDL 166
             G    A +++  M     EG +P   T  + L  CS+ G + +G +     + + +  
Sbjct: 137 RNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYAS 196

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
           ++ V   L++MY+KC  +  A  +F    + ++ +AW TMI+GY++ G   +A+E F+ M
Sbjct: 197 DSIVQNALINMYSKCGSLESARKVFDRLKN-RDVIAWNTMISGYAKQGAATQALELFQRM 255

Query: 227 RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC-GD 285
                + N  TF  +LTAC  +   + G  +H  +   G+E+++ + + L++MY KC   
Sbjct: 256 GPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSS 315

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           L+ AR++ E     + ++WN +IV + + G  K+AL +FK+M   ++  ++ T  +VL+ 
Sbjct: 316 LEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSA 375

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
            A        K+VH+LI     +    + N+L++MY + G+LD    VF  ++DK ++SW
Sbjct: 376 CAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSW 435

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
           ++LI   A HG     L++F ++   G+  D V + S LSAC+   +L+ G Q    FL 
Sbjct: 436 STLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQ---SFLS 492

Query: 466 SGGCSSLSVDNS----LVLVYAKCGCINDA-NRVFDSMHTRDVITWTALIMGCAQNGKGK 520
             G   L+ D      +V + ++ G +  A N + D     D + WT+L+ GC  +   K
Sbjct: 493 MVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTK 552

Query: 521 EALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENAR 558
            A +  D++    ++ ++ T   L    + AG  ++ R
Sbjct: 553 RAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVR 590



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 196/379 (51%), Gaps = 11/379 (2%)

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
           MY KCG +  A  +    E  N VSW  ++  FAR G ++EAL  +++M    ++ D   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV-NNALIDMYAKQGNLDCAFMVFNLM 397
           +   +   +S+ DL   + +H++I++T    +  +   ALI MYA+  +L+ A   F+ M
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDM---RISGICPDHVVVSSILSACAELTVLE 454
             K +++W +LI G + +G +  ALK + DM      G+ PD +  SS L AC+ +  + 
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180

Query: 455 FGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCA 514
            G+++ A  + SG  S   V N+L+ +Y+KCG +  A +VFD +  RDVI W  +I G A
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 515 QNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
           + G   +AL+ + +M     KP+ +TF+GLL AC++    E  R     + K +G +   
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKV-KEHGYESDL 299

Query: 575 DHYACMIDLLGR-SGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLF 633
                ++++  + S  L EA+ + +++    D   W  L+ A   +G     + A +   
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERLRTR-DVITWNILIVAYVQYGQ---AKDALDIFK 355

Query: 634 ELEPMNAMP-YVQLSNMYS 651
           +++  N  P  + LSN+ S
Sbjct: 356 QMQLENVAPNEITLSNVLS 374



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 144/299 (48%), Gaps = 13/299 (4%)

Query: 380 MYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVV 439
           MY K G++  A  VF+ ++  + +SWT ++   A +G Y EAL Y+  M + G+ PD  +
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 440 VSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAKCGCINDANRVFDSM 498
               +  C+    L+ GQ +HA+ L++      + +  +L+ +YA+C  +  A + FD M
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR---GTKPDYITFVGLLFACSHAGLAE 555
             + ++TW ALI G ++NG  + AL+ Y  M+++   G KPD ITF   L+ACS  G   
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180

Query: 556 NARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
             R   E+     G          +I++  + G L  A+ + D++    D   W  ++S 
Sbjct: 181 QGR-EIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNR-DVIAWNTMISG 238

Query: 616 CRVHG----DLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRG 670
               G     LEL +R   N  + +P N + ++ L    +     E    + + +K  G
Sbjct: 239 YAKQGAATQALELFQRMGPN--DPKP-NVVTFIGLLTACTNLEDLEQGRAIHRKVKEHG 294



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 74/312 (23%), Positives = 141/312 (45%), Gaps = 56/312 (17%)

Query: 49  SGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY 108
           S  ++EA Q+FE++  RD  TWN +I AY   G+ +                        
Sbjct: 313 SSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAK------------------------ 348

Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA 168
                  +A ++F QMQLE   P++ TL NVL  C++ G  ++G+  H          + 
Sbjct: 349 -------DALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADV 401

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
            +   L++MY +C  + +   +F    D K+ V+W+T+I  Y+Q+G+    +E F ++  
Sbjct: 402 VLENSLMNMYNRCGSLDDTVGVFAAIRD-KSLVSWSTLIAAYAQHGHSRTGLEHFWELLQ 460

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQS------------AL 276
           EG+ ++  T  S L+AC+           HG +L  G ++ + +               +
Sbjct: 461 EGLAADDVTMVSTLSACS-----------HGGMLKEGVQSFLSMVGDHGLAPDYRHFLCM 509

Query: 277 IDMYAKCGDLDSARRLL-EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           +D+ ++ G L++A  L+ +   + + V+W S++ G       K A  +  K+   + + +
Sbjct: 510 VDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDE 569

Query: 336 DFTYPSVLNCFA 347
             T   + N +A
Sbjct: 570 HSTVTLLSNVYA 581


>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 701

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 265/699 (37%), Positives = 413/699 (59%), Gaps = 23/699 (3%)

Query: 132 SQYTLDNVLRLCSLKGL---LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
           +Q+T+  +LR    K L    ++ +Q H + +KT   L++  +  LV        + +  
Sbjct: 5   TQHTISKILRKTPNKTLSVSTRQAKQLHAHIVKTKGTLHSDNI--LVLSLYSNLNLLQHS 62

Query: 189 -YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
            +LF   P     +AW+++I  Y+ +     +   F  MR   V  N+  FPS+L A   
Sbjct: 63  LHLFNSLPSPPPPLAWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTL 122

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD---------------LDSARRL 292
           +        +H C +  G ++++Y+ +ALI+ YAK  +               +D  +++
Sbjct: 123 LKHHKLAHSLHACTVRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKV 182

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR-DIKIDDFTYPSVLNCFASNID 351
            +   + + VSWN++I GFA+ G + EAL + ++M     +K D FT  S+L  FA ++D
Sbjct: 183 FDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVD 242

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
           +N  K +H   V+ GF+G  F+ ++LIDMYAK   L+C+   F ++  KD ISW S+I G
Sbjct: 243 VNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAG 302

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
           C  +G ++  L +F  M    + P  V  SS++ ACA LT L  G+Q+H   ++ G   +
Sbjct: 303 CVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDN 362

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
             + +SLV +YAKCG I  A  VFD +  RD++ WTA+IMGCA +G   +A+  ++ ML 
Sbjct: 363 EFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLE 422

Query: 532 RGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLI 591
            G +P Y+ F+ +L ACSHAGL +    YF SM++ +GI PG +HYA + DLLGR+G+L 
Sbjct: 423 DGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLE 482

Query: 592 EAKALLDQMVG-EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMY 650
           EA   +  M G +P  +VW  LL+ACR H  +EL E+  + L  ++  N   YV +SN+Y
Sbjct: 483 EAYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIY 542

Query: 651 STAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIM 710
           S A +W+DAAR+R  M+ +G++K P CSW+E  +QVH F++ D+ HP    I   +D ++
Sbjct: 543 SAAQRWKDAARLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLL 602

Query: 711 LLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCG 770
             +++ GYV D N  LH+V+EE K   L  HSE+LA+A+G+++   G  IR+ KN+RVC 
Sbjct: 603 EQMEKEGYVIDTNQVLHDVDEELKRELLHNHSERLAIAYGIISTTAGTTIRVIKNIRVCA 662

Query: 771 DCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           DCHTA+K+I+ +  R I +RD++RFHHFK G+CSCGDYW
Sbjct: 663 DCHTAIKFITKIVGREITVRDNSRFHHFKNGSCSCGDYW 701



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 217/412 (52%), Gaps = 49/412 (11%)

Query: 64  DRDGFTWNTMIAAYA---NSGRLREA------------KKLFNETPFKNFFTWSSLIYGY 108
           D D +  N +I  YA   N+G++ +             KK+F+  P ++  +W+++I G+
Sbjct: 142 DSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTVIAGF 201

Query: 109 SNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLN 167
           +  G+ +EA ++  +M   G  +P  +TL ++L + +    + +G++ HGYA++  FD +
Sbjct: 202 AQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGD 261

Query: 168 AFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR 227
            F+ + L+DMYAKC  +  +   F + P  K+ ++W ++I G  QNG   + +  FR M 
Sbjct: 262 VFIGSSLIDMYAKCNRLECSLRAFYILPR-KDAISWNSIIAGCVQNGEFDRGLGFFRRML 320

Query: 228 VEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLD 287
            E V+    +F S++ ACA ++A   G Q+HGCI+  GF+ N ++ S+L+DMYAKCG++ 
Sbjct: 321 KENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIK 380

Query: 288 SARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFA 347
            AR + +  +  + V+W ++I+G A  G   +A+SLF+ M      ++D   P    C+ 
Sbjct: 381 MARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENM------LEDGVRP----CYV 430

Query: 348 SNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTS 407
           + + +  A S H+ +V    EG+++ N+   D     G L+    V +L+          
Sbjct: 431 AFMAVLTACS-HAGLVD---EGWRYFNSMERDFGIAPG-LEHYAAVADLL---------- 475

Query: 408 LITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
                   G  EEA  + S+MR  G+ P   V S +L+AC     +E  ++V
Sbjct: 476 -----GRAGRLEEAYDFISNMR--GVQPTGSVWSILLAACRAHKSVELAEKV 520



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 115/247 (46%), Gaps = 4/247 (1%)

Query: 44  VDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSS 103
           VD +   EI   G       D D F  +++I  YA   RL  + + F   P K+  +W+S
Sbjct: 241 VDVNKGKEIH--GYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNS 298

Query: 104 LIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC 163
           +I G    G        F +M  E  +P   +  +V+  C+    L  G Q HG  ++  
Sbjct: 299 IIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLG 358

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
           FD N F+ + LVDMYAKC  I  A Y+F    D ++ VAWT +I G + +G+   A+  F
Sbjct: 359 FDDNEFIASSLVDMYAKCGNIKMARYVFDRI-DKRDMVAWTAIIMGCAMHGHALDAVSLF 417

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAK 282
            +M  +GV      F ++LTAC+     D G +    +    G    +   +A+ D+  +
Sbjct: 418 ENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGR 477

Query: 283 CGDLDSA 289
            G L+ A
Sbjct: 478 AGRLEEA 484


>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
          Length = 897

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 296/796 (37%), Positives = 434/796 (54%), Gaps = 59/796 (7%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           ++A+Y   G    A  +           W+ LI  +   G    A  +  +M   G RP 
Sbjct: 102 VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPD 161

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
            +TL +VL+ C      + G  FHG      F+ N F+   LV MY++C  + EA  +F 
Sbjct: 162 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 221

Query: 193 MFPDG--KNHVAWTTMITGYSQNGYGFKAIECFRDM------RVEGVESNQFTFPSILTA 244
                   + ++W ++++ + ++   + A++ F  M      +     S+  +  +IL A
Sbjct: 222 EITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPA 281

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C ++ A     +VHG  + +G   +V+V +ALID YAKCG +++A ++    E  + VSW
Sbjct: 282 CGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSW 341

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV-------------LNCFASNI- 350
           N+M+ G+++ G  + A  LFK M   +I +D  T+ +V             LN F   I 
Sbjct: 342 NAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIF 401

Query: 351 --DLNNAKSVHSLIVK----------TGFEGYKFVN-------------------NALID 379
              L N  ++ S++            T    Y   N                   NALID
Sbjct: 402 SGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALID 461

Query: 380 MYAKQGNLDCAFMVFN--LMQDKDVISWTSLITGCAYHGSYEEALKYFSDM--RISGICP 435
           MY+K  +   A  +F+   +++++V++WT +I G A +G   +ALK F +M     G+ P
Sbjct: 462 MYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAP 521

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSG--GCSSLSVDNSLVLVYAKCGCINDANR 493
           +   +S IL ACA L  +  G+Q+HA  L+      S+  V N L+ +Y+KCG ++ A  
Sbjct: 522 NAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARH 581

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGL 553
           VFDSM  +  I+WT+++ G   +G+G EAL  +D+M   G  PD ITF+ +L+ACSH G+
Sbjct: 582 VFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGM 641

Query: 554 AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
            +    YF+SM   YG+ P  +HYAC IDLL RSG+L +A   +  M  EP A VW ALL
Sbjct: 642 VDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALL 701

Query: 614 SACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRK 673
           SACRVH ++EL E A N L E+   N   Y  +SN+Y+TAG+W+D AR+R LMK  GI+K
Sbjct: 702 SACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKK 761

Query: 674 EPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEG 733
            PGCSWV+       F   DR HPL   IY+ ++ ++  IK  GYVP+ NFALH+V+EE 
Sbjct: 762 RPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEE 821

Query: 734 KEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSN 793
           K   L  HSEKLA+A+GLLT   G PIRI KNLRVCGDCH+A  YIS +    I++RD +
Sbjct: 822 KNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPS 881

Query: 794 RFHHFKAGNCSCGDYW 809
           RFHHFK G+CSCG YW
Sbjct: 882 RFHHFKNGSCSCGGYW 897



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 140/443 (31%), Positives = 216/443 (48%), Gaps = 29/443 (6%)

Query: 6   FKILNFSLRCRS-KIIGPARYTHNVGNSVK----PASDLNRALVD-FSNSGEIDEAGQLF 59
             I+N    C S K +   +  H  GN+++    P   +  AL+D ++  G ++ A ++F
Sbjct: 273 ISIVNILPACGSLKAVPQTKEVH--GNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVF 330

Query: 60  EKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF----FTWSSLIYGYSNYGLDI 115
             M  +D  +WN M+A Y+ SG    A +LF     +N      TW+++I GYS  G   
Sbjct: 331 NMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSH 390

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCF----------D 165
           EA  LF QM   G  P+  T+ +VL  C+  G   +G + H Y++K C           D
Sbjct: 391 EALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGED 450

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFP-DGKNHVAWTTMITGYSQNGYGFKAIECFR 224
            +  V   L+DMY+KC+    A  +F   P + +N V WT MI G++Q G    A++ F 
Sbjct: 451 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFV 510

Query: 225 DMRVE--GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG-FEANVY-VQSALIDMY 280
           +M  E  GV  N +T   IL ACA ++A   G Q+H  +L    +E++ Y V + LIDMY
Sbjct: 511 EMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMY 570

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
           +KCGD+D+AR + +     + +SW SM+ G+   G   EAL +F KM       DD T+ 
Sbjct: 571 SKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFL 630

Query: 341 SVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQ 398
            VL  C    +         S+    G           ID+ A+ G LD A+  V ++  
Sbjct: 631 VVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPM 690

Query: 399 DKDVISWTSLITGCAYHGSYEEA 421
           +   + W +L++ C  H + E A
Sbjct: 691 EPTAVVWVALLSACRVHSNVELA 713



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 125/502 (24%), Positives = 213/502 (42%), Gaps = 91/502 (18%)

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG--------------------FEAN 269
           GV+     F S+L  C + +      Q+H  I++SG                    F + 
Sbjct: 39  GVDVYPSHFASLLKECKSANTVH---QIHQQIIASGLLSLPTPLLSVSLPALPSEPFISP 95

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA 329
             + + ++  Y  CG  D A  +LE       V WN +I    +QG    A+++  +M  
Sbjct: 96  RSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLR 155

Query: 330 RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDC 389
              + D FT P VL             + H LI   GFE   F+ NAL+ MY++ G+L+ 
Sbjct: 156 AGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEE 215

Query: 390 AFMVFNLMQDK---DVISWTSLITGCAYHGSYEEALKYFSDMRI------SGICPDHVVV 440
           A M+F+ +  +   DVISW S+++      +   AL  FS M +      +    D + +
Sbjct: 216 ASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISI 275

Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT 500
            +IL AC  L  +   ++VH   +++G    + V N+L+  YAKCG + +A +VF+ M  
Sbjct: 276 VNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEF 335

Query: 501 R-----------------------------------DVITWTALIMGCAQNGKGKEALQF 525
           +                                   DV+TWTA+I G +Q G   EAL  
Sbjct: 336 KDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNL 395

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGL--------AENARWYFESMDKVYGIKPGPDH- 576
           + QM+  G+ P+ +T + +L AC+  G         A + +    ++D  +G   G D  
Sbjct: 396 FRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFG---GEDED 452

Query: 577 ---YACMIDLLGRSGKLIEAKALLDQM-VGEPDATVWKALLSACRVHGDLELGERAANNL 632
              Y  +ID+  +      A+++ D + + E +   W  ++     +GD       +N+ 
Sbjct: 453 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGD-------SNDA 505

Query: 633 FEL-EPMNAMPYVQLSNMYSTA 653
            +L   M + PY    N Y+ +
Sbjct: 506 LKLFVEMISEPYGVAPNAYTIS 527



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/327 (24%), Positives = 138/327 (42%), Gaps = 26/327 (7%)

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
           F   + +   ++  Y   G  D A +V   +     + W  LI      G  + A+    
Sbjct: 92  FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 151

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
            M  +G  PDH  +  +L AC EL     G   H +   +G  S++ + N+LV +Y++CG
Sbjct: 152 RMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 211

Query: 487 CINDANRVFDSMHTR---DVITWTALIMGCAQNGKGKEALQFYDQM-LARGTKP-----D 537
            + +A+ +FD +  R   DVI+W +++    ++     AL  + +M L    KP     D
Sbjct: 212 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 271

Query: 538 YITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPG--PDHYA--CMIDLLGRSGKLI 591
            I+ V +L AC         +       +V+G  I+ G  PD +    +ID   + G L+
Sbjct: 272 IISIVNILPACGSLKAVPQTK-------EVHGNAIRNGTFPDVFVGNALIDAYAKCG-LM 323

Query: 592 EAKALLDQMVGEPDATVWKALLSACRVHGDLELG-ERAANNLFELEPMNAMPYVQLSNMY 650
           E    +  M+   D   W A+++     G+ E   E   N   E  P++ + +  +   Y
Sbjct: 324 ENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGY 383

Query: 651 STAGKWEDAARVRKLMKSRGIRKEPGC 677
           S  G   +A  + + M   G    P C
Sbjct: 384 SQRGCSHEALNLFRQMIFSG--SLPNC 408


>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 679

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 254/659 (38%), Positives = 404/659 (61%), Gaps = 2/659 (0%)

Query: 151 RGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
           + +Q H   I+T   L+    + ++ +Y   K + EA  +FK   +    +AW ++I  +
Sbjct: 23  QAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLVFKTL-ESPPVLAWKSVIRCF 80

Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV 270
           +      +A+  F +MR  G   +   FPS+L +C  +    FG  VHG I+  G + ++
Sbjct: 81  TDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDL 140

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
           Y  +AL++MY+K   +DS R++ E     + VS+N++I G+A+ G +++AL + ++M   
Sbjct: 141 YTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTS 200

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
           D+K D FT  SVL  F+  +D+   K +H  +++ G +   ++ ++L+DMYAK   ++ +
Sbjct: 201 DLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDS 260

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
             VF+ +  +D ISW SL+ G   +G Y EAL+ F  M  + + P  V  SS++ ACA L
Sbjct: 261 ERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHL 320

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
             L  G+Q+H   L+ G   ++ + ++LV +Y+KCG I  A ++FD M+  D ++WTA+I
Sbjct: 321 ATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAII 380

Query: 511 MGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGI 570
           MG A +G G EA+  +++M  +G KP+ + FV +L ACSH GL + A  YF SM KVYG+
Sbjct: 381 MGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGL 440

Query: 571 KPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAAN 630
               +HYA + DLLGR+GKL EA   + +M  EP  +VW  LLS+C VH +LEL E+ A 
Sbjct: 441 NQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAE 500

Query: 631 NLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFI 690
            +F ++  N   YV + NMY++ G+W++ A++R  ++ +G+RK+P CSW+E  ++ H F+
Sbjct: 501 KIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWIEMKNKTHGFV 560

Query: 691 SEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFG 750
           S DR HP    I   +  +M  +++ GYV D +  LH+V+EE K   L  HSE+LAVAFG
Sbjct: 561 SGDRSHPSMDRINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFG 620

Query: 751 LLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           ++    G  IR+ KN+R+C DCH A+K+IS +  R II+RD++RFHHF  G+CSCGDYW
Sbjct: 621 IINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGSCSCGDYW 679



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 208/384 (54%), Gaps = 1/384 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           + +I+ Y N   L EA  +F          W S+I  +++  L   A   F +M+  G  
Sbjct: 43  SIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRC 102

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P      +VL+ C++   L+ GE  HG+ ++   D + +    L++MY+K   I     +
Sbjct: 103 PDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKV 162

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F++ P  K+ V++ T+I GY+Q+G    A+   R+M    ++ + FT  S+L   +    
Sbjct: 163 FELMPR-KDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVD 221

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              G ++HG ++  G +++VY+ S+L+DMYAK   ++ + R+  +    + +SWNS++ G
Sbjct: 222 VLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAG 281

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           + + G + EAL LF++M +  ++     + SV+   A    L+  K +H  +++ GF   
Sbjct: 282 YVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRN 341

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
            F+ +AL+DMY+K GN+  A  +F+ M   D +SWT++I G A HG   EA+  F +M+ 
Sbjct: 342 IFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKR 401

Query: 431 SGICPDHVVVSSILSACAELTVLE 454
            G+ P+ V   ++L+AC+ + +++
Sbjct: 402 QGVKPNQVAFVAVLTACSHVGLVD 425



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 201/369 (54%), Gaps = 17/369 (4%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D +T N ++  Y+    +   +K+F   P K+  +++++I GY+  G+  +A  +  +
Sbjct: 137 DCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVRE 196

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M     +P  +TL +VL + S    + +G++ HGY I+   D + ++ + LVDMYAK   
Sbjct: 197 MGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSAR 256

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I ++E +F      ++ ++W +++ GY QNG   +A+  FR M    V      F S++ 
Sbjct: 257 IEDSERVFSHLYR-RDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIP 315

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           ACA ++    G Q+HG +L  GF  N+++ SAL+DMY+KCG++ +AR++ +   + +EVS
Sbjct: 316 ACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVS 375

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL--------NNA 355
           W ++I+G A  G   EA+SLF++M  + +K +   + +VL    S++ L        N+ 
Sbjct: 376 WTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTA-CSHVGLVDEAWGYFNSM 434

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAY 414
             V+ L      E Y     A+ D+  + G L+ A+   + M+ +   S W++L++ C+ 
Sbjct: 435 TKVYGL--NQELEHYA----AVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSV 488

Query: 415 HGSYEEALK 423
           H + E A K
Sbjct: 489 HKNLELAEK 497



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 154/311 (49%), Gaps = 12/311 (3%)

Query: 44  VDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSS 103
           VD     EI   G +  K  D D +  ++++  YA S R+ +++++F+    ++  +W+S
Sbjct: 220 VDVLKGKEIH--GYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNS 277

Query: 104 LIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC 163
           L+ GY   G   EA  LF QM     RP      +V+  C+    L  G+Q HGY ++  
Sbjct: 278 LVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGG 337

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
           F  N F+ + LVDMY+KC  I  A  +F    +  + V+WT +I G++ +G+G +A+  F
Sbjct: 338 FGRNIFIASALVDMYSKCGNIQAARKIFDRM-NLHDEVSWTAIIMGHALHGHGHEAVSLF 396

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFG-AQVHGCILSSGFEANVYVQSALIDMYAK 282
            +M+ +GV+ NQ  F ++LTAC+ V   D      +      G    +   +A+ D+  +
Sbjct: 397 EEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGR 456

Query: 283 CGDLDSARRLLEYSEIDNEVS-WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF---T 338
            G L+ A   +    ++   S W++++   +    HK  L L +K+  +   ID      
Sbjct: 457 AGKLEEAYDFISKMRVEPTGSVWSTLLSSCS---VHKN-LELAEKVAEKIFTIDSENMGA 512

Query: 339 YPSVLNCFASN 349
           Y  + N +ASN
Sbjct: 513 YVLMCNMYASN 523



 Score = 41.6 bits (96), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 9/180 (5%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK---- 96
           ALVD +S  G I  A ++F++M+  D  +W  +I  +A  G   EA  LF E   +    
Sbjct: 347 ALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKP 406

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
           N   + +++   S+ GL  EA+  F  M  + Y  +Q  L++   +  L G   + E+ +
Sbjct: 407 NQVAFVAVLTACSHVGLVDEAWGYFNSMT-KVYGLNQ-ELEHYAAVADLLGRAGKLEEAY 464

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF-KMFP-DGKNHVAWTTMITGYSQNG 214
            +  K   +    V + L+   +  K +  AE +  K+F  D +N  A+  M   Y+ NG
Sbjct: 465 DFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNG 524


>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
 gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
          Length = 890

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 293/796 (36%), Positives = 431/796 (54%), Gaps = 59/796 (7%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           ++A+Y   G    A  +           W+ LI  +   G    A  +  +M   G RP 
Sbjct: 95  VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPD 154

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
            +TL +VL+ C      + G  FHG      F+ N F+   LV MY++C  + EA  +F 
Sbjct: 155 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 214

Query: 193 MFPDG--KNHVAWTTMITGYSQNGYGFKAIECFRDM------RVEGVESNQFTFPSILTA 244
                   + ++W ++++ + ++   + A++ F  M      +     S+  +  +IL A
Sbjct: 215 EITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPA 274

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C ++ A     +VHG  + +G   +V+V +ALID YAKCG +++A ++    E  + VSW
Sbjct: 275 CGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSW 334

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL--------------------- 343
           N+M+ G+++ G  + A  LFK M   +I +D  T+ +V+                     
Sbjct: 335 NAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIF 394

Query: 344 -----NCFASNIDLNNAKSVHSLIVKTGFEGYKFVN-------------------NALID 379
                NC      L+   S+ +    T    Y   N                   NALID
Sbjct: 395 SGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALID 454

Query: 380 MYAKQGNLDCAFMVFN--LMQDKDVISWTSLITGCAYHGSYEEALKYFSDM--RISGICP 435
           MY+K  +   A  +F+   +++++V++WT +I G A +G   +ALK F +M     G+ P
Sbjct: 455 MYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAP 514

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSG--GCSSLSVDNSLVLVYAKCGCINDANR 493
           +   +S IL ACA L  +  G+Q+HA  L+      S+  V N L+ +Y+KCG ++ A  
Sbjct: 515 NAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARH 574

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGL 553
           VFDSM  +  I+WT+++ G   +G+G EAL  +D+M   G  PD ITF+ +L+ACSH G+
Sbjct: 575 VFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGM 634

Query: 554 AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
            +    YF+SM   YG+ P  +HYAC IDLL RSG+L +A   +  M  EP A VW ALL
Sbjct: 635 VDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALL 694

Query: 614 SACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRK 673
           SACRVH ++EL E A N L E+   N   Y  +SN+Y+TAG+W+D AR+R LMK  GI+K
Sbjct: 695 SACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKK 754

Query: 674 EPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEG 733
            PGCSWV+       F   DR HPL   IY+ ++ ++  IK  GYVP+ NFALH+V+EE 
Sbjct: 755 RPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEE 814

Query: 734 KEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSN 793
           K   L  HSEKLA+A+GLLT   G PIRI KNLRVCGDCH+A  YIS +    I++RD +
Sbjct: 815 KNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPS 874

Query: 794 RFHHFKAGNCSCGDYW 809
           RFHHFK G+CSCG YW
Sbjct: 875 RFHHFKNGSCSCGGYW 890



 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 140/443 (31%), Positives = 216/443 (48%), Gaps = 29/443 (6%)

Query: 6   FKILNFSLRCRS-KIIGPARYTHNVGNSVK----PASDLNRALVD-FSNSGEIDEAGQLF 59
             I+N    C S K +   +  H  GN+++    P   +  AL+D ++  G ++ A ++F
Sbjct: 266 ISIVNILPACGSLKAVPQTKEVH--GNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVF 323

Query: 60  EKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF----FTWSSLIYGYSNYGLDI 115
             M  +D  +WN M+A Y+ SG    A +LF     +N      TW+++I GYS  G   
Sbjct: 324 NMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSH 383

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCF----------D 165
           EA  LF QM   G  P+  T+ +VL  C+  G   +G + H Y++K C           D
Sbjct: 384 EALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGED 443

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFP-DGKNHVAWTTMITGYSQNGYGFKAIECFR 224
            +  V   L+DMY+KC+    A  +F   P + +N V WT MI G++Q G    A++ F 
Sbjct: 444 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFV 503

Query: 225 DMRVE--GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG-FEANVY-VQSALIDMY 280
           +M  E  GV  N +T   IL ACA ++A   G Q+H  +L    +E++ Y V + LIDMY
Sbjct: 504 EMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMY 563

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
           +KCGD+D+AR + +     + +SW SM+ G+   G   EAL +F KM       DD T+ 
Sbjct: 564 SKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFL 623

Query: 341 SVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQ 398
            VL  C    +         S+    G           ID+ A+ G LD A+  V ++  
Sbjct: 624 VVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPM 683

Query: 399 DKDVISWTSLITGCAYHGSYEEA 421
           +   + W +L++ C  H + E A
Sbjct: 684 EPTAVVWVALLSACRVHSNVELA 706



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 125/502 (24%), Positives = 213/502 (42%), Gaps = 91/502 (18%)

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG--------------------FEAN 269
           GV+     F S+L  C + +      Q+H  I++SG                    F + 
Sbjct: 32  GVDVYPSHFASLLKECKSANTVH---QIHQQIIASGLLSLPTPLLSVSLPALPSEPFISP 88

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA 329
             + + ++  Y  CG  D A  +LE       V WN +I    +QG    A+++  +M  
Sbjct: 89  RSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLR 148

Query: 330 RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDC 389
              + D FT P VL             + H LI   GFE   F+ NAL+ MY++ G+L+ 
Sbjct: 149 AGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEE 208

Query: 390 AFMVFNLMQDK---DVISWTSLITGCAYHGSYEEALKYFSDMRI------SGICPDHVVV 440
           A M+F+ +  +   DVISW S+++      +   AL  FS M +      +    D + +
Sbjct: 209 ASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISI 268

Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT 500
            +IL AC  L  +   ++VH   +++G    + V N+L+  YAKCG + +A +VF+ M  
Sbjct: 269 VNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEF 328

Query: 501 R-----------------------------------DVITWTALIMGCAQNGKGKEALQF 525
           +                                   DV+TWTA+I G +Q G   EAL  
Sbjct: 329 KDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNL 388

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGL--------AENARWYFESMDKVYGIKPGPDH- 576
           + QM+  G+ P+ +T + +L AC+  G         A + +    ++D  +G   G D  
Sbjct: 389 FRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFG---GEDED 445

Query: 577 ---YACMIDLLGRSGKLIEAKALLDQM-VGEPDATVWKALLSACRVHGDLELGERAANNL 632
              Y  +ID+  +      A+++ D + + E +   W  ++     +GD       +N+ 
Sbjct: 446 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGD-------SNDA 498

Query: 633 FEL-EPMNAMPYVQLSNMYSTA 653
            +L   M + PY    N Y+ +
Sbjct: 499 LKLFVEMISEPYGVAPNAYTIS 520



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/327 (24%), Positives = 138/327 (42%), Gaps = 26/327 (7%)

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
           F   + +   ++  Y   G  D A +V   +     + W  LI      G  + A+    
Sbjct: 85  FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 144

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
            M  +G  PDH  +  +L AC EL     G   H +   +G  S++ + N+LV +Y++CG
Sbjct: 145 RMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 204

Query: 487 CINDANRVFDSMHTR---DVITWTALIMGCAQNGKGKEALQFYDQM-LARGTKP-----D 537
            + +A+ +FD +  R   DVI+W +++    ++     AL  + +M L    KP     D
Sbjct: 205 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 264

Query: 538 YITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPG--PDHYA--CMIDLLGRSGKLI 591
            I+ V +L AC         +       +V+G  I+ G  PD +    +ID   + G L+
Sbjct: 265 IISIVNILPACGSLKAVPQTK-------EVHGNAIRNGTFPDVFVGNALIDAYAKCG-LM 316

Query: 592 EAKALLDQMVGEPDATVWKALLSACRVHGDLELG-ERAANNLFELEPMNAMPYVQLSNMY 650
           E    +  M+   D   W A+++     G+ E   E   N   E  P++ + +  +   Y
Sbjct: 317 ENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGY 376

Query: 651 STAGKWEDAARVRKLMKSRGIRKEPGC 677
           S  G   +A  + + M   G    P C
Sbjct: 377 SQRGCSHEALNLFRQMIFSG--SLPNC 401


>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330-like [Cucumis
           sativus]
          Length = 712

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 256/667 (38%), Positives = 403/667 (60%), Gaps = 37/667 (5%)

Query: 177 MYAKCKCIFEAEYLFKM--FPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           +Y+    + ++  LF    FP     +AW ++I  Y+ +G   +++  F  M   G+  +
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPA---LAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPD 105

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK------------ 282
              FPS+L +CA +   + G  +HG I+  G + ++Y  +AL++MY+K            
Sbjct: 106 HNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRL 165

Query: 283 -CGDL-------------------DSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
             G++                   DS R++ E     + VSWN++I G AR G ++E L 
Sbjct: 166 GAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLR 225

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYA 382
           + ++M   ++K D FT  SVL   A N+D++  K +H   ++ G +   +V ++LIDMYA
Sbjct: 226 MIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYA 285

Query: 383 KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
           K   +  +  VF L+ ++D ISW S+I GC  +G ++E L++F  M ++ I P     SS
Sbjct: 286 KCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSS 345

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
           I+ ACA LT L  G+Q+H    ++G   ++ + +SLV +YAKCG I  A ++FD M  RD
Sbjct: 346 IMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRD 405

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
           +++WTA+IMGCA +G+  +A++ ++QM   G KP+++ F+ +L ACSH GL + A  YF 
Sbjct: 406 MVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFN 465

Query: 563 SMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDL 622
           SM + +GI PG +HYA + DLLGR+G+L EA   +  M   P  ++W  LLSACRVH ++
Sbjct: 466 SMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNI 525

Query: 623 ELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVET 682
           ++ E+ AN + E++P N   Y+ L+N+YS A +W++AA+ R  M+  GIRK P CSW+E 
Sbjct: 526 DMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEV 585

Query: 683 NSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHS 742
            ++V+ F++ D  HP    I   ++ ++ L+++ GYVPD +   H+VEEE K+  +  HS
Sbjct: 586 KNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHS 645

Query: 743 EKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGN 802
           E+LA+ FG++  P G  IR+ KNLRVC DCHTA K+IS +  R I++RD++RFHHFK G 
Sbjct: 646 ERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGT 705

Query: 803 CSCGDYW 809
           CSCGDYW
Sbjct: 706 CSCGDYW 712



 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 209/405 (51%), Gaps = 35/405 (8%)

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
           Y++   L ++ +LFN   F     W S+I  Y+++GL  ++   F  M   G  P     
Sbjct: 50  YSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVF 109

Query: 137 DNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA--------- 187
            +VL+ C+L   L  GE  HGY I+   D + +    L++MY+K + + E+         
Sbjct: 110 PSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGE 169

Query: 188 -----------------------EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
                                    +F+M P+ K+ V+W T+I G ++NG   + +   R
Sbjct: 170 VFDEMTERTRSVRTVSVLSEDSVRKIFEMMPE-KDLVSWNTIIAGNARNGLYEETLRMIR 228

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
           +M    ++ + FT  S+L   A       G ++HGC +  G +A++YV S+LIDMYAKC 
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288

Query: 285 DL-DSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
            + DS R     +E D  +SWNS+I G  + G   E L  F++M    IK   +++ S++
Sbjct: 289 RVADSCRVFTLLTERDG-ISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIM 347

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVI 403
              A    L+  K +H  I + GF+   F+ ++L+DMYAK GN+  A  +F+ M+ +D++
Sbjct: 348 PACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMV 407

Query: 404 SWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
           SWT++I GCA HG   +A++ F  M   GI P+HV   ++L+AC+
Sbjct: 408 SWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACS 452



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 218/402 (54%), Gaps = 23/402 (5%)

Query: 55  AGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLD 114
           AG++F++M++R   T +    +  +   +R   K+F   P K+  +W+++I G +  GL 
Sbjct: 167 AGEVFDEMTER---TRSVRTVSVLSEDSVR---KIFEMMPEKDLVSWNTIIAGNARNGLY 220

Query: 115 IEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
            E   +  +M     +P  +TL +VL L +    + RG++ HG +I+   D + +V + L
Sbjct: 221 EETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSL 280

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           +DMYAKC  + ++  +F +  + ++ ++W ++I G  QNG   + +  FR M +  ++  
Sbjct: 281 IDMYAKCTRVADSCRVFTLLTE-RDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPK 339

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
            ++F SI+ ACA ++    G Q+HG I  +GF+ N+++ S+L+DMYAKCG++ +A+++ +
Sbjct: 340 SYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFD 399

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
              + + VSW +MI+G A  G   +A+ LF++M    IK +   + +VL   +    ++ 
Sbjct: 400 RMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDE 459

Query: 355 A-KSVHSLI----VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSL 408
           A K  +S+     +  G E Y  V+    D+  + G L+ A+     M      S W +L
Sbjct: 460 AWKYFNSMTRDFGIAPGVEHYAAVS----DLLGRAGRLEEAYDFICGMHIGPTGSIWATL 515

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPD----HVVVSSILSA 446
           ++ C  H + + A K  +  RI  + P+    ++++++I SA
Sbjct: 516 LSACRVHXNIDMAEKVAN--RILEVDPNNTGAYILLANIYSA 555



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 198/425 (46%), Gaps = 45/425 (10%)

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID-MYAKCGDLDSARR 291
           S +    ++L    ++ +R    Q+H  +L   F+A+     +L+  +Y+    L  + R
Sbjct: 4   STEALVKALLRNPLSIKSRSQAQQLHAQVLK--FQASSLCNLSLLLSIYSHINLLHDSLR 61

Query: 292 LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID 351
           L         ++W S+I  +   G   ++L  F  M A  +  D   +PSVL   A  +D
Sbjct: 62  LFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMD 121

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL------------------------ 387
           LN  +S+H  I++ G +   +  NAL++MY+K   L                        
Sbjct: 122 LNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSV 181

Query: 388 --------DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVV 439
                   D    +F +M +KD++SW ++I G A +G YEE L+   +M  + + PD   
Sbjct: 182 RTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFT 241

Query: 440 VSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH 499
           +SS+L   AE   +  G+++H   ++ G  + + V +SL+ +YAKC  + D+ RVF  + 
Sbjct: 242 LSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLT 301

Query: 500 TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW 559
            RD I+W ++I GC QNG   E L+F+ QML    KP   +F  ++ AC+H         
Sbjct: 302 ERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHL-----TTL 356

Query: 560 YFESMDKVYGIKPGPDH----YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
           +       Y  + G D      + ++D+  + G +  AK + D+M    D   W A++  
Sbjct: 357 HLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLR-DMVSWTAMIMG 415

Query: 616 CRVHG 620
           C +HG
Sbjct: 416 CALHG 420



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 120/247 (48%), Gaps = 4/247 (1%)

Query: 44  VDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSS 103
           VD S   EI   G    +  D D +  +++I  YA   R+ ++ ++F     ++  +W+S
Sbjct: 253 VDISRGKEIH--GCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNS 310

Query: 104 LIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC 163
           +I G    GL  E    F QM +   +P  Y+  +++  C+    L  G+Q HGY  +  
Sbjct: 311 IIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNG 370

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
           FD N F+ + LVDMYAKC  I  A+ +F      ++ V+WT MI G + +G    AIE F
Sbjct: 371 FDENIFIASSLVDMYAKCGNIRTAKQIFDRM-RLRDMVSWTAMIMGCALHGQAPDAIELF 429

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAK 282
             M  EG++ N   F ++LTAC+     D   +    +    G    V   +A+ D+  +
Sbjct: 430 EQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGR 489

Query: 283 CGDLDSA 289
            G L+ A
Sbjct: 490 AGRLEEA 496


>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 829

 Score =  526 bits (1356), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 285/780 (36%), Positives = 452/780 (57%), Gaps = 24/780 (3%)

Query: 39  LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP--FK 96
           L RAL      G +   G L E     D    N+++  Y+    +  A+ +F+  P   +
Sbjct: 65  LGRAL-----QGHLLRTGSLLET----DAVVANSLLTLYSKCSAVAAARSVFDGMPVGLR 115

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQ-RGEQF 155
           +  +W+++    S  G + EA  LF +   EG  P+ +TL    + C    L    G   
Sbjct: 116 DLVSWTAMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAV 175

Query: 156 HGYAIKTCF-DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
            G   K  F   +  V   L+DM+AK   +     +F    + +  V WT +IT Y+Q+G
Sbjct: 176 LGLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFE-RTVVVWTLLITRYAQSG 234

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQS 274
           Y  +A+E F DM   G + +Q+T  S+L+AC  + +   G Q+H   L  G E++  V  
Sbjct: 235 YSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSC 294

Query: 275 ALIDMYAKCGD---LDSARRLLEYSEIDNEVSWNSMIVGFARQGFH-KEALSLFKKMHAR 330
            L+DMYAK  +   L +AR +       N ++W +++ G+ ++G    + + LF KM   
Sbjct: 295 GLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNE 354

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
            I+ +  TY S+L   A+  D ++ + +H+  VK+       V NAL+ MYA+ G+++ A
Sbjct: 355 GIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEA 414

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
              F+ + +K+++S++  + G     +Y++      ++ IS          S++SA A +
Sbjct: 415 RHAFDQLYEKNMVSFSGNLDGDGRSNTYQDYQIERMELGISTF-----TFGSLISAAASV 469

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
            +L  GQ++HA+ LK+G  S  ++ NSLV +Y++CG + DA +VFD M+  +VI+WT++I
Sbjct: 470 GMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMI 529

Query: 511 MGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGI 570
            G A++G    AL+ +  M+A G KP+ +T++ +L ACSHAGL +  + +F  M K +G+
Sbjct: 530 SGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGL 589

Query: 571 KPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAAN 630
            P  +HYACM+DLLGRSG + +A   +++M  + DA VWK LL AC+ H ++++GE AAN
Sbjct: 590 IPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAAN 649

Query: 631 NLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFI 690
           ++ +LEP +  PYV LSN+Y+ AG W+  AR+R LM+ + + KE G SW+  ++ +H F 
Sbjct: 650 HVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFR 709

Query: 691 SEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFG 750
           + D  HP   +IY+K++ ++  IK  GYVPD +  LH++ +E KE+ L  HSEK+AVAFG
Sbjct: 710 AGDTSHPQAEEIYTKLETLIREIKVMGYVPDTSVVLHDMSDELKELCLLQHSEKIAVAFG 769

Query: 751 LLTLPQGA-PIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           L++      PIRIFKNLRVC DCH+A+KY+S    R IILRDSNRFH  K G CSCG+YW
Sbjct: 770 LISCTSATKPIRIFKNLRVCVDCHSALKYVSKATGREIILRDSNRFHRMKDGECSCGEYW 829



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 136/273 (49%), Gaps = 11/273 (4%)

Query: 351 DLNNAKSVHSLIVKTG--FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD--KDVISWT 406
           D++  +++   +++TG   E    V N+L+ +Y+K   +  A  VF+ M    +D++SWT
Sbjct: 62  DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWT 121

Query: 407 SLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSAC--AELTVLEFGQQVHAVFL 464
           ++ +  + +G+  EAL+ F +    G+ P+   + +   AC  +EL  L  G  +  VF 
Sbjct: 122 AMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFK 181

Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ 524
                + +SV  +L+ ++AK G +    RVFD +  R V+ WT LI   AQ+G   EA++
Sbjct: 182 LGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVE 241

Query: 525 FYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLL 584
            +  ML  G +PD  T   +L AC+  G     +    S+    G++        ++D+ 
Sbjct: 242 LFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQ-QLHSLALRLGLESDSCVSCGLVDMY 300

Query: 585 GRS---GKLIEAKALLDQMVGEPDATVWKALLS 614
            +S     L  A+ + ++M  + +   W ALLS
Sbjct: 301 AKSHNGQSLHNAREVFNRM-PKHNVMAWTALLS 332


>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
 gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  526 bits (1355), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 292/781 (37%), Positives = 417/781 (53%), Gaps = 112/781 (14%)

Query: 140 LRLCSLKGL--LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP-- 195
           L LC  + L         HG+ I + F L   +V  L+D+Y K      A  LF   P  
Sbjct: 18  LNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQP 77

Query: 196 ------------------------------DGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
                                         D ++ V +  MITGYS    G  AIE FR 
Sbjct: 78  DVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRA 137

Query: 226 MRVEGVESNQFTFPSILTACAAV--SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
           MR    + + FTF S+L+A   +    R  G Q+HG ++  G E    V +AL+ +Y KC
Sbjct: 138 MRWANFQPDDFTFASVLSASTLIFYDERQCG-QMHGTVVKFGIEIFPAVLNALLSVYVKC 196

Query: 284 ----------------------------------------GDLDSARRLLEYSEIDNEVS 303
                                                   GDL  AR +L+       ++
Sbjct: 197 ASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIA 256

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN+MI G+   G  ++AL+LF+KM    +++D+ TY SV++  A        K VH+ I+
Sbjct: 257 WNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYIL 316

Query: 364 KTGFEGYK----FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL----------- 408
           K      +     V N LI +Y K G +D A  +F  M  KD+I+W +L           
Sbjct: 317 KNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRME 376

Query: 409 --------------------ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
                               I+G A +G  E+ALK F+ M++ G  P+    +  ++AC+
Sbjct: 377 EAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACS 436

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
            L  LE G+Q+HA  +  G  S+LSV N+++ +YA+CG +  A  +F +M   D ++W +
Sbjct: 437 VLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNS 496

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
           +I    Q+G G +A++ Y+QML  G  PD  TF+ +L ACSHAGL E    YF SM + Y
Sbjct: 497 MIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENY 556

Query: 569 GIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
           GI PG DHYA MIDL  R+GK  +AK ++D M  E  A +W+ALL+ CR HG+++LG  A
Sbjct: 557 GIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEA 616

Query: 629 ANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHI 688
           A  LF+L P +   YV LSNMY++ G+W D AR RKLM+ RG++KEP CSW E  ++VH+
Sbjct: 617 AEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHV 676

Query: 689 FISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVA 748
           F+ +D  HP    IY+ ++++ L +K+ GY+PD  + LH++E E KE  L+ HSEKLAVA
Sbjct: 677 FLVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYALSTHSEKLAVA 736

Query: 749 FGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDY 808
           FGL+ LPQGA +R+FKNLR+CGDCH A+K++S V  R I++RD  RFHHFK G CSC +Y
Sbjct: 737 FGLMKLPQGATVRVFKNLRICGDCHNAIKFMSKVVGREIVVRDGKRFHHFKNGECSCRNY 796

Query: 809 W 809
           W
Sbjct: 797 W 797



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 153/561 (27%), Positives = 257/561 (45%), Gaps = 85/561 (15%)

Query: 39  LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF--K 96
           +NR +  +  S +   A +LF+++   D     T+I AY+  G L+ A+++FNETP   +
Sbjct: 51  VNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMR 110

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG-EQF 155
           +   ++++I GYS+      A ELF  M+   ++P  +T  +VL   +L    +R   Q 
Sbjct: 111 DTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQM 170

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKC---------KCIFEAEYLFKMFPDGKNHVAWTTM 206
           HG  +K   ++   V+  L+ +Y KC           +  A  LF   P  +N   WTT+
Sbjct: 171 HGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPK-RNEFIWTTL 229

Query: 207 ITGYSQNG-----------------------------YGF--KAIECFRDMRVEGVESNQ 235
           ITGY +NG                             +G    A+  FR MR+ GV+ ++
Sbjct: 230 ITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDE 289

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEAN----VYVQSALIDMYAKCGDLDSARR 291
            T+ S+++ACA       G QVH  IL +    +    + V + LI +Y K G +D AR+
Sbjct: 290 STYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARK 349

Query: 292 LLEYSEIDNEVSWNS-------------------------------MIVGFARQGFHKEA 320
           +     + + ++WN+                               MI G A+ GF ++A
Sbjct: 350 IFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQA 409

Query: 321 LSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDM 380
           L LF +M     + +D+ +   +   +    L N + +H+ IV  G +    V NA+I M
Sbjct: 410 LKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITM 469

Query: 381 YAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVV 440
           YA+ G ++ A  +F  M   D +SW S+I     HG   +A++ +  M   GI PD    
Sbjct: 470 YARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTF 529

Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLVLVYAKCGCINDANRVFDSM 498
            ++LSAC+   ++E G +     L++ G +    D+   ++ ++ + G  +DA  V DSM
Sbjct: 530 LTVLSACSHAGLVEEGNRYFNSMLENYGIAP-GEDHYARMIDLFCRAGKFSDAKNVIDSM 588

Query: 499 --HTRDVITWTALIMGCAQNG 517
               R  I W AL+ GC  +G
Sbjct: 589 PFEARAPI-WEALLAGCRTHG 608



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 206/420 (49%), Gaps = 40/420 (9%)

Query: 55  AGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLD 114
           A +LF++M  R+ F W T+I  Y  +G L  A+++ +    +    W+++I GY ++GL 
Sbjct: 211 ARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLF 270

Query: 115 IEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCF----DLNAFV 170
            +A  LF +M+L G +  + T  +V+  C+  G    G+Q H Y +K       D    V
Sbjct: 271 EDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSV 330

Query: 171 VTGLVDMYAK------CKCIF-------------------------EAEYLFKMFPDGKN 199
              L+ +Y K       + IF                         EA+  F   P+ KN
Sbjct: 331 GNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPE-KN 389

Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG 259
            + WT MI+G +QNG+G +A++ F  M+++G E N + F   +TAC+ + A + G Q+H 
Sbjct: 390 LLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHA 449

Query: 260 CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKE 319
            I+  G ++ + V +A+I MYA+CG +++AR +       + VSWNSMI    + G   +
Sbjct: 450 QIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVK 509

Query: 320 ALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           A+ L+++M    I  D  T+ +VL+ C  + +     +  +S++   G    +     +I
Sbjct: 510 AIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMI 569

Query: 379 DMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           D++ + G    A  V + M  +     W +L+ GC  HG+ +  ++  +  ++  + P H
Sbjct: 570 DLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIE--AAEKLFKLIPQH 627



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 173/357 (48%), Gaps = 9/357 (2%)

Query: 19  IIGPARYTHNVGNSVKPASDL-----NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTM 73
           ++G   + + + N + P  D      N  +  +   G++D A ++F +M  +D  TWNT+
Sbjct: 306 LLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTL 365

Query: 74  IAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQ 133
           ++ Y N+GR+ EAK  F + P KN  TW+ +I G +  G   +A +LF QM+L+GY P+ 
Sbjct: 366 LSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPND 425

Query: 134 YTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKM 193
           Y     +  CS+ G L+ G Q H   +    D    V   ++ MYA+C  +  A  +F  
Sbjct: 426 YAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLT 485

Query: 194 FPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDF 253
            P   + V+W +MI    Q+G+G KAIE +  M  EG+  ++ TF ++L+AC+     + 
Sbjct: 486 MP-FVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEE 544

Query: 254 GAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIVGF 311
           G +    +L + G        + +ID++ + G    A+ +++    +     W +++ G 
Sbjct: 545 GNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGC 604

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
              G     +   +K+  + I   D TY  + N +AS    N+      L+   G +
Sbjct: 605 RTHGNMDLGIEAAEKLF-KLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVK 660



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 93/384 (24%), Positives = 164/384 (42%), Gaps = 66/384 (17%)

Query: 331 DIKIDDFTYPSVLN-CFASNID-LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD 388
           D+++    Y + LN C   N+   + A++VH  ++ +GF+    + N LID+Y K  +  
Sbjct: 6   DVRVLANRYFAQLNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFV 65

Query: 389 CAFMVFNLMQDKDVISWTSL---------------------------------ITGCAYH 415
            A  +F+ +   DVI+ T+L                                 ITG ++ 
Sbjct: 66  YARKLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHM 125

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ----QVHAVFLKSGGCSS 471
                A++ F  MR +   PD    +S+LSA    T++ + +    Q+H   +K G    
Sbjct: 126 NDGHSAIELFRAMRWANFQPDDFTFASVLSAS---TLIFYDERQCGQMHGTVVKFGIEIF 182

Query: 472 LSVDNSLVLVYAKCG---------CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEA 522
            +V N+L+ VY KC           +  A ++FD M  R+   WT LI G  +NG    A
Sbjct: 183 PAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGA 242

Query: 523 LQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMID 582
            +  D M    T+   I +  ++    H GL E+A   F  M ++ G++     Y  +I 
Sbjct: 243 REILDTM----TEQPGIAWNAMISGYLHHGLFEDALTLFRKM-RLLGVQVDESTYTSVIS 297

Query: 583 LLGRS-----GKLIEAKALLDQMVGEPD--ATVWKALLSACRVHGDLELGERAANNLFEL 635
                     GK + A  L +++  + D   +V   L++    +G ++ G R     +E+
Sbjct: 298 ACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVD-GARKI--FYEM 354

Query: 636 EPMNAMPYVQLSNMYSTAGKWEDA 659
              + + +  L + Y  AG+ E+A
Sbjct: 355 PVKDIITWNTLLSGYVNAGRMEEA 378


>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 786

 Score =  526 bits (1355), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 294/746 (39%), Positives = 420/746 (56%), Gaps = 75/746 (10%)

Query: 132 SQYTLDNVLRLCSLKGL-LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           S Y ++N++ + S  G  L   + F    ++T F  N      ++  YAK   +  +   
Sbjct: 48  SVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNT-----VLSAYAKRGDMDSSCEF 102

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P  ++ V+WTTMI GY   G   KAI    +M  EG+E +QFT  ++L + AA   
Sbjct: 103 FDRLPQ-RDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRC 161

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD------------------------- 285
            + G +VH  I+  G   NV V ++L++MYAKCGD                         
Sbjct: 162 LETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIAL 221

Query: 286 ------LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD--IKIDDF 337
                 +D A    E     + V+WNSMI G+ ++G+   AL +F KM  RD  +  D F
Sbjct: 222 HMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKM-LRDSMLSPDRF 280

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYA--------------- 382
           T  SVL+  A+   L   + +HS IV TGF+    V NALI MY+               
Sbjct: 281 TLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQR 340

Query: 383 ------------------KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
                             K G+++ A  +F+ ++D+DV++WT++I G   HG Y EA+  
Sbjct: 341 GTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINL 400

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           F  M      P+   ++++LS  + L  L  G+Q+H   +KSG   S+SV N+L+ +YAK
Sbjct: 401 FRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAK 460

Query: 485 CGCINDANRVFDSMH-TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
            G I  A+R FD +   RD ++WT++I+  AQ+G  +EAL+ ++ ML  G +PD+IT+VG
Sbjct: 461 AGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVG 520

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           +  AC+HAGL    R YF+ M  V  I P   HYACM+DL GR+G L EA+  +++M  E
Sbjct: 521 VFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIE 580

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
           PD   W +LLSACRV+ +++LG+ AA  L  LEP N+  Y  L+N+YS  GKWE+AA++R
Sbjct: 581 PDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIR 640

Query: 664 KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMN 723
           K MK   ++KE G SW+E   +VH F  ED  HP + +IY  + +I   IK+ GYVPD  
Sbjct: 641 KSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTA 700

Query: 724 FALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVY 783
             LH++EEE KE  L +HSEKLA+AFGL++ P    +RI KNLRVC DCHTA+K+IS + 
Sbjct: 701 SVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLV 760

Query: 784 LRHIILRDSNRFHHFKAGNCSCGDYW 809
            R II+RD+ RFHHFK G CSC DYW
Sbjct: 761 GREIIVRDTTRFHHFKDGFCSCRDYW 786



 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 163/543 (30%), Positives = 277/543 (51%), Gaps = 69/543 (12%)

Query: 39  LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF 98
           +N  +  +S +G    A +LF++M  R  F+WNT+++AYA  G +  + + F+  P ++ 
Sbjct: 52  MNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDS 111

Query: 99  FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
            +W+++I GY N G   +A  +  +M  EG  PSQ+TL NVL   +    L+ G++ H +
Sbjct: 112 VSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSF 171

Query: 159 AIKTCFDLNAFVVTGLVDMYAKC------KCIFE-------------------------A 187
            +K     N  V   L++MYAKC      K +F+                         A
Sbjct: 172 IVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLA 231

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILTACA 246
              F+   + ++ V W +MI+GY+Q GY  +A++ F  M R   +  ++FT  S+L+ACA
Sbjct: 232 MAQFEQMAE-RDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACA 290

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE------------ 294
            +     G Q+H  I+++GF+ +  V +ALI MY++CG +++ARRL+E            
Sbjct: 291 NLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGF 350

Query: 295 ------------YSEIDN---------EVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
                        +E  N          V+W +MIVG+ + G + EA++LF+ M   + +
Sbjct: 351 TALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQR 410

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
            + +T  ++L+  +S   L + K +H   VK+G      V+NALI MYAK G++  A   
Sbjct: 411 PNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRA 470

Query: 394 FNLMQ-DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV 452
           F+L++ ++D +SWTS+I   A HG  EEAL+ F  M + G+ PDH+    + SAC    +
Sbjct: 471 FDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGL 530

Query: 453 LEFGQQVHAVFLKSGG-CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALI 510
           +  G+Q   +         +LS    +V ++ + G + +A    + M    DV+TW +L+
Sbjct: 531 VNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLL 590

Query: 511 MGC 513
             C
Sbjct: 591 SAC 593



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 198/452 (43%), Gaps = 92/452 (20%)

Query: 8   ILNFSLRCRSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDG 67
           +LN   +C   ++    +   V   VK  S  N  +      G++D A   FE+M++RD 
Sbjct: 187 LLNMYAKCGDPMMAKVVFDRMV---VKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
            TWN+MI+                               GY+  G D+ A ++F +M  +
Sbjct: 244 VTWNSMIS-------------------------------GYNQRGYDLRALDMFSKMLRD 272

Query: 128 G-YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
               P ++TL +VL  C+    L  GEQ H + + T FD++  V+  L+ MY++C  +  
Sbjct: 273 SMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVET 332

Query: 187 AEYL-------------FKMFPDG-------------------KNHVAWTTMITGYSQNG 214
           A  L             F    DG                   ++ VAWT MI GY Q+G
Sbjct: 333 ARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHG 392

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQS 274
              +AI  FR M  E    N +T  ++L+  +++++   G Q+HG  + SG   +V V +
Sbjct: 393 LYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSN 452

Query: 275 ALIDMYAKCGDLDSARRLLEYSEIDNE-VSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
           ALI MYAK G + SA R  +    + + VSW SMI+  A+ G  +EAL LF+ M    ++
Sbjct: 453 ALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLR 512

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA------------LIDMY 381
            D  TY  V +              H+ +V  G + +  + +             ++D++
Sbjct: 513 PDHITYVGVFSA-----------CTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLF 561

Query: 382 AKQGNLDCAFMVFNLMQ-DKDVISWTSLITGC 412
            + G L  A      M  + DV++W SL++ C
Sbjct: 562 GRAGLLQEAQEFIEKMPIEPDVVTWGSLLSAC 593



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 209/489 (42%), Gaps = 108/489 (22%)

Query: 253 FGAQ-VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
           F AQ VH  ++ SG   +VY+ + L+++Y+K G    AR+L +   +    SWN+++  +
Sbjct: 31  FTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAY 90

Query: 312 ARQGFHKEALSLFKKMHARD-------------------------------IKIDDFTYP 340
           A++G    +   F ++  RD                               I+   FT  
Sbjct: 91  AKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLT 150

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK----------------- 383
           +VL   A+   L   K VHS IVK G  G   V+N+L++MYAK                 
Sbjct: 151 NVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVK 210

Query: 384 --------------QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM- 428
                          G +D A   F  M ++D+++W S+I+G    G    AL  FS M 
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKML 270

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
           R S + PD   ++S+LSACA L  L  G+Q+H+  + +G   S  V N+L+ +Y++CG +
Sbjct: 271 RDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGV 330

Query: 489 ---------------------------------NDANRVFDSMHTRDVITWTALIMGCAQ 515
                                            N+A  +FDS+  RDV+ WTA+I+G  Q
Sbjct: 331 ETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQ 390

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLL-FACSHAGLAENARWYFESMD--KVYGIKP 572
           +G   EA+  +  M+    +P+  T   +L  A S A L    + +  ++   ++Y +  
Sbjct: 391 HGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSV 450

Query: 573 GPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNL 632
                  +I +  ++G +  A    D +  E D   W +++ A   HG  E     A  L
Sbjct: 451 SN----ALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE----EALEL 502

Query: 633 FELEPMNAM 641
           FE   M  +
Sbjct: 503 FETMLMEGL 511



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/230 (21%), Positives = 95/230 (41%), Gaps = 41/230 (17%)

Query: 435 PDHVVVSSILSACAELTVLEF--------GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
           P  + +S++L  C  L              Q VH   +KSG   S+ + N+L+ VY+K G
Sbjct: 4   PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTG 63

Query: 487 CINDANRVFDSM-------------------------------HTRDVITWTALIMGCAQ 515
               A ++FD M                                 RD ++WT +I+G   
Sbjct: 64  YALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKN 123

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
            G+  +A++   +M+  G +P   T   +L + +     E  +     + K+ G++    
Sbjct: 124 IGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKL-GLRGNVS 182

Query: 576 HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELG 625
               ++++  + G  + AK + D+MV + D + W A+++     G ++L 
Sbjct: 183 VSNSLLNMYAKCGDPMMAKVVFDRMVVK-DISSWNAMIALHMQVGQMDLA 231


>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
 gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
          Length = 797

 Score =  526 bits (1354), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 291/783 (37%), Positives = 436/783 (55%), Gaps = 112/783 (14%)

Query: 138 NVLRLCSLKGLLQR--GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF---- 191
           ++L++C L+  +        H + I + F     ++  L+D+Y+K   +  A YLF    
Sbjct: 16  SLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIP 75

Query: 192 ------------------------KMFPDG----KNHVAWTTMITGYSQNGYGFKAIECF 223
                                   K+F D     ++ V +  MIT YS N  G  AIE F
Sbjct: 76  QPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELF 135

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARD-FGAQVHGCILSSGFEANVYVQSALIDMYAK 282
            DM+ +    + +TF S+L A A V+ ++    Q+H  ++ SG      V +ALI  Y K
Sbjct: 136 CDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVK 195

Query: 283 C----------------------------------------GDLDSARRLLEYSEIDNEV 302
           C                                         DLD+A+  L  +     V
Sbjct: 196 CAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGV 255

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           +WN+MI G+A +G + EA  +F+KM    I++D+FT+ SV++  A+       K +H+  
Sbjct: 256 AWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYF 315

Query: 363 VKT----GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD----------------- 401
           +KT      +    VNNALI  Y K G +D A  +FN M ++D                 
Sbjct: 316 LKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCM 375

Query: 402 --------------VISWTSLITGCAYHGSYEEALKYFSDMRISGICP-DHVVVSSILSA 446
                         ++SW  +I+G A  G  EEALK+F+ M++ G  P D+    +I+S 
Sbjct: 376 DEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIIS- 434

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITW 506
           C+ L  L+ G+Q+HA  ++ G  SSLS  N+L+ +YA+CG ++ A+ +F +M   D I+W
Sbjct: 435 CSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISW 494

Query: 507 TALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDK 566
            A+I    Q+G+G +A++ +++ML  G  PD I+F+ ++ ACSHAGL +  R YF+SM  
Sbjct: 495 NAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHN 554

Query: 567 VYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGE 626
           VYG+ P  +HYA +IDLL R+GK  EAK +++ M  EP A +W+ALL+ CR+HG+++LG 
Sbjct: 555 VYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGI 614

Query: 627 RAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQV 686
            AA  LFEL+P +   YV LSNMY+ AG+W D A+VRKLM+ RG++KEPGCSW+E  ++V
Sbjct: 615 EAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKV 674

Query: 687 HIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLA 746
           H F+  D  HP    IY+ +++++L +++ GYVPD    LH+VE + KE  L+ HSEKLA
Sbjct: 675 HSFLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEHELSTHSEKLA 734

Query: 747 VAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCG 806
           VA+G + LP GA +R+FKNLR+CGDCH A K++S V  R I++RD  RFHHF+ G CSCG
Sbjct: 735 VAYGFMKLPHGATVRVFKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCG 794

Query: 807 DYW 809
           DYW
Sbjct: 795 DYW 797



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 150/577 (25%), Positives = 262/577 (45%), Gaps = 88/577 (15%)

Query: 25  YTHNVGNSVKPASD-LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRL 83
           + H + +  +P    LNR +  +S S +++ A  LF+++   D     T+IAAY+ +G L
Sbjct: 36  HAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGDL 95

Query: 84  REAKKLFNETPF--KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLR 141
           + ++K+F++TP   ++   ++++I  YS+      A ELF  MQ + +RP  YT  +VL 
Sbjct: 96  KLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLG 155

Query: 142 LCSLKGLLQRG-EQFHGYAIKTCFDLNAFVVTGLVDMYAKC---------KCIFEAEYLF 191
             +L    ++  +Q H   +K+       V+  L+  Y KC           + EA  LF
Sbjct: 156 ALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLF 215

Query: 192 KMFPDGKNHVAWTTMITGYSQN--------------------------GYG-----FKAI 220
              P+ ++ ++WTT+ITGY +N                          GY       +A 
Sbjct: 216 DEMPN-RDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAF 274

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS----GFEANVYVQSAL 276
           E FR M +  ++ ++FTF S+++ CA       G ++H   L +      +  + V +AL
Sbjct: 275 EMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNAL 334

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWN------------------------------- 305
           I  Y KCG +D A+ +       + VSWN                               
Sbjct: 335 ITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWI 394

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
            MI G A+ GF +EAL  F +M  +  +  D+ +   +   +    L + + +H+ +V+ 
Sbjct: 395 IMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRY 454

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G+E      NALI MYA+ G +D A  +F  M   D ISW ++I     HG   +A++ F
Sbjct: 455 GYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELF 514

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQ----VHAVFLKSGGCSSLSVDNSLVLV 481
            +M   GI PD +   +++SAC+   +++ G++    +H V+   G          ++ +
Sbjct: 515 EEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVY---GVNPDEEHYARIIDL 571

Query: 482 YAKCGCINDANRVFDSMHTRD-VITWTALIMGCAQNG 517
             + G  ++A  V +SM        W AL+ GC  +G
Sbjct: 572 LCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHG 608



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 187/443 (42%), Gaps = 66/443 (14%)

Query: 20  IGPARYTHNVGNSVKPASDL----NRALVDFS-NSGEIDEAGQLFEKMSDRDGFTWNTMI 74
           +G   + + +     PA D+    N AL+ F    G++D A ++F KM +RD  +WN ++
Sbjct: 307 LGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIIL 366

Query: 75  AAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQY 134
           + Y N   + EAK  FNE P KN  +W  +I G +  G   EA + F +M+L+G+ P  Y
Sbjct: 367 SGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDY 426

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
                +  CS+ G L+ G Q H   ++  ++ +      L+ MYA+C  +  A  LF   
Sbjct: 427 AFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINM 486

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV----SA 250
           P   + ++W  MI    Q+G G +AIE F +M  EG+  ++ +F ++++AC+        
Sbjct: 487 P-CVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEG 545

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIV 309
           R +   +H      G   +    + +ID+  + G    A+ ++E    +     W +++ 
Sbjct: 546 RKYFDSMHNVY---GVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLA 602

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           G    G                                 NIDL    +     +K   +G
Sbjct: 603 GCRIHG---------------------------------NIDLGIEAAERLFELKPQHDG 629

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV-----ISWT-------SLITGCAYHGS 417
              +   L +MYA  G  +    V  LM+D+ V      SW        S + G A H  
Sbjct: 630 TYVL---LSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGDANHPE 686

Query: 418 YEEALKYFS----DMRISGICPD 436
             +   Y      +MR  G  PD
Sbjct: 687 VRQIYNYLEQLVLEMRKIGYVPD 709



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 100/420 (23%), Positives = 173/420 (41%), Gaps = 93/420 (22%)

Query: 339 YPSVLN--CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
           Y S+L   C  S I  + A+ VH+ ++ +GF+    + N LID+Y+K   L+ A  +F+ 
Sbjct: 14  YGSLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDE 73

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFS------------------------------ 426
           +   D+++ T+LI   +  G  + + K FS                              
Sbjct: 74  IPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIE 133

Query: 427 ---DMRISGICPDHVVVSSILSACAELTVLE-FGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
              DM+     PD+   +S+L A A +   E   QQ+H   +KSG     SV N+L+  Y
Sbjct: 134 LFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSY 193

Query: 483 AKC---------GCINDANRVFDSMHTRDVITWTALIMGCAQ-----------NGKGK-- 520
            KC           + +A ++FD M  RD ++WT +I G  +           NG  K  
Sbjct: 194 VKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKL 253

Query: 521 ------------------EALQFYDQMLARGTKPDYITFVGLLFACSHAG---LAENARW 559
                             EA + + +M+    + D  TF  ++  C++AG   L +    
Sbjct: 254 GVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHA 313

Query: 560 YFESMDKVYGIKPGPDHYA----CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
           YF  +  V    P PD        +I    + GK+  A+ + ++M  E D   W  +LS 
Sbjct: 314 YF--LKTV--ANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKM-PERDLVSWNIILSG 368

Query: 616 CRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEP 675
              + ++   + A +   E+   N + ++ + +  +  G  E+A +    MK +G   EP
Sbjct: 369 ---YVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGF--EP 423


>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 695

 Score =  526 bits (1354), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 274/696 (39%), Positives = 411/696 (59%), Gaps = 42/696 (6%)

Query: 116 EAFELFWQMQLEGYRPSQYTLDN-VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
           +A  L   M+   ++P+   L N +L L +  G L+  +      +K     + F    L
Sbjct: 40  QAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKR----DIFSWNAL 95

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           +  YAK   I   +  F   P  ++ V++ T I G+S N    +++E F+ M+ EG E  
Sbjct: 96  LSAYAKSGSIQNLKATFDRMP-FRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPT 154

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
           ++T  SIL A A +S   +G Q+HG I+   F  NV++ +AL DMYAKCG+++ AR L +
Sbjct: 155 EYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFD 214

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
                N VSWN MI G+A+ G  ++ + L  +M       D  T  ++            
Sbjct: 215 CLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTI------------ 262

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
                                  I  Y + G +D A  VF+  ++KD++ WT+++ G A 
Sbjct: 263 -----------------------IAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAK 299

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
           +G  E+AL  F++M +  I PD   +SS++S+CA+L  L  GQ VH   + +G  ++L V
Sbjct: 300 NGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLV 359

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
            ++L+ +Y+KCG I+DA  VF+ M TR+V++W A+I+GCAQNG  K+AL+ ++ ML +  
Sbjct: 360 SSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKF 419

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAK 594
           KPD +TF+G+L AC H    E  + YF+S+   +G+ P  DHYACM++LLGR+G++ +A 
Sbjct: 420 KPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAV 479

Query: 595 ALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAG 654
           AL+  M  +PD  +W  LLS C   GD+   E AA +LFEL+P  A+PY+ LSNMY++ G
Sbjct: 480 ALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMG 539

Query: 655 KWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIK 714
           +W+D A VR LMKS+ ++K  G SW+E +++VH F SEDR HP   DIY K++ ++  ++
Sbjct: 540 RWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQ 599

Query: 715 EAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQG-APIRIFKNLRVCGDCH 773
           E G+ P+ N  LH+V E+ K   + +HSEKLA+AFGL+  P G +PIRI KN+R+C DCH
Sbjct: 600 EEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCH 659

Query: 774 TAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             MK+ S +  R IILRDSNRFHHF  G CSC D W
Sbjct: 660 EFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 157/480 (32%), Positives = 251/480 (52%), Gaps = 38/480 (7%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N+ L  ++  G++ +A  LF+KM  RD F+WN +++AYA SG ++  K  F+  PF++  
Sbjct: 62  NQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSV 121

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           ++++ I G+S      E+ ELF +MQ EG+ P++YT+ ++L   +    L+ G+Q HG  
Sbjct: 122 SYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSI 181

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           I   F  N F+   L DMYAKC  I +A +LF      KN V+W  MI+GY++NG   K 
Sbjct: 182 IVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTK-KNLVSWNLMISGYAKNGQPEKC 240

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           I     MR+ G   +Q T  +I+ A                                   
Sbjct: 241 IGLLHQMRLSGHMPDQVTMSTIIAA----------------------------------- 265

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           Y +CG +D ARR+    +  + V W +M+VG+A+ G  ++AL LF +M    I+ D +T 
Sbjct: 266 YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTL 325

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
            SV++  A    L++ ++VH   +  G      V++ALIDMY+K G +D A  VFNLM  
Sbjct: 326 SSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPT 385

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ- 458
           ++V+SW ++I GCA +G  ++AL+ F +M      PD+V    ILSAC     +E GQ+ 
Sbjct: 386 RNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEY 445

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM-HTRDVITWTALIMGCAQNG 517
             ++  + G   +L     +V +  + G I  A  +  +M H  D + W+ L+  C+  G
Sbjct: 446 FDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKG 505



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 150/354 (42%), Gaps = 68/354 (19%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS 109
           G +DEA ++F +  ++D   W  M+  YA +GR  +A  LFNE                 
Sbjct: 270 GRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNE----------------- 312

Query: 110 NYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAF 169
                         M LE   P  YTL +V+  C+    L  G+  HG +I    + N  
Sbjct: 313 --------------MLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLL 358

Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
           V + L+DMY+KC  I +A  +F + P  +N V+W  MI G +QNG+   A+E F +M  +
Sbjct: 359 VSSALIDMYSKCGFIDDARSVFNLMPT-RNVVSWNAMIVGCAQNGHDKDALELFENMLQQ 417

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
             + +  TF  IL+AC   +  + G +    I       N +  +  +D YA        
Sbjct: 418 KFKPDNVTFIGILSACLHCNWIEQGQEYFDSI------TNQHGMTPTLDHYA-------- 463

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
                            M+    R G  ++A++L K M A D   D   + ++L+  ++ 
Sbjct: 464 ----------------CMVNLLGRTGRIEQAVALIKNM-AHD--PDFLIWSTLLSICSTK 504

Query: 350 IDLNNAK-SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV 402
            D+ NA+ +   L          ++   L +MYA  G       V NLM+ K+V
Sbjct: 505 GDIVNAEVAARHLFELDPTIAVPYI--MLSNMYASMGRWKDVASVRNLMKSKNV 556


>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
          Length = 987

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 274/709 (38%), Positives = 415/709 (58%), Gaps = 67/709 (9%)

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
           NAF    L+ +YAK   + +A  +F   PD ++ V+WT MI G +++G  + A++ F DM
Sbjct: 280 NAFTWNSLLSLYAKSGRLPDAHVVFAEMPD-RDAVSWTIMIVGLNRSGRFWDAVKTFLDM 338

Query: 227 RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDL 286
             EG   +QFT  ++L++CAA+ A   G +VH  ++  G  + V V ++++ MY KCGD 
Sbjct: 339 VSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDA 398

Query: 287 DSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI-------------- 332
           ++AR + E  ++ +  SWN M+  +  QG  + A+S+F+ M  R I              
Sbjct: 399 ETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNG 458

Query: 333 ------------------KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
                             + D FT  SVL+  A+   L   K +HS I++TG      + 
Sbjct: 459 LDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIM 518

Query: 375 NALIDMYAKQGNLDCAFMV---------------------------------FNLMQDKD 401
           NALI  YAK G+++ A  +                                 F++M ++D
Sbjct: 519 NALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRD 578

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
           VI+WT++I G   +G  +EA++ F  M + G  P+   ++++LSACA L  L++G+Q+H 
Sbjct: 579 VIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHC 638

Query: 462 VFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGK 520
             ++S    S+SV N+++ VYA+ G +  A RVFD +  R + ITWT++I+  AQ+G G+
Sbjct: 639 KAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGE 698

Query: 521 EALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACM 580
           +A+  +++M+  G KPD+IT+VG+L AC+HAG  +  + Y+E M   +GI P   HYACM
Sbjct: 699 QAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACM 758

Query: 581 IDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNA 640
           +DL  R+G L EA   + +M   PD  VW +LL+ACRV  + +L E AA  L  ++P N+
Sbjct: 759 VDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNS 818

Query: 641 MPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRT 700
             Y  L+N+YS  G+W DAAR+ KL K +G++KE G SW     +VH+F ++D  HP R 
Sbjct: 819 GAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQRD 878

Query: 701 DIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPI 760
            IY K  E+   IK+AG+VPD+N  LH+V++E KE  L+ HSEKLA+AFGL++ P+   +
Sbjct: 879 SIYRKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTL 938

Query: 761 RIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           RI KNLRVC DCHTA+K+IS    R II+RD+ RFHHF+ G CSC DYW
Sbjct: 939 RIMKNLRVCNDCHTAIKFISKFVDREIIVRDATRFHHFRDGYCSCKDYW 987



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 150/529 (28%), Positives = 256/529 (48%), Gaps = 69/529 (13%)

Query: 54  EAGQLFEKM--SDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNY 111
           EA  LF+ +  + R+ FTWN++++ YA SGRL +A  +F E P ++  +W+ +I G +  
Sbjct: 266 EARCLFDDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRS 325

Query: 112 GLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV 171
           G   +A + F  M  EG+ PSQ+TL NVL  C+       G + H + +K        V 
Sbjct: 326 GRFWDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVA 385

Query: 172 TGLVDMYAKC------KCIFE----------------------AEYLFKMFPD--GKNHV 201
             ++ MY KC      + +FE                       E    MF +   ++ V
Sbjct: 386 NSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIV 445

Query: 202 AWTTMITGYSQNGYGFKAIECF-RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
           +W T+I GY+QNG    A++ F R +    +E + FT  S+L+ACA +     G Q+H  
Sbjct: 446 SWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSY 505

Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI---------------------- 298
           IL +G   +  + +ALI  YAK G +++ARR+++ + +                      
Sbjct: 506 ILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTK 565

Query: 299 -----------DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFA 347
                       + ++W +MIVG+ + G + EA+ LF+ M     + +  T  +VL+  A
Sbjct: 566 QAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACA 625

Query: 348 SNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN-LMQDKDVISWT 406
           S   L+  K +H   +++  E    V+NA+I +YA+ G++  A  VF+ +   K+ I+WT
Sbjct: 626 SLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWT 685

Query: 407 SLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
           S+I   A HG  E+A+  F +M   G+ PDH+    +LSACA    ++ G++ +      
Sbjct: 686 SMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNE 745

Query: 467 GG-CSSLSVDNSLVLVYAKCGCINDANRVFDSMHT-RDVITWTALIMGC 513
            G    +S    +V ++A+ G + +A+     M    D + W +L+  C
Sbjct: 746 HGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAAC 794



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 142/496 (28%), Positives = 233/496 (46%), Gaps = 80/496 (16%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  L  +   G+ + A  +FE+M  R   +WN M++ Y + GR+  A  +F     ++  
Sbjct: 386 NSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIV 445

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
           +W+++I GY+  GLD  A + F +M       P  +T+ +VL  C+   +L+ G+Q H Y
Sbjct: 446 SWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSY 505

Query: 159 AIKTCF---------------------------------DLNAFVVTGLVDMYAKCKCIF 185
            ++T                                   DLN    T L++ Y K     
Sbjct: 506 ILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTK 565

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A  +F +  + ++ +AWT MI GY QNG   +A+E FR M + G E N  T  ++L+AC
Sbjct: 566 QAREIFDIM-NNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSAC 624

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE-VSW 304
           A+++  D+G Q+H   + S  E +V V +A+I +YA+ G +  ARR+ +      E ++W
Sbjct: 625 ASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITW 684

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
            SMIV  A+ G  ++A+ LF++M    +K D  TY  VL+  A           H+  V 
Sbjct: 685 TSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACA-----------HAGFVD 733

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            G   Y+ + N    +  +  +  C  MV       D+ +   L+T         EA ++
Sbjct: 734 KGKRYYEQMQNEH-GIVPQMSHYAC--MV-------DLHARAGLLT---------EAHEF 774

Query: 425 FSDMRISGICPDHVVVSSILSAC-----AELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
              M ++   PD VV  S+L+AC     A+L  L  G+ +      SG  S+L+      
Sbjct: 775 IQRMPVA---PDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGAYSALAN----- 826

Query: 480 LVYAKCGCINDANRVF 495
            VY+ CG  NDA R++
Sbjct: 827 -VYSACGRWNDAARIW 841



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 140/274 (51%), Gaps = 4/274 (1%)

Query: 39  LNRALVDFSNSGEIDEAGQLFEK--MSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK 96
           +N  +  ++ SG ++ A ++ ++  ++D +  ++  ++  Y   G  ++A+++F+    +
Sbjct: 518 MNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNR 577

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
           +   W+++I GY   G + EA ELF  M L G  P+ +TL  VL  C+    L  G+Q H
Sbjct: 578 DVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIH 637

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
             AI++  + +  V   ++ +YA+   +  A  +F      K  + WT+MI   +Q+G G
Sbjct: 638 CKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLG 697

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSA 275
            +A+  F +M   GV+ +  T+  +L+ACA     D G + +  + +  G    +   + 
Sbjct: 698 EQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYAC 757

Query: 276 LIDMYAKCGDLDSARRLLEYSEI-DNEVSWNSMI 308
           ++D++A+ G L  A   ++   +  + V W S++
Sbjct: 758 MVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLL 791



 Score = 47.4 bits (111), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 48/231 (20%), Positives = 91/231 (39%), Gaps = 39/231 (16%)

Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV------------------- 481
           + +L  C        G+ +HA  +K+G   S  + N+L+                     
Sbjct: 213 ARLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFD 272

Query: 482 ------------------YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEAL 523
                             YAK G + DA+ VF  M  RD ++WT +I+G  ++G+  +A+
Sbjct: 273 DIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAV 332

Query: 524 QFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDL 583
           + +  M++ G  P   T   +L +C+        R     + K+ G+         ++ +
Sbjct: 333 KTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKL-GLSSCVPVANSVLYM 391

Query: 584 LGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFE 634
            G+ G    A+A+ ++M      + W  ++S     G +EL      N+ E
Sbjct: 392 YGKCGDAETARAVFERMQVR-SVSSWNVMVSLYTHQGRMELAVSMFENMVE 441


>gi|356562443|ref|XP_003549481.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 836

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 294/841 (34%), Positives = 452/841 (53%), Gaps = 116/841 (13%)

Query: 39  LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP--FK 96
           LN  L  +SN G +D+A ++F + +  + FTWNTM+ A+ +SGR+REA+ LF+E P   +
Sbjct: 42  LNNLLHMYSNCGMVDDAFRVFREANHANIFTWNTMLHAFFDSGRMREAENLFDEMPHIVR 101

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQM------QLEGYRPSQYTLDNVLRLCSLKGLLQ 150
           +  +W+++I GY   GL   + + F  M       ++   P  YT    ++ C      +
Sbjct: 102 DSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQNCDPFSYTC--TMKACGCLASTR 159

Query: 151 RGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI-------------------------- 184
              Q H + IK        +   LVDMY KC  I                          
Sbjct: 160 FALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLNIESPSLFCWNSMIYGYS 219

Query: 185 -----FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFP 239
                +EA ++F   P+ ++HV+W T+I+ +SQ G+G + +  F +M   G + N  T+ 
Sbjct: 220 QLYGPYEALHVFTRMPE-RDHVSWNTLISVFSQYGHGIRCLSTFVEMCNLGFKPNFMTYG 278

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
           S+L+ACA++S   +GA +H  IL      + ++ S LIDMYAKCG L  ARR+       
Sbjct: 279 SVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSLGEQ 338

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           N+VSW  +I G A+ G   +AL+LF +M    + +D+FT  ++L   +        + +H
Sbjct: 339 NQVSWTCLISGVAQFGLRDDALALFNQMRQASVVLDEFTLATILGVCSGQNYAATGELLH 398

Query: 360 SLIVKTGFEGYKFVNNALIDMYAK-------------------------------QGNLD 388
              +K+G + +  V NA+I MYA+                                G++D
Sbjct: 399 GYAIKSGMDSFVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGDID 458

Query: 389 CAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
            A   F++M +++VI+W S+++    HG  EE +K +  MR   + PD V  ++ + ACA
Sbjct: 459 RARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACA 518

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
           +L  ++ G QV +   K G  S +SV NS+V +Y++CG I +A +VFDS+H +++I+W A
Sbjct: 519 DLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVKNLISWNA 578

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
           ++   AQNG G +A++ Y+ ML    KPD+I++V +L                       
Sbjct: 579 MMAAFAQNGLGNKAIETYEDMLRTECKPDHISYVAVL----------------------- 615

Query: 569 GIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
                        DLLGR+G L +AK L+D M  +P+ATVW ALL ACR+H D  L E A
Sbjct: 616 ------------SDLLGRAGLLDQAKNLIDGMPFKPNATVWGALLGACRIHHDSILAETA 663

Query: 629 ANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHI 688
           A  L EL   ++  YV L+N+Y+ +G+ E+ A +RKLMK +GIRK PGCSW+E +++VH+
Sbjct: 664 AKKLMELNVEDSGGYVLLANIYAESGELENVADMRKLMKVKGIRKSPGCSWIEVDNRVHV 723

Query: 689 FISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVA 748
           F  ++  HP   ++Y K++E+M  I++ G    +    H  ++        YHSEKLA A
Sbjct: 724 FTVDETSHPQINEVYVKLEEMMKKIEDTGRYVSIVSCAHRSQK--------YHSEKLAFA 775

Query: 749 FGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDY 808
           FGLL+LP   PI++ KNLRVC DCH  +K +S V  R +I+RD  RFHHFK G CSC DY
Sbjct: 776 FGLLSLPPWMPIQVTKNLRVCNDCHLVIKLLSLVTSRELIMRDGFRFHHFKDGFCSCRDY 835

Query: 809 W 809
           W
Sbjct: 836 W 836



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 215/498 (43%), Gaps = 87/498 (17%)

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           ++H  ++ SG +A++++ + L+ MY+ CG +D A R+   +   N  +WN+M+  F   G
Sbjct: 25  KLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFRVFREANHANIFTWNTMLHAFFDSG 84

Query: 316 FHKEALSLFKKM----------------------HARDIKI---------------DDFT 338
             +EA +LF +M                       A  IK                D F+
Sbjct: 85  RMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQNCDPFS 144

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG------------- 385
           Y   +           A  +H+ ++K        + N+L+DMY K G             
Sbjct: 145 YTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLNIE 204

Query: 386 --NLDC----------------AFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
             +L C                A  VF  M ++D +SW +LI+  + +G     L  F +
Sbjct: 205 SPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTFVE 264

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           M   G  P+ +   S+LSACA ++ L++G  +HA  L+        + + L+ +YAKCGC
Sbjct: 265 MCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGC 324

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           +  A RVF+S+  ++ ++WT LI G AQ G   +AL  ++QM       D  T   +L  
Sbjct: 325 LALARRVFNSLGEQNQVSWTCLISGVAQFGLRDDALALFNQMRQASVVLDEFTLATILGV 384

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYA----CMIDLLGRSGKLIEAKALLDQMVGE 603
           CS    A         +   Y IK G D +      +I +  R G   E  +L  + +  
Sbjct: 385 CSGQNYAATGE-----LLHGYAIKSGMDSFVPVGNAIITMYARCGD-TEKASLAFRSMPL 438

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEP-MNAMPYVQLSNMYSTAGKWEDAARV 662
            D   W A+++A   +GD++     A   F++ P  N + +  + + Y   G  E+  ++
Sbjct: 439 RDTISWTAMITAFSQNGDID----RARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKL 494

Query: 663 RKLMKSRGIRKEPGCSWV 680
             LM+S+ ++ +    WV
Sbjct: 495 YVLMRSKAVKPD----WV 508



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/330 (23%), Positives = 131/330 (39%), Gaps = 74/330 (22%)

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
           A+ +H+ ++ +G +   F+ N L+ MY+  G +D AF VF      ++ +W +++     
Sbjct: 23  ARKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFRVFREANHANIFTWNTMLHAFFD 82

Query: 415 HGSYEEALKYFSDM------------RISGICPDHVVVSSI------------------- 443
            G   EA   F +M             ISG C + +   SI                   
Sbjct: 83  SGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQNCDP 142

Query: 444 ------LSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN-------- 489
                 + AC  L    F  Q+HA  +K    +   + NSLV +Y KCG I         
Sbjct: 143 FSYTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLN 202

Query: 490 -----------------------DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFY 526
                                  +A  VF  M  RD ++W  LI   +Q G G   L  +
Sbjct: 203 IESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTF 262

Query: 527 DQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY--ACMIDLL 584
            +M   G KP+++T+  +L AC+      + +W      ++  ++   D +  + +ID+ 
Sbjct: 263 VEMCNLGFKPNFMTYGSVLSACAS---ISDLKWGAHLHARILRMEHSLDAFLGSGLIDMY 319

Query: 585 GRSGKLIEAKALLDQMVGEPDATVWKALLS 614
            + G L  A+ + + + GE +   W  L+S
Sbjct: 320 AKCGCLALARRVFNSL-GEQNQVSWTCLIS 348


>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g68930-like [Cucumis
           sativus]
          Length = 695

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 273/696 (39%), Positives = 410/696 (58%), Gaps = 42/696 (6%)

Query: 116 EAFELFWQMQLEGYRPSQYTLDN-VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
           +A  L   M+   ++P+   L N +L L +  G L+  +      +K     + F    L
Sbjct: 40  QAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKR----DXFSWNAL 95

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           +  YAK   I   +  F   P  ++ V++ T I G+S N    +++E F+ M+ EG E  
Sbjct: 96  LSAYAKSGSIQNLKATFDRMP-FRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPT 154

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
           ++T  SIL A A +    +G Q+HG I+   F  NV++ +AL DMYAKCG+++ AR L +
Sbjct: 155 EYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFD 214

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
                N VSWN MI G+A+ G  ++ + L  +M       D  T  ++            
Sbjct: 215 CLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTI------------ 262

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
                                  I  Y + G +D A  VF+  ++KD++ WT+++ G A 
Sbjct: 263 -----------------------IAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAK 299

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
           +G  E+AL  F++M +  I PD   +SS++S+CA+L  L  GQ VH   + +G  ++L V
Sbjct: 300 NGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLV 359

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
            ++L+ +Y+KCG I+DA  VF+ M TR+V++W A+I+GCAQNG  K+AL+ ++ ML +  
Sbjct: 360 SSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKF 419

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAK 594
           KPD +TF+G+L AC H    E  + YF+S+   +G+ P  DHYACM++LLGR+G++ +A 
Sbjct: 420 KPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAV 479

Query: 595 ALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAG 654
           AL+  M  +PD  +W  LLS C   GD+   E AA +LFEL+P  A+PY+ LSNMY++ G
Sbjct: 480 ALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMG 539

Query: 655 KWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIK 714
           +W+D A VR LMKS+ ++K  G SW+E +++VH F SEDR HP   DIY K++ ++  ++
Sbjct: 540 RWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQ 599

Query: 715 EAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQG-APIRIFKNLRVCGDCH 773
           E G+ P+ N  LH+V E+ K   + +HSEKLA+AFGL+  P G +PIRI KN+R+C DCH
Sbjct: 600 EEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCH 659

Query: 774 TAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             MK+ S +  R IILRDSNRFHHF  G CSC D W
Sbjct: 660 EFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 157/480 (32%), Positives = 251/480 (52%), Gaps = 38/480 (7%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N+ L  ++  G++ +A  LF+KM  RD F+WN +++AYA SG ++  K  F+  PF++  
Sbjct: 62  NQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSV 121

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           ++++ I G+S      E+ ELF +MQ EG+ P++YT+ ++L   +    L+ G+Q HG  
Sbjct: 122 SYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSI 181

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           I   F  N F+   L DMYAKC  I +A +LF      KN V+W  MI+GY++NG   K 
Sbjct: 182 IVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTK-KNLVSWNLMISGYAKNGQPEKC 240

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           I     MR+ G   +Q T  +I+ A                                   
Sbjct: 241 IGLLHQMRLSGHMPDQVTMSTIIAA----------------------------------- 265

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           Y +CG +D ARR+    +  + V W +M+VG+A+ G  ++AL LF +M    I+ D +T 
Sbjct: 266 YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTL 325

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
            SV++  A    L++ ++VH   +  G      V++ALIDMY+K G +D A  VFNLM  
Sbjct: 326 SSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPT 385

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ- 458
           ++V+SW ++I GCA +G  ++AL+ F +M      PD+V    ILSAC     +E GQ+ 
Sbjct: 386 RNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEY 445

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM-HTRDVITWTALIMGCAQNG 517
             ++  + G   +L     +V +  + G I  A  +  +M H  D + W+ L+  C+  G
Sbjct: 446 FDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKG 505



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 151/354 (42%), Gaps = 68/354 (19%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS 109
           G +DEA ++F +  ++D   W  M+  YA +GR  +A  LFNE                 
Sbjct: 270 GRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNE----------------- 312

Query: 110 NYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAF 169
                         M LE   P  YTL +V+  C+    L  G+  HG +I    + N  
Sbjct: 313 --------------MLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLL 358

Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
           V + L+DMY+KC  I +A  +F + P  +N V+W  MI G +QNG+   A+E F +M  +
Sbjct: 359 VSSALIDMYSKCGFIDDARSVFNLMPT-RNVVSWNAMIVGCAQNGHDKDALELFENMLQQ 417

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
             + +  TF  IL+AC   +  + G +    I      +N +  +  +D YA        
Sbjct: 418 KFKPDNVTFIGILSACLHCNWIEQGQEYFDSI------SNQHGMTPTLDHYA-------- 463

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
                            M+    R G  ++A++L K M A D   D   + ++L+  ++ 
Sbjct: 464 ----------------CMVNLLGRTGRIEQAVALIKNM-AHD--PDFLIWSTLLSICSTK 504

Query: 350 IDLNNAK-SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV 402
            D+ NA+ +   L          ++   L +MYA  G       V NLM+ K+V
Sbjct: 505 GDIVNAEVAARHLFELDPTIAVPYI--MLSNMYASMGRWKDVASVRNLMKSKNV 556


>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
 gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
          Length = 687

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 268/688 (38%), Positives = 406/688 (59%), Gaps = 3/688 (0%)

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M LEG + +  T  NVL        L++G+  H    ++   L+ FV T LV+ Y KC  
Sbjct: 1   MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A  +F   P  ++   W +MI+ YS +    +A   F+ M+ EG   ++ TF SIL 
Sbjct: 61  LTDARKVFDGMP-CRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILD 119

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC        G  V   I  + FE +++V +ALI MYA+C   ++A ++    +  N ++
Sbjct: 120 ACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLIT 179

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           W+++I  FA  G   EAL  F+ M    I  +  T+ S+LN F +   L     +H LI 
Sbjct: 180 WSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLIT 239

Query: 364 KTGFEGYKFVNNALIDMYAK--QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           + G +    ++NAL+++Y +   G LD A ++   M ++ + +W  LI G   HG   EA
Sbjct: 240 EHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREA 299

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           L+ +  +++  I  D V   S+L+AC   T L  G+ +H+  ++ G  S + V N+L  +
Sbjct: 300 LETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNM 359

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           Y+KCG + +A R+FDSM  R  ++W  ++   AQ+G+ +E L+   +M   G K + ITF
Sbjct: 360 YSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITF 419

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
           V +L +CSHAGL      YF S+    GI+   +HY C++DLLGR+GKL EA+  + +M 
Sbjct: 420 VSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMP 479

Query: 602 GEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
            EP+   W +LL ACRVH DL+ G+ AA  L EL+P N+   V LSN+YS  G W++AA+
Sbjct: 480 SEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAAK 539

Query: 662 VRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPD 721
           +R+ M SR ++K PG S ++  ++VH F   D  HP   +IY K++E+   ++EAGYVPD
Sbjct: 540 LRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPD 599

Query: 722 MNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISA 781
               LH+V+EE KE  LAYHSEKLA+AFGL++ P+ + + IFKNLRVC DCHTA K+IS 
Sbjct: 600 TKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPEKSSLHIFKNLRVCEDCHTATKFISK 659

Query: 782 VYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +  R I++RD++RFHHF+ G+CSC DYW
Sbjct: 660 ITGREIVVRDNHRFHHFRDGSCSCKDYW 687



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/452 (29%), Positives = 231/452 (51%), Gaps = 5/452 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F    ++  Y   G L +A+K+F+  P ++  TW+S+I  YS      EAF +F +MQ
Sbjct: 44  DVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQ 103

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            EG R  + T  ++L  C     LQ G+       +T F+L+ FV T L+ MYA+C+   
Sbjct: 104 HEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPE 163

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A  +F      KN + W+ +IT ++ +G+  +A+  FR M+ EG+  N+ TF S+L   
Sbjct: 164 NAAQVFGRMKQ-KNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGF 222

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC--GDLDSARRLLEYSEIDNEVS 303
              S  +  +++H  I   G +    + +AL+++Y +C  G+LD A  +L+  +     +
Sbjct: 223 TTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITA 282

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN +I G+   G  +EAL  ++++    I +D  T+ SVLN   S+  L   K +HS  V
Sbjct: 283 WNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAV 342

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           + G +    V NAL +MY+K G+++ A  +F+ M  +  +SW  ++   A HG  EE LK
Sbjct: 343 ECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLK 402

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFG-QQVHAVFLKSGGCSSLSVDNSLVLVY 482
               M   G+  + +   S+LS+C+   ++  G Q  H++    G          LV + 
Sbjct: 403 LIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLL 462

Query: 483 AKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
            + G + +A +    M +  +++TW +L+  C
Sbjct: 463 GRAGKLQEAEKYISKMPSEPEIVTWASLLGAC 494



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 180/354 (50%), Gaps = 5/354 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F    +I  YA       A ++F     KN  TWS++I  ++++G   EA   F  MQ
Sbjct: 145 DLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQ 204

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC-- 183
            EG  P++ T  ++L   +    L+   + H    +   D    +   LV++Y +C+   
Sbjct: 205 QEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGE 264

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +  AE + +   D +   AW  +I GY+ +G   +A+E ++ +++E +  ++ TF S+L 
Sbjct: 265 LDVAEVILQEM-DEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLN 323

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC + ++   G  +H   +  G +++V V++AL +MY+KCG +++ARR+ +   I + VS
Sbjct: 324 ACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVS 383

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLI 362
           WN M+  +A+ G  +E L L +KM    +K++  T+ SVL +C  + +     +  HSL 
Sbjct: 384 WNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLG 443

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM-QDKDVISWTSLITGCAYH 415
              G E        L+D+  + G L  A    + M  + ++++W SL+  C  H
Sbjct: 444 HDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVH 497



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 119/278 (42%), Gaps = 37/278 (13%)

Query: 36  ASDLNRALVDF---SNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE 92
            + ++ ALV+      +GE+D A  + ++M ++    WN +I  Y   GR R        
Sbjct: 246 TTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSR-------- 297

Query: 93  TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
                                  EA E + ++QLE     + T  +VL  C+    L  G
Sbjct: 298 -----------------------EALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEG 334

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
           +  H  A++   D +  V   L +MY+KC  +  A  +F   P  ++ V+W  M+  Y+Q
Sbjct: 335 KMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPI-RSAVSWNGMLQAYAQ 393

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ-VHGCILSSGFEANVY 271
           +G   + ++  R M  EGV+ N  TF S+L++C+       G Q  H      G E    
Sbjct: 394 HGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTE 453

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEIDNE-VSWNSMI 308
               L+D+  + G L  A + +     + E V+W S++
Sbjct: 454 HYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLL 491


>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 818

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 278/759 (36%), Positives = 447/759 (58%), Gaps = 14/759 (1%)

Query: 58  LFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNET-PFKNFFTWSSLIYGYSNYGLDIE 116
           L  ++ D D    N+++  Y+  G +  A+++F++    ++  +W+++    +  G + E
Sbjct: 67  LRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMASCLARNGAERE 126

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQ-RGEQFHGYAIKTCF-DLNAFVVTGL 174
           +  L  +M   G RP+ +TL    R C  + L +  G    G+ +KT F   +  V   L
Sbjct: 127 SLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGFWGTDVSVGCAL 186

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           +DM+A+   +  A+ +F    + +  V WT +IT Y Q G   K +E F  M  +G E +
Sbjct: 187 IDMFARNGDLVAAQRVFDGLIE-RTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPD 245

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG---DLDSARR 291
            ++  S+++AC  + +   G Q+H   L  G  ++  V   L+DMYAK      ++ AR+
Sbjct: 246 GYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARK 305

Query: 292 LLEYSEIDNEVSWNSMIVGFARQGFHKE-ALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
           + +     N +SW ++I G+ + G  +   ++LF++M    I+ +  TY ++L   A+  
Sbjct: 306 VFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLS 365

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           D ++ + +H+ ++KT       V NAL+ MYA+ G ++ A   F+ + + +++S +  + 
Sbjct: 366 DQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVE 425

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
               + S    ++   D    G+       +S+LSA A + +L  GQ++HA+ +K+G  S
Sbjct: 426 TERNNASCSSKIEGMDD----GVST--FTFASLLSAAASVGLLTKGQKLHALSMKAGFRS 479

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
              + NSLV +YA+CG + DA R FD M   +VI+WT++I G A++G  K+AL  +  M+
Sbjct: 480 DQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMI 539

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKL 590
             G KP+ +T++ +L ACSH GL +  + +F SM K +G+ P  +HYAC++DLL RSG +
Sbjct: 540 LAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLV 599

Query: 591 IEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMY 650
            EA+  +++M  + DA VWK LLSACR +G+ E+GE AAN++  LEP +  PYV LSN+Y
Sbjct: 600 EEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAANHVINLEPRDPAPYVLLSNLY 659

Query: 651 STAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIM 710
           + AG W++ AR+R LM+ + + KE G SW++  + +H F + D  HPL  DIY+K+  ++
Sbjct: 660 ADAGLWDEVARIRSLMRDKNLSKETGLSWMDVGNTIHEFRAGDTSHPLAIDIYAKLVTLI 719

Query: 711 LLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCG 770
             IK+ GYVPD +  LH++ EE KE  L  HSEK+AVAFGL+T     P+RIFKNLRVC 
Sbjct: 720 REIKDIGYVPDTSIVLHDMSEELKEQYLLQHSEKIAVAFGLITTSATKPMRIFKNLRVCA 779

Query: 771 DCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           DCH+A+KYIS    R IILRDSNRFH  K G CSCG+YW
Sbjct: 780 DCHSAIKYISKSTGREIILRDSNRFHRMKDGICSCGEYW 818



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 57/115 (49%), Gaps = 5/115 (4%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF----KNFFTW 101
           ++  G +++A + F++M D +  +W ++I+  A  G  ++A  +F++        N  T+
Sbjct: 491 YARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTY 550

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
            +++   S+ GL  E  E F  MQ + G  P       ++ L +  GL++   QF
Sbjct: 551 IAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQF 605


>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 272/723 (37%), Positives = 411/723 (56%), Gaps = 8/723 (1%)

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE 153
           P +N  +W+SLI GY+  G   E   LF + ++   R  ++T  N L +C     L+ G 
Sbjct: 2   PKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGR 61

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQN 213
             H     +       +   L+DMY KC  I  A  +F+   D  + V+W ++I GY + 
Sbjct: 62  LIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFES-ADELDSVSWNSLIAGYVRI 120

Query: 214 GYGFKAIECFRDMRVEGVESNQFTFPSILTACAA--VSARDFGAQVHGCILSSGFEANVY 271
           G   + +     M   G+  N +   S L AC +   S+ + G  +HGC +  G + +V 
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVV 180

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR-----QGFHKEALSLFKK 326
           V +AL+D YAK GDL+ A ++ +     N V +N+MI GF +       F  EA+ LF +
Sbjct: 181 VGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFE 240

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
           M +R +K  +FT+ S+L   ++       K +H+ I K   +  +F+ NAL+++Y+  G+
Sbjct: 241 MQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGS 300

Query: 387 LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSA 446
           ++     F+     DV+SWTSLI G   +G +E  L  F ++  SG  PD   +S +LSA
Sbjct: 301 IEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSA 360

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITW 506
           CA L  ++ G+Q+HA  +K+G  +   + NS + +YAKCG I+ AN  F      D+++W
Sbjct: 361 CANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSW 420

Query: 507 TALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDK 566
           + +I   AQ+G  KEA+  ++ M   G  P++ITF+G+L ACSH GL E    YFE M K
Sbjct: 421 SVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKK 480

Query: 567 VYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGE 626
            +GI P   H AC++DLLGR+G+L EA++ +     E D  +W++LLSACRVH   + G+
Sbjct: 481 DHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGK 540

Query: 627 RAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQV 686
           R A  + ELEP  A  YV L N+Y+ AG    A  +R LMK RG++KEPG SW+E  + V
Sbjct: 541 RVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVV 600

Query: 687 HIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLA 746
           H F++ DR HP    IY +++E++  IK+  Y+ +   +  +  +      ++YHSEKLA
Sbjct: 601 HSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYIDEKLVSDASEPKHKDNSMVSYHSEKLA 660

Query: 747 VAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCG 806
           V FG+++LP+ AP+R+ KNLR C  CH  MK  S +  R IILRD  RFH F+ G+CSCG
Sbjct: 661 VTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGSCSCG 720

Query: 807 DYW 809
           DYW
Sbjct: 721 DYW 723



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 134/453 (29%), Positives = 239/453 (52%), Gaps = 12/453 (2%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N++I  Y   GR+  A+ +F      +  +W+SLI GY   G + E   L  +M   G  
Sbjct: 80  NSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLN 139

Query: 131 PSQYTLDNVLRLC--SLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
            + Y L + L+ C  +    ++ G+  HG A+K   DL+  V T L+D YAK   + +A 
Sbjct: 140 LNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDAT 199

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQ-----NGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
            +FK+ PD  N V +  MI G+ Q     + +  +A+  F +M+  G++ ++FTF SIL 
Sbjct: 200 KIFKLMPD-PNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILK 258

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC+ + A + G Q+H  I     +++ ++ +AL+++Y+  G ++   +    +   + VS
Sbjct: 259 ACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVS 318

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           W S+IVG  + G  +  L+LF ++     K D+FT   +L+  A+   + + + +H+  +
Sbjct: 319 WTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAI 378

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           KTG   +  + N+ I MYAK G++D A M F   ++ D++SW+ +I+  A HG  +EA+ 
Sbjct: 379 KTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVD 438

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV-- 481
            F  M+ SGI P+H+    +L AC+   ++E G +   +  K  G +  +V +S  +V  
Sbjct: 439 LFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITP-NVKHSACIVDL 497

Query: 482 YAKCGCINDANR-VFDSMHTRDVITWTALIMGC 513
             + G + +A   + DS    D + W +L+  C
Sbjct: 498 LGRAGRLAEAESFIMDSGFEGDPVMWRSLLSAC 530



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 123/257 (47%), Gaps = 7/257 (2%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            Q+F+     D F  N ++  Y+ SG + +  K F+ TP  +  +W+SLI G+   G   
Sbjct: 274 AQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFE 333

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
               LF ++   G +P ++T+  +L  C+    ++ GEQ H YAIKT       +    +
Sbjct: 334 GGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQI 393

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNH--VAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
            MYAKC  I  A   FK   + KN   V+W+ MI+  +Q+G   +A++ F  M+  G+  
Sbjct: 394 CMYAKCGDIDSANMTFK---ETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAP 450

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRL 292
           N  TF  +L AC+     + G +    +    G   NV   + ++D+  + G L  A   
Sbjct: 451 NHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESF 510

Query: 293 LEYSEIDNE-VSWNSMI 308
           +  S  + + V W S++
Sbjct: 511 IMDSGFEGDPVMWRSLL 527



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 12/225 (5%)

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
           M  ++V+SW SLI+G    G Y E +  F + R+S +  D    S+ LS C     L  G
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
           + +HA+   SG    + + NSL+ +Y KCG I+ A  VF+S    D ++W +LI G  + 
Sbjct: 61  RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120

Query: 517 GKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPGP 574
           G   E L+   +ML  G   +       L AC       N     E    ++G  +K G 
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKAC-----GSNFSSSIECGKMLHGCAVKLGL 175

Query: 575 DH----YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
           D        ++D   + G L +A  +  +++ +P+  ++ A+++ 
Sbjct: 176 DLDVVVGTALLDTYAKIGDLEDATKIF-KLMPDPNVVMYNAMIAG 219


>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
 gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
          Length = 781

 Score =  524 bits (1349), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 281/783 (35%), Positives = 448/783 (57%), Gaps = 9/783 (1%)

Query: 34  KPASDLNRALVDFSNSGE-IDEAGQLFEKMSDRDGFTWNTM-----IAAYANSGRLREAK 87
           KP +    AL+   +S + +D   ++   + DR GF  N +     I  YA  G + EA+
Sbjct: 1   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDR-GFEQNNLVCGHLIQMYAQCGSVPEAQ 59

Query: 88  KLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKG 147
           ++F     K+ F W+ +I  Y   G    A  +F+QMQ E   P++ T   +L  C+   
Sbjct: 60  QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 119

Query: 148 LLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
            L+ G + HG  ++  F+ + FV T L++MY KC  +  A   FK   + ++ V+WT MI
Sbjct: 120 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRL-EHRDVVSWTAMI 178

Query: 208 TGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFE 267
               Q+     A   +R M+++GV  N+ T  ++  A    +    G  V+G + S   E
Sbjct: 179 AACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVME 238

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM 327
           ++V V ++ ++M+   G L  ARRL E     + V+WN +I  + +     EA+ LF ++
Sbjct: 239 SDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRL 298

Query: 328 HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL 387
               +K +D T+  +LN + S   L   K +H L+ + G++    V  AL+ +Y +    
Sbjct: 299 QQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAP 358

Query: 388 DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSAC 447
             A+ +F  M  KDVI+WT +    A +G  +EAL+ F +M++ G  P    + ++L  C
Sbjct: 359 GQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTC 418

Query: 448 AELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWT 507
           A L  L+ G+Q+H+  +++     + V+ +L+ +Y KCG + +A  VF+ M  RD++ W 
Sbjct: 419 AHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWN 478

Query: 508 ALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKV 567
           +++   AQ+G   E LQ ++QM   G K D ++FV +L A SH+G   +   YF +M + 
Sbjct: 479 SMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQD 538

Query: 568 YGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG-EPDATVWKALLSACRVHGDLELGE 626
           + I P P+ Y C++DLLGR+G++ EA  ++ ++ G  PD  +W  LL ACR H   +  +
Sbjct: 539 FSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAK 598

Query: 627 RAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQV 686
            AA  + E +P ++  YV LSN+Y+ AG W+   R+RKLM+SRG++KEPG S +E  ++V
Sbjct: 599 AAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRV 658

Query: 687 HIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLA 746
           H F+  DR HP R  IY+++D +   ++ AGY+PD    LH+VE+E KE  L YHSE+LA
Sbjct: 659 HEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLA 718

Query: 747 VAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCG 806
           +AFGL++ P G P+R+ KNLRVC DCHTA KYIS +  R I++RD++RFH+FK G CSC 
Sbjct: 719 IAFGLISTPPGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCK 778

Query: 807 DYW 809
           DYW
Sbjct: 779 DYW 781



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 82/197 (41%), Gaps = 48/197 (24%)

Query: 21  GPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           G   ++H + N  +    +  AL++ +   G++ EA  +FEKM+ RD   WN+M+ AYA 
Sbjct: 427 GRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQ 486

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
            G   E  +LFN                               QMQL+G +    +  +V
Sbjct: 487 HGYYDETLQLFN-------------------------------QMQLDGVKADAVSFVSV 515

Query: 140 LRLCSLKGLLQRGEQF-----HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA-EYLFKM 193
           L   S  G +  G Q+       ++I    +L   V    VD+  +   I EA + + K+
Sbjct: 516 LSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCV----VDLLGRAGRIQEAVDIVLKL 571

Query: 194 ---FPDGKNHVAWTTMI 207
               PDG   + W T++
Sbjct: 572 SGCLPDG---ILWMTLL 585


>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
 gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
          Length = 785

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 271/753 (35%), Positives = 435/753 (57%), Gaps = 13/753 (1%)

Query: 68  FTWNTMIAAYAN--SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           F  N+++AAY     G    A +L +E P +N  +++ LI  YS  GL   A E F + +
Sbjct: 35  FLRNSLLAAYCRLGVGAPLHAARLIDEMPRRNAVSYNLLISSYSRAGLPGRALETFARAR 94

Query: 126 LE-GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
              G R  ++T    L  CS    L+ G+  H   +        F+   L  MYA C  +
Sbjct: 95  AAAGLRVDRFTYAAALAACSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEM 154

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            EA  +F    +  + V+W ++++GY + G   + ++ F  M   G+  N F   SI+  
Sbjct: 155 GEARRVFDAAEE-HDDVSWNSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKC 213

Query: 245 CAAVS--ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           CA+ S   R     VHGC++ +G +A++++ SA+IDMYAK G L +A  L +     N +
Sbjct: 214 CASGSDVGRHIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVI 273

Query: 303 SWNSMIVGFAR------QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
            +N+MI GF R      +   +EALSL+ +M +R ++  +FT+ S+L       +    K
Sbjct: 274 VFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGK 333

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H  ++K  F    ++ +ALID+Y+  G ++  +  F  +  +D+++WTS+I+GC  + 
Sbjct: 334 QIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNE 393

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
            +E+AL+ F +    G+ PD   +SS+++ACA L V   G+Q+  + +K G     ++ N
Sbjct: 394 LFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGN 453

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           S + + A+ G ++   R F  M +RDV++W+A+I   AQ+G  ++AL+ +++M+     P
Sbjct: 454 SFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAP 513

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           + +TF+ +L ACSH GL ++   Y+E M   YG+ P   H  C++DLLGR+G+L +A+A 
Sbjct: 514 NEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAF 573

Query: 597 LDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
           +       DA VW++LL++CR+HGD+E G+  A+ + +LEP ++  YV L NMY  AG+ 
Sbjct: 574 IRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADQIMDLEPTSSASYVILYNMYLDAGEL 633

Query: 657 EDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA 716
             A++ R LMK RG++KEPG SW+E  S VH F++ D+ HP    IY K+ E++  I++ 
Sbjct: 634 SLASKTRDLMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYKKLAEMLSKIEKL 693

Query: 717 GYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAM 776
               + +     +    + + +  HSEK+AVAFG++ LPQ APIR+ KNLRVC DCH+ M
Sbjct: 694 ANTDNASTGSDGISSSEQNL-VGCHSEKIAVAFGMIHLPQSAPIRVMKNLRVCRDCHSTM 752

Query: 777 KYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           K IS    R IILRD  RFHHF+ G+CSCGDYW
Sbjct: 753 KLISGSENREIILRDGIRFHHFRGGSCSCGDYW 785



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 182/376 (48%), Gaps = 31/376 (8%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY----SNYGLDI--EA 117
           D D F  + MI  YA  G L  A  LF   P  N   ++++I G+    +  G ++  EA
Sbjct: 238 DADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREA 297

Query: 118 FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
             L+ +MQ  G +PS++T  ++LR C+L G    G+Q HG  +K  F  + ++ + L+D+
Sbjct: 298 LSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDL 357

Query: 178 YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
           Y+   C+ +    F+  P  ++ V WT+MI+G  QN    KA+  F++    G++ + FT
Sbjct: 358 YSDSGCMEDGYRCFRSLPK-QDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFT 416

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
             S++ ACA+++    G Q+    +  GF     + ++ I M A+ GD+D+  R  +  E
Sbjct: 417 MSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEME 476

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
             + VSW+++I   A+ G  ++AL +F +M    +  ++ T+ +VL   +          
Sbjct: 477 SRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACS---------- 526

Query: 358 VHSLIVKTGFEGYKFVNN------------ALIDMYAKQGNL-DCAFMVFNLMQDKDVIS 404
            H  +V  G   Y+ + N             ++D+  + G L D    + +     D + 
Sbjct: 527 -HGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVV 585

Query: 405 WTSLITGCAYHGSYEE 420
           W SL+  C  HG  E 
Sbjct: 586 WRSLLASCRIHGDMER 601



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 121/255 (47%), Gaps = 3/255 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           GQ+ +     D +  + +I  Y++SG + +  + F   P ++  TW+S+I G     L  
Sbjct: 337 GQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFE 396

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           +A  LF +    G +P  +T+ +V+  C+   + + GEQ    AIK  F+    +    +
Sbjct: 397 KALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFI 456

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
            M A+   +      F+   + ++ V+W+ +I+ ++Q+G    A+  F +M    V  N+
Sbjct: 457 HMCARSGDVDAVTRRFQEM-ESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNE 515

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLE 294
            TF ++LTAC+     D G + +  + +  G    +   + ++D+  + G L  A   + 
Sbjct: 516 VTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIR 575

Query: 295 YSEI-DNEVSWNSMI 308
            S   D+ V W S++
Sbjct: 576 DSAFHDDAVVWRSLL 590



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 74/170 (43%), Gaps = 34/170 (20%)

Query: 47  SNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIY 106
           + SG++D   + F++M  RD  +W+ +I+++A  G  R+A ++FNE              
Sbjct: 460 ARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNE-------------- 505

Query: 107 GYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDL 166
                            M      P++ T  NVL  CS  GL+  G +++   +K  + L
Sbjct: 506 -----------------MMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEI-MKNEYGL 547

Query: 167 NAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
           +  +  VT +VD+  +   + +AE   +      + V W +++     +G
Sbjct: 548 SPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHG 597



 Score = 42.4 bits (98), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 8/175 (4%)

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK--CGCINDANRVFDSMHT 500
           +L +C   T L     VHA   ++   +SL + NSL+  Y +   G    A R+ D M  
Sbjct: 8   LLRSC---TALPHVAAVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMPR 64

Query: 501 RDVITWTALIMGCAQNGKGKEALQ-FYDQMLARGTKPDYITFVGLLFACSHAGLAENARW 559
           R+ +++  LI   ++ G    AL+ F     A G + D  T+   L ACS A L      
Sbjct: 65  RNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRA-LDLRTGK 123

Query: 560 YFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
              +M  + G+  G      +  +    G++ EA+ + D    E D   W +LLS
Sbjct: 124 AVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDA-AEEHDDVSWNSLLS 177


>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
 gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
          Length = 880

 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 277/760 (36%), Positives = 434/760 (57%), Gaps = 20/760 (2%)

Query: 56  GQLFEKMSDRDGFTWNTMIAA-----YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSN 110
           G  F+ +  + GF  N ++ +     Y+  G  +EA ++F      +  +W+ ++  +  
Sbjct: 135 GTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVE 194

Query: 111 YGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV 170
            G   +A +L+ +M   G  P+++T   +L   S  GL   G+  H + +    +LN  +
Sbjct: 195 AGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLGL-NYGKLVHAHLMMWRIELNLVL 253

Query: 171 VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG 230
            T LVDMY KC+ I +A  + K+  +  +   WT +I+G++Q+    +AI  F +M   G
Sbjct: 254 KTALVDMYCKCQSIEDAVKVSKLTLE-YDVFLWTAIISGFTQSLKFREAITAFHEMETSG 312

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDL-DSA 289
           V  N FT+  IL AC+++ A D G Q+H  ++ +G E +V V ++L+DMY KC ++ + A
Sbjct: 313 VVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDA 372

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
            R        N +SW S+I GF+  G  +E++ +F  M    ++ + FT  ++L    + 
Sbjct: 373 VRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTI 432

Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
             L   + +H  I+K   +    V NAL+D YA  G +D A+ V ++M+ +DVI++TSL 
Sbjct: 433 KSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLA 492

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
           T     G++E AL   + M    +  D   ++S LSA A + ++E G+Q+H   +KSG  
Sbjct: 493 TRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGLG 552

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
           S +SV N LV +Y KCGCI+DA+R F  +   D ++W  LI G A NG    AL  ++ M
Sbjct: 553 SWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSSALSAFEDM 612

Query: 530 LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGK 589
              G +PD IT + +L+ACSH GL +    YF+SM + +GI+P  DHY C++DLLGR+G+
Sbjct: 613 RLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYVCLVDLLGRAGR 672

Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNM 649
           L EA  +++ M  +PDA ++K LL AC++HG++ LGE  A    EL+P +   YV L+N+
Sbjct: 673 LEEAMNVIETMPFKPDALIYKTLLGACKLHGNIPLGEHMARQGLELDPSDPAFYVLLANL 732

Query: 650 YSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEI 709
           Y  +G+ E   + R++M+ RG+RK PG SW+E  + VH+F + D  HP    I+ KI+ +
Sbjct: 733 YDDSGRSELGEKTRRMMRERGVRKNPGQSWMEERNMVHLFTAGDTSHPQIGKIHEKIESL 792

Query: 710 MLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVC 769
           +   +  G     N A            LA+HSEKLAVAFGL++ P  APIRI KN+R+C
Sbjct: 793 IAQFRNQGIWYQENRA------------LAHHSEKLAVAFGLISTPPKAPIRIIKNIRIC 840

Query: 770 GDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            DCH  +  ++ +  R II+RD NRFH FK G CSC  YW
Sbjct: 841 RDCHDFIMNVTRLVDREIIVRDGNRFHSFKKGECSCRGYW 880



 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 176/585 (30%), Positives = 298/585 (50%), Gaps = 19/585 (3%)

Query: 39  LNRALVDFSNSGEIDEA----GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP 94
           L + +V F NS  + +       + +     D F  N +++ Y     + EA++LF+E P
Sbjct: 18  LLKDIVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMP 77

Query: 95  FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ 154
            ++  +W+ L+  Y   G   EA ELF  M + G  P+++TL   LR CS       G +
Sbjct: 78  CRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTR 137

Query: 155 FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
           F     K+ FD N  + + L+D Y+KC C  EA  +F+   +G + V+WT M++ + + G
Sbjct: 138 FQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNG-DIVSWTMMVSSFVEAG 196

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQS 274
              +A++ +  M   GV  N+FTF  +L A + +   ++G  VH  ++    E N+ +++
Sbjct: 197 SWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFL-GLNYGKLVHAHLMMWRIELNLVLKT 255

Query: 275 ALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKI 334
           AL+DMY KC  ++ A ++ + +   +   W ++I GF +    +EA++ F +M    +  
Sbjct: 256 ALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVP 315

Query: 335 DDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL-DCAFMV 393
           ++FTY  +LN  +S + L+  K +HS +V  G E    V N+L+DMY K  N+ + A   
Sbjct: 316 NNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRA 375

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           F  +   +VISWTSLI G + HG  EE++K F  M+  G+ P+   +S+IL AC  +  L
Sbjct: 376 FRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSL 435

Query: 454 EFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC 513
              +++H   +K+   + + V N+LV  YA  G ++DA  V   M  RDVIT+T+L    
Sbjct: 436 TQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRI 495

Query: 514 AQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPG 573
            Q G  + AL     M     + D  +    L A +   + E  +         Y +K G
Sbjct: 496 NQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQL-----HCYSVKSG 550

Query: 574 PDHYAC----MIDLLGRSGKLIEA-KALLDQMVGEPDATVWKALL 613
              +      ++DL G+ G + +A ++ L+  + EPDA  W  L+
Sbjct: 551 LGSWISVSNGLVDLYGKCGCIHDAHRSFLE--ITEPDAVSWNGLI 593



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 208/426 (48%), Gaps = 7/426 (1%)

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           I++ C + S RD G  +H  I+  GF+ ++++ + L+ +Y KC  +  AR+L +     +
Sbjct: 22  IVSFCNSRSVRD-GICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRD 80

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
             SW  ++  + + G H+EAL LF  M       ++FT  + L   ++  + N+     +
Sbjct: 81  VASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQA 140

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
           L+ K+GF+    + +ALID Y+K G    A+ VF  M + D++SWT +++     GS+ +
Sbjct: 141 LVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQ 200

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
           AL+ +  M  +G+ P+      +L+A + L  L +G+ VHA  +      +L +  +LV 
Sbjct: 201 ALQLYHRMIQTGVAPNEFTFVKLLAASSFLG-LNYGKLVHAHLMMWRIELNLVLKTALVD 259

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           +Y KC  I DA +V       DV  WTA+I G  Q+ K +EA+  + +M   G  P+  T
Sbjct: 260 MYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFT 319

Query: 541 FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
           + G+L ACS   LA +      S   + G++        ++D+  +   +IE      + 
Sbjct: 320 YSGILNACSSI-LALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRG 378

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP-YVQLSNMYSTAGKWEDA 659
           +  P+   W +L++    HG   L E +      ++ +   P    LS +    G  +  
Sbjct: 379 IASPNVISWTSLIAGFSEHG---LEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSL 435

Query: 660 ARVRKL 665
            + RKL
Sbjct: 436 TQTRKL 441


>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Glycine max]
          Length = 975

 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 279/748 (37%), Positives = 420/748 (56%), Gaps = 5/748 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N +IA Y   G +  A K+F     +N  +W+S++Y  S  G   E   +F ++ 
Sbjct: 229 DAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLL 288

Query: 126 L---EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           +   EG  P   T+  V+  C+  G ++ G   HG A K        V   LVDMY+KC 
Sbjct: 289 ISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCG 348

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSI 241
            + EA  LF M   GKN V+W T+I GYS+ G      E  ++M R E V  N+ T  ++
Sbjct: 349 YLGEARALFDM-NGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNV 407

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           L AC+         ++HG     GF  +  V +A +  YAKC  LD A R+    E    
Sbjct: 408 LPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTV 467

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
            SWN++I   A+ GF  ++L LF  M    +  D FT  S+L   A    L   K +H  
Sbjct: 468 SSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGF 527

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           +++ G E  +F+  +L+ +Y +  ++    ++F+ M++K ++ W  +ITG + +    EA
Sbjct: 528 MLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEA 587

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           L  F  M   GI P  + V+ +L AC++++ L  G++VH+  LK+       V  +L+ +
Sbjct: 588 LDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDM 647

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           YAKCGC+  +  +FD ++ +D   W  +I G   +G G +A++ ++ M  +G +PD  TF
Sbjct: 648 YAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTF 707

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
           +G+L AC+HAGL      Y   M  +YG+KP  +HYAC++D+LGR+G+L EA  L+++M 
Sbjct: 708 LGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMP 767

Query: 602 GEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
            EPD+ +W +LLS+CR +GDLE+GE  +  L ELEP  A  YV LSN+Y+  GKW++  +
Sbjct: 768 DEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRK 827

Query: 662 VRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPD 721
           VR+ MK  G+ K+ GCSW+E    V+ F+  D        I     ++   I + GY PD
Sbjct: 828 VRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQTWIKLEKKISKIGYKPD 887

Query: 722 MNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISA 781
            +  LH +EEEGK   L  HSEKLA++FGLL   +G  +R+ KNLR+C DCH A+K +S 
Sbjct: 888 TSCVLHELEEEGKIKILKSHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSK 947

Query: 782 VYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           V  R II+RD+ RFHHFK G C+CGD+W
Sbjct: 948 VVKRDIIVRDNKRFHHFKNGLCTCGDFW 975



 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 170/568 (29%), Positives = 285/568 (50%), Gaps = 12/568 (2%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRP 131
           +IA Y+  G   +++ +F+    K+ F +++L+ GYS   L  +A  LF ++       P
Sbjct: 134 IIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAP 193

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
             +TL  V + C+    ++ GE  H  A+K     +AFV   L+ MY KC  +  A  +F
Sbjct: 194 DNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVF 253

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV---EGVESNQFTFPSILTACAAV 248
           +   + +N V+W +++   S+NG   +    F+ + +   EG+  +  T  +++ ACAAV
Sbjct: 254 ETMRN-RNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAV 312

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
                G  VHG     G    V V ++L+DMY+KCG L  AR L + +   N VSWN++I
Sbjct: 313 GEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTII 372

Query: 309 VGFARQGFHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
            G++++G  +    L ++M   + +++++ T  +VL   +    L + K +H    + GF
Sbjct: 373 WGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGF 432

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
              + V NA +  YAK  +LDCA  VF  M+ K V SW +LI   A +G   ++L  F  
Sbjct: 433 LKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLV 492

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           M  SG+ PD   + S+L ACA L  L  G+++H   L++G      +  SL+ +Y +C  
Sbjct: 493 MMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSS 552

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           +     +FD M  + ++ W  +I G +QN    EAL  + QML+ G KP  I   G+L A
Sbjct: 553 MLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGA 612

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
           CS        +       K + +         +ID+  + G + +++ + D+ V E D  
Sbjct: 613 CSQVSALRLGKEVHSFALKAH-LSEDAFVTCALIDMYAKCGCMEQSQNIFDR-VNEKDEA 670

Query: 608 VWKALLSACRVHGDLELGERAANNLFEL 635
           VW  +++   +HG    G +A   LFEL
Sbjct: 671 VWNVIIAGYGIHGH---GLKAI-ELFEL 694



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 205/424 (48%), Gaps = 7/424 (1%)

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV-TGLVDMYAKCKCIFEAEYL 190
           S+  +  +LR C     +  G + H     +    N  V+ T ++ MY+ C    ++  +
Sbjct: 91  SKEAIGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGV 150

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILTACAAVS 249
           F    + K+   +  +++GYS+N     AI  F ++     +  + FT P +  ACA V+
Sbjct: 151 FDAAKE-KDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVA 209

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
             + G  VH   L +G  ++ +V +ALI MY KCG ++SA ++ E     N VSWNS++ 
Sbjct: 210 DVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMY 269

Query: 310 GFARQGFHKEALSLFKKM---HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
             +  G   E   +FK++       +  D  T  +V+   A+  ++     VH L  K G
Sbjct: 270 ACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLG 329

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
                 VNN+L+DMY+K G L  A  +F++   K+V+SW ++I G +  G +    +   
Sbjct: 330 ITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQ 389

Query: 427 DM-RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
           +M R   +  + V V ++L AC+    L   +++H    + G      V N+ V  YAKC
Sbjct: 390 EMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKC 449

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
             ++ A RVF  M  + V +W ALI   AQNG   ++L  +  M+  G  PD  T   LL
Sbjct: 450 SSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLL 509

Query: 546 FACS 549
            AC+
Sbjct: 510 LACA 513



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 181/361 (50%), Gaps = 11/361 (3%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           +D    N  +AAYA    L  A+++F     K   +W++LI  ++  G   ++ +LF  M
Sbjct: 434 KDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVM 493

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
              G  P ++T+ ++L  C+    L+ G++ HG+ ++   +L+ F+   L+ +Y +C  +
Sbjct: 494 MDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSM 553

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
              + +F    + K+ V W  MITG+SQN    +A++ FR M   G++  +     +L A
Sbjct: 554 LLGKLIFDKM-ENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGA 612

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C+ VSA   G +VH   L +    + +V  ALIDMYAKCG ++ ++ + +     +E  W
Sbjct: 613 CSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVW 672

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLI- 362
           N +I G+   G   +A+ LF+ M  +  + D FT+  VL  C  + +     K +  +  
Sbjct: 673 NVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQN 732

Query: 363 ---VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGSY 418
              VK   E Y  V    +DM  + G L  A  + N M D+ D   W+SL++ C  +G  
Sbjct: 733 LYGVKPKLEHYACV----VDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDL 788

Query: 419 E 419
           E
Sbjct: 789 E 789



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 151/309 (48%), Gaps = 23/309 (7%)

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNA-----LIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
           +++  + VH+L+  +    +K  N+      +I MY+  G+   +  VF+  ++KD+  +
Sbjct: 107 NIHVGRKVHALVSAS----HKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLY 162

Query: 406 TSLITGCAYHGSYEEALKYFSDM-RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
            +L++G + +  + +A+  F ++   + + PD+  +  +  ACA +  +E G+ VHA+ L
Sbjct: 163 NALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALAL 222

Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ 524
           K+GG S   V N+L+ +Y KCG +  A +VF++M  R++++W +++  C++NG   E   
Sbjct: 223 KAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCG 282

Query: 525 FYDQML---ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMI 581
            + ++L     G  PD  T V ++ AC+  G           +    GI         ++
Sbjct: 283 VFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMG-MVVHGLAFKLGITEEVTVNNSLV 341

Query: 582 DLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDL--------ELGERAANNLF 633
           D+  + G L EA+AL D M G  +   W  ++      GD         E+       + 
Sbjct: 342 DMYSKCGYLGEARALFD-MNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVN 400

Query: 634 ELEPMNAMP 642
           E+  +N +P
Sbjct: 401 EVTVLNVLP 409



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 117/253 (46%), Gaps = 34/253 (13%)

Query: 58  LFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEA 117
           +F+KM ++    WN MI  ++            NE P                     EA
Sbjct: 559 IFDKMENKSLVCWNVMITGFSQ-----------NELP--------------------CEA 587

Query: 118 FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
            + F QM   G +P +  +  VL  CS    L+ G++ H +A+K     +AFV   L+DM
Sbjct: 588 LDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDM 647

Query: 178 YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
           YAKC C+ +++ +F    + K+   W  +I GY  +G+G KAIE F  M+ +G   + FT
Sbjct: 648 YAKCGCMEQSQNIFDRVNE-KDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFT 706

Query: 238 FPSILTACAAVSARDFGAQVHGCILS-SGFEANVYVQSALIDMYAKCGDLDSARRLL-EY 295
           F  +L AC        G +  G + +  G +  +   + ++DM  + G L  A +L+ E 
Sbjct: 707 FLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEM 766

Query: 296 SEIDNEVSWNSMI 308
            +  +   W+S++
Sbjct: 767 PDEPDSGIWSSLL 779



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 41/173 (23%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           AL+D ++  G ++++  +F++++++D   WN +IA                         
Sbjct: 643 ALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIA------------------------- 677

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG--- 157
                 GY  +G  ++A ELF  MQ +G RP  +T   VL  C+  GL+  G ++ G   
Sbjct: 678 ------GYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQ 731

Query: 158 --YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
             Y +K   +  A V    VDM  +   + EA  L    PD  +   W+++++
Sbjct: 732 NLYGVKPKLEHYACV----VDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLS 780


>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Brachypodium distachyon]
          Length = 796

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 277/754 (36%), Positives = 435/754 (57%), Gaps = 15/754 (1%)

Query: 68  FTWNTMIAAYAN--SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           F  NT++AAY    +G   +A++L +E P +N  +++ LI  YS  G   E+ E F    
Sbjct: 46  FLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSFNLLIDAYSRAGQTEESLETFLHAH 105

Query: 126 LEG-YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
                +  ++T    L  CS  G L+ G+  H  A+        FV   LV MYA+C  +
Sbjct: 106 RAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDM 165

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            EA  +F +  + ++ V+W ++++GY + G   + +  F  MR   +  N F   S++  
Sbjct: 166 GEARRVFDVTEE-RDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKC 224

Query: 245 CAAV--SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           C+    S R     VHGC++ +G + ++++ SA++DMYAK G L  A  L +     N V
Sbjct: 225 CSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVV 284

Query: 303 SWNSMIVGFARQ--GFHKE----ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
            +N+MI G  R     HKE    ALSL+ ++ +R ++  +FT+ SV+       D+   K
Sbjct: 285 VFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGK 344

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H  ++K  F+G  F+ +ALID+Y     ++  F  F  +  +DV++WT++I+GC  + 
Sbjct: 345 QIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNE 404

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
            +E AL  F ++   G+ PD   +SS+++ACA L V+  G+Q+     KSG     ++ N
Sbjct: 405 LFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGN 464

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           S + +YA+ G +  A + F  M + DV++W+A+I   AQ+G  ++ALQF+++M+     P
Sbjct: 465 SCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVP 524

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           + ITF+G+L ACSH GL +    Y+E M   YG+ P   H  C++DLLGR+G+L +A+A 
Sbjct: 525 NEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAF 584

Query: 597 LDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
           +   +   +  VW++LL +CR+H D+E G+  A+ + EL+P ++  YV L NMY  AG+ 
Sbjct: 585 IRDSIFHDEPVVWQSLLGSCRIHRDMERGQLVADRIMELQPASSGCYVNLYNMYLDAGEL 644

Query: 657 EDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA 716
              +++R LMK RG++KEPG SW+E  S +H F++ D+ HP    IY+K+ E++  I + 
Sbjct: 645 SLGSKIRDLMKERGVKKEPGLSWIELRSGIHSFVAGDKSHPECNAIYTKLAEMLSKIDK- 703

Query: 717 GYVPDMNFALHNVEEEGKEIG-LAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
                    +  VE  G+E   +  HSEKLAVA G++ LPQ APIR+ KNLRVC DCH+ 
Sbjct: 704 -LTTTDTSCIEWVETTGREQNWMNCHSEKLAVALGIIHLPQSAPIRVMKNLRVCRDCHST 762

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           MK IS    R IILRD  RFHHF+ G+CSCGDYW
Sbjct: 763 MKLISKSECREIILRDVIRFHHFRDGSCSCGDYW 796



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 140/532 (26%), Positives = 258/532 (48%), Gaps = 55/532 (10%)

Query: 34  KPASDLNRALVDFSNSGEIDEAGQLF-------EKMSDRDGFTWNTMIAAYANSGRLR-- 84
           + A   N  +  +S +G+ +E+ + F       E  +DR  FT+   +AA + +GRL+  
Sbjct: 76  RNAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADR--FTYAAALAACSRAGRLKEG 133

Query: 85  ---------------------------------EAKKLFNETPFKNFFTWSSLIYGYSNY 111
                                            EA+++F+ T  ++  +W+SL+ GY   
Sbjct: 134 KVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRV 193

Query: 112 GLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG--EQFHGYAIKTCFDLNAF 169
           G   E   +F  M+      + + L +V++ CS      RG  E  HG  +K   D + F
Sbjct: 194 GAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLF 253

Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF------KAIECF 223
           + + +VDMYAK   + EA  LFK   D  N V +  MI G  ++          +A+  +
Sbjct: 254 LASAMVDMYAKRGALSEAVALFKSVLD-PNVVVFNAMIAGLCRDEAAVHKEVVREALSLY 312

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
            +++  G+E  +FTF S++ AC      +FG Q+HG +L   F+ + ++ SALID+Y   
Sbjct: 313 SELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNS 372

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
             ++   R        + V+W +MI G  +    + AL+LF ++    +K D FT  SV+
Sbjct: 373 ACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVM 432

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVI 403
           N  AS   +   + +     K+GF+ +  + N+ I MYA+ GN++ A   F  M+  DV+
Sbjct: 433 NACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVV 492

Query: 404 SWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVF 463
           SW+++I+  A HG   +AL++F++M  + + P+ +    +L+AC+   +++ G + + + 
Sbjct: 493 SWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIM 552

Query: 464 -LKSGGCSSLSVDNSLVLVYAKCGCINDANR-VFDSMHTRDVITWTALIMGC 513
            ++ G C ++     +V +  + G + DA   + DS+   + + W +L+  C
Sbjct: 553 KMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSC 604



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 182/376 (48%), Gaps = 33/376 (8%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI------EA 117
           D D F  + M+  YA  G L EA  LF      N   ++++I G       +      EA
Sbjct: 249 DTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREA 308

Query: 118 FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
             L+ ++Q  G  P+++T  +V+R C+L G ++ G+Q HG  +K CF  + F+ + L+D+
Sbjct: 309 LSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDL 368

Query: 178 YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
           Y    C+ +    F+  P  ++ V WT MI+G  QN    +A+  F ++   G++ + FT
Sbjct: 369 YFNSACMEDGFRCFRSVPK-QDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFT 427

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
             S++ ACA+++    G Q+      SGF+    + ++ I MYA+ G++++A +  +  E
Sbjct: 428 ISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEME 487

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
             + VSW+++I   A+ G  ++AL  F +M    +  ++ T+  VL   +          
Sbjct: 488 SHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACS---------- 537

Query: 358 VHSLIVKTGFEGYKFVN------------NALIDMYAKQGNL-DC-AFMVFNLMQDKDVI 403
            H  +V  G   Y+ +               ++D+  + G L D  AF+  ++  D+ V+
Sbjct: 538 -HGGLVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVV 596

Query: 404 SWTSLITGCAYHGSYE 419
            W SL+  C  H   E
Sbjct: 597 -WQSLLGSCRIHRDME 611


>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 276/746 (36%), Positives = 435/746 (58%), Gaps = 5/746 (0%)

Query: 67  GFTWNTMIAAYANSGRLREAKKLFNETPFK-NFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           GF  N +++ YA +  L  A++LF+    K +   W+S++  YS  G  +E  ELF +M 
Sbjct: 217 GFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMH 276

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT-CFDLNAFVVTGLVDMYAKCKCI 184
           + G  P+ YT+ + L  C      + G++ H   +K+       +V   L+ MY +C  +
Sbjct: 277 MTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKM 336

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            +AE + +   +  + V W ++I GY QN    +A+E F DM   G +S++ +  SI+ A
Sbjct: 337 PQAERILRQM-NNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
              +S    G ++H  ++  G+++N+ V + LIDMY+KC       R        + +SW
Sbjct: 396 SGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISW 455

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
            ++I G+A+   H EAL LF+ +  + ++ID+    S+L   +    +   K +H  I++
Sbjct: 456 TTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILR 515

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            G      + N L+D+Y K  N+  A  VF  ++ KDV+SWTS+I+  A +G+  EA++ 
Sbjct: 516 KGLLD-TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVEL 574

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           F  M  +G+  D V +  ILSA A L+ L  G+++H   L+ G C   S+  ++V +YA 
Sbjct: 575 FRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYAC 634

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG +  A  VFD +  + ++ +T++I     +G GK A++ +D+M      PD+I+F+ L
Sbjct: 635 CGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLAL 694

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L+ACSHAGL +  R + + M+  Y ++P P+HY C++D+LGR+  ++EA   +  M  EP
Sbjct: 695 LYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEP 754

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
            A VW ALL+ACR H + E+GE AA  L ELEP N    V +SN+++  G+W D  +VR 
Sbjct: 755 TAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRA 814

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIML-LIKEAGYVPDMN 723
            MK+ G+ K PGCSW+E + +VH F + D+ HP   +IY K+ E+   L +E GYV D  
Sbjct: 815 KMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTK 874

Query: 724 FALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVY 783
           F LHNV+E  K   L  HSE++A+A+GLL  P  A +RI KNLRVC DCHT  K +S ++
Sbjct: 875 FVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLF 934

Query: 784 LRHIILRDSNRFHHFKAGNCSCGDYW 809
            R I++RD+NRFHHF++G CSCGD W
Sbjct: 935 RRDIVMRDANRFHHFESGLCSCGDSW 960



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 143/415 (34%), Positives = 225/415 (54%), Gaps = 6/415 (1%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKT--CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD 196
           VL LC  +  + +G Q H    KT   F+L+ F+   LV MY KC  + +AE +F   PD
Sbjct: 86  VLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPD 144

Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
            +   AW TMI  Y  NG    A+  + +MRVEGV     +FP++L ACA +     G++
Sbjct: 145 -RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSE 203

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE-YSEIDNEVSWNSMIVGFARQG 315
           +H  ++  G+ +  ++ +AL+ MYAK  DL +ARRL + + E  + V WNS++  ++  G
Sbjct: 204 LHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSG 263

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK-FVN 374
              E L LF++MH      + +T  S L            K +H+ ++K+     + +V 
Sbjct: 264 KSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVC 323

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           NALI MY + G +  A  +   M + DV++W SLI G   +  Y+EAL++FSDM  +G  
Sbjct: 324 NALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHK 383

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
            D V ++SI++A   L+ L  G ++HA  +K G  S+L V N+L+ +Y+KC       R 
Sbjct: 384 SDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRA 443

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
           F  MH +D+I+WT +I G AQN    EAL+ +  +  +  + D +    +L A S
Sbjct: 444 FLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 146/545 (26%), Positives = 252/545 (46%), Gaps = 19/545 (3%)

Query: 19  IIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYA 78
           + GPA  ++ + +++      +     ++  G+   A  L       + +  N +IA Y 
Sbjct: 277 MTGPAPNSYTIVSALTACDGFS-----YAKLGKEIHASVLKSSTHSSELYVCNALIAMYT 331

Query: 79  NSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDN 138
             G++ +A+++  +    +  TW+SLI GY    +  EA E F  M   G++  + ++ +
Sbjct: 332 RCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTS 391

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           ++        L  G + H Y IK  +D N  V   L+DMY+KC         F    D K
Sbjct: 392 IIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD-K 450

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           + ++WTT+I GY+QN    +A+E FRD+  + +E ++    SIL A + + +     ++H
Sbjct: 451 DLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIH 510

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
             IL  G    V +Q+ L+D+Y KC ++  A R+ E  +  + VSW SMI   A  G   
Sbjct: 511 CHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNES 569

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           EA+ LF++M    +  D      +L+  AS   LN  + +H  +++ GF     +  A++
Sbjct: 570 EAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVV 629

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
           DMYA  G+L  A  VF+ ++ K ++ +TS+I     HG  + A++ F  MR   + PDH+
Sbjct: 630 DMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHI 689

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN-SLVLVYAKCGCINDANRVFDS 497
              ++L AC+   +L+ G+    +                LV +  +  C+ +A      
Sbjct: 690 SFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKM 749

Query: 498 MHTRDVI-TWTALIMGCAQNGKGKEALQFYDQML--ARGTKPDYITFVGLLFACSHAGLA 554
           M T      W AL+  C  + + KE  +   Q L       P  +  V  +F       A
Sbjct: 750 MKTEPTAEVWCALLAACRSHSE-KEIGEIAAQRLLELEPKNPGNLVLVSNVF-------A 801

Query: 555 ENARW 559
           E  RW
Sbjct: 802 EQGRW 806


>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 301/812 (37%), Positives = 454/812 (55%), Gaps = 34/812 (4%)

Query: 29  VGNSVKPASDLNRALVDFS-NSGEIDEAGQLFEKMSDRDGFTWNTMIAA-----YANSGR 82
           +G  ++P      +L+  S ++GEI    QL    S R GF  ++ I A     Y+  G 
Sbjct: 113 MGEGLQPNGFSLASLLKVSCSTGEIGLCRQL-HGWSIRTGFGLDSGIRAAWITMYSRCGV 171

Query: 83  LREAKKLFNETPFK--NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGY-RPSQYTLDNV 139
           L +A+++F+ET     +   W+S+I  Y  +G  +E   LF +M   G   P++ T  +V
Sbjct: 172 LEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASV 231

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKN 199
           +  C   G  + G   HG  IK   +    +   LV  Y KC  +  A  LF+     K+
Sbjct: 232 VNACGSSGEEKYGAMVHGRIIKAGLEATN-LWNSLVTFYGKCGNLQHASQLFERISR-KD 289

Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDM-RVEG-VESNQFTFPSILTACAAVSARDFGAQV 257
            V+W  MI    Q G G  A+  FR M +VE  V+ N+ TF S+L+A + +SA   G ++
Sbjct: 290 VVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREI 349

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           H  I     E +  + ++LI  Y+KC ++  AR + E   + + +SWNSM+ G+ +    
Sbjct: 350 HAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQ 409

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASN----IDLNNAKSVHSLIVKTGFEG--YK 371
                +FK+M    I+ D  +   + N  + +    I     K +H  I++    G    
Sbjct: 410 GRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSL 469

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
            V+NA++ MYAK   +  A  +F  M+++D  SW +++ G + +  +E+ L  F D+   
Sbjct: 470 SVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQ 529

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLK---SGGC----SSLSVDNSLVLVYAK 484
           G   DHV +S +L++C  L  L+ G+Q HAV  K      C    S LS++N+L+ +Y+K
Sbjct: 530 GFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSK 589

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG I DA +VF  M  +DV +WTA+I GCA +G   EALQ +++M   G KP+ +TF+ L
Sbjct: 590 CGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLAL 649

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLD------ 598
           L AC+H GL +   +YF+SM   YG+ P  +HYACMIDL GRSG+   AK+L++      
Sbjct: 650 LMACAHGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLF 709

Query: 599 QMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWED 658
           +   +    +WK LL AC     L+LG  AA  + ELEP +   Y+ L+N+Y+++G WED
Sbjct: 710 KPYHDDILNLWKVLLGACHASKQLDLGVEAATKILELEPEDEATYILLANLYASSGLWED 769

Query: 659 AARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGY 718
           A +VRK M+ +G+RKE GCSW++T ++ H+F++ D  HP R +IY K+ ++    +  GY
Sbjct: 770 AIKVRKAMRDKGLRKEVGCSWIDTGNRRHVFVAGDVYHPQRKEIYEKLAQLNYSCRRMGY 829

Query: 719 VPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQG-APIRIFKNLRVCGDCHTAMK 777
           VP     LH+V+E  KE  L  HSEKLAV+FGLL    G   IR+ KNLRVC DCH+ MK
Sbjct: 830 VPMTELVLHDVDETEKEAILGCHSEKLAVSFGLLNCGVGNGVIRVMKNLRVCEDCHSWMK 889

Query: 778 YISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           + S +  R I+LRDS RFH F+ G+CSCGDYW
Sbjct: 890 FASLLEKREILLRDSQRFHLFRDGSCSCGDYW 921



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 157/570 (27%), Positives = 290/570 (50%), Gaps = 30/570 (5%)

Query: 82  RLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLR 141
           RL+ A++LF+  P ++  +WS+LI  YS  G   +AF LF +M  EG +P+ ++L ++L+
Sbjct: 70  RLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLK 129

Query: 142 LCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHV 201
           +    G +    Q HG++I+T F L++ +    + MY++C  + +A+ +F    D  + +
Sbjct: 130 VSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVF----DETSLL 185

Query: 202 A-----WTTMITGYSQNGYGFKAIECFRDMRVEGVES-NQFTFPSILTACAAVSARDFGA 255
           A     W ++I  Y  +G   + +  F  M   GV +  + T+ S++ AC +     +GA
Sbjct: 186 ALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGA 245

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
            VHG I+ +G EA   + ++L+  Y KCG+L  A +L E     + VSWN+MI    ++G
Sbjct: 246 MVHGRIIKAGLEAT-NLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRG 304

Query: 316 FHKEALSLFKKMHARD--IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
             + AL LF++M   +  ++ +  T+ S+L+  +    L   + +H+ I +   E    +
Sbjct: 305 EGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSI 364

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
            N+LI  Y+K   +  A  +F  +  +D+ISW S++ G   +         F  M +SGI
Sbjct: 365 TNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGI 424

Query: 434 CPDHVVVSSILSACAE----LTVLEFGQQVHAVFLK--SGGCSSLSVDNSLVLVYAKCGC 487
            PD   ++ I +A +     L     G+++H   L+  + G  SLSV N+++ +YAK   
Sbjct: 425 EPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNR 484

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           I DA ++F  M  RD  +W A++ G ++N K ++ L  +  +L +G   D+++   LL +
Sbjct: 485 IADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTS 544

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYA------CMIDLLGRSGKLIEAKALLDQMV 601
           C      +  + +   + K++  +  P   +       +I +  + G + +A  +  +M 
Sbjct: 545 CGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKM- 603

Query: 602 GEPDATVWKALLSACRVHG----DLELGER 627
              D   W A+++ C  HG     L+L ER
Sbjct: 604 ERKDVFSWTAMITGCAHHGLAVEALQLFER 633


>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
          Length = 1866

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 275/655 (41%), Positives = 395/655 (60%), Gaps = 9/655 (1%)

Query: 142 LCSLKGLL------QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
           L SL  LL      +   Q H   I T      F+   L+++YAKC  + +   LF   P
Sbjct: 30  LTSLNSLLNCSRTSKHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAP 89

Query: 196 D-GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
           D  KN V+WT++IT  ++    FKA+  F  MR  GV  N +TF ++L+AC   +A   G
Sbjct: 90  DDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHG 149

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
            Q+H  +   GF A V+V SAL+DMYAKC D+  A ++ E   + N VSWN+MIVGF + 
Sbjct: 150 EQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQN 209

Query: 315 GFHKEALSLFKKMHARDIK-IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
             + +A+  FK +   ++  +D+ ++ SV +  A+  +L   K VH + +K G     ++
Sbjct: 210 KLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYI 269

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
           NN+L DMY K G  +    +F+    +DV++W  +I    Y+ +YE+A   F  MR  G 
Sbjct: 270 NNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGS 329

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
            PD    SS+L +CA L  L  G  +H   ++SG   +L V +SL+ +YAKCG + DA +
Sbjct: 330 IPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQ 389

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGL 553
           +F+    R+V+ WTA+I  C Q+G     ++ ++QML  G KPDYITFV +L ACSH G 
Sbjct: 390 IFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGR 449

Query: 554 AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
            E   +YF SM KV+GI PG +HYAC++DLL R+G+L  AK  ++ M  +PDA+VW ALL
Sbjct: 450 VEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALL 509

Query: 614 SACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRK 673
           SACR H +L +G+  A  LF+LEP N   YV L N+ +  G   +A  VR+ M+S G+RK
Sbjct: 510 SACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRK 569

Query: 674 EPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEG 733
           EPGCSW++  +  ++F   D+ H    +IY  ++++  L+K+ GYV +  FA+ N  EE 
Sbjct: 570 EPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEMLEKLKELVKKKGYVAETEFAI-NTAEEY 628

Query: 734 KEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHII 788
           KE  L YHSEK+A+AFGLL+LP GAPIRI KNLR CGDCHT MK+ S ++ R II
Sbjct: 629 KEQSLWYHSEKIALAFGLLSLPAGAPIRIKKNLRTCGDCHTVMKFASEIFAREII 683



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 161/524 (30%), Positives = 258/524 (49%), Gaps = 32/524 (6%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETP--FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           F +N ++  YA  G + +   LF+  P   KN  +W+SLI   + +    +A   F  M+
Sbjct: 63  FLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMR 122

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G  P+ YT   VL  C+       GEQ H    K  F    FVV+ LVDMYAKC  + 
Sbjct: 123 RSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDML 182

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES-NQFTFPSILTA 244
            AE +F+  P  +N V+W TMI G+ QN    +AI  F+ + +E + + ++ +F S+ +A
Sbjct: 183 MAEKVFEEMP-VRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSA 241

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           CA     +FG QVHG  L  G    VY+ ++L DMY KCG  +   +L   +   + V+W
Sbjct: 242 CANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTW 301

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N MI+ +     +++A + F  M  +    D+ +Y SVL+  A+   L     +H+ I++
Sbjct: 302 NIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIR 361

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
           +GF     V ++LI MYAK G+L  AF +F   +D++V+ WT++I  C  HG     ++ 
Sbjct: 362 SGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVEL 421

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFG-------QQVHAVFL--KSGGCSSLSVD 475
           F  M   GI PD++   S+LSAC+    +E G        +VH ++   +   C      
Sbjct: 422 FEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYAC------ 475

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGK---GKE-ALQFYDQML 530
             +V + ++ G ++ A R  + M  + D   W AL+  C  +     GKE AL+ +D  L
Sbjct: 476 --IVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFD--L 531

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
                 +Y+    +L        A+  R   ES+    G++  P
Sbjct: 532 EPDNPGNYVLLCNILTRNGMLNEADEVRRKMESI----GVRKEP 571



 Score = 40.0 bits (92), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 36/170 (21%), Positives = 66/170 (38%), Gaps = 42/170 (24%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++  G + +A Q+FE+  DR+   W  +IAA                             
Sbjct: 378 YAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQ-------------------------- 411

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
           +G++N+       ELF QM  EG +P   T  +VL  CS  G ++ G  +    IK    
Sbjct: 412 HGHANW-----VVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKV--- 463

Query: 166 LNAFVVTG------LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
               +  G      +VD+ ++   +  A+   ++ P   +   W  +++ 
Sbjct: 464 --HGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSA 511


>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
 gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
          Length = 782

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 281/783 (35%), Positives = 447/783 (57%), Gaps = 9/783 (1%)

Query: 34  KPASDLNRALVDFSNSGE-IDEAGQLFEKMSDRDGFTWNTM-----IAAYANSGRLREAK 87
           KP +    AL+   +S + +D   ++   + DR GF  N +     I  YA  G + EA+
Sbjct: 2   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDR-GFEQNNLVCGHLIQMYAQCGSVPEAQ 60

Query: 88  KLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKG 147
           ++F     K+ F W+ +I  Y   G    A  +F+QMQ E   P++ T   +L  C+   
Sbjct: 61  QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 120

Query: 148 LLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
            L+ G + HG  ++  F+ + FV T L++MY KC  +  A   FK   + ++ V+WT MI
Sbjct: 121 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRL-EHRDVVSWTAMI 179

Query: 208 TGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFE 267
               Q+     A   +R M+++GV  N+ T  ++  A         G  ++  + S   E
Sbjct: 180 AACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVME 239

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM 327
           ++V V ++ ++M+   G L  ARRL E     + V+WN +I  + +     EA+ LF ++
Sbjct: 240 SDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRL 299

Query: 328 HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL 387
               IK +D T+  +LN + S   L   K +H L+ + G++    V  AL+ +Y +    
Sbjct: 300 QQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAP 359

Query: 388 DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSAC 447
             A+ +F  M  KDVI+WT +    A +G  +EAL+ F +M++ G  P    + ++L  C
Sbjct: 360 GQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTC 419

Query: 448 AELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWT 507
           A L  L+ G+Q+H+  +++G    + V+ +L+ +Y KCG + +A  VF+ M  RD++ W 
Sbjct: 420 AHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWN 479

Query: 508 ALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKV 567
           +++   AQ+G   E LQ ++QM   G K D ++FV +L A SH+G   +   YF +M + 
Sbjct: 480 SMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQD 539

Query: 568 YGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG-EPDATVWKALLSACRVHGDLELGE 626
           + I P P+ Y C++DLLGR+G++ EA  ++ ++ G  PD  +W  LL ACR H   +  +
Sbjct: 540 FSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAK 599

Query: 627 RAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQV 686
            AA  + E +P ++  YV LSN+Y+ AG W+   R+RKLM+SRG++KEPG S +E  ++V
Sbjct: 600 AAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRV 659

Query: 687 HIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLA 746
           H F+  DR HP R  IY+++D +   ++ AGY+PD    LH+VE+E KE  L YHSE+LA
Sbjct: 660 HEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFYHSERLA 719

Query: 747 VAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCG 806
           +AFGL++ P G P+R+ KNLRVC DCHTA KYIS +  R I++RD++RFH+FK G CSC 
Sbjct: 720 IAFGLMSTPPGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFKDGRCSCK 779

Query: 807 DYW 809
           DYW
Sbjct: 780 DYW 782



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 152/532 (28%), Positives = 267/532 (50%), Gaps = 4/532 (0%)

Query: 129 YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
           ++P       +L+ CS    +  G + H +     F+ N  V   L+ MYA+C  + EA+
Sbjct: 1   FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
            +F++  + K+  AWT MI  Y Q G   +A+  F  M+ E V   + T+ +IL ACA+ 
Sbjct: 61  QVFEIL-ERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACAST 119

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
            +   G ++HG IL  GFE +V+V +ALI+MY KCG +  A    +  E  + VSW +MI
Sbjct: 120 ESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMI 179

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
               +      A  L+++M    +  +  T  +V N +     L+  K ++SL+     E
Sbjct: 180 AACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVME 239

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
               V N+ ++M+   G L  A  +F  M D+DV++W  +IT    + ++ EA++ F  +
Sbjct: 240 SDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRL 299

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
           +  GI  + +    +L+    LT L  G+ +H +  ++G    + V  +L+ +Y +C   
Sbjct: 300 QQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAP 359

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
             A ++F  M ++DVITWT + +  AQNG  KEALQ + +M   G +P   T V +L  C
Sbjct: 360 GQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTC 419

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           +H    +  R     + +  G +        +I++ G+ GK+ EA+++ ++M  + D  V
Sbjct: 420 AHLAALQKGRQIHSHIIE-NGFRMEMVVETALINMYGKCGKMAEARSVFEKM-AKRDILV 477

Query: 609 WKALLSACRVHGDLELGERAANNL-FELEPMNAMPYVQLSNMYSTAGKWEDA 659
           W ++L A   HG  +   +  N +  + E  +A+ +V + +  S +G   D 
Sbjct: 478 WNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDG 529



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 82/197 (41%), Gaps = 48/197 (24%)

Query: 21  GPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           G   ++H + N  +    +  AL++ +   G++ EA  +FEKM+ RD   WN+M+ AYA 
Sbjct: 428 GRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQ 487

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
            G   E  +LFN                               QMQL+G +    +  +V
Sbjct: 488 HGYYDETLQLFN-------------------------------QMQLDGEKADAVSFVSV 516

Query: 140 LRLCSLKGLLQRGEQF-----HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA-EYLFKM 193
           L   S  G +  G Q+       ++I    +L   V    VD+  +   I EA + + K+
Sbjct: 517 LSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCV----VDLLGRAGRIQEAVDIVLKL 572

Query: 194 ---FPDGKNHVAWTTMI 207
               PDG   + W T++
Sbjct: 573 SGCLPDG---ILWMTLL 586


>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 283/703 (40%), Positives = 414/703 (58%), Gaps = 34/703 (4%)

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP--DG 197
           L+L S    ++  +Q H + IKT      F ++ L++  A  +   +  Y   +F   + 
Sbjct: 33  LKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRS-GDISYAISLFNSIEE 91

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
            N   W +MI G S +     A+  F  M   GVE N +TFP +L +CA +++   G Q+
Sbjct: 92  PNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQI 151

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDL------------------------------- 286
           H  +L  GF ++V++ ++LI+MYA+ G++                               
Sbjct: 152 HAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYM 211

Query: 287 DSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCF 346
           D AR+L +   + + VSWN+MI G+A+ G  KEAL LF+ M   ++  ++ T  SVL+  
Sbjct: 212 DRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSAC 271

Query: 347 ASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWT 406
           A +  L+   S+ S I   G      + NALIDMY+K G+L  A  +F+ M ++DVISW 
Sbjct: 272 AQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWN 331

Query: 407 SLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
            +I G  +  SY+EAL  F +M  SG+ P  +   SIL +CA L  ++ G+ +HA   K+
Sbjct: 332 VMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKN 391

Query: 467 GGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFY 526
               S S+  SL+ +YAKCG I  A +VFD M  + + +W A+I G A +G+  +A + +
Sbjct: 392 FNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELF 451

Query: 527 DQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGR 586
            +M + G +P+ ITFVG+L AC HAGL +  + +F SM + Y I P   HY CMIDLLGR
Sbjct: 452 SKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGR 511

Query: 587 SGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQL 646
           +G   EA++LL  M  +PD  +W +LL ACR HG +ELGE  A  LFELEP N   YV L
Sbjct: 512 AGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLL 571

Query: 647 SNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKI 706
           SN+Y+ AGKW+D AR+R  +  RG++K PGC+ +E ++ VH F+  D+ HP   DIY  +
Sbjct: 572 SNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRML 631

Query: 707 DEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNL 766
           +E+   +K  G+V D +  L++++EE KE  L++HSEKLA+AFGL++   G PIRI KNL
Sbjct: 632 EEVDEQLKVFGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNL 691

Query: 767 RVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           RVC +CH+A K IS ++ R II RD NRFHHFK G+CSC DYW
Sbjct: 692 RVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 148/477 (31%), Positives = 235/477 (49%), Gaps = 34/477 (7%)

Query: 75  AAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQY 134
           +A + SG +  A  LFN     N F W+S+I G S       A   F +M   G  P+ Y
Sbjct: 71  SAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSY 130

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK------CKCIFE-- 186
           T   +L+ C+       G+Q H + +K  F  + F+ T L++MYA+       + +F+  
Sbjct: 131 TFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQS 190

Query: 187 -----------------------AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
                                  A  LF   P  K+ V+W  MI GY+Q G   +A+  F
Sbjct: 191 NFRDAISFTALIAGYALWGYMDRARQLFDEMP-VKDVVSWNAMIAGYAQMGRSKEALLLF 249

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
            DMR   V  N+ T  S+L+ACA  +A D G  +   I   G  +N+ + +ALIDMY+KC
Sbjct: 250 EDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKC 309

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
           GDL +AR L +     + +SWN MI G+     +KEAL+LF++M A  ++  + T+ S+L
Sbjct: 310 GDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSIL 369

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVI 403
              A    ++  K +H+ I K        ++ +LID+YAK GN+  A  VF+ M+ K + 
Sbjct: 370 PSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLA 429

Query: 404 SWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVF 463
           SW ++I G A HG  ++A + FS M   GI P+ +    ILSAC    +++ GQQ  +  
Sbjct: 430 SWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSM 489

Query: 464 LKSGGCSSLSVD-NSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGK 518
           ++    S  S     ++ +  + G   +A  +  +M  + D   W +L+  C  +G+
Sbjct: 490 VQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGR 546



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/443 (29%), Positives = 224/443 (50%), Gaps = 19/443 (4%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++ SGE++ A  +F++ + RD  ++  +IA YA  G +  A++LF+E P K+  +W+++I
Sbjct: 174 YAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMI 233

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            GY+  G   EA  LF  M+     P++ T+ +VL  C+    L  G     +       
Sbjct: 234 AGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLC 293

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            N  +V  L+DMY+KC  +  A  LF    + ++ ++W  MI GY+      +A+  FR+
Sbjct: 294 SNLKLVNALIDMYSKCGDLQTARELFDDMLE-RDVISWNVMIGGYTHMCSYKEALALFRE 352

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M   GVE  + TF SIL +CA + A D G  +H  I  +    +  + ++LID+YAKCG+
Sbjct: 353 MLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGN 412

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           + +AR++ +  +I +  SWN+MI G A  G   +A  LF KM +  I+ ++ T+  +L+ 
Sbjct: 413 IVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSA 472

Query: 346 --FASNIDLNN---AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
              A  +DL     +  V    +    + Y      +ID+  + G  + A  +   M+ K
Sbjct: 473 CKHAGLVDLGQQFFSSMVQDYKISPKSQHY----GCMIDLLGRAGLFEEAESLLQNMEVK 528

Query: 401 -DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD----HVVVSSILSACAEL-TVLE 454
            D   W SL+  C  HG  E  L      R+  + PD    +V++S+I +   +   V  
Sbjct: 529 PDGAIWGSLLGACRDHGRVE--LGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVAR 586

Query: 455 FGQQVHAVFLKS-GGCSSLSVDN 476
              +++   +K   GC+++ VDN
Sbjct: 587 IRTRLNDRGMKKVPGCTTIEVDN 609



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 124/277 (44%), Gaps = 43/277 (15%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           L  AL+D +S  G++  A +LF+ M +RD  +WN MI  Y +    +EA  LF E     
Sbjct: 298 LVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFRE----- 352

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                                     M   G  P++ T  ++L  C+  G +  G+  H 
Sbjct: 353 --------------------------MLASGVEPTEITFLSILPSCAHLGAIDLGKWIHA 386

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG---KNHVAWTTMITGYSQNG 214
           Y  K    ++  + T L+D+YAKC  I  A  +F    DG   K+  +W  MI G + +G
Sbjct: 387 YINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVF----DGMKIKSLASWNAMICGLAMHG 442

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ- 273
              KA E F  M  +G+E N+ TF  IL+AC      D G Q    ++   ++ +   Q 
Sbjct: 443 QADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQD-YKISPKSQH 501

Query: 274 -SALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMI 308
              +ID+  + G  + A  LL+  E+  + + W S++
Sbjct: 502 YGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLL 538


>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g68930
 gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
 gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 271/675 (40%), Positives = 397/675 (58%), Gaps = 34/675 (5%)

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
           N F    L+  Y+K   I E E  F+  PD ++ V W  +I GYS +G    A++ +  M
Sbjct: 71  NLFSWNNLLLAYSKAGLISEMESTFEKLPD-RDGVTWNVLIEGYSLSGLVGAAVKAYNTM 129

Query: 227 -RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK--- 282
            R       + T  ++L   ++      G Q+HG ++  GFE+ + V S L+ MYA    
Sbjct: 130 MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC 189

Query: 283 ----------------------------CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
                                       CG ++ A +L    E D+ VSW +MI G A+ 
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDS-VSWAAMIKGLAQN 248

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
           G  KEA+  F++M  + +K+D + + SVL        +N  K +H+ I++T F+ + +V 
Sbjct: 249 GLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVG 308

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           +ALIDMY K   L  A  VF+ M+ K+V+SWT+++ G    G  EEA+K F DM+ SGI 
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           PDH  +   +SACA ++ LE G Q H   + SG    ++V NSLV +Y KCG I+D+ R+
Sbjct: 369 PDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRL 428

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
           F+ M+ RD ++WTA++   AQ G+  E +Q +D+M+  G KPD +T  G++ ACS AGL 
Sbjct: 429 FNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLV 488

Query: 555 ENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
           E  + YF+ M   YGI P   HY+CMIDL  RSG+L EA   ++ M   PDA  W  LLS
Sbjct: 489 EKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548

Query: 615 ACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
           ACR  G+LE+G+ AA +L EL+P +   Y  LS++Y++ GKW+  A++R+ M+ + ++KE
Sbjct: 549 ACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKE 608

Query: 675 PGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGK 734
           PG SW++   ++H F ++D   P    IY+K++E+   I + GY PD +F  H+VEE  K
Sbjct: 609 PGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVK 668

Query: 735 EIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNR 794
              L YHSE+LA+AFGL+ +P G PIR+ KNLRVC DCH A K+IS+V  R I++RD+ R
Sbjct: 669 VKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVR 728

Query: 795 FHHFKAGNCSCGDYW 809
           FH FK G CSCGD+W
Sbjct: 729 FHRFKDGTCSCGDFW 743



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 152/495 (30%), Positives = 259/495 (52%), Gaps = 32/495 (6%)

Query: 55  AGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLD 114
           A ++F+++   + F+WN ++ AY+ +G + E +  F + P ++  TW+ LI GYS  GL 
Sbjct: 60  ARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLV 119

Query: 115 IEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG 173
             A + +  M  +     ++ TL  +L+L S  G +  G+Q HG  IK  F+    V + 
Sbjct: 120 GAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSP 179

Query: 174 LVDMYAKCKCIFEAEYLF---------------------KMFPDG--------KNHVAWT 204
           L+ MYA   CI +A+ +F                      M  D         K+ V+W 
Sbjct: 180 LLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWA 239

Query: 205 TMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS 264
            MI G +QNG   +AIECFR+M+V+G++ +Q+ F S+L AC  + A + G Q+H CI+ +
Sbjct: 240 AMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRT 299

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLF 324
            F+ ++YV SALIDMY KC  L  A+ + +  +  N VSW +M+VG+ + G  +EA+ +F
Sbjct: 300 NFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIF 359

Query: 325 KKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
             M    I  D +T    ++  A+   L      H   + +G   Y  V+N+L+ +Y K 
Sbjct: 360 LDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKC 419

Query: 385 GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
           G++D +  +FN M  +D +SWT++++  A  G   E ++ F  M   G+ PD V ++ ++
Sbjct: 420 GDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVI 479

Query: 445 SACAELTVLEFGQQVHAVFLKSGG-CSSLSVDNSLVLVYAKCGCINDANRVFDSM-HTRD 502
           SAC+   ++E GQ+   +     G   S+   + ++ ++++ G + +A R  + M    D
Sbjct: 480 SACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPD 539

Query: 503 VITWTALIMGCAQNG 517
            I WT L+  C   G
Sbjct: 540 AIGWTTLLSACRNKG 554



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 125/501 (24%), Positives = 229/501 (45%), Gaps = 84/501 (16%)

Query: 242 LTACAAVSARD---FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI 298
           +  C  + AR+   +   +HG I+ +      ++ + ++  YA       ARR+ +    
Sbjct: 10  IKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQ 69

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARD-------------------------IK 333
            N  SWN++++ +++ G   E  S F+K+  RD                           
Sbjct: 70  PNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM 129

Query: 334 IDDF-------TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
           + DF       T  ++L   +SN  ++  K +H  ++K GFE Y  V + L+ MYA  G 
Sbjct: 130 MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC 189

Query: 387 LDCAFMVFNLMQD------------------------------KDVISWTSLITGCAYHG 416
           +  A  VF  + D                              KD +SW ++I G A +G
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNG 249

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
             +EA++ F +M++ G+  D     S+L AC  L  +  G+Q+HA  +++     + V +
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           +L+ +Y KC C++ A  VFD M  ++V++WTA+++G  Q G+ +EA++ +  M   G  P
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDP 369

Query: 537 DYITFVGLLFACSH-AGLAENARWYFESMDKVYGIKPGPDHYAC----MIDLLGRSGKLI 591
           D+ T    + AC++ + L E ++++ ++      I  G  HY      ++ L G+ G + 
Sbjct: 370 DHYTLGQAISACANVSSLEEGSQFHGKA------ITSGLIHYVTVSNSLVTLYGKCGDID 423

Query: 592 EAKALLDQMVGEPDATVWKALLSA----CRVHGDLELGERAANNLFELEPMNAMPYVQLS 647
           ++  L ++M    DA  W A++SA     R    ++L ++   +   L+P + +    + 
Sbjct: 424 DSTRLFNEM-NVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQH--GLKP-DGVTLTGVI 479

Query: 648 NMYSTAGKWEDAARVRKLMKS 668
           +  S AG  E   R  KLM S
Sbjct: 480 SACSRAGLVEKGQRYFKLMTS 500


>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
 gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
          Length = 736

 Score =  521 bits (1341), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 291/706 (41%), Positives = 403/706 (57%), Gaps = 37/706 (5%)

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC--IFEAEYLFKMFPDG 197
           L L S    LQ  +Q H   IKT      F ++ L++  A      +  A  LFK   + 
Sbjct: 32  LTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRN- 90

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
            NHV W  MI G S +   F A+E +  M   G E N++TFPSI  +C  +     G QV
Sbjct: 91  PNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQV 150

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDL------------------------------- 286
           H  +L  G E N +V ++LI+MYA+ G+L                               
Sbjct: 151 HAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFL 210

Query: 287 DSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-C 345
           D AR L +   + + VSWN+MI G+A+ G  +EA++ F++M    +  +  T  SVL+ C
Sbjct: 211 DEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSAC 270

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
             S   L     V S I   G      + N LIDMY K G+L+ A  +F  +QDK+V+SW
Sbjct: 271 AQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSW 330

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
             +I G  +   Y+EAL  F  M  S I P+ V   SIL ACA L  L+ G+ VHA   K
Sbjct: 331 NVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDK 390

Query: 466 SGGC--SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEAL 523
           +     +++++  SL+ +YAKCG +  A R+FD M+T+ + TW A+I G A +G    AL
Sbjct: 391 NMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTAL 450

Query: 524 QFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDL 583
             + +M + G  PD ITFVG+L AC HAGL    R YF SM + Y + P   HY CMIDL
Sbjct: 451 GLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDL 510

Query: 584 LGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPY 643
            GR+G   EA+ L+  M  +PD  +W +LL ACR+H  +EL E  A +LFELEP N   Y
Sbjct: 511 FGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAY 570

Query: 644 VQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIY 703
           V LSN+Y+ AG+WED A++R  +    ++K PGCS +E +S VH F+  D+ HP   +IY
Sbjct: 571 VLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIY 630

Query: 704 SKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIF 763
             +DEI + +++AG+VPD +  L++++EE KE  L++HSEKLA+AFGL++   G  IRI 
Sbjct: 631 KMLDEIDMRLEKAGFVPDTSEVLYDMDEEWKEGVLSHHSEKLAIAFGLISTKPGTTIRIM 690

Query: 764 KNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           KNLRVCG+CH+A K IS ++ R II RD NRFHHFK G+CSC DYW
Sbjct: 691 KNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCKDYW 736



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 144/474 (30%), Positives = 228/474 (48%), Gaps = 37/474 (7%)

Query: 76  AYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYT 135
           A +  G L  A  LF      N   W+ +I G S+      A E +  M   G  P++YT
Sbjct: 71  AVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYT 130

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK------CKCIF---- 185
             ++ + C+       G+Q H + +K   + NAFV T L++MYA+       + +F    
Sbjct: 131 FPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSS 190

Query: 186 ---------------------EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
                                EA  LF   P  ++ V+W  MI+GY+Q+G   +A+  F 
Sbjct: 191 MRDAVSFTALITGYASKGFLDEARELFDEIP-VRDVVSWNAMISGYAQSGRVEEAMAFFE 249

Query: 225 DMRVEGVESNQFTFPSILTACA-AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
           +MR   V  N  T  S+L+ACA + S+   G  V   I   G  +N+ + + LIDMY KC
Sbjct: 250 EMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKC 309

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
           GDL+ A  L E  +  N VSWN MI G+     +KEAL LF++M   +I  +D T+ S+L
Sbjct: 310 GDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSIL 369

Query: 344 NCFASNIDLNNAKSVHSLIVKT--GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
              A+   L+  K VH+ + K     +    +  +LIDMYAK G+L  A  +F+ M  K 
Sbjct: 370 PACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKS 429

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
           + +W ++I+G A HG  + AL  FS M   G  PD +    +L+AC    +L  G++  +
Sbjct: 430 LATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFS 489

Query: 462 VFLKSGGCS-SLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
             ++    S  L     ++ ++ + G  ++A  +  +M  + D   W +L+  C
Sbjct: 490 SMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGAC 543



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/381 (33%), Positives = 193/381 (50%), Gaps = 6/381 (1%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++ +GE+  A  +F+K S RD  ++  +I  YA+ G L EA++LF+E P ++  +W+++I
Sbjct: 173 YAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMI 232

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKG-LLQRGEQFHGYAIKTCF 164
            GY+  G   EA   F +M+     P+  T+ +VL  C+  G  LQ G     +      
Sbjct: 233 SGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGL 292

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
             N  +V GL+DMY KC  + EA  LF+   D KN V+W  MI GY+      +A+  FR
Sbjct: 293 GSNIRLVNGLIDMYVKCGDLEEASNLFEKIQD-KNVVSWNVMIGGYTHMSCYKEALGLFR 351

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS--GFEANVYVQSALIDMYAK 282
            M    ++ N  TF SIL ACA + A D G  VH  +  +    +  V + ++LIDMYAK
Sbjct: 352 RMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAK 411

Query: 283 CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
           CGDL  A+R+ +     +  +WN+MI GFA  G    AL LF +M +     DD T+  V
Sbjct: 412 CGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGV 471

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN-NALIDMYAKQGNLDCA-FMVFNLMQDK 400
           L        L+  +   S +++      K  +   +ID++ + G  D A  +V N+    
Sbjct: 472 LTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKP 531

Query: 401 DVISWTSLITGCAYHGSYEEA 421
           D   W SL+  C  H   E A
Sbjct: 532 DGAIWCSLLGACRIHRRIELA 552


>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  520 bits (1339), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 282/767 (36%), Positives = 438/767 (57%), Gaps = 33/767 (4%)

Query: 40   NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
            N  +  FS+   ++EA  +F+ M++ D  +WN MI+AYA+ G  RE+ + F+        
Sbjct: 336  NSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFH-------- 387

Query: 100  TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
             W   ++  +N               L        ++DN          L+ G   HG  
Sbjct: 388  -WMRHLHNETN------------STTLSSLLSVCSSVDN----------LKWGRGIHGLV 424

Query: 160  IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
            +K   D N  +   L+ +Y++     +AE +F+   + ++ ++W +M+  Y Q+G     
Sbjct: 425  VKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTE-RDLISWNSMMACYVQDGKCLDG 483

Query: 220  IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
            ++   ++   G   N  TF S L AC+          VH  I+ +GF   + V +AL+ M
Sbjct: 484  LKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTM 543

Query: 280  YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
            Y K G +  A+++L+     + V+WN++I G A      EA+  +K +  + I  +  T 
Sbjct: 544  YGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITM 603

Query: 340  PSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
             SVL  C A +  L +   +H+ IV TGFE   +V N+LI MYAK G+L+ +  +F+ + 
Sbjct: 604  VSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLG 663

Query: 399  DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
            +K  I+W +++   A+HG  EEALK F +MR  G+  D    S  L+A A L VLE GQQ
Sbjct: 664  NKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQ 723

Query: 459  VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK 518
            +H + +K G  S L V N+ + +Y KCG ++D  ++      R  ++W  LI   A++G 
Sbjct: 724  LHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGC 783

Query: 519  GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA 578
             ++A + + +ML  G KPD++TFV LL AC+H GL +    Y++SM + +G+ PG +H  
Sbjct: 784  FQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCV 843

Query: 579  CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM 638
            C+IDLLGRSG+L  A+  + +M   P+   W++LL+ACR+HG+LEL  + A +L EL+P 
Sbjct: 844  CIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPS 903

Query: 639  NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPL 698
            +   YV  SN+ +T+GKWED   +RK M S  I+K+P CSWV+   +VH F   ++ HP 
Sbjct: 904  DDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQ 963

Query: 699  RTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA 758
             + I +K+ E+M + KEAGYVPD +FALH+++EE KE  L  HSE+LA+AFGL+  P+ +
Sbjct: 964  ASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESS 1023

Query: 759  PIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSC 805
             +RIFKNLRVCGDCH+  K++S +  R I+LRD  RFHHF  G CSC
Sbjct: 1024 TLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSC 1070



 Score =  268 bits (686), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 173/563 (30%), Positives = 291/563 (51%), Gaps = 21/563 (3%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  NT+I  Y+  G +  A+ +F+E   +N  +WS+++ GY   GL  EA  LF QM   
Sbjct: 130 FQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGL 189

Query: 128 GYRPSQYTLDNVLRLCSLKGLL-QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
           G  P+ + + +++  CS  G +   G Q HG+ +KT    + +V T LV  Y     ++ 
Sbjct: 190 GVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYN 249

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A+ LF+  PD  N V+WT+++ GYS +G   + +  ++ MR EGV  NQ TF ++ ++C 
Sbjct: 250 AQKLFEEMPD-HNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCG 308

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            +  +  G QV G I+  GFE +V V ++LI M++    ++ A  + ++    + +SWN+
Sbjct: 309 LLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNA 368

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           MI  +A  G  +E+L  F  M     + +  T  S+L+  +S  +L   + +H L+VK G
Sbjct: 369 MISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLG 428

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
            +    + N L+ +Y++ G  + A +VF  M ++D+ISW S++      G   + LK  +
Sbjct: 429 LDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILA 488

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
           ++   G   +HV  +S L+AC+    L   + VHA+ + +G    L V N+LV +Y K G
Sbjct: 489 ELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLG 548

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
            + +A +V  +M   D +TW ALI G A+N +  EA++ Y  +  +G   +YIT V +L 
Sbjct: 549 MMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLG 608

Query: 547 ACSHA------GLAENARWY---FESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALL 597
           ACS        G+  +A      FES D V            +I +  + G L  +  + 
Sbjct: 609 ACSAPDDLLKHGMPIHAHIVLTGFESDDYVKN---------SLITMYAKCGDLNSSNYIF 659

Query: 598 DQMVGEPDATVWKALLSACRVHG 620
           D + G      W A+++A   HG
Sbjct: 660 DGL-GNKSPITWNAMVAANAHHG 681



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 162/573 (28%), Positives = 289/573 (50%), Gaps = 4/573 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +    ++  Y + G +  A+KLF E P  N  +W+SL+ GYS+ G   E   ++ +M+
Sbjct: 230 DVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMR 289

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            EG   +Q T   V   C L      G Q  G+ I+  F+ +  V   L+ M++    + 
Sbjct: 290 QEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVE 349

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           EA Y+F    +  + ++W  MI+ Y+ +G   +++ CF  MR    E+N  T  S+L+ C
Sbjct: 350 EACYVFDHMNEC-DIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVC 408

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           ++V    +G  +HG ++  G ++NV + + L+ +Y++ G  + A  + +     + +SWN
Sbjct: 409 SSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWN 468

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           SM+  + + G   + L +  ++      ++  T+ S L   ++   L  +K VH+LI+  
Sbjct: 469 SMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVA 528

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           GF  +  V NAL+ MY K G +  A  V   M   D ++W +LI G A +    EA+K +
Sbjct: 529 GFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAY 588

Query: 426 SDMRISGICPDHVVVSSILSAC-AELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
             +R  GI  +++ + S+L AC A   +L+ G  +HA  + +G  S   V NSL+ +YAK
Sbjct: 589 KLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAK 648

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG +N +N +FD +  +  ITW A++   A +G G+EAL+ + +M   G   D  +F G 
Sbjct: 649 CGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGG 708

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L A ++  + E  +     + K+ G +         +D+ G+ G++ +   +L Q +   
Sbjct: 709 LAATANLAVLEEGQQLHGLVIKL-GFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRS 767

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEP 637
             + W  L+SA   HG  +      + + +L P
Sbjct: 768 RLS-WNILISAFARHGCFQKARETFHEMLKLGP 799



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 161/550 (29%), Positives = 277/550 (50%), Gaps = 20/550 (3%)

Query: 77  YANSGRLREAKKLFNETPFKNFFT------WSSLIYGYSNYG-LDIEAFELFWQMQLEGY 129
           +A    +  A  L NETP +NF          +   G   +G LD +  ++F Q Q   Y
Sbjct: 30  WAPVSTITTASALINETPVENFAEQVKDDDLKTSNAGSRRWGCLDGDIAKVFLQQQHTDY 89

Query: 130 RPSQYTLDNVLRLCSLKGLLQ-----RGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
                   N      LKG  +      G+  H + I    +L  F    L++MY+K   I
Sbjct: 90  GIRCLNAVNF----PLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNI 145

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
             A Y+F      +N  +W+TM++GY + G   +A+  F  M   GVE N F   S++TA
Sbjct: 146 EHARYVFDEMRH-RNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITA 204

Query: 245 CAAVS-ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           C+      D G QVHG ++ +G   +VYV +AL+  Y   G + +A++L E     N VS
Sbjct: 205 CSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVS 264

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           W S++VG++  G   E L+++++M    +  +  T+ +V +      D      V   I+
Sbjct: 265 WTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHII 324

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           + GFE    V N+LI M++   +++ A  VF+ M + D+ISW ++I+  A+HG   E+L+
Sbjct: 325 QYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLR 384

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            F  MR      +   +SS+LS C+ +  L++G+ +H + +K G  S++ + N+L+ +Y+
Sbjct: 385 CFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYS 444

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           + G   DA  VF +M  RD+I+W +++    Q+GK  + L+   ++L  G   +++TF  
Sbjct: 445 EAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFAS 504

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
            L ACS+      ++    ++  V G          ++ + G+ G ++EAK +L Q + +
Sbjct: 505 ALAACSNPECLIESK-IVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVL-QTMPQ 562

Query: 604 PDATVWKALL 613
           PD   W AL+
Sbjct: 563 PDRVTWNALI 572



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 191/396 (48%), Gaps = 24/396 (6%)

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
           N   FP  L   + ++++  G  +H   +       ++  + LI+MY+K G+++ AR + 
Sbjct: 95  NAVNFP--LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVF 152

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDL 352
           +     NE SW++M+ G+ R G ++EA+ LF +M    ++ + F   S++  C  S    
Sbjct: 153 DEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMA 212

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
           +    VH  +VKTG  G  +V  AL+  Y   G +  A  +F  M D +V+SWTSL+ G 
Sbjct: 213 DEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGY 272

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
           +  G+  E L  +  MR  G+  +    +++ S+C  L     G QV    ++ G   S+
Sbjct: 273 SDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSV 332

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
           SV NSL+ +++    + +A  VFD M+  D+I+W A+I   A +G  +E+L+ +  M   
Sbjct: 333 SVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHL 392

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPGPDHYACMIDLL------ 584
             + +  T   LL         +N +W       ++G  +K G D   C+ + L      
Sbjct: 393 HNETNSTTLSSLLSV---CSSVDNLKW----GRGIHGLVVKLGLDSNVCICNTLLTLYSE 445

Query: 585 -GRSGKLIEAKALLDQMVGEPDATVWKALLSACRVH 619
            GRS    E   L+ Q + E D   W +++ AC V 
Sbjct: 446 AGRS----EDAELVFQAMTERDLISWNSMM-ACYVQ 476



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 138/269 (51%), Gaps = 7/269 (2%)

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
            K++H+  +        F  N LI+MY+K GN++ A  VF+ M+ ++  SW+++++G   
Sbjct: 113 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 172

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL-EFGQQVHAVFLKSGGCSSLS 473
            G YEEA+  F  M   G+ P+  +V+S+++AC+    + + G QVH   +K+G    + 
Sbjct: 173 VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVY 232

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
           V  +LV  Y   G + +A ++F+ M   +V++WT+L++G + +G   E L  Y +M   G
Sbjct: 233 VGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEG 292

Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKV--YGIKPGPDHYACMIDLLGRSGKLI 591
              +  TF  +  +C   GL E+    ++ +  +  YG +        +I +      + 
Sbjct: 293 VSGNQNTFATVTSSC---GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVE 349

Query: 592 EAKALLDQMVGEPDATVWKALLSACRVHG 620
           EA  + D M  E D   W A++SA   HG
Sbjct: 350 EACYVFDHM-NECDIISWNAMISAYAHHG 377


>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  520 bits (1339), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 270/744 (36%), Positives = 418/744 (56%), Gaps = 54/744 (7%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           DG   + ++  Y   G LRE +++F++   +  F W+ L+ GY+  G   E+  LF +M+
Sbjct: 135 DGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMR 194

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G R  +                                                    
Sbjct: 195 ELGIRRVE---------------------------------------------------- 202

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A  LF    D ++ ++W +MI+GY  NG   K ++ F  M + G+ ++  T  S++  C
Sbjct: 203 SARKLFDELGD-RDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGC 261

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           +       G  +HG  + + F   + + + L+DMY+K G+L+SA ++ E     + VSW 
Sbjct: 262 SNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWT 321

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           SMI G+AR+G    ++ LF +M    I  D FT  ++L+  A    L N K VH+ I + 
Sbjct: 322 SMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKEN 381

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
             +   FV+NAL+DMYAK G++  A  VF+ MQ KD++SW ++I G + +    EAL  F
Sbjct: 382 KMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLF 441

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
            +M+ +   P+ + ++ IL ACA L  LE GQ++H   L++G      V N+LV +Y KC
Sbjct: 442 VEMQYNSK-PNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKC 500

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G +  A  +FD +  +D+++WT +I G   +G G EA+  +++M   G +PD ++F+ +L
Sbjct: 501 GALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISIL 560

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
           +ACSH+GL +    +F  M     I+P  +HYAC++DLL R+G L +A   +  M  EPD
Sbjct: 561 YACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPD 620

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
           AT+W ALL  CR++ D++L E+ A ++FELEP N   YV L+N+Y+ A KWE+  ++R+ 
Sbjct: 621 ATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRER 680

Query: 666 MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFA 725
           +  RG+RK PGCSW+E   +VHIF++ D  HPL   I   + +    +KE G+ P M +A
Sbjct: 681 IGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYA 740

Query: 726 LHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLR 785
           L   ++  KE+ L  HSEK+A+AFG+L+LP G  +R+ KNLRVCGDCH   K++S +  R
Sbjct: 741 LIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKR 800

Query: 786 HIILRDSNRFHHFKAGNCSCGDYW 809
            IILRDSNRFHHFK G+CSC  +W
Sbjct: 801 DIILRDSNRFHHFKDGSCSCRGHW 824



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 168/520 (32%), Positives = 271/520 (52%), Gaps = 27/520 (5%)

Query: 18  KIIGPARYTHNV--GNSVKPASDLNRALV-DFSNSGEIDEAGQLFEKMSDRDGFTWNTMI 74
           K I   R  H++   N V+    L   LV  +   G++ E  ++F+K+++   F WN ++
Sbjct: 115 KSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLM 174

Query: 75  AAYANSGRLRE------------------AKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
             YA  G  RE                  A+KLF+E   ++  +W+S+I GY + GL  +
Sbjct: 175 NGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEK 234

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
             +LF QM L G      T+ +V+  CS  G+L  G   HGYAIK  F     +   L+D
Sbjct: 235 GLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLD 294

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           MY+K   +  A  +F+   + ++ V+WT+MI GY++ G    ++  F +M  EG+  + F
Sbjct: 295 MYSKSGNLNSAIQVFETMGE-RSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIF 353

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           T  +IL ACA     + G  VH  I  +  +++++V +AL+DMYAKCG +  A  +    
Sbjct: 354 TITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEM 413

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
           ++ + VSWN+MI G+++     EAL+LF +M     K +  T   +L   AS   L   +
Sbjct: 414 QVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITMACILPACASLAALERGQ 472

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H  I++ GF   + V NAL+DMY K G L  A ++F+++ +KD++SWT +I G   HG
Sbjct: 473 EIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHG 532

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
              EA+  F++MR SGI PD V   SIL AC+   +L+ G     + +++  C     ++
Sbjct: 533 YGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNM-MRNNCCIEPKSEH 591

Query: 477 --SLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
              +V + A+ G ++ A +    M    D   W AL+ GC
Sbjct: 592 YACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGC 631



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 209/435 (48%), Gaps = 56/435 (12%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE-- 294
           T+ S+L  CA + +   G ++H  I S+  E +  + S L+ MY  CGDL   RR+ +  
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162

Query: 295 --------------YSEIDN---------------------------------EVSWNSM 307
                         Y++I N                                  +SWNSM
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I G+   G  ++ L LF++M    I  D  T  SV+   ++   L   +++H   +K  F
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASF 282

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
                +NN L+DMY+K GNL+ A  VF  M ++ V+SWTS+I G A  G  + +++ F +
Sbjct: 283 GKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHE 342

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           M   GI PD   +++IL ACA   +LE G+ VH    ++   S L V N+L+ +YAKCG 
Sbjct: 343 MEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGS 402

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           + DA+ VF  M  +D+++W  +I G ++N    EAL  + +M    +KP+ IT   +L A
Sbjct: 403 MGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEM-QYNSKPNSITMACILPA 461

Query: 548 C-SHAGLAENARWYFESMDKVYGIKPGPDHYA-CMIDLLGRSGKLIEAKALLDQMVGEPD 605
           C S A L      +   +   + +     H A  ++D+  + G L  A+ L D M+ E D
Sbjct: 462 CASLAALERGQEIHGHILRNGFSLD---RHVANALVDMYLKCGALGLARLLFD-MIPEKD 517

Query: 606 ATVWKALLSACRVHG 620
              W  +++   +HG
Sbjct: 518 LVSWTVMIAGYGMHG 532


>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Glycine max]
          Length = 785

 Score =  520 bits (1339), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 282/721 (39%), Positives = 407/721 (56%), Gaps = 72/721 (9%)

Query: 155 FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
           F    +KT F  N      ++  +AK   +  A  +F   P   + V+WTTMI GY+  G
Sbjct: 71  FDEMPLKTTFSWNT-----ILSAHAKAGNLDSARRVFDEIPQ-PDSVSWTTMIVGYNHLG 124

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQS 274
               A+  F  M   G+   QFTF ++L +CAA  A D G +VH  ++  G    V V +
Sbjct: 125 LFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVAN 184

Query: 275 ALIDMYAKCGD-------------------------------LDSARRLLEYSEIDNEVS 303
           +L++MYAKCGD                                D A  L +     + VS
Sbjct: 185 SLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVS 244

Query: 304 WNSMIVGFARQGFHKEALSLFKKM-HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           WNS+I G+  QG+   AL  F  M  +  +K D FT  SVL+  A+   L   K +H+ I
Sbjct: 245 WNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHI 304

Query: 363 VKTGFEGYKFVNNALIDMYAKQG---------------------------------NLDC 389
           V+   +    V NALI MYAK G                                 ++D 
Sbjct: 305 VRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDP 364

Query: 390 AFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE 449
           A  +F+ ++ +DV++WT++I G A +G   +AL  F  M   G  P++  ++++LS  + 
Sbjct: 365 ARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISS 424

Query: 450 LTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT-RDVITWTA 508
           L  L+ G+Q+HAV ++    SS+SV N+L+ +Y++ G I DA ++F+ + + RD +TWT+
Sbjct: 425 LASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTS 484

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
           +I+  AQ+G G EA++ +++ML    KPD+IT+VG+L AC+H GL E  + YF  M  V+
Sbjct: 485 MILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVH 544

Query: 569 GIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
            I+P   HYACMIDLLGR+G L EA   +  M  EPD   W +LLS+CRVH  ++L + A
Sbjct: 545 NIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVA 604

Query: 629 ANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHI 688
           A  L  ++P N+  Y+ L+N  S  GKWEDAA+VRK MK + ++KE G SWV+  ++VHI
Sbjct: 605 AEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHI 664

Query: 689 FISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVA 748
           F  ED  HP R  IY  I +I   IK+ G++PD N  LH++E+E KE  L +HSEKLA+A
Sbjct: 665 FGVEDALHPQRDAIYCMISKIWKEIKKMGFIPDTNSVLHDLEQEVKEQILRHHSEKLAIA 724

Query: 749 FGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDY 808
           F L+  P+   +RI KNLRVC DCH+A++YIS +  R II+RD+ RFHHFK G+CSC DY
Sbjct: 725 FALINTPKHTTVRIMKNLRVCNDCHSAIRYISLLVEREIIVRDATRFHHFKDGSCSCQDY 784

Query: 809 W 809
           W
Sbjct: 785 W 785



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 152/542 (28%), Positives = 264/542 (48%), Gaps = 69/542 (12%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  L  +  +G   +A +LF++M  +  F+WNT+++A+A +G L  A+++F+E P  +  
Sbjct: 52  NNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSV 111

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           +W+++I GY++ GL   A   F +M   G  P+Q+T  NVL  C+    L  G++ H + 
Sbjct: 112 SWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFV 171

Query: 160 IKTCFDLNAFVVTGLVDMYAKC------KCIFE-------------------------AE 188
           +K        V   L++MYAKC      K +F+                         A 
Sbjct: 172 VKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLAL 231

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILTACAA 247
            LF    D  + V+W ++ITGY   GY  +A+E F  M +   ++ ++FT  S+L+ACA 
Sbjct: 232 ALFDQMTD-PDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACAN 290

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS----------- 296
             +   G Q+H  I+ +  +    V +ALI MYAK G ++ A R++E +           
Sbjct: 291 RESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFT 350

Query: 297 ----------EID------------NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKI 334
                     +ID            + V+W +MIVG+A+ G   +AL LF+ M     K 
Sbjct: 351 SLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKP 410

Query: 335 DDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVF 394
           +++T  +VL+  +S   L++ K +H++ ++        V NALI MY++ G++  A  +F
Sbjct: 411 NNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIF 470

Query: 395 N-LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           N +   +D ++WTS+I   A HG   EA++ F  M    + PDH+    +LSAC  + ++
Sbjct: 471 NHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLV 530

Query: 454 EFGQQVHAVFLKSGGCSSLSVDNS-LVLVYAKCGCINDANRVFDSMHTR-DVITWTALIM 511
           E G+    +          S   + ++ +  + G + +A     +M    DV+ W +L+ 
Sbjct: 531 EQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLS 590

Query: 512 GC 513
            C
Sbjct: 591 SC 592



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 161/355 (45%), Gaps = 21/355 (5%)

Query: 327 MHARDIK-----IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMY 381
           +HAR IK     +  F   ++LN +   +   ++   H L  +   +   F  N ++  +
Sbjct: 34  IHARIIKHGLRYLGVFLTNNLLNLY---VKTGSSSDAHRLFDEMPLKT-TFSWNTILSAH 89

Query: 382 AKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVS 441
           AK GNLD A  VF+ +   D +SWT++I G  + G ++ A+  F  M  SGI P     +
Sbjct: 90  AKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFT 149

Query: 442 SILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR 501
           ++L++CA    L+ G++VH+  +K G    + V NSL+ +YAKCG    A  VFD M  +
Sbjct: 150 NVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLK 209

Query: 502 DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYF 561
           D  TW  +I    Q  +   AL  +DQM    T PD +++  ++    H G    A   F
Sbjct: 210 DTSTWNTMISMHMQFCQFDLALALFDQM----TDPDIVSWNSIITGYCHQGYDIRALETF 265

Query: 562 ESMDKVYGIKP-----GPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSAC 616
             M K   +KP     G    AC      + GK I A  +   +  +    V  AL+S  
Sbjct: 266 SFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADV--DIAGAVGNALISMY 323

Query: 617 RVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
              G +E+  R    +     +N + +  L + Y   G  + A  +   +K R +
Sbjct: 324 AKSGAVEVAHRIV-EITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDV 377



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 139/294 (47%), Gaps = 5/294 (1%)

Query: 20  IGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFE--KMSDRDGFTWNTMIAA 76
           +G   + H V   V  A  +  AL+  ++ SG ++ A ++ E       +   + +++  
Sbjct: 296 LGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDG 355

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
           Y   G +  A+ +F+    ++   W+++I GY+  GL  +A  LF  M  EG +P+ YTL
Sbjct: 356 YFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTL 415

Query: 137 DNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD 196
             VL + S    L  G+Q H  AI+     +  V   L+ MY++   I +A  +F     
Sbjct: 416 AAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICS 475

Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
            ++ + WT+MI   +Q+G G +AIE F  M    ++ +  T+  +L+AC  V   + G  
Sbjct: 476 YRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKS 535

Query: 257 VHGCILS-SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE-VSWNSMI 308
               + +    E      + +ID+  + G L+ A   +    I+ + V+W S++
Sbjct: 536 YFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLL 589


>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera]
 gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 266/680 (39%), Positives = 407/680 (59%), Gaps = 7/680 (1%)

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
           L  +LR CS  GL  +G Q H  A+   F  +  +   L+DMY KC  +  A  +F    
Sbjct: 7   LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGA 255
           + +N V+WT ++ GY Q G    ++    +M   GV+ N+FTF + L AC A+   + G 
Sbjct: 67  E-RNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGM 125

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           Q+HG  + SGFE    V +A IDMY+KCG +  A ++       N VSWN+MI G   +G
Sbjct: 126 QIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEG 185

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF--EGYKFV 373
             +++L LF++M  +    D+FT+ S L    +   +     +H+ ++  GF       +
Sbjct: 186 NGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNII 245

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
            +A++D+YAK G L  A  VF+ ++ K++ISW++LI G A  G+  EA+  F  +R S  
Sbjct: 246 ASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVS 305

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
             D  V+S ++   A+L ++E G+Q+H   LK      +SV NS++ +Y KCG   +A R
Sbjct: 306 NVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAER 365

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGL 553
           +F  M  R+V++WT +I G  ++G G++A+  +++M   G + D + ++ LL ACSH+GL
Sbjct: 366 LFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGL 425

Query: 554 AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
              ++ YF  +   + +KP  +HYACM+D+LGR+G+L EAK L++ M  +P+  +W+ LL
Sbjct: 426 IRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLL 485

Query: 614 SACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRK 673
           SACRVHG+LE+G      LF ++  N + YV +SN+Y+ AG W++  RVRKL+K++G++K
Sbjct: 486 SACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKK 545

Query: 674 EPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIK-EAGYVPDMNFALHNVEEE 732
           E G SWVE N ++H F   D  HPL   I+  + E+   +K E GY   + FALH+VEEE
Sbjct: 546 EAGQSWVEINKEIHFFYGGDDTHPLTEKIHEMLKEMERRVKEEVGYAYGLRFALHDVEEE 605

Query: 733 GKEIGLAYHSEKLAVAFGLL---TLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIIL 789
            KE  L  HSEKLA+   L+      +G  IR+FKNLRVCGDCH  +K +S +  +  ++
Sbjct: 606 SKEENLRVHSEKLAIGLALVCDGMEKKGGVIRVFKNLRVCGDCHEFIKGLSKILKKVFVV 665

Query: 790 RDSNRFHHFKAGNCSCGDYW 809
           RD+NRFH F+ G CSCGDYW
Sbjct: 666 RDANRFHRFEDGLCSCGDYW 685



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/451 (30%), Positives = 240/451 (53%), Gaps = 5/451 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +I  Y    R+  A  +F+    +N  +W++L+ GY   G    +  L  +M   G +
Sbjct: 43  NDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVK 102

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+++T    L+ C   G+++ G Q HG  +K+ F+  + V    +DMY+KC  I  AE +
Sbjct: 103 PNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQV 162

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P  +N V+W  MI G++  G G K++  F+ M+ +G   ++FTF S L AC A+ A
Sbjct: 163 FNKMPF-RNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGA 221

Query: 251 RDFGAQVHGCILSSGFEANV--YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
              G Q+H  +++ GF  ++   + SA++D+YAKCG L  A+++ +  E  N +SW+++I
Sbjct: 222 IRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALI 281

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
            GFA++G   EA+ LF+++      +D F    ++  FA    +   K +H  I+K    
Sbjct: 282 QGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSG 341

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
               V N++IDMY K G  + A  +F+ MQ ++V+SWT +ITG   HG  E+A+  F+ M
Sbjct: 342 LDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRM 401

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAKCGC 487
           ++ GI  D V   ++LSAC+   ++   Q+  +    +     ++     +V +  + G 
Sbjct: 402 QLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQ 461

Query: 488 INDANRVFDSMHTR-DVITWTALIMGCAQNG 517
           + +A  + ++M  + +   W  L+  C  +G
Sbjct: 462 LKEAKNLIENMKLKPNEGIWQTLLSACRVHG 492


>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 802

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 276/709 (38%), Positives = 415/709 (58%), Gaps = 67/709 (9%)

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
           N F    L+ +YAK   + +A  +F   P+ ++ V+WT M+ G ++ G   +AI+ F DM
Sbjct: 95  NVFTWNSLLSLYAKSGRLADARAVFAEMPE-RDPVSWTVMVVGLNRVGRFGEAIKMFLDM 153

Query: 227 RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDL 286
             +G+   QFT  ++L++CAA  AR  G +VH  ++  G  + V V +++++MY KCGD 
Sbjct: 154 VTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDA 213

Query: 287 DSARRLLE--------------------------YSEIDNE-----VSWNSMIVGFARQG 315
           ++AR + E                           S  +N      VSWN++I G+ + G
Sbjct: 214 ETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNG 273

Query: 316 FHKEALSLFKKMHA-RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
            + +AL  F +M +   +  D+FT  SVL+  A+   ++  K VH+ I+++       V 
Sbjct: 274 LNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVT 333

Query: 375 NALIDMYAKQGNLDCAFMV---------------------------------FNLMQDKD 401
           NALI MYAK G+++ A  V                                 F++M ++D
Sbjct: 334 NALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRD 393

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
           V++WT++I G   +G  +EA++ F  M  SG  P+   V+++LS CA L  LE+G+Q+H 
Sbjct: 394 VVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHC 453

Query: 462 VFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGK 520
             ++S    S SV NS+V +YA+ G +  A RVFD +H R + +TWT++I+  AQ+G G+
Sbjct: 454 KAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGE 513

Query: 521 EALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACM 580
           +A+  +++ML  G KPD ITFVG+L AC+H G  +  + YF+ +   +GI P   HYACM
Sbjct: 514 DAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACM 573

Query: 581 IDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNA 640
           +DLL R+G   EA+  + QM  EPDA  W +LLSACRVH + +L E AA  L  ++P N+
Sbjct: 574 VDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNS 633

Query: 641 MPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRT 700
             Y  LSN+YS  G+W DAA++ K  K + ++KE G SW    ++VH+F ++D  HP R 
Sbjct: 634 GAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADDVLHPQRD 693

Query: 701 DIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPI 760
            +Y    ++   IK+AG+VPD+   LH+V++E KE  L+ HSEKLA+AFGL++ P+   +
Sbjct: 694 TVYRTAAKMWDDIKKAGFVPDLQSVLHDVDDELKEEMLSRHSEKLAIAFGLVSTPEKTTL 753

Query: 761 RIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           RI KNLRVC DCHTA+K+IS V  R IILRD+ RFHHFK G CSC DYW
Sbjct: 754 RIMKNLRVCNDCHTAIKFISKVADREIILRDATRFHHFKDGFCSCKDYW 802



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 151/530 (28%), Positives = 256/530 (48%), Gaps = 71/530 (13%)

Query: 54  EAGQLFEKM--SDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNY 111
           EA +LF+++  + R+ FTWN++++ YA SGRL +A+ +F E P ++  +W+ ++ G +  
Sbjct: 81  EARRLFDEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRV 140

Query: 112 GLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV 171
           G   EA ++F  M  +G  P+Q+TL NVL  C+       G + H + +K        V 
Sbjct: 141 GRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVA 200

Query: 172 TGLVDMYAKC------KCIFE-------------------------AEYLFKMFPDGKNH 200
             +++MY KC      + +FE                         A  LF+  PD +  
Sbjct: 201 NSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPD-RTI 259

Query: 201 VAWTTMITGYSQNGYGFKAIECF-RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG 259
           V+W  +I GY+QNG   KA+  F R +    +  ++FT  S+L+ACA +     G QVH 
Sbjct: 260 VSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHA 319

Query: 260 CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI--------------------- 298
            IL S       V +ALI MYAK G +++AR +++ + +                     
Sbjct: 320 YILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDM 379

Query: 299 ------------DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCF 346
                        + V+W +MIVG+ + G + EA+ LF+ M     + + +T  +VL+  
Sbjct: 380 KHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVC 439

Query: 347 ASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISW 405
           AS   L   K +H   +++  E    V+N+++ MYA+ G+L  A  VF+ +   K+ ++W
Sbjct: 440 ASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTW 499

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ-VHAVFL 464
           TS+I   A HG  E+A+  F +M   G+ PD +    +LSAC  +  ++ G++    +  
Sbjct: 500 TSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQD 559

Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
           K G    +S    +V + A+ G  ++A      M    D I W +L+  C
Sbjct: 560 KHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSAC 609



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 140/520 (26%), Positives = 234/520 (45%), Gaps = 99/520 (19%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  L  +   G+ + A  +FE+M +R   +WN M++  A+ GR+  A  LF   P +   
Sbjct: 201 NSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIV 260

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
           +W+++I GY+  GL+ +A   F +M       P ++T+ +VL  C+  G++  G+Q H Y
Sbjct: 261 SWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAY 320

Query: 159 AIKTCF---------------------------------DLNAFVVTGLVDMYAKCKCIF 185
            +++                                   DLN    T L++ Y K   + 
Sbjct: 321 ILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMK 380

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A  +F +  + ++ VAWT MI GY QNG+  +A+E FR M   G E N +T  ++L+ C
Sbjct: 381 HAREMFDVMSN-RDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVC 439

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE-VSW 304
           A+++  ++G Q+H   + S  E +  V ++++ MYA+ G L  ARR+ +      E V+W
Sbjct: 440 ASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTW 499

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
            SMIV  A+ G  ++A+ LF++M    +K D  T+  VL                S    
Sbjct: 500 TSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVL----------------SACTH 543

Query: 365 TGF--EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-----DVISWTSLITGCAYHGS 417
            GF  EG ++                     F  +QDK     ++  +  ++   A  G 
Sbjct: 544 VGFVDEGKRY---------------------FQQLQDKHGIVPEMSHYACMVDLLARAGL 582

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSAC-----AELTVLEFGQQVHAVFLKSGGCSSL 472
           + EA ++   M +    PD +   S+LSAC     A+L  L   + +      SG  S+L
Sbjct: 583 FSEAQEFIQQMPVE---PDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSAL 639

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDV-----ITWT 507
           S       VY+ CG  NDA +++     + V      +WT
Sbjct: 640 SN------VYSACGRWNDAAKIWKRRKDKSVKKETGFSWT 673


>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
 gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
          Length = 695

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 272/699 (38%), Positives = 404/699 (57%), Gaps = 48/699 (6%)

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD----LNAFVV 171
           +A  L   M L  ++P+   + N  RL +L    + GE  H    +  FD     + F  
Sbjct: 40  QAKRLKSHMHLHLFKPNDTFIHN--RLLNLYA--KSGEISHA---RKLFDEMTQRDNFSW 92

Query: 172 TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV 231
             ++ +YAK   + +   +F   P  ++ V++ T+I+G++ NG G  A+  F  M+ EG+
Sbjct: 93  NAMLSLYAKSGLVEDLRVIFDNMP-SRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGL 151

Query: 232 ESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR 291
           +  ++T  S+L AC  +     G Q+HG I+      NV+V +AL D+YA+CG++D ARR
Sbjct: 152 KPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARR 211

Query: 292 LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID 351
           L +   I N V+WN MI G+ +    ++ + LF +M   ++K D  T  SVL        
Sbjct: 212 LFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGA------ 265

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
                                        Y + G +D A  VF  +++KD + WT +I G
Sbjct: 266 -----------------------------YIQAGYIDEARKVFGEIREKDEVCWTIMIVG 296

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
           CA +G  E+AL  FS+M +    PD   +SS++S+CA+L  L  GQ VH      G    
Sbjct: 297 CAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDD 356

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
           L V ++LV +Y KCG   DA  +F +M TR+V++W ++I G A NG+  EAL  Y+ ML 
Sbjct: 357 LLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLE 416

Query: 532 RGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLI 591
              KPD +TFVG+L AC HAGL E  + YF SM   +G++P PDHYACM++L GRSG + 
Sbjct: 417 ENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMD 476

Query: 592 EAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYS 651
           +A  L+  M  EP++ +W  +LS C + GD++ GE AA  L EL P NA+PY+ LSNMY+
Sbjct: 477 KAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIMLSNMYA 536

Query: 652 TAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIML 711
             G+W+D A +R LMKS+ ++K    SW+E +++VH F+++DR HP    I+ +++ ++ 
Sbjct: 537 ARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQLNRLIR 596

Query: 712 LIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQG-APIRIFKNLRVCG 770
            ++EAG+ P+ N  LH+  E+ K   + YHSEKLA+A+GL+  P G  PIRI KN+R C 
Sbjct: 597 KLQEAGFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGLIKKPHGVTPIRIIKNIRTCA 656

Query: 771 DCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           DCH  MK++S +  R +ILRDSNRFHHF  G CSC DYW
Sbjct: 657 DCHIFMKFVSNITRRPVILRDSNRFHHFVEGKCSCKDYW 695



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 150/495 (30%), Positives = 244/495 (49%), Gaps = 43/495 (8%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           NR L  ++ SGEI  A +LF++M+ RD F+WN M++ YA SG + + + +F+  P ++  
Sbjct: 62  NRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSV 121

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           +++++I G++  G    A  +F +MQ EG +P++YT  +VL  C+    L+RG+Q HG  
Sbjct: 122 SYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRI 181

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           I      N FV   L D+YA+C  I +A  LF      +N V W  MI+GY +N    K 
Sbjct: 182 IICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVI-RNVVTWNLMISGYLKNRQPEKC 240

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           I+ F +M+V  ++ +Q T  S+L A                                   
Sbjct: 241 IDLFHEMQVSNLKPDQVTASSVLGA----------------------------------- 265

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           Y + G +D AR++       +EV W  MIVG A+ G  ++AL LF +M   + + D +T 
Sbjct: 266 YIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTI 325

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
            SV++  A    L + + VH      G      V++AL+DMY K G    A+ +F+ MQ 
Sbjct: 326 SSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQT 385

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           ++V+SW S+I G A +G   EAL  + +M    + PD V    +LSAC    ++E G++ 
Sbjct: 386 RNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEY 445

Query: 460 HAVFLKSGGCSSLSVDNS-LVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNG 517
                   G        + +V ++ + G ++ A  +  SM    + + WT ++  C   G
Sbjct: 446 FCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKG 505

Query: 518 KGKEALQFYDQMLAR 532
             K     + +M AR
Sbjct: 506 DIK-----HGEMAAR 515



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 163/361 (45%), Gaps = 63/361 (17%)

Query: 9   LNFSLRCRSKIIGPARYTH-NVGNSVKPASDLNR---------------------ALVD- 45
           L   LR + + + P  YTH +V N+     DL R                     AL D 
Sbjct: 140 LGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDL 199

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIA------------------------------ 75
           ++  GEID+A +LF++M  R+  TWN MI+                              
Sbjct: 200 YARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTA 259

Query: 76  -----AYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
                AY  +G + EA+K+F E   K+   W+ +I G +  G + +A  LF +M LE  R
Sbjct: 260 SSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENAR 319

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  YT+ +V+  C+    L  G+  HG A     + +  V + LVDMY KC    +A  +
Sbjct: 320 PDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTI 379

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F      +N V+W +MI GY+ NG   +A+  + +M  E ++ +  TF  +L+AC     
Sbjct: 380 FSTM-QTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGL 438

Query: 251 RDFGAQVHGCILSS--GFEANVYVQSALIDMYAKCGDLDSARRLL-EYSEIDNEVSWNSM 307
            + G + + C +S   G E      + +++++ + G +D A  L+   S+  N + W ++
Sbjct: 439 VEEGKE-YFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTV 497

Query: 308 I 308
           +
Sbjct: 498 L 498



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 106/262 (40%), Gaps = 51/262 (19%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G+ F    + D    + ++  Y   G  R+A  +F+    +N  +W+S+I GY+  G D+
Sbjct: 346 GKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDL 405

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  L+  M  E  +P   T   VL  C   GL++ G+++                    
Sbjct: 406 EALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYF------------------- 446

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
                  C    ++  +  PD      +  M+  + ++G+  KA++    M     E N 
Sbjct: 447 -------CSMSDQHGLEPTPD-----HYACMVNLFGRSGHMDKAVDLISSM---SQEPNS 491

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILS-SGFEANVYVQSALIDMYAKCG---DLDSARR 291
             + ++L+ C        G     C++  + F A  Y+   L +MYA  G   D+ S R 
Sbjct: 492 LIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIM--LSNMYAARGRWKDVASIRS 549

Query: 292 LLE-----------YSEIDNEV 302
           L++           + EIDNEV
Sbjct: 550 LMKSKHVKKFSAYSWIEIDNEV 571


>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
          Length = 720

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 279/724 (38%), Positives = 415/724 (57%), Gaps = 8/724 (1%)

Query: 90  FNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLL 149
           F+E   +    W+ L+   +  G    +  LF +M   G     YT   V +  S    +
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60

Query: 150 QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
             GEQ HG+ +K+ F     V   LV  Y K + +  A  +F    + ++ ++W ++I G
Sbjct: 61  HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE-RDVISWNSIING 119

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
           Y  NG   K +  F  M V G+E +  T  S+   CA       G  VH   + + F   
Sbjct: 120 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 179

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA 329
               + L+DMY+KCGDLDSA+ +       + VS+ SMI G+AR+G   EA+ LF++M  
Sbjct: 180 DRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 239

Query: 330 RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDC 389
             I  D +T  +VLNC A    L+  K VH  I +       FV+NAL+DMYAK G++  
Sbjct: 240 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 299

Query: 390 AFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS----DMRISGICPDHVVVSSILS 445
           A +VF+ M+ KD+ISW ++I G + +    EAL  F+    + R S   PD   V+ +L 
Sbjct: 300 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFS---PDERTVACVLP 356

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
           ACA L+  + G+++H   +++G  S   V NSLV +YAKCG +  A+ +FD + ++D+++
Sbjct: 357 ACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVS 416

Query: 506 WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMD 565
           WT +I G   +G GKEA+  ++QM   G + D I+FV LL+ACSH+GL +    +F  M 
Sbjct: 417 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 476

Query: 566 KVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELG 625
               I+P  +HYAC++D+L R+G LI+A   ++ M   PDAT+W ALL  CR+H D++L 
Sbjct: 477 HECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLA 536

Query: 626 ERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQ 685
           E+ A  +FELEP N   YV ++N+Y+ A KWE   R+RK +  RG+RK PGCSW+E   +
Sbjct: 537 EKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGR 596

Query: 686 VHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKL 745
           V+IF++ D  +P   +I + + ++   + E GY P   +AL + EE  KE  L  HSEKL
Sbjct: 597 VNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKL 656

Query: 746 AVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSC 805
           A+A G+++   G  IR+ KNLRVCGDCH   K++S +  R I+LRDSNRFH FK G+CSC
Sbjct: 657 AMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSC 716

Query: 806 GDYW 809
             +W
Sbjct: 717 RGFW 720



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 137/447 (30%), Positives = 239/447 (53%), Gaps = 6/447 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N+++A Y  + R+  A+K+F+E   ++  +W+S+I GY + GL  +   +F QM + G  
Sbjct: 83  NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 142

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
               T+ +V   C+   L+  G   H   +K CF         L+DMY+KC  +  A+ +
Sbjct: 143 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 202

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F+   D ++ V++T+MI GY++ G   +A++ F +M  EG+  + +T  ++L  CA    
Sbjct: 203 FREMSD-RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL 261

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            D G +VH  I  +    +++V +AL+DMYAKCG +  A  +     + + +SWN++I G
Sbjct: 262 LDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGG 321

Query: 311 FARQGFHKEALSLFK-KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           +++  +  EALSLF   +  +    D+ T   VL   AS    +  + +H  I++ G+  
Sbjct: 322 YSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS 381

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
            + V N+L+DMYAK G L  A M+F+ +  KD++SWT +I G   HG  +EA+  F+ MR
Sbjct: 382 DRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMR 441

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLVLVYAKCGC 487
            +GI  D +   S+L AC+   +++ G +   +          +V++   +V + A+ G 
Sbjct: 442 QAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP-TVEHYACIVDMLARTGD 500

Query: 488 INDANRVFDSMHT-RDVITWTALIMGC 513
           +  A R  ++M    D   W AL+ GC
Sbjct: 501 LIKAYRFIENMPIPPDATIWGALLCGC 527



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/362 (33%), Positives = 192/362 (53%), Gaps = 32/362 (8%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           NT++  Y+  G L  AK +F E   ++  +++S+I GY+  GL  EA +LF +M+ EG  
Sbjct: 184 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 243

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  YT+  VL  C+   LL  G++ H +  +     + FV   L+DMYAKC  + EAE +
Sbjct: 244 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 303

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACAAVS 249
           F      K+ ++W T+I GYS+N Y  +A+  F  +  E     ++ T   +L ACA++S
Sbjct: 304 FSEMRV-KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLS 362

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
           A D G ++HG I+ +G+ ++ +V ++L+DMYAKCG L  A  L +     + VSW  MI 
Sbjct: 363 AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIA 422

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           G+   GF KEA++LF +M    I+ D+ ++ S+L   +           HS +V    EG
Sbjct: 423 GYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACS-----------HSGLVD---EG 468

Query: 370 YKFVN---------------NALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCA 413
           ++F N                 ++DM A+ G+L  A+  + N+    D   W +L+ GC 
Sbjct: 469 WRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCR 528

Query: 414 YH 415
            H
Sbjct: 529 IH 530



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 138/270 (51%), Gaps = 16/270 (5%)

Query: 52  IDEAGQLFEKMSDRD----GFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYG 107
           +DE  ++ E + + D     F  N ++  YA  G ++EA+ +F+E   K+  +W+++I G
Sbjct: 262 LDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGG 321

Query: 108 YSNYGLDIEAFELF-WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDL 166
           YS      EA  LF   ++ + + P + T+  VL  C+      +G + HGY ++  +  
Sbjct: 322 YSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS 381

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
           +  V   LVDMYAKC  +  A  LF      K+ V+WT MI GY  +G+G +AI  F  M
Sbjct: 382 DRHVANSLVDMYAKCGALLLAHMLFDDIAS-KDLVSWTVMIAGYGMHGFGKEAIALFNQM 440

Query: 227 RVEGVESNQFTFPSILTACAAVSARD-----FGAQVHGCILSSGFEANVYVQSALIDMYA 281
           R  G+E+++ +F S+L AC+     D     F    H C +    E  V   + ++DM A
Sbjct: 441 RQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI----EPTVEHYACIVDMLA 496

Query: 282 KCGDLDSARRLLEYSEIDNEVS-WNSMIVG 310
           + GDL  A R +E   I  + + W +++ G
Sbjct: 497 RTGDLIKAYRFIENMPIPPDATIWGALLCG 526



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 64/170 (37%), Gaps = 33/170 (19%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           +LVD ++  G +  A  LF+ ++ +D  +W  MIA Y   G  +EA  LFN         
Sbjct: 388 SLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFN--------- 438

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
                                 QM+  G    + +  ++L  CS  GL+  G +F     
Sbjct: 439 ----------------------QMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 476

Query: 161 KTC-FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
             C  +        +VDM A+   + +A    +  P   +   W  ++ G
Sbjct: 477 HECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCG 526


>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2261; Flags: Precursor
 gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 285/769 (37%), Positives = 440/769 (57%), Gaps = 19/769 (2%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF---KNFFTWSSLIYGYSNYG 112
            +L E   + D   +N++I+ Y+ SG   +A+ +F        ++  +WS+++  Y N G
Sbjct: 86  ARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNG 145

Query: 113 LDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC-FDLNAFVV 171
            +++A ++F +    G  P+ Y    V+R CS    +  G    G+ +KT  F+ +  V 
Sbjct: 146 RELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVG 205

Query: 172 TGLVDMYAKCKCIFEAEYLFKMFPDGK--NHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
             L+DM+ K +  FE  Y  K+F      N V WT MIT   Q G+  +AI  F DM + 
Sbjct: 206 CSLIDMFVKGENSFENAY--KVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLS 263

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC---GDL 286
           G ES++FT  S+ +ACA +     G Q+H   + SG   +V  + +L+DMYAKC   G +
Sbjct: 264 GFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSV 321

Query: 287 DSARRLLEYSEIDNEVSWNSMIVGFARQ-GFHKEALSLFKKMHAR-DIKIDDFTYPSVLN 344
           D  R++ +  E  + +SW ++I G+ +      EA++LF +M  +  ++ + FT+ S   
Sbjct: 322 DDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFK 381

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
              +  D    K V     K G      V N++I M+ K   ++ A   F  + +K+++S
Sbjct: 382 ACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVS 441

Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
           + + + G   + ++E+A K  S++    +       +S+LS  A +  +  G+Q+H+  +
Sbjct: 442 YNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV 501

Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ 524
           K G   +  V N+L+ +Y+KCG I+ A+RVF+ M  R+VI+WT++I G A++G     L+
Sbjct: 502 KLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLE 561

Query: 525 FYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLL 584
            ++QM+  G KP+ +T+V +L ACSH GL      +F SM + + IKP  +HYACM+DLL
Sbjct: 562 TFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLL 621

Query: 585 GRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYV 644
            R+G L +A   ++ M  + D  VW+  L ACRVH + ELG+ AA  + EL+P     Y+
Sbjct: 622 CRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYI 681

Query: 645 QLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYS 704
           QLSN+Y+ AGKWE++  +R+ MK R + KE GCSW+E   ++H F   D  HP    IY 
Sbjct: 682 QLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYD 741

Query: 705 KIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIG----LAYHSEKLAVAFGLLTLPQGAPI 760
           ++D ++  IK  GYVPD +  LH +EEE  E      L  HSEK+AVAFGL++  +  P+
Sbjct: 742 ELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPV 801

Query: 761 RIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           R+FKNLRVCGDCH AMKYIS V  R I+LRD NRFHHFK G CSC DYW
Sbjct: 802 RVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 148/480 (30%), Positives = 237/480 (49%), Gaps = 41/480 (8%)

Query: 42  ALVDFSNSGE--IDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           +L+D    GE   + A ++F+KMS+ +  TW  MI      G  REA + F         
Sbjct: 207 SLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFF--------- 257

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
                        LD         M L G+   ++TL +V   C+    L  G+Q H +A
Sbjct: 258 -------------LD---------MVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWA 295

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNH--VAWTTMITGYSQN-GYG 216
           I++   L   V   LVDMYAKC      +   K+F   ++H  ++WT +ITGY +N    
Sbjct: 296 IRS--GLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLA 353

Query: 217 FKAIECFRDMRVEG-VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSA 275
            +AI  F +M  +G VE N FTF S   AC  +S    G QV G     G  +N  V ++
Sbjct: 354 TEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANS 413

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           +I M+ K   ++ A+R  E     N VS+N+ + G  R    ++A  L  ++  R++ + 
Sbjct: 414 VISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVS 473

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
            FT+ S+L+  A+   +   + +HS +VK G    + V NALI MY+K G++D A  VFN
Sbjct: 474 AFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFN 533

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
            M++++VISWTS+ITG A HG     L+ F+ M   G+ P+ V   +ILSAC+ + ++  
Sbjct: 534 FMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSE 593

Query: 456 G-QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
           G +  ++++        +     +V +  + G + DA    ++M  + DV+ W   +  C
Sbjct: 594 GWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGAC 653



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 142/505 (28%), Positives = 242/505 (47%), Gaps = 61/505 (12%)

Query: 219 AIECFRDMRVEGVES-NQFTFPSILTACAAVSARDF--GAQVHGCILSSGFEANVYVQSA 275
           A+     M  +G+   +  TF S+L +C  + ARDF  G  VH  ++    E +  + ++
Sbjct: 45  AVSALDLMARDGIRPMDSVTFSSLLKSC--IRARDFRLGKLVHARLIEFDIEPDSVLYNS 102

Query: 276 LIDMYAKCGDLDSARRLLEYSE---IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI 332
           LI +Y+K GD   A  + E        + VSW++M+  +   G   +A+ +F +     +
Sbjct: 103 LISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL 162

Query: 333 KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG-FEGYKFVNNALIDMYAK-QGNLDCA 390
             +D+ Y +V+   +++  +   +     ++KTG FE    V  +LIDM+ K + + + A
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENA 222

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
           + VF+ M + +V++WT +IT C   G   EA+++F DM +SG   D   +SS+ SACAEL
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL 282

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC---GCINDANRVFDSMHTRDVITWT 507
             L  G+Q+H+  ++SG      V+ SLV +YAKC   G ++D  +VFD M    V++WT
Sbjct: 283 ENLSLGKQLHSWAIRSGLVD--DVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWT 340

Query: 508 ALIMGCAQN-GKGKEALQFYDQMLARG-TKPDYITFVGLLFACSH--------------- 550
           ALI G  +N     EA+  + +M+ +G  +P++ TF     AC +               
Sbjct: 341 ALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF 400

Query: 551 -AGLA-------------------ENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKL 590
             GLA                   E+A+  FES+ +   +      Y   +D   R+   
Sbjct: 401 KRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVS-----YNTFLDGTCRNLNF 455

Query: 591 IEAKALLDQMVGEP---DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ-L 646
            +A  LL ++        A  + +LLS     G +  GE+  + + +L      P    L
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515

Query: 647 SNMYSTAGKWEDAARVRKLMKSRGI 671
            +MYS  G  + A+RV   M++R +
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNV 540



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 92/378 (24%), Positives = 170/378 (44%), Gaps = 31/378 (8%)

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
           +D  T+ S+L       D    K VH+ +++   E    + N+LI +Y+K G+   A  V
Sbjct: 60  MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119

Query: 394 FNLMQ---DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
           F  M+    +DV+SW++++     +G   +A+K F +    G+ P+    ++++ AC+  
Sbjct: 120 FETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNS 179

Query: 451 TVLEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKC-GCINDANRVFDSMHTRDVITWTA 508
             +  G+      +K+G   S + V  SL+ ++ K      +A +VFD M   +V+TWT 
Sbjct: 180 DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTL 239

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
           +I  C Q G  +EA++F+  M+  G + D  T   +  AC     AE            +
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC-----AELENLSLGKQLHSW 294

Query: 569 GIKPG-PDHYAC-MIDLLGR---SGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
            I+ G  D   C ++D+  +    G + + + + D+M  +     W AL++    + +L 
Sbjct: 295 AIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRM-EDHSVMSWTALITGYMKNCNLA 353

Query: 624 LGERAANNLF-------ELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPG 676
                A NLF        +EP     +   S+ +   G   D  RV K +  +  ++   
Sbjct: 354 T---EAINLFSEMITQGHVEP----NHFTFSSAFKACGNLSD-PRVGKQVLGQAFKRGLA 405

Query: 677 CSWVETNSQVHIFISEDR 694
            +    NS + +F+  DR
Sbjct: 406 SNSSVANSVISMFVKSDR 423


>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
 gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
          Length = 1067

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 293/802 (36%), Positives = 463/802 (57%), Gaps = 29/802 (3%)

Query: 29   VGNSVKPAS----DLNRALVDFSNSGEIDEAGQLFEKMSDR--------DGFTWNTMIAA 76
            +G+ +KP       L  A    +NSG +     L E++  R        D +  + +++ 
Sbjct: 274  MGDGLKPNEYTFGSLISATCSLANSGLV-----LLEQLLTRVEKSGFLHDLYVGSALVSG 328

Query: 77   YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQY- 134
            +A +G +  AK +F +  ++N  + + LI G        EA ELF +M+      P+ Y 
Sbjct: 329  FAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYM 388

Query: 135  -TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV--TGLVDMYAKCKCIFEAEYLF 191
              L        L+   ++G + H + I++   LNA +    GL++MYAKC  I +A  +F
Sbjct: 389  IILTAFPEFHVLENGKRKGSEVHAFLIRSGL-LNAQIAIGNGLINMYAKCGAINDACVVF 447

Query: 192  KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
            ++  D K+ V W +MITG  QN    +A++ F++MR   +  + FT  S L++CA++   
Sbjct: 448  RLM-DNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWI 506

Query: 252  DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
              G Q+H   L  G + +V V +AL+ +Y +CG +   ++        + VSWNS+I   
Sbjct: 507  SVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGAL 566

Query: 312  A-RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
            A  +    EA+  F  M       +  T+ ++L   +S       K +H+L++K      
Sbjct: 567  ADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAAD 626

Query: 371  KFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGSYEEALKYFSDMR 429
              + NAL+  Y K G++     +F+ M D+ D +SW S+I+G  ++    +A+     M 
Sbjct: 627  TAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMM 686

Query: 430  ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
              G   D    +++LSACA +  LE G +VH   +++   S + + ++LV +YAKCG I+
Sbjct: 687  QKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRID 746

Query: 490  DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
             A+R F+ M  R++ +W ++I G A++G G ++L  + QM  +G  PD++TFVG+L ACS
Sbjct: 747  YASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACS 806

Query: 550  HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
            HAGL      +F+SM ++YG+ P  +H++CM+DLLGR G+L + +  L+QM  +P+  +W
Sbjct: 807  HAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIW 866

Query: 610  KALLSA-CRVHG-DLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
            + +L A CR +G +  LG RAA  L E+EP NA+ Y+ LSNMY++ GKW+D A+ R  M+
Sbjct: 867  RTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVAMR 926

Query: 668  SRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALH 727
               ++KE GCSWV     VH+F++ D+ HP +  IY K+ E+   ++ AGY+P+  FAL+
Sbjct: 927  KAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLIYEKLKELNGKMRLAGYIPETRFALY 986

Query: 728  NVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHI 787
            ++E E KE  L+YHSEK+AVAF +LT P   PIRI KNLRVCGDCH+A KYIS +  R I
Sbjct: 987  DLEGESKEELLSYHSEKIAVAF-VLTRPSKMPIRILKNLRVCGDCHSAFKYISQIVERQI 1045

Query: 788  ILRDSNRFHHFKAGNCSCGDYW 809
            +LRDSNRFHHF+ G CSCGD+W
Sbjct: 1046 VLRDSNRFHHFENGKCSCGDFW 1067



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 175/582 (30%), Positives = 295/582 (50%), Gaps = 21/582 (3%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
           QLF+     D F  NT+I  YA  G L   +K+F+E P +N  +WS LI GY+   +  E
Sbjct: 98  QLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNE 157

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL--LQRGEQFHGYAIKTCFDLNAFVVTGL 174
           A ELF +M  +G+ P+ Y   +V+R C   G   L+ G Q HG   KT +  +      L
Sbjct: 158 ACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVL 217

Query: 175 VDMYAKCKCIFEAEYLFKMFPD--GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE--- 229
           + MY     +   +Y  + F     +N V+  +MI+ Y Q G    A + F  M+ E   
Sbjct: 218 ISMYG--NALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMG 275

Query: 230 -GVESNQFTFPSILTACAAV--SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDL 286
            G++ N++TF S+++A  ++  S      Q+   +  SGF  ++YV SAL+  +AK G +
Sbjct: 276 DGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSI 335

Query: 287 DSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCF 346
             A+ + +     N VS N +I+G  RQ   +EA+ LF +M    ++++  +Y  +L  F
Sbjct: 336 GYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEM-KDSVELNPNSYMIILTAF 394

Query: 347 ASNIDLNNAK----SVHSLIVKTGFEGYKF-VNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
                L N K     VH+ ++++G    +  + N LI+MYAK G ++ A +VF LM +KD
Sbjct: 395 PEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKD 454

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
            ++W S+ITG   +  + EA+K F +MR + + P +  + S LS+CA L  +  G+Q+H 
Sbjct: 455 SVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHC 514

Query: 462 VFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGK- 520
             LK G    +SV N+L+ +Y +CG + +  + F  M   D ++W +LI   A +     
Sbjct: 515 EGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSML 574

Query: 521 EALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACM 580
           EA++ +  M+  G  P+ +TF+ +L A S   L E  +     + K   +         +
Sbjct: 575 EAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLK-RNVAADTAIENAL 633

Query: 581 IDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDL 622
           +   G+ G +   + +  +M    D   W +++S   +H +L
Sbjct: 634 LACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISG-YIHNEL 674



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 141/283 (49%), Gaps = 9/283 (3%)

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           ++H  +  +GF  ++++ + LI++YA+ GDL S R++ +   + N VSW+ +I G+ R  
Sbjct: 94  ELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNR 153

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS--NIDLNNAKSVHSLIVKTGFEGYKFV 373
              EA  LF+KM +     + + + SV+          L     +H L+ KT +      
Sbjct: 154 MPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTA 213

Query: 374 NNALIDMYAKQ-GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS- 431
           +N LI MY    G +D A   F+ +  ++++S  S+I+     G    A   FS M+   
Sbjct: 214 SNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEV 273

Query: 432 ---GICPDHVVVSSILSACAEL--TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
              G+ P+     S++SA   L  + L   +Q+     KSG    L V ++LV  +AK G
Sbjct: 274 MGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAG 333

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
            I  A  +F  M  R+V++   LI+G  +  +G+EA++ + +M
Sbjct: 334 SIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEM 376



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 106/206 (51%), Gaps = 8/206 (3%)

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
           +A+ +H  + K GF    F+ N LI++YA+ G+L     VF+ M  ++++SW+ LI+G  
Sbjct: 91  DAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYT 150

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV--LEFGQQVHAVFLKSGGCSS 471
            +    EA + F  M   G  P+H    S++ AC E     L+FG Q+H +  K+   + 
Sbjct: 151 RNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVND 210

Query: 472 LSVDNSLVLVYAKC-GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM- 529
           ++  N L+ +Y    G ++ A R FDS+  R++++  ++I    Q G    A   +  M 
Sbjct: 211 VTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQ 270

Query: 530 ---LARGTKPDYITFVGLLFA-CSHA 551
              +  G KP+  TF  L+ A CS A
Sbjct: 271 KEVMGDGLKPNEYTFGSLISATCSLA 296



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 55/97 (56%)

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
            +++H    K+G  + L + N+L+ +YA+ G +    +VFD M  R++++W+ LI G  +
Sbjct: 92  AEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTR 151

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
           N    EA + + +M++ G  P++  F  ++ AC   G
Sbjct: 152 NRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECG 188


>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
 gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
 gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 790

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 295/772 (38%), Positives = 419/772 (54%), Gaps = 102/772 (13%)

Query: 140 LRLCS--LKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF--P 195
           LRLC    +  LQ     HG  I   F   A ++  L+D+Y K   +  A  LF     P
Sbjct: 19  LRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEP 78

Query: 196 DG------------------------------KNHVAWTTMITGYSQNGYGFKAIECFRD 225
           D                               ++ V +  MITG+S N  G+ AI  F  
Sbjct: 79  DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFG-AQVHGCILSSGFEANVYVQSALIDMYAKCG 284
           M+ EG + + FTF S+L   A V+  +    Q H   L SG      V +AL+ +Y+KC 
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198

Query: 285 D----LDSARRLLEYSEIDNEVSW--------------------------------NSMI 308
                L SAR++ +     +E SW                                N+MI
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMI 258

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
            G+  +GF++EAL + ++M +  I++D+FTYPSV+   A+   L   K VH+ +++    
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF 318

Query: 369 GYKFVN------------------------------NALIDMYAKQGNLDCAFMVFNLMQ 398
            + F N                              NAL+  Y   G++  A ++F  M+
Sbjct: 319 SFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK 378

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
           +K+++SW  +I+G A +G  EE LK FS M+  G  P     S  + +CA L     GQQ
Sbjct: 379 EKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQ 438

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK 518
            HA  LK G  SSLS  N+L+ +YAKCG + +A +VF +M   D ++W ALI    Q+G 
Sbjct: 439 YHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGH 498

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA 578
           G EA+  Y++ML +G +PD IT + +L ACSHAGL +  R YF+SM+ VY I PG DHYA
Sbjct: 499 GAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYA 558

Query: 579 CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM 638
            +IDLL RSGK  +A+++++ +  +P A +W+ALLS CRVHG++ELG  AA+ LF L P 
Sbjct: 559 RLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPE 618

Query: 639 NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPL 698
           +   Y+ LSNM++  G+WE+ ARVRKLM+ RG++KE  CSW+E  +QVH F+ +D  HP 
Sbjct: 619 HDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPE 678

Query: 699 RTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEG-KEIGLAYHSEKLAVAFGLLTLPQG 757
              +Y  + ++   ++  GYVPD +F LH+VE +G KE  L  HSEK+AVAFGL+ LP G
Sbjct: 679 AEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPG 738

Query: 758 APIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             IRIFKNLR CGDCH   +++S V  R IILRD  RFHHF+ G CSCG++W
Sbjct: 739 TTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 166/610 (27%), Positives = 276/610 (45%), Gaps = 89/610 (14%)

Query: 9   LNFSLRCRSKIIGPARYTHNVGNSV----KP-ASDLNRALVDFSNSGEIDEAGQLFEKMS 63
           L   L  R   +  AR  H  GN +    +P A  LNR +  +  S E++ A QLF+++S
Sbjct: 19  LRLCLPLRRTSLQLARAVH--GNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEIS 76

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETP--FKNFFTWSSLIYGYSNYGLDIEAFELF 121
           + D     TM++ Y  SG +  A+ +F + P   ++   ++++I G+S+      A  LF
Sbjct: 77  EPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLF 136

Query: 122 WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG-EQFHGYAIKTCFDLNAFVVTGLVDMYAK 180
            +M+ EG++P  +T  +VL   +L    ++   QFH  A+K+       V   LV +Y+K
Sbjct: 137 CKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSK 196

Query: 181 C----KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGY--------------------- 215
           C      +  A  +F    + K+  +WTTM+TGY +NGY                     
Sbjct: 197 CASSPSLLHSARKVFDEILE-KDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYN 255

Query: 216 ---------GF--KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS 264
                    GF  +A+E  R M   G+E ++FT+PS++ ACA       G QVH  +L  
Sbjct: 256 AMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR 315

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS------------------ 306
             + + +  ++L+ +Y KCG  D AR + E     + VSWN+                  
Sbjct: 316 E-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIF 374

Query: 307 -------------MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
                        MI G A  GF +E L LF  M     +  D+ +   +   A      
Sbjct: 375 KEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYC 434

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
           N +  H+ ++K GF+      NALI MYAK G ++ A  VF  M   D +SW +LI    
Sbjct: 435 NGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALG 494

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ----VHAVFLKSGGC 469
            HG   EA+  + +M   GI PD + + ++L+AC+   +++ G++    +  V+    G 
Sbjct: 495 QHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGA 554

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVI-TWTALIMGCAQNGKGKEALQFYDQ 528
              +    L+ +  + G  +DA  V +S+  +     W AL+ GC  +G  +  +   D+
Sbjct: 555 DHYA---RLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADK 611

Query: 529 MLARGTKPDY 538
           +   G  P++
Sbjct: 612 LF--GLIPEH 619



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 183/416 (43%), Gaps = 91/416 (21%)

Query: 341 SVLNCFASNI---------DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
           ++ N +A+N+          L  A++VH  I+  GF+    + N LID+Y K   L+ A 
Sbjct: 10  AIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYAR 69

Query: 392 MVFNLMQDKDVISWTSLITG-CAY------HGSYEE------------------------ 420
            +F+ + + D I+ T++++G CA        G +E+                        
Sbjct: 70  QLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDG 129

Query: 421 --ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ--QVHAVFLKSGGCSSLSVDN 476
             A+  F  M+  G  PD+   +S+L+  A L   +  Q  Q HA  LKSG     SV N
Sbjct: 130 YSAINLFCKMKHEGFKPDNFTFASVLAGLA-LVADDEKQCVQFHAAALKSGAGYITSVSN 188

Query: 477 SLVLVYAKCGC----INDANRVFDSMHTRDVITWTALIMGCAQNG--------------- 517
           +LV VY+KC      ++ A +VFD +  +D  +WT ++ G  +NG               
Sbjct: 189 ALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDN 248

Query: 518 ---------------KG--KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWY 560
                          +G  +EAL+   +M++ G + D  T+  ++ AC+ AGL +  +  
Sbjct: 249 MKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQV 308

Query: 561 FESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
              + +        D+   ++ L  + GK  EA+A+ ++M  + D   W ALLS     G
Sbjct: 309 HAYVLRREDFSFHFDN--SLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYVSSG 365

Query: 621 DLELGERAANNLF-ELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEP 675
              +GE  A  +F E++  N + ++ + +  +  G  E+  ++   MK  G   EP
Sbjct: 366 --HIGE--AKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGF--EP 415


>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 269/745 (36%), Positives = 424/745 (56%), Gaps = 5/745 (0%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFK--NFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           F  N +IA Y   G L  A+ LF+    +  +  +W+S+I  +   G  +EA  LF +MQ
Sbjct: 181 FVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQ 240

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G   + YT    L+       ++ G   HG A+K+    + +V   L+ MYAKC  + 
Sbjct: 241 EVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRME 300

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +AE +F      +++V+W T+++G  QN     A+  FRDM+    + +Q +  +++ A 
Sbjct: 301 DAERVFASML-CRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAAS 359

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
                   G +VH   + +G ++N+ + + LIDMYAKC  +       E     + +SW 
Sbjct: 360 GRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWT 419

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           ++I G+A+   H EA++LF+K+  + + +D     SVL   +     N  + +H  + K 
Sbjct: 420 TIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKR 479

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
                  + NA++++Y + G+ D A   F  ++ KD++SWTS+IT C ++G   EAL+ F
Sbjct: 480 DLADI-MLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELF 538

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             ++ + I PD + + S LSA A L+ L+ G+++H   ++ G      + +SLV +YA C
Sbjct: 539 YSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACC 598

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G + ++ ++F S+  RD+I WT++I     +G G EA+  + +M      PD+ITF+ LL
Sbjct: 599 GTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALL 658

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
           +ACSH+GL    + +FE M   Y ++P P+HYACM+DLL RS  L EA   +  M  +P 
Sbjct: 659 YACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPS 718

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
           + VW ALL AC +H + ELGE AA  L + +  N+  Y  +SN+++  G+W D   VR  
Sbjct: 719 SEVWCALLGACHIHSNKELGELAAKELLQSDTKNSGKYALISNIFAADGRWNDVEEVRLR 778

Query: 666 MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIM-LLIKEAGYVPDMNF 724
           MK  G++K PGCSW+E ++++H F++ D+ HP   DIY K+ +   LL K+ GY+    F
Sbjct: 779 MKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLGKKGGYIAQTKF 838

Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
             HNV EE K   L  HSE+LA+ +GLL  P+G  IRI KNLR+C DCHT  K  S V  
Sbjct: 839 VFHNVSEEEKTQMLYRHSERLALGYGLLVTPKGTSIRITKNLRICDDCHTFFKIASEVSQ 898

Query: 785 RHIILRDSNRFHHFKAGNCSCGDYW 809
           R +++RD+NRFHHF+ G CSCGD+W
Sbjct: 899 RALVVRDANRFHHFERGLCSCGDFW 923



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 185/654 (28%), Positives = 317/654 (48%), Gaps = 41/654 (6%)

Query: 52  IDEAGQLFEKM--SDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS 109
           + +  QL  ++  S    F    ++  Y   G L++A K+F+E   +  FTW++++  + 
Sbjct: 62  LPQGQQLHARLLKSHLSAFLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFV 121

Query: 110 NYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAF 169
           + G  +EA EL+ +M++ G      T  +VL+ C   G  + G + HG A+K  F    F
Sbjct: 122 SSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVF 181

Query: 170 VVTGLVDMYAKCKCIFEAEYLFK-MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
           V   L+ MY KC  +  A  LF  +  + ++ V+W ++I+ +   G   +A+  FR M+ 
Sbjct: 182 VCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQE 241

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
            GV SN +TF + L      S    G  +HG  L S   A+VYV +ALI MYAKCG ++ 
Sbjct: 242 VGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMED 301

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
           A R+       + VSWN+++ G  +   +++AL+ F+ M     K D  +  +++     
Sbjct: 302 AERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGR 361

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
           + +L N K VH+  ++ G +    + N LIDMYAK   +      F  M +KD+ISWT++
Sbjct: 362 SGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTI 421

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
           I G A +  + EA+  F  +++ G+  D +++ S+L AC+ L    F +++H    K   
Sbjct: 422 IAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKR-D 480

Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
            + + + N++V VY + G  + A R F+S+ ++D+++WT++I  C  NG   EAL+ +  
Sbjct: 481 LADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYS 540

Query: 529 MLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP------DHYAC--- 579
           +     +PD I  +  L A ++    +  +     + +      GP      D YAC   
Sbjct: 541 LKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGT 600

Query: 580 ---------------------MIDLLGRSGKLIEAKALLDQMVGE---PDATVWKALLSA 615
                                MI+  G  G   EA AL  +M  E   PD   + ALL A
Sbjct: 601 VENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYA 660

Query: 616 CRVHGDLELGERAANNL---FELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
           C   G +  G+R    +   ++LEP     Y  + ++ S +   E+A +  + M
Sbjct: 661 CSHSGLMVEGKRFFEIMKYGYQLEPWPE-HYACMVDLLSRSNSLEEAYQFVRSM 713



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 144/413 (34%), Positives = 227/413 (54%), Gaps = 5/413 (1%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           +L LC     L +G+Q H   +K+   L+AF+ T L+ MY KC  + +A  +F    + +
Sbjct: 52  LLDLCVAVKALPQGQQLHARLLKS--HLSAFLATKLLHMYEKCGSLKDAVKVFDEMTE-R 108

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
               W  M+  +  +G   +AIE +++MRV GV  +  TFPS+L AC A+     GA++H
Sbjct: 109 TIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIH 168

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE--YSEIDNEVSWNSMIVGFARQGF 316
           G  +  GF   V+V +ALI MY KCGDL  AR L +    E ++ VSWNS+I     +G 
Sbjct: 169 GVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGK 228

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
             EALSLF++M    +  + +T+ + L        +     +H   +K+      +V NA
Sbjct: 229 CLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANA 288

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           LI MYAK G ++ A  VF  M  +D +SW +L++G   +  Y +AL YF DM+ S   PD
Sbjct: 289 LIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPD 348

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFD 496
            V V ++++A      L  G++VHA  +++G  S++ + N+L+ +YAKC C+      F+
Sbjct: 349 QVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFE 408

Query: 497 SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
            MH +D+I+WT +I G AQN    EA+  + ++  +G   D +    +L ACS
Sbjct: 409 CMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACS 461



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 121/477 (25%), Positives = 217/477 (45%), Gaps = 64/477 (13%)

Query: 21  GPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           G   + + + N +     +   L+D ++    +   G  FE M ++D  +W T+IA YA 
Sbjct: 368 GKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQ 427

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
                      NE                      +EA  LF ++Q++G       + +V
Sbjct: 428 -----------NEC--------------------HLEAINLFRKVQVKGMDVDPMMIGSV 456

Query: 140 LRLCSLKGLLQRG--EQFHGYAIKTCFDL-NAFVVTGLVDMYAKCKCIFEAEYLFKMFPD 196
           LR CS  GL  R    + HGY  K   DL +  +   +V++Y +   +   +Y  + F  
Sbjct: 457 LRACS--GLKSRNFIREIHGYVFKR--DLADIMLQNAIVNVYGE---VGHRDYARRAFES 509

Query: 197 --GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
              K+ V+WT+MIT    NG   +A+E F  ++   ++ +     S L+A A +S+   G
Sbjct: 510 IRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKG 569

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
            ++HG ++  GF     + S+L+DMYA CG ++++R++    +  + + W SMI      
Sbjct: 570 KEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMH 629

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
           G   EA++LFKKM   ++  D  T+ ++L  C  S + +   +     I+K G++   + 
Sbjct: 630 GCGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFE--IMKYGYQLEPWP 687

Query: 374 NN--ALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYE-------EALK 423
            +   ++D+ ++  +L+ A+     M  K     W +L+  C  H + E       E L+
Sbjct: 688 EHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQ 747

Query: 424 YFSDMRISGICPDHVVVSSILSACAELT-VLEFGQQVHAVFLKSG-GCSSLSVDNSL 478
             SD + SG    + ++S+I +A      V E   ++    LK   GCS + VDN +
Sbjct: 748 --SDTKNSG---KYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKI 799



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 88/178 (49%), Gaps = 8/178 (4%)

Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT 500
           S +L  C  +  L  GQQ+HA  LKS   + L+    L+ +Y KCG + DA +VFD M  
Sbjct: 50  SLLLDLCVAVKALPQGQQLHARLLKSHLSAFLA--TKLLHMYEKCGSLKDAVKVFDEMTE 107

Query: 501 RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWY 560
           R + TW A++     +GK  EA++ Y +M   G   D  TF  +L AC   G    +R  
Sbjct: 108 RTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALG---ESRLG 164

Query: 561 FESMDKVYGIKPGPDHYAC--MIDLLGRSGKLIEAKALLDQMVGEPDATV-WKALLSA 615
            E          G   + C  +I + G+ G L  A+ L D ++ E + TV W +++SA
Sbjct: 165 AEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISA 222


>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
          Length = 779

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 287/750 (38%), Positives = 426/750 (56%), Gaps = 6/750 (0%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           +D   W   +  +   G+L  A+++F+  P  +   +++LI  YS  G    A +L+  M
Sbjct: 31  KDNKEWQQELEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSM 90

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
                 P++YT   VL+ CS    L  G   H +A       + FV T L+D+Y +C   
Sbjct: 91  LYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARF 150

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILT 243
             A  +F   P  ++ VAW  M+ GY+ +G    AI    DM+  G +  N  T  S+L 
Sbjct: 151 GPAANVFAKMP-MRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLP 209

Query: 244 ACAAVSARDFGAQVHGCILSSGFEAN---VYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
             A   A   G  VH   L +  + N   V + +AL+DMYAKC  L  A R+     + N
Sbjct: 210 LLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRN 269

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIK-IDDFTYPSVLNCFASNIDLNNAKSVH 359
           EV+W+++I GF       EA +LFK M    +  +   +  S L   AS  DL     +H
Sbjct: 270 EVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLH 329

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
           +L+ K+G        N+L+ MYAK G ++ A M+F+ +  KD IS+ +L++G   +G  E
Sbjct: 330 ALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAE 389

Query: 420 EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
           EA   F  M+   + PD   + S++ AC+ L  L+ G+  H   +  G     S+ NSL+
Sbjct: 390 EAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLI 449

Query: 480 LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
            +YAKCG I+ + +VFD M  RD+++W  +I G   +G GKEA   +  M  +G +PD +
Sbjct: 450 DMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDV 509

Query: 540 TFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ 599
           TF+ L+ ACSH+GL    + +F++M   YGI P  +HY CM+DLL R G L EA   +  
Sbjct: 510 TFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQS 569

Query: 600 MVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDA 659
           M  + D  VW ALL ACR+H +++LG++ +  + +L P     +V LSN++S AG++++A
Sbjct: 570 MPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEA 629

Query: 660 ARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYV 719
           A VR + K +G +K PGCSW+E N  +H F+  D+ HP   DIY ++D I++ IK+ GY 
Sbjct: 630 AEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLGYQ 689

Query: 720 PDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYI 779
            D +F L ++EEE KE  L YHSEKLA+AFG+L+L +   I + KNLRVCGDCHTA+KY+
Sbjct: 690 ADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYM 749

Query: 780 SAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           + V  R II+RD+NRFHHFK G CSCGD+W
Sbjct: 750 TLVRNRTIIVRDANRFHHFKNGQCSCGDFW 779



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 41/172 (23%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           +L+D ++  G ID + Q+F+KM  RD  +WNTMIA Y                       
Sbjct: 447 SLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYG---------------------- 484

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF----- 155
                     +GL  EA  LF  M+ +G+ P   T   ++  CS  GL+  G+ +     
Sbjct: 485 ---------IHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMT 535

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
           H Y I     +  ++   +VD+ A+   + EA    +  P   +   W  ++
Sbjct: 536 HKYGILP--RMEHYIC--MVDLLARGGFLDEAYQFIQSMPLKADVRVWGALL 583


>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 270/640 (42%), Positives = 385/640 (60%), Gaps = 5/640 (0%)

Query: 174 LVDMYAKCKCIFE----AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
           L++M  +C   F       +LF       N   W TMI G   N     AIE +  MR E
Sbjct: 48  LLNMILRCSFDFSDTNYTRFLFHQIKQ-PNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSE 106

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
           G   N FTFP +L ACA +     G ++H  ++  GF+ +V+V+++L+ +YAKCG L+ A
Sbjct: 107 GFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDA 166

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
            ++ +     N VSW ++I G+   G  +EA+ +F+++   ++  D FT   VL+     
Sbjct: 167 HKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQL 226

Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
            DLN+ + +H  I++ G     FV  +L+DMYAK GN++ A  VF+ M +KD++SW ++I
Sbjct: 227 GDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMI 286

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
            G A +G  +EA+  F  M+   + PD   V  +LSACA L  LE G+ V  +  ++   
Sbjct: 287 QGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFL 346

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
            +  +  +L+ +YAKCG ++ A  VF  M  +D + W A+I G A NG  K +   + Q+
Sbjct: 347 YNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQV 406

Query: 530 LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGK 589
              G KPD  TF+GLL  C+HAGL +  R YF SM + + + P  +HY CM+DLLGR+G 
Sbjct: 407 EKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGL 466

Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNM 649
           L EA  L+  M  E +A VW ALL ACR+H D +L E A   L ELEP N+  YV LSN+
Sbjct: 467 LDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNI 526

Query: 650 YSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEI 709
           YS   KW++AA+VR  M  + I+K PGCSW+E +  VH F+  D+ HPL   IY+K+DE+
Sbjct: 527 YSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDEL 586

Query: 710 MLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVC 769
              +K AGYVP  +F L ++EEE KE  L  HSEKLA+AFGL++    A IR+ KNLRVC
Sbjct: 587 TKKMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNLRVC 646

Query: 770 GDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           GDCH A+K IS++  R I +RD+NRFH F+ G+CSC DYW
Sbjct: 647 GDCHMAIKLISSITGREITVRDNNRFHCFREGSCSCNDYW 686



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 235/450 (52%), Gaps = 3/450 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +  N ++    +       + LF++    N F W+++I G  +     +A E +  M+
Sbjct: 45  DNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMR 104

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            EG+ P+ +T   VL+ C+    LQ G + H   +K  FD + FV T LV +YAKC  + 
Sbjct: 105 SEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLE 164

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A  +F   PD KN V+WT +I+GY   G   +AI+ FR +    +  + FT   +L+AC
Sbjct: 165 DAHKVFDDIPD-KNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSAC 223

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
             +   + G  +H CI+  G   NV+V ++L+DMYAKCG+++ AR + +     + VSW 
Sbjct: 224 TQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWG 283

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +MI G+A  G  KEA+ LF +M   ++K D +T   VL+  A    L   + V  L+ + 
Sbjct: 284 AMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRN 343

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
            F     +  ALID+YAK G++  A+ VF  M++KD + W ++I+G A +G  + +   F
Sbjct: 344 EFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLF 403

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQ-VHAVFLKSGGCSSLSVDNSLVLVYAK 484
             +   GI PD      +L  C    +++ G++  ++++       S+     +V +  +
Sbjct: 404 GQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGR 463

Query: 485 CGCINDANRVFDSMHTR-DVITWTALIMGC 513
            G +++A+++  +M    + I W AL+  C
Sbjct: 464 AGLLDEAHQLIRNMPMEANAIVWGALLGAC 493



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 123/394 (31%), Positives = 202/394 (51%), Gaps = 19/394 (4%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D F   +++  YA  G L +A K+F++ P KN  +W+++I GY   G   EA ++F +
Sbjct: 144 DCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRR 203

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           +      P  +T+  VL  C+  G L  GE  H   ++     N FV T LVDMYAKC  
Sbjct: 204 LLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGN 263

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A  +F   P+ K+ V+W  MI GY+ NG   +AI+ F  M+ E V+ + +T   +L+
Sbjct: 264 MEKARSVFDGMPE-KDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLS 322

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           ACA + A + G  V G +  + F  N  + +ALID+YAKCG +  A  + +  +  + V 
Sbjct: 323 ACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVV 382

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLI 362
           WN++I G A  G+ K +  LF ++    IK D  T+  +L  C  + +     +  +S+ 
Sbjct: 383 WNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMY 442

Query: 363 ----VKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGS 417
               +    E Y      ++D+  + G LD A  ++ N+  + + I W +L+  C  H  
Sbjct: 443 RFFSLTPSIEHY----GCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRD 498

Query: 418 Y---EEALKYFSDMRI--SGICPDHVVVSSILSA 446
               E ALK   ++    SG   ++V++S+I SA
Sbjct: 499 TQLAELALKQLIELEPWNSG---NYVLLSNIYSA 529


>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
 gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
          Length = 903

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 285/772 (36%), Positives = 437/772 (56%), Gaps = 49/772 (6%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           + + G +  A  LFEKM +RD  +WN  IAA A SG L                      
Sbjct: 173 YGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGDL---------------------- 209

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                 G+   A ELF +MQLEG RP++ TL   L +C+    +++ +  H    ++  +
Sbjct: 210 ------GI---ALELFQRMQLEGVRPARITLVIALTVCAT---IRQAQAIHFIVRESGLE 257

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
               V T L   YA+   +++A+ +F    + ++ V+W  M+  Y+Q+G+  +A   F  
Sbjct: 258 QTLVVSTALASAYARLGHLYQAKEVFDRAAE-RDVVSWNAMLGAYAQHGHMSEAALLFAR 316

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M  EG+  ++ T  +  T C+++    FG  +HGC L  G + ++ + +AL+DMY +CG 
Sbjct: 317 MLHEGISPSKVTLVNASTGCSSLR---FGRMIHGCALEKGLDRDIVLGNALLDMYTRCGS 373

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
            + AR L +     N VSWN+MI G +++G  K A+ LF++M    +     TY ++L  
Sbjct: 374 PEEARHLFKRIPC-NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEA 432

Query: 346 FASNID----LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN--LMQD 399
            ASN +    +   + +HS IV  G+     +  A++ MYA  G +D A   F    M+D
Sbjct: 433 VASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMED 492

Query: 400 K-DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
           + DV+SW ++I+  + HG  + AL +F  M + G+ P+ +   ++L ACA    L  G+ 
Sbjct: 493 RHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEI 552

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT-RDVITWTALIMGCAQNG 517
           VH     SG  S+L V  +L  +Y +CG +  A  +F+ +   RDV+ + A+I   +QNG
Sbjct: 553 VHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNG 612

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY 577
              EAL+ + +M   G++PD  +FV +L ACSH GLA+     F SM + YGI P  DHY
Sbjct: 613 LAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHY 672

Query: 578 ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEP 637
           AC +D+LGR+G L +A+ L+  M  +P   VWK LL ACR + D++ G  A + + EL+P
Sbjct: 673 ACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDP 732

Query: 638 MNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHP 697
            +   YV LSN+ + AGKW++AA VR  M+SRG+RKE G SW+E  S+VH F++ DR HP
Sbjct: 733 GDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKSRVHEFVAGDRSHP 792

Query: 698 LRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQG 757
              +IY +++ +   I+E GYVPD    L  V+E  KE  L  HSE+LA+A G+++    
Sbjct: 793 RSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMS-SST 851

Query: 758 APIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             +R+ KNLRVC DCH A K+IS +  + I++RD++RFHHF  G+CSCGDYW
Sbjct: 852 DTVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 146/552 (26%), Positives = 270/552 (48%), Gaps = 17/552 (3%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++  Y     L + +++F+    ++  +W+++I  Y+ +G    A  +F +MQ EG R
Sbjct: 66  NHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVR 125

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
               T   VL+ C+  G L +G   H + +++     + +   L+ +Y  C C+  A  L
Sbjct: 126 CDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLL 185

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F+     ++ V+W   I   +Q+G    A+E F+ M++EGV   + T    LT CA +  
Sbjct: 186 FEKME--RDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCATIRQ 243

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
                 +H  +  SG E  + V +AL   YA+ G L  A+ + + +   + VSWN+M+  
Sbjct: 244 ---AQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGA 300

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           +A+ G   EA  LF +M    I     T   ++N       L   + +H   ++ G +  
Sbjct: 301 YAQHGHMSEAALLFARMLHEGISPSKVT---LVNASTGCSSLRFGRMIHGCALEKGLDRD 357

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
             + NAL+DMY + G+ + A  +F  +   + +SW ++I G +  G  + A++ F  M++
Sbjct: 358 IVLGNALLDMYTRCGSPEEARHLFKRI-PCNAVSWNTMIAGSSQKGQMKRAVELFQRMQL 416

Query: 431 SGICPDHVVVSSILSACA----ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
            G+ P      ++L A A    E   +  G+++H+  +  G  S  ++  ++V +YA CG
Sbjct: 417 EGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCG 476

Query: 487 CINDANRVFD--SMHTR-DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
            I++A   F   +M  R DV++W A+I   +Q+G GK AL F+ +M   G  P+ IT V 
Sbjct: 477 AIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVA 536

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           +L AC+ A          + + +  G++        +  + GR G L  A+ + +++  E
Sbjct: 537 VLDACAGAAALTEGEIVHDHL-RHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVE 595

Query: 604 PDATVWKALLSA 615
            D  ++ A+++A
Sbjct: 596 RDVVIFNAMIAA 607



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 141/506 (27%), Positives = 244/506 (48%), Gaps = 25/506 (4%)

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           RP+   L  +LR      LL +G + H   +     L   +   L+ +Y KC+ + + E 
Sbjct: 28  RPAH--LVRLLRAAGDDRLLSQGRRIHARIVS--LGLEEELGNHLLRLYLKCESLGDVEE 83

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +F    + ++  +WTT+IT Y+++G   +AI  F  M+ EGV  +  TF ++L ACA + 
Sbjct: 84  VFSRL-EVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLG 142

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
               G  +H  I+ SG +    + + L+ +Y  CG + SA  L E  E D  VSWN+ I 
Sbjct: 143 DLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKMERDL-VSWNAAIA 201

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
             A+ G    AL LF++M    ++    T    L   A+   +  A+++H ++ ++G E 
Sbjct: 202 ANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCAT---IRQAQAIHFIVRESGLEQ 258

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
              V+ AL   YA+ G+L  A  VF+   ++DV+SW +++   A HG   EA   F+ M 
Sbjct: 259 TLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARML 318

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
             GI P  V + +  + C+    L FG+ +H   L+ G    + + N+L+ +Y +CG   
Sbjct: 319 HEGISPSKVTLVNASTGCSS---LRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPE 375

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
           +A  +F  +   + ++W  +I G +Q G+ K A++ + +M   G  P   T++ LL A +
Sbjct: 376 EARHLFKRIPC-NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVA 434

Query: 550 H-----AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ--MVG 602
                   +AE  + +   +   Y  +P       ++ +    G + EA A   +  M  
Sbjct: 435 SNPEEARAMAEGRKLHSRIVSCGYASEPAIG--TAVVKMYASCGAIDEAAASFQRGAMED 492

Query: 603 EPDATVWKALLSACRVHGDLELGERA 628
             D   W A++S+   HG    G+RA
Sbjct: 493 RHDVVSWNAIISSLSQHGH---GKRA 515



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 201/436 (46%), Gaps = 33/436 (7%)

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           G ++H  I+S G E  +   + L+ +Y KC  L     +    E+ +E SW ++I  +  
Sbjct: 48  GRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTE 105

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
            G  K A+ +F +M    ++ D  T+ +VL   A   DL+  +S+H+ IV++G +G   +
Sbjct: 106 HGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVL 165

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
            N L+ +Y   G +  A ++F  M+ +D++SW + I   A  G    AL+ F  M++ G+
Sbjct: 166 ANLLLHIYGSCGCVASAMLLFEKME-RDLVSWNAAIAANAQSGDLGIALELFQRMQLEGV 224

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
            P  + +   L+ CA    +   Q +H +  +SG   +L V  +L   YA+ G +  A  
Sbjct: 225 RPARITLVIALTVCA---TIRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKE 281

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGL 553
           VFD    RDV++W A++   AQ+G   EA   + +ML  G  P  +T V     CS    
Sbjct: 282 VFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSS--- 338

Query: 554 AENARWYFESMDKVYGIKPGPDHYA----CMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
                  F  M     ++ G D        ++D+  R G   EA+ L  ++    +A  W
Sbjct: 339 -----LRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRI--PCNAVSW 391

Query: 610 KALLSACRVHGDLELGERAANNLF---ELEPMNAMPYVQLSNMYSTAGKWEDA---ARVR 663
             +++     G +    + A  LF   +LE M  +    L+ + + A   E+A   A  R
Sbjct: 392 NTMIAGSSQKGQM----KRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGR 447

Query: 664 KL---MKSRGIRKEPG 676
           KL   + S G   EP 
Sbjct: 448 KLHSRIVSCGYASEPA 463


>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 790

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 294/772 (38%), Positives = 416/772 (53%), Gaps = 102/772 (13%)

Query: 140 LRLCS--LKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF--P 195
           LRLC    +  LQ     HG  I   F  +A ++  L+D+Y K   +  A  LF     P
Sbjct: 19  LRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEP 78

Query: 196 DG------------------------------KNHVAWTTMITGYSQNGYGFKAIECFRD 225
           D                               ++ V +  MITG+S N  G+ AI  F  
Sbjct: 79  DKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCK 138

Query: 226 MRVEGVESNQFTFPSILTACA-AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
           M+ EG + + FT+ S+L   A  V       Q H   L SG      V +AL+ +Y++C 
Sbjct: 139 MKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCA 198

Query: 285 D----LDSARRLLEYSEIDNEVSW--------------------------------NSMI 308
                L SAR++ +     +E SW                                N+MI
Sbjct: 199 SSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMI 258

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
            G+   G ++EAL + ++M +  I++D+FTYPSV+   A+   L   K VH+ +++    
Sbjct: 259 SGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDF 318

Query: 369 GYKFVN------------------------------NALIDMYAKQGNLDCAFMVFNLMQ 398
            + F N                              NAL+  Y   G++  A ++F  M+
Sbjct: 319 SFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK 378

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
           +K+++SW  +I+G A +G  EE LK FS M+  G  P     S  + +CA L     GQQ
Sbjct: 379 EKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQ 438

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK 518
            HA  +K G  SSLS  N+L+ +YAKCG + +A +VF +M   D ++W ALI    Q+G 
Sbjct: 439 FHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGH 498

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA 578
           G EA+  Y++ML +G +PD ITF+ +L ACSHAGL +  R YF SM+ VY I PG DHYA
Sbjct: 499 GVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYA 558

Query: 579 CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM 638
            +IDLL RSGK  EA+++++ +  +P A +W+ALLS CRVHG++ELG  AA+ LF L P 
Sbjct: 559 RLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPE 618

Query: 639 NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPL 698
           +   Y+ LSNMY+  G+WE+ ARVRKLM+ RG++KE  CSW+E  +QVH F+ +D  HP 
Sbjct: 619 HDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPE 678

Query: 699 RTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEG-KEIGLAYHSEKLAVAFGLLTLPQG 757
              +Y  + ++   ++  GYVPD +F LH+VE +G KE  L  HSEK+AVAFGL+ LP G
Sbjct: 679 AEAVYKYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPG 738

Query: 758 APIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             IRIFKNLR CGDCH   +++S V  R IILRD  RFHHF+ G CSCG++W
Sbjct: 739 TTIRIFKNLRTCGDCHNFFRFLSKVVQRDIILRDRKRFHHFRNGECSCGNFW 790



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 165/610 (27%), Positives = 276/610 (45%), Gaps = 89/610 (14%)

Query: 9   LNFSLRCRSKIIGPARYTHNVGNSV----KP-ASDLNRALVDFSNSGEIDEAGQLFEKMS 63
           L   L  R   +  AR  H  GN +    +P A  LNR +  +  S E+D A QLF+++S
Sbjct: 19  LRLCLPLRRTSLQLARAVH--GNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEIS 76

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETP--FKNFFTWSSLIYGYSNYGLDIEAFELF 121
           + D     TM++ Y  SG +  A+ +F ETP   ++   ++++I G+S+      A  LF
Sbjct: 77  EPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLF 136

Query: 122 WQMQLEGYRPSQYTLDNVLR-LCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK 180
            +M+ EG++P  +T  +VL  L  +    ++  QFH  A+K+       V   LV +Y++
Sbjct: 137 CKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSR 196

Query: 181 C----KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG---------------------- 214
           C      +  A  +F   P+ K+  +WTTM+TGY +NG                      
Sbjct: 197 CASSPSLLHSARKVFDDIPE-KDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYN 255

Query: 215 ---YGF-------KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS 264
               G+       +A+E  R M   G+E ++FT+PS++ ACA       G QVH  +L  
Sbjct: 256 AMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRR 315

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS------------------ 306
             + + +  ++L+ +Y KCG  + AR + E     + VSWN+                  
Sbjct: 316 E-DFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIF 374

Query: 307 -------------MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
                        MI G A  GF +E L LF  M     +  D+ +   +   A      
Sbjct: 375 KEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYC 434

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
           N +  H+ +VK GF+      NALI MYAK G ++ A  VF  M   D +SW +LI    
Sbjct: 435 NGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALG 494

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ----VHAVFLKSGGC 469
            HG   EA+  + +M   GI PD +   ++L+AC+   +++ G++    +  V+    G 
Sbjct: 495 QHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGA 554

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVI-TWTALIMGCAQNGKGKEALQFYDQ 528
              +    L+ +  + G  ++A  + +S+  +     W AL+ GC  +G  +  +   D+
Sbjct: 555 DHYA---RLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADK 611

Query: 529 MLARGTKPDY 538
           +   G  P++
Sbjct: 612 LF--GLIPEH 619



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 159/335 (47%), Gaps = 12/335 (3%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  +   G+ +EA  +FEKM  +D  +WN +++ Y +SG + EAK +F E   KN  
Sbjct: 324 NSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNIL 383

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           +W  +I G +  G   E  +LF  M+ EG+ P  Y     ++ C++ G    G+QFH   
Sbjct: 384 SWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQL 443

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           +K  FD +      L+ MYAKC  + EA+ +F+  P   + V+W  +I    Q+G+G +A
Sbjct: 444 VKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMP-CLDSVSWNALIAALGQHGHGVEA 502

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI-----LSSGFEANVYVQS 274
           ++ + +M  +G+  ++ TF ++LTAC+     D G +    +     +  G  A+ Y + 
Sbjct: 503 VDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPG--ADHYAR- 559

Query: 275 ALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIVGFARQGFHKEALSLFKKMHARDIK 333
            LID+  + G    A  ++E          W +++ G    G  +  +    K+    I 
Sbjct: 560 -LIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGL-IP 617

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
             D TY  + N +A+         V  L+   G +
Sbjct: 618 EHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVK 652



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 182/416 (43%), Gaps = 91/416 (21%)

Query: 341 SVLNCFASNI---------DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
           ++ N +A+N+          L  A++VH  I+  GF+ +  + N LID+Y K   LD A 
Sbjct: 10  AIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYAR 69

Query: 392 MVFNLMQDKDVISWTSLITGCAYHGS-------YEE------------------------ 420
            +F+ + + D I+ T++++G    G        +EE                        
Sbjct: 70  QLFDEISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDG 129

Query: 421 --ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ--QVHAVFLKSGGCSSLSVDN 476
             A+  F  M+  G  PD    +S+L+  A L V +  Q  Q HA  LKSG     SV N
Sbjct: 130 YSAINLFCKMKHEGFKPDDFTYASVLAGLA-LVVDDEKQCVQFHAAALKSGAGYVTSVSN 188

Query: 477 SLVLVYAKCGC----INDANRVFDSMHTRDVITWTALIMGCAQNG---------KG---- 519
           +LV VY++C      ++ A +VFD +  +D  +WT ++ G  +NG         KG    
Sbjct: 189 ALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDEN 248

Query: 520 -------------------KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWY 560
                              +EAL+   +M++ G + D  T+  ++ AC++A L +  +  
Sbjct: 249 MKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQV 308

Query: 561 FESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
              + +        D+   ++ L  + GK  EA+A+ ++M  + D   W ALLS     G
Sbjct: 309 HAYVLRREDFSFHFDN--SLVTLYYKCGKFNEARAIFEKMPAK-DLVSWNALLSGYVSSG 365

Query: 621 DLELGERAANNLF-ELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEP 675
              +GE  A  +F E++  N + ++ + +  +  G  E+  ++   MK  G   EP
Sbjct: 366 --HIGE--AKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGF--EP 415


>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1038

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 281/771 (36%), Positives = 433/771 (56%), Gaps = 33/771 (4%)

Query: 40   NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
            N  +  F N G +D A  +F ++S+RD  +WN+++AAYA +G + E+ ++FN        
Sbjct: 300  NSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFN-------- 351

Query: 100  TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
                                L  +   E    +  TL +VL     +   + G   HG  
Sbjct: 352  --------------------LMRRFHDEVNSTTVSTLLSVLGDVDHQ---KWGRGIHGLV 388

Query: 160  IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
            +K  FD    V   L+ MYA      EA+ +FK  P  K+ ++W +++  +  +G    A
Sbjct: 389  VKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPT-KDLISWNSLMASFVNDGRSLDA 447

Query: 220  IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
            +     M   G   N  TF S L AC +    D G  +HG ++ SG   N  + +AL+ M
Sbjct: 448  LGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSM 507

Query: 280  YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
            Y K G + ++RR+L      + V+WN++I G+A      +AL+ F+ +    +  +  T 
Sbjct: 508  YGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITV 567

Query: 340  PSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
             SVL+ C      L   K +H+ IV  GFE  + V N+LI MYAK G+L  +  +FN + 
Sbjct: 568  VSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD 627

Query: 399  DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
            ++ +I+W +++   A+HG  EE LK  S MR  G+  D    S  LSA A+L VLE GQQ
Sbjct: 628  NRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQ 687

Query: 459  VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK 518
            +H + +K G      + N+   +Y+KCG I +  ++      R + +W  LI    ++G 
Sbjct: 688  LHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGY 747

Query: 519  GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA 578
             +E  + + +ML  G KP ++TFV LL ACSH GL +    Y++ + K +G++P  +H  
Sbjct: 748  FEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCI 807

Query: 579  CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM 638
            C+IDLLGRSG+L EA+  + +M  +P+  VW++LL++C++H DL+ G +AA NL +LEP 
Sbjct: 808  CVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPE 867

Query: 639  NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPL 698
            +   +V  SNM++T G+WED   VRK M  + I+K+  CSWV+   +V  F   DR HP 
Sbjct: 868  DDSVFVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQ 927

Query: 699  RTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA 758
              +IY+K+++I  LIKE+GYV D + AL + +EE KE  L  HSE+LA+A+ L++ P+G+
Sbjct: 928  TMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGS 987

Query: 759  PIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             +RIFKNLR+C DCH+  K++S V  R I+LRD  RFHHF++G CSC DYW
Sbjct: 988  TVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFESGLCSCKDYW 1038



 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 159/555 (28%), Positives = 281/555 (50%), Gaps = 5/555 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           NT+I  Y   GR++ A+ LF++ P +N  +W++++ G    GL +E  E F +M   G +
Sbjct: 97  NTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMCDLGIK 156

Query: 131 PSQYTLDNVLRLCSLKG-LLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           PS + + +++  C   G + + G Q HG+  K+    + +V T ++ +Y     +  +  
Sbjct: 157 PSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRK 216

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +F+  PD +N V+WT+++ GYS  G   + I+ ++ MR EGVE N+ +   ++++C  + 
Sbjct: 217 VFEEMPD-RNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLK 275

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
               G Q+ G ++ SG E+ + V+++LI M+   G++D A  +       + +SWNS++ 
Sbjct: 276 DESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVA 335

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
            +A+ G  +E+  +F  M     +++  T  ++L+           + +H L+VK GF+ 
Sbjct: 336 AYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDS 395

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
              V N L+ MYA  G  + A +VF  M  KD+ISW SL+      G   +AL     M 
Sbjct: 396 VVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMI 455

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
            +G   ++V  +S L+AC      + G+ +H + + SG   +  + N+LV +Y K G ++
Sbjct: 456 RTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMS 515

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
            + RV   M  RDV+ W ALI G A+N    +AL  +  +   G   +YIT V +L AC 
Sbjct: 516 TSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACL 575

Query: 550 HAG-LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
             G L E  +     +    G +        +I +  + G L  ++ L + +      T 
Sbjct: 576 VPGDLLERGKPLHAYIVSA-GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIIT- 633

Query: 609 WKALLSACRVHGDLE 623
           W A+L+A   HG  E
Sbjct: 634 WNAILAANAHHGHGE 648



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 151/560 (26%), Positives = 274/560 (48%), Gaps = 6/560 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +    ++  Y   G +  ++K+F E P +N  +W+SL+ GYS+ G   E  +++  M+
Sbjct: 194 DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMR 253

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            EG   ++ ++  V+  C L      G Q  G  IK+  +    V   L+ M+     + 
Sbjct: 254 GEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVD 313

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A Y+F    + ++ ++W +++  Y+QNG+  ++   F  MR    E N  T  ++L+  
Sbjct: 314 YANYIFNQISE-RDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVL 372

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
             V  + +G  +HG ++  GF++ V V + L+ MYA  G  + A  + +     + +SWN
Sbjct: 373 GDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWN 432

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVK 364
           S++  F   G   +AL +   M      ++  T+ S L  CF+     +  + +H L+V 
Sbjct: 433 SLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEF-FDKGRILHGLVVV 491

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
           +G    + + NAL+ MY K G +  +  V   M  +DV++W +LI G A +   ++AL  
Sbjct: 492 SGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAA 551

Query: 425 FSDMRISGICPDHVVVSSILSAC-AELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
           F  +R+ G+  +++ V S+LSAC     +LE G+ +HA  + +G  S   V NSL+ +YA
Sbjct: 552 FQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYA 611

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG ++ +  +F+ +  R +ITW A++   A +G G+E L+   +M + G   D  +F  
Sbjct: 612 KCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSE 671

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
            L A +   + E  +     +    G +     +    D+  + G++ E   +L   V  
Sbjct: 672 GLSAAAKLAVLEEGQ-QLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNR 730

Query: 604 PDATVWKALLSACRVHGDLE 623
              + W  L+SA   HG  E
Sbjct: 731 SLPS-WNILISALGRHGYFE 749



 Score =  216 bits (549), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 131/463 (28%), Positives = 236/463 (50%), Gaps = 4/463 (0%)

Query: 152 GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYS 211
           G   H   +K    L+      L++MY K   +  A YLF   P  +N V+W TM++G  
Sbjct: 77  GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPV-RNEVSWNTMMSGIV 135

Query: 212 QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA-AVSARDFGAQVHGCILSSGFEANV 270
           + G   + +E F+ M   G++ + F   S++TAC  + S    G QVHG +  SG  ++V
Sbjct: 136 RVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDV 195

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
           YV +A++ +Y   G +  +R++ E     N VSW S++VG++ +G  +E + ++K M   
Sbjct: 196 YVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGE 255

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
            ++ ++ +   V++      D +  + +   ++K+G E    V N+LI M+   GN+D A
Sbjct: 256 GVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYA 315

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
             +FN + ++D ISW S++   A +G  EE+ + F+ MR      +   VS++LS   ++
Sbjct: 316 NYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDV 375

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
              ++G+ +H + +K G  S + V N+L+ +YA  G   +A+ VF  M T+D+I+W +L+
Sbjct: 376 DHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLM 435

Query: 511 MGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGI 570
                +G+  +AL     M+  G   +Y+TF   L AC      +  R     +  V G+
Sbjct: 436 ASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGR-ILHGLVVVSGL 494

Query: 571 KPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
                    ++ + G+ G +  ++ +L QM    D   W AL+
Sbjct: 495 FDNQIIGNALVSMYGKIGGMSTSRRVLLQM-PRRDVVAWNALI 536



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 189/380 (49%), Gaps = 15/380 (3%)

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           T  + ++    G  +H   +      +V   + LI+MY K G +  AR L +   + NEV
Sbjct: 66  TGFSQITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEV 125

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSL 361
           SWN+M+ G  R G + E +  F+KM    IK   F   S++  C  S         VH  
Sbjct: 126 SWNTMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGF 185

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           + K+G     +V+ A++ +Y   G + C+  VF  M D++V+SWTSL+ G +  G  EE 
Sbjct: 186 VAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEV 245

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           +  +  MR  G+  +   +S ++S+C  L     G+Q+    +KSG  S L+V+NSL+ +
Sbjct: 246 IDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISM 305

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           +   G ++ AN +F+ +  RD I+W +++   AQNG  +E+ + ++ M     + +  T 
Sbjct: 306 FGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTV 365

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYG--IKPGPDHYACMIDLLGR----SGKLIEAKA 595
             LL   S  G  ++ +W       ++G  +K G D   C+ + L R    +G+  EA  
Sbjct: 366 STLL---SVLGDVDHQKWG----RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADL 418

Query: 596 LLDQMVGEPDATVWKALLSA 615
           +  QM  + D   W +L+++
Sbjct: 419 VFKQMPTK-DLISWNSLMAS 437



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 177/390 (45%), Gaps = 38/390 (9%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           +  ALV  +   G +  + ++  +M  RD   WN +I  YA            NE P K 
Sbjct: 500 IGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAE-----------NEDPDK- 547

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKG-LLQRGEQFH 156
                              A   F  +++EG   +  T+ +VL  C + G LL+RG+  H
Sbjct: 548 -------------------ALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLH 588

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
            Y +   F+ +  V   L+ MYAKC  +  ++ LF    D ++ + W  ++   + +G+G
Sbjct: 589 AYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGL-DNRSIITWNAILAANAHHGHG 647

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
            + ++    MR  G+  +QF+F   L+A A ++  + G Q+HG  +  GFE + ++ +A 
Sbjct: 648 EEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAA 707

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
            DMY+KCG++    ++L  S   +  SWN +I    R G+ +E    F +M    IK   
Sbjct: 708 ADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGH 767

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKT-GFEGYKFVNNALIDMYAKQGNLDCA--FMV 393
            T+ S+L   +    ++   + + +I K  G E        +ID+  + G L  A  F+ 
Sbjct: 768 VTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFIS 827

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALK 423
              M+  D++ W SL+  C  H   +   K
Sbjct: 828 KMPMKPNDLV-WRSLLASCKIHRDLDRGRK 856


>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 266/745 (35%), Positives = 427/745 (57%), Gaps = 5/745 (0%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFK--NFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           F  N +IA Y   G L  A+ LF+    +  +  +W+S+I  +   G  +EA  LF +MQ
Sbjct: 181 FVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQ 240

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G   + YT    L+       ++ G   HG  +K+    + +V   L+ MYAKC  + 
Sbjct: 241 EVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRME 300

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A  +F+     +++V+W T+++G  QN     A+  FRDM+  G + +Q +  +++ A 
Sbjct: 301 DAGRVFESML-CRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAAS 359

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
                   G +VH   + +G ++N+ + + L+DMYAKC  +       E     + +SW 
Sbjct: 360 GRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWT 419

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           ++I G+A+  FH EA++LF+K+  + + +D     SVL   +     N  + +H  + K 
Sbjct: 420 TIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKR 479

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
                  + NA++++Y + G++D A   F  ++ KD++SWTS+IT C ++G   EAL+ F
Sbjct: 480 DLADI-MLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELF 538

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             ++ + I PD + + S LSA A L+ L+ G+++H   ++ G      + +SLV +YA C
Sbjct: 539 YSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACC 598

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G + ++ ++F S+  RD+I WT++I     +G G +A+  + +M  +   PD+ITF+ LL
Sbjct: 599 GTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALL 658

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
           +ACSH+GL    + +FE M   Y ++P P+HYACM+DLL RS  L EA   +  M  +P 
Sbjct: 659 YACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPS 718

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
           + +W ALL AC +H + ELGE AA  L + +  N+  Y  +SN+++  G+W D   VR  
Sbjct: 719 SEIWCALLGACHIHSNKELGELAAKELLQSDTENSGKYALISNIFAADGRWNDVEEVRLR 778

Query: 666 MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIM-LLIKEAGYVPDMNF 724
           MK  G++K PGCSW+E ++++H F++ D+ HP   DIY K+ +   LL K+ GY+    F
Sbjct: 779 MKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLEKKGGYIAQTKF 838

Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
             HNV EE K   L  HSE+LA+ +GLL  P+G  IRI KNLR+C DCHT  K  S V  
Sbjct: 839 VFHNVSEEEKTQMLYGHSERLALGYGLLVTPKGTCIRITKNLRICDDCHTFFKIASEVSQ 898

Query: 785 RHIILRDSNRFHHFKAGNCSCGDYW 809
           R +++RD+NRFHHF+ G CSCGD+W
Sbjct: 899 RPLVVRDANRFHHFERGLCSCGDFW 923



 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 178/647 (27%), Positives = 321/647 (49%), Gaps = 18/647 (2%)

Query: 43  LVDFSNSGEIDEAGQLFEKM---SDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           L+D   + +    GQ    +   S    F    ++  Y   G LR+A K+F+E   +  F
Sbjct: 52  LLDLCVAAKALPQGQQLHALLLKSHLSAFLATKLVLMYGKCGSLRDAVKVFDEMSERTIF 111

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           +W++L+  + + G  +EA EL+  M++ G      T  +VL+ C   G  + G + HG A
Sbjct: 112 SWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVA 171

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK-MFPDGKNHVAWTTMITGYSQNGYGFK 218
           +K  +    FV   L+ MY KC  +  A  LF  +  + ++ V+W ++I+ +   G   +
Sbjct: 172 VKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLE 231

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID 278
           A+  FR M+  GV SN +TF + L      S    G  +HG +L S   A+VYV +ALI 
Sbjct: 232 ALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIA 291

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
           MYAKCG ++ A R+ E     + VSWN+++ G  +   + +AL+ F+ M     K D  +
Sbjct: 292 MYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVS 351

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
             +++     + +L   K VH+  ++ G +    + N L+DMYAK   +      F  M 
Sbjct: 352 VLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMH 411

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
           +KD+ISWT++I G A +  + EA+  F  +++ G+  D +++ S+L AC+ L    F ++
Sbjct: 412 EKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIRE 471

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK 518
           +H    K    + + + N++V VY + G I+ A R F+S+ ++D+++WT++I  C  NG 
Sbjct: 472 IHGYVFKR-DLADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGL 530

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA 578
             EAL+ +  +     +PD I  +  L A ++    +  +     + +      GP   +
Sbjct: 531 PVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPI-AS 589

Query: 579 CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM 638
            ++D+    G +  ++ +    V + D  +W ++++A  +HG    G +A     ++   
Sbjct: 590 SLVDMYACCGTVENSRKMFHS-VKQRDLILWTSMINANGMHG---CGNKAIALFKKMTDQ 645

Query: 639 NAMP----YVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVE 681
           N +P    ++ L    S +G   +  R  ++MK  G + EP   W E
Sbjct: 646 NVIPDHITFLALLYACSHSGLMVEGKRFFEIMK-YGYQLEP---WPE 688



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 122/475 (25%), Positives = 217/475 (45%), Gaps = 60/475 (12%)

Query: 21  GPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           G   + + + N +     +   LVD ++    +   G  FE M ++D  +W T+IA YA 
Sbjct: 368 GKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQ 427

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
                      NE                      +EA  LF ++Q++G       + +V
Sbjct: 428 -----------NE--------------------FHLEAINLFRKVQVKGMDVDPMMIGSV 456

Query: 140 LRLCSLKGLLQRG--EQFHGYAIKTCFDL-NAFVVTGLVDMYAKCKCIFEAEYLFKMFPD 196
           LR CS  GL  R    + HGY  K   DL +  +   +V++Y +   I  A   F+    
Sbjct: 457 LRACS--GLKSRNFIREIHGYVFKR--DLADIMLQNAIVNVYGEVGHIDYARRAFESI-R 511

Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
            K+ V+WT+MIT    NG   +A+E F  ++   ++ +     S L+A A +S+   G +
Sbjct: 512 SKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKE 571

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           +HG ++  GF     + S+L+DMYA CG ++++R++    +  + + W SMI      G 
Sbjct: 572 IHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGC 631

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
             +A++LFKKM  +++  D  T+ ++L  C  S + +   +     I+K G++   +  +
Sbjct: 632 GNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFE--IMKYGYQLEPWPEH 689

Query: 376 --ALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYE-------EALKYF 425
              ++D+ ++  +L+ A+  V N+        W +L+  C  H + E       E L+  
Sbjct: 690 YACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQ-- 747

Query: 426 SDMRISGICPDHVVVSSILSACAELT-VLEFGQQVHAVFLKSG-GCSSLSVDNSL 478
           SD   SG    + ++S+I +A      V E   ++    LK   GCS + VDN +
Sbjct: 748 SDTENSG---KYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKI 799



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 119/268 (44%), Gaps = 44/268 (16%)

Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT 500
           S +L  C     L  GQQ+HA+ LKS   + L+    LVL+Y KCG + DA +VFD M  
Sbjct: 50  SLLLDLCVAAKALPQGQQLHALLLKSHLSAFLA--TKLVLMYGKCGSLRDAVKVFDEMSE 107

Query: 501 RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWY 560
           R + +W AL+     +GK  EA++ Y  M   G   D  TF  +L AC   G    +R  
Sbjct: 108 RTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALG---ESRLG 164

Query: 561 FESMDKVYGIKPGPDHYAC--MIDLLGRSGKLIEAKALLDQMVGEPDATV-WKALLSACR 617
            E          G   + C  +I + G+ G L  A+ L D ++ E + TV W +++SA  
Sbjct: 165 AEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHV 224

Query: 618 VHGD----LELGER-----AANNLFE----LEPMNAMPYVQL----------SN------ 648
             G+    L L  R      A+N +     L+ +    +V+L          SN      
Sbjct: 225 AEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVY 284

Query: 649 -------MYSTAGKWEDAARVRKLMKSR 669
                  MY+  G+ EDA RV + M  R
Sbjct: 285 VANALIAMYAKCGRMEDAGRVFESMLCR 312


>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
           [Vitis vinifera]
          Length = 836

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 285/759 (37%), Positives = 422/759 (55%), Gaps = 35/759 (4%)

Query: 84  REAKKLFNETPFKN--FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLR 141
           R+A +LF E    +   F  +SLI GYS+ GL  EA  L+ +M + G  P+ YT   VL 
Sbjct: 80  RKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLS 139

Query: 142 LCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHV 201
            C+       G Q HG  +K   + + F+   L+  YA+C  +     +F+   + +N V
Sbjct: 140 GCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSE-RNVV 198

Query: 202 AWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI 261
           +WT++I GY++     +A+  F +M   G+  +  T   +++ACA +   D G +V   I
Sbjct: 199 SWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYI 258

Query: 262 LSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEAL 321
              G + N  + +AL+DMY KCG +D+A+RL +     N V +N+++  +ARQG  +EAL
Sbjct: 259 GELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREAL 318

Query: 322 SLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMY 381
           ++  +M  +  + D  T  S ++  A  +DL   K  H  +++ G EG+  + N +IDMY
Sbjct: 319 AILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMY 378

Query: 382 AKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS------------------------ 417
            K G  + A  VF+LM +K V+SW SL  G   +G                         
Sbjct: 379 MKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMIS 438

Query: 418 -------YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
                  +E+A++ F +M+  GI  D V +  I SAC  L   E  + VH    K+G   
Sbjct: 439 GLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPC 498

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
            + ++ +LV ++A+CG    A +VF+ M  RDV  WTA I   A  G G+ A   ++QML
Sbjct: 499 DMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQML 558

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKL 590
            +G KPD + FV +L ACSH G  E     F  M+  +GI P  +HY CM+DLLGR+G L
Sbjct: 559 IQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMED-HGISPQIEHYGCMVDLLGRAGLL 617

Query: 591 IEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMY 650
            EA  L+  M  EP+  VW +LL+ACRVH ++E+   AA  + EL P  A  +V LSN+Y
Sbjct: 618 REAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIY 677

Query: 651 STAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIM 710
           ++AGKW D ARVR  ++ +G+RK PG S V+ N  +H F S D  HP  T I   + E+ 
Sbjct: 678 ASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMN 737

Query: 711 LLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCG 770
               +AG++PD++  L +V+E+ KE  L+ HSEKLA+AFGL+   +  PIR+ KNLR+C 
Sbjct: 738 CRFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCS 797

Query: 771 DCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           DCH+  K  S +Y R II+RD+NRFH F+ G CSC DYW
Sbjct: 798 DCHSFAKMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 836



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 142/491 (28%), Positives = 226/491 (46%), Gaps = 35/491 (7%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G + +   + D F  N +I  YA  G +    K+F     +N  +W+SLI GY+      
Sbjct: 155 GSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPK 214

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  LF++M   G RPS  T+  V+  C+    L  GE+   Y  +    LN  +V  LV
Sbjct: 215 EAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALV 274

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMY KC  I  A+ LF    D +N V + T+++ Y++ G   +A+    +M  +G   ++
Sbjct: 275 DMYMKCGAIDAAKRLFDECVD-RNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDR 333

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            T  S ++A A +    +G   HG ++ +G E    + + +IDMY KCG  + A R+ + 
Sbjct: 334 VTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDL 393

Query: 296 SEIDNEVSWNSMIVGFARQG-------------------------------FHKEALSLF 324
                 VSWNS+  GF R G                                 ++A+ LF
Sbjct: 394 MSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELF 453

Query: 325 KKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
           ++M    IK D  T   + +          AK VH+ I K G      +N AL+DM+A+ 
Sbjct: 454 REMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARC 513

Query: 385 GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
           G+   A  VFN M ++DV +WT+ I   A  G+ E A   F+ M I G+ PD V+   +L
Sbjct: 514 GDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVL 573

Query: 445 SACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS--MHTRD 502
           +AC+    +E G  + ++    G    +     +V +  + G + +A  +  S  M   D
Sbjct: 574 TACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPND 633

Query: 503 VITWTALIMGC 513
           V+ W +L+  C
Sbjct: 634 VV-WGSLLAAC 643



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 138/290 (47%), Gaps = 3/290 (1%)

Query: 21  GPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           G   + + + N ++    +   ++D +   G+ + A ++F+ MS++   +WN++ A +  
Sbjct: 352 GKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIR 411

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
           +G +  A ++FN+ P +N   W+++I G     L  +A ELF +MQ EG +  + T+  +
Sbjct: 412 NGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGI 471

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKN 199
              C   G  +  +  H Y  K     +  + T LVDM+A+C     A  +F    + ++
Sbjct: 472 ASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTE-RD 530

Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG 259
             AWT  I   +  G G  A   F  M ++GV+ +   F  +LTAC+     + G  +  
Sbjct: 531 VSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFS 590

Query: 260 CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
            +   G    +     ++D+  + G L  A  L++   ++ N+V W S++
Sbjct: 591 LMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLL 640


>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g09950
 gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 299/759 (39%), Positives = 445/759 (58%), Gaps = 20/759 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  + +++A+A SG L  A+K+FN+   +N  T + L+ G        EA +LF  M 
Sbjct: 242 DLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN 301

Query: 126 -LEGYRPSQYTLDNVLRLCSLKGL-------LQRGEQFHGYAIKT-CFDLNAFVVTGLVD 176
            +    P  Y    V+ L S           L++G + HG+ I T   D    +  GLV+
Sbjct: 302 SMIDVSPESY----VILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVN 357

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           MYAKC  I +A  +F    D K+ V+W +MITG  QNG   +A+E ++ MR   +    F
Sbjct: 358 MYAKCGSIADARRVFYFMTD-KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSF 416

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           T  S L++CA++     G Q+HG  L  G + NV V +AL+ +YA+ G L+  R++    
Sbjct: 417 TLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM 476

Query: 297 EIDNEVSWNSMIVGFAR-QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
              ++VSWNS+I   AR +    EA+  F        K++  T+ SVL+  +S       
Sbjct: 477 PEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELG 536

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAY 414
           K +H L +K          NALI  Y K G +D    +F+ M ++ D ++W S+I+G  +
Sbjct: 537 KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIH 596

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
           +    +AL     M  +G   D  + +++LSA A +  LE G +VHA  +++   S + V
Sbjct: 597 NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVV 656

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG- 533
            ++LV +Y+KCG ++ A R F++M  R+  +W ++I G A++G+G+EAL+ ++ M   G 
Sbjct: 657 GSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQ 716

Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
           T PD++TFVG+L ACSHAGL E    +FESM   YG+ P  +H++CM D+LGR+G+L + 
Sbjct: 717 TPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKL 776

Query: 594 KALLDQMVGEPDATVWKALLSAC-RVHG-DLELGERAANNLFELEPMNAMPYVQLSNMYS 651
           +  +++M  +P+  +W+ +L AC R +G   ELG++AA  LF+LEP NA+ YV L NMY+
Sbjct: 777 EDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYA 836

Query: 652 TAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIML 711
             G+WED  + RK MK   ++KE G SWV     VH+F++ D+ HP    IY K+ E+  
Sbjct: 837 AGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNR 896

Query: 712 LIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA-PIRIFKNLRVCG 770
            +++AGYVP   FAL+++E+E KE  L+YHSEKLAVAF L        PIRI KNLRVCG
Sbjct: 897 KMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCG 956

Query: 771 DCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           DCH+A KYIS +  R IILRDSNRFHHF+ G CSC D+W
Sbjct: 957 DCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 177/579 (30%), Positives = 287/579 (49%), Gaps = 18/579 (3%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
           +L++   D+D +  N +I AY  +G    A+K+F+E P +N  +W+ ++ GYS  G   E
Sbjct: 26  RLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKE 85

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL--LQRGEQFHGYAIKTCFDLNAFVVTGL 174
           A      M  EG   +QY   +VLR C   G   +  G Q HG   K  + ++A V   L
Sbjct: 86  ALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVL 145

Query: 175 VDMYAKCKCIFEAEYLFKMFPD--GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
           + MY   KCI    Y    F D   KN V+W ++I+ YSQ G    A   F  M+ +G  
Sbjct: 146 ISMY--WKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203

Query: 233 SNQFTFPSILTACAAVSARDFG--AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
             ++TF S++T   +++  D     Q+   I  SG   +++V S L+  +AK G L  AR
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYAR 263

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCF---- 346
           ++    E  N V+ N ++VG  RQ + +EA  LF  M++  I +   +Y  +L+ F    
Sbjct: 264 KVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM-IDVSPESYVILLSSFPEYS 322

Query: 347 -ASNIDLNNAKSVHSLIVKTGFEGYKF-VNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
            A  + L   + VH  ++ TG   +   + N L++MYAK G++  A  VF  M DKD +S
Sbjct: 323 LAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVS 382

Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
           W S+ITG   +G + EA++ +  MR   I P    + S LS+CA L   + GQQ+H   L
Sbjct: 383 WNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESL 442

Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKG-KEAL 523
           K G   ++SV N+L+ +YA+ G +N+  ++F SM   D ++W ++I   A++ +   EA+
Sbjct: 443 KLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAV 502

Query: 524 QFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDL 583
             +      G K + ITF  +L A S     E  +     +     I         +I  
Sbjct: 503 VCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGK-QIHGLALKNNIADEATTENALIAC 561

Query: 584 LGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDL 622
            G+ G++   + +  +M    D   W +++S   +H +L
Sbjct: 562 YGKCGEMDGCEKIFSRMAERRDNVTWNSMISG-YIHNEL 599



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 181/376 (48%), Gaps = 18/376 (4%)

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           H  +  +  + +VY+ + LI+ Y + GD  SAR++ +   + N VSW  ++ G++R G H
Sbjct: 24  HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFAS--NIDLNNAKSVHSLIVKTGFEGYKFVNN 375
           KEAL   + M    I  + + + SVL       ++ +   + +H L+ K  +     V+N
Sbjct: 84  KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143

Query: 376 ALIDMYAK-QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
            LI MY K  G++  A   F  ++ K+ +SW S+I+  +  G    A + FS M+  G  
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203

Query: 435 PDHVVVSSILSACAELTV--LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
           P      S+++    LT   +   +Q+     KSG  + L V + LV  +AK G ++ A 
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYAR 263

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQ-FYDQMLARGTKPDYITFVGLLFACSHA 551
           +VF+ M TR+ +T   L++G  +   G+EA + F D        P+  ++V LL +    
Sbjct: 264 KVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEY 321

Query: 552 GLAENARWYFESMDKVYG--IKPGPDHYAC-----MIDLLGRSGKLIEAKALLDQMVGEP 604
            LAE      +   +V+G  I  G   +       ++++  + G + +A+ +   M  + 
Sbjct: 322 SLAEEVG--LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT-DK 378

Query: 605 DATVWKALLSACRVHG 620
           D+  W ++++    +G
Sbjct: 379 DSVSWNSMITGLDQNG 394



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 123/253 (48%), Gaps = 10/253 (3%)

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
           A+  HS + K   +   ++ N LI+ Y + G+   A  VF+ M  ++ +SW  +++G + 
Sbjct: 20  ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL--TVLEFGQQVHAVFLKSGGCSSL 472
           +G ++EAL +  DM   GI  +     S+L AC E+    + FG+Q+H +  K       
Sbjct: 80  NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139

Query: 473 SVDNSLVLVYAKC-GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
            V N L+ +Y KC G +  A   F  +  ++ ++W ++I   +Q G  + A + +  M  
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199

Query: 532 RGTKPDYITFVGLL-FACSHAGLAE-NARWYFESMDKVYGIKPGPDHY--ACMIDLLGRS 587
            G++P   TF  L+  ACS   L E + R   + M  +       D +  + ++    +S
Sbjct: 200 DGSRPTEYTFGSLVTTACS---LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKS 256

Query: 588 GKLIEAKALLDQM 600
           G L  A+ + +QM
Sbjct: 257 GSLSYARKVFNQM 269



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 118/289 (40%), Gaps = 49/289 (16%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           + D    + ++  Y+  GRL  A + FN  P +N ++W+S+I GY+ +G   EA +LF  
Sbjct: 651 ESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFET 710

Query: 124 MQLEGYRPSQY-TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV--VTGLVDMYAK 180
           M+L+G  P  + T   VL  CS  GLL+ G + H  ++   + L   +   + + D+  +
Sbjct: 711 MKLDGQTPPDHVTFVGVLSACSHAGLLEEGFK-HFESMSDSYGLAPRIEHFSCMADVLGR 769

Query: 181 CKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
              + + E   +  P   N + W T                                   
Sbjct: 770 AGELDKLEDFIEKMPMKPNVLIWRT----------------------------------- 794

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI-DMYAKCG---DLDSARRLLEYS 296
           +L AC   + R          +    E    V   L+ +MYA  G   DL  AR+ ++ +
Sbjct: 795 VLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDA 854

Query: 297 EIDNEV--SWNSMIVG----FARQGFHKEALSLFKKMHARDIKIDDFTY 339
           ++  E   SW +M  G     A    H +A  ++KK+   + K+ D  Y
Sbjct: 855 DVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGY 903


>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
 gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
          Length = 852

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 294/796 (36%), Positives = 433/796 (54%), Gaps = 59/796 (7%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           ++A+Y   G    A  +           W+ LI  +   G    A  +  +M   G R  
Sbjct: 57  VVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLD 116

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
            +TL +VL+ C      + G  FHG      F+ N F+   LV MY++C  + EA  +F 
Sbjct: 117 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 176

Query: 193 MFPDG--KNHVAWTTMITGYSQNGYGFKAIECFRDM------RVEGVESNQFTFPSILTA 244
                   + ++W ++++ + ++   + A++ F  M      +     S+  +  +IL A
Sbjct: 177 EITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPA 236

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C ++ A     +VHG  + +G   +V+V +ALID YAKCG +++A ++    E  + VSW
Sbjct: 237 CGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSW 296

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV-------------LNCFASNI- 350
           N+M+ G+++ G  K A  LFK M   +I +D  T+ +V             LN F   I 
Sbjct: 297 NAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIF 356

Query: 351 --DLNNAKSVHSLI--------VKTGFEGYKF---------------------VNNALID 379
              L N  ++ S++           G E + +                     V NALID
Sbjct: 357 SGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALID 416

Query: 380 MYAKQGNLDCAFMVFN--LMQDKDVISWTSLITGCAYHGSYEEALKYFSDM--RISGICP 435
           MY+K  +   A  +F+   +++++V++WT +I G A +G   +ALK F +M     G+ P
Sbjct: 417 MYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAP 476

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSG--GCSSLSVDNSLVLVYAKCGCINDANR 493
           +   +S IL ACA L  +  G+Q+HA  L+      S+  V N L+ +Y+KCG ++ A  
Sbjct: 477 NAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARH 536

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGL 553
           VFDSM  +  I+WT+++ G   +G+G EAL  +D+M   G  PD ITF+ +L+ACSH G+
Sbjct: 537 VFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGM 596

Query: 554 AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
            +    YF+SM   YG+ P  +HYA  IDLL R G+L +A   +  M  EP A VW ALL
Sbjct: 597 VDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALL 656

Query: 614 SACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRK 673
           SACRVH ++EL E A N L E+   N   Y  +SN+Y+TAG+W+D AR+R LMK  GI+K
Sbjct: 657 SACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKK 716

Query: 674 EPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEG 733
            PGCSWV+       F   DR HPL   IY+ ++ ++  IK  GYVP+ NFALH+V+EE 
Sbjct: 717 RPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALHDVDEEE 776

Query: 734 KEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSN 793
           K   L  HSEKLA+A+GLLT   G PIRI KNLRVCGDCH+A  YIS +    I++RD +
Sbjct: 777 KNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIVVRDPS 836

Query: 794 RFHHFKAGNCSCGDYW 809
           RFHHFK G+CSCG YW
Sbjct: 837 RFHHFKNGSCSCGGYW 852



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 139/447 (31%), Positives = 221/447 (49%), Gaps = 37/447 (8%)

Query: 6   FKILNFSLRCRS-KIIGPARYTHNVGNSVKPASDLN----RALVD-FSNSGEIDEAGQLF 59
             I+N    C S K +   +  H  GN+++  + L+     AL+D ++  G ++ A ++F
Sbjct: 228 ISIVNILPACGSLKAVPQTKEVH--GNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVF 285

Query: 60  EKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF----FTWSSLIYGYSNYGLDI 115
             M  +D  +WN M+A Y+ SG  + A +LF     +N      TW+++I GYS  G   
Sbjct: 286 NMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSH 345

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCF----------D 165
           EA  +F QM   G  P+  T+ +VL  C+  G   +G + H Y++K C           D
Sbjct: 346 EALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGED 405

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFP-DGKNHVAWTTMITGYSQNGYGFKAIECFR 224
            +  V   L+DMY+KC+    A  +F   P + +N V WT MI G++Q G    A++ F 
Sbjct: 406 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFV 465

Query: 225 DMRVE--GVESNQFTFPSILTACAAVSARDFGAQVHGCILS-SGFEANVY-VQSALIDMY 280
           +M  E  GV  N +T   IL ACA ++A   G Q+H  +L    ++++ Y V + LI+MY
Sbjct: 466 EMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMY 525

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
           +KCGD+D+AR + +     + +SW SM+ G+   G   EAL +F KM       DD T+ 
Sbjct: 526 SKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFL 585

Query: 341 SVL-NCFASNIDLNNAKSVHSLIVKTGF----EGYKFVNNALIDMYAKQGNLDCAF-MVF 394
            VL  C    +         S+    G     E Y +     ID+ A+ G LD A+  V 
Sbjct: 586 VVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYA----IDLLARFGRLDKAWKTVK 641

Query: 395 NLMQDKDVISWTSLITGCAYHGSYEEA 421
           ++  +   + W +L++ C  H + E A
Sbjct: 642 DMPMEPTAVVWVALLSACRVHSNVELA 668



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 113/438 (25%), Positives = 193/438 (44%), Gaps = 68/438 (15%)

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
           + ++  Y  CG  D A  +LE       V WN +I    +QG    A+++  +M     +
Sbjct: 55  TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 114

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
           +D FT P VL             + H LI   GFE   F+ NAL+ MY++ G+L+ A M+
Sbjct: 115 LDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 174

Query: 394 FNLMQDK---DVISWTSLITGCAYHGSYEEALKYFSDMRI------SGICPDHVVVSSIL 444
           F+ +  +   DVISW S+++      +   AL  FS M +      +    D + + +IL
Sbjct: 175 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL 234

Query: 445 SACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDV- 503
            AC  L  +   ++VH   +++G    + V N+L+  YAKCG + +A +VF+ M  +DV 
Sbjct: 235 PACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVV 294

Query: 504 ----------------------------------ITWTALIMGCAQNGKGKEALQFYDQM 529
                                             +TWTA+I G +Q G   EAL  + QM
Sbjct: 295 SWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQM 354

Query: 530 LARGTKPDYITFVGLLFACSHAGL--------AENARWYFESMDKVYGIKPGPDH----Y 577
           +  G+ P+ +T + +L AC+  G         A + +    ++D  +G   G D     Y
Sbjct: 355 IFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFG---GEDEDLMVY 411

Query: 578 ACMIDLLGRSGKLIEAKALLDQM-VGEPDATVWKALLSACRVHGDLELGERAANNLFEL- 635
             +ID+  +      A+++ D + + E +   W  ++     +GD       +N+  +L 
Sbjct: 412 NALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGD-------SNDALKLF 464

Query: 636 EPMNAMPYVQLSNMYSTA 653
             M + PY    N Y+ +
Sbjct: 465 VEMISEPYGVAPNAYTIS 482



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 80/331 (24%), Positives = 138/331 (41%), Gaps = 34/331 (10%)

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
           F   + +   ++  Y   G  D A +V   +     + W  LI      G  + A+    
Sbjct: 47  FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 106

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
            M  +G   DH  +  +L AC EL     G   H +   +G  S++ + N+LV +Y++CG
Sbjct: 107 RMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 166

Query: 487 CINDANRVFDSMHTR---DVITWTALIMGCAQNGKGKEALQFYDQM-LARGTKP-----D 537
            + +A+ +FD +  R   DVI+W +++    ++     AL  + +M L    KP     D
Sbjct: 167 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 226

Query: 538 YITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPGP--DHYA--CMIDLLGRSGKLI 591
            I+ V +L AC         +       +V+G  I+ G   D +    +ID   + G L+
Sbjct: 227 IISIVNILPACGSLKAVPQTK-------EVHGNAIRNGTFLDVFVGNALIDAYAKCG-LM 278

Query: 592 EAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLF-----ELEPMNAMPYVQL 646
           E    +  M+   D   W A+++     G+     +AA  LF     E  P++ + +  +
Sbjct: 279 ENAVKVFNMMEFKDVVSWNAMVAGYSQSGNF----KAAFELFKNMRKENIPLDMVTWTAV 334

Query: 647 SNMYSTAGKWEDAARVRKLMKSRGIRKEPGC 677
              YS  G   +A  V + M   G    P C
Sbjct: 335 IAGYSQRGCSHEALNVFRQMIFSG--SLPNC 363


>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
          Length = 813

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 284/745 (38%), Positives = 421/745 (56%), Gaps = 16/745 (2%)

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEA--FELFWQMQLEGYRPSQYTLD 137
           SG L  A  LF++ P  +  T++ LI  YS+      A    L+ +M      P+ YT  
Sbjct: 70  SGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFP 129

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
             L+ CS       G   H +AI      + FV T L+DMY KC C+ +A ++F   P  
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMP-A 188

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVE--GVESNQFTFPSILTACAAVSARDFGA 255
           ++ VAW  M+ GY+ +G    A+     M+++   +  N  T  ++L   A   A   G 
Sbjct: 189 RDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGT 248

Query: 256 QVHGCILSSGFEAN----------VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
            VH   + +    N          V + +AL+DMYAKCG L  ARR+ +     NEV+W+
Sbjct: 249 SVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWS 308

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIK-IDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           ++I GF       +A  LFK M A+ +  +   +  S L   AS   L   + +H+L+ K
Sbjct: 309 ALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAK 368

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
           +G        N+L+ MYAK G +D A  +F+ M  KD +S+++L++G   +G  EEA   
Sbjct: 369 SGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLV 428

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           F  M+   + PD   + S++ AC+ L  L+ G+  H   +  G  S  S+ N+L+ +YAK
Sbjct: 429 FKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAK 488

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG I+ + +VF+ M +RD+++W  +I G   +G GKEA   + +M   G  PD +TF+ L
Sbjct: 489 CGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICL 548

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L ACSH+GL    + +F  M   YG+ P  +HY CM+DLL R G L EA   +  M    
Sbjct: 549 LSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRA 608

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
           D  VW ALL ACRV+ +++LG++ +  + EL P     +V LSN+YS AG++++AA VR 
Sbjct: 609 DVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRI 668

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
           + K +G +K PGCSW+E N  +H F+  D+ HP   +IY ++D I++ IK+ GY PD +F
Sbjct: 669 IQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSF 728

Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
            L ++EEE KE  L  HSEKLA+A+G+L+L +   I + KNLRVCGDCHT +K+IS V  
Sbjct: 729 VLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKR 788

Query: 785 RHIILRDSNRFHHFKAGNCSCGDYW 809
           R II+RD+NRFHHFK G CSCGD+W
Sbjct: 789 RAIIVRDANRFHHFKNGQCSCGDFW 813



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 153/527 (29%), Positives = 250/527 (47%), Gaps = 24/527 (4%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFE--LFWQ 123
           D F    ++  Y     L +A  +F   P ++   W++++ GY+++G+   A    L  Q
Sbjct: 159 DLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQ 218

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLN----------AFVVTG 173
           MQ+   RP+  TL  +L L + +G L +G   H Y I+ C   N            + T 
Sbjct: 219 MQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTA 278

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV-E 232
           L+DMYAKC  +  A  +F   P  +N V W+ +I G+       +A   F+ M  +G+  
Sbjct: 279 LLDMYAKCGSLLYARRVFDAMP-ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCF 337

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
            +  +  S L ACA++     G Q+H  +  SG  A++   ++L+ MYAK G +D A  L
Sbjct: 338 LSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIAL 397

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
            +   + + VS+++++ G+ + G  +EA  +FKKM A +++ D  T  S++   +    L
Sbjct: 398 FDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAAL 457

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
            + +  H  ++  G      + NALIDMYAK G +D +  VFN+M  +D++SW ++I G 
Sbjct: 458 QHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGY 517

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL-TVLEFGQQVHAVFLKSGGCSS 471
             HG  +EA   F +M   G  PD V    +LSAC+    V+E     H +    G    
Sbjct: 518 GIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPR 577

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGK---GKEALQFYD 527
           +     +V + ++ G +++A     SM  R DV  W AL+  C        GK+  +   
Sbjct: 578 MEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQ 637

Query: 528 QMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
           ++   GT      FV L    S AG  + A      + KV G K  P
Sbjct: 638 ELGPEGTG----NFVLLSNIYSAAGRFDEAA-EVRIIQKVQGFKKSP 679



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 128/424 (30%), Positives = 207/424 (48%), Gaps = 15/424 (3%)

Query: 66  DGFTWNT-MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           DG    T ++  YA  G L  A+++F+  P +N  TWS+LI G+       +AF LF  M
Sbjct: 271 DGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAM 330

Query: 125 QLEGY-RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
             +G    S  ++ + LR C+    L+ GEQ H    K+    +      L+ MYAK   
Sbjct: 331 LAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGL 390

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I +A  LF      K+ V+++ +++GY QNG   +A   F+ M+   VE +  T  S++ 
Sbjct: 391 IDQAIALFDEMAV-KDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIP 449

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC+ ++A   G   HG ++  G  +   + +ALIDMYAKCG +D +R++       + VS
Sbjct: 450 ACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVS 509

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLI 362
           WN+MI G+   G  KEA +LF +M+      D  T+  +L+ C  S + +      H + 
Sbjct: 510 WNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMG 569

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGSYEEA 421
              G          ++D+ ++ G LD A+     M  + DV  W +L+  C  + + +  
Sbjct: 570 HGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLG 629

Query: 422 LKYFSDMRISGICPD----HVVVSSILSACA---ELTVLEFGQQVHAVFLKSGGCSSLSV 474
            K  S M I  + P+     V++S+I SA     E   +   Q+V   F KS GCS + +
Sbjct: 630 -KKVSRM-IQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQG-FKKSPGCSWIEI 686

Query: 475 DNSL 478
           + SL
Sbjct: 687 NGSL 690



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 77/199 (38%), Gaps = 44/199 (22%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           AL+D ++  G ID + Q+F  M  RD  +WNTMIA Y                       
Sbjct: 481 ALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYG---------------------- 518

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF----- 155
                     +GL  EA  LF +M   G+ P   T   +L  CS  GL+  G+ +     
Sbjct: 519 ---------IHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMG 569

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG---YSQ 212
           HGY +     +  ++   +VD+ ++   + EA    +  P   +   W  ++     Y  
Sbjct: 570 HGYGLTP--RMEHYIC--MVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKN 625

Query: 213 NGYGFKAIECFRDMRVEGV 231
              G K     +++  EG 
Sbjct: 626 IDLGKKVSRMIQELGPEGT 644


>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 740

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 270/676 (39%), Positives = 401/676 (59%), Gaps = 36/676 (5%)

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
           N F    L+  Y+K   + E E  F+  PD ++ V W  +I GYS +G    A++ +  M
Sbjct: 68  NLFSWNNLLLAYSKSGHLSEMERTFEKLPD-RDGVTWNVLIEGYSLSGLVGAAVKAYNTM 126

Query: 227 RVEGVESN--QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK-- 282
            ++   SN  + T  ++L   ++      G Q+HG ++  GFE+ + V S L+DMY+K  
Sbjct: 127 -MKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVG 185

Query: 283 -----------------------------CGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
                                        CG ++ A +L    E D+ VSW++MI G A+
Sbjct: 186 CISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDS-VSWSAMIKGLAQ 244

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
            G  KEA+  F++M    +K+D + + SVL        +N+ + +H+ I++T  + + +V
Sbjct: 245 NGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYV 304

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
            +ALIDMY K   L  A  VF+ M+ K+V+SWT+++ G    G   EA+K F DM+ SGI
Sbjct: 305 GSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGI 364

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
            PDH  +   +SACA ++ LE G Q H   + +G    ++V NSLV +Y KCG I+D+ R
Sbjct: 365 DPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTR 424

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGL 553
           +F+ M+ RD ++WTA++   AQ G+  EA+Q +D+M+  G KPD +T  G++ ACS AGL
Sbjct: 425 LFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGL 484

Query: 554 AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
            E  + YFE M   YGI P   HY+CMIDL  RSG++ EA   ++ M   PDA  W  LL
Sbjct: 485 VEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLL 544

Query: 614 SACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRK 673
           SACR  G+LE+G+ AA +L EL+P +   Y  LS++Y++ GKW+  A++R+ MK + +RK
Sbjct: 545 SACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRK 604

Query: 674 EPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEG 733
           EPG SW++   ++H F ++D   P    IY+K++E+   I + GY PD +F  H+VEE  
Sbjct: 605 EPGQSWIKWKGKLHSFSADDESSPYSDQIYAKLEELYQKIIDNGYKPDTSFVHHDVEEAV 664

Query: 734 KEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSN 793
           K   L  HSE+LA+AFGL+ +P G PIR+ KNLRVC DCH A K+IS+V  R I++RD+ 
Sbjct: 665 KIKMLNCHSERLAIAFGLIFVPSGLPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAV 724

Query: 794 RFHHFKAGNCSCGDYW 809
           RFH FK G CSCGD+W
Sbjct: 725 RFHRFKDGTCSCGDFW 740



 Score =  266 bits (680), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 156/495 (31%), Positives = 260/495 (52%), Gaps = 32/495 (6%)

Query: 55  AGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLD 114
           A ++F+ +   + F+WN ++ AY+ SG L E ++ F + P ++  TW+ LI GYS  GL 
Sbjct: 57  ARRVFDGIPQPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLV 116

Query: 115 IEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG 173
             A + +  M  +     ++ TL  +L+L S  G +  G+Q HG  IK  F+    V + 
Sbjct: 117 GAAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSP 176

Query: 174 LVDMYAKCKCIFEAEYLF---------------------KMFPDG--------KNHVAWT 204
           L+DMY+K  CI +A+ +F                      M  D         K+ V+W+
Sbjct: 177 LLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWS 236

Query: 205 TMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS 264
            MI G +QNG   +AIECFR+M++EG++ +Q+ F S+L AC  + A + G Q+H CI+ +
Sbjct: 237 AMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRT 296

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLF 324
             + ++YV SALIDMY KC  L  A+ + +  +  N VSW +M+VG+ + G   EA+ +F
Sbjct: 297 NLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIF 356

Query: 325 KKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
             M    I  D +T    ++  A+   L      H   +  G   Y  V+N+L+ +Y K 
Sbjct: 357 LDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKC 416

Query: 385 GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
           G++D +  +FN M  +D +SWT++++  A  G   EA++ F  M   G+ PD V ++ ++
Sbjct: 417 GDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVI 476

Query: 445 SACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LVLVYAKCGCINDANRVFDSMHTR-D 502
           SAC+   ++E GQ+   + +   G    +   S ++ ++++ G I +A    + M  R D
Sbjct: 477 SACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPD 536

Query: 503 VITWTALIMGCAQNG 517
            I WT L+  C   G
Sbjct: 537 AIGWTTLLSACRNKG 551



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/520 (24%), Positives = 235/520 (45%), Gaps = 99/520 (19%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           + + +  C  + A      +HG I+ +      ++ + ++  YA       ARR+ +   
Sbjct: 6   YSAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIP 65

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD-----IKIDDFT-----------YPS 341
             N  SWN++++ +++ G   E    F+K+  RD     + I+ ++           Y +
Sbjct: 66  QPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNT 125

Query: 342 VLNCFASNID----------------LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           ++  F+SN+                 ++  K +H  ++K GFE Y  V + L+DMY+K G
Sbjct: 126 MMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVG 185

Query: 386 NLDCAFMVFNLMQD------------------------------KDVISWTSLITGCAYH 415
            +  A  VF  + D                              KD +SW+++I G A +
Sbjct: 186 CISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQN 245

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G  +EA++ F +M+I G+  D     S+L AC  L  +  G+Q+HA  +++     + V 
Sbjct: 246 GMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVG 305

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           ++L+ +Y KC C++ A  VFD M  ++V++WTA+++G  Q G+  EA++ +  M   G  
Sbjct: 306 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGID 365

Query: 536 PDYITFVGLLFACSH-AGLAENARWYFE--------------SMDKVYGIKPGPD----- 575
           PD+ T    + AC++ + L E ++++ +              S+  +YG     D     
Sbjct: 366 PDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRL 425

Query: 576 ----------HYACMIDLLGRSGKLIEAKALLDQMVG---EPDATVWKALLSACRVHGDL 622
                      +  M+    + G+ +EA  L D+MV    +PD      ++SAC   G +
Sbjct: 426 FNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLV 485

Query: 623 ELGERAAN---NLFELEPMNAMPYVQLSNMYSTAGKWEDA 659
           E G+R      N + + P N   Y  + +++S +G+ E+A
Sbjct: 486 EKGQRYFELMINEYGIVPSNGH-YSCMIDLFSRSGRIEEA 524


>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 900

 Score =  516 bits (1329), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 268/683 (39%), Positives = 403/683 (59%), Gaps = 3/683 (0%)

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G  P   T  ++L+LC+ +  L  G   H           A   T L +MYAKC+   +A
Sbjct: 220 GSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDA 279

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE-GVESNQFTFPSILTACA 246
             +F   P  ++ VAW  ++ GY++NG    A+     M+ E G   +  T  S+L ACA
Sbjct: 280 RRVFDRMP-ARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACA 338

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
              A     +VH   +  GF+  V V +A++D+Y KCG +DSAR++ +  +  N VSWN+
Sbjct: 339 DAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNA 398

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           MI G+A  G   EAL+LFK+M    + + D +  + L+       L+  + VH L+V+ G
Sbjct: 399 MIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIG 458

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
            E    V NALI MY K    D A  VF+ +  K  +SW ++I GC  +GS E+A++ FS
Sbjct: 459 LESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFS 518

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
            M++  + PD   + SI+ A A+++     + +H   ++      + V  +L+ +YAKCG
Sbjct: 519 RMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCG 578

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
            ++ A  +F+S   R VITW A+I G   +G GK A++ +++M + G  P+  TF+ +L 
Sbjct: 579 RVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLS 638

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ACSHAGL +  + YF SM + YG++PG +HY  M+DLLGR+GKL EA + + +M  EP  
Sbjct: 639 ACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGI 698

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
           +V+ A+L AC++H ++EL E +A  +FELEP   + +V L+N+Y+ A  W+D ARVR  M
Sbjct: 699 SVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAM 758

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFAL 726
           + +G++K PG S V+  +++H F S    H    DIY+++ +++  IK  GYVPD + ++
Sbjct: 759 EKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEEIKAVGYVPDTD-SI 817

Query: 727 HNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRH 786
           H+VE++ K   L  HSEKLA+A+GL+    G  I+I KNLRVC DCH A K IS V  R 
Sbjct: 818 HDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCKDCHNATKLISLVTGRE 877

Query: 787 IILRDSNRFHHFKAGNCSCGDYW 809
           II+RD  RFHHFK G CSCGDYW
Sbjct: 878 IIMRDIQRFHHFKDGKCSCGDYW 900



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 132/404 (32%), Positives = 214/404 (52%), Gaps = 2/404 (0%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            QL  +    +      +   YA   R  +A+++F+  P ++   W++L+ GY+  GL  
Sbjct: 249 AQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAE 308

Query: 116 EAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
            A  +  +MQ E G RP   TL +VL  C+    L    + H +A++  FD    V T +
Sbjct: 309 AAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAI 368

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           +D+Y KC  +  A  +F    D +N V+W  MI GY++NG   +A+  F+ M  EGV+  
Sbjct: 369 LDVYCKCGAVDSARKVFDGMQD-RNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVT 427

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
             +  + L AC  +   D G +VH  ++  G E+NV V +ALI MY KC   D A ++ +
Sbjct: 428 DVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFD 487

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
                  VSWN+MI+G  + G  ++A+ LF +M   ++K D FT  S++   A   D   
Sbjct: 488 ELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQ 547

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
           A+ +H   ++   +   +V  ALIDMYAK G +  A  +FN  +D+ VI+W ++I G   
Sbjct: 548 ARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGS 607

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
           HGS + A++ F +M+ SG  P+     S+LSAC+   +++ GQ+
Sbjct: 608 HGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQE 651



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 183/379 (48%), Gaps = 9/379 (2%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
             ++  Y   G +  A+K+F+    +N  +W+++I GY+  G   EA  LF +M  EG  
Sbjct: 366 TAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVD 425

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            +  ++   L  C   G L  G + H   ++   + N  V+  L+ MY KCK    A  +
Sbjct: 426 VTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQV 485

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F      K  V+W  MI G +QNG    A+  F  M++E V+ + FT  SI+ A A +S 
Sbjct: 486 FDEL-GYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISD 544

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
                 +HG  +    + +VYV +ALIDMYAKCG +  AR L   +   + ++WN+MI G
Sbjct: 545 PLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHG 604

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEG 369
           +   G  K A+ LF++M +     ++ T+ SVL+ C  + +     +   S+    G E 
Sbjct: 605 YGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEP 664

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEALKYFSDM 428
                  ++D+  + G L  A+     M  +  IS + +++  C  H + E  L   S  
Sbjct: 665 GMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVE--LAEESAQ 722

Query: 429 RISGICPD----HVVVSSI 443
           RI  + P+    HV++++I
Sbjct: 723 RIFELEPEEGVYHVLLANI 741



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 114/289 (39%), Gaps = 58/289 (20%)

Query: 421 ALKYFSDMR-ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
           AL  F+ M   SG  P     +S+L  CA    L  G+ VHA     G         +L 
Sbjct: 208 ALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALA 267

Query: 480 LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR-GTKPDY 538
            +YAKC    DA RVFD M  RD + W AL+ G A+NG  + A+    +M    G +PD 
Sbjct: 268 NMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDA 327

Query: 539 ITFVGLLFACSHA-----------------------------------GLAENARWYFES 563
           +T V +L AC+ A                                   G  ++AR  F+ 
Sbjct: 328 VTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDG 387

Query: 564 MDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE----PDATVWKALLSACRVH 619
           M     +      +  MI     +G   EA AL  +MVGE     D +V  A L AC   
Sbjct: 388 MQDRNSVS-----WNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAA-LHACGEL 441

Query: 620 GDLELGERAANNLFEL------EPMNAMPYVQLSNMYSTAGKWEDAARV 662
           G L+ G R    L  +        MNA     L  MY    + + AA+V
Sbjct: 442 GFLDEGRRVHELLVRIGLESNVNVMNA-----LITMYCKCKRTDLAAQV 485



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 54/92 (58%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D+D +    +I  YA  GR+  A+ LFN    ++  TW+++I+GY ++G    A ELF +
Sbjct: 561 DQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEE 620

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
           M+  G  P++ T  +VL  CS  GL+  G+++
Sbjct: 621 MKSSGKVPNETTFLSVLSACSHAGLVDEGQEY 652


>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
          Length = 941

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 273/749 (36%), Positives = 420/749 (56%), Gaps = 6/749 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFN--ETPFKNFFTWSSLIYGYSNYGLDIEAFELF 121
           D+     N +I  YA  G L  A ++F   +   ++  +W+S++ G    G  +EA  LF
Sbjct: 196 DKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALF 255

Query: 122 WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
             MQ  G+  + YT   VL++C+  GLL  G + H   +K   +LN      L+ MYAK 
Sbjct: 256 RGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELN-IQCNALLVMYAKY 314

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
             +  A  +F    + K++++W +M++ Y QN +  +AI+ F +M   G + +     S+
Sbjct: 315 GRVDSALRVFGQIAE-KDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSL 373

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
            +A   +S  + G + H   +      ++ V + L+DMY KCG ++ + ++ E   I + 
Sbjct: 374 SSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDH 433

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           +SW +++  FA+   H EAL +  ++    I +D     S+L        ++  K VH  
Sbjct: 434 ISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCY 493

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
            ++ G      + N LID+Y + G  D +  +F  ++ KD++SWTS+I  C  +G    A
Sbjct: 494 AIRNGLLDL-ILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGA 552

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           +  F++M+ + I PD V + SIL A A L+ L  G+QVH   ++        V +SLV +
Sbjct: 553 VFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDM 612

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           Y+ CG +N A RVF+    +DV+ WTA+I     +G GK+A+  + +ML  G  PD+++F
Sbjct: 613 YSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSF 672

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
           + LL+ACSH+ L E  + Y + M   Y +KP  +HYAC++D+LGRSG+  EA   +  M 
Sbjct: 673 LALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTMP 732

Query: 602 GEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
            +P + VW ALL ACRVH +  L   AAN L ELEP N   Y+ +SN+++  GKW +A  
Sbjct: 733 MDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGKWNNAKE 792

Query: 662 VRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIM-LLIKEAGYVP 720
            R  M  RG+RK P CSW+E  + +H F S D  H     I+ K+ EI  +L +E GYV 
Sbjct: 793 TRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEMLRREGGYVE 852

Query: 721 DMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYIS 780
           D  F LH+  EE K   L  HSE++A+AFGL++   G PIRI KNLRVCGDCH   K +S
Sbjct: 853 DTRFVLHDTSEEEKIDMLHKHSERIAIAFGLISTRPGMPIRIAKNLRVCGDCHEFTKLVS 912

Query: 781 AVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            ++ R I++RD+NRFHHF  G+CSC D+W
Sbjct: 913 KLFERDIVVRDANRFHHFSGGSCSCEDFW 941



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 160/562 (28%), Positives = 290/562 (51%), Gaps = 10/562 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D DGF    ++  Y   GR+ +A++LFN  P +  F+W++L+  Y + G   EA  ++  
Sbjct: 92  DDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGA 151

Query: 124 MQLE---GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK 180
           M+     G  P   TL +VL+ C  +G  + G + HG A+K   D +  V   L+ MYAK
Sbjct: 152 MRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAK 211

Query: 181 CKCIFEAEYLFK-MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFP 239
           C  +  A  +F+ +  D ++  +W ++++G  QNG   +A+  FR M+  G   N +T  
Sbjct: 212 CGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSV 271

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
           ++L  CA +     G ++H  +L  G E N+   +AL+ MYAK G +DSA R+       
Sbjct: 272 AVLQVCAELGLLSLGRELHAALLKCGSELNIQC-NALLVMYAKYGRVDSALRVFGQIAEK 330

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           + +SWNSM+  + +  F+ EA+  F +M     + D     S+ +       LNN +  H
Sbjct: 331 DYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFH 390

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
           +  +K        V N L+DMY K G+++C+  VF  M  +D ISWT+++   A    + 
Sbjct: 391 AYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHS 450

Query: 420 EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
           EAL+   +++  GI  D +++ SIL  C  L  +   +QVH   +++ G   L ++N L+
Sbjct: 451 EALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRN-GLLDLILENRLI 509

Query: 480 LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
            +Y +CG  + +  +F  +  +D+++WT++I  C  NG+   A+  + +M     +PD +
Sbjct: 510 DIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSV 569

Query: 540 TFVGLLFACSH-AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLD 598
             V +L A +  + L +  + +   + + + I+ GP   + ++D+    G +  A  + +
Sbjct: 570 ALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIE-GPV-VSSLVDMYSGCGSMNYAIRVFE 627

Query: 599 QMVGEPDATVWKALLSACRVHG 620
           +   + D  +W A+++A  +HG
Sbjct: 628 RAKCK-DVVLWTAMINATGMHG 648



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 164/524 (31%), Positives = 257/524 (49%), Gaps = 24/524 (4%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCF---DLNAFVVTGLVDMYAKCKCIFEA 187
           P++     VL L + +     G Q H +A+ T     D + F+ T LV MY +C  + +A
Sbjct: 55  PAREHYGWVLDLVAARRAAAEGRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDA 114

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE---GVESNQFTFPSILTA 244
             LF   P  +   +W  ++  Y  +G   +A+  +  MR     G   +  T  S+L A
Sbjct: 115 RRLFNGMP-ARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKA 173

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID--NEV 302
           C A      G +VHG  +  G + +  V +ALI MYAKCG LDSA R+ E+ + D  +  
Sbjct: 174 CGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVA 233

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SWNS++ G  + G   EAL+LF+ M +    ++ +T  +VL   A    L+  + +H+ +
Sbjct: 234 SWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAAL 293

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           +K G E      NAL+ MYAK G +D A  VF  + +KD ISW S+++    +  Y EA+
Sbjct: 294 LKCGSE-LNIQCNALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAI 352

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
            +F +M   G  PDH  V S+ SA   L+ L  G++ HA  +K    + L V N+L+ +Y
Sbjct: 353 DFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMY 412

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
            KCG I  + +VF+SM  RD I+WT ++   AQ+ +  EAL+   ++   G   D +   
Sbjct: 413 IKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIG 472

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC---MIDLLGRSGKLIEAKALLDQ 599
            +L  C   GL   +          Y I+ G         +ID+ G  G+   +  L  Q
Sbjct: 473 SILETC--CGLKSIS---LLKQVHCYAIRNGLLDLILENRLIDIYGECGEFDHSLNLF-Q 526

Query: 600 MVGEPDATVWKALLSACRVHGDLELGERAANNLF-ELEPMNAMP 642
            V + D   W ++++ C  +G L      A  LF E++  N  P
Sbjct: 527 RVEKKDIVSWTSMINCCTNNGRLN----GAVFLFTEMQKANIQP 566



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/335 (23%), Positives = 144/335 (42%), Gaps = 43/335 (12%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           NR +  +   GE D +  LF+++  +D  +W +MI    N+GRL  A  LF E       
Sbjct: 506 NRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTE------- 558

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
                                   MQ    +P    L ++L   +    L +G+Q HG+ 
Sbjct: 559 ------------------------MQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFL 594

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG--KNHVAWTTMITGYSQNGYGF 217
           I+  F +   VV+ LVDMY+ C  +    Y  ++F     K+ V WT MI     +G+G 
Sbjct: 595 IRRNFPIEGPVVSSLVDMYSGCGSM---NYAIRVFERAKCKDVVLWTAMINATGMHGHGK 651

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ--SA 275
           +AI+ F+ M   G+  +  +F ++L AC+     + G      I+ S +    + +  + 
Sbjct: 652 QAIDLFKRMLQTGLTPDHVSFLALLYACSHSKLVEEGKHYLD-IMVSKYRLKPWQEHYAC 710

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKE-ALSLFKKMHARDIKI 334
           ++D+  + G  + A   ++   +D + +    ++G  R   H+   L++       +++ 
Sbjct: 711 VVDILGRSGQTEEAYEFIKTMPMDPKSAVWCALLGACR--VHRNYGLAVVAANKLLELEP 768

Query: 335 DD-FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
           D+   Y  V N FA     NNAK   + + + G  
Sbjct: 769 DNPGNYILVSNVFAEMGKWNNAKETRTRMAERGLR 803


>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
          Length = 813

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 283/745 (37%), Positives = 422/745 (56%), Gaps = 16/745 (2%)

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEA--FELFWQMQLEGYRPSQYTLD 137
           SG L  A  LF++ P  +  T++ LI  YS+      A    L+ +M      P+ YT  
Sbjct: 70  SGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFP 129

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
             L+ CS       G   H +AI      + FV T L+DMY KC C+ +A ++F   P  
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMP-A 188

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVE--GVESNQFTFPSILTACAAVSARDFGA 255
           ++ VAW  M+ GY+ +G    A+     M+++   +  N  T  ++L   A   A   G 
Sbjct: 189 RDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGT 248

Query: 256 QVHGCILSSGFEAN----------VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
            VH   + +   +N          V + +AL+DMYAKCG L  ARR+ +     NEV+W+
Sbjct: 249 SVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWS 308

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIK-IDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           ++I GF       +A  LFK M A+ +  +   +  S L   AS   L   + +H+L+ K
Sbjct: 309 ALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAK 368

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
           +G        N+L+ MYAK G +D A  +F+ M  KD +S+++L++G   +G  EEA   
Sbjct: 369 SGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLV 428

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           F  M+   + PD   + S++ AC+ L  L+ G+  H   +  G  S  S+ N+L+ +YAK
Sbjct: 429 FKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAK 488

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG I+ + +VF+ M +RD+++W  +I G   +G GKEA   + +M   G  PD +TF+ L
Sbjct: 489 CGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICL 548

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L ACSH+GL    + +F  M   YG+ P  +HY CM+DLL R G L EA   +  M    
Sbjct: 549 LSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRA 608

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
           D  VW ALL ACRV+ +++LG++ +  + EL P     +V LSN+YS AG++++AA VR 
Sbjct: 609 DVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRI 668

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
           + K +G +K PGCSW+E N  +H F+  D+ HP   +IY ++D I++ IK+ GY PD +F
Sbjct: 669 IQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSF 728

Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
            L ++EEE KE  L  HSEKLA+A+G+L+L +   I + KNLRVCGDCHT +K+IS +  
Sbjct: 729 VLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLLKR 788

Query: 785 RHIILRDSNRFHHFKAGNCSCGDYW 809
           R II+RD+NRFHHFK G CSCGD+W
Sbjct: 789 RAIIVRDANRFHHFKNGQCSCGDFW 813



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 153/527 (29%), Positives = 250/527 (47%), Gaps = 24/527 (4%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFE--LFWQ 123
           D F    ++  Y     L +A  +F   P ++   W++++ GY+++G+   A    L  Q
Sbjct: 159 DLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQ 218

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLN----------AFVVTG 173
           MQ+   RP+  TL  +L L + +G L +G   H Y I+ C   N            + T 
Sbjct: 219 MQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTA 278

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV-E 232
           L+DMYAKC  +  A  +F   P  +N V W+ +I G+       +A   F+ M  +G+  
Sbjct: 279 LLDMYAKCGSLLYARRVFDAMP-ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCF 337

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
            +  +  S L ACA++     G Q+H  +  SG  A++   ++L+ MYAK G +D A  L
Sbjct: 338 LSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIAL 397

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
            +   + + VS+++++ G+ + G  +EA  +FKKM A +++ D  T  S++   +    L
Sbjct: 398 FDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAAL 457

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
            + +  H  ++  G      + NALIDMYAK G +D +  VFN+M  +D++SW ++I G 
Sbjct: 458 QHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGY 517

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL-TVLEFGQQVHAVFLKSGGCSS 471
             HG  +EA   F +M   G  PD V    +LSAC+    V+E     H +    G    
Sbjct: 518 GIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPR 577

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGK---GKEALQFYD 527
           +     +V + ++ G +++A     SM  R DV  W AL+  C        GK+  +   
Sbjct: 578 MEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQ 637

Query: 528 QMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
           ++   GT      FV L    S AG  + A      + KV G K  P
Sbjct: 638 ELGPEGTG----NFVLLSNIYSAAGRFDEAA-EVRIIQKVQGFKKSP 679



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 128/424 (30%), Positives = 207/424 (48%), Gaps = 15/424 (3%)

Query: 66  DGFTWNT-MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           DG    T ++  YA  G L  A+++F+  P +N  TWS+LI G+       +AF LF  M
Sbjct: 271 DGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAM 330

Query: 125 QLEGY-RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
             +G    S  ++ + LR C+    L+ GEQ H    K+    +      L+ MYAK   
Sbjct: 331 LAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGL 390

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I +A  LF      K+ V+++ +++GY QNG   +A   F+ M+   VE +  T  S++ 
Sbjct: 391 IDQAIALFDEMAV-KDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIP 449

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC+ ++A   G   HG ++  G  +   + +ALIDMYAKCG +D +R++       + VS
Sbjct: 450 ACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVS 509

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLI 362
           WN+MI G+   G  KEA +LF +M+      D  T+  +L+ C  S + +      H + 
Sbjct: 510 WNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMR 569

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGSYEEA 421
              G          ++D+ ++ G LD A+     M  + DV  W +L+  C  + + +  
Sbjct: 570 HGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLG 629

Query: 422 LKYFSDMRISGICPD----HVVVSSILSACA---ELTVLEFGQQVHAVFLKSGGCSSLSV 474
            K  S M I  + P+     V++S+I SA     E   +   Q+V   F KS GCS + +
Sbjct: 630 -KKVSRM-IQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQG-FKKSPGCSWIEI 686

Query: 475 DNSL 478
           + SL
Sbjct: 687 NGSL 690



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 55/120 (45%), Gaps = 6/120 (5%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF-- 98
           AL+D ++  G ID + Q+F  M  RD  +WNTMIA Y   G  +EA  LF E     F  
Sbjct: 481 ALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPP 540

Query: 99  --FTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
              T+  L+   S+ GL IE    F  M+   G  P       ++ L S  G L    +F
Sbjct: 541 DGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEF 600


>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 823

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 279/755 (36%), Positives = 436/755 (57%), Gaps = 16/755 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETP-FKNFFTWSSLIYGYSNYGLDIEAFELFW 122
           D D    N+++  Y+  G +R A+++F+     ++  +W+++ +  +  G + EA  L  
Sbjct: 76  DADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLG 135

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQR--GEQFHGYAIKTCF-DLNAFVVTGLVDMYA 179
           +M   G RP+ +TL      C   G L R  G    G+AIKT F   +  V   L+DM+A
Sbjct: 136 EMLESGLRPNAFTLCAAAHAC-FPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFA 194

Query: 180 KCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFP 239
           +   +  A  +F    + +  V WT MIT Y Q G   KA+E F  M  +G E + +T  
Sbjct: 195 RNGDLVAARKVFNGLVE-RTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMS 253

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG---DLDSARRLLEYS 296
           S+++ACA   +   G Q+H  +L  G  ++  V   L+DMY K      ++ AR++ +  
Sbjct: 254 SMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRM 313

Query: 297 EIDNEVSWNSMIVGFARQGFHKE-ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
              N +SW ++I G+ + G  +  A+ L  +M    I+ +  TY S+L   A+  D ++ 
Sbjct: 314 PTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSG 373

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           + +H+ ++KT       V NAL+ MYA+ G ++ A   F+ + +++++S +S I      
Sbjct: 374 RQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETGRS 433

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
            +   +     D+ +S         +S+LSA A + +   GQQ+HA+ +K+G  S   + 
Sbjct: 434 NASWSSQIESMDVGVSTF-----TFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGIS 488

Query: 476 NSLVLVYAKCGCINDANRVFDSMHT-RDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
           NSLV +Y++CG ++DA R FD M    +VI+WT++I   A++G  + AL  +  M+  G 
Sbjct: 489 NSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGV 548

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAK 594
           KP+ +T++ +L ACSH GL +  + YF SM K + + P  +HYACM+DLL RSG + EA 
Sbjct: 549 KPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEAL 608

Query: 595 ALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAG 654
             +++M  + DA VWK LL ACR + ++E+GE AA ++ +LEP +  PYV LSN+Y+  G
Sbjct: 609 EFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGG 668

Query: 655 KWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIK 714
            W++ AR+R LM+ R + KE G SW+   + +H F + D  HP   +IY+K+  ++  IK
Sbjct: 669 LWDEVARIRSLMRHRNLSKETGLSWMHVGNTIHEFRAGDTSHPRAQEIYAKLAVLIREIK 728

Query: 715 EAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHT 774
           + GYVPD +  LH++ ++ KE  L  HSEK+AVAFGL+T     PIRIFKNLRVC DCH+
Sbjct: 729 DIGYVPDTSIVLHDMSDKLKEQCLLQHSEKIAVAFGLITTLPTKPIRIFKNLRVCADCHS 788

Query: 775 AMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           A+KYIS    R IILRDSNRFH  K G CSCG+YW
Sbjct: 789 AIKYISKSTGREIILRDSNRFHRMKDGKCSCGEYW 823


>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 266/613 (43%), Positives = 379/613 (61%), Gaps = 1/613 (0%)

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           +N V+WT MI+G SQN    +AI  F  MR+ G    QF F S + ACA++ + + G Q+
Sbjct: 4   RNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQM 63

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           H   L  G  + ++V S L DMY+KCG +  A ++ E     +EVSW +MI G+++ G  
Sbjct: 64  HCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEF 123

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
           +EAL  FKKM   ++ ID     S L    +       +SVHS +VK GFE   FV NAL
Sbjct: 124 EEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNAL 183

Query: 378 IDMYAKQGNLDCAFMVFNLMQD-KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
            DMY+K G+++ A  VF +  + ++V+S+T LI G       E+ L  F ++R  GI P+
Sbjct: 184 TDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPN 243

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFD 496
               SS++ ACA    LE G Q+HA  +K        V + LV +Y KCG +  A + FD
Sbjct: 244 EFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFD 303

Query: 497 SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAEN 556
            +     I W +L+    Q+G GK+A++ +++M+ RG KP+ ITF+ LL  CSHAGL E 
Sbjct: 304 EIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEE 363

Query: 557 ARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSAC 616
              YF SMDK YG+ PG +HY+C+IDLLGR+G+L EAK  +++M  EP+A  W + L AC
Sbjct: 364 GLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGAC 423

Query: 617 RVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPG 676
           R+HGD E+G+ AA  L +LEP N+   V LSN+Y+   +WED   VR  M+   ++K PG
Sbjct: 424 RIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPG 483

Query: 677 CSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEI 736
            SWV+   + H+F +ED  HP ++ IY K+D ++  IK AGYVP  +    ++++  KE 
Sbjct: 484 YSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEK 543

Query: 737 GLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFH 796
            L  HSE++AVAF L+++P G PI + KNLRVC DCH+A+K+IS V  R II+RD++RFH
Sbjct: 544 LLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFH 603

Query: 797 HFKAGNCSCGDYW 809
           HF  G+CSCGDYW
Sbjct: 604 HFTDGSCSCGDYW 616



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 121/364 (33%), Positives = 203/364 (55%), Gaps = 2/364 (0%)

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE 153
           P +N  +W+++I G S      EA   F  M++ G  P+Q+   + +R C+  G ++ G+
Sbjct: 2   PQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGK 61

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQN 213
           Q H  A+K       FV + L DMY+KC  +F+A  +F+  P  K+ V+WT MI GYS+ 
Sbjct: 62  QMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP-CKDEVSWTAMIDGYSKI 120

Query: 214 GYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
           G   +A+  F+ M  E V  +Q    S L AC A+ A  FG  VH  ++  GFE++++V 
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180

Query: 274 SALIDMYAKCGDLDSARRLLEY-SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI 332
           +AL DMY+K GD++SA  +    SE  N VS+  +I G+      ++ LS+F ++  + I
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 240

Query: 333 KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM 392
           + ++FT+ S++   A+   L     +H+ ++K  F+   FV++ L+DMY K G L+ A  
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQ 300

Query: 393 VFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV 452
            F+ + D   I+W SL++    HG  ++A+K F  M   G+ P+ +   S+L+ C+   +
Sbjct: 301 AFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGL 360

Query: 453 LEFG 456
           +E G
Sbjct: 361 VEEG 364



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 177/354 (50%), Gaps = 2/354 (0%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  + +   Y+  G + +A K+F E P K+  +W+++I GYS  G   EA   F +M  E
Sbjct: 77  FVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDE 136

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
                Q+ L + L  C      + G   H   +K  F+ + FV   L DMY+K   +  A
Sbjct: 137 EVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESA 196

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F +  + +N V++T +I GY +     K +  F ++R +G+E N+FTF S++ ACA 
Sbjct: 197 SNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACAN 256

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
            +A + G Q+H  ++   F+ + +V S L+DMY KCG L+ A +  +      E++WNS+
Sbjct: 257 QAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSL 316

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTG 366
           +  F + G  K+A+ +F++M  R +K +  T+ S+L  C  + +        +S+    G
Sbjct: 317 VSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYG 376

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYE 419
               +   + +ID+  + G L  A    N M  + +   W S +  C  HG  E
Sbjct: 377 VVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKE 430



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 139/299 (46%), Gaps = 37/299 (12%)

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
           M  ++++SWT++I+G + +  + EA++ F  MRI G  P     SS + ACA L  +E G
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
           +Q+H + LK G  S L V ++L  +Y+KCG + DA +VF+ M  +D ++WTA+I G ++ 
Sbjct: 61  KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120

Query: 517 GKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWY---------------- 560
           G+ +EAL  + +M+      D       L AC      +  R                  
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180

Query: 561 ------------FESMDKVYGIKPGPDH---YACMIDLLGRSGKLIEAKAL---LDQMVG 602
                        ES   V+GI     +   Y C+ID    + ++ +  ++   L +   
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 240

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ--LSNMYSTAGKWEDA 659
           EP+   + +L+ AC     LE G +    + ++   +  P+V   L +MY   G  E A
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKIN-FDEDPFVSSILVDMYGKCGLLEQA 298



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 77/171 (45%), Gaps = 15/171 (8%)

Query: 47  SNSGEIDEAGQLFEKMS----DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWS 102
           +N   +++  QL  ++     D D F  + ++  Y   G L +A + F+E        W+
Sbjct: 255 ANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWN 314

Query: 103 SLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT 162
           SL+  +  +GL  +A ++F +M   G +P+  T  ++L  CS  GL++ G  +  Y++  
Sbjct: 315 SLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYF-YSMDK 373

Query: 163 CFDLNAFVVTG------LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
            +     VV G      ++D+  +   + EA+      P   N   W + +
Sbjct: 374 TYG----VVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 420



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 93/227 (40%), Gaps = 25/227 (11%)

Query: 43  LVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK----N 97
           LVD +   G +++A Q F+++ D     WN++++ +   G  ++A K+F     +    N
Sbjct: 285 LVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPN 344

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
             T+ SL+ G S+ GL  E  + F+ M +  G  P +     V+ L    G L+  ++F 
Sbjct: 345 AITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFI 404

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKC-------IFEAEYLFKMFPDGKNHVAWTTMITG 209
               +  F+ NAF   G       C+           AE L K+ P  KN  A   +   
Sbjct: 405 N---RMPFEPNAF---GWCSFLGACRIHGDKEMGKLAAEKLVKLEP--KNSGALVLLSNI 456

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
           Y+      +  E  R +R+   + N    P             FGA+
Sbjct: 457 YANE----RQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAE 499


>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Vitis vinifera]
          Length = 623

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 252/592 (42%), Positives = 366/592 (61%), Gaps = 6/592 (1%)

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           +A+     M   GV ++  T+  ++  C+A  A   G +VH  I   G+E  ++V + L+
Sbjct: 38  RAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLL 97

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
           +MY K   L+ A  L +     N VSW +MI  ++ +  + +AL     M    ++ + F
Sbjct: 98  NMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNK-LNDKALKCLILMFREGVRPNMF 156

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           TY SVL        L N + +H  I+KTG E   FV +ALID+Y+K  +LD A  VF+ M
Sbjct: 157 TYSSVLRACDG---LPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEM 213

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
             +D++ W S+I G A +    EAL  F  M+ +G   D   ++S+L AC  L +LE G+
Sbjct: 214 PTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGR 273

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
           QVH   LK      L ++N+L+ +Y KCG + DAN  F  M  +DVI+W+ ++ G AQNG
Sbjct: 274 QVHVHVLKFD--QDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNG 331

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY 577
             ++AL+ ++ M   G++P+YIT +G+LFACSHAGL E   +YF SM K++G+ PG +HY
Sbjct: 332 YSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHY 391

Query: 578 ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEP 637
            C+IDLLGR+G+L EA  L+ +M  EPD+  W+ LL ACRVH +++L   AA  + ELEP
Sbjct: 392 GCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEP 451

Query: 638 MNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHP 697
            +A  Y+ LSN+Y+   +WED A VRK M +RGIRK PGCSW+E + Q+H+FI  D  HP
Sbjct: 452 EDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDTSHP 511

Query: 698 LRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQG 757
              +I  ++++++  +   GYVPD NF L ++E E KE  L YHSEKLA+ FGL+ L + 
Sbjct: 512 KIEEIVQRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSEKLAIMFGLMNLSRE 571

Query: 758 APIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             +RI KNLR+CGDCH   K +S +  R I++RD  R+HHF+ G CSCGDYW
Sbjct: 572 KTVRIRKNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCSCGDYW 623



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 136/395 (34%), Positives = 213/395 (53%), Gaps = 15/395 (3%)

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+  G      T   +++ CS +G +Q G++ H +     ++   FVV  L++MY K   
Sbjct: 46  MERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNL 105

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + EAE LF   P+ +N V+WTTMI+ YS N    KA++C   M  EGV  N FT+ S+L 
Sbjct: 106 LEEAEDLFDEMPE-RNVVSWTTMISAYS-NKLNDKALKCLILMFREGVRPNMFTYSSVLR 163

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC  +       Q+H  I+ +G E++V+V+SALID+Y+K  DLD+A  + +     + V 
Sbjct: 164 ACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVV 220

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WNS+I GFA+     EAL+LFK+M       D  T  SVL        L   + VH  ++
Sbjct: 221 WNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVL 280

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K  F+    +NNALIDMY K G+L+ A   F+ M +KDVISW++++ G A +G   +AL+
Sbjct: 281 K--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALE 338

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFG----QQVHAVFLKSGGCSSLSVDNSLV 479
            F  M+ SG  P+++ V  +L AC+   ++E G    + +  +F    G         L+
Sbjct: 339 LFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYG---CLI 395

Query: 480 LVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
            +  + G +++A ++   M    D +TW  L+  C
Sbjct: 396 DLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGAC 430



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 133/450 (29%), Positives = 228/450 (50%), Gaps = 33/450 (7%)

Query: 47  SNSGEIDEAGQLFE----KMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWS 102
           S  G + E  ++ E    K  +   F  NT++  Y     L EA+ LF+E P +N  +W+
Sbjct: 66  SARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWT 125

Query: 103 SLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT 162
           ++I  YSN  L+ +A +    M  EG RP+ +T  +VLR C     L    Q H   IKT
Sbjct: 126 TMISAYSN-KLNDKALKCLILMFREGVRPNMFTYSSVLRACD---GLPNLRQLHCGIIKT 181

Query: 163 CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIEC 222
             + + FV + L+D+Y+K   +  A  +F   P  ++ V W ++I G++QN  G +A+  
Sbjct: 182 GLESDVFVRSALIDVYSKWSDLDNALGVFDEMPT-RDLVVWNSIIGGFAQNSDGNEALNL 240

Query: 223 FRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK 282
           F+ M+  G  ++Q T  S+L AC  ++  + G QVH  +L   F+ ++ + +ALIDMY K
Sbjct: 241 FKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCK 298

Query: 283 CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
           CG L+ A          + +SW++M+ G A+ G+ ++AL LF+ M     + +  T   V
Sbjct: 299 CGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGV 358

Query: 343 LNCFA-SNIDLNNA-----KSVHSLI-VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
           L  FA S+  L        +S+  L  V  G E Y      LID+  + G LD A  + +
Sbjct: 359 L--FACSHAGLVEKGWYYFRSMKKLFGVDPGREHY----GCLIDLLGRAGRLDEAVKLIH 412

Query: 396 LMQ-DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD----HVVVSSILSACAEL 450
            M+ + D ++W +L+  C  H + + A+  ++  +I  + P+    ++++S+I +     
Sbjct: 413 EMECEPDSVTWRTLLGACRVHRNVDLAI--YAAKKIIELEPEDAGTYILLSNIYANTQRW 470

Query: 451 T-VLEFGQQV-HAVFLKSGGCSSLSVDNSL 478
             V E  + + +    K+ GCS + VD  +
Sbjct: 471 EDVAEVRKTMTNRGIRKTPGCSWIEVDKQI 500



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 159/327 (48%), Gaps = 18/327 (5%)

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           F  Q     A+     M    +  D  TY  ++ C ++   +   K VH  I   G+E  
Sbjct: 30  FCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPK 89

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY-EEALKYFSDMR 429
            FV N L++MY K   L+ A  +F+ M +++V+SWT++I+  AY     ++ALK    M 
Sbjct: 90  MFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMIS--AYSNKLNDKALKCLILMF 147

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
             G+ P+    SS+L AC  L  L   +Q+H   +K+G  S + V ++L+ VY+K   ++
Sbjct: 148 REGVRPNMFTYSSVLRACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLD 204

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
           +A  VFD M TRD++ W ++I G AQN  G EAL  + +M   G   D  T   +L AC+
Sbjct: 205 NALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACT 264

Query: 550 HAGLAENARWYFESMDKVYGIKPGPDHYA--CMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
              L E  R        V+ +K   D      +ID+  + G L +A +   +MV E D  
Sbjct: 265 GLALLELGRQV-----HVHVLKFDQDLILNNALIDMYCKCGSLEDANSAFSRMV-EKDVI 318

Query: 608 VWKALLSACRVHGDLELGERAANNLFE 634
            W  +++    +G      R A  LFE
Sbjct: 319 SWSTMVAGLAQNG----YSRQALELFE 341



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 35/172 (20%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           LN AL+D +   G +++A   F +M ++D  +W+TM+A  A +G  R             
Sbjct: 288 LNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSR------------- 334

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                             +A ELF  M+  G RP+  T+  VL  CS  GL+++G  ++ 
Sbjct: 335 ------------------QALELFESMKESGSRPNYITVLGVLFACSHAGLVEKG-WYYF 375

Query: 158 YAIKTCF--DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
            ++K  F  D        L+D+  +   + EA  L        + V W T++
Sbjct: 376 RSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLL 427


>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
 gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 288/733 (39%), Positives = 416/733 (56%), Gaps = 44/733 (6%)

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDN- 138
           + RLREA          N  +++ L+         ++A  L   M L  Y+P+   L N 
Sbjct: 4   TPRLREAIDALYSRGTANSESYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNR 63

Query: 139 VLRLCSLKGLLQRGEQ-FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           +L L +  G L      F   + +  F  NA     ++  Y+K   + +   +F      
Sbjct: 64  LLHLYAKSGNLSDARDLFDKMSRRDVFSWNA-----MLSAYSKSGNVEDLRAVFDQMS-V 117

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
            + V++ T+I G+S NG   +A+E F  M+ EG ES  +T  S+L AC+ +     G Q+
Sbjct: 118 HDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQI 177

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           HG I+++    +V+V +AL +MYAKCG LD AR L +     N VSWNSMI G+ + G  
Sbjct: 178 HGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQP 237

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
           +    LF +M +  +  D  T  ++L+                                 
Sbjct: 238 ETCTKLFCEMQSSGLMPDQVTISNILSA-------------------------------- 265

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
              Y + G +D A   F  +++KD + WT+++ GCA +G  E+AL  F +M +  + PD+
Sbjct: 266 ---YFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDN 322

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
             +SS++S+CA L  L  GQ VH   +  G    L V ++LV +Y+KCG   DA  VF  
Sbjct: 323 FTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKR 382

Query: 498 MHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENA 557
           M TR+VI+W ++I+G AQNGK  EAL  Y++ML    KPD ITFVG+L AC HAGL E  
Sbjct: 383 MLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERG 442

Query: 558 RWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACR 617
           + YF S+ K++G+ P  DHY+CMI+LLGR+G + +A  L+  M  EP+  +W  LLS CR
Sbjct: 443 QGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCR 502

Query: 618 VHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGC 677
           ++ D+  GE AA +LFEL+P NA PY+ LSN+Y+  G+W+D A VR LMK+  I+K    
Sbjct: 503 INCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFAAY 562

Query: 678 SWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIG 737
           SW+E ++QVH F++EDR H     IY +++ ++  ++E+G+ PD N  LH+V EE K   
Sbjct: 563 SWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKKLQESGFTPDTNLVLHDVVEEEKFDS 622

Query: 738 LAYHSEKLAVAFGLLTLPQG-APIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFH 796
           + YHSEKLA+AF L+  P G  PIRI KN+RVCGDCH  MK++S +  R IILRD NRFH
Sbjct: 623 ICYHSEKLALAFWLIKKPHGRTPIRIMKNIRVCGDCHVFMKFVSKIIRRPIILRDINRFH 682

Query: 797 HFKAGNCSCGDYW 809
           HF  G CSC D W
Sbjct: 683 HFIEGRCSCKDSW 695



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 153/514 (29%), Positives = 261/514 (50%), Gaps = 42/514 (8%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           NR L  ++ SG + +A  LF+KMS RD F+WN M++AY+ SG + + + +F++    +  
Sbjct: 62  NRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAV 121

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           +++++I G+S  G   +A E F +MQ EG+  + YT  +VL  CS    ++RG+Q HG  
Sbjct: 122 SYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRI 181

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           + T    + FV   L +MYAKC  + +A +LF    + KN V+W +MI+GY QNG     
Sbjct: 182 VATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVN-KNVVSWNSMISGYLQNGQPETC 240

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
            + F +M+  G+  +Q T  +IL+A                                   
Sbjct: 241 TKLFCEMQSSGLMPDQVTISNILSA----------------------------------- 265

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           Y +CG +D A +     +  ++V W +M+VG A+ G  ++AL LF++M   +++ D+FT 
Sbjct: 266 YFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTI 325

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
            SV++  A    L   ++VH   V  G +    V++AL+DMY+K G    A++VF  M  
Sbjct: 326 SSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLT 385

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ-Q 458
           ++VISW S+I G A +G   EAL  + +M    + PD++    +LSAC    ++E GQ  
Sbjct: 386 RNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGY 445

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMGCAQN- 516
            +++    G   +    + ++ +  + G ++ A  +  SM    + + W+ L+  C  N 
Sbjct: 446 FYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINC 505

Query: 517 --GKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
               G+ A +   ++      P YI    +  AC
Sbjct: 506 DVNNGEMAARHLFELDPHNAGP-YIMLSNIYAAC 538


>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 270/735 (36%), Positives = 422/735 (57%), Gaps = 2/735 (0%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           ++  Y N G L + +K+F++      F W+ L+  Y+  G   E+  LF +MQ  G   +
Sbjct: 135 LVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGN 194

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
            YT   VL+  +  G ++  ++ HGY +K  F  N  VV  L+  Y K   +  A  LF 
Sbjct: 195 CYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFD 254

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
              +  + V+W +MI G   NG+    +E F  M + GVE +  T  S+L ACA +    
Sbjct: 255 ELSE-PDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLS 313

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G  +HG  + + F   V   + L+DMY+KCG+L+ A  +         VSW S+I  + 
Sbjct: 314 LGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYV 373

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
           R+G + +A+ LF +M ++ ++ D +T  S+++  A +  L+  + VHS ++K G      
Sbjct: 374 REGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLP 433

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           V NALI+MYAK G+++ A +VF+ +  KD++SW ++I G + +    EAL+ F DM+   
Sbjct: 434 VTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQ-KQ 492

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
             PD + ++ +L ACA L  L+ G+++H   L+ G  S L V  +LV +YAKCG +  A 
Sbjct: 493 FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQ 552

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
            +FD +  +D+I+WT +I G   +G G EA+  +++M   G +PD  +F  +L ACSH+G
Sbjct: 553 LLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSG 612

Query: 553 LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
           L      +F SM    G++P  +HYAC++DLL R G L +A   ++ M  +PD T+W  L
Sbjct: 613 LLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVL 672

Query: 613 LSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIR 672
           LS CR+H D++L E+ A ++FELEP N   YV L+N+Y+ A KWE+  ++RK M+ RG +
Sbjct: 673 LSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFK 732

Query: 673 KEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEE 732
           + PGCSW+E   + +IF++ +  HP    I   + ++ + ++   Y     + L N ++ 
Sbjct: 733 QNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTMQMQNEDYSSMFRYVLINEDDM 792

Query: 733 GKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDS 792
            KE+    HSEK A+AFG+L LP G  +R+ KN RVCGDCH   K++S      I+LRDS
Sbjct: 793 EKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNRRVCGDCHEMGKFMSKTTKMEIVLRDS 852

Query: 793 NRFHHFKAGNCSCGD 807
           NRFHHFK G CSC D
Sbjct: 853 NRFHHFKDGLCSCRD 867



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 155/445 (34%), Positives = 233/445 (52%), Gaps = 4/445 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N++IAAY   G +  A  LF+E    +  +W+S+I G    G      E+F QM + G  
Sbjct: 234 NSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVE 293

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
               TL +VL  C+  G L  G   HG+ +K CF         L+DMY+KC  +  A  +
Sbjct: 294 VDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEV 353

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F    D    V+WT++I  Y + G    AI  F +M+ +GV  + +T  SI+ ACA  S+
Sbjct: 354 FVKMGD-TTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSS 412

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            D G  VH  ++ +G  +N+ V +ALI+MYAKCG ++ AR +     + + VSWN+MI G
Sbjct: 413 LDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGG 472

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           +++     EAL LF  M  +  K DD T   VL   A    L+  + +H  I++ G+   
Sbjct: 473 YSQNLLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSD 531

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
             V  AL+DMYAK G L  A ++F+++  KD+ISWT +I G   HG   EA+  F++MRI
Sbjct: 532 LHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRI 591

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAKCGCIN 489
           +GI PD    S+IL+AC+   +L  G +         G    L     +V + A+ G ++
Sbjct: 592 AGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLS 651

Query: 490 DANRVFDSMHTR-DVITWTALIMGC 513
            A +  +SM  + D   W  L+ GC
Sbjct: 652 KAYKFIESMPIKPDTTIWGVLLSGC 676



 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 164/517 (31%), Positives = 263/517 (50%), Gaps = 31/517 (5%)

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           +VL+LC+ K  L+ G++ H   I     ++  +   LV MY  C  + +   +F    + 
Sbjct: 99  SVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMND 158

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           K  + W  +++ Y++ G   +++  F+ M+  GV  N +TF  +L   AA+       +V
Sbjct: 159 KVFL-WNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRV 217

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           HG +L  GF +N  V ++LI  Y K G ++SA  L +     + VSWNSMI G    GF 
Sbjct: 218 HGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFS 277

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
              L +F +M    +++D  T  SVL   A+  +L+  +++H   VK  F      +N L
Sbjct: 278 GNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTL 337

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           +DMY+K GNL+ A  VF  M D  ++SWTS+I      G Y +A+  F +M+  G+ PD 
Sbjct: 338 LDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDI 397

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
             V+SI+ ACA  + L+ G+ VH+  +K+G  S+L V N+L+ +YAKCG + +A  VF  
Sbjct: 398 YTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSK 457

Query: 498 MHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAE-- 555
           +  +D+++W  +I G +QN    EAL+ +  M  +  KPD IT   +L AC  AGLA   
Sbjct: 458 IPVKDIVSWNTMIGGYSQNLLPNEALELFLDM-QKQFKPDDITMACVLPAC--AGLAALD 514

Query: 556 ---------NARWYFESMDKVYGIKPGPDHYAC-MIDLLGRSGKLIEAKALLDQMVGEPD 605
                      R YF  +           H AC ++D+  + G L+ A+ L D M+ + D
Sbjct: 515 KGREIHGHILRRGYFSDL-----------HVACALVDMYAKCGLLVLAQLLFD-MIPKKD 562

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
              W  +++   +HG    G  A +   E+      P
Sbjct: 563 LISWTVMIAGYGMHG---FGNEAISTFNEMRIAGIEP 596



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 122/355 (34%), Positives = 189/355 (53%), Gaps = 4/355 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           NT++  Y+  G L  A ++F +       +W+S+I  Y   GL  +A  LF +MQ +G R
Sbjct: 335 NTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVR 394

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  YT+ +++  C+    L +G   H Y IK     N  V   L++MYAKC  + EA  +
Sbjct: 395 PDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLV 454

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P  K+ V+W TMI GYSQN    +A+E F DM+ +  + +  T   +L ACA ++A
Sbjct: 455 FSKIPV-KDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAA 512

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            D G ++HG IL  G+ ++++V  AL+DMYAKCG L  A+ L +     + +SW  MI G
Sbjct: 513 LDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAG 572

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA-KSVHSLIVKTGFEG 369
           +   GF  EA+S F +M    I+ D+ ++ ++LN  + +  LN   K  +S+  + G E 
Sbjct: 573 YGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEP 632

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGSYEEALK 423
                  ++D+ A+ GNL  A+     M  K D   W  L++GC  H   + A K
Sbjct: 633 KLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEK 687



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 194/377 (51%), Gaps = 2/377 (0%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           ++ S+L  CA   + + G +VH  I+S+G   +  + + L+ MY  CGDL   R++ +  
Sbjct: 96  SYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKI 155

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
             D    WN ++  +A+ G  +E++SLFKKM    +  + +T+  VL CFA+   +   K
Sbjct: 156 MNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECK 215

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            VH  ++K GF     V N+LI  Y K G ++ A  +F+ + + DV+SW S+I GC  +G
Sbjct: 216 RVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNG 275

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
                L+ F  M I G+  D   + S+L ACA +  L  G+ +H   +K+     +   N
Sbjct: 276 FSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSN 335

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           +L+ +Y+KCG +N A  VF  M    +++WT++I    + G   +A+  +D+M ++G +P
Sbjct: 336 TLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRP 395

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           D  T   ++ AC+ +   +  R     + K  G+         +I++  + G + EA+ +
Sbjct: 396 DIYTVTSIVHACACSSSLDKGRDVHSYVIK-NGMGSNLPVTNALINMYAKCGSVEEARLV 454

Query: 597 LDQMVGEPDATVWKALL 613
             + +   D   W  ++
Sbjct: 455 FSK-IPVKDIVSWNTMI 470



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 66/170 (38%), Gaps = 33/170 (19%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           ALVD ++  G +  A  LF+ +  +D  +W  MIA Y                       
Sbjct: 537 ALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYG---------------------- 574

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
               ++G+ N     EA   F +M++ G  P + +   +L  CS  GLL  G +F     
Sbjct: 575 ----MHGFGN-----EAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMR 625

Query: 161 KTC-FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
             C  +        +VD+ A+   + +A    +  P   +   W  +++G
Sbjct: 626 NECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSG 675


>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 271/753 (35%), Positives = 425/753 (56%), Gaps = 5/753 (0%)

Query: 60  EKMSDRDGFTWNTMIAAYANS-GRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAF 118
            ++SD D     T +A Y  S   ++ A+ +F++ P  +   W+ +I  Y+  G   ++ 
Sbjct: 35  HRVSDSDAAA--TQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSI 92

Query: 119 ELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMY 178
            L+  M   G  P+ +T   +L+ CS    LQ G   H +A      ++ +V T L+ MY
Sbjct: 93  YLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMY 152

Query: 179 AKCKCIFEAEYLFKMFP-DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
           AKC  +++A+ LF       ++ VAW  MI  +S +    + I     M+  GV  N  T
Sbjct: 153 AKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSST 212

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
             SIL      +A   G  +H   + + F  NV +Q+AL+DMYAKC  L  AR++     
Sbjct: 213 LVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVN 272

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHA-RDIKIDDFTYPSVLNCFASNIDLNNAK 356
             N+V W++MI G+       +AL+L+  M     +     T  ++L   A   DL   K
Sbjct: 273 KKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGK 332

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H  ++K+G +    V N+LI MYAK G +D A    + M  KD +S++++I+GC  +G
Sbjct: 333 KLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNG 392

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
             E+AL  F  M+ SGI P    + ++L AC+ L  L+ G   H   +  G  +  S+ N
Sbjct: 393 YAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICN 452

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           +++ +Y+KCG I  +  +FD M  RD+I+W  +I+G   +G   EAL  + ++ A G KP
Sbjct: 453 AIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKP 512

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           D +T + +L ACSH+GL    +++F SM + + IKP   HY CM+DLL R+G L EA   
Sbjct: 513 DDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTF 572

Query: 597 LDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
           + +M   P+  +W ALL+ACR H ++E+GE+ +  +  L P     +V +SN+YS+ G+W
Sbjct: 573 IQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRW 632

Query: 657 EDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA 716
           +DAA +R + +  G +K PGCSWVE +  +H+FI   + HP    I  K+ E+++ +K+ 
Sbjct: 633 DDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKL 692

Query: 717 GYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAM 776
           GY  D +F LH+VEEE KE  L YHSEK+A+AFG+L     + I + KNLR+C DCH+A+
Sbjct: 693 GYRADSSFVLHDVEEEEKEQILLYHSEKVAIAFGILNTSPSSRILVTKNLRICVDCHSAI 752

Query: 777 KYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           K+I+ +  R I +RD++RFHHFK G C+C D+W
Sbjct: 753 KFITLLTEREITVRDASRFHHFKDGICNCQDFW 785



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 35/171 (20%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           A++D +S  G+I  + ++F++M +RD  +WNTMI  Y                       
Sbjct: 453 AIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYG---------------------- 490

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
                     +GL +EA  LF ++Q  G +P   TL  VL  CS  GL+  G+ +   ++
Sbjct: 491 ---------IHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFS-SM 540

Query: 161 KTCFDLNAFVV--TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
              F++   +     +VD+ A+   + EA    +  P   N   W  ++  
Sbjct: 541 SQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAA 591


>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 267/654 (40%), Positives = 407/654 (62%), Gaps = 13/654 (1%)

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
           D N F    L+  YAK   +  A  LF   P   + V++ T+I  Y++ G    A + F 
Sbjct: 71  DCNVFSFNTLISAYAKESYVEVAHQLFDEMPQ-PDSVSYNTLIAAYARRGDTQPAFQLFL 129

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
           +MR   ++ + FT   I+TAC          Q+H   + +G ++ V V +ALI  Y+K G
Sbjct: 130 EMREAFLDMDGFTLSGIITACGINVG--LIRQLHALSVVTGLDSYVSVGNALITSYSKNG 187

Query: 285 DLDSARRLLEY-SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
            L  ARR+  + SE  +EVSWNSM+V + +     +AL L+ +M  R + +D FT  SVL
Sbjct: 188 FLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVL 247

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN--LDCAFMVFNLMQDKD 401
             F +  DL      H+ ++K+G+     V + LID+Y+K G   LDC   VF+ + + D
Sbjct: 248 TAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCR-KVFDEISNPD 306

Query: 402 VISWTSLITGCA-YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
           ++ W ++I+G + Y    +EAL+ F  +++ G  PD   +  ++SAC+ ++    G+QVH
Sbjct: 307 LVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVH 366

Query: 461 AVFLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKG 519
            + LK    S+ +SV+N+L+ +Y+KCG + DA  +FD+M   + +++ ++I G AQ+G G
Sbjct: 367 GLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMG 426

Query: 520 KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC 579
            ++L  + +ML  G  P  ITF+ +L AC+H G  E+ + YF  M + +GI+P   H++C
Sbjct: 427 FQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSC 486

Query: 580 MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMN 639
           MIDLLGR+GKL EA+ L++ +  +P    W ALL ACR+HG++EL  +AAN L +L+P+N
Sbjct: 487 MIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLN 546

Query: 640 AMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLR 699
           A PYV L+N+YS  G+ +DAA VRKLM+ RG++K+PGCSW+E N ++HIF++ED  HP+ 
Sbjct: 547 AAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMI 606

Query: 700 TDIYSKIDEIMLLIKEAGYVPDMNFAL----HNVEEEGKEIGLAYHSEKLAVAFGLLTLP 755
             I   ++E+M  IK+ GY P++  AL      V +  +E+ L +HSEKLAV+FGL++  
Sbjct: 607 KKIQEYLEEMMRKIKKVGYTPEVRSALVGGDDRVWQREEELRLGHHSEKLAVSFGLMSTR 666

Query: 756 QGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +G PI +FKNLR+C DCH A+KYIS V  R I +RDS+RFH FK G CSCG YW
Sbjct: 667 EGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 145/497 (29%), Positives = 254/497 (51%), Gaps = 9/497 (1%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  L+ +S    +  A ++F+   D + F++NT+I+AYA    +  A +LF+E P  +  
Sbjct: 47  NHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSV 106

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           ++++LI  Y+  G    AF+LF +M+        +TL  ++  C +   L R  Q H  +
Sbjct: 107 SYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLIR--QLHALS 164

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           + T  D    V   L+  Y+K   + EA  +F    + ++ V+W +M+  Y Q+  G KA
Sbjct: 165 VVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKA 224

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           +E + +M V G+  + FT  S+LTA   V     G Q H  ++ SG+  N +V S LID+
Sbjct: 225 LELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDL 284

Query: 280 YAKCGD--LDSARRLLEYSEIDNEVSWNSMIVGFA-RQGFHKEALSLFKKMHARDIKIDD 336
           Y+KCG   LD  +   E S  D  V WN+MI G++  +    EAL  F+++     + DD
Sbjct: 285 YSKCGGCMLDCRKVFDEISNPD-LVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDD 343

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF-VNNALIDMYAKQGNLDCAFMVFN 395
            +   V++  ++    +  + VH L +K      +  VNNALI MY+K GNL  A  +F+
Sbjct: 344 CSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFD 403

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
            M + + +S+ S+I G A HG   ++L  F  M   G  P ++   S+L+ACA    +E 
Sbjct: 404 TMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVED 463

Query: 456 GQQVHAVFLKSGGCSSLSVDNS-LVLVYAKCGCINDANRVFDSM-HTRDVITWTALIMGC 513
           G+    +  +  G    +   S ++ +  + G +++A R+ +++        W+AL+  C
Sbjct: 464 GKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGAC 523

Query: 514 AQNGKGKEALQFYDQML 530
             +G  + A++  +++L
Sbjct: 524 RIHGNVELAIKAANRLL 540



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 129/485 (26%), Positives = 222/485 (45%), Gaps = 59/485 (12%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE--- 294
           F   L  C A      G  +H   + S    + Y+ +  + +Y+KC  L +ARR+ +   
Sbjct: 11  FRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTH 70

Query: 295 ------------------YSEIDNE----------VSWNSMIVGFARQGFHKEALSLFKK 326
                             Y E+ ++          VS+N++I  +AR+G  + A  LF +
Sbjct: 71  DCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLE 130

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
           M    + +D FT   ++     N+ L   + +H+L V TG + Y  V NALI  Y+K G 
Sbjct: 131 MREAFLDMDGFTLSGIITACGINVGL--IRQLHALSVVTGLDSYVSVGNALITSYSKNGF 188

Query: 387 LDCAFMVFN-LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
           L  A  +F+ L +D+D +SW S++     H    +AL+ + +M + G+  D   ++S+L+
Sbjct: 189 LKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLT 248

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC-GCINDANRVFDSMHTRDVI 504
           A   +  L  G Q HA  +KSG   +  V + L+ +Y+KC GC+ D  +VFD +   D++
Sbjct: 249 AFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLV 308

Query: 505 TWTALIMGCA-QNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFES 563
            W  +I G +       EAL+ + Q+   G +PD  + V ++ ACS+       R     
Sbjct: 309 LWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGR----- 363

Query: 564 MDKVYGIKPGPDHYA-------CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSAC 616
             +V+G+    D  +        +I +  + G L +AK L D M  E +   + ++++  
Sbjct: 364 --QVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTM-PEHNTVSYNSMIAGY 420

Query: 617 RVHG----DLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR-GI 671
             HG     L L +R     F   P N + ++ +    +  G+ ED      +MK + GI
Sbjct: 421 AQHGMGFQSLHLFQRMLEMGF--TPTN-ITFISVLAACAHTGRVEDGKIYFNMMKQKFGI 477

Query: 672 RKEPG 676
             E G
Sbjct: 478 EPEAG 482


>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 281/768 (36%), Positives = 420/768 (54%), Gaps = 52/768 (6%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +I  Y+    L +A  LF+    ++  +WS ++ G++  G  I  F  F ++   G R
Sbjct: 117 NKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGAR 176

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  YTL  V+R C     LQ                       LVDMY KC+ I +A +L
Sbjct: 177 PDNYTLPFVIRACRDLKNLQ---------------------MALVDMYVKCREIEDARFL 215

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F    + ++ V WT MI GY++ G   +++  F  MR EGV  ++    +++ ACA + A
Sbjct: 216 FDKMQE-RDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGA 274

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
                 +   I    F+ +V + +A+IDMYAKCG ++SAR + +  E  N +SW++MI  
Sbjct: 275 MHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAA 334

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           +   G  ++AL LF+ M +  +  D  T  S+L    +  +L   + VH+     G    
Sbjct: 335 YGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQN 394

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY------------ 418
             V N L+  Y+    LD A+ +F+ M  +D +SW+ ++ G A  G Y            
Sbjct: 395 LIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIR 454

Query: 419 ----------------EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAV 462
                            E+L  F  MR  G+ PD V + +++ ACA+L  +   + +   
Sbjct: 455 CGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDY 514

Query: 463 FLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEA 522
             +      + +  +++ ++AKCGC+  A  +FD M  ++VI+W+A+I     +G+G++A
Sbjct: 515 IQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKA 574

Query: 523 LQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMID 582
           L  +  ML  G  P+ IT V LL+ACSHAGL E    +F  M + Y ++    HY C++D
Sbjct: 575 LDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVD 634

Query: 583 LLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           LLGR+G+L EA  L++ M  E D  +W A L ACR H D+ L E+AA +L EL+P N   
Sbjct: 635 LLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGH 694

Query: 643 YVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDI 702
           Y+ LSN+Y+ AG+WED A+ R LM  R ++K PG +W+E +++ H F   D  HP   +I
Sbjct: 695 YILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEI 754

Query: 703 YSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAY-HSEKLAVAFGLLTLPQGAPIR 761
           Y  +  +   ++  GYVPD NF LH+V+EE K IG+ Y HSEKLA+AFGL+  P+  PIR
Sbjct: 755 YEMLKSLGNKLELVGYVPDTNFVLHDVDEELK-IGILYSHSEKLAIAFGLIATPEHTPIR 813

Query: 762 IFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           I KNLRVCGDCHT  K +SA+  R II+RD+NRFHHFK G CSCGDYW
Sbjct: 814 IIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 861



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 158/564 (28%), Positives = 252/564 (44%), Gaps = 87/564 (15%)

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG---KNHVAWTT 205
           L +  Q H  A       N  V   L+  Y+  + + +A  LF    DG   ++ V+W+ 
Sbjct: 94  LTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLF----DGMCVRDSVSWSV 149

Query: 206 MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
           M+ G+++ G        FR++   G   + +T P ++ AC     RD             
Sbjct: 150 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRAC-----RDLKN---------- 194

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
                 +Q AL+DMY KC +++ AR L +  +  + V+W  MI G+A  G   E+L LF+
Sbjct: 195 ------LQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 248

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           KM    +  D     +V+   A    ++ A+ +   I +  F+    +  A+IDMYAK G
Sbjct: 249 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 308

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
            ++ A  +F+ M++K+VISW+++I    YHG   +AL  F  M  SG+ PD + ++S+L 
Sbjct: 309 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 368

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
           AC     L   +QVHA     G   +L V N LV  Y+    ++DA  +FD M  RD ++
Sbjct: 369 ACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVS 428

Query: 506 WTALIMGCAQN----------------------------GKGKEALQFYDQMLARGTKPD 537
           W+ ++ G A+                             G   E+L  +D+M   G  PD
Sbjct: 429 WSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPD 488

Query: 538 YITFVGLLFACSHAGLAENARW---YFE----SMDKVYGIKPGPDHYACMIDLLGRSGKL 590
            +  V ++FAC+  G    AR    Y +     +D + G          MID+  + G +
Sbjct: 489 KVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILG--------TAMIDMHAKCGCV 540

Query: 591 IEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM--------NAMP 642
             A+ + D+M  E +   W A+++A   HG      R A +LF   PM        N + 
Sbjct: 541 ESAREIFDRM-EEKNVISWSAMIAAYGYHGQ----GRKALDLF---PMMLRSGILPNKIT 592

Query: 643 YVQLSNMYSTAGKWEDAARVRKLM 666
            V L    S AG  E+  R   LM
Sbjct: 593 LVSLLYACSHAGLVEEGLRFFSLM 616



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 147/536 (27%), Positives = 245/536 (45%), Gaps = 73/536 (13%)

Query: 13  LRCRSKIIGPARYTHN-VGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTW 70
           +RC ++   P  YT   V  + +   +L  ALVD +    EI++A  LF+KM +RD  TW
Sbjct: 171 IRCGAR---PDNYTLPFVIRACRDLKNLQMALVDMYVKCREIEDARFLFDKMQERDLVTW 227

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
             MI  YA  G+  E                 SL+              LF +M+ EG  
Sbjct: 228 TVMIGGYAECGKANE-----------------SLV--------------LFEKMREEGVV 256

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P +  +  V+  C+  G + +      Y  +  F L+  + T ++DMYAKC C+  A  +
Sbjct: 257 PDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREI 316

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F    + KN ++W+ MI  Y  +G G KA++ FR M   G+  ++ T  S+L AC     
Sbjct: 317 FDRMEE-KNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRN 375

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
                QVH      G   N+ V + L+  Y+    LD A  L +   + + VSW+ M+ G
Sbjct: 376 LTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGG 435

Query: 311 FARQGFH----------------------------KEALSLFKKMHARDIKIDDFTYPSV 342
           FA+ G +                             E+L LF KM    +  D     +V
Sbjct: 436 FAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTV 495

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV 402
           +   A    ++ A+++   I +  F+    +  A+IDM+AK G ++ A  +F+ M++K+V
Sbjct: 496 VFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNV 555

Query: 403 ISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAV 462
           ISW+++I    YHG   +AL  F  M  SGI P+ + + S+L AC+   ++E G +  ++
Sbjct: 556 ISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSL 615

Query: 463 FLKSGGCSSLSVD----NSLVLVYAKCGCINDANRVFDSMHT-RDVITWTALIMGC 513
             +     S+  D      +V +  + G +++A ++ +SM   +D   W A +  C
Sbjct: 616 MWED---YSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGAC 668



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 141/312 (45%), Gaps = 45/312 (14%)

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
           F   +++NC     +L   + VH+     G      V N LI  Y+    LD A+ +F+ 
Sbjct: 83  FYISALVNCR----NLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDG 138

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
           M  +D +SW+ ++ G A  G Y      F ++   G  PD+  +  ++ AC +L  L+  
Sbjct: 139 MCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQM- 197

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
                               +LV +Y KC  I DA  +FD M  RD++TWT +I G A+ 
Sbjct: 198 --------------------ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAEC 237

Query: 517 GKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW---YFE----SMDKVYG 569
           GK  E+L  +++M   G  PD +  V ++FAC+  G    AR    Y +     +D + G
Sbjct: 238 GKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILG 297

Query: 570 IKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAA 629
                     MID+  + G +  A+ + D+M  E +   W A+++A   HG      R A
Sbjct: 298 --------TAMIDMYAKCGCVESAREIFDRM-EEKNVISWSAMIAAYGYHGQ----GRKA 344

Query: 630 NNLFELEPMNAM 641
            +LF +   + M
Sbjct: 345 LDLFRMMLSSGM 356



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 134/292 (45%), Gaps = 25/292 (8%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N+ +  +S    +D+A  LF+ M  RD  +W+ M+  +A  G             + N F
Sbjct: 399 NKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVG------------DYMNCF 446

Query: 100 -TWSSLIYGYS---NYGLDI-----EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQ 150
            T+  LI   +   NY L       E+  LF +M+ EG  P +  +  V+  C+  G + 
Sbjct: 447 GTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMH 506

Query: 151 RGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
           +      Y  +  F L+  + T ++DM+AKC C+  A  +F    + KN ++W+ MI  Y
Sbjct: 507 KARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEE-KNVISWSAMIAAY 565

Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEAN 269
             +G G KA++ F  M   G+  N+ T  S+L AC+     + G +    +       A+
Sbjct: 566 GYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRAD 625

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEAL 321
           V   + ++D+  + G LD A +L+E   ++ +       +G  R   HK+ +
Sbjct: 626 VKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRT--HKDVV 675



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 116/283 (40%), Gaps = 37/283 (13%)

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
           T    H   EE+ K+    R++   P   +  S L  C  LT +   +QVHA     G  
Sbjct: 59  TSLNLHNREEESSKFHFLQRLN---PKFYI--SALVNCRNLTQV---RQVHAQASVHGML 110

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
            ++ V N L+  Y+    ++DA  +FD M  RD ++W+ ++ G A+ G        + ++
Sbjct: 111 ENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFREL 170

Query: 530 LARGTKPDYITFVGLLFACS-----HAGLA---------ENARWYFESMDKVYGIKPGPD 575
           +  G +PD  T   ++ AC         L          E+AR+ F+ M +   +     
Sbjct: 171 IRCGARPDNYTLPFVIRACRDLKNLQMALVDMYVKCREIEDARFLFDKMQERDLVT---- 226

Query: 576 HYACMIDLLGRSGKLIEAKALLDQMVGE---PDATVWKALLSACRVHGDLE----LGERA 628
            +  MI      GK  E+  L ++M  E   PD      ++ AC   G +     + +  
Sbjct: 227 -WTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYI 285

Query: 629 ANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
               F+L+ +     +   +MY+  G  E A  +   M+ + +
Sbjct: 286 QRKKFQLDVILGTAMI---DMYAKCGCVESAREIFDRMEEKNV 325


>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
 gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
          Length = 845

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 271/742 (36%), Positives = 409/742 (55%), Gaps = 32/742 (4%)

Query: 99  FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
           + +SSLI G+S  GL  +A  +F Q+   G  P  +T   VL  C+    L  G Q HG 
Sbjct: 105 YMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGA 164

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFK 218
            +K  F+ + FV   L+  Y +C  I     +F    + +N V+WT++I GY++ G   +
Sbjct: 165 IVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSE-RNVVSWTSLIGGYAKRGCYKE 223

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID 278
           A+  F +M   G+  N  T   +++ACA +     G QV  CI     E N  + +AL+D
Sbjct: 224 AVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVD 283

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
           MY KCG +D AR++ +     N V +N+++  + RQG  +E L++  +M     + D  T
Sbjct: 284 MYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRIT 343

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK--------------- 383
             S ++  +   D++  K  H  +++ G EG+  V NA+I+MY K               
Sbjct: 344 MLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRML 403

Query: 384 ----------------QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
                            G+++ A+ +F+ M D D++SW ++I        ++EA++ F  
Sbjct: 404 NKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRV 463

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           M+  GI  D V +  + SAC  L  L+  + +H    K      + +  +LV ++A+CG 
Sbjct: 464 MQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGD 523

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
              A +VF+ M  RDV  WTA I   A  G G  A++ +D+ML +G KPD + FV LL A
Sbjct: 524 PQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTA 583

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
            SH GL E     F SM  +YGI P   HY CM+DLLGR+G L EA +L++ M  EP+  
Sbjct: 584 LSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDV 643

Query: 608 VWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
           +W +LL+ACRVH ++++   AA  + EL+P     +V LSN+Y++AG+W+D A+VR  +K
Sbjct: 644 IWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLK 703

Query: 668 SRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALH 727
            +G  K PG S +E N ++  F + D  HP  T I   + EI   +++ GYVPD+   L 
Sbjct: 704 EKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICCRLRDIGYVPDLTNVLL 763

Query: 728 NVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHI 787
           +V E+ KE  L+ HSEKLA+AF L++  QG PIR+ KNLR+C DCH+  K +S  Y R I
Sbjct: 764 DVNEKEKEYLLSRHSEKLAIAFALISTGQGMPIRVAKNLRICSDCHSFAKLVSKSYSREI 823

Query: 788 ILRDSNRFHHFKAGNCSCGDYW 809
           I+RD+NRFH F+ G CSCGDYW
Sbjct: 824 IVRDNNRFHFFQQGFCSCGDYW 845



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 139/457 (30%), Positives = 231/457 (50%), Gaps = 39/457 (8%)

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
            H  ++++I G+S  G G+KAI  FR +   G   + FTFP +L+AC   +A   G QVH
Sbjct: 103 THYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVH 162

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
           G I+  GFE +++V+++LI  Y +CG++D  RR+ +     N VSW S+I G+A++G +K
Sbjct: 163 GAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYK 222

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           EA+SLF +M    I+ +  T   V++  A   DL   + V + I +   E    + NAL+
Sbjct: 223 EAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALV 282

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
           DMY K G +D A  +F+   DK+++ + ++++     G   E L    +M   G  PD +
Sbjct: 283 DMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRI 342

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
            + S +SAC+EL  +  G+  H   L++G     +V N+++ +Y KCG    A RVFD M
Sbjct: 343 TMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRM 402

Query: 499 HTRDVITWTALIMGCAQNGKG-------------------------------KEALQFYD 527
             +  ++W +LI G  +NG                                 KEA++ + 
Sbjct: 403 LNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFR 462

Query: 528 QMLARGTKPDYITFVGLLFACSHAGLAENARW---YFESMDKVYGIKPGPDHYACMIDLL 584
            M + G   D +T VG+  AC + G  + A+W   Y +  D  + +  G      ++D+ 
Sbjct: 463 VMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLG----TALVDMF 518

Query: 585 GRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGD 621
            R G    A  + ++MV + D + W A + A  + G+
Sbjct: 519 ARCGDPQSAMQVFNKMV-KRDVSAWTAAIGAMAMEGN 554



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 229/484 (47%), Gaps = 36/484 (7%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           +RD F  N++I  Y   G +   +++F++   +N  +W+SLI GY+  G   EA  LF++
Sbjct: 171 ERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFE 230

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M   G RP+  T+  V+  C+    LQ GEQ      +   ++NA +V  LVDMY KC  
Sbjct: 231 MVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGA 290

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I +A  +F    D KN V + T+++ Y + G   + +    +M   G   ++ T  S ++
Sbjct: 291 IDKARKIFDECVD-KNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVS 349

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC+ +     G   HG +L +G E    V +A+I+MY KCG  + A R+ +       VS
Sbjct: 350 ACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVS 409

Query: 304 WNSMIVGFARQG-------------------------------FHKEALSLFKKMHARDI 332
           WNS+I GF R G                                 KEA+ LF+ M +  I
Sbjct: 410 WNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGI 469

Query: 333 KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM 392
             D  T   V +       L+ AK +H  I K        +  AL+DM+A+ G+   A  
Sbjct: 470 TADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQ 529

Query: 393 VFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV 452
           VFN M  +DV +WT+ I   A  G+   A++ F +M   GI PD VV  ++L+A +   +
Sbjct: 530 VFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGL 589

Query: 453 LEFGQQVHAVFLKSGGCSSLSVD-NSLVLVYAKCGCINDANRVFDSMHTR--DVITWTAL 509
           +E G  +        G +  +V    +V +  + G +++A  + +SM     DVI W +L
Sbjct: 590 VEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVI-WGSL 648

Query: 510 IMGC 513
           +  C
Sbjct: 649 LAAC 652



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 127/266 (47%), Gaps = 5/266 (1%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +   G+ + A ++F++M ++   +WN++IA +  +G +  A K+F+  P  +  +W+++I
Sbjct: 386 YMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMI 445

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                  +  EA ELF  MQ EG    + T+  V   C   G L   +  HGY  K    
Sbjct: 446 GALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIH 505

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLF-KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
            +  + T LVDM+A+C     A  +F KM    ++  AWT  I   +  G G  AIE F 
Sbjct: 506 FDMHLGTALVDMFARCGDPQSAMQVFNKMVK--RDVSAWTAAIGAMAMEGNGTGAIELFD 563

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKC 283
           +M  +G++ +   F ++LTA +     + G  +   +    G          ++D+  + 
Sbjct: 564 EMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRA 623

Query: 284 GDLDSARRLLEYSEID-NEVSWNSMI 308
           G L  A  L+   +++ N+V W S++
Sbjct: 624 GLLSEALSLINSMQMEPNDVIWGSLL 649



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 112/258 (43%), Gaps = 17/258 (6%)

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTV---LEFGQQVHAVFLKSGGCSSLS 473
           +  E  +  S +  +G+    + +++++S+C E+     LE+ Q+   +F++  G     
Sbjct: 45  TMTELKQLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDNGIMGTH 104

Query: 474 -VDNSLVLVYAKCGCINDANRVFDSMH----TRDVITWTALIMGCAQNGKGKEALQFYDQ 528
            + +SL+  ++ CG    A  VF  +       D  T+  ++  C ++    E  Q +  
Sbjct: 105 YMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGA 164

Query: 529 MLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSG 588
           ++  G + D      L+      G  +  R  F+ M +   +      +  +I    + G
Sbjct: 165 IVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVS-----WTSLIGGYAKRG 219

Query: 589 KLIEAKALLDQMVG---EPDATVWKALLSACRVHGDLELGERAANNLFELE-PMNAMPYV 644
              EA +L  +MV     P++     ++SAC    DL+LGE+    + ELE  +NA+   
Sbjct: 220 CYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVN 279

Query: 645 QLSNMYSTAGKWEDAARV 662
            L +MY   G  + A ++
Sbjct: 280 ALVDMYMKCGAIDKARKI 297


>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
 gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
          Length = 796

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 270/744 (36%), Positives = 422/744 (56%), Gaps = 8/744 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N ++ AY   G +  A+  F+    KN ++W S++  Y+  G    A +L+ +M L+
Sbjct: 59  FLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRMDLQ 118

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT-CFDLNAFVVTGLVDMYAKCKCIFE 186
              P+      VL  C+    L+ G+  H     T    L+  +   L+ MYAKC  + +
Sbjct: 119 ---PNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLED 175

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A+ LF+     ++  +W  MI  Y+Q+G+  +AI  + DM    VE +  TF S+L+AC+
Sbjct: 176 AKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACS 232

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            +   D G ++H  I S G E ++ +Q+AL+ MYA+C  LD A ++ +     + VSW++
Sbjct: 233 NLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSA 292

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           MI  FA      EA+  + KM    ++ + +T+ SVL   AS  DL   ++VH  I+  G
Sbjct: 293 MIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNG 352

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
           ++       AL+D+Y   G+LD A  +F+ ++++D   WT LI G +  G     L+ + 
Sbjct: 353 YKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYR 412

Query: 427 DMRISGICP-DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
           +M+ +   P   ++ S ++SACA L      +Q H+     G  S   +  SLV +Y++ 
Sbjct: 413 EMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRW 472

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G +  A +VFD M +RD + WT LI G A++G+   AL  Y +M   G +P  +TF+ +L
Sbjct: 473 GNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVL 532

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
           +ACSHAGL E  +  F S+   Y + P   HY+C+IDLL R+G+L +A+ L++ M  EP+
Sbjct: 533 YACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPN 592

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
              W +LL A R+H D++    AA  + +L+P++   YV LSN+++  G     A VR  
Sbjct: 593 DVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNT 652

Query: 666 MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFA 725
           M +RG++K  G SW+E   Q+H F   D  HP   +I++++  +   IKEAGYVP+    
Sbjct: 653 MVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEEV 712

Query: 726 LHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLR 785
           LH+V E+ KE+ L  HSEKLA+AFGL+    G  +RIF  LR+C DCH+A+K+ISA+  R
Sbjct: 713 LHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISAIARR 772

Query: 786 HIILRDSNRFHHFKAGNCSCGDYW 809
            II+RDS+RFH F+ G CSCGDYW
Sbjct: 773 EIIVRDSSRFHKFRDGQCSCGDYW 796



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 141/476 (29%), Positives = 245/476 (51%), Gaps = 41/476 (8%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGF-TWNTMIAAYANSGRLREAKKLFNETPFKNF 98
           N  L  ++  G +++A +LFE+MS R    +WN MIAAYA SG   EA +L+ +      
Sbjct: 161 NSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYED------ 214

Query: 99  FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
                         +D+E              PS  T  +VL  CS  GLL +G + H  
Sbjct: 215 --------------MDVE--------------PSVRTFTSVLSACSNLGLLDQGRKIHAL 246

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFK 218
                 +L+  +   L+ MYA+CKC+ +A  +F+  P  ++ V+W+ MI  +++     +
Sbjct: 247 ISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPR-RDVVSWSAMIAAFAETDLFDE 305

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID 278
           AIE +  M++EGV  N +TF S+L ACA+V     G  VH  IL +G++  +   +AL+D
Sbjct: 306 AIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVD 365

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM-HARDIKIDDF 337
           +Y   G LD AR L +  E  +E  W  +I G+++QG     L L+++M +   +     
Sbjct: 366 LYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKI 425

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
            Y  V++  AS     +A+  HS I   G      +  +L++MY++ GNL+ A  VF+ M
Sbjct: 426 IYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKM 485

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
             +D ++WT+LI G A HG +  AL  + +M + G  P  +    +L AC+   + E G+
Sbjct: 486 SSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGK 545

Query: 458 QVHAVFLKSGGCSSLSVD--NSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALI 510
           Q+  + ++S      ++   + ++ + ++ G ++DA  + ++M    + +TW++L+
Sbjct: 546 QLF-ISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLL 600



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 160/357 (44%), Gaps = 47/357 (13%)

Query: 21  GPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           G A +   +GN  K       ALVD +++ G +DEA  LF+++ +RD   W  +I  Y+ 
Sbjct: 341 GRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSK 400

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
            G      +L+ E         + +IY                                V
Sbjct: 401 QGHRTGVLELYREMKNTTKVPATKIIYSC------------------------------V 430

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV-TGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           +  C+  G      Q H   I+    ++ FV+ T LV+MY++   +  A  +F      +
Sbjct: 431 ISACASLGAFADARQAHS-DIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKM-SSR 488

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           + +AWTT+I GY+++G    A+  +++M +EG E ++ TF  +L AC+    ++ G Q+ 
Sbjct: 489 DTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLF 548

Query: 259 GCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMIVGFARQGF 316
             I S      N+   S +ID+ ++ G L  A  L+    ++ N+V+W+S++ G +R   
Sbjct: 549 ISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLL-GASR--I 605

Query: 317 HKEALSLFKKMHA-----RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
           HK+   + +  HA     +   +D  +Y  + N  A   +L    SV + +V  G +
Sbjct: 606 HKD---VKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVK 659


>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
 gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
          Length = 795

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 271/744 (36%), Positives = 423/744 (56%), Gaps = 9/744 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N ++ AY   G +  A+  F+    KN ++W S++  Y+  G    A +L+ +M L+
Sbjct: 59  FLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRMDLQ 118

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT-CFDLNAFVVTGLVDMYAKCKCIFE 186
              P+      VL  C+    L+ G+  H     T    L+  +   L+ MYAKC  + +
Sbjct: 119 ---PNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLED 175

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A+ LF+    G++  +W  MI  Y+Q+G+  +AI  + DM    VE +  TF S+L+AC+
Sbjct: 176 AKRLFERM-SGRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACS 231

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            +   D G ++H  I S G E ++ +Q+AL+ MYA+C  LD A ++ +     + VSW++
Sbjct: 232 NLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSA 291

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           MI  FA      EA+  + KM    ++ + +T+ SVL   AS  DL   ++VH  I+  G
Sbjct: 292 MIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNG 351

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
           ++       AL+D+Y   G+LD A  +F+ ++++D   WT LI G +  G     L+ + 
Sbjct: 352 YKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYR 411

Query: 427 DMRISGICP-DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
           +M+ +   P   ++ S ++SACA L      +Q H+     G  S   +  SLV +Y++ 
Sbjct: 412 EMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRW 471

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G +  A +VFD M +RD + WT LI G A++G+   AL  Y +M   G +P  +TF+ +L
Sbjct: 472 GNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVL 531

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
           +ACSHAGL E  +  F S+   Y + P   HY+C+IDLL R+G+L +A+ L++ M  EP+
Sbjct: 532 YACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPN 591

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
              W +LL A R+H D++    AA  + +L+P++   YV LSN+++  G     A VR  
Sbjct: 592 DVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNT 651

Query: 666 MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFA 725
           M +RG++K  G SW+E   Q+H F   D  HP   +I++++  +   IKEAGYVP+    
Sbjct: 652 MVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPESEEV 711

Query: 726 LHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLR 785
           LH+V E+ KE+ L  HSEKLA+AFGL+    G  +RIF  LR+C DCH+A+K+ISA+  R
Sbjct: 712 LHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISAIARR 771

Query: 786 HIILRDSNRFHHFKAGNCSCGDYW 809
            II+RDS+RFH F+ G CSCGDYW
Sbjct: 772 EIIVRDSSRFHKFRDGQCSCGDYW 795



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 141/475 (29%), Positives = 245/475 (51%), Gaps = 40/475 (8%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  L  ++  G +++A +LFE+MS R   +WN MIAAYA SG   EA +L+ +       
Sbjct: 161 NSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYED------- 213

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
                        +D+E              PS  T  +VL  CS  GLL +G + H   
Sbjct: 214 -------------MDVE--------------PSVRTFTSVLSACSNLGLLDQGRKIHALI 246

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
                +L+  +   L+ MYA+CKC+ +A  +F+  P  ++ V+W+ MI  +++     +A
Sbjct: 247 SSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPR-RDVVSWSAMIAAFAETDLFDEA 305

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           IE +  M++EGV  N +TF S+L ACA+V     G  VH  IL +G++  +   +AL+D+
Sbjct: 306 IEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDL 365

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM-HARDIKIDDFT 338
           Y   G LD AR L +  E  +E  W  +I G+++QG     L L+++M +   +      
Sbjct: 366 YTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKII 425

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
           Y  V++  AS     +A+  HS I   G      +  +L++MY++ GNL+ A  VF+ M 
Sbjct: 426 YSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMS 485

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
            +D ++WT+LI G A HG +  AL  + +M + G  P  +    +L AC+   + E G+Q
Sbjct: 486 SRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQ 545

Query: 459 VHAVFLKSGGCSSLSVD--NSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALI 510
           +  + ++S      ++   + ++ + ++ G ++DA  + ++M    + +TW++L+
Sbjct: 546 LF-ISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLL 599



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 160/357 (44%), Gaps = 47/357 (13%)

Query: 21  GPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           G A +   +GN  K       ALVD +++ G +DEA  LF+++ +RD   W  +I  Y+ 
Sbjct: 340 GRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSK 399

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
            G      +L+ E         + +IY                                V
Sbjct: 400 QGHRTGVLELYREMKNTTKVPATKIIYSC------------------------------V 429

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV-TGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           +  C+  G      Q H   I+    ++ FV+ T LV+MY++   +  A  +F      +
Sbjct: 430 ISACASLGAFADARQAHS-DIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKM-SSR 487

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           + +AWTT+I GY+++G    A+  +++M +EG E ++ TF  +L AC+    ++ G Q+ 
Sbjct: 488 DTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLF 547

Query: 259 GCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMIVGFARQGF 316
             I S      N+   S +ID+ ++ G L  A  L+    ++ N+V+W+S++ G +R   
Sbjct: 548 ISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLL-GASR--I 604

Query: 317 HKEALSLFKKMHA-----RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
           HK+   + +  HA     +   +D  +Y  + N  A   +L    SV + +V  G +
Sbjct: 605 HKD---VKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVK 658


>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
 gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
 gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
          Length = 939

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 266/748 (35%), Positives = 423/748 (56%), Gaps = 5/748 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFN-ETPFKNFFTWSSLIYGYSNYGLDIEAFELFW 122
           DR     N ++  YA  G L  A ++F      ++  +W+S I G    G+ +EA +LF 
Sbjct: 195 DRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFR 254

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           +MQ +G+  + YT   VL++C+    L  G + H   +K   + N      L+ MYA+C 
Sbjct: 255 RMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFN-IQCNALLVMYARCG 313

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            +  A  +F+   D K++++W +M++ Y QN    +AI+ F +M   G   +     S+L
Sbjct: 314 WVDSALRVFREIGD-KDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLL 372

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           +A   +     G +VH   +    ++++ + + L+DMY KC  ++ + R+ +   I + V
Sbjct: 373 SAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHV 432

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SW ++I  +A+   + EA+  F+      IK+D     S+L   +    ++  K VHS  
Sbjct: 433 SWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYA 492

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           ++ G      + N +ID+Y + G +  A  +F ++  KD+++WTS++   A +G   EA+
Sbjct: 493 IRNGLLDL-ILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAV 551

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
             F  M  +GI PD V +  IL A A L+ L  G+++H   ++       +V +SLV +Y
Sbjct: 552 ALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMY 611

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
           + CG +N A +VFD    +DV+ WTA+I     +G GK+A+  + +ML  G  PD+++F+
Sbjct: 612 SGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFL 671

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
            LL+ACSH+ L +  ++Y + M   Y ++P  +HYAC++DLLGRSG+  EA   +  M  
Sbjct: 672 ALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPL 731

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
           EP + VW ALL ACR+H + EL   A + L ELEP N   YV +SN+++  GKW +   +
Sbjct: 732 EPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKWNNVKEI 791

Query: 663 RKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIM-LLIKEAGYVPD 721
           R  M  +G+RK+P CSW+E  + VH F + D  H     I+ K+ EI   L +E  YV D
Sbjct: 792 RTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLRREGQYVED 851

Query: 722 MNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISA 781
            +F LH+V EE K   L  HSE+LA++FGL++   G P+RI KNLRVCGDCH   K +S 
Sbjct: 852 TSFVLHDVSEEEKIDLLHRHSERLAISFGLISTASGTPLRIAKNLRVCGDCHEFTKLVSK 911

Query: 782 VYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           ++ R I++RD+NRFHHF  G CSCGD+W
Sbjct: 912 LFEREIVVRDANRFHHFSGGTCSCGDFW 939



 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 170/562 (30%), Positives = 293/562 (52%), Gaps = 10/562 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D  GF    ++  Y   GRL +A +LF+  P +  F+W++LI    + G   EA  ++  
Sbjct: 90  DDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRA 149

Query: 124 MQ----LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYA 179
           M+    + G  P   TL +VL+ C  +G  + G + HG A+K+  D +  V   LV MYA
Sbjct: 150 MRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYA 209

Query: 180 KCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFP 239
           KC  +  A  +F+   DG++  +W + I+G  QNG   +A++ FR M+ +G   N +T  
Sbjct: 210 KCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTV 269

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
            +L  CA ++  + G ++H  +L  G E N+   +AL+ MYA+CG +DSA R+       
Sbjct: 270 GVLQVCAELAQLNHGRELHAALLKCGTEFNIQC-NALLVMYARCGWVDSALRVFREIGDK 328

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           + +SWNSM+  + +   + EA+  F +M       D     S+L+       L N + VH
Sbjct: 329 DYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVH 388

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
           +  VK   +    + N L+DMY K  +++C+  VF+ M+ KD +SWT++I   A    Y 
Sbjct: 389 AYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYS 448

Query: 420 EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
           EA+  F   +  GI  D +++ SIL AC+ L  +   +QVH+  +++ G   L + N ++
Sbjct: 449 EAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRN-GLLDLILKNRII 507

Query: 480 LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
            +Y +CG +  A  +F+ +  +D++TWT+++   A+NG   EA+  + +ML  G +PD +
Sbjct: 508 DIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSV 567

Query: 540 TFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH-YACMIDLLGRSGKLIEAKALLD 598
             VG+L A   AGL+   +        + G  P      + ++D+    G +  A  + D
Sbjct: 568 ALVGILGAI--AGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFD 625

Query: 599 QMVGEPDATVWKALLSACRVHG 620
           +   + D  +W A+++A  +HG
Sbjct: 626 EAKCK-DVVLWTAMINATGMHG 646



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/500 (26%), Positives = 238/500 (47%), Gaps = 37/500 (7%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  LV ++  G +D A ++F ++ D+D  +WN+M++ Y  +       +L+         
Sbjct: 303 NALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQN-------RLY--------- 346

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
                           EA + F +M   G+ P    + ++L      G L  G + H YA
Sbjct: 347 ---------------AEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYA 391

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           +K   D +  +   L+DMY KC  +  +  +F      K+HV+WTT+I  Y+Q+    +A
Sbjct: 392 VKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRI-KDHVSWTTIIACYAQSSRYSEA 450

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           I  FR  + EG++ +     SIL AC+ + +     QVH   + +G   ++ +++ +ID+
Sbjct: 451 IGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGL-LDLILKNRIIDI 509

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           Y +CG++  A  + E  +  + V+W SM+  FA  G   EA++LF KM    I+ D    
Sbjct: 510 YGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVAL 569

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
             +L   A    L   K +H  +++  F     V ++L+DMY+  G+++ A  VF+  + 
Sbjct: 570 VGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKC 629

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           KDV+ WT++I     HG  ++A+  F  M  +G+ PDHV   ++L AC+   +++ G+  
Sbjct: 630 KDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFY 689

Query: 460 HAVFLKSGGCSSLSVDNSLVL-VYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNG 517
             + +            + V+ +  + G   +A +   SM      + W AL+  C  + 
Sbjct: 690 LDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHK 749

Query: 518 KGKEALQFYDQMLARGTKPD 537
             + A+   D++L    +PD
Sbjct: 750 NHELAMIATDKLLE--LEPD 767



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 147/335 (43%), Gaps = 43/335 (12%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           NR +  +   GE+  A  +FE +  +D  TW +M+  +A +G L EA  LF         
Sbjct: 504 NRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFG-------- 555

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
                                  +M   G +P    L  +L   +    L +G++ HG+ 
Sbjct: 556 -----------------------KMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFL 592

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG--KNHVAWTTMITGYSQNGYGF 217
           I+  F +   VV+ LVDMY+ C  +    Y  K+F +   K+ V WT MI     +G+G 
Sbjct: 593 IRGKFPVEGAVVSSLVDMYSGCGSM---NYALKVFDEAKCKDVVLWTAMINATGMHGHGK 649

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ--SA 275
           +AI  F+ M   GV  +  +F ++L AC+     D G + +  ++ S ++   + +  + 
Sbjct: 650 QAIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEG-KFYLDMMVSKYKLQPWQEHYAC 708

Query: 276 LIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKI 334
           ++D+  + G  + A + ++   ++   V W +++        H+ A+    K+   +++ 
Sbjct: 709 VVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKL--LELEP 766

Query: 335 DD-FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
           D+   Y  V N FA     NN K + + + + G  
Sbjct: 767 DNPGNYVLVSNVFAEMGKWNNVKEIRTKMTEQGLR 801


>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 861

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 295/779 (37%), Positives = 433/779 (55%), Gaps = 46/779 (5%)

Query: 71  NTMIAAYANSGRLREAKKLFNETP--FKNFFTWSSLIYG---YSNYGLDIEAFELFWQMQ 125
           N ++ AYA  G L  A  LF  TP   ++  +++SLI     +  +G  ++A     +  
Sbjct: 89  NALLTAYARCGDLDAALALFAATPPDLRDAVSYNSLISALCLFRRWGHALDAL----RDM 144

Query: 126 LEGYRPSQYTLDNVLRLCS-LKGLLQR-GEQFHGYAIKTCF---DLNAFVVTGLVDMYAK 180
           L  +  S +TL +VL  CS L     R G + H +A+K  F       F    L+ MYA+
Sbjct: 145 LADHEVSSFTLVSVLLACSHLADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYAR 204

Query: 181 CKCIFEAEYLFKMFPDGK---NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
              + +A+ LF  F  G    + V W TMI+   Q G   +A++   DM   GV  +  T
Sbjct: 205 LGLVDDAQRLF--FSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVT 262

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSG-FEANVYVQSALIDMYAKCGDLDSARRLLE-Y 295
           F S L AC+ +     G +VH  +L      AN +V SAL+DMYA    +  ARR+ +  
Sbjct: 263 FASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMV 322

Query: 296 SEIDNEVS-WNSMIVGFARQG-FHKEALSLFKKMHAR-DIKIDDFTYPSVLNCFASNIDL 352
            E   ++  WN+MI G+A+ G   +EA+ LF +M A       + T   VL   A +   
Sbjct: 323 PEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVF 382

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
              ++VH  +VK      +FV NAL+DMYA+ G +D A  +F ++  +D++SW +LITGC
Sbjct: 383 TGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGC 442

Query: 413 AYHGSYEEALKYFSDMRISGIC--------------------PDHVVVSSILSACAELTV 452
              G   EA +   +M++                        P+++ + ++L  CA L  
Sbjct: 443 IVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAA 502

Query: 453 LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMG 512
              G+++H   ++    S L+V ++LV +YAKCGC+  A  VFD +  R+VITW  LIM 
Sbjct: 503 PARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMA 562

Query: 513 CAQNGKGKEALQFYDQMLARG-TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIK 571
              +G G EAL  +D+M+A G   P+ +TF+  L ACSH+GL +     F+ M + YG +
Sbjct: 563 YGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFE 622

Query: 572 PGPDHYACMIDLLGRSGKLIEAKALLDQMV-GEPDATVWKALLSACRVHGDLELGERAAN 630
           P P  +AC++D+LGR+G+L EA  ++  M  GE   + W  +L ACR+H +++LG  AA 
Sbjct: 623 PTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIAAE 682

Query: 631 NLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFI 690
            LFELEP  A  YV L N+YS AG WE++  VR +M+ RG+ KEPGCSW+E +  +H F+
Sbjct: 683 RLFELEPDEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCSWIELDGAIHRFM 742

Query: 691 SEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFG 750
           + +  HP    +++ +D +   ++  GYVPD +  LH+V+E  K   L YHSEKLA+AFG
Sbjct: 743 AGESAHPESAQVHAHMDALWERMRREGYVPDTSCVLHDVDEAEKAAMLRYHSEKLAIAFG 802

Query: 751 LLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           LL  P GA IR+ KNLRVC DCH A K+IS +  R I+LRD  RFHHF+ G CSCGDYW
Sbjct: 803 LLRAPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFRDGTCSCGDYW 861



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 140/479 (29%), Positives = 224/479 (46%), Gaps = 30/479 (6%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLF--NETPFKNFFTWSSLIYGYSNYGLDIEAFELFW 122
           R+ F +N +++ YA  G + +A++LF  +     +  TW+++I      G   EA ++ +
Sbjct: 190 RERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLY 249

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIK-TCFDLNAFVVTGLVDMYAKC 181
            M   G RP   T  + L  CS   LL  G + H + +K      N+FV + LVDMYA  
Sbjct: 250 DMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASN 309

Query: 182 KCIFEAEYLFKMFPD-GKNHVAWTTMITGYSQN-GYGFKAIECFRDMRVE-GVESNQFTF 238
           + +  A  +F M P+ G+    W  MI GY+Q+ G   +AIE F  M  E G   ++ T 
Sbjct: 310 EQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTM 369

Query: 239 PSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI 298
             +L ACA          VHG ++     +N +VQ+AL+DMYA+ G +D A  +    ++
Sbjct: 370 AGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDL 429

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMH-------ARDIKIDDFTYPSVLNCFASNID 351
            + VSWN++I G   QG   EA  L ++M           +   D T      C  +NI 
Sbjct: 430 RDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNIT 489

Query: 352 L-------------NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
           L                K +H   V+   E    V +AL+DMYAK G L  A  VF+ + 
Sbjct: 490 LMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLP 549

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISG-ICPDHVVVSSILSACAELTVLEFGQ 457
            ++VI+W  LI     HG  +EAL  F  M  +G   P+ V   + L+AC+   +++ G 
Sbjct: 550 RRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGL 609

Query: 458 QVHAVFLKSGGCSSLSVDNSLVL-VYAKCGCINDANRVFDSMHT--RDVITWTALIMGC 513
           ++     +  G       ++ V+ V  + G +++A  +  SM      V  W+ ++  C
Sbjct: 610 ELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGAC 668



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 127/412 (30%), Positives = 201/412 (48%), Gaps = 37/412 (8%)

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGF--EANVYVQSALIDMYAKCGDLDSARR 291
           + F  P  + + AA+        +HG  L           V +AL+  YA+CGDLD+A  
Sbjct: 47  DHFALPPAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALA 106

Query: 292 LLEYSEID--NEVSWNSMIVG---FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCF 346
           L   +  D  + VS+NS+I     F R G    AL   + M A D ++  FT  SVL   
Sbjct: 107 LFAATPPDLRDAVSYNSLISALCLFRRWG---HALDALRDMLA-DHEVSSFTLVSVLLAC 162

Query: 347 ASNIDLNN--AKSVHSLIVKTGF--EGY-KFVNNALIDMYAKQGNLDCAFMVF--NLMQD 399
           +   D  +   +  H+  +K GF  +G  +F  NAL+ MYA+ G +D A  +F  +    
Sbjct: 163 SHLADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGV 222

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
            D+++W ++I+     G  EEA++   DM   G+ PD V  +S L AC+ L +L  G++V
Sbjct: 223 GDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREV 282

Query: 460 HAVFLKSGGCSSLS-VDNSLVLVYAKCGCINDANRVFDSM--HTRDVITWTALIMGCAQN 516
           HA  LK    ++ S V ++LV +YA    ++ A RVFD +  H R +  W A+I G AQ+
Sbjct: 283 HAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQH 342

Query: 517 -GKGKEALQFYDQMLAR-GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
            G  +EA++ + +M A  G  P   T  G+L AC+ + +       F   + V+G     
Sbjct: 343 GGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEV-------FTGKEAVHGYVVKR 395

Query: 575 DHYA------CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
           D  +       ++D+  R G++ EA  +   M+   D   W  L++ C V G
Sbjct: 396 DMASNRFVQNALMDMYARLGRMDEAHTIF-AMIDLRDIVSWNTLITGCIVQG 446


>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 934

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 265/740 (35%), Positives = 437/740 (59%), Gaps = 5/740 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N++I+ + N   + EA  +F++   ++  +W+S+I    + G   ++ E F QM+    +
Sbjct: 199 NSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAK 258

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
               T+  +L +C     L+ G   HG  +K+  + N  V   L+ MY++     +AE++
Sbjct: 259 TDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFV 318

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F    + ++ ++W +M+  +  NG   +A+E   +M      +N  TF + L+AC  +  
Sbjct: 319 FHKMRE-RDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLET 377

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
                 VH  ++  G   N+ + +AL+ MY K G + +A+R+ +     +EV+WN++I G
Sbjct: 378 LKI---VHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGG 434

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL-NNAKSVHSLIVKTGFEG 369
            A       A+  F  +    + ++  T  ++L+ F S  DL ++   +H+ IV  GFE 
Sbjct: 435 HADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFEL 494

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
             FV ++LI MYA+ G+L+ +  +F+++ +K+  +W ++++  A++G  EEALK    MR
Sbjct: 495 ETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMR 554

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
             GI  D    S   +    LT+L+ GQQ+H++ +K G  S+  V N+ + +Y KCG I+
Sbjct: 555 NDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEID 614

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
           D  R+     +R   +W  LI   A++G  ++A + + +ML  G +PD++TFV LL ACS
Sbjct: 615 DVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACS 674

Query: 550 HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
           H GL +    YF SM   +G+  G +H  C+IDLLGR+GKL EA+  +++M   P   VW
Sbjct: 675 HGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVW 734

Query: 610 KALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
           ++LL+AC++HG+LEL  +AA+ LFEL+  +   YV  SN+ ++  +W D   VRK M+S 
Sbjct: 735 RSLLAACKIHGNLELARKAADRLFELDSSDDSAYVLYSNVCASTRRWRDVENVRKQMESH 794

Query: 670 GIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNV 729
            I+K+P CSWV+  +QV  F   D+ HP   +IY+K++E+  +I+EAGY+PD +++L + 
Sbjct: 795 NIKKKPACSWVKLKNQVTTFGMGDQYHPQNAEIYAKLEELKKIIREAGYMPDTSYSLQDT 854

Query: 730 EEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIIL 789
           +EE KE  L  HSE++A+AFGL+   +G+P+RIFKNLRVCGDCH+  K +S +  R IIL
Sbjct: 855 DEEQKEHNLWNHSERIALAFGLINSSEGSPLRIFKNLRVCGDCHSVFKMVSQIIGRKIIL 914

Query: 790 RDSNRFHHFKAGNCSCGDYW 809
           RD+ RFHHF +G CSC DYW
Sbjct: 915 RDAYRFHHFSSGKCSCSDYW 934



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 152/540 (28%), Positives = 271/540 (50%), Gaps = 6/540 (1%)

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
           Y+  G +  A+ +F++ P +N  +W++L+ G+   G   +A + F  M   G RPS Y  
Sbjct: 2   YSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVA 61

Query: 137 DNVLRLCSLKGLLQRGE-QFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
            +++  C   G +  G  Q H + IK     + FV T L+  Y     + E + +FK   
Sbjct: 62  ASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIE 121

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGA 255
           +  N V+WT+++ GY+ NG   + +  +R +R +GV  N+    +++ +C  +  +  G 
Sbjct: 122 E-PNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGY 180

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           QV G ++ SG +  V V ++LI M+  C  ++ A  + +  +  + +SWNS+I      G
Sbjct: 181 QVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNG 240

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
             +++L  F +M     K D  T  ++L    S  +L   + +H ++VK+G E    V N
Sbjct: 241 HCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCN 300

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
           +L+ MY++ G  + A  VF+ M+++D+ISW S++     +G+Y  AL+   +M  +    
Sbjct: 301 SLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKAT 360

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           ++V  ++ LSAC  L  L+    VHA  +  G   +L + N+LV +Y K G +  A RV 
Sbjct: 361 NYVTFTTALSACYNLETLKI---VHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVC 417

Query: 496 DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAE 555
             M  RD +TW ALI G A N +   A++ ++ +   G   +YIT V LL A        
Sbjct: 418 KIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLL 477

Query: 556 NARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
           +      +   V G +      + +I +  + G L  +  + D ++   +++ W A+LSA
Sbjct: 478 DHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFD-VLANKNSSTWNAILSA 536



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 158/592 (26%), Positives = 280/592 (47%), Gaps = 41/592 (6%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F   +++  Y   G + E   +F E    N  +W+SL+ GY+  G   E   ++ +++
Sbjct: 93  DVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLR 152

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            +G   ++  +  V+R C +      G Q  G  IK+  D    V   L+ M+  C  I 
Sbjct: 153 RDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIE 212

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           EA  +F    + ++ ++W ++IT    NG+  K++E F  MR    +++  T  ++L  C
Sbjct: 213 EASCVFDDMKE-RDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVC 271

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
            +     +G  +HG ++ SG E+NV V ++L+ MY++ G  + A  +       + +SWN
Sbjct: 272 GSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWN 331

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVK 364
           SM+      G +  AL L  +M       +  T+ + L+ C+    +L   K VH+ ++ 
Sbjct: 332 SMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACY----NLETLKIVHAFVIL 387

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            G      + NAL+ MY K G++  A  V  +M D+D ++W +LI G A +     A++ 
Sbjct: 388 LGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEA 447

Query: 425 FSDMRISGICPDHVVVSSILSA-CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
           F+ +R  G+  +++ + ++LSA  +   +L+ G  +HA  + +G      V +SL+ +YA
Sbjct: 448 FNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYA 507

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF-V 542
           +CG +N +N +FD +  ++  TW A++   A  G G+EAL+   +M   G   D  +F V
Sbjct: 508 QCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSV 567

Query: 543 GLLFACSHAGLAENARWY-------FES-----------------MDKVYGIKPGP---- 574
                 +   L E  + +       FES                 +D V+ I P P    
Sbjct: 568 AHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRS 627

Query: 575 -DHYACMIDLLGRSGKLIEAKALLDQMVG---EPDATVWKALLSACRVHGDL 622
              +  +I  L R G   +A+    +M+     PD   + +LLSAC  HG L
Sbjct: 628 QRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACS-HGGL 678



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/484 (27%), Positives = 244/484 (50%), Gaps = 25/484 (5%)

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           MY+K   I  A+++F   P+ +N  +W  +++G+ + G+  KA++ F  M   GV  + +
Sbjct: 1   MYSKFGSIEHAQHVFDKMPE-RNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSY 59

Query: 237 TFPSILTACAAVSARDFGA-QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
              S++TAC        GA QVH  ++  G   +V+V ++L+  Y   G +     + + 
Sbjct: 60  VAASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKE 119

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
            E  N VSW S++VG+A  G  KE +S+++++    +  ++    +V+      +D    
Sbjct: 120 IEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLG 179

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
             V   ++K+G +    V N+LI M+    +++ A  VF+ M+++D ISW S+IT   ++
Sbjct: 180 YQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHN 239

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G  E++L+YFS MR +    D++ +S++L  C     L +G+ +H + +KSG  S++ V 
Sbjct: 240 GHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVC 299

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           NSL+ +Y++ G   DA  VF  M  RD+I+W +++     NG    AL+   +ML     
Sbjct: 300 NSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKA 359

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPGPDHYA----CMIDLLGRSGK 589
            +Y+TF   L AC          +  E++  V+   I  G  H       ++ + G+ G 
Sbjct: 360 TNYVTFTTALSAC----------YNLETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGS 409

Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP--YVQLS 647
           +  A+ +  +++ + D   W AL+     H D +    AA   F L     +P  Y+ + 
Sbjct: 410 MAAAQRVC-KIMPDRDEVTWNALIGG---HADNK-EPNAAIEAFNLLREEGVPVNYITIV 464

Query: 648 NMYS 651
           N+ S
Sbjct: 465 NLLS 468



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 127/274 (46%), Gaps = 11/274 (4%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           + F  +++I  YA  G L  +  +F+    KN  TW++++   ++YG   EA +L  +M+
Sbjct: 495 ETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMR 554

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            +G    Q++      +     LL  G+Q H   IK  F+ N +V+   +DMY KC    
Sbjct: 555 NDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCG--- 611

Query: 186 EAEYLFKMFPD--GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           E + +F++ P    ++  +W  +I+  +++G+  +A E F +M   G+  +  TF S+L+
Sbjct: 612 EIDDVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLS 671

Query: 244 ACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI-DNE 301
           AC+     D G      + +  G    +     +ID+  + G L  A   +    +   +
Sbjct: 672 ACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTD 731

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           + W S++      G     L L +K   R  ++D
Sbjct: 732 LVWRSLLAACKIHG----NLELARKAADRLFELD 761



 Score = 46.2 bits (108), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 34/169 (20%), Positives = 71/169 (42%), Gaps = 7/169 (4%)

Query: 52  IDEAGQLFEKMS----DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYG 107
           +DE  QL   +     + + +  N  +  Y   G + +  ++  +   ++  +W+ LI  
Sbjct: 578 LDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISA 637

Query: 108 YSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLN 167
            + +G   +A E F +M   G RP   T  ++L  CS  GL+  G  +   ++ T F + 
Sbjct: 638 LARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFS-SMSTKFGVP 696

Query: 168 AFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
             +     ++D+  +   + EAE      P     + W +++     +G
Sbjct: 697 TGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACKIHG 745


>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 975

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 275/748 (36%), Positives = 432/748 (57%), Gaps = 6/748 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N +IA Y   G +  A K+F++ P +N  +W+S++Y     G+  E++ LF  + 
Sbjct: 230 DVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLL 289

Query: 126 L--EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
              EG  P   T+  V+ LC+ +G ++ G  FHG A+K        V + L+DMY+KC  
Sbjct: 290 NGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGY 349

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSIL 242
           + EA  LF    + KN ++W +MI GYS++     A E  R M++E  V+ N+ T  ++L
Sbjct: 350 LCEARVLFD--TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVL 407

Query: 243 TACAAVSARDFGAQVHGCILSSGF-EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
             C          ++HG  L  GF +++  V +A +  YAKCG L  A  +    E    
Sbjct: 408 PVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMV 467

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
            SWN++I G  + GF ++AL L+  M    ++ D FT  S+L+  A    L+  K +H  
Sbjct: 468 SSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGS 527

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           +++ GFE  +F+  +L+ +Y + G +  A + F+ M++K+++ W ++I G + +    +A
Sbjct: 528 MLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDA 587

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           L  F  M  S I PD + +   L AC++++ L  G+++H   +KS       V  SL+ +
Sbjct: 588 LDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDM 647

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           YAKCGC+  +  +FD +H +  +TW  LI G   +G G++A++ +  M   G +PD +TF
Sbjct: 648 YAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTF 707

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
           + LL AC+HAGL      Y   M  ++GIKP  +HYAC++D+LGR+G+L EA  L++++ 
Sbjct: 708 IALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELP 767

Query: 602 GEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
            +PD+ +W +LLS+CR + DL++GE+ AN L EL P  A  YV +SN Y+  GKW++  +
Sbjct: 768 DKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRK 827

Query: 662 VRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPD 721
           +R+ MK  G++K+ GCSW+E   +V  F+  D        I     E+   I + GY PD
Sbjct: 828 MRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDESLLQSMKIQQTWIELEKKINKIGYKPD 887

Query: 722 MNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISA 781
            +  LH +EE+ K   L  HSEKLA++FGLL   +G  +R+ KNLR+C DCH A+K +S 
Sbjct: 888 TSCVLHELEEDEKIKILRNHSEKLAISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSK 947

Query: 782 VYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +  R II+RD+ RFHHFK G CSCGDYW
Sbjct: 948 IDKREIIVRDNKRFHHFKNGFCSCGDYW 975



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 166/541 (30%), Positives = 274/541 (50%), Gaps = 17/541 (3%)

Query: 89  LFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQYTLDNVLRLCSLKG 147
           +FN +  KN F W++L+ GY    L  +A  +F +M  L  + P  +TL  V++ C    
Sbjct: 151 VFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVY 210

Query: 148 LLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
            ++ GE  HG+A+KT    + FV   L+ MY K   +  A  +F   P  +N V+W +++
Sbjct: 211 DVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQ-RNLVSWNSVM 269

Query: 208 TGYSQNGYGFKAIECFRDMRV--EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
               +NG   ++   F+ +    EG+  +  T  +++  CA       G   HG  L  G
Sbjct: 270 YACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLG 329

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
               + V S+L+DMY+KCG L  AR L + +E  N +SWNSMI G+++    + A  L +
Sbjct: 330 LCGELKVNSSLLDMYSKCGYLCEARVLFDTNE-KNVISWNSMIGGYSKDRDFRGAFELLR 388

Query: 326 KMHARD-IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF-EGYKFVNNALIDMYAK 383
           KM   D +K+++ T  +VL      I     K +H   ++ GF +  + V NA +  YAK
Sbjct: 389 KMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAK 448

Query: 384 QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSI 443
            G+L  A  VF  M+ K V SW +LI G   +G   +AL  +  MR SG+ PD   ++S+
Sbjct: 449 CGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASL 508

Query: 444 LSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDV 503
           LSACA L  L  G+++H   L++G      +  SLV +Y +CG I  A   FD+M  +++
Sbjct: 509 LSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNL 568

Query: 504 ITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFES 563
           + W  +I G +QN    +AL  + QML+    PD I+ +G L ACS        +     
Sbjct: 569 VCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKEL--- 625

Query: 564 MDKVYGIKPGPDHYA----CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVH 619
               + +K     ++     +ID+  + G + +++ + D++  + + T W  L++   +H
Sbjct: 626 --HCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVT-WNVLITGYGIH 682

Query: 620 G 620
           G
Sbjct: 683 G 683



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 146/497 (29%), Positives = 239/497 (48%), Gaps = 21/497 (4%)

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGY-AIKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
           +P Q  +  +L+LC     ++ G + H + +    F  +  ++T LV MY+ C   +++ 
Sbjct: 91  KPKQL-IGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSC 149

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM--RVEGVESNQFTFPSILTACA 246
            +F      KN   W  +++GY +N     A+  F +M    E V  N FT P ++ AC 
Sbjct: 150 LVFNA-SRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDN-FTLPCVIKACV 207

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            V     G  VHG  L +   ++V+V +ALI MY K G ++SA ++ +     N VSWNS
Sbjct: 208 GVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNS 267

Query: 307 MIVGFARQGFHKEALSLFKKMHARD--IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           ++      G  +E+  LFK +   D  +  D  T  +V+   A   ++      H L +K
Sbjct: 268 VMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALK 327

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            G  G   VN++L+DMY+K G L  A ++F+   +K+VISW S+I G +    +  A + 
Sbjct: 328 LGLCGELKVNSSLLDMYSKCGYLCEARVLFD-TNEKNVISWNSMIGGYSKDRDFRGAFEL 386

Query: 425 FSDMRISG-ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS-VDNSLVLVY 482
              M++   +  + V + ++L  C E       +++H   L+ G   S   V N+ V  Y
Sbjct: 387 LRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGY 446

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
           AKCG ++ A  VF  M ++ V +W ALI G  QNG  ++AL  Y  M   G +PD  T  
Sbjct: 447 AKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIA 506

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPG--PDHYAC--MIDLLGRSGKLIEAKALLD 598
            LL AC+        +    SM     ++ G   D + C  ++ L  + GK++ AK   D
Sbjct: 507 SLLSACARLKSLSCGKEIHGSM-----LRNGFELDEFICISLVSLYVQCGKILLAKLFFD 561

Query: 599 QMVGEPDATVWKALLSA 615
            M  E +   W  +++ 
Sbjct: 562 NM-EEKNLVCWNTMING 577



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 129/255 (50%), Gaps = 3/255 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G +     + D F   ++++ Y   G++  AK  F+    KN   W+++I G+S      
Sbjct: 526 GSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPF 585

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           +A ++F QM      P + ++   L  CS    L+ G++ H +A+K+    ++FV   L+
Sbjct: 586 DALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLI 645

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMYAKC C+ +++ +F      K  V W  +ITGY  +G+G KAIE F+ M+  G   + 
Sbjct: 646 DMYAKCGCMEQSQNIFDRV-HLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDS 704

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLL- 293
            TF ++LTAC        G +  G + S  G +  +   + ++DM  + G L+ A  L+ 
Sbjct: 705 VTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVN 764

Query: 294 EYSEIDNEVSWNSMI 308
           E  +  +   W+S++
Sbjct: 765 ELPDKPDSRIWSSLL 779



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 43/195 (22%), Positives = 79/195 (40%), Gaps = 41/195 (21%)

Query: 20  IGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYA 78
           +G   +   V + +   S +  +L+D ++  G ++++  +F+++  +   TWN +I  Y 
Sbjct: 621 LGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYG 680

Query: 79  NSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDN 138
             G  R                               +A ELF  MQ  G+RP   T   
Sbjct: 681 IHGHGR-------------------------------KAIELFKSMQNAGFRPDSVTFIA 709

Query: 139 VLRLCSLKGLLQRGEQFHG-----YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKM 193
           +L  C+  GL+  G ++ G     + IK   +  A V    VDM  +   + EA  L   
Sbjct: 710 LLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACV----VDMLGRAGRLNEALELVNE 765

Query: 194 FPDGKNHVAWTTMIT 208
            PD  +   W+++++
Sbjct: 766 LPDKPDSRIWSSLLS 780



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 40/190 (21%), Positives = 84/190 (44%), Gaps = 10/190 (5%)

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDS 497
           ++  +L  C E   +E G+++H     S    + + +   LV +Y+ C    D+  VF++
Sbjct: 95  LIGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNA 154

Query: 498 MHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT-KPDYITFVGLLFACS---HAGL 553
              +++  W AL+ G  +N   ++A+  + +M++     PD  T   ++ AC       L
Sbjct: 155 SRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRL 214

Query: 554 AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
            E    +      +  +  G      +I + G+ G +  A  + D+M  + +   W +++
Sbjct: 215 GEAVHGFALKTKVLSDVFVG----NALIAMYGKFGFVESAVKVFDKM-PQRNLVSWNSVM 269

Query: 614 SACRVHGDLE 623
            AC  +G  E
Sbjct: 270 YACLENGVFE 279


>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
          Length = 824

 Score =  512 bits (1319), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 282/772 (36%), Positives = 431/772 (55%), Gaps = 60/772 (7%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           NRA+     +G + +A +LF  M  R   T+NTM+A YA +GRL +A   F   P  + F
Sbjct: 111 NRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIPRPDSF 170

Query: 100 TWSSLIY--GYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
           ++++L++  G S+   D+ A                                     F  
Sbjct: 171 SYNTLLHALGVSSSLADVRAL------------------------------------FDE 194

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
             +K     N  + +     +A    +  A + F + P+ K+ V+W  M+  Y +NG   
Sbjct: 195 MPVKDSVSYNVMISS-----HANHGLVSLARHYFDLAPE-KDAVSWNGMLAAYVRNGRIQ 248

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           +A E F D R E    +  ++ +++      S  +   +    + +   + +V   + ++
Sbjct: 249 EARELF-DSRTEW---DAISWNALMAGYVQRSQIEEAQK----MFNKMPQRDVVSWNTMV 300

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
             YA+ GD+  ARRL + + I +  +W +++ G+A+ G  +EA  +F  M  ++      
Sbjct: 301 SGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPDKNA----V 356

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           ++ +++  +     +  AK +   +       +    N ++  YA+ G LD A  +F +M
Sbjct: 357 SWNAMMAAYVQRRMMEEAKELFDAMPCRNVASW----NTMLTGYAQAGMLDEARAIFGMM 412

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
             KD +SW +++   +  G  EE L+ F +M   G   +    + +LS CA++  LE G 
Sbjct: 413 PQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGM 472

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
           Q+H+  +K+G      V N+L+ +Y KCG + +A+  F+ M  RDV++W  +I G A++G
Sbjct: 473 QLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHG 532

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY 577
            GKEAL+ +D M    TKPD IT VG+L ACSH+GL E    YF SM + +G+   P+HY
Sbjct: 533 FGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHY 592

Query: 578 ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEP 637
            CMIDLLGR+G+L EA  L+  M  EPD+T+W ALL A R+H + ELG  AA  +FELEP
Sbjct: 593 TCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEP 652

Query: 638 MNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHP 697
            NA  YV LSN+Y+++GKW D  ++R +M  RG++K PG SW+E  ++VH F   D  HP
Sbjct: 653 ENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHP 712

Query: 698 LRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQG 757
            R DIY+ ++++ + +K+AGYV   +  LH+VEEE KE  L YHSEKLAVA+G+L +P G
Sbjct: 713 EREDIYAFLEDLDIRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILKIPPG 772

Query: 758 APIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            PIR+ KNLRVC DCHTA K ISA+  R IILRDSNRFHHF+ G+CSCGDYW
Sbjct: 773 RPIRVIKNLRVCRDCHTAFKCISAIEGRLIILRDSNRFHHFRDGSCSCGDYW 824



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 194/420 (46%), Gaps = 44/420 (10%)

Query: 34  KPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNET 93
           K A   N  L  +  +G I EA +LF+  ++ D  +WN ++A Y    ++ EA+K+FN+ 
Sbjct: 229 KDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKM 288

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELF----------WQMQLEGYRPSQYTLDNVLRL- 142
           P ++  +W++++ GY+  G   EA  LF          W   + GY      L+   R+ 
Sbjct: 289 PQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSGY-AQNGMLEEAKRVF 347

Query: 143 ------------CSLKGLLQR------GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
                         +   +QR       E F     +     N  ++TG    YA+   +
Sbjct: 348 DAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNT-MLTG----YAQAGML 402

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            EA  +F M P  K+ V+W  M+  YSQ G+  + ++ F++M   G   N+  F  +L+ 
Sbjct: 403 DEARAIFGMMPQ-KDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLST 461

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           CA ++A + G Q+H  ++ +G+    +V +AL+ MY KCG ++ A    E  E  + VSW
Sbjct: 462 CADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSW 521

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIV 363
           N+MI G+AR GF KEAL +F  M     K DD T   VL  C  S +        +S+  
Sbjct: 522 NTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHR 581

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD----KDVISWTSLITGCAYHGSYE 419
             G          +ID+  + G LD A    NLM+D     D   W +L+     H + E
Sbjct: 582 DFGVATKPEHYTCMIDLLGRAGRLDEA---VNLMKDMPFEPDSTMWGALLGASRIHRNSE 638



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 127/506 (25%), Positives = 234/506 (46%), Gaps = 42/506 (8%)

Query: 34  KPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNET 93
           +  S  N  L  ++ +G + +A   F  +   D F++NT++ A   S  L + + LF+E 
Sbjct: 136 RSTSTYNTMLAGYAANGRLPQALSFFRSIPRPDSFSYNTLLHALGVSSSLADVRALFDEM 195

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE 153
           P K+  +++ +I  ++N+GL +     ++ +  E       + + +L      G +Q   
Sbjct: 196 PVKDSVSYNVMISSHANHGL-VSLARHYFDLAPE---KDAVSWNGMLAAYVRNGRIQEAR 251

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQN 213
           +   +  +T +D  A     L+  Y +   I EA+ +F   P  ++ V+W TM++GY++ 
Sbjct: 252 EL--FDSRTEWD--AISWNALMAGYVQRSQIEEAQKMFNKMPQ-RDVVSWNTMVSGYARR 306

Query: 214 GYGFKAIECFRDMRVEGVESNQFTFPSILTACAA-----VSARDFGAQVHGCILSSGFEA 268
           G   +A   F    +  V    FT+ +I++  A       + R F A      +S     
Sbjct: 307 GDMAEARRLFDVAPIRDV----FTWTAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMM 362

Query: 269 NVYVQSALIDM----------------------YAKCGDLDSARRLLEYSEIDNEVSWNS 306
             YVQ  +++                       YA+ G LD AR +       + VSW +
Sbjct: 363 AAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAA 422

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           M+  +++ GF +E L LFK+M      ++   +  VL+  A    L     +HS ++K G
Sbjct: 423 MLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAG 482

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
           +    FV NAL+ MY K G+++ A   F  M+++DV+SW ++I G A HG  +EAL+ F 
Sbjct: 483 YGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFD 542

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFG-QQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
            MR +   PD + +  +L+AC+   ++E G    +++    G  +       ++ +  + 
Sbjct: 543 TMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRA 602

Query: 486 GCINDA-NRVFDSMHTRDVITWTALI 510
           G +++A N + D     D   W AL+
Sbjct: 603 GRLDEAVNLMKDMPFEPDSTMWGALL 628



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 196/427 (45%), Gaps = 46/427 (10%)

Query: 204 TTMITGYSQNGYGFKAIECFRD-MRVEGVESN----QFTFPSIL------TACAAVSARD 252
           + M +  S+   G +   C+RD +R E    +    QF  P +L       A    S R 
Sbjct: 31  SMMASERSEAEIGQRGRVCWRDSVREESGRRHKPEPQFGKPPMLPSRHLRAAARQRSHRR 90

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
             A    CI     +  V  ++  I  + + G +  A RL       +  ++N+M+ G+A
Sbjct: 91  PPAPADACITGKP-DMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYA 149

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
             G   +ALS F+ +     + D F+Y ++L+    +  L + +++   +       Y  
Sbjct: 150 ANGRLPQALSFFRSI----PRPDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSY-- 203

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
             N +I  +A  G +  A   F+L  +KD +SW  ++     +G  +EA + F D R   
Sbjct: 204 --NVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELF-DSRTEW 260

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
              D +  +++++   + + +E  Q+   +F K      +S  N++V  YA+ G + +A 
Sbjct: 261 ---DAISWNALMAGYVQRSQIEEAQK---MFNKMPQRDVVSW-NTMVSGYARRGDMAEAR 313

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDY--ITFVGLLFACSH 550
           R+FD    RDV TWTA++ G AQNG  +EA + +D M      PD   +++  ++ A   
Sbjct: 314 RLFDVAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAM------PDKNAVSWNAMMAAYVQ 367

Query: 551 AGLAENARWYFESMDKVYGIKPGPD--HYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
             + E A+  F++M       P  +   +  M+    ++G L EA+A+   M+ + DA  
Sbjct: 368 RRMMEEAKELFDAM-------PCRNVASWNTMLTGYAQAGMLDEARAIFG-MMPQKDAVS 419

Query: 609 WKALLSA 615
           W A+L+A
Sbjct: 420 WAAMLAA 426


>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
 gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
          Length = 886

 Score =  512 bits (1319), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 290/798 (36%), Positives = 437/798 (54%), Gaps = 61/798 (7%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           ++A+Y   G   +A  +           W+ L+  +   G    A  +  +M   G +P 
Sbjct: 89  VVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPD 148

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF- 191
            +TL   L+ C      + G  FHG      F+ N FV   LV MY++   + +A  +F 
Sbjct: 149 HFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFD 208

Query: 192 KMFPDGKNHV-AWTTMITGYSQNGYGFKAIECFRDM------RVEGVESNQFTFPSILTA 244
           ++   G + V +W +++  + +      A++ F +M      +     S+  +  +IL A
Sbjct: 209 EITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPA 268

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           CA++ A     ++H   + +G  A+ +V +ALID YAKCG +  A  +    E  + VSW
Sbjct: 269 CASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSW 328

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN------IDL------ 352
           N+M+ G+ + G    A  LFK M   +I +D  T+ +V+  +A        +D       
Sbjct: 329 NAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMIL 388

Query: 353 ----NNAKSVHSLI--------VKTGFEGYKF-----------------------VNNAL 377
                N+ ++ SL+        +  G E + +                       V+NAL
Sbjct: 389 YGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNAL 448

Query: 378 IDMYAKQGNLDCAFMVFNLM--QDKDVISWTSLITGCAYHGSYEEALKYFSDM--RISGI 433
           IDMY+K  +   A  +FN +  ++++V++WT +I G A +G   +ALK FS+M  +   +
Sbjct: 449 IDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAV 508

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG--CSSLSVDNSLVLVYAKCGCINDA 491
            P+   +S IL ACA L+ L  G+Q+HA   +      S   V N L+ +Y+KCG ++ A
Sbjct: 509 APNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTA 568

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
             VFDSM  R+ ++WT+++ G   +G+GKEAL  +D+M   G  PD I+F+ LL+ACSH+
Sbjct: 569 RNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHS 628

Query: 552 GLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKA 611
           G+ +    YF+ M   YG+     HYAC+IDLL RSG+L +A   + +M  EP A +W A
Sbjct: 629 GMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVA 688

Query: 612 LLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
           LLSACRVH ++EL E A N L  ++  N   Y  +SN+Y+TA +W+D AR+R+LMK  GI
Sbjct: 689 LLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGI 748

Query: 672 RKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEE 731
           +K PGCSWV+       F   DR HPL  +IYS ++ ++  IK  GYVP+ NFALH+V++
Sbjct: 749 KKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDD 808

Query: 732 EGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRD 791
           E K   L  HSEKLA+A+GLLT   G PIRI KNLRVCGDCH+A  YIS +    II+RD
Sbjct: 809 EEKNNLLTEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFIYISKIVDHEIIVRD 868

Query: 792 SNRFHHFKAGNCSCGDYW 809
           S+RFHHFK G+CSCG YW
Sbjct: 869 SSRFHHFKNGSCSCGGYW 886



 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 131/415 (31%), Positives = 202/415 (48%), Gaps = 46/415 (11%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF-- 98
           AL+D ++  G + +A  +F  M  +D  +WN M+  Y  SG+   A +LF     +N   
Sbjct: 299 ALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPL 358

Query: 99  --FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
              TWS++I GY+  G   EA + F QM L G  P+  T+ ++L  C+  G L +G + H
Sbjct: 359 DVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETH 418

Query: 157 GYAIKTCF------------DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP-DGKNHVAW 203
            Y++K C               +  V   L+DMY+KC+    A  +F   P   +N V W
Sbjct: 419 AYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTW 478

Query: 204 TTMITGYSQNGYGFKAIECFRDM--RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI 261
           T MI GY+Q G    A++ F +M  +   V  N +T   IL ACA +S+   G Q+H  +
Sbjct: 479 TVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYV 538

Query: 262 LSSG-FEANVY-VQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKE 319
                +E++VY V + LIDMY+KCGD+D+AR + +     NEVSW SM+ G+   G  KE
Sbjct: 539 TRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKE 598

Query: 320 ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN---- 375
           AL +F KM       DD ++  +L   +           HS +V  G + +  + +    
Sbjct: 599 ALDIFDKMQKAGFVPDDISFLVLLYACS-----------HSGMVDQGLDYFDIMRSDYGV 647

Query: 376 --------ALIDMYAKQGNLDCAFMVFNLM-QDKDVISWTSLITGCAYHGSYEEA 421
                    +ID+ A+ G LD A+     M  +     W +L++ C  H + E A
Sbjct: 648 IASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELA 702



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 149/323 (46%), Gaps = 44/323 (13%)

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
           + ++  Y  CG    A  +LE       V WN ++     +G    A+ +  +M     K
Sbjct: 87  TGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTK 146

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
            D FT P  L          +  + H LI   GFE   FV NAL+ MY++ G+L+ A +V
Sbjct: 147 PDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLV 206

Query: 394 FNLMQDK---DVISWTSLITGCAYHGSYEEALKYFSDM------RISGICPDHVVVSSIL 444
           F+ +  K   DVISW S++       +   AL  FS+M      + +    D + + +IL
Sbjct: 207 FDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNIL 266

Query: 445 SACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR--- 501
            ACA L  L   +++H+  +++G  +   V N+L+  YAKCG + DA  VF+ M  +   
Sbjct: 267 PACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVV 326

Query: 502 --------------------------------DVITWTALIMGCAQNGKGKEALQFYDQM 529
                                           DVITW+A+I G AQ G G+EAL  + QM
Sbjct: 327 SWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQM 386

Query: 530 LARGTKPDYITFVGLLFACSHAG 552
           +  G++P+ +T + LL AC+  G
Sbjct: 387 ILYGSEPNSVTIISLLSACASLG 409



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 70/309 (22%), Positives = 129/309 (41%), Gaps = 30/309 (9%)

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
            +++  +++H + I     +YP+ L     ++ L    S HS +        K +   ++
Sbjct: 42  RSVNTVRQIHQKIIAYGLLSYPASL----LSVSLPPLPS-HSYVSP------KSLGTGVV 90

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
             Y   G    A  V   +     + W  L+      G  + A+     M  +G  PDH 
Sbjct: 91  ASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHF 150

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
            +   L AC EL     G   H +   +G  S++ V N+LV +Y++ G + DA+ VFD +
Sbjct: 151 TLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEI 210

Query: 499 HTR---DVITWTALIMGCAQNGKGKEALQFYDQML------ARGTKPDYITFVGLLFACS 549
             +   DVI+W +++    +    + AL  + +M       A   + D I+ V +L AC+
Sbjct: 211 TRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACA 270

Query: 550 HAGLAENARWYFESMDKVYGIKPG--PDHYAC--MIDLLGRSGKLIEAKALLDQMVGEPD 605
                   +         Y I+ G   D + C  +ID   + G + +A  + + M  + D
Sbjct: 271 SLKALPQTKEIHS-----YAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFK-D 324

Query: 606 ATVWKALLS 614
              W A+++
Sbjct: 325 VVSWNAMVT 333


>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
          Length = 745

 Score =  512 bits (1319), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 285/745 (38%), Positives = 416/745 (55%), Gaps = 59/745 (7%)

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M   G R   +TL +VL+ C      + G  FHG      F+ N F+   LV MY++C  
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60

Query: 184 IFEAEYLFKMFPDG--KNHVAWTTMITGYSQNGYGFKAIECFRDM------RVEGVESNQ 235
           + EA  +F         + ++W ++++ + ++   + A++ F  M      +     S+ 
Sbjct: 61  LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            +  +IL AC ++ A     +VHG  + +G   +V+V +ALID YAKCG +++A ++   
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV------------- 342
            E  + VSWN+M+ G+++ G  K A  LFK M   +I +D  T+ +V             
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240

Query: 343 LNCFASNI---DLNNAKSVHSLI--------VKTGFEGYKF------------------- 372
           LN F   I    L N  ++ S++           G E + +                   
Sbjct: 241 LNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDED 300

Query: 373 --VNNALIDMYAKQGNLDCAFMVFN--LMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
             V NALIDMY+K  +   A  +F+   +++++V++WT +I G A +G   +ALK F +M
Sbjct: 301 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 360

Query: 429 --RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG--GCSSLSVDNSLVLVYAK 484
                G+ P+   +S IL ACA L  +  G+Q+HA  L+      S+  V N L+ +Y+K
Sbjct: 361 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSK 420

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG ++ A  VFDSM  +  I+WT+++ G   +G+G EAL  +D+M   G  PD ITF+ +
Sbjct: 421 CGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVV 480

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L+ACSH G+ +    YF+SM   YG+ P  +HYA  IDLL R G+L +A   +  M  EP
Sbjct: 481 LYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEP 540

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
            A VW ALLSACRVH ++EL E A N L E+   N   Y  +SN+Y+TAG+W+D AR+R 
Sbjct: 541 TAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRH 600

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
           LMK  GI+K PGCSWV+       F   DR HPL   IY+ ++ ++  IK  GYVP+ NF
Sbjct: 601 LMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNF 660

Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
           ALH+V+EE K   L  HSEKLA+A+GLLT   G PIRI KNLRVCGDCH+A  YIS +  
Sbjct: 661 ALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVD 720

Query: 785 RHIILRDSNRFHHFKAGNCSCGDYW 809
             I++RD +RFHHFK G+CSCG YW
Sbjct: 721 HEIVVRDPSRFHHFKNGSCSCGGYW 745



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 139/447 (31%), Positives = 221/447 (49%), Gaps = 37/447 (8%)

Query: 6   FKILNFSLRCRS-KIIGPARYTHNVGNSVKPASDLN----RALVD-FSNSGEIDEAGQLF 59
             I+N    C S K +   +  H  GN+++  + L+     AL+D ++  G ++ A ++F
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVH--GNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVF 178

Query: 60  EKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF----FTWSSLIYGYSNYGLDI 115
             M  +D  +WN M+A Y+ SG  + A +LF     +N      TW+++I GYS  G   
Sbjct: 179 NMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSH 238

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCF----------D 165
           EA  +F QM   G  P+  T+ +VL  C+  G   +G + H Y++K C           D
Sbjct: 239 EALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGED 298

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFP-DGKNHVAWTTMITGYSQNGYGFKAIECFR 224
            +  V   L+DMY+KC+    A  +F   P + +N V WT MI G++Q G    A++ F 
Sbjct: 299 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFV 358

Query: 225 DMRVE--GVESNQFTFPSILTACAAVSARDFGAQVHGCILS-SGFEANVY-VQSALIDMY 280
           +M  E  GV  N +T   IL ACA ++A   G Q+H  +L    ++++ Y V + LI+MY
Sbjct: 359 EMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMY 418

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
           +KCGD+D+AR + +     + +SW SM+ G+   G   EAL +F KM       DD T+ 
Sbjct: 419 SKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFL 478

Query: 341 SVL-NCFASNIDLNNAKSVHSLIVKTGF----EGYKFVNNALIDMYAKQGNLDCAF-MVF 394
            VL  C    +         S+    G     E Y +     ID+ A+ G LD A+  V 
Sbjct: 479 VVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYA----IDLLARFGRLDKAWKTVK 534

Query: 395 NLMQDKDVISWTSLITGCAYHGSYEEA 421
           ++  +   + W +L++ C  H + E A
Sbjct: 535 DMPMEPTAVVWVALLSACRVHSNVELA 561


>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g23330
 gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  512 bits (1319), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 251/645 (38%), Positives = 385/645 (59%), Gaps = 36/645 (5%)

Query: 201 VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
           +AW ++I  ++      KA+  F +MR  G   +   FPS+L +C  +    FG  VHG 
Sbjct: 71  LAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGF 130

Query: 261 ILSSGFEANVYVQSALIDMYAK-----------------------CGD------------ 285
           I+  G + ++Y  +AL++MYAK                        GD            
Sbjct: 131 IVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPF 190

Query: 286 -LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
            +DS RR+ E     + VS+N++I G+A+ G +++AL + ++M   D+K D FT  SVL 
Sbjct: 191 GIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLP 250

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
            F+  +D+   K +H  +++ G +   ++ ++L+DMYAK   ++ +  VF+ +  +D IS
Sbjct: 251 IFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS 310

Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
           W SL+ G   +G Y EAL+ F  M  + + P  V  SS++ ACA L  L  G+Q+H   L
Sbjct: 311 WNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVL 370

Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ 524
           + G  S++ + ++LV +Y+KCG I  A ++FD M+  D ++WTA+IMG A +G G EA+ 
Sbjct: 371 RGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVS 430

Query: 525 FYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLL 584
            +++M  +G KP+ + FV +L ACSH GL + A  YF SM KVYG+    +HYA + DLL
Sbjct: 431 LFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLL 490

Query: 585 GRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYV 644
           GR+GKL EA   + +M  EP  +VW  LLS+C VH +LEL E+ A  +F ++  N   YV
Sbjct: 491 GRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYV 550

Query: 645 QLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYS 704
            + NMY++ G+W++ A++R  M+ +G+RK+P CSW+E  ++ H F+S DR HP    I  
Sbjct: 551 LMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINE 610

Query: 705 KIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFK 764
            +  +M  +++ GYV D +  LH+V+EE K   L  HSE+LAVAFG++    G  IR+ K
Sbjct: 611 FLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTK 670

Query: 765 NLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           N+R+C DCH A+K+IS +  R II+RD++RFHHF  GNCSCGDYW
Sbjct: 671 NIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 207/418 (49%), Gaps = 37/418 (8%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +I+ Y N   L EA  LF          W S+I  +++  L  +A   F +M+  G  P 
Sbjct: 45  VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPD 104

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC----------- 181
                +VL+ C++   L+ GE  HG+ ++   D + +    L++MYAK            
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGN 164

Query: 182 --------------------KCIF-----EAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
                                CI          +F++ P  K+ V++ T+I GY+Q+G  
Sbjct: 165 VFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPR-KDVVSYNTIIAGYAQSGMY 223

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
             A+   R+M    ++ + FT  S+L   +       G ++HG ++  G +++VY+ S+L
Sbjct: 224 EDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSL 283

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           +DMYAK   ++ + R+       + +SWNS++ G+ + G + EAL LF++M    +K   
Sbjct: 284 VDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGA 343

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
             + SV+   A    L+  K +H  +++ GF    F+ +AL+DMY+K GN+  A  +F+ 
Sbjct: 344 VAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDR 403

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLE 454
           M   D +SWT++I G A HG   EA+  F +M+  G+ P+ V   ++L+AC+ + +++
Sbjct: 404 MNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVD 461



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 204/381 (53%), Gaps = 23/381 (6%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYA--NSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGL 113
           G +F++M  R   + +  + A        +   +++F   P K+  +++++I GY+  G+
Sbjct: 163 GNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGM 222

Query: 114 DIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG 173
             +A  +  +M     +P  +TL +VL + S    + +G++ HGY I+   D + ++ + 
Sbjct: 223 YEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSS 282

Query: 174 LVDMYAKCKCIFEAEYLFKMF--PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV 231
           LVDMYAK   I ++E +F      DG   ++W +++ GY QNG   +A+  FR M    V
Sbjct: 283 LVDMYAKSARIEDSERVFSRLYCRDG---ISWNSLVAGYVQNGRYNEALRLFRQMVTAKV 339

Query: 232 ESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR 291
           +     F S++ ACA ++    G Q+HG +L  GF +N+++ SAL+DMY+KCG++ +AR+
Sbjct: 340 KPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARK 399

Query: 292 LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID 351
           + +   + +EVSW ++I+G A  G   EA+SLF++M  + +K +   + +VL    S++ 
Sbjct: 400 IFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTA-CSHVG 458

Query: 352 L--------NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVI 403
           L        N+   V+ L      E Y     A+ D+  + G L+ A+   + M  +   
Sbjct: 459 LVDEAWGYFNSMTKVYGL--NQELEHYA----AVADLLGRAGKLEEAYNFISKMCVEPTG 512

Query: 404 S-WTSLITGCAYHGSYEEALK 423
           S W++L++ C+ H + E A K
Sbjct: 513 SVWSTLLSSCSVHKNLELAEK 533



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 154/311 (49%), Gaps = 12/311 (3%)

Query: 44  VDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSS 103
           VD     EI   G +  K  D D +  ++++  YA S R+ +++++F+    ++  +W+S
Sbjct: 256 VDVIKGKEIH--GYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNS 313

Query: 104 LIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC 163
           L+ GY   G   EA  LF QM     +P      +V+  C+    L  G+Q HGY ++  
Sbjct: 314 LVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGG 373

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
           F  N F+ + LVDMY+KC  I  A  +F    +  + V+WT +I G++ +G+G +A+  F
Sbjct: 374 FGSNIFIASALVDMYSKCGNIKAARKIFDRM-NVLDEVSWTAIIMGHALHGHGHEAVSLF 432

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFG-AQVHGCILSSGFEANVYVQSALIDMYAK 282
            +M+ +GV+ NQ  F ++LTAC+ V   D      +      G    +   +A+ D+  +
Sbjct: 433 EEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGR 492

Query: 283 CGDLDSARRLLEYSEIDNEVS-WNSMIVGFARQGFHKEALSLFKKMHARDIKIDD---FT 338
            G L+ A   +    ++   S W++++   +    HK  L L +K+  +   +D      
Sbjct: 493 AGKLEEAYNFISKMCVEPTGSVWSTLL---SSCSVHKN-LELAEKVAEKIFTVDSENMGA 548

Query: 339 YPSVLNCFASN 349
           Y  + N +ASN
Sbjct: 549 YVLMCNMYASN 559



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 102/229 (44%), Gaps = 37/229 (16%)

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
           + AK +H+  ++T    +   +  +I +Y     L  A ++F  ++   V++W S+I   
Sbjct: 22  SQAKQLHAQFIRTQSLSHTSAS-IVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCF 80

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
                + +AL  F +MR SG CPDH V  S+L +C  +  L FG+ VH   ++ G    L
Sbjct: 81  TDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDL 140

Query: 473 SVDNSLVLVYAKC-------------------------------GC-----INDANRVFD 496
              N+L+ +YAK                                 C     I+   RVF+
Sbjct: 141 YTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFE 200

Query: 497 SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
            M  +DV+++  +I G AQ+G  ++AL+   +M     KPD  T   +L
Sbjct: 201 VMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVL 249



 Score = 46.2 bits (108), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 9/198 (4%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK---- 96
           ALVD +S  G I  A ++F++M+  D  +W  +I  +A  G   EA  LF E   +    
Sbjct: 383 ALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKP 442

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
           N   + +++   S+ GL  EA+  F  M  + Y  +Q  L++   +  L G   + E+ +
Sbjct: 443 NQVAFVAVLTACSHVGLVDEAWGYFNSMT-KVYGLNQ-ELEHYAAVADLLGRAGKLEEAY 500

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF-KMFP-DGKNHVAWTTMITGYSQNG 214
            +  K C +    V + L+   +  K +  AE +  K+F  D +N  A+  M   Y+ NG
Sbjct: 501 NFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNG 560

Query: 215 YGFKAIECFRDMRVEGVE 232
              +  +    MR +G+ 
Sbjct: 561 RWKEMAKLRLRMRKKGLR 578


>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
 gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
          Length = 822

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 283/759 (37%), Positives = 429/759 (56%), Gaps = 30/759 (3%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETP-FKNFFTWSSLIYGYSNYGLDIEAFELFW 122
           DRD    N+++  Y+  G +  A+ +F+     ++  +W+++    +  G + E+  L  
Sbjct: 81  DRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLIG 140

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGL-----LQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
           +M   G  P+ YTL  V   C    L            H   +   +  +  V + L+DM
Sbjct: 141 EMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGL---WGTDIAVGSALIDM 197

Query: 178 YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
            A+   +  A  +F    + K  V WT +I+ Y Q     +A+E F D   +G E +++T
Sbjct: 198 LARNGDLASARKVFDGLIE-KTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDRYT 256

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG---DLDSARRLLE 294
             S+++AC  + +   G Q+H   L  GF ++  V   L+DMYAK      +D A ++ E
Sbjct: 257 MSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVFE 316

Query: 295 YSEIDNEVSWNSMIVGFARQGFHK-EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
               ++ +SW ++I G+ + G  + + + LF +M    IK +  TY S+L   A+  D +
Sbjct: 317 RMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHD 376

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
           + + VH+ ++K+       V NAL+ MYA+ G ++ A  VFN + ++ +IS       C 
Sbjct: 377 SGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIS-------CI 429

Query: 414 YHGSYEEALKYF---SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
             G  +  L +     DM IS         +S++SA A + +L  GQQ+HA+ LK+G  S
Sbjct: 430 TEGR-DAPLDHRIGRMDMGISS-----STFASLISAAASVGMLTKGQQLHAMTLKAGFGS 483

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
              V NSLV +Y++CG + DA R F+ +  R+VI+WT++I G A++G  + AL  +  M+
Sbjct: 484 DRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMI 543

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKL 590
             G KP+ +T++ +L ACSH GL    + YF SM + +G+ P  +HYACM+DLL RSG +
Sbjct: 544 LTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLV 603

Query: 591 IEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMY 650
            EA   +++M  + DA VWK LL ACR H ++E+GE AA N+ ELEP +  PYV LSN+Y
Sbjct: 604 KEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAPYVLLSNLY 663

Query: 651 STAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIM 710
           + AG W++ AR+R  M+   + KE G SW+E  +  H F + D  HP   DIY K+D ++
Sbjct: 664 ADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTLV 723

Query: 711 LLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCG 770
             IK  GYVPD +  LH++ +E KE  L  HSEK+AVAFGL+T     PIRIFKNLRVC 
Sbjct: 724 GEIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVCA 783

Query: 771 DCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           DCH+A+KY+S    R IILRDSNRFH  K G CSCG+YW
Sbjct: 784 DCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822


>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 805

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 274/754 (36%), Positives = 426/754 (56%), Gaps = 3/754 (0%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
           Q+       D F    ++ AY++   L  A+ +F++         ++++ GY   G   E
Sbjct: 54  QIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRE 113

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
             ELF  M+         +    L+ C+     + G +    A++   + N FV + ++ 
Sbjct: 114 TLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMIS 173

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
              K   I EA+ +F   P+ K+ V W ++I GY Q G    A + F +M   G++ +  
Sbjct: 174 FLVKFGKIGEAQRVFDGMPN-KDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPI 232

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           T  S++ AC  +     G  +HG +L  G   ++ V ++ +DMY+K GD++SAR +    
Sbjct: 233 TMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKM 292

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              N VSWN+MI G  R G   E+  LF ++       D  T  S+L   +    L   K
Sbjct: 293 PTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGK 352

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H   +++ FE    ++ A++D+Y+K G+L  A  VFN M+D++VI+WT+++ G A +G
Sbjct: 353 ILHGCAIRS-FESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNG 411

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
             E+AL+ F+ M+  GI  + V   S++ +CA L  L+ G+ +H    + G    +    
Sbjct: 412 HAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMT 471

Query: 477 SLVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           +LV +YAKCG IN A R+F     ++DV+ W ++I G   +G G +A+  Y +M+  G K
Sbjct: 472 ALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLK 531

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           P+  TF+ LL ACSH+ L E     F SM++ + I+P   HYAC++DLL R+G+  EA+A
Sbjct: 532 PNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQA 591

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
           L+++M  +P   V +ALLS CR H ++ LG + ++ L  L+ MN   Y+ LSN+Y+ A +
Sbjct: 592 LIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIYAEARR 651

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
           W+    +R LM++RG++K PG S VET + VH F + D  HP   +IY  ++ +   ++ 
Sbjct: 652 WDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLESLRSAVET 711

Query: 716 AGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
           +GYVPD +  L +V+EE K   L  HSE+LA+AFGLLT P G+ IRI KNLRVCGDCHT 
Sbjct: 712 SGYVPDTSCVLRDVDEEMKVRMLWGHSERLAIAFGLLTTPAGSLIRITKNLRVCGDCHTV 771

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            KYIS +  R II+RD+NRFHHF  G CSCGDYW
Sbjct: 772 TKYISKIVKREIIVRDANRFHHFSNGECSCGDYW 805



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 201/444 (45%), Gaps = 43/444 (9%)

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
            H  I+++    + +V + L+  Y+    L++AR + +       +  N+M+ G+ + G 
Sbjct: 51  THAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGR 110

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
           ++E L LF  M +R++++D  +    L   AS++D      + S  V+ G E  +FV ++
Sbjct: 111 YRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSS 170

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           +I    K G +  A  VF+ M +KDV+ W S+I G    G ++ A + F +M  SGI P 
Sbjct: 171 MISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPS 230

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFD 496
            + ++S++ AC  +  L+ G+ +H   L  G  + + V  S V +Y+K G I  A  VF 
Sbjct: 231 PITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFY 290

Query: 497 SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA----- 551
            M TR++++W A+I GC +NG   E+   + +++      D  T V LL  CS       
Sbjct: 291 KMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLAT 350

Query: 552 -----------------------------GLAENARWYFESMDKVYGIKPGPDHYACMID 582
                                        G  + A + F  M     I      +  M+ 
Sbjct: 351 GKILHGCAIRSFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVIT-----WTAMLV 405

Query: 583 LLGRSGKLIEAKALLDQMVGE---PDATVWKALLSACRVHGDLELGERAANNLFELE-PM 638
            L ++G   +A  L  QM  E    ++  + +L+ +C   G L+ G     +LF L    
Sbjct: 406 GLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAF 465

Query: 639 NAMPYVQLSNMYSTAGKWEDAARV 662
           + +    L +MY+  GK   A R+
Sbjct: 466 DIVNMTALVDMYAKCGKINLAERI 489



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 126/263 (47%), Gaps = 43/263 (16%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           L+ A+VD +S  G + +A  +F +M DR+  TW  M+   A +G   +A +LF       
Sbjct: 368 LSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFA------ 421

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                                    QMQ EG   +  T  +++  C+  G L+RG   HG
Sbjct: 422 -------------------------QMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHG 456

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
           +  +  F  +   +T LVDMYAKC  I  AE +F      K+ V W +MITGY  +G+G+
Sbjct: 457 HLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGY 516

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ---- 273
           +A+  +  M  EG++ NQ TF S+L+AC+     +      G  L +  E +  ++    
Sbjct: 517 QAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVE-----QGISLFNSMERDHNIRPIEK 571

Query: 274 --SALIDMYAKCGDLDSARRLLE 294
             + L+D+ ++ G  + A+ L+E
Sbjct: 572 HYACLVDLLSRAGRFEEAQALIE 594



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 147/375 (39%), Gaps = 48/375 (12%)

Query: 340 PSVLNCFASNI-----DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVF 394
           P++++ F S +     +L   KS H+ I+       +FV   L+  Y+   +L+ A  VF
Sbjct: 28  PTIIHNFLSLLRESSKNLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVF 87

Query: 395 NLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLE 454
           +       +   +++ G    G Y E L+ F  MR   +  D    +  L ACA     E
Sbjct: 88  DQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYE 147

Query: 455 FGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCA 514
            G ++ +  ++ G   +  V +S++    K G I +A RVFD M  +DV+ W ++I G  
Sbjct: 148 MGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYV 207

Query: 515 QNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC-------------------------- 548
           Q G    A Q + +M   G KP  IT   L+ AC                          
Sbjct: 208 QAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDIL 267

Query: 549 ---------SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ 599
                    S  G  E+ARW F  M     +      +  MI    R+G + E+  L  +
Sbjct: 268 VLTSFVDMYSKMGDIESARWVFYKMPTRNLVS-----WNAMISGCVRNGLVGESFDLFHR 322

Query: 600 MV---GEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
           +V   G  D T   +LL  C     L  G+            N +    + ++YS  G  
Sbjct: 323 LVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRSFESNLILSTAIVDLYSKCGSL 382

Query: 657 EDAARVRKLMKSRGI 671
           + A  V   MK R +
Sbjct: 383 KQATFVFNRMKDRNV 397


>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 253/609 (41%), Positives = 370/609 (60%), Gaps = 40/609 (6%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
            + +++ AC    A + G +VH    +S F   V++ + L+DMYAKCG L  A+ L +  
Sbjct: 89  VYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEM 148

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA- 355
              +  SWN+MIVG+A+ G  ++A  LF +M  RD    +F++ + ++ + ++     A 
Sbjct: 149 GHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRD----NFSWNAAISGYVTHNQPREAL 204

Query: 356 -----------------------------------KSVHSLIVKTGFEGYKFVNNALIDM 380
                                              K +H  +++T     + V +AL+D+
Sbjct: 205 ELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDL 264

Query: 381 YAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVV 440
           Y K G+LD A  +F+ M+D+DV+SWT++I  C   G  EE    F D+  SG+ P+    
Sbjct: 265 YGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTF 324

Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT 500
           + +L+ACA+      G++VH   + +G        ++LV +Y+KCG    A RVF+ MH 
Sbjct: 325 AGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQ 384

Query: 501 RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWY 560
            D+++WT+LI+G AQNG+  EAL F++ +L  GTKPD +T+VG+L AC+HAGL +    Y
Sbjct: 385 PDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEY 444

Query: 561 FESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
           F S+ + +G+    DHYAC+IDLL RSG+  EA+ ++D M  +PD  +W +LL  CR+HG
Sbjct: 445 FHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHG 504

Query: 621 DLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWV 680
           +LEL +RAA  L+E+EP N   Y+ L+N+Y+ AG W + A VRK M + GI K+PG SW+
Sbjct: 505 NLELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWI 564

Query: 681 ETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAY 740
           E   QVH+F+  D  HP  +DI+  + E+   IKE GYVPD NF LH+VEEE KE  L Y
Sbjct: 565 EIKRQVHVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKEQNLVY 624

Query: 741 HSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKA 800
           HSEKLAV FG+++ P G PI++FKNLR C DCHTA+KYIS +  R I +RDSNRFH F+ 
Sbjct: 625 HSEKLAVVFGIISTPPGTPIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDSNRFHCFED 684

Query: 801 GNCSCGDYW 809
           G+CSC DYW
Sbjct: 685 GSCSCKDYW 693



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 141/415 (33%), Positives = 223/415 (53%), Gaps = 5/415 (1%)

Query: 13  LRCRSKIIGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWN 71
           +R R+  +G   + H   ++  P   ++  L+D ++  G + +A  LF++M  RD  +WN
Sbjct: 98  VRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWN 157

Query: 72  TMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL-EGYR 130
           TMI  YA  GRL +A+KLF+E P ++ F+W++ I GY  +    EA ELF  MQ  E   
Sbjct: 158 TMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSS 217

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            +++TL + L   +    L+ G++ HGY I+T  +L+  V + L+D+Y KC  + EA  +
Sbjct: 218 SNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGI 277

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F    D ++ V+WTTMI    ++G   +    FRD+   GV  N++TF  +L ACA  +A
Sbjct: 278 FDQMKD-RDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAA 336

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              G +VHG ++ +G++   +  SAL+ MY+KCG+   ARR+       + VSW S+IVG
Sbjct: 337 EHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVG 396

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEG 369
           +A+ G   EAL  F+ +     K D  TY  VL+ C  + +     +  HS+  K G   
Sbjct: 397 YAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMH 456

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGSYEEALK 423
                  +ID+ A+ G    A  + + M  K D   W SL+ GC  HG+ E A +
Sbjct: 457 TADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKR 511



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 144/493 (29%), Positives = 234/493 (47%), Gaps = 40/493 (8%)

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA EL  +     +RPS      ++  C     L+ G + H +   + F    F+   L+
Sbjct: 73  EAVELLHRTD---HRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLL 129

Query: 176 DMYAKCKCIFEAEYLF----------------------------KMFPD--GKNHVAWTT 205
           DMYAKC  + +A+ LF                            K+F +   +++ +W  
Sbjct: 130 DMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNA 189

Query: 206 MITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS 264
            I+GY  +    +A+E FR M R E   SN+FT  S L A AA+     G ++HG ++ +
Sbjct: 190 AISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRT 249

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLF 324
               +  V SAL+D+Y KCG LD AR + +  +  + VSW +MI      G  +E   LF
Sbjct: 250 ELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLF 309

Query: 325 KKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
           + +    ++ +++T+  VLN  A +   +  K VH  ++  G++   F  +AL+ MY+K 
Sbjct: 310 RDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKC 369

Query: 385 GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
           GN   A  VFN M   D++SWTSLI G A +G  +EAL +F  +  SG  PD V    +L
Sbjct: 370 GNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVL 429

Query: 445 SACAELTVLEFG-QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-D 502
           SAC    +++ G +  H++  K G   +      ++ + A+ G   +A  + D+M  + D
Sbjct: 430 SACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPD 489

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
              W +L+ GC  +G   E  +   + L      +  T++ L    ++AGL        +
Sbjct: 490 KFLWASLLGGCRIHG-NLELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRK 548

Query: 563 SMDKVYGI--KPG 573
            MD + GI  KPG
Sbjct: 549 DMDNM-GIVKKPG 560



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 156/331 (47%), Gaps = 43/331 (12%)

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
           KEA+ L   +H  D +     Y +++     +  L   + VH+    + F    F++N L
Sbjct: 72  KEAVEL---LHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRL 128

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR-------- 429
           +DMYAK G+L  A M+F+ M  +D+ SW ++I G A  G  E+A K F +M         
Sbjct: 129 LDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWN 188

Query: 430 --ISG---------------ICPDHVVVSS-------ILSACAELTVLEFGQQVHAVFLK 465
             ISG               +   H   SS        L+A A +  L  G+++H   ++
Sbjct: 189 AAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIR 248

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
           +       V ++L+ +Y KCG +++A  +FD M  RDV++WT +I  C ++G+ +E    
Sbjct: 249 TELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLL 308

Query: 526 YDQMLARGTKPDYITFVGLLFACS-HAG--LAENARWYFESMDKVYGIKPGPDHYACMID 582
           +  ++  G +P+  TF G+L AC+ HA   L +    Y        G  PG    + ++ 
Sbjct: 309 FRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHA----GYDPGSFAISALVH 364

Query: 583 LLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
           +  + G    A+ + ++M  +PD   W +L+
Sbjct: 365 MYSKCGNTRVARRVFNEM-HQPDLVSWTSLI 394



 Score = 43.5 bits (101), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 12/103 (11%)

Query: 581 IDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNA 640
           +D+L +  ++ EA  LL +    P A V+  L++AC  H  LELG R   +    +  N 
Sbjct: 62  VDVLCQQKRVKEAVELLHRTDHRPSARVYSTLIAACVRHRALELGRRVHAH---TKASNF 118

Query: 641 MPYVQLSN----MYSTAGKWEDAARVRKLMKSRGIRKEPGCSW 679
           +P V +SN    MY+  G   DA  +   M  R +     CSW
Sbjct: 119 VPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDL-----CSW 156


>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 267/629 (42%), Positives = 382/629 (60%), Gaps = 9/629 (1%)

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           LF  + D  N  +W ++I   +++G   +A+  F  MR   ++ N+ TFP  + +C+A+ 
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 166

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
               G Q H   L  GFE +++V SAL+DMY+KCG+L  AR L +     N VSW SMI 
Sbjct: 167 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 226

Query: 310 GFARQGFHKEALSLFKKMHARD--------IKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           G+ +      AL LFK+    +        + +D     SVL+  +   + +  + VH  
Sbjct: 227 GYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGF 286

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           ++K GFEG   V N L+D YAK G L  +  VF+ M ++DVISW S+I   A +G   E+
Sbjct: 287 LIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTES 346

Query: 422 LKYFSDMRISG-ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
           ++ F  M   G I  + V +S++L ACA       G+ +H   +K G  S++ V  S++ 
Sbjct: 347 MEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIID 406

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           +Y KCG +  A + FD M  ++V +W+A++ G   +G  KEAL+ + +M   G KP+YIT
Sbjct: 407 MYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYIT 466

Query: 541 FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
           FV +L ACSHAGL E    +F++M   + ++PG +HY CM+DLLGR+G L EA  L+  M
Sbjct: 467 FVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGM 526

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAA 660
              PD  VW ALL ACR+H +++LGE +A  LFEL+P N   YV LSN+Y+ AG+WED  
Sbjct: 527 KLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVE 586

Query: 661 RVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
           R+R LMK+ G+ K PG S V+   +VH+F+  DR HP    IY  ++++ + ++E GYVP
Sbjct: 587 RMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVP 646

Query: 721 DMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYIS 780
           DM   LH+V  E KE+ L  HSEKLAVAFG++    G  I I KNLRVCGDCHTA+K+IS
Sbjct: 647 DMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFIS 706

Query: 781 AVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            +  R I++RDS RFHHF+ G CSCGDYW
Sbjct: 707 KIVDREIVVRDSKRFHHFRDGLCSCGDYW 735



 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 145/457 (31%), Positives = 240/457 (52%), Gaps = 32/457 (7%)

Query: 77  YANSGRLREAKKLFNETPFK-NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYT 135
           Y+N+  L     LFN+   K N F+W+S+I   +  G  +EA   F  M+    +P++ T
Sbjct: 98  YSNNPNL---TTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRST 154

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
               ++ CS    L  G Q H  A+   F+ + FV + LVDMY+KC  + +A  LF    
Sbjct: 155 FPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEIS 214

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE--GVES------NQFTFPSILTACAA 247
             +N V+WT+MITGY QN    +A+  F++  VE  G E       +     S+L+AC+ 
Sbjct: 215 H-RNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSR 273

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           VS +     VHG ++  GFE ++ V++ L+D YAKCG+L  +RR+ +     + +SWNS+
Sbjct: 274 VSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSI 333

Query: 308 IVGFARQGFHKEALSLFKKM-HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           I  +A+ G   E++ +F +M    +I  +  T  +VL   A +      K +H  ++K G
Sbjct: 334 IAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMG 393

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
            E   FV  ++IDMY K G ++ A   F+ M++K+V SW++++ G   HG  +EAL+ F 
Sbjct: 394 LESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFY 453

Query: 427 DMRISGICPDHVVVSSILSACAELTVLE-----FGQQVHAVFLKSG----GCSSLSVDNS 477
           +M ++G+ P+++   S+L+AC+   +LE     F    H   ++ G    GC        
Sbjct: 454 EMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGC-------- 505

Query: 478 LVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
           +V +  + G + +A  +   M  R D + W AL+  C
Sbjct: 506 MVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGAC 542



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 187/389 (48%), Gaps = 22/389 (5%)

Query: 42  ALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTW 101
           AL+D  +  +  +   +F    + D F  + ++  Y+  G LR+A+ LF+E   +N  +W
Sbjct: 164 ALLDLHSGRQAHQQALIFG--FEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSW 221

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLEGYRPS--------QYTLDNVLRLCSLKGLLQRGE 153
           +S+I GY        A  LF +  +E                + +VL  CS        E
Sbjct: 222 TSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITE 281

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQN 213
             HG+ IK  F+ +  V   L+D YAKC  +  +  +F    + ++ ++W ++I  Y+QN
Sbjct: 282 GVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAE-RDVISWNSIIAVYAQN 340

Query: 214 GYGFKAIECFRDMRVEG-VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYV 272
           G   +++E F  M  +G +  N  T  ++L ACA   ++  G  +H  ++  G E+NV+V
Sbjct: 341 GMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFV 400

Query: 273 QSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI 332
            +++IDMY KCG ++ AR+  +     N  SW++M+ G+   G  KEAL +F +M+   +
Sbjct: 401 GTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGV 460

Query: 333 KIDDFTYPSVLNCFASNIDLNNA-----KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL 387
           K +  T+ SVL   +    L           H   V+ G E Y      ++D+  + G L
Sbjct: 461 KPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHY----GCMVDLLGRAGYL 516

Query: 388 DCAFMVFNLMQDK-DVISWTSLITGCAYH 415
             AF +   M+ + D + W +L+  C  H
Sbjct: 517 KEAFDLIKGMKLRPDFVVWGALLGACRMH 545



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 126/276 (45%), Gaps = 43/276 (15%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  ++  GE+  + ++F+ M++RD  +WN++IA YA +                   
Sbjct: 300 NTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQN------------------- 340

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
                       G+  E+ E+F +M  +G    +  TL  VL  C+  G  + G+  H  
Sbjct: 341 ------------GMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQ 388

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFK 218
            IK   + N FV T ++DMY KC  +  A   F    + KN  +W+ M+ GY  +G+  +
Sbjct: 389 VIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMRE-KNVKSWSAMVAGYGMHGHAKE 447

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARD-----FGAQVHGCILSSGFEANVYVQ 273
           A+E F +M + GV+ N  TF S+L AC+     +     F A  H   +  G E      
Sbjct: 448 ALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEH----Y 503

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNE-VSWNSMI 308
             ++D+  + G L  A  L++  ++  + V W +++
Sbjct: 504 GCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALL 539


>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1174

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 288/750 (38%), Positives = 428/750 (57%), Gaps = 6/750 (0%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           +D   W   +  + + G+L  A+++F+  P  +   +++LI  YS  G    A +L+  M
Sbjct: 32  KDKKQWQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSM 91

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
                 P++YT   VL+ CS    L+ G   H +A       + FV T L+D+Y +C   
Sbjct: 92  LRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARF 151

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILT 243
             A  +F   P  ++ VAW  M+ GY+ +G    AI    DM+  G +  N  T  S+L 
Sbjct: 152 GPARNVFAKMP-MRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLP 210

Query: 244 ACAAVSARDFGAQVHGCILSSGFEAN---VYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
             A   A   G  +H   L +  E N   V + +AL+DMYAKC  L  A R+     + N
Sbjct: 211 LLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRN 270

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIK-IDDFTYPSVLNCFASNIDLNNAKSVH 359
           +V+W+++I GF       EA +LFK M    +  +   +  S L   AS  DL+    +H
Sbjct: 271 DVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLH 330

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
           +LI K+G       +N+L+ MYAK G ++ A M F+ +  KD IS+ +L++GC  +G  E
Sbjct: 331 ALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAE 390

Query: 420 EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
           EA   F  M+   + PD   + S++ AC+ L  L+ G+  H   +  G     S+ NSL+
Sbjct: 391 EAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLI 450

Query: 480 LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
            +YAKCG I+ + +VFD M  RDV++W  +I G   +G GKEA   +  M  +G  PD +
Sbjct: 451 DMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDV 510

Query: 540 TFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ 599
           TF+ L+ ACSH+GL    + +F++M   YGI P  +HY CM+DLL R G L EA   +  
Sbjct: 511 TFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQS 570

Query: 600 MVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDA 659
           M  + D  VW ALL ACR+H +++LG++ +  + +L P     +V LSN++S AG++++A
Sbjct: 571 MPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEA 630

Query: 660 ARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYV 719
           A VR + K +G +K PG SW+E N  +H F+  D+ HP   DIY ++D IM+ IK+ GY 
Sbjct: 631 AEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQ 690

Query: 720 PDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYI 779
            D +F L ++EEE KE  L YHSEKLA+AFG+L+L +   I + KNLRVCGDCHTA+KY+
Sbjct: 691 ADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYM 750

Query: 780 SAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           + V  R II+RD+NRFHHFK G CSCG++W
Sbjct: 751 TLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 41/172 (23%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           +L+D ++  G+ID + Q+F+KM  RD  +WNTMIA                         
Sbjct: 448 SLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIA------------------------- 482

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF----- 155
                 GY  +GL  EA  LF  M+ +G+ P   T   ++  CS  GL+  G+ +     
Sbjct: 483 ------GYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMT 536

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
           H Y I     +  ++   +VD+ A+   + EA    +  P   +   W  ++
Sbjct: 537 HKYGILP--RMEHYIC--MVDLLARGGLLDEAYQFIQSMPLKADVRVWGALL 584


>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 734

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 269/694 (38%), Positives = 404/694 (58%), Gaps = 3/694 (0%)

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
           A   F  M   G  P   T  ++L+LC+ +G L  G   H        D  A   T L +
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIE-CFRDMRVEGVESNQ 235
           MYAKC+   +A  +F   P  ++ VAW  ++ GY++NG    A+E   R    EG   + 
Sbjct: 103 MYAKCRRPADARRVFDRMP-VRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDS 161

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            T  S+L ACA   A     + H   + SG E  V V +A++D Y KCGD+ +AR + ++
Sbjct: 162 ITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDW 221

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               N VSWN+MI G+A+ G  +EAL+LF +M    + + D +  + L        L+  
Sbjct: 222 MPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEG 281

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
             VH L+V+ G +    V NALI MY+K   +D A  VF+ +  +  +SW ++I GCA +
Sbjct: 282 MRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQN 341

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G  E+A++ F+ M++  + PD   + S++ A A+++     + +H   ++      + V 
Sbjct: 342 GCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVL 401

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
            +L+ +YAKCG +N A  +F+S   R VITW A+I G   +G GK A++ +++M + G  
Sbjct: 402 TALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIV 461

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           P+  TF+ +L ACSHAGL +  R YF SM + YG++PG +HY  M+DLLGR+GKL EA A
Sbjct: 462 PNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWA 521

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
            + +M  +P  +V+ A+L AC++H ++EL E +A  +FEL P   + +V L+N+Y+ A  
Sbjct: 522 FIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASM 581

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
           W+D ARVR  M+  G++K PG S ++  +++H F S    H    +IYS++ +++  IK 
Sbjct: 582 WKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKA 641

Query: 716 AGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
            GYVPD + ++H+VE++ K   L  HSEKLA+AFGL+    G  I+I KNLRVC DCH A
Sbjct: 642 VGYVPDTD-SIHDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNA 700

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            K IS V  R II+RD  RFHHFK G CSCGDYW
Sbjct: 701 TKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 134/404 (33%), Positives = 219/404 (54%), Gaps = 2/404 (0%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            QL  +  D +      +   YA   R  +A+++F+  P ++   W++L+ GY+  GL  
Sbjct: 83  AQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLAR 142

Query: 116 EAFELFWQMQ-LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
            A E+  +MQ  EG RP   TL +VL  C+    L    + H +AI++  +    V T +
Sbjct: 143 MAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAI 202

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           +D Y KC  I  A  +F   P  KN V+W  MI GY+QNG   +A+  F  M  EGV+  
Sbjct: 203 LDAYCKCGDIRAARVVFDWMPT-KNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVT 261

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
             +  + L AC  +   D G +VH  ++  G ++NV V +ALI MY+KC  +D A  + +
Sbjct: 262 DVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFD 321

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
             +   +VSWN+MI+G A+ G  ++A+ LF +M   ++K D FT  SV+   A   D   
Sbjct: 322 ELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQ 381

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
           A+ +H   ++   +   +V  ALIDMYAK G ++ A ++FN  +++ VI+W ++I G   
Sbjct: 382 ARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGS 441

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
           HG  + A++ F +M+  GI P+     S+LSAC+   +++ G++
Sbjct: 442 HGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGRE 485



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 192/379 (50%), Gaps = 9/379 (2%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
             ++ AY   G +R A+ +F+  P KN  +W+++I GY+  G   EA  LF +M  EG  
Sbjct: 200 TAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVD 259

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            +  ++   L+ C   G L  G + H   ++   D N  V+  L+ MY+KCK +  A ++
Sbjct: 260 VTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHV 319

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F    D +  V+W  MI G +QNG    A+  F  M++E V+ + FT  S++ A A +S 
Sbjct: 320 FDEL-DRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISD 378

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
                 +HG  +    + +VYV +ALIDMYAKCG ++ AR L   +   + ++WN+MI G
Sbjct: 379 PLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHG 438

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEG 369
           +   GF K A+ LF++M +  I  ++ T+ SVL+ C  + +     +   S+    G E 
Sbjct: 439 YGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEP 498

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLM-QDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
                  ++D+  + G LD A+     M  D  +  + +++  C  H + E  L   S  
Sbjct: 499 GMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVE--LAEESAQ 556

Query: 429 RISGICPD----HVVVSSI 443
           +I  + P     HV++++I
Sbjct: 557 KIFELGPQEGVYHVLLANI 575



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 138/275 (50%), Gaps = 10/275 (3%)

Query: 50  GEIDEAGQLFEKMS----DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           G +DE  ++ E +     D +    N +I  Y+   R+  A  +F+E   +   +W+++I
Sbjct: 276 GCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMI 335

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVL-RLCSLKGLLQRGEQFHGYAIKTCF 164
            G +  G   +A  LF +MQLE  +P  +TL +V+  L  +   LQ     HGY+I+   
Sbjct: 336 LGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQ-ARWIHGYSIRLHL 394

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
           D + +V+T L+DMYAKC  +  A  LF    + ++ + W  MI GY  +G+G  A+E F 
Sbjct: 395 DQDVYVLTALIDMYAKCGRVNIARILFNSARE-RHVITWNAMIHGYGSHGFGKAAVELFE 453

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKC 283
           +M+  G+  N+ TF S+L+AC+     D G +    +    G E  +     ++D+  + 
Sbjct: 454 EMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRA 513

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
           G LD A   ++   +D  +S    ++G  +   HK
Sbjct: 514 GKLDEAWAFIQKMPMDPGLSVYGAMLGACK--LHK 546



 Score = 45.1 bits (105), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 38/138 (27%)

Query: 23  ARYTHNVGNSVKPASDLN----RALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAY 77
           AR+ H  G S++   D +     AL+D ++  G ++ A  LF    +R   TWN MI   
Sbjct: 382 ARWIH--GYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMI--- 436

Query: 78  ANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLD 137
                                       +GY ++G    A ELF +M+  G  P++ T  
Sbjct: 437 ----------------------------HGYGSHGFGKAAVELFEEMKSIGIVPNETTFL 468

Query: 138 NVLRLCSLKGLLQRGEQF 155
           +VL  CS  GL+  G ++
Sbjct: 469 SVLSACSHAGLVDEGREY 486


>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
          Length = 734

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 269/694 (38%), Positives = 404/694 (58%), Gaps = 3/694 (0%)

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
           A   F  M   G  P   T  ++L+LC+ +G L  G   H        D  A   T L +
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIE-CFRDMRVEGVESNQ 235
           MYAKC+   +A  +F   P  ++ VAW  ++ GY++NG    A+E   R    EG   + 
Sbjct: 103 MYAKCRRPADARRVFDRMP-VRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDS 161

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            T  S+L ACA   A     + H   + SG E  V V +A++D Y KCGD+ +AR + ++
Sbjct: 162 ITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDW 221

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               N VSWN+MI G+A+ G  +EAL+LF +M    + + D +  + L        L+  
Sbjct: 222 MPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEG 281

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
             VH L+V+ G +    V NALI MY+K   +D A  VF+ +  +  +SW ++I GCA +
Sbjct: 282 MRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQN 341

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G  E+A++ F+ M++  + PD   + S++ A A+++     + +H   ++      + V 
Sbjct: 342 GCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVL 401

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
            +L+ +YAKCG +N A  +F+S   R VITW A+I G   +G GK A++ +++M + G  
Sbjct: 402 TALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIV 461

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           P+  TF+ +L ACSHAGL +  R YF SM + YG++PG +HY  M+DLLGR+GKL EA A
Sbjct: 462 PNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWA 521

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
            + +M  +P  +V+ A+L AC++H ++EL E +A  +FEL P   + +V L+N+Y+ A  
Sbjct: 522 FIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASM 581

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
           W+D ARVR  M+  G++K PG S ++  +++H F S    H    +IYS++ +++  IK 
Sbjct: 582 WKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKA 641

Query: 716 AGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
            GYVPD + ++H+VE++ K   L  HSEKLA+AFGL+    G  I+I KNLRVC DCH A
Sbjct: 642 VGYVPDTD-SIHDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCNDCHNA 700

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            K IS V  R II+RD  RFHHFK G CSCGDYW
Sbjct: 701 TKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 134/404 (33%), Positives = 219/404 (54%), Gaps = 2/404 (0%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            QL  +  D +      +   YA   R  +A+++F+  P ++   W++L+ GY+  GL  
Sbjct: 83  AQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLAR 142

Query: 116 EAFELFWQMQ-LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
            A E+  +MQ  EG RP   TL +VL  C+    L    + H +AI++  +    V T +
Sbjct: 143 MAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAI 202

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           +D Y KC  I  A  +F   P  KN V+W  MI GY+QNG   +A+  F  M  EGV+  
Sbjct: 203 LDAYCKCGDIRAARVVFDWMPT-KNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVT 261

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
             +  + L AC  +   D G +VH  ++  G ++NV V +ALI MY+KC  +D A  + +
Sbjct: 262 DVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFD 321

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
             +   +VSWN+MI+G A+ G  ++A+ LF +M   ++K D FT  SV+   A   D   
Sbjct: 322 ELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQ 381

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
           A+ +H   ++   +   +V  ALIDMYAK G ++ A ++FN  +++ VI+W ++I G   
Sbjct: 382 ARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGS 441

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
           HG  + A++ F +M+  GI P+     S+LSAC+   +++ G++
Sbjct: 442 HGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGRE 485



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 192/379 (50%), Gaps = 9/379 (2%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
             ++ AY   G +R A+ +F+  P KN  +W+++I GY+  G   EA  LF +M  EG  
Sbjct: 200 TAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVD 259

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            +  ++   L+ C   G L  G + H   ++   D N  V+  L+ MY+KCK +  A ++
Sbjct: 260 VTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHV 319

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F    D +  V+W  MI G +QNG    A+  F  M++E V+ + FT  S++ A A +S 
Sbjct: 320 FDEL-DRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISD 378

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
                 +HG  +    + +VYV +ALIDMYAKCG ++ AR L   +   + ++WN+MI G
Sbjct: 379 PLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHG 438

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEG 369
           +   GF K A+ LF++M +  I  ++ T+ SVL+ C  + +     +   S+    G E 
Sbjct: 439 YGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEP 498

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLM-QDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
                  ++D+  + G LD A+     M  D  +  + +++  C  H + E  L   S  
Sbjct: 499 GMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVE--LAEESAQ 556

Query: 429 RISGICPD----HVVVSSI 443
           +I  + P     HV++++I
Sbjct: 557 KIFELGPQEGVYHVLLANI 575



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 138/275 (50%), Gaps = 10/275 (3%)

Query: 50  GEIDEAGQLFEKMS----DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           G +DE  ++ E +     D +    N +I  Y+   R+  A  +F+E   +   +W+++I
Sbjct: 276 GCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMI 335

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVL-RLCSLKGLLQRGEQFHGYAIKTCF 164
            G +  G   +A  LF +MQLE  +P  +TL +V+  L  +   LQ     HGY+I+   
Sbjct: 336 LGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQ-ARWIHGYSIRLHL 394

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
           D + +V+T L+DMYAKC  +  A  LF    + ++ + W  MI GY  +G+G  A+E F 
Sbjct: 395 DQDVYVLTALIDMYAKCGRVNIARILFNSARE-RHVITWNAMIHGYGSHGFGKAAVELFE 453

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKC 283
           +M+  G+  N+ TF S+L+AC+     D G +    +    G E  +     ++D+  + 
Sbjct: 454 EMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRA 513

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
           G LD A   ++   +D  +S    ++G  +   HK
Sbjct: 514 GKLDEAWAFIQKMPMDPGLSVYGAMLGACK--LHK 546



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 38/138 (27%)

Query: 23  ARYTHNVGNSVKPASDLN----RALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAY 77
           AR+ H  G S++   D +     AL+D ++  G ++ A  LF    +R   TWN MI   
Sbjct: 382 ARWIH--GYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMI--- 436

Query: 78  ANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLD 137
                                       +GY ++G    A ELF +M+  G  P++ T  
Sbjct: 437 ----------------------------HGYGSHGFGKAAVELFEEMKSIGIVPNETTFL 468

Query: 138 NVLRLCSLKGLLQRGEQF 155
           +VL  CS  GL+  G ++
Sbjct: 469 SVLSACSHAGLVDEGREY 486


>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 923

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 277/741 (37%), Positives = 426/741 (57%), Gaps = 3/741 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGY- 129
           N++I+   N GR+ +A+KLF     ++  +W++L+  YS+ GL  ++F +F  M+  G  
Sbjct: 184 NSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLL 243

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           R    TL +++ +C+    +  G   H   ++T       VV  LV+MY+    + +AE+
Sbjct: 244 RHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEF 303

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           LF      ++ ++W TMI+ Y QNG    A++    +       ++ TF S L AC++  
Sbjct: 304 LFWNMSR-RDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPG 362

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
           A   G  VH   L      N+ V ++LI MY KC  ++ A R+ +     + VS N +I 
Sbjct: 363 ALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIG 422

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN-AKSVHSLIVKTGFE 368
            +A      +A+ +F  M   ++K++  T  ++L  F S+ DL N    +H+  +  GF 
Sbjct: 423 SYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFL 482

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
              +V+N+LI MYAK G+L+ +  VF  + ++ V+SW ++I     HG  EE+LK F DM
Sbjct: 483 SDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDM 542

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
           R  G   DH+ ++  +S+ A L  LE G Q+H + LK G  +   V N+ + +Y KCG +
Sbjct: 543 RHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKM 602

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
           ++  ++      R    W  LI G A+ G  KEA + +  M++ G  PDY+TFV LL AC
Sbjct: 603 DEMLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVTLLSAC 662

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           SHAGL +    Y+ SM  V+G+ PG  H  C++D+LGR G+  EA+  ++ M   P+  +
Sbjct: 663 SHAGLVDKGIDYYNSMSSVFGVSPGIKHCVCIVDILGRLGRFAEAEKFIEDMPVLPNDLI 722

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           W++LLS+ R H +L++G +AA  L EL+P +   YV LSN+Y+T+ +W D  RVR  MK+
Sbjct: 723 WRSLLSSSRTHKNLDIGRKAAKRLLELDPFDDSAYVLLSNLYATSARWSDVDRVRSHMKT 782

Query: 669 RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHN 728
             + K P CSW++   +V  F   D  H     IY K+DEI+L ++E GYV D + ALH+
Sbjct: 783 INLNKIPACSWLKQKKEVSTFGIGDHSHKHADKIYMKLDEILLKLREVGYVADTSSALHD 842

Query: 729 VEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHII 788
            +EE KE  L  HSEKLA+A+GL+T+P+G  +RIFKNLRVC DCH   K +S V+ R I+
Sbjct: 843 TDEEQKEQNLWNHSEKLALAYGLITVPEGCTVRIFKNLRVCADCHLVFKLVSMVFDREIV 902

Query: 789 LRDSNRFHHFKAGNCSCGDYW 809
           LRD  RFHHFK G+CSC D+W
Sbjct: 903 LRDPYRFHHFKGGSCSCSDFW 923



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 159/614 (25%), Positives = 271/614 (44%), Gaps = 49/614 (7%)

Query: 56  GQLFEKMSDRDGFTWNTMIAA-----YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSN 110
           G     ++ + G   N  I       Y +   + +A++LF E P +N  +W++L+   S+
Sbjct: 63  GAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSS 122

Query: 111 YGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV 170
            G   EA   + +M+ E    +      V+ LC        G Q   + I +       V
Sbjct: 123 NGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSV 182

Query: 171 VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG 230
              L+ M      + +AE LF    + ++ V+W  +++ YS  G   K+   F DMR  G
Sbjct: 183 ANSLISMLGNLGRVHDAEKLFYRMEE-RDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGG 241

Query: 231 -VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
            +  +  T  S+++ CA+     +G+ VH   L +G  + + V +AL++MY+  G L  A
Sbjct: 242 LLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADA 301

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
             L       + +SWN+MI  + + G + +AL    ++   +   D  T+ S L   +S 
Sbjct: 302 EFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSP 361

Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
             L + + VH++ ++        V N+LI MY K  +++ A  +F LM + DV+S   LI
Sbjct: 362 GALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILI 421

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLE-FGQQVHAVFLKSGG 468
              A      +A++ F  MR   +  +++ + +IL +      L  +G  +HA  + +G 
Sbjct: 422 GSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGF 481

Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
            S   V NSL+ +YAKCG +  +N VF  +  R V++W A+I    Q+G G+E+L+ +  
Sbjct: 482 LSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMD 541

Query: 529 MLARGTKPDYITFV-------------------GLLFACSHAGLAENARWYFESMDKVYG 569
           M   G   D+I                      GL   C   GL  ++     +MD +YG
Sbjct: 542 MRHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKC---GLGNDSHVVNAAMD-MYG 597

Query: 570 --------IKPGPDH-------YACMIDLLGRSGKLIEAKALLDQMVG---EPDATVWKA 611
                   +K  PD        +  +I    R G   EA+     M+     PD   +  
Sbjct: 598 KCGKMDEMLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVT 657

Query: 612 LLSACRVHGDLELG 625
           LLSAC   G ++ G
Sbjct: 658 LLSACSHAGLVDKG 671



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 184/368 (50%), Gaps = 2/368 (0%)

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA-VSAR 251
           M  D +   +W T I+G  + G    A    R MR  GV  + F   S++TAC      R
Sbjct: 1   MPDDHRTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGR 60

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
             GA +H     +G   NVY+ +AL+ +Y     +  A+RL       N VSW +++V  
Sbjct: 61  ACGAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVAL 120

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
           +  G  +EAL  +++M    I  +   + +V++   S  D      V S ++ +G +   
Sbjct: 121 SSNGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQV 180

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
            V N+LI M    G +  A  +F  M+++D +SW +L++  ++ G   ++ + FSDMR  
Sbjct: 181 SVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRG 240

Query: 432 GICP-DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
           G+   D   + S++S CA    + +G  VH++ L++G  S + V N+LV +Y+  G + D
Sbjct: 241 GLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLAD 300

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           A  +F +M  RD+I+W  +I    QNG   +AL+   Q+L     PD +TF   L ACS 
Sbjct: 301 AEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSS 360

Query: 551 AGLAENAR 558
            G   + R
Sbjct: 361 PGALMDGR 368



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 125/417 (29%), Positives = 199/417 (47%), Gaps = 34/417 (8%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           ALV+ +S++G++ +A  LF  MS RD  +WNTMI++Y  +G   +A K   +    N   
Sbjct: 287 ALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTN--- 343

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
                                     EG  P + T  + L  CS  G L  G   H   +
Sbjct: 344 --------------------------EG--PDRMTFSSALGACSSPGALMDGRMVHAMTL 375

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAI 220
           +     N  V   L+ MY KC  I +AE +F++ P+  + V+   +I  Y+    G KA+
Sbjct: 376 QLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPN-HDVVSCNILIGSYAVLEDGTKAM 434

Query: 221 ECFRDMRVEGVESNQFTFPSILTA-CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           + F  MR   V+ N  T  +IL +  ++   R++G  +H   + +GF ++ YV ++LI M
Sbjct: 435 QVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLITM 494

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           YAKCGDL+S+  + +     + VSWN+MI    + G  +E+L LF  M      +D    
Sbjct: 495 YAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHDGNGLDHICL 554

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
              ++  AS   L     +H L +K G      V NA +DMY K G +D    +      
Sbjct: 555 AECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKMDEMLKMLPDPAI 614

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
           +    W +LI+G A +G ++EA + F  M   G  PD+V   ++LSAC+   +++ G
Sbjct: 615 RPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVTLLSACSHAGLVDKG 671



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 100/410 (24%), Positives = 169/410 (41%), Gaps = 46/410 (11%)

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSL 361
           SW + I G  R G    A S+ + M  R + +  F   S++  C           ++H+L
Sbjct: 10  SWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACGAAIHAL 69

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
             K G     ++  AL+ +Y  Q ++  A  +F  M +++V+SWT+L+   + +G  EEA
Sbjct: 70  TQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGHLEEA 129

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           L Y+  MR   I  +    ++++S C  L     G QV +  + SG    +SV NSL+ +
Sbjct: 130 LGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLISM 189

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG-TKPDYIT 540
               G ++DA ++F  M  RD ++W AL+   +  G   ++ + +  M   G  + D  T
Sbjct: 190 LGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATT 249

Query: 541 FVGLLFAC-----------------------------------SHAGLAENARWYFESMD 565
              L+  C                                   S AG   +A + F +M 
Sbjct: 250 LCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMS 309

Query: 566 KVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE---PDATVWKALLSACRVHGDL 622
           +   I      +  MI    ++G  ++A   L Q++     PD   + + L AC   G L
Sbjct: 310 RRDLIS-----WNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGAL 364

Query: 623 ELGERAANNLFELE-PMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
             G        +L    N +    L  MY      EDA R+ +LM +  +
Sbjct: 365 MDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDV 414



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 138/302 (45%), Gaps = 14/302 (4%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +  N++I  YA  G L  +  +F     ++  +W+++I     +G   E+ +LF  M+
Sbjct: 484 DDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMR 543

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            +G       L   +   +    L+ G Q HG  +K     ++ VV   +DMY KC  + 
Sbjct: 544 HDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKMD 603

Query: 186 EAEYLFKMFPDG--KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           E   + KM PD   +    W T+I+GY++ GY  +A E F+ M   G   +  TF ++L+
Sbjct: 604 E---MLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVTLLS 660

Query: 244 ACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLE-YSEIDNE 301
           AC+     D G   +  + S  G    +     ++D+  + G    A + +E    + N+
Sbjct: 661 ACSHAGLVDKGIDYYNSMSSVFGVSPGIKHCVCIVDILGRLGRFAEAEKFIEDMPVLPND 720

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF---TYPSVLNCFASNIDLNNAKSV 358
           + W S++   +    HK  L + +K   R +++D F    Y  + N +A++   ++   V
Sbjct: 721 LIWRSLL---SSSRTHKN-LDIGRKAAKRLLELDPFDDSAYVLLSNLYATSARWSDVDRV 776

Query: 359 HS 360
            S
Sbjct: 777 RS 778


>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1274

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 288/750 (38%), Positives = 428/750 (57%), Gaps = 6/750 (0%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           +D   W   +  + + G+L  A+++F+  P  +   +++LI  YS  G    A +L+  M
Sbjct: 32  KDKKQWQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSM 91

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
                 P++YT   VL+ CS    L+ G   H +A       + FV T L+D+Y +C   
Sbjct: 92  LRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARF 151

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILT 243
             A  +F   P  ++ VAW  M+ GY+ +G    AI    DM+  G +  N  T  S+L 
Sbjct: 152 GPARNVFAKMP-MRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLP 210

Query: 244 ACAAVSARDFGAQVHGCILSSGFEAN---VYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
             A   A   G  +H   L +  E N   V + +AL+DMYAKC  L  A R+     + N
Sbjct: 211 LLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRN 270

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIK-IDDFTYPSVLNCFASNIDLNNAKSVH 359
           +V+W+++I GF       EA +LFK M    +  +   +  S L   AS  DL+    +H
Sbjct: 271 DVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLH 330

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
           +LI K+G       +N+L+ MYAK G ++ A M F+ +  KD IS+ +L++GC  +G  E
Sbjct: 331 ALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAE 390

Query: 420 EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
           EA   F  M+   + PD   + S++ AC+ L  L+ G+  H   +  G     S+ NSL+
Sbjct: 391 EAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLI 450

Query: 480 LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
            +YAKCG I+ + +VFD M  RDV++W  +I G   +G GKEA   +  M  +G  PD +
Sbjct: 451 DMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDV 510

Query: 540 TFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ 599
           TF+ L+ ACSH+GL    + +F++M   YGI P  +HY CM+DLL R G L EA   +  
Sbjct: 511 TFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQS 570

Query: 600 MVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDA 659
           M  + D  VW ALL ACR+H +++LG++ +  + +L P     +V LSN++S AG++++A
Sbjct: 571 MPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEA 630

Query: 660 ARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYV 719
           A VR + K +G +K PG SW+E N  +H F+  D+ HP   DIY ++D IM+ IK+ GY 
Sbjct: 631 AEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQ 690

Query: 720 PDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYI 779
            D +F L ++EEE KE  L YHSEKLA+AFG+L+L +   I + KNLRVCGDCHTA+KY+
Sbjct: 691 ADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYM 750

Query: 780 SAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           + V  R II+RD+NRFHHFK G CSCG++W
Sbjct: 751 TLVRNRTIIVRDTNRFHHFKNGQCSCGNFW 780



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 41/172 (23%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           +L+D ++  G+ID + Q+F+KM  RD  +WNTMIA                         
Sbjct: 448 SLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIA------------------------- 482

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF----- 155
                 GY  +GL  EA  LF  M+ +G+ P   T   ++  CS  GL+  G+ +     
Sbjct: 483 ------GYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMT 536

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
           H Y I     +  ++   +VD+ A+   + EA    +  P   +   W  ++
Sbjct: 537 HKYGILP--RMEHYIC--MVDLLARGGLLDEAYQFIQSMPLKADVRVWGALL 584


>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 705

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 254/667 (38%), Positives = 397/667 (59%), Gaps = 44/667 (6%)

Query: 177 MYAKCKCIFEAEYLFKM--FPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           +Y+    + ++  LF    FP     +AW ++I  Y+ +G   +++  F  M   G+  +
Sbjct: 49  IYSHINLLHDSLRLFNTIHFPPA---LAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPD 105

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK------------ 282
              FPS+L +CA +   + G  +HG I+  G + ++Y  +AL++MY+K            
Sbjct: 106 HNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRL 165

Query: 283 -CGDL-------------------DSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
             G++                   DS R++ E     + VSWN++I G AR G ++E L 
Sbjct: 166 GAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLR 225

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYA 382
           + ++M   ++K D FT  SVL   A N+D++  K +H   ++ G +   +V ++LIDMYA
Sbjct: 226 MIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYA 285

Query: 383 KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
           K   +  +  VF L+ ++D ISW S+I GC  +G ++E L++F  M ++ I P     SS
Sbjct: 286 KCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSS 345

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
           I+ ACA LT L  G+Q+H    ++G   ++ + +SLV +YAKCG I  A ++FD M  RD
Sbjct: 346 IMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRD 405

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
           +++WTA+IMGCA +G+  +A++ ++QM   G K        +L ACSH GL + A  YF 
Sbjct: 406 MVSWTAMIMGCALHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWKYFN 458

Query: 563 SMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDL 622
           SM + +GI PG +HYA + DLLGR+G+L EA   +  M   P  ++W  LLSACRVH ++
Sbjct: 459 SMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNI 518

Query: 623 ELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVET 682
           ++ E+ AN + E++P N   Y+ L+N+YS A +W++AA+ R  M+  GIRK P CSW+E 
Sbjct: 519 DMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEV 578

Query: 683 NSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHS 742
            ++V+ F++ D  HP    I   ++ ++ L+++ GYVPD +   H+VEEE K+  +  HS
Sbjct: 579 KNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHS 638

Query: 743 EKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGN 802
           E+LA+ FG++  P G  IR+ KNLRVC DCHTA K+IS +  R I++RD++RFHHFK G 
Sbjct: 639 ERLAIVFGIINTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGT 698

Query: 803 CSCGDYW 809
           CSCGDYW
Sbjct: 699 CSCGDYW 705



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 205/405 (50%), Gaps = 42/405 (10%)

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
           Y++   L ++ +LFN   F     W S+I  Y+++GL  ++   F  M   G  P     
Sbjct: 50  YSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVF 109

Query: 137 DNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA--------- 187
            +VL+ C+L   L  GE  HGY I+   D + +    L++MY+K + + E+         
Sbjct: 110 PSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGE 169

Query: 188 -----------------------EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
                                    +F+M P+ K+ V+W T+I G ++NG   + +   R
Sbjct: 170 VFDEMTERTRSVRTVSVLSEDSVRKIFEMMPE-KDLVSWNTIIAGNARNGLYEETLRMIR 228

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
           +M    ++ + FT  S+L   A       G ++HGC +  G +A++YV S+LIDMYAKC 
Sbjct: 229 EMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288

Query: 285 DL-DSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
            + DS R     +E D  +SWNS+I G  + G   E L  F++M    IK   +++ S++
Sbjct: 289 RVADSCRVFTLLTERDG-ISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIM 347

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVI 403
              A    L+  K +H  I + GF+   F+ ++L+DMYAK GN+  A  +F+ M+ +D++
Sbjct: 348 PACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMV 407

Query: 404 SWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
           SWT++I GCA HG   +A++ F  M   GI        ++L+AC+
Sbjct: 408 SWTAMIMGCALHGQAPDAIELFEQMETEGI-------KAVLTACS 445



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 216/402 (53%), Gaps = 30/402 (7%)

Query: 55  AGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLD 114
           AG++F++M++R   T +    +  +   +R   K+F   P K+  +W+++I G +  GL 
Sbjct: 167 AGEVFDEMTER---TRSVRTVSVLSEDSVR---KIFEMMPEKDLVSWNTIIAGNARNGLY 220

Query: 115 IEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
            E   +  +M     +P  +TL +VL L +    + RG++ HG +I+   D + +V + L
Sbjct: 221 EETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSL 280

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           +DMYAKC  + ++  +F +  + ++ ++W ++I G  QNG   + +  FR M +  ++  
Sbjct: 281 IDMYAKCTRVADSCRVFTLLTE-RDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPK 339

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
            ++F SI+ ACA ++    G Q+HG I  +GF+ N+++ S+L+DMYAKCG++ +A+++ +
Sbjct: 340 SYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFD 399

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
              + + VSW +MI+G A  G   +A+ LF++M    IK       +VL   +    ++ 
Sbjct: 400 RMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDE 452

Query: 355 A-KSVHSLI----VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSL 408
           A K  +S+     +  G E Y  V+    D+  + G L+ A+     M      S W +L
Sbjct: 453 AWKYFNSMTRDFGIAPGVEHYAAVS----DLLGRAGRLEEAYDFICGMHIGPTGSIWATL 508

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPD----HVVVSSILSA 446
           ++ C  H + + A K  +  RI  + P+    ++++++I SA
Sbjct: 509 LSACRVHKNIDMAEKVAN--RILEVDPNNTGAYILLANIYSA 548



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 198/425 (46%), Gaps = 45/425 (10%)

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID-MYAKCGDLDSARR 291
           S +    ++L    ++ +R    Q+H  +L   F+A+     +L+  +Y+    L  + R
Sbjct: 4   STEALVKALLRNPLSIKSRSQAQQLHAQVLK--FQASSLCNLSLLLSIYSHINLLHDSLR 61

Query: 292 LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID 351
           L         ++W S+I  +   G   ++L  F  M A  +  D   +PSVL   A  +D
Sbjct: 62  LFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMD 121

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL------------------------ 387
           LN  +S+H  I++ G +   +  NAL++MY+K   L                        
Sbjct: 122 LNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSV 181

Query: 388 --------DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVV 439
                   D    +F +M +KD++SW ++I G A +G YEE L+   +M  + + PD   
Sbjct: 182 RTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFT 241

Query: 440 VSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH 499
           +SS+L   AE   +  G+++H   ++ G  + + V +SL+ +YAKC  + D+ RVF  + 
Sbjct: 242 LSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLT 301

Query: 500 TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW 559
            RD I+W ++I GC QNG   E L+F+ QML    KP   +F  ++ AC+H         
Sbjct: 302 ERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHL-----TTL 356

Query: 560 YFESMDKVYGIKPGPDH----YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
           +       Y  + G D      + ++D+  + G +  AK + D+M    D   W A++  
Sbjct: 357 HLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLR-DMVSWTAMIMG 415

Query: 616 CRVHG 620
           C +HG
Sbjct: 416 CALHG 420



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 118/247 (47%), Gaps = 11/247 (4%)

Query: 44  VDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSS 103
           VD S   EI   G    +  D D +  +++I  YA   R+ ++ ++F     ++  +W+S
Sbjct: 253 VDISRGKEIH--GCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNS 310

Query: 104 LIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC 163
           +I G    GL  E    F QM +   +P  Y+  +++  C+    L  G+Q HGY  +  
Sbjct: 311 IIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNG 370

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
           FD N F+ + LVDMYAKC  I  A+ +F      ++ V+WT MI G + +G    AIE F
Sbjct: 371 FDENIFIASSLVDMYAKCGNIRTAKQIFDRM-RLRDMVSWTAMIMGCALHGQAPDAIELF 429

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAK 282
             M  EG++       ++LTAC+     D   +    +    G    V   +A+ D+  +
Sbjct: 430 EQMETEGIK-------AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGR 482

Query: 283 CGDLDSA 289
            G L+ A
Sbjct: 483 AGRLEEA 489


>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
 gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
          Length = 903

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 283/772 (36%), Positives = 433/772 (56%), Gaps = 49/772 (6%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           + + G +  A  LFE+M +RD  +WN  IAA A SG                        
Sbjct: 173 YGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSG------------------------ 207

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                  LD+ A ELF +MQLEG RP++ TL   L +C+    +++    H    ++  +
Sbjct: 208 ------DLDM-ALELFQRMQLEGVRPARITLVITLSVCAK---IRQARAIHSIVRESGLE 257

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
               V T L   YA+   + +A+ +F    + ++ V+W  M+  Y+Q+G+  +A   F  
Sbjct: 258 QTLVVSTALASAYARLGHLDQAKEVFDRAAE-RDVVSWNAMLGAYAQHGHMSEAALLFAR 316

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M  EG+  ++ T  +  T C+++    FG  +H C L  G + ++ + +AL+DMY +CG 
Sbjct: 317 MLHEGIPPSKVTLVNASTGCSSLR---FGRMIHACALEKGLDRDIVLGNALLDMYTRCGS 373

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
            + AR L E     N VSWN+MI G +++G  K AL LF++M    +     TY ++L  
Sbjct: 374 PEEARHLFEGIP-GNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEA 432

Query: 346 FASNID----LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN--LMQD 399
            ASN +    +   + +HS IV  G+     +  A++ MYA  G +D A   F    M+D
Sbjct: 433 VASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMED 492

Query: 400 K-DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
           + DV+SW ++I+  + HG  + AL +F  M + G+ P+ +   ++L ACA    L  G  
Sbjct: 493 RHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVI 552

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT-RDVITWTALIMGCAQNG 517
           VH     SG  S++ V  +L  +Y +CG +  A  +F+ +   RDV+ + A+I   +QNG
Sbjct: 553 VHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNG 612

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY 577
              EAL+ + +M   G++PD  +FV +L ACSH GLA+     F SM + YGI P  DHY
Sbjct: 613 LAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHY 672

Query: 578 ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEP 637
           AC +D+LGR+G L +A+ L+  M  +P   VWK LL ACR + D++ G  A + + EL+P
Sbjct: 673 ACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDP 732

Query: 638 MNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHP 697
            +   YV LSN+ + AGKW++AA VR  M+SRG+RK+ G SW+E  S+VH F++ DR HP
Sbjct: 733 GDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFVAGDRSHP 792

Query: 698 LRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQG 757
              +IY +++ +   I+E GYVPD    L  V+E  KE  L  HSE+LA+A G+++    
Sbjct: 793 RSEEIYRELERLHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMS-SST 851

Query: 758 APIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             +R+ KNLRVC DCH A K+IS +  + I++RD++RFHHF  G+CSCGDYW
Sbjct: 852 DTVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 147/552 (26%), Positives = 273/552 (49%), Gaps = 17/552 (3%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++  Y     L + +++F+    ++  +W+++I  Y+ +G    A  +F +MQ EG R
Sbjct: 66  NHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVR 125

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
               T   VL+ C+  G L +G   H + +++  +  + +   L+ +Y  C C+  A  L
Sbjct: 126 CDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLL 185

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F+     ++ V+W   I   +Q+G    A+E F+ M++EGV   + T    L+ CA +  
Sbjct: 186 FERME--RDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKIRQ 243

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
                 +H  +  SG E  + V +AL   YA+ G LD A+ + + +   + VSWN+M+  
Sbjct: 244 ---ARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGA 300

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           +A+ G   EA  LF +M    I     T   ++N       L   + +H+  ++ G +  
Sbjct: 301 YAQHGHMSEAALLFARMLHEGIPPSKVT---LVNASTGCSSLRFGRMIHACALEKGLDRD 357

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
             + NAL+DMY + G+ + A  +F  +   + +SW ++I G +  G  + AL+ F  M++
Sbjct: 358 IVLGNALLDMYTRCGSPEEARHLFEGIPG-NAVSWNTMIAGSSQKGQMKRALELFQRMQL 416

Query: 431 SGICPDHVVVSSILSACA----ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
            G+ P      ++L A A    E   +  G+++H+  +  G  S  ++  ++V +YA CG
Sbjct: 417 EGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCG 476

Query: 487 CINDANRVFD--SMHTR-DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
            I++A   F   +M  R DV++W A+I   +Q+G GK AL F+ +M   G  P+ IT V 
Sbjct: 477 AIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVA 536

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           +L AC+ A          + + +  G++        +  + GR G L  A+ + +++  E
Sbjct: 537 VLDACAGAAALTEGVIVHDHL-RHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVE 595

Query: 604 PDATVWKALLSA 615
            D  ++ A+++A
Sbjct: 596 RDVVIFNAMIAA 607



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 146/506 (28%), Positives = 248/506 (49%), Gaps = 25/506 (4%)

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           RP+   L  +LR      LL +G + H   +     L   +   L+ +Y KC+ + + E 
Sbjct: 28  RPAH--LVRLLRAAGDDRLLSQGRRIHARIVS--LGLEEELGNHLLRLYLKCESLGDVEE 83

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +F    + ++  +WTT+IT Y+++G   +AI  F  M+ EGV  +  TF ++L ACA + 
Sbjct: 84  VFSRL-EVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLG 142

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
               G  +H  I+ SG E    + + L+ +Y  CG + SA  L E  E D  VSWN+ I 
Sbjct: 143 DLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERMERDL-VSWNAAIA 201

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
             A+ G    AL LF++M    ++    T    L+  A    +  A+++HS++ ++G E 
Sbjct: 202 ANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAK---IRQARAIHSIVRESGLEQ 258

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
              V+ AL   YA+ G+LD A  VF+   ++DV+SW +++   A HG   EA   F+ M 
Sbjct: 259 TLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARML 318

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
             GI P  V + +  + C+    L FG+ +HA  L+ G    + + N+L+ +Y +CG   
Sbjct: 319 HEGIPPSKVTLVNASTGCSS---LRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPE 375

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
           +A  +F+ +   + ++W  +I G +Q G+ K AL+ + +M   G  P   T++ LL A +
Sbjct: 376 EARHLFEGI-PGNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVA 434

Query: 550 H-----AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ--MVG 602
                   +AE  + +   +   Y  +P       ++ +    G + EA A   +  M  
Sbjct: 435 SNPEEARAMAEGRKLHSRIVSCGYASEPAIG--TAVVKMYASCGAIDEAAASFQRGAMED 492

Query: 603 EPDATVWKALLSACRVHGDLELGERA 628
             D   W A++S+   HG    G+RA
Sbjct: 493 RHDVVSWNAIISSLSQHGH---GKRA 515



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 206/437 (47%), Gaps = 35/437 (8%)

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           G ++H  I+S G E  +   + L+ +Y KC  L     +    E+ +E SW ++I  +  
Sbjct: 48  GRRIHARIVSLGLEEEL--GNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTE 105

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
            G  K A+ +F +M    ++ D  T+ +VL   A   DL+  +S+H+ IV++G EG   +
Sbjct: 106 HGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVL 165

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
            N L+ +Y   G +  A ++F  M+ +D++SW + I   A  G  + AL+ F  M++ G+
Sbjct: 166 ANLLLHIYGSCGCVASAMLLFERME-RDLVSWNAAIAANAQSGDLDMALELFQRMQLEGV 224

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
            P  + +   LS CA+   +   + +H++  +SG   +L V  +L   YA+ G ++ A  
Sbjct: 225 RPARITLVITLSVCAK---IRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKE 281

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGL 553
           VFD    RDV++W A++   AQ+G   EA   + +ML  G  P  +T V     CS    
Sbjct: 282 VFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSS--- 338

Query: 554 AENARWYFESMDKVYGIKPGPDHYA----CMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
                  F  M     ++ G D        ++D+  R G   EA+ L + + G  +A  W
Sbjct: 339 -----LRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPG--NAVSW 391

Query: 610 KALLSACRVHGD----LELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDA---ARV 662
             +++     G     LEL +R      +LE M  +    L+ + + A   E+A   A  
Sbjct: 392 NTMIAGSSQKGQMKRALELFQR-----MQLEGMAPVRATYLNLLEAVASNPEEARAMAEG 446

Query: 663 RKL---MKSRGIRKEPG 676
           RKL   + S G   EP 
Sbjct: 447 RKLHSRIVSCGYASEPA 463


>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 271/674 (40%), Positives = 389/674 (57%), Gaps = 3/674 (0%)

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           +VL+ C      Q G++ HG+ +K   D + FV   L+ MY +C C+  A  +F    + 
Sbjct: 99  SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMME- 157

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           ++ V+W+TMI   S+N     A+E  R+M    V  ++    S++   A  +    G  +
Sbjct: 158 RDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAM 217

Query: 258 HGCIL--SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           H  ++  S+     V   +AL+DMYAKCG L  AR+L         VSW +MI G  R  
Sbjct: 218 HAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSN 277

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
             +E   LF +M   +I  ++ T  S++        L   K +H+ I++ GF     +  
Sbjct: 278 RLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALAT 337

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
           AL+DMY K  ++  A  +F+  Q++DV+ WT++++  A     ++A   F  MR SG+ P
Sbjct: 338 ALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRP 397

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
             V + S+LS CA    L+ G+ VH+   K        ++ +LV +YAKCG IN A R+F
Sbjct: 398 TKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLF 457

Query: 496 DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAE 555
               +RD+  W A+I G A +G G+EAL  + +M  +G KP+ ITF+GLL ACSHAGL  
Sbjct: 458 IEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVT 517

Query: 556 NARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
             +  FE M   +G+ P  +HY CM+DLLGR+G L EA  ++  M  +P+  VW AL++A
Sbjct: 518 EGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAA 577

Query: 616 CRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEP 675
           CR+H + +LGE AA  L E+EP N    V +SN+Y+ A +W DAA VRK MK+ G++KEP
Sbjct: 578 CRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEP 637

Query: 676 GCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKE 735
           G S +E N  VH F+  D+ HP    I   + E+   + EAGYVPD +  L N++EE KE
Sbjct: 638 GHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKE 697

Query: 736 IGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRF 795
             L YHSEKLA+AFGL++     PIRI KNLRVC DCH A K +S +Y R II+RD NRF
Sbjct: 698 TALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRF 757

Query: 796 HHFKAGNCSCGDYW 809
           HHF+ G CSCGDYW
Sbjct: 758 HHFREGYCSCGDYW 771



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/409 (30%), Positives = 212/409 (51%), Gaps = 7/409 (1%)

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
           F  PS+L AC  VS    G ++HG +L  G + +V+V +AL+ MY +C  ++ AR + + 
Sbjct: 95  FMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDK 154

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               + VSW++MI   +R      AL L ++M+   ++  +    S++N FA   ++   
Sbjct: 155 MMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMG 214

Query: 356 KSVHSLIVKTGFEGYKFV--NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
           K++H+ +++     +  V    AL+DMYAK G+L  A  +FN +  K V+SWT++I GC 
Sbjct: 215 KAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCI 274

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
                EE  K F  M+   I P+ + + S++  C     L+ G+Q+HA  L++G   SL+
Sbjct: 275 RSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLA 334

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
           +  +LV +Y KC  I +A  +FDS   RDV+ WTA++   AQ     +A   +DQM   G
Sbjct: 335 LATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSG 394

Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
            +P  +T V LL  C+ AG  +  +W    +DK   ++        ++D+  + G +  A
Sbjct: 395 VRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKER-VEVDCILNTALVDMYAKCGDINAA 453

Query: 594 KALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
             L  + +   D  +W A+++   +HG    GE A +   E+E     P
Sbjct: 454 GRLFIEAISR-DICMWNAIITGFAMHG---YGEEALDIFAEMERQGVKP 498



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/463 (28%), Positives = 235/463 (50%), Gaps = 7/463 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS-NYGLD 114
           G + +K  DRD F  N ++  Y     +  A+ +F++   ++  +WS++I   S N   D
Sbjct: 118 GFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFD 177

Query: 115 IEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD--LNAFVVT 172
           + A EL  +M     RPS+  + +++ L +    ++ G+  H Y I+   +  +     T
Sbjct: 178 M-ALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTT 236

Query: 173 GLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
            L+DMYAKC  +  A  LF      K  V+WT MI G  ++    +  + F  M+ E + 
Sbjct: 237 ALLDMYAKCGHLGLARQLFNGLTQ-KTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIF 295

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
            N+ T  S++  C    A   G Q+H  IL +GF  ++ + +AL+DMY KC D+ +AR L
Sbjct: 296 PNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARAL 355

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
            + ++  + + W +M+  +A+     +A +LF +M    ++    T  S+L+  A    L
Sbjct: 356 FDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGAL 415

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
           +  K VHS I K   E    +N AL+DMYAK G+++ A  +F     +D+  W ++ITG 
Sbjct: 416 DLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGF 475

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS-GGCSS 471
           A HG  EEAL  F++M   G+ P+ +    +L AC+   ++  G+++    + + G    
Sbjct: 476 AMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQ 535

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
           +     +V +  + G +++A+ +  SM  + + I W AL+  C
Sbjct: 536 IEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAAC 578



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 178/353 (50%), Gaps = 11/353 (3%)

Query: 69  TWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG 128
           T   ++  YA  G L  A++LFN    K   +W+++I G        E  +LF +MQ E 
Sbjct: 234 TTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEEN 293

Query: 129 YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
             P++ T+ +++  C   G LQ G+Q H Y ++  F ++  + T LVDMY KC  I  A 
Sbjct: 294 IFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNAR 353

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
            LF    + ++ + WT M++ Y+Q     +A   F  MR  GV   + T  S+L+ CA  
Sbjct: 354 ALFDSTQN-RDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVA 412

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
            A D G  VH  I     E +  + +AL+DMYAKCGD+++A RL   +   +   WN++I
Sbjct: 413 GALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAII 472

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNA----KSVHSLIV 363
            GFA  G+ +EAL +F +M  + +K +D T+  +L+ C  + +         K VH+  +
Sbjct: 473 TGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGL 532

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYH 415
               E Y      ++D+  + G LD A  +   M  K + I W +L+  C  H
Sbjct: 533 VPQIEHY----GCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLH 581



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 141/282 (50%), Gaps = 4/282 (1%)

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
           +F  PSVL            K +H  ++K G +   FV NAL+ MY +   ++ A +VF+
Sbjct: 94  NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
            M ++DV+SW+++I   + +  ++ AL+   +M    + P  V + S+++  A+   +  
Sbjct: 154 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRM 213

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLV--YAKCGCINDANRVFDSMHTRDVITWTALIMGC 513
           G+ +HA  +++     + V  +  L+  YAKCG +  A ++F+ +  + V++WTA+I GC
Sbjct: 214 GKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGC 273

Query: 514 AQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPG 573
            ++ + +E  + + +M      P+ IT + L+  C   G  +  +     + +  G    
Sbjct: 274 IRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILR-NGFSVS 332

Query: 574 PDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
                 ++D+ G+   +  A+AL D      D  +W A+LSA
Sbjct: 333 LALATALVDMYGKCSDIRNARALFDSTQNR-DVMIWTAMLSA 373



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 33/171 (19%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           LN ALVD ++  G+I+ AG+LF +   RD   WN +I  +A                   
Sbjct: 436 LNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFA------------------- 476

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                  ++GY       EA ++F +M+ +G +P+  T   +L  CS  GL+  G++   
Sbjct: 477 -------MHGYGE-----EALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFE 524

Query: 158 YAIKTCFDLNAFVVTG-LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
             + T   +      G +VD+  +   + EA  + K  P   N + W  ++
Sbjct: 525 KMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALV 575


>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 874

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 285/767 (37%), Positives = 427/767 (55%), Gaps = 44/767 (5%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N+++  Y   G +  A+++F+E   ++  +W+S+I     +     A  LF  M LE   
Sbjct: 124 NSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVG 183

Query: 131 PSQYTLDNVLRLCS--LKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
           P+ +TL +V   CS  + GLL  G+Q H + ++   D   F    LV MYAK   ++EA+
Sbjct: 184 PTSFTLVSVAHACSNLINGLLL-GKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAK 241

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
            LF +F D K+ V+W T+I+  SQN    +A+     M   GV  N  T  S+L AC+ +
Sbjct: 242 TLFDVF-DDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHL 300

Query: 249 SARDFGAQVHGCIL-SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
                G ++H  +L ++    N +V  AL+DMY  C   +  R + +         WN+M
Sbjct: 301 EMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAM 360

Query: 308 IVGFARQGFHKEALSLFKKM-HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           I G+ R  F  EA+ LF +M     +  +  T  SVL          + + +HS +VK G
Sbjct: 361 IAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWG 420

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
           FE  K+V NAL+DMY++ G ++ A  +F  M  KD++SW ++ITG    G +++AL    
Sbjct: 421 FEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLH 480

Query: 427 DM-------RISG-----------ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
           DM       RI+            + P+ V + ++L  CA L  L  G+++HA  +K   
Sbjct: 481 DMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQML 540

Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
              ++V ++LV +YAKCGC+N +  VF+ M  R+VITW  LIM    +GKG+EAL+ + +
Sbjct: 541 SKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRR 600

Query: 529 MLARG-----TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDL 583
           M+  G      +P+ +T++ +  + SH+G+ +     F +M   +GI+P  DHYAC++DL
Sbjct: 601 MVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDL 660

Query: 584 LGRSGKLIEAKALLDQMVGE-PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           LGRSG++ EA  L+  M         W +LL AC++H +LE+GE AA NLF L+P N + 
Sbjct: 661 LGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDP-NVLD 719

Query: 643 YVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDI 702
           Y    +M              + MK +G+RKEPGCSW+E   +VH F++ D  HP   ++
Sbjct: 720 YGTKQSMLG------------RKMKEKGVRKEPGCSWIEHGDEVHKFLAGDVSHPQSKEV 767

Query: 703 YSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRI 762
           +  ++ + L +K+ GYVPD +  LHNV EE KE  L  HSE+LA+AFGLL    G  IR+
Sbjct: 768 HEYLETLSLRMKKEGYVPDTSCVLHNVGEEEKETMLCGHSERLAIAFGLLNTSPGTTIRV 827

Query: 763 FKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            KNLRVC DCH A K+IS +  R IILRD  RFHHF+ G CSCGDYW
Sbjct: 828 AKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 874



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 152/480 (31%), Positives = 228/480 (47%), Gaps = 33/480 (6%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D   FT N ++  YA  GR+ EAK LF+    K+  +W+++I   S      EA      
Sbjct: 218 DWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHV 277

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDL--NAFVVTGLVDMYAKC 181
           M   G RP+  TL +VL  CS   +L  G++ H + +    DL  N+FV   LVDMY  C
Sbjct: 278 MLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNN-DLIENSFVGCALVDMYCNC 336

Query: 182 KCIFEAEYLFK-MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE-GVESNQFTFP 239
           K   +   +F  MF   +    W  MI GY +N + ++AIE F +M  E G+  N  T  
Sbjct: 337 KQPEKGRLVFDGMF--RRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLS 394

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
           S+L AC    +      +H C++  GFE + YVQ+AL+DMY++ G ++ AR +       
Sbjct: 395 SVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRK 454

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHA-----RDIKIDDF-------------TYPS 341
           + VSWN+MI G+   G H +AL+L   M       R    DD+             T  +
Sbjct: 455 DIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMT 514

Query: 342 VLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
           VL   A+   L   K +H+  VK        V +AL+DMYAK G L+ +  VF  M  ++
Sbjct: 515 VLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRN 574

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISG-----ICPDHVVVSSILSACAELTVLEFG 456
           VI+W  LI     HG  EEALK F  M   G     I P+ V   +I ++ +   +++ G
Sbjct: 575 VITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEG 634

Query: 457 QQVHAVFLKSGGCSSLSVDNS-LVLVYAKCGCINDANRVFDSMHT--RDVITWTALIMGC 513
             +        G    S   + LV +  + G I +A  +  +M +  + V  W++L+  C
Sbjct: 635 LNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGAC 694



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 131/436 (30%), Positives = 219/436 (50%), Gaps = 30/436 (6%)

Query: 203 WTTMITGYSQNGYGF-KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI 261
           W + +   +Q+   F +AI  + +M   GV  + F FP++L A A +   + G Q+H  +
Sbjct: 52  WVSHLRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHV 111

Query: 262 LSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEAL 321
              G      V ++L++MY KCGD+D+ARR+ +     ++VSWNSMI    R    + A+
Sbjct: 112 FKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAV 171

Query: 322 SLFKKMHARDIKIDDFTYPSVLNCFASNID-LNNAKSVHSLIVKTGFEGYKFVNNALIDM 380
            LF+ M   ++    FT  SV +  ++ I+ L   K VH+ +++ G +   F NNAL+ M
Sbjct: 172 HLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTM 230

Query: 381 YAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVV 440
           YAK G +  A  +F++  DKD++SW ++I+  + +  +EEAL Y   M  SG+ P+ V +
Sbjct: 231 YAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTL 290

Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSSLS-VDNSLVLVYAKCGCINDANRVFDSMH 499
           +S+L AC+ L +L  G+++HA  L +      S V  +LV +Y  C        VFD M 
Sbjct: 291 ASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMF 350

Query: 500 TRDVITWTALIMGCAQNGKGKEALQFYDQMLAR-GTKPDYITFVGLLFAC-------SHA 551
            R +  W A+I G  +N    EA++ + +M+   G  P+ +T   +L AC          
Sbjct: 351 RRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKE 410

Query: 552 GLAE-NARWYFESMDKVYGIKPGPDHYA--CMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           G+     +W FE            D Y    ++D+  R G++  A+++   M    D   
Sbjct: 411 GIHSCVVKWGFEK-----------DKYVQNALMDMYSRMGRIEIARSIFGSM-NRKDIVS 458

Query: 609 WKALLSA---CRVHGD 621
           W  +++    C  H D
Sbjct: 459 WNTMITGYVVCGRHDD 474



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 146/586 (24%), Positives = 261/586 (44%), Gaps = 41/586 (6%)

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           +A   +  M   G  P  +    VL+  +    L  G+Q H +  K    L   V   LV
Sbjct: 68  QAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLV 127

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           +MY KC  I  A  +F    + ++ V+W +MI    +      A+  FR M +E V    
Sbjct: 128 NMYGKCGDIDAARRVFDEITN-RDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTS 186

Query: 236 FTFPSILTACA-AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
           FT  S+  AC+  ++    G QVH  +L +G +   +  +AL+ MYAK G +  A+ L +
Sbjct: 187 FTLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFD 245

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
             +  + VSWN++I   ++    +EAL     M    ++ +  T  SVL   +    L  
Sbjct: 246 VFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGC 305

Query: 355 AKSVHSLIV-KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
            K +H+ ++         FV  AL+DMY      +   +VF+ M  + +  W ++I G  
Sbjct: 306 GKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYV 365

Query: 414 YHGSYEEALKYFSDMRIS-GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
            +    EA++ F +M    G+ P+ V +SS+L AC         + +H+  +K G     
Sbjct: 366 RNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDK 425

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
            V N+L+ +Y++ G I  A  +F SM+ +D+++W  +I G    G+  +AL     M  R
Sbjct: 426 YVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDM-QR 484

Query: 533 GT-------------------KPDYITFVGLLFACSH-AGLAENARWYFESMDKVYG--I 570
           G                    KP+ +T + +L  C+  A L +    +  ++ ++    +
Sbjct: 485 GQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDV 544

Query: 571 KPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGD----LELGE 626
             G    + ++D+  + G L  ++ + +QM    +   W  L+ A  +HG     L+L  
Sbjct: 545 AVG----SALVDMYAKCGCLNLSRTVFEQMSVR-NVITWNVLIMAYGMHGKGEEALKLFR 599

Query: 627 R---AANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
           R     +N  E+ P N + Y+ +    S +G  ++   +   MK++
Sbjct: 600 RMVEEGDNNREIRP-NEVTYIAIFASLSHSGMVDEGLNLFYTMKAK 644



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 180/381 (47%), Gaps = 28/381 (7%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           + F    ++  Y N  +  + + +F+    +    W+++I GY     D EA ELF +M 
Sbjct: 322 NSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMV 381

Query: 126 LE-GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
            E G  P+  TL +VL  C         E  H   +K  F+ + +V   L+DMY++   I
Sbjct: 382 FELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRI 441

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE------------ 232
             A  +F    + K+ V+W TMITGY   G    A+    DM+    E            
Sbjct: 442 EIARSIFGSM-NRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDN 500

Query: 233 ------SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDL 286
                  N  T  ++L  CAA++A   G ++H   +      +V V SAL+DMYAKCG L
Sbjct: 501 KNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCL 560

Query: 287 DSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM-----HARDIKIDDFTYPS 341
           + +R + E   + N ++WN +I+ +   G  +EAL LF++M     + R+I+ ++ TY +
Sbjct: 561 NLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIA 620

Query: 342 VLNCFASNIDLNNAKSV-HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD- 399
           +    + +  ++   ++ +++  K G E        L+D+  + G ++ A+ +   M   
Sbjct: 621 IFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSN 680

Query: 400 -KDVISWTSLITGCAYHGSYE 419
            K V +W+SL+  C  H + E
Sbjct: 681 MKKVDAWSSLLGACKIHQNLE 701



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 7/155 (4%)

Query: 60  EKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFE 119
           ++M  +D    + ++  YA  G L  ++ +F +   +N  TW+ LI  Y  +G   EA +
Sbjct: 537 KQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALK 596

Query: 120 LFWQMQLEG-----YRPSQYTLDNVLRLCSLKGLLQRG-EQFHGYAIKTCFDLNAFVVTG 173
           LF +M  EG      RP++ T   +    S  G++  G   F+    K   +  +     
Sbjct: 597 LFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYAC 656

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHV-AWTTMI 207
           LVD+  +   I EA  L K  P     V AW++++
Sbjct: 657 LVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLL 691



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 11/102 (10%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF---------N 91
           ALVD ++  G ++ +  +FE+MS R+  TWN +I AY   G+  EA KLF         N
Sbjct: 549 ALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNN 608

Query: 92  ETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPS 132
                N  T+ ++    S+ G+  E   LF+ M+ + G  P+
Sbjct: 609 REIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPT 650


>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 585

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 257/585 (43%), Positives = 365/585 (62%), Gaps = 1/585 (0%)

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           MR  G   NQFTF SIL+A AA      G Q+H  I   GF+AN++V +AL+DMYAKC D
Sbjct: 1   MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK-MHARDIKIDDFTYPSVLN 344
           + SA R+ +     N VSWNSMIVGF     +  A+ +FK  +  + +  ++ +  SVL+
Sbjct: 61  MHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLS 120

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
             A+   LN  + VH ++VK G     +V N+L+DMY K    D    +F  + D+DV++
Sbjct: 121 ACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVT 180

Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
           W  L+ G   +  +EEA  YF  MR  GI PD    S++L + A L  L  G  +H   +
Sbjct: 181 WNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQII 240

Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ 524
           K G   ++ +  SL+ +YAKCG + DA +VF+ +   +VI+WTA+I     +G   + ++
Sbjct: 241 KLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIE 300

Query: 525 FYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLL 584
            ++ ML+ G +P ++TFV +L ACSH G  E    +F SM K++ + PGP+HYACM+DLL
Sbjct: 301 LFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLL 360

Query: 585 GRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYV 644
           GR+G L EAK  ++ M  +P  +VW ALL ACR +G+L++G  AA  LFE+EP N   YV
Sbjct: 361 GRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYV 420

Query: 645 QLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYS 704
            L+NM + +G+ E+A  VR+LM   G+RKEPGCSW++  +   +F + DR H    +IY 
Sbjct: 421 LLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYK 480

Query: 705 KIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFK 764
            ++++  L+K+ GYV +  F  +++EE  +E GL YHSEKLA+AFGLLTLP  +PIRI K
Sbjct: 481 MLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRIKK 540

Query: 765 NLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           NLR CG CHT MK  S ++ R II+RD NRFH F  G CSCGDYW
Sbjct: 541 NLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 585



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 142/460 (30%), Positives = 233/460 (50%), Gaps = 18/460 (3%)

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+  G  P+Q+T  ++L   +   ++  G+Q H    K  FD N FV T LVDMYAKC  
Sbjct: 1   MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD-MRVEGVESNQFTFPSIL 242
           +  A  +F   P+ +N V+W +MI G+  N    +A+  F+D +R + V  N+ +  S+L
Sbjct: 61  MHSAVRVFDQMPE-RNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVL 119

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           +ACA +   +FG QVHG ++  G     YV ++L+DMY KC   D   +L +     + V
Sbjct: 120 SACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVV 179

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           +WN +++GF +    +EA + F  M    I  D+ ++ +VL+  AS   L+   ++H  I
Sbjct: 180 TWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQI 239

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           +K G+     +  +LI MYAK G+L  A+ VF  ++D +VISWT++I+    HG   + +
Sbjct: 240 IKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVI 299

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFG----QQVHAVFLKSGGCSSLSVDNSL 478
           + F  M   GI P HV    +LSAC+    +E G      +  +   + G    +    +
Sbjct: 300 ELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYAC---M 356

Query: 479 VLVYAKCGCINDANRVFDSMHTRDVIT-WTALIMGCAQNGK---GKEALQFYDQMLARGT 534
           V +  + G +++A R  +SM  +   + W AL+  C + G    G+EA +   +M     
Sbjct: 357 VDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEM--EPY 414

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
            P    +V L   C+ +G  E A      M  V G++  P
Sbjct: 415 NPG--NYVLLANMCTRSGRLEEANEVRRLMG-VNGVRKEP 451



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 203/443 (45%), Gaps = 33/443 (7%)

Query: 56  GQLFEKMSDRDGFTWNTMIAA-----YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSN 110
           GQ    +  + GF  N  +       YA    +  A ++F++ P +N  +W+S+I G+ +
Sbjct: 29  GQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFH 88

Query: 111 YGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAF 169
             L   A  +F  +  E    P++ ++ +VL  C+  G L  G Q HG  +K       +
Sbjct: 89  NNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTY 148

Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
           V+  L+DMY KC+   E   LF+   D ++ V W  ++ G+ QN    +A   F  MR E
Sbjct: 149 VMNSLMDMYFKCRFFDEGVKLFQCVGD-RDVVTWNVLVMGFVQNDKFEEACNYFWVMRRE 207

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
           G+  ++ +F ++L + A+++A   G  +H  I+  G+  N+ +  +LI MYAKCG L  A
Sbjct: 208 GILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDA 267

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
            ++ E  E  N +SW +MI  +   G   + + LF+ M +  I+    T+  VL+  +  
Sbjct: 268 YQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHT 327

Query: 350 -------IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV 402
                     N+ K +H +    G E Y      ++D+  + G LD A      M  K  
Sbjct: 328 GRVEEGLAHFNSMKKIHDM--NPGPEHYA----CMVDLLGRAGWLDEAKRFIESMPMKPT 381

Query: 403 IS-WTSLITGCAYHGSYE---EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
            S W +L+  C  +G+ +   EA +   +M      P + V+  + + C     LE   +
Sbjct: 382 PSVWGALLGACRKYGNLKMGREAAERLFEMEPYN--PGNYVL--LANMCTRSGRLEEANE 437

Query: 459 VHAVF-----LKSGGCSSLSVDN 476
           V  +       K  GCS + V N
Sbjct: 438 VRRLMGVNGVRKEPGCSWIDVKN 460


>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 270/735 (36%), Positives = 421/735 (57%), Gaps = 2/735 (0%)

Query: 73   MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
            ++  Y N G L + +K+F++      F W+ L+  Y+  G   E+  LF +MQ  G   +
Sbjct: 410  LVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGN 469

Query: 133  QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
             YT   VL+  +  G ++  ++ HGY +K  F  N  VV  L+  Y K   +  A  LF 
Sbjct: 470  CYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFD 529

Query: 193  MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
               +  + V+W +MI G   NG+    +E F  M + GVE +  T  S+L A A +    
Sbjct: 530  ELSE-PDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLS 588

Query: 253  FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
             G  +HG  + + F   V   + L+DMY+KCG+L+ A  +         VSW S I  + 
Sbjct: 589  LGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYV 648

Query: 313  RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
            R+G + +A+ LF +M ++ ++ D +T  S+++  A +  L+  + VHS ++K G      
Sbjct: 649  REGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLP 708

Query: 373  VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
            V NALI+MYAK G+++ A +VF+ +  KD++SW ++I G + +    EAL+ F DM+   
Sbjct: 709  VTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQ-KQ 767

Query: 433  ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
              PD + ++ +L ACA L  L+ G+++H   L+ G  S L V  +LV +YAKCG +  A 
Sbjct: 768  FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQ 827

Query: 493  RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
             +FD +  +D+I+WT +I G   +G G EA+  +++M   G +PD  +F  +L ACSH+G
Sbjct: 828  LLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSG 887

Query: 553  LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
            L      +F SM    G++P  +HYAC++DLL R G L +A   ++ M  +PD T+W  L
Sbjct: 888  LLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVL 947

Query: 613  LSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIR 672
            LS CR+H D++L E+ A ++FELEP N   YV L+N+Y+ A KWE+  ++RK M+ RG +
Sbjct: 948  LSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFK 1007

Query: 673  KEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEE 732
            + PGCSW+E   + +IF++ +  HP    I   + ++ + ++   Y     + L N ++ 
Sbjct: 1008 QNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLRKLTMQMQNEDYFSMFRYVLINEDDM 1067

Query: 733  GKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDS 792
             KE+    HSEK A+AFG+L LP G  +R+ KN RVCGDCH   K++S    R I+LRDS
Sbjct: 1068 EKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNQRVCGDCHEMGKFMSKTTKREIVLRDS 1127

Query: 793  NRFHHFKAGNCSCGD 807
            NRFHHFK G CSC D
Sbjct: 1128 NRFHHFKDGLCSCRD 1142



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 164/517 (31%), Positives = 263/517 (50%), Gaps = 31/517 (5%)

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           +VL+LC+ K  L+ G++ H   I     ++  +   LV MY  C  + +   +F    + 
Sbjct: 374 SVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMND 433

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           K  + W  +++ Y++ G   +++  F+ M+  GV  N +TF  +L   AA+       +V
Sbjct: 434 KVFL-WNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRV 492

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           HG +L  GF +N  V ++LI  Y K G ++SA  L +     + VSWNSMI G    GF 
Sbjct: 493 HGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFS 552

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
              L +F +M    +++D  T  SVL  +A+  +L+  +++H   VK  F      +N L
Sbjct: 553 GNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTL 612

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           +DMY+K GNL+ A  VF  M D  ++SWTS I      G Y +A+  F +M+  G+ PD 
Sbjct: 613 LDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDI 672

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
             V+SI+ ACA  + L+ G+ VH+  +K+G  S+L V N+L+ +YAKCG + +A  VF  
Sbjct: 673 YTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSK 732

Query: 498 MHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAE-- 555
           +  +D+++W  +I G +QN    EAL+ +  M  +  KPD IT   +L AC  AGLA   
Sbjct: 733 IPVKDIVSWNTMIGGYSQNSLPNEALELFLDM-QKQFKPDDITMACVLPAC--AGLAALD 789

Query: 556 ---------NARWYFESMDKVYGIKPGPDHYAC-MIDLLGRSGKLIEAKALLDQMVGEPD 605
                      R YF  +           H AC ++D+  + G L+ A+ L D M+ + D
Sbjct: 790 KGREIHGHILRRGYFSDL-----------HVACALVDMYAKCGLLVLAQLLFD-MIPKKD 837

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
              W  +++   +HG    G  A +   E+      P
Sbjct: 838 LISWTVMIAGYGMHG---FGNEAISTFNEMRIAGIEP 871



 Score =  242 bits (618), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 154/445 (34%), Positives = 230/445 (51%), Gaps = 4/445 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N++IAAY   G +  A  LF+E    +  +W+S+I G    G      E+F QM + G  
Sbjct: 509 NSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVE 568

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
               TL +VL   +  G L  G   HG+ +K CF         L+DMY+KC  +  A  +
Sbjct: 569 VDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEV 628

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F    D    V+WT+ I  Y + G    AI  F +M+ +GV  + +T  SI+ ACA  S+
Sbjct: 629 FVKMGD-TTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSS 687

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            D G  VH  ++ +G  +N+ V +ALI+MYAKCG ++ AR +     + + VSWN+MI G
Sbjct: 688 LDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGG 747

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           +++     EAL LF  M  +  K DD T   VL   A    L+  + +H  I++ G+   
Sbjct: 748 YSQNSLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSD 806

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
             V  AL+DMYAK G L  A ++F+++  KD+ISWT +I G   HG   EA+  F++MRI
Sbjct: 807 LHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRI 866

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAKCGCIN 489
           +GI PD    S IL+AC+   +L  G +         G    L     +V + A+ G ++
Sbjct: 867 AGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLS 926

Query: 490 DANRVFDSMHTR-DVITWTALIMGC 513
            A +  +SM  + D   W  L+ GC
Sbjct: 927 KAYKFIESMPIKPDTTIWGVLLSGC 951



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 122/355 (34%), Positives = 187/355 (52%), Gaps = 4/355 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           NT++  Y+  G L  A ++F +       +W+S I  Y   GL  +A  LF +MQ +G R
Sbjct: 610 NTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVR 669

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  YT+ +++  C+    L +G   H Y IK     N  V   L++MYAKC  + EA  +
Sbjct: 670 PDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLV 729

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P  K+ V+W TMI GYSQN    +A+E F DM+ +  + +  T   +L ACA ++A
Sbjct: 730 FSKIP-VKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAA 787

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            D G ++HG IL  G+ ++++V  AL+DMYAKCG L  A+ L +     + +SW  MI G
Sbjct: 788 LDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAG 847

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA-KSVHSLIVKTGFEG 369
           +   GF  EA+S F +M    I+ D+ ++  +LN  + +  LN   K  +S+  + G E 
Sbjct: 848 YGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEP 907

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGSYEEALK 423
                  ++D+ A+ GNL  A+     M  K D   W  L++GC  H   + A K
Sbjct: 908 KLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEK 962



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 192/377 (50%), Gaps = 2/377 (0%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           ++ S+L  CA   + + G +VH  I+S+G   +  + + L+ MY  CGDL   R++ +  
Sbjct: 371 SYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKI 430

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
             D    WN ++  +A+ G  +E++SLFKKM    +  + +T+  VL CFA+   +   K
Sbjct: 431 MNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECK 490

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            VH  ++K GF     V N+LI  Y K G ++ A  +F+ + + DV+SW S+I GC  +G
Sbjct: 491 RVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNG 550

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
                L+ F  M I G+  D   + S+L A A +  L  G+ +H   +K+     +   N
Sbjct: 551 FSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSN 610

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           +L+ +Y+KCG +N A  VF  M    +++WT+ I    + G   +A+  +D+M ++G +P
Sbjct: 611 TLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRP 670

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           D  T   ++ AC+ +   +  R     + K  G+         +I++  + G + EA+ +
Sbjct: 671 DIYTVTSIVHACACSSSLDKGRDVHSYVIK-NGMGSNLPVTNALINMYAKCGSVEEARLV 729

Query: 597 LDQMVGEPDATVWKALL 613
             + +   D   W  ++
Sbjct: 730 FSK-IPVKDIVSWNTMI 745


>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
          Length = 1091

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 267/744 (35%), Positives = 418/744 (56%), Gaps = 3/744 (0%)

Query: 66   DGFTWNTMIAAYANSGRLREAKKLFNETPFK-NFFTWSSLIYGYSNYGLDIEAFELFWQM 124
            D    + ++  Y   G +  A+++F+    K N   W+ ++ GY+  G   E+  LF QM
Sbjct: 349  DAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQM 408

Query: 125  QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
               G  P ++ +  +L+  +     + G   HGY +K  F     V   L+  YAK   I
Sbjct: 409  HELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMI 468

Query: 185  FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
             +A  +F   P  ++ ++W ++I+G S NG   +AIE F  M  +G E +  T  S+L A
Sbjct: 469  GDAVLVFNRMPR-QDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPA 527

Query: 245  CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
            CA       G  VHG  + +G      + +AL+DMY+ C D  S  ++       N VSW
Sbjct: 528  CAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSW 587

Query: 305  NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
             +MI  + R G   +   L ++M    I+ D F   S L+ FA +  L   KSVH   ++
Sbjct: 588  TAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIR 647

Query: 365  TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
             G E    V NAL++MY K  N++ A ++F+ + +KDVISW +LI G + +    E+   
Sbjct: 648  NGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSL 707

Query: 425  FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
            FSDM +    P+ V ++ IL A A ++ LE G+++HA  L+ G        N+LV +Y K
Sbjct: 708  FSDMLLQ-FRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVK 766

Query: 485  CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
            CG +  A  +FD +  +++I+WT +I G   +G GK A+  ++QM   G +PD  +F  +
Sbjct: 767  CGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAI 826

Query: 545  LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
            L+AC H+GLA   R +F++M K Y I+P   HY C++DLL R+G L EA   ++ M  EP
Sbjct: 827  LYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEP 886

Query: 605  DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
            D+++W +LL  CR+H +++L E+ A+ +F+LEP N   YV L+N+Y+ A +WE   +++ 
Sbjct: 887  DSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLANIYAEAERWEAVKKLKN 946

Query: 665  LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
             +  RG+R+  G SW+E  S+VH+FI+++R HP    I   +D++   +++ G+ P   +
Sbjct: 947  KIGGRGLRENTGYSWIEVRSKVHVFIADNRNHPDWNRIAEFLDDVARRMRQEGHDPKKKY 1006

Query: 725  ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
            AL   ++   +  L  HS KLAVAFG+L LP+G PIR+ KN +VC  CH A K+IS +  
Sbjct: 1007 ALMGADDAVHDEALCGHSSKLAVAFGVLNLPEGRPIRVTKNSKVCSHCHEAAKFISKMCN 1066

Query: 785  RHIILRDSNRFHHFKAGNCSCGDY 808
            R IILRDS+RFH F+ G CSC  Y
Sbjct: 1067 REIILRDSSRFHRFEGGRCSCRGY 1090



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 161/489 (32%), Positives = 241/489 (49%), Gaps = 16/489 (3%)

Query: 73  MIAAYANSGRLREAKKLFNETPFK--NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           ++ AY   G L EA+ +F+  P +  +   W+SL+  Y+  G   EA  LF QMQ  G  
Sbjct: 142 LVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVS 201

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  + +  VL+  S  G L  GE  HG   K        V   L+ +Y++C  + +A  +
Sbjct: 202 PDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARV 261

Query: 191 F-KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           F  M P  ++ ++W +MI G   NG+   A++ F  M  +G E +  T  S+L ACA + 
Sbjct: 262 FDSMHP--RDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLG 319

Query: 250 ARDFGAQVHGCILSSGFEANV-YVQSALID---------MYAKCGDLDSARRLLE-YSEI 298
               G  VHG  + SG    +  VQS + D         MY KCGD+ SARR+ +  S  
Sbjct: 320 YGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSK 379

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
            N   WN ++ G+A+ G  +E+LSLF +MH   I  D+     +L C        +    
Sbjct: 380 GNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVA 439

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           H  IVK GF     V NALI  YAK   +  A +VFN M  +D ISW S+I+GC+ +G  
Sbjct: 440 HGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLN 499

Query: 419 EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSL 478
            EA++ F  M   G   D V + S+L ACA+      G+ VH   +K+G     S+ N+L
Sbjct: 500 SEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANAL 559

Query: 479 VLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDY 538
           + +Y+ C      N++F SM  ++V++WTA+I    + G   +      +M+  G +PD 
Sbjct: 560 LDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDV 619

Query: 539 ITFVGLLFA 547
                 L A
Sbjct: 620 FAVTSALHA 628



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 160/564 (28%), Positives = 271/564 (48%), Gaps = 21/564 (3%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +IA Y+  GR+ +A ++F+    ++  +W+S+I G  + G    A +LF +M  +G  
Sbjct: 243 NALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTE 302

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDL----------NAFVVTGLVDMYAK 180
            S  T+ +VL  C+  G    G+  HGY++K+              +A + + LV MY K
Sbjct: 303 ISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVK 362

Query: 181 CKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
           C  +  A  +F       N   W  ++ GY++ G   +++  F  M   G+  ++     
Sbjct: 363 CGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISC 422

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           +L     +S    G   HG I+  GF A   V +ALI  YAK   +  A  +       +
Sbjct: 423 LLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQD 482

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
            +SWNS+I G +  G + EA+ LF +M  +  ++D  T  SVL   A +      + VH 
Sbjct: 483 TISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHG 542

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
             VKTG  G   + NAL+DMY+   +      +F  M  K+V+SWT++IT     G +++
Sbjct: 543 YSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDK 602

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
                 +M + GI PD   V+S L A A    L+ G+ VH   +++G    L V N+L+ 
Sbjct: 603 VAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALME 662

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           +Y KC  + +A  +FD +  +DVI+W  LI G ++N    E+   +  ML +  +P+ +T
Sbjct: 663 MYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQ-FRPNAVT 721

Query: 541 FVGLLFACSHAGLAENARWYFESMDKVYGIKPG--PDHYA--CMIDLLGRSGKLIEAKAL 596
              +L A +     E  R         Y ++ G   D YA   ++D+  + G L+ A+ L
Sbjct: 722 MTCILPAAASISSLERGREI-----HAYALRRGFLEDSYASNALVDMYVKCGALLVARVL 776

Query: 597 LDQMVGEPDATVWKALLSACRVHG 620
            D++  + +   W  +++   +HG
Sbjct: 777 FDRLT-KKNLISWTIMIAGYGMHG 799



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 159/574 (27%), Positives = 259/574 (45%), Gaps = 59/574 (10%)

Query: 174 LVDMYAKCKCIFEAEYLFK-MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
           LV  Y KC  + EA  +F  M P   +   WT++++ Y++ G   +A+  FR M+  GV 
Sbjct: 142 LVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVS 201

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
            +      +L   +++ +   G  +HG +   G      V +ALI +Y++CG ++ A R+
Sbjct: 202 PDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARV 261

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
            +     + +SWNSMI G    G+H  A+ LF KM ++  +I   T  SVL   A     
Sbjct: 262 FDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYG 321

Query: 353 NNAKSVHSLIVKTGFE-GYKFVNNALID---------MYAKQGNLDCAFMVFNLMQDK-D 401
              K+VH   VK+G   G   V + + D         MY K G++  A  VF+ M  K +
Sbjct: 322 LIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGN 381

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
           V  W  ++ G A  G +EE+L  F  M   GI PD   +S +L     L+    G   H 
Sbjct: 382 VHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHG 441

Query: 462 VFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKE 521
             +K G  +  +V N+L+  YAK   I DA  VF+ M  +D I+W ++I GC+ NG   E
Sbjct: 442 YIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSE 501

Query: 522 ALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMI 581
           A++ + +M  +G + D +T + +L AC     A++  W+   +   Y +K G        
Sbjct: 502 AIELFIRMWTQGQELDSVTLLSVLPAC-----AQSRYWFAGRVVHGYSVKTG-------- 548

Query: 582 DLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFE-LEPMNA 640
            L+G +     A ALLD      D   W+                 + N +F  +   N 
Sbjct: 549 -LIGETSL---ANALLDMYSNCSD---WQ-----------------STNQIFRSMGQKNV 584

Query: 641 MPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISED---RGHP 697
           + +  +   Y  AG ++  A + + M   GIR +         S +H F  ++   +G  
Sbjct: 585 VSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDV----FAVTSALHAFAGDESLKQGKS 640

Query: 698 LRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEE 731
           +    Y+  + +  L+  A  + +M     NVEE
Sbjct: 641 VHG--YTIRNGMEKLLPVANALMEMYVKCRNVEE 672



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 155/314 (49%), Gaps = 17/314 (5%)

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI-----VKTGFEGYKFVNNALIDM 380
           ++   D  +D  +Y  V+        L  AK  H+LI       TG +G   +   L+  
Sbjct: 87  RLLGSDGGVDVRSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKG-SVLGKRLVLA 145

Query: 381 YAKQGNLDCAFMVFNLM--QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
           Y K G+L  A  VF+ M  Q  DV  WTSL++  A  G ++EA+  F  M+  G+ PD  
Sbjct: 146 YLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAH 205

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
            VS +L   + L  L  G+ +H +  K G   + +V N+L+ VY++CG + DA RVFDSM
Sbjct: 206 AVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSM 265

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG---LAE 555
           H RD I+W ++I GC  NG    A+  + +M ++GT+   +T + +L AC+  G   + +
Sbjct: 266 HPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGK 325

Query: 556 NARWYFESMDKVYG---IKPGPDHYAC---MIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
               Y      ++G   ++ G D  A    ++ +  + G +  A+ + D M  + +  VW
Sbjct: 326 AVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVW 385

Query: 610 KALLSACRVHGDLE 623
             ++      G+ E
Sbjct: 386 NLIMGGYAKVGEFE 399


>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
 gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
          Length = 653

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 266/653 (40%), Positives = 400/653 (61%), Gaps = 9/653 (1%)

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLF-KMFPDGKNHVAWTTMITGYSQNGYGFKAIEC 222
           F  +  +   L+ MY KC  +  A  +F +M    +N V+WT ++ G+ QNG   +++  
Sbjct: 3   FGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLK--RNVVSWTALMCGHIQNGNPLESLLL 60

Query: 223 FRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK 282
           F  M + GV+ N FTF + L AC  ++  D G Q+H   + +GF+    V +++IDMY+K
Sbjct: 61  FSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSK 120

Query: 283 CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
           CG ++ A  + E   + N +SWN+MI G+   GF ++AL LF+KM      +D+FT+ S 
Sbjct: 121 CGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTST 180

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGF--EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
           L   +    +     +H+ ++  GF       V  ALID+Y K G L  A  VF+ +++K
Sbjct: 181 LKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEK 240

Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
            VISWT+LI G A  G+  E+++ F  +R S I  D  ++SS++   A+  +++ G+Q+H
Sbjct: 241 HVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMH 300

Query: 461 AVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGK 520
           A  +K      +SV NS++ +Y KCG IN+A R+F  M  R+VI+WT +I G  ++G GK
Sbjct: 301 AFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGK 360

Query: 521 EALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACM 580
           EA++ +D+M    T+PD +T++ +L  CSH+GL E  + YF  +   +GIK   +HYACM
Sbjct: 361 EAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACM 420

Query: 581 IDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNA 640
           +DLLGR+G+L EAK L+D M  E +  +W+ LLSACRVHGDLELG+     L  L+  N 
Sbjct: 421 VDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENP 480

Query: 641 MPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRT 700
           + YV +SN+Y+ AG W++  R+R+L+KS+ ++KE G SWVE + +VH F   D  HPL  
Sbjct: 481 VNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTE 540

Query: 701 DIYSKIDEIMLLIKEA-GYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLT--LPQG 757
            I+  + E+   +KE  GYV  + +ALH+VEEE K   L  HSEKLA+   L+   L +G
Sbjct: 541 KIHEILKEMERRMKEELGYVYGVKYALHDVEEESKMDNLRVHSEKLAIGLALVCGGLEEG 600

Query: 758 AP-IRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
              IR+FKNLRVCGDCH  +K +S +     ++RD+NRFH F+ G CSC DYW
Sbjct: 601 RKVIRVFKNLRVCGDCHEFIKGLSKILRVVFVVRDANRFHRFEDGLCSCRDYW 653



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 149/460 (32%), Positives = 248/460 (53%), Gaps = 10/460 (2%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +I  Y   GRL  A  +F+    +N  +W++L+ G+   G  +E+  LF +M L G +
Sbjct: 11  NDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGLSGVK 70

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+ +T    L+ C L   L  G Q H   +KT FD+   V   ++DMY+KC  I EA  +
Sbjct: 71  PNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACM 130

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F++ P  +N ++W  MI GY+  G+  KA+  F+ M+  G   ++FTF S L AC+ + A
Sbjct: 131 FEVMPV-RNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGA 189

Query: 251 RDFGAQVHGCILSSGF--EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
              G Q+H  +++ GF    N  V  ALID+Y KCG L  ARR+  + E  + +SW ++I
Sbjct: 190 IKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALI 249

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
           +G+A++G   E++ LF+++    I++D F   S++  FA    +   K +H+  +K    
Sbjct: 250 LGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSG 309

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
               V N+++DMY K G ++ A  +F+ M  ++VISWT +ITG   HG  +EA++ F +M
Sbjct: 310 VDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEM 369

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLVLVYAKCG 486
           ++    PD V   ++L  C+   ++E GQ+  +      G  +  V++   +V +  + G
Sbjct: 370 QLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKA-RVEHYACMVDLLGRAG 428

Query: 487 CINDANRVFDSMHTR-DVITWTALIMGCAQNGK---GKEA 522
            + +A  + DSM    +V  W  L+  C  +G    GKE 
Sbjct: 429 RLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEV 468



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 193/383 (50%), Gaps = 13/383 (3%)

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLF 324
           GF  ++ + + LI MY KCG L  A  + +     N VSW +++ G  + G   E+L LF
Sbjct: 2   GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61

Query: 325 KKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
            KM    +K +DFT+ + L        L+  + +H + VKTGF+    V N++IDMY+K 
Sbjct: 62  SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121

Query: 385 GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
           G ++ A  +F +M  +++ISW ++I G    G  E+AL  F  M+  G   D    +S L
Sbjct: 122 GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTL 181

Query: 445 SACAELTVLEFGQQVHAVFLKSGG---CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR 501
            AC++L  ++ G Q+HA FL +GG     + +V  +L+ +Y KCG +  A RVF  +  +
Sbjct: 182 KACSDLGAIKEGNQIHA-FLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEK 240

Query: 502 DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYF 561
            VI+WTALI+G AQ G   E+++ + Q+     + D      ++   +   L +  +   
Sbjct: 241 HVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMH 300

Query: 562 ESMDKVYGIKPGPDHYAC--MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVH 619
               KV     G D   C  ++D+  + G + EA+ L  +M    +   W  +++    H
Sbjct: 301 AFAIKV---PSGVDISVCNSILDMYLKCGMINEAERLFSEMPAR-NVISWTVMITGYGKH 356

Query: 620 GDLELGERAANNLFELEPMNAMP 642
           G   LG+ A     E++  +  P
Sbjct: 357 G---LGKEAIRLFDEMQLDSTEP 376



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 187/406 (46%), Gaps = 43/406 (10%)

Query: 23  ARYTHNVGNSVKPASDL----NRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAY 77
            R  H++   VK   D+      +++D +S  G I+EA  +FE M  R+  +WN MIA Y
Sbjct: 92  GRQIHDI--CVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNLISWNAMIAGY 149

Query: 78  ANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLD 137
             +G        F E                       +A  LF +MQ  G    ++T  
Sbjct: 150 TVAG--------FCE-----------------------KALVLFQKMQEVGGFLDEFTFT 178

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCF--DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
           + L+ CS  G ++ G Q H + I   F   +N  V   L+D+Y KC  +F A  +F    
Sbjct: 179 STLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIE 238

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGA 255
           + K+ ++WT +I GY+Q G   +++E FR +R   ++ + F   S++   A  +    G 
Sbjct: 239 E-KHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGK 297

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           Q+H   +      ++ V ++++DMY KCG ++ A RL       N +SW  MI G+ + G
Sbjct: 298 QMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHG 357

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSV-LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
             KEA+ LF +M     + DD TY +V L C  S +     +    L    G +      
Sbjct: 358 LGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHY 417

Query: 375 NALIDMYAKQGNL-DCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
             ++D+  + G L +   +V ++  + +V  W +L++ C  HG  E
Sbjct: 418 ACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLE 463



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 79/204 (38%), Gaps = 43/204 (21%)

Query: 19  IIGPARYTHNVGNSVKPASDL---NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIA 75
           ++   +  H     V    D+   N  L  +   G I+EA +LF +M  R+  +W  MI 
Sbjct: 292 LVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMIT 351

Query: 76  AYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYT 135
            Y   G  +EA +LF+E                               MQL+   P   T
Sbjct: 352 GYGKHGLGKEAIRLFDE-------------------------------MQLDSTEPDDVT 380

Query: 136 LDNVLRLCSLKGLLQRGEQFHG-----YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
              VL  CS  GL+++G+++       + IK   +  A     +VD+  +   + EA+ L
Sbjct: 381 YLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYAC----MVDLLGRAGRLKEAKNL 436

Query: 191 FKMFPDGKNHVAWTTMITGYSQNG 214
               P   N   W T+++    +G
Sbjct: 437 VDSMPLEANVGIWQTLLSACRVHG 460


>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
          Length = 1027

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 277/782 (35%), Positives = 436/782 (55%), Gaps = 16/782 (2%)

Query: 43   LVDFSNSGEIDEA--------------GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKK 88
            +V +S+ GE +E               GQ+ +   +      N++I+   + G +  A  
Sbjct: 247  MVGYSDKGEPEEVIDIYKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANY 306

Query: 89   LFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL 148
            +F++   ++  +W+S+   Y+  G   E+F +F  M+      +  T+  +L +      
Sbjct: 307  IFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDH 366

Query: 149  LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
             + G   HG  +K  FD    V   L+ MYA      EA  +FK  P  K+ ++W +++ 
Sbjct: 367  QKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT-KDLISWNSLMA 425

Query: 209  GYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEA 268
             +  +G    A+     M   G   N  TF S L AC      + G  +HG ++ SG   
Sbjct: 426  SFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFY 485

Query: 269  NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH 328
            N  + +AL+ MY K G++  +RR+L      + V+WN++I G+A      +AL+ F+ M 
Sbjct: 486  NQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR 545

Query: 329  ARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL 387
               +  +  T  SVL+ C      L   K +H+ IV  GFE  + V N+LI MYAK G+L
Sbjct: 546  VEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDL 605

Query: 388  DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSAC 447
              +  +FN + ++++I+W +++   A+HG  EE LK  S MR  G+  D    S  LSA 
Sbjct: 606  SSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAA 665

Query: 448  AELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWT 507
            A+L VLE GQQ+H + +K G      + N+   +Y+KCG I +  ++      R + +W 
Sbjct: 666  AKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWN 725

Query: 508  ALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKV 567
             LI    ++G  +E    + +ML  G KP ++TFV LL ACSH GL +    Y++ + + 
Sbjct: 726  ILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARD 785

Query: 568  YGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGER 627
            +G++P  +H  C+IDLLGRSG+L EA+  + +M  +P+  VW++LL++C++HG+L+ G +
Sbjct: 786  FGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRK 845

Query: 628  AANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVH 687
            AA NL +LEP +   YV  SNM++T G+WED   VRK M  + I+K+  CSWV+   +V 
Sbjct: 846  AAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVS 905

Query: 688  IFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAV 747
             F   DR HP   +IY+K+++I  LIKE+GYV D + AL + +EE KE  L  HSE+LA+
Sbjct: 906  SFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLAL 965

Query: 748  AFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGD 807
            A+ L++ P+G+ +RIFKNLR+C DCH+  K++S V  R I+LRD  RFHHF+ G CSC D
Sbjct: 966  AYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKD 1025

Query: 808  YW 809
            YW
Sbjct: 1026 YW 1027



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 153/555 (27%), Positives = 265/555 (47%), Gaps = 30/555 (5%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           NT+I  Y   GR++ A+ LF+  P +N  +W++++ G    GL +E  E F +M   G +
Sbjct: 111 NTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIK 170

Query: 131 PSQYTLDNVLRLCSLKG-LLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           PS + + +++  C   G + + G Q HG+  K+    + +V T ++ +Y     +  +  
Sbjct: 171 PSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRK 230

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +F+  PD +N V+WT+++ GYS  G   + I+ ++D                        
Sbjct: 231 VFEEMPD-RNVVSWTSLMVGYSDKGEPEEVIDIYKD------------------------ 265

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
               G Q+ G ++ SG E+ + V+++LI M    G++D A  + +     + +SWNS+  
Sbjct: 266 -ESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAA 324

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
            +A+ G  +E+  +F  M     +++  T  ++L+           + +H L+VK GF+ 
Sbjct: 325 AYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS 384

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
              V N L+ MYA  G    A +VF  M  KD+ISW SL+      G   +AL     M 
Sbjct: 385 VVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI 444

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
            SG   ++V  +S L+AC      E G+ +H + + SG   +  + N+LV +Y K G ++
Sbjct: 445 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMS 504

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
           ++ RV   M  RDV+ W ALI G A++    +AL  +  M   G   +YIT V +L AC 
Sbjct: 505 ESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL 564

Query: 550 HAG-LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
             G L E  +     +    G +        +I +  + G L  ++ L + +    +   
Sbjct: 565 LPGDLLERGKPLHAYIVSA-GFESDEHVKNSLITMYAKCGDLSSSQDLFNGL-DNRNIIT 622

Query: 609 WKALLSACRVHGDLE 623
           W A+L+A   HG  E
Sbjct: 623 WNAMLAANAHHGHGE 637



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 150/566 (26%), Positives = 266/566 (46%), Gaps = 43/566 (7%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +    ++  Y   G +  ++K+F E P +N  +W+SL+ GYS+ G   E  +++    
Sbjct: 208 DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKDES 267

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           L                         G Q  G  +K+  +    V   L+ M      + 
Sbjct: 268 L-------------------------GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVD 302

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A Y+F    + ++ ++W ++   Y+QNG+  ++   F  MR    E N  T  ++L+  
Sbjct: 303 YANYIFDQMSE-RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVL 361

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
             V  + +G  +HG ++  GF++ V V + L+ MYA  G    A  + +     + +SWN
Sbjct: 362 GHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWN 421

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVK 364
           S++  F   G   +AL L   M +    ++  T+ S L  CF  +      + +H L+V 
Sbjct: 422 SLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF-FEKGRILHGLVVV 480

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
           +G    + + NAL+ MY K G +  +  V   M  +DV++W +LI G A     ++AL  
Sbjct: 481 SGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAA 540

Query: 425 FSDMRISGICPDHVVVSSILSAC-AELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
           F  MR+ G+  +++ V S+LSAC     +LE G+ +HA  + +G  S   V NSL+ +YA
Sbjct: 541 FQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYA 600

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG ++ +  +F+ +  R++ITW A++   A +G G+E L+   +M + G   D  +F  
Sbjct: 601 KCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSE 660

Query: 544 LLFACSHAGLAENARWYFESMDKVYG--IKPGPDH----YACMIDLLGRSGKLIEAKALL 597
            L A +   + E  +       +++G  +K G +H    +    D+  + G++ E   +L
Sbjct: 661 GLSAAAKLAVLEEGQ-------QLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKML 713

Query: 598 DQMVGEPDATVWKALLSACRVHGDLE 623
              V     + W  L+SA   HG  E
Sbjct: 714 PPSVNRSLPS-WNILISALGRHGYFE 738



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 150/544 (27%), Positives = 254/544 (46%), Gaps = 51/544 (9%)

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFEL------FWQMQLEGYRP-- 131
           +G+L     +F+   F +F  W  L        LDI  FE        W  ++  +    
Sbjct: 23  AGQLATQSPVFSGRRF-SFAQWICLPPVQDATNLDIAMFEKSGRKKNHWNPEISCFDQIG 81

Query: 132 -SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            SQ T++              G   H   +K    L+      L++MY K   +  A +L
Sbjct: 82  FSQITIETT------------GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHL 129

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA-AVS 249
           F + P  +N V+W TM++G  + G   + +E FR M   G++ + F   S++TAC  + S
Sbjct: 130 FDIMPV-RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGS 188

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
               G QVHG +  SG  ++VYV +A++ +Y   G +  +R++ E     N VSW S++V
Sbjct: 189 MFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMV 248

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           G++ +G  +E + ++K                         D +  + +   +VK+G E 
Sbjct: 249 GYSDKGEPEEVIDIYK-------------------------DESLGRQIIGQVVKSGLES 283

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
              V N+LI M    GN+D A  +F+ M ++D ISW S+    A +G  EE+ + FS MR
Sbjct: 284 KLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR 343

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
                 +   VS++LS    +   ++G+ +H + +K G  S + V N+L+ +YA  G   
Sbjct: 344 RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 403

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
           +AN VF  M T+D+I+W +L+     +G+  +AL     M++ G   +Y+TF   L AC 
Sbjct: 404 EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACF 463

Query: 550 HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
                E  R     +  V G+         ++ + G+ G++ E++ +L QM    D   W
Sbjct: 464 TPDFFEKGR-ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQM-PRRDVVAW 521

Query: 610 KALL 613
            AL+
Sbjct: 522 NALI 525



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 174/377 (46%), Gaps = 40/377 (10%)

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           + ++    G  VH   +      +V   + LI+MY K G +  AR L +   + NEVSWN
Sbjct: 83  SQITIETTGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWN 142

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVK 364
           +M+ G  R G + E +  F+KM    IK   F   S++  C  S         VH  + K
Sbjct: 143 TMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAK 202

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
           +G     +V+ A++ +Y   G + C+  VF  M D++V+SWTSL+ G +  G  EE +  
Sbjct: 203 SGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDI 262

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           + D  +                         G+Q+    +KSG  S L+V+NSL+ +   
Sbjct: 263 YKDESL-------------------------GRQIIGQVVKSGLESKLAVENSLISMLGS 297

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
            G ++ AN +FD M  RD I+W ++    AQNG  +E+ + +  M     + +  T   L
Sbjct: 298 MGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTL 357

Query: 545 LFACSHAGLAENARWYFESMDKVYG--IKPGPDHYACMIDLLGR----SGKLIEAKALLD 598
           L    H    ++ +W       ++G  +K G D   C+ + L R    +G+ +EA  +  
Sbjct: 358 LSVLGH---VDHQKWG----RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFK 410

Query: 599 QMVGEPDATVWKALLSA 615
           QM  + D   W +L+++
Sbjct: 411 QMPTK-DLISWNSLMAS 426



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 116/273 (42%), Gaps = 38/273 (13%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  ++  G++  +  LF  + +R+  TWN M+AA A+ G   E  KL +        
Sbjct: 593 NSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVS-------- 644

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
                                  +M+  G    Q++    L   +   +L+ G+Q HG A
Sbjct: 645 -----------------------KMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLA 681

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHV--AWTTMITGYSQNGYGF 217
           +K  F+ ++F+     DMY+KC  I E   + KM P   N    +W  +I+   ++GY  
Sbjct: 682 VKLGFEHDSFIFNAAADMYSKCGEIGE---VVKMLPPSVNRSLPSWNILISALGRHGYFE 738

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSAL 276
           +    F +M   G++    TF S+LTAC+     D G   +  I    G E  +     +
Sbjct: 739 EVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICV 798

Query: 277 IDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
           ID+  + G L  A   +    +  N++ W S++
Sbjct: 799 IDLLGRSGRLAEAETFISKMPMKPNDLVWRSLL 831


>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  509 bits (1312), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 280/740 (37%), Positives = 419/740 (56%), Gaps = 10/740 (1%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAF----ELFWQMQLEG 128
           +I  Y   G +  ++  F+    KN F+W+S+I  Y  +G   EA     +LF       
Sbjct: 60  LINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGH 119

Query: 129 YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
            RP  YT   +L+ C     L  G++ H    K  F+ + FV   LV +Y++   +  A 
Sbjct: 120 LRPDFYTFPPILKACVS---LVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAH 176

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
            +F   P  K+  +W  MI+G+ QNG    A+     M+ EGV+ +  T  SIL  CA  
Sbjct: 177 KVFVDMP-VKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQS 235

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
                G  +H  +L  G +++V+V +ALI+MY+K G L  A+ + +  E+ + VSWNS+I
Sbjct: 236 DDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSII 295

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG-F 367
             + +      AL  FK M    I+ D  T  S+ + F+   D   ++S+   +++    
Sbjct: 296 AAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWL 355

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
           +    + NAL++MYAK G ++CA  VF+ +  KD ISW +L+TG   +G   EA+  ++ 
Sbjct: 356 DKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNM 415

Query: 428 MR-ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
           M       P+     SI+ A + +  L+ G ++HA  +K+     + V   L+ +Y KCG
Sbjct: 416 MEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCG 475

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
            + DA  +F  +     + W A+I     +G+G+EALQ +  MLA   K D+ITFV LL 
Sbjct: 476 RLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLS 535

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ACSH+GL +  +  F+ M K YGIKP   HY CM+DLLGR+G L +A  L+  M  +PDA
Sbjct: 536 ACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDA 595

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
           ++W ALLSAC+++G+ ELG  A++ L E++  N   YV LSN+Y+   KWE   +VR L 
Sbjct: 596 SIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLA 655

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFAL 726
           + RG+RK PG S V   S+  +F + ++ HP  T+IY ++  +   +K  GYVPD +F  
Sbjct: 656 RDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVY 715

Query: 727 HNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRH 786
            ++EE+ KE  L  HSE+LA+AFG+++ P  +PIRIFKNLRVCGDCH A KYIS +  R 
Sbjct: 716 QDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISRISERE 775

Query: 787 IILRDSNRFHHFKAGNCSCG 806
           I++RDSNRFHHFK G CSC 
Sbjct: 776 IVVRDSNRFHHFKDGICSCA 795



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 231/477 (48%), Gaps = 5/477 (1%)

Query: 58  LFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEA 117
           +F+   + D F   +++  Y+  G L  A K+F + P K+  +W+++I G+   G    A
Sbjct: 147 VFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGA 206

Query: 118 FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
             +  +M+ EG +    T+ ++L +C+    +  G   H + +K   D + FV   L++M
Sbjct: 207 LGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINM 266

Query: 178 YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
           Y+K   + +A+ +F    + ++ V+W ++I  Y QN     A+  F+ M++ G+  +  T
Sbjct: 267 YSKFGRLQDAQMVFDQM-EVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLT 325

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSG-FEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
             S+ +  + +S +     + G ++     + +V + +AL++MYAK G ++ A  + +  
Sbjct: 326 VVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQL 385

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKM-HARDIKIDDFTYPSVLNCFASNIDLNNA 355
              + +SWN+++ G+ + G   EA+  +  M   RD   +  T+ S++  ++    L   
Sbjct: 386 PRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQG 445

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
             +H+ ++K       FV   LID+Y K G L+ A  +F  +     + W ++I     H
Sbjct: 446 MKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIH 505

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC-SSLSV 474
           G  EEAL+ F DM    +  DH+   S+LSAC+   +++ GQ+   +  K  G   SL  
Sbjct: 506 GRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKH 565

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQML 530
              +V +  + G +  A  +  +M  + D   W AL+  C   G  +      D++L
Sbjct: 566 YGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLL 622



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 133/450 (29%), Positives = 218/450 (48%), Gaps = 38/450 (8%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           F ++  +C  V+A     ++H  +L  G   N+ + + LI++Y   GD+  +R   +Y  
Sbjct: 25  FNALFNSCVNVNATK---KLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIH 81

Query: 298 IDNEVSWNSMIVGFARQGFHKEALS----LFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
             N  SWNS+I  + R G + EA++    LF       ++ D +T+P +L    S +D  
Sbjct: 82  KKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD-- 139

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
             K VH  + K GFE   FV  +L+ +Y++ G LD A  VF  M  KDV SW ++I+G  
Sbjct: 140 -GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFC 198

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
            +G+   AL   + M+  G+  D + V+SIL  CA+   +  G  +H   LK G  S + 
Sbjct: 199 QNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVF 258

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
           V N+L+ +Y+K G + DA  VFD M  RD+++W ++I    QN     AL+F+  M   G
Sbjct: 259 VSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGG 318

Query: 534 TKPDYITFVGL--LFA------CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
            +PD +T V L  +F+       S + L    R  +   D V G          ++++  
Sbjct: 319 IRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIG--------NALVNMYA 370

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA--ANNLFELEPMNAMP- 642
           + G +  A  + DQ+    D   W  L++    +G   L   A  A N+ E E  + +P 
Sbjct: 371 KLGYMNCAHTVFDQL-PRKDTISWNTLVTGYTQNG---LASEAIDAYNMME-ECRDTIPN 425

Query: 643 ---YVQLSNMYSTAGKWEDAARVR-KLMKS 668
              +V +   YS  G  +   ++  KL+K+
Sbjct: 426 QGTWVSIIPAYSHVGALQQGMKIHAKLIKN 455



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 107/451 (23%), Positives = 179/451 (39%), Gaps = 105/451 (23%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN-----E 92
           +  ALV+ ++  G ++ A  +F+++  +D  +WNT++  Y  +G   EA   +N      
Sbjct: 361 IGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECR 420

Query: 93  TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
               N  TW S+I  YS+                                    G LQ+G
Sbjct: 421 DTIPNQGTWVSIIPAYSHV-----------------------------------GALQQG 445

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
            + H   IK    L+ FV T L+D+Y KC  + +A  LF   P   + V W  +I     
Sbjct: 446 MKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTS-VPWNAIIASLGI 504

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYV 272
           +G G +A++ F+DM  E V+++  TF S+L+AC+                          
Sbjct: 505 HGRGEEALQLFKDMLAERVKADHITFVSLLSACS-------------------------- 538

Query: 273 QSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI 332
            S L+D   KC D+       EY    +   +  M+    R G+ ++A  L + M    I
Sbjct: 539 HSGLVDEGQKCFDIMQK----EYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNM---PI 591

Query: 333 KIDDFTYPSVLNC--FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
           + D   + ++L+      N +L    S   L V +   GY  +   L ++YA     +  
Sbjct: 592 QPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVL---LSNIYANTEKWEGV 648

Query: 391 FMVFNLMQDKDV---ISWTSLI---------TGCAYHGSYEEALKYF----SDMRISGIC 434
             V +L +D+ +     W+S++         TG   H  Y E  K      + M+  G  
Sbjct: 649 IKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYV 708

Query: 435 PDHVVV---------SSILSACAELTVLEFG 456
           PD+  V           IL++ +E   + FG
Sbjct: 709 PDYSFVYQDIEEDEKEQILNSHSERLAIAFG 739


>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  509 bits (1312), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 282/737 (38%), Positives = 425/737 (57%), Gaps = 3/737 (0%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +I+ +   G   EA ++F     K    +  ++ GY+      +A   F +M  +  R  
Sbjct: 85  VISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLV 144

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
                 +L+LC     L++G + HG  I   F+ N FV+T ++ +YAKC+ I  A  +F+
Sbjct: 145 VGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFE 204

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
                K+ V+WTT++ GY+QNG+  +A++    M+  G + +  T  SIL A A + A  
Sbjct: 205 RMQH-KDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALR 263

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G  +HG    SGFE+ V V +AL+DMY KCG    AR + +       VSWN+MI G A
Sbjct: 264 IGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCA 323

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
           + G  +EA + F KM          T   VL   A+  DL     VH L+ K   +    
Sbjct: 324 QNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVS 383

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           V N+LI MY+K   +D A  +FN ++  +V +W ++I G A +G  +EAL  F  M+  G
Sbjct: 384 VMNSLISMYSKCKRVDIAASIFNNLEKTNV-TWNAMILGYAQNGCVKEALNLFCMMQSQG 442

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
           I  D   +  +++A A+ +V    + +H + +++   +++ V  +LV +YAKCG I  A 
Sbjct: 443 IKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTAR 502

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
           ++FD M  R VITW A+I G   +G GKE L  +++M     KP+ ITF+ ++ ACSH+G
Sbjct: 503 KLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSG 562

Query: 553 LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
             E     F+SM + Y ++P  DHY+ M+DLLGR+G+L +A   + +M  +P  +V  A+
Sbjct: 563 FVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAM 622

Query: 613 LSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIR 672
           L AC++H ++ELGE+AA  LF+L+P     +V L+N+Y++   W+  A+VR  M+ +G+ 
Sbjct: 623 LGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLH 682

Query: 673 KEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEE 732
           K PGCSWVE  +++H F S    HP    IY+ ++ +   IK AGYVPD + ++H+VEE+
Sbjct: 683 KTPGCSWVELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIKAAGYVPDPD-SIHDVEED 741

Query: 733 GKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDS 792
            K+  L+ HSE+LA+AFGLL    G  + I KNLRVCGDCH   KYIS V  R II+RD 
Sbjct: 742 VKKQLLSSHSERLAIAFGLLNTSPGTTLHIRKNLRVCGDCHDTTKYISLVTGREIIVRDL 801

Query: 793 NRFHHFKAGNCSCGDYW 809
            RFHHFK G+CSCGDYW
Sbjct: 802 RRFHHFKNGSCSCGDYW 818



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/389 (34%), Positives = 207/389 (53%), Gaps = 2/389 (0%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F    +++ YA   ++  A K+F     K+  +W++L+ GY+  G    A +L  QMQ  
Sbjct: 181 FVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEA 240

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G +P   TL ++L   +    L+ G   HGYA ++ F+    V   L+DMY KC     A
Sbjct: 241 GQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIA 300

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +FK     K  V+W TMI G +QNG   +A   F  M  EG    + T   +L ACA 
Sbjct: 301 RLVFKGM-RSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACAN 359

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           +   + G  VH  +     ++NV V ++LI MY+KC  +D A  +    E  N V+WN+M
Sbjct: 360 LGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTN-VTWNAM 418

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I+G+A+ G  KEAL+LF  M ++ IK+D FT   V+   A       AK +H L V+   
Sbjct: 419 ILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACM 478

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
           +   FV+ AL+DMYAK G +  A  +F++MQ++ VI+W ++I G   HG  +E L  F++
Sbjct: 479 DNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNE 538

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFG 456
           M+   + P+ +   S++SAC+    +E G
Sbjct: 539 MQKGAVKPNDITFLSVISACSHSGFVEEG 567



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 182/329 (55%), Gaps = 1/329 (0%)

Query: 239 PSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI 298
           PS++      S ++   Q+   I+ +GF      Q+ +I ++ K G    A R+ E+ E+
Sbjct: 49  PSVVLLENCTSKKEL-YQILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVEL 107

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
             +V ++ M+ G+A+     +AL  F +M   ++++    Y  +L     N+DL   + +
Sbjct: 108 KLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREI 167

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           H LI+  GFE   FV  A++ +YAK   +D A+ +F  MQ KD++SWT+L+ G A +G  
Sbjct: 168 HGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHA 227

Query: 419 EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSL 478
           + AL+    M+ +G  PD V + SIL A A++  L  G+ +H    +SG  S ++V N+L
Sbjct: 228 KRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNAL 287

Query: 479 VLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDY 538
           + +Y KCG    A  VF  M ++ V++W  +I GCAQNG+ +EA   + +ML  G  P  
Sbjct: 288 LDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTR 347

Query: 539 ITFVGLLFACSHAGLAENARWYFESMDKV 567
           +T +G+L AC++ G  E   +  + +DK+
Sbjct: 348 VTMMGVLLACANLGDLERGWFVHKLLDKL 376



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 222/487 (45%), Gaps = 74/487 (15%)

Query: 38  DLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK 96
           ++  AL+D +   G    A  +F+ M  +   +WNTMI   A +G               
Sbjct: 282 NVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESE------------ 329

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
                              EAF  F +M  EG  P++ T+  VL  C+  G L+RG   H
Sbjct: 330 -------------------EAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVH 370

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
               K   D N  V+  L+ MY+KCK +  A  +F      K +V W  MI GY+QNG  
Sbjct: 371 KLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLE--KTNVTWNAMILGYAQNGCV 428

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
            +A+  F  M+ +G++ + FT   ++TA A  S       +HG  + +  + NV+V +AL
Sbjct: 429 KEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTAL 488

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           +DMYAKCG + +AR+L +  +  + ++WN+MI G+   G  KE L LF +M    +K +D
Sbjct: 489 VDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPND 548

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN------------NALIDMYAKQ 384
            T+ SV++  +           HS  V+ G   +K +             +A++D+  + 
Sbjct: 549 ITFLSVISACS-----------HSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRA 597

Query: 385 GNLDCAFMVFNLMQDKDVISWTSLITG-CAYHGSYEEALKYFSDMRISGICPD----HVV 439
           G LD A+     M  K  IS    + G C  H + E   K  +  ++  + PD    HV+
Sbjct: 598 GQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEK--AAQKLFKLDPDEGGYHVL 655

Query: 440 VSSILSA------CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
           +++I ++       A++      + +H    K+ GCS + + N +   Y+      ++ +
Sbjct: 656 LANIYASNSMWDKVAKVRTAMEDKGLH----KTPGCSWVELRNEIHTFYSGSTNHPESKK 711

Query: 494 VFDSMHT 500
           ++  + T
Sbjct: 712 IYAFLET 718


>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 286/780 (36%), Positives = 416/780 (53%), Gaps = 110/780 (14%)

Query: 140 LRLCSLK--GLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           L+LCS +           H + I + F      +  L++MY K   +  A  LF+  P+ 
Sbjct: 18  LQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNP 77

Query: 198 --------------------------------KNHVAWTTMITGYSQNGYGFKAIECFRD 225
                                           ++ V +  MITGY+ NG G  A+E FR 
Sbjct: 78  DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137

Query: 226 MRVEGVESNQFTFPSILTACAA-VSARDFGAQVH--------GCILSSGFEA--NVYVQS 274
           MR +    + FTF S+L+A    V       Q+H        GC+ SS   A  +VYV+ 
Sbjct: 138 MRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKR 197

Query: 275 A------------------------------LIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           A                              +I  Y +  DL+ AR + E    +   +W
Sbjct: 198 ASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAW 257

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N+MI G+   G  +EAL+L +KM    I+ DD TY ++++  A+       K VH+ I+K
Sbjct: 258 NAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILK 317

Query: 365 TGFE-GYKF---VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW--------------- 405
                 + F   V+NALI +Y K   +D A  +F  M  +++I+W               
Sbjct: 318 NELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEE 377

Query: 406 ----------------TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE 449
                           T +I+G A +G  +E LK F  MR+ G  P     +  L+AC+ 
Sbjct: 378 AKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSV 437

Query: 450 LTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTAL 509
           L  LE G+Q+HA  +  G  SSLSV N+++ +YAKCG +  A  VF +M + D+++W ++
Sbjct: 438 LGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSM 497

Query: 510 IMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG 569
           I    Q+G G +A++ +DQML  G  PD ITF+ +L ACSHAGL E  R YF SM + YG
Sbjct: 498 IAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYG 557

Query: 570 IKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAA 629
           I P  DHYA M+DL  R+G    A+ ++D M  +P A VW+ALL+ CR+HG+++LG  AA
Sbjct: 558 ITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAA 617

Query: 630 NNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIF 689
             LF+L P N   YV LSN+Y+  G+W + A+VRKLM+ + +RKEP CSW+E  ++VH+F
Sbjct: 618 EQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVHVF 677

Query: 690 ISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAF 749
           + +D  HP    +Y  ++++ L +K+ GY+PD  F LH++E E KE  L+ HSEKLAV F
Sbjct: 678 MVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGF 737

Query: 750 GLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           G++ LP GA +R+FKN+R+CGDCH A K++S V  R II+RD  RFHHFK G+CSC DYW
Sbjct: 738 GIMKLPPGATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 165/592 (27%), Positives = 268/592 (45%), Gaps = 82/592 (13%)

Query: 20  IGPARYTHNVGNSVKPASD-LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYA 78
           +  A + H + +  KP    LNR L  +  S  +  A QLFE++ + D     T+I AY 
Sbjct: 31  LARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITAYC 90

Query: 79  NSGRLREAKKLFNETPF--KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
             G L   +++FN TP   ++   ++++I GY++ G    A ELF  M+ + +RP  +T 
Sbjct: 91  ALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTF 150

Query: 137 DNVLR-LCSLKGLLQRGEQFHGYAIKTCFD-LNAFVVTGLVDMYAK--------CKCIFE 186
            +VL  L    G  Q+  Q H   +KT    +++ V+  L+ +Y K        C  +  
Sbjct: 151 TSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVS 210

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNG------------------------YGFKAIEC 222
           A  LF   P  ++ + WTTMITGY +N                          G+    C
Sbjct: 211 ARKLFDEMPK-RDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGC 269

Query: 223 F-------RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN----VY 271
           F       R MR  G++ +  T+ +I++ACA V +   G QVH  IL +    N    + 
Sbjct: 270 FQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLS 329

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS------------------------- 306
           V +ALI +Y K   +D AR++     + N ++WN+                         
Sbjct: 330 VSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKN 389

Query: 307 ------MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
                 MI G A+ GF  E L LFK+M     +  DF +   L   +    L N + +H+
Sbjct: 390 LLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHA 449

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
            +V  G+E    V NA+I MYAK G ++ A  VF  M   D++SW S+I     HG   +
Sbjct: 450 QLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVK 509

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LV 479
           A++ F  M   G+ PD +   ++L+AC+   ++E G+      L+S G +      + +V
Sbjct: 510 AIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMV 569

Query: 480 LVYAKCGCINDANRVFDSMHTRD-VITWTALIMGCAQNGKGKEALQFYDQML 530
            ++ + G  + A  V DSM ++     W AL+ GC  +G     ++  +Q+ 
Sbjct: 570 DLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLF 621



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 158/329 (48%), Gaps = 12/329 (3%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  +  + ++DEA ++F  M  R+  TWN +++ Y N+GR+ EAK  F E P KN  
Sbjct: 332 NALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLL 391

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           T + +I G +  G   E  +LF QM+L+G+ P  +     L  CS+ G L+ G Q H   
Sbjct: 392 TLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQL 451

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           +   ++ +  V   ++ MYAKC  +  AE +F   P   + V+W +MI    Q+G+G KA
Sbjct: 452 VHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPS-VDLVSWNSMIAALGQHGHGVKA 510

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALID 278
           IE F  M  EGV  ++ TF ++LTAC+     + G      +L S G        + ++D
Sbjct: 511 IELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVD 570

Query: 279 MYAKCGDLDSARRLLE-YSEIDNEVSWNSMIVGFARQGFH----KEALSLFKKMHARDIK 333
           ++ + G    AR +++          W +++ G    G      + A  LFK M      
Sbjct: 571 LFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQ---- 626

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
            +D TY  + N +A     N    V  L+
Sbjct: 627 -NDGTYVLLSNIYADVGRWNEVAKVRKLM 654


>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
 gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
 gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
 gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
 gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 882

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 268/754 (35%), Positives = 426/754 (56%), Gaps = 3/754 (0%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
           Q+ +   + D F  N ++  Y+  G L  A+++F+E P ++  +W+SLI GYS++G   E
Sbjct: 131 QILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEE 190

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
           A E++ +++     P  +T+ +VL       ++++G+  HG+A+K+  +    V  GLV 
Sbjct: 191 ALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVA 250

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           MY K +   +A  +F    D ++ V++ TMI GY +     +++  F +  ++  + +  
Sbjct: 251 MYLKFRRPTDARRVFDEM-DVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLL 308

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           T  S+L AC  +        ++  +L +GF     V++ LID+YAKCGD+ +AR +    
Sbjct: 309 TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSM 368

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
           E  + VSWNS+I G+ + G   EA+ LFK M   + + D  TY  +++      DL   K
Sbjct: 369 ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGK 428

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +HS  +K+G      V+NALIDMYAK G +  +  +F+ M   D ++W ++I+ C   G
Sbjct: 429 GLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFG 488

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
            +   L+  + MR S + PD       L  CA L     G+++H   L+ G  S L + N
Sbjct: 489 DFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGN 548

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           +L+ +Y+KCGC+ +++RVF+ M  RDV+TWT +I      G+G++AL+ +  M   G  P
Sbjct: 549 ALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVP 608

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           D + F+ +++ACSH+GL +     FE M   Y I P  +HYAC++DLL RS K+ +A+  
Sbjct: 609 DSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEF 668

Query: 597 LDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
           +  M  +PDA++W ++L ACR  GD+E  ER +  + EL P +    +  SN Y+   KW
Sbjct: 669 IQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKW 728

Query: 657 EDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA 716
           +  + +RK +K + I K PG SW+E    VH+F S D   P    IY  ++ +  L+ + 
Sbjct: 729 DKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKE 788

Query: 717 GYVPDMNFALHNV-EEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
           GY+PD      N+ EEE K   +  HSE+LA+AFGLL    G P+++ KNLRVCGDCH  
Sbjct: 789 GYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEV 848

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            K IS +  R I++RD+NRFH FK G CSC D W
Sbjct: 849 TKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 151/513 (29%), Positives = 256/513 (49%), Gaps = 13/513 (2%)

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
           L    + H   I    D + F    L+D Y+  +    +  +F+     KN   W ++I 
Sbjct: 20  LNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIR 79

Query: 209 GYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEA 268
            +S+NG   +A+E +  +R   V  +++TFPS++ ACA +   + G  V+  IL  GFE+
Sbjct: 80  AFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFES 139

Query: 269 NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH 328
           +++V +AL+DMY++ G L  AR++ +   + + VSWNS+I G++  G+++EAL ++ ++ 
Sbjct: 140 DLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELK 199

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD 388
              I  D FT  SVL  F + + +   + +H   +K+G      VNN L+ MY K     
Sbjct: 200 NSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPT 259

Query: 389 CAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
            A  VF+ M  +D +S+ ++I G       EE+++ F +  +    PD + VSS+L AC 
Sbjct: 260 DARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACG 318

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
            L  L   + ++   LK+G     +V N L+ VYAKCG +  A  VF+SM  +D ++W +
Sbjct: 319 HLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNS 378

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
           +I G  Q+G   EA++ +  M+    + D+IT++ L+   +       A   F       
Sbjct: 379 IISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRL-----ADLKFGKGLHSN 433

Query: 569 GIKPGP----DHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLEL 624
           GIK G          +ID+  + G++ ++  +   M G  D   W  ++SAC   GD   
Sbjct: 434 GIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSM-GTGDTVTWNTVISACVRFGDFAT 492

Query: 625 GERAANNL--FELEPMNAMPYVQLSNMYSTAGK 655
           G +    +   E+ P  A   V L    S A K
Sbjct: 493 GLQVTTQMRKSEVVPDMATFLVTLPMCASLAAK 525



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 128/393 (32%), Positives = 203/393 (51%), Gaps = 10/393 (2%)

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYA----KCGDLDSA 289
            + + P I  A ++ S  +   ++H  ++S G +++ +    LID Y+        L   
Sbjct: 3   TRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVF 62

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
           RR+   S   N   WNS+I  F++ G   EAL  + K+    +  D +T+PSV+   A  
Sbjct: 63  RRV---SPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGL 119

Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
            D      V+  I+  GFE   FV NAL+DMY++ G L  A  VF+ M  +D++SW SLI
Sbjct: 120 FDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLI 179

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
           +G + HG YEEAL+ + +++ S I PD   VSS+L A   L V++ GQ +H   LKSG  
Sbjct: 180 SGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVN 239

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
           S + V+N LV +Y K     DA RVFD M  RD +++  +I G  +    +E+++ + + 
Sbjct: 240 SVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLEN 299

Query: 530 LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGK 589
           L +  KPD +T   +L AC H      A++ +  M K  G          +ID+  + G 
Sbjct: 300 LDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKA-GFVLESTVRNILIDVYAKCGD 357

Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHGDL 622
           +I A+ + + M  + D   W +++S     GDL
Sbjct: 358 MITARDVFNSMECK-DTVSWNSIISGYIQSGDL 389


>gi|125528625|gb|EAY76739.1| hypothetical protein OsI_04695 [Oryza sativa Indica Group]
          Length = 494

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 256/509 (50%), Positives = 332/509 (65%), Gaps = 25/509 (4%)

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           V+ N+ I   +R G H+ AL+LF +M AR ++ D++T P +LN  A       A     L
Sbjct: 10  VACNAAISRCSRAGLHRRALALFTEMRARGLRADEYTLPPILNSAALLRAPPAAALHALL 69

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           +       +  V NAL+D YAK   L  A  VF+ M  +DV++WTSL+TG A  GS+  A
Sbjct: 70  LRAG-LASHLHVANALVDAYAKLSRLGAARAVFDEMPRRDVVTWTSLVTGLARAGSHGLA 128

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           ++ + DM  +G+  D   V+++LS+CA  T LE G+ VHA  ++SG    LSV NSLV +
Sbjct: 129 VRAYRDMVAAGVATDEFAVAAVLSSCAGSTALELGRSVHAAAVRSGHEPFLSVGNSLVSM 188

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           YAK G + DA  VFD+M +R  ITWTALI+G                       PDY+TF
Sbjct: 189 YAKTGSLRDARTVFDAMRSRCAITWTALIVG-----------------------PDYVTF 225

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM- 600
           VGLLFACSHAGL +  R +F+SM   +GI PGPDHYACM+DLLGR+G+L EA  LLD+  
Sbjct: 226 VGLLFACSHAGLLDAGRAHFQSMQSEHGISPGPDHYACMVDLLGRAGRLGEAVDLLDRSP 285

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAA 660
             E DATVWKALL+ACR H +  L ERAA  ++ L+P +A+PYV LSN+YS A +W D A
Sbjct: 286 AAELDATVWKALLAACRTHRNAALAERAAGMVWRLDPTDAVPYVMLSNLYSRARRWGDVA 345

Query: 661 RVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
           RVR LM+SRGI KEPGCSWV      H+F + DR H    +IY K +E+   I+  G+VP
Sbjct: 346 RVRALMRSRGISKEPGCSWVVVAGVTHVFHAGDRDHQRAAEIYRKAEEMAARIRARGHVP 405

Query: 721 DMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYIS 780
           D  +AL +   EG+E+GLA+H E+LAVAFGLL +P  APIR++KNLRVCGDCH A+K ++
Sbjct: 406 DTEWALQDEAPEGREMGLAHHGERLAVAFGLLAVPAAAPIRVYKNLRVCGDCHAAIKMVA 465

Query: 781 AVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            VY R IILRDSN FHH K G+CSCGDYW
Sbjct: 466 EVYGREIILRDSNCFHHMKDGSCSCGDYW 494



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 159/323 (49%), Gaps = 29/323 (8%)

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
           P GK  VA    I+  S+ G   +A+  F +MR  G+ ++++T P IL + A + A    
Sbjct: 4   PGGKGLVACNAAISRCSRAGLHRRALALFTEMRARGLRADEYTLPPILNSAALLRAPPAA 63

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
           A     +L +G  ++++V +AL+D YAK   L +AR + +     + V+W S++ G AR 
Sbjct: 64  ALHAL-LLRAGLASHLHVANALVDAYAKLSRLGAARAVFDEMPRRDVVTWTSLVTGLARA 122

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
           G H  A+  ++ M A  +  D+F   +VL+  A +  L   +SVH+  V++G E +  V 
Sbjct: 123 GSHGLAVRAYRDMVAAGVATDEFAVAAVLSSCAGSTALELGRSVHAAAVRSGHEPFLSVG 182

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           N+L+ MYAK G+L  A  VF+ M+ +  I+WT+LI G                       
Sbjct: 183 NSLVSMYAKTGSLRDARTVFDAMRSRCAITWTALIVG----------------------- 219

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLVLVYAKCGCINDAN 492
           PD+V    +L AC+   +L+ G + H   ++S    S   D+   +V +  + G + +A 
Sbjct: 220 PDYVTFVGLLFACSHAGLLDAG-RAHFQSMQSEHGISPGPDHYACMVDLLGRAGRLGEAV 278

Query: 493 RVFDSMHTR--DVITWTALIMGC 513
            + D       D   W AL+  C
Sbjct: 279 DLLDRSPAAELDATVWKALLAAC 301



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 2/215 (0%)

Query: 96  KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
           K     ++ I   S  GL   A  LF +M+  G R  +YTL  +L   +L          
Sbjct: 7   KGLVACNAAISRCSRAGLHRRALALFTEMRARGLRADEYTLPPILNSAALLRAPPAAALH 66

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGY 215
                      +  V   LVD YAK   +  A  +F   P  ++ V WT+++TG ++ G 
Sbjct: 67  ALLLRAGLAS-HLHVANALVDAYAKLSRLGAARAVFDEMPR-RDVVTWTSLVTGLARAGS 124

Query: 216 GFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSA 275
              A+  +RDM   GV +++F   ++L++CA  +A + G  VH   + SG E  + V ++
Sbjct: 125 HGLAVRAYRDMVAAGVATDEFAVAAVLSSCAGSTALELGRSVHAAAVRSGHEPFLSVGNS 184

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
           L+ MYAK G L  AR + +       ++W ++IVG
Sbjct: 185 LVSMYAKTGSLRDARTVFDAMRSRCAITWTALIVG 219



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 98/242 (40%), Gaps = 29/242 (11%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++ AYA   RL  A+ +F+E P ++  TW+SL+ G +  G    A   +  M   G  
Sbjct: 82  NALVDAYAKLSRLGAARAVFDEMPRRDVVTWTSLVTGLARAGSHGLAVRAYRDMVAAGVA 141

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
             ++ +  VL  C+    L+ G   H  A+++  +    V   LV MYAK   + +A  +
Sbjct: 142 TDEFAVAAVLSSCAGSTALELGRSVHAAAVRSGHEPFLSVGNSLVSMYAKTGSLRDARTV 201

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F      +  + WT +I G                        +  TF  +L AC+    
Sbjct: 202 FDAM-RSRCAITWTALIVG-----------------------PDYVTFVGLLFACSHAGL 237

Query: 251 RDFG-AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS---EIDNEVSWNS 306
            D G A         G        + ++D+  + G L  A  LL+ S   E+D  V W +
Sbjct: 238 LDAGRAHFQSMQSEHGISPGPDHYACMVDLLGRAGRLGEAVDLLDRSPAAELDATV-WKA 296

Query: 307 MI 308
           ++
Sbjct: 297 LL 298


>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 281/697 (40%), Positives = 422/697 (60%), Gaps = 34/697 (4%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDL----NAFVVTGLVDMYAKCKCIFE 186
           PS Y  ++   L S  G L   +        T FDL    N F    L++ YAK   I  
Sbjct: 42  PSTYLSNHFTLLYSKCGSLHNAQ--------TSFDLTQYPNVFSYNTLINAYAKHSLIHL 93

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A  +F   P   + V++ T+I  Y+  G    A+  F ++R      + FT   ++ AC 
Sbjct: 94  ARQVFDEIPQ-PDIVSYNTLIAAYADRGECRPALRLFAEVRELRFGLDGFTLSGVIIACG 152

Query: 247 AVSARDFG--AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL-EYSEID--NE 301
                D G   Q+H  ++  G++    V +A++  Y++ G L+ ARR+  E  E    +E
Sbjct: 153 ----DDVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDE 208

Query: 302 VSWNSMIV--GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           VSWN+MIV  G  R+G   EA+ LF++M  R +K+D FT  SVL  F    DL      H
Sbjct: 209 VSWNAMIVACGQHREGL--EAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFH 266

Query: 360 SLIVKTGFEGYKFVNNALIDMYAK--QGNLDCAFMVFNLMQDKDVISWTSLITGCA-YHG 416
            +++K+GF G   V + LID+Y+K   G ++C   VF  +   D++ W ++I+G + Y  
Sbjct: 267 GMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECR-KVFEEIAAPDLVLWNTMISGFSQYED 325

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG-GCSSLSVD 475
             E+ +  F +M+ +G  PD      + SAC+ L+    G+QVHA+ +KS    + +SV+
Sbjct: 326 LSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVN 385

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           N+LV +Y+KCG ++DA RVFD+M   ++++  ++I G AQ+G   E+L+ ++ ML +   
Sbjct: 386 NALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIA 445

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           P+ ITF+ +L AC H G  E  + YF  M + + I+P  +HY+CMIDLLGR+GKL EA+ 
Sbjct: 446 PNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAER 505

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
           +++ M   P +  W  LL ACR HG++EL  +AAN   +LEP NA PYV LSNMY++A +
Sbjct: 506 IIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAAR 565

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
           WE+AA V++LM+ RG++K+PGCSW+E + +VH+F++ED  HP+  +I+  + EI+  +K+
Sbjct: 566 WEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGEILRKMKQ 625

Query: 716 AGYVPDMNFAL---HNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDC 772
           AGYVPD+ +AL     VE + KE  L YHSEKLAVAFGL++  +  PI + KNLR+CGDC
Sbjct: 626 AGYVPDIRWALVKDEEVEPDEKERRLLYHSEKLAVAFGLISTEEWVPILVVKNLRICGDC 685

Query: 773 HTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           H A+K ISA+  R I +RD++RFH FK G+CSCGDYW
Sbjct: 686 HNAIKLISAITGREITVRDTHRFHCFKEGHCSCGDYW 722



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 145/523 (27%), Positives = 263/523 (50%), Gaps = 10/523 (1%)

Query: 16  RSKIIGPARYTHNVGNSVKPASDL-NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMI 74
           R  I G   +     + + P++ L N   + +S  G +  A   F+     + F++NT+I
Sbjct: 23  RDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLTQYPNVFSYNTLI 82

Query: 75  AAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQY 134
            AYA    +  A+++F+E P  +  ++++LI  Y++ G    A  LF +++   +    +
Sbjct: 83  NAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRFGLDGF 142

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
           TL  V+  C     L R  Q H + +   +D  A V   ++  Y++   + EA  +F+  
Sbjct: 143 TLSGVIIACGDDVGLVR--QLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARRVFREM 200

Query: 195 PD--GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
            +  G++ V+W  MI    Q+  G +A+E FR+M   G++ + FT  S+LTA   V    
Sbjct: 201 GEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLV 260

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKC-GDLDSARRLLEYSEIDNEVSWNSMIVGF 311
            G Q HG ++ SGF  N +V S LID+Y+KC G +   R++ E     + V WN+MI GF
Sbjct: 261 GGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGF 320

Query: 312 AR-QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           ++ +   ++ +  F++M       DD ++  V +  ++    +  K VH+L +K+     
Sbjct: 321 SQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYN 380

Query: 371 KF-VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
           +  VNNAL+ MY+K GN+  A  VF+ M + +++S  S+I G A HG   E+L+ F  M 
Sbjct: 381 RVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELML 440

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL-VYAKCGCI 488
              I P+ +   ++LSAC     +E GQ+   +  +       +   S ++ +  + G +
Sbjct: 441 QKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKL 500

Query: 489 NDANRVFDSM-HTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
            +A R+ ++M      I W  L+  C ++G  + A++  ++ L
Sbjct: 501 KEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFL 543



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 128/512 (25%), Positives = 225/512 (43%), Gaps = 94/512 (18%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           TF ++L AC A      G  +H     S    + Y+ +    +Y+KCG L +A+   + +
Sbjct: 11  TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLT 70

Query: 297 EIDNE-------------------------------VSWNSMIVGFARQGFHKEALSLFK 325
           +  N                                VS+N++I  +A +G  + AL LF 
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFA 130

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           ++      +D FT   V+   A   D+   + +H  +V  G++ Y  VNNA++  Y+++G
Sbjct: 131 EVRELRFGLDGFTLSGVI--IACGDDVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKG 188

Query: 386 NLDCAFMVFNLMQD---KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
            L+ A  VF  M +   +D +SW ++I  C  H    EA++ F +M   G+  D   ++S
Sbjct: 189 FLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMAS 248

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC-GCINDANRVFDSMHTR 501
           +L+A   +  L  G Q H + +KSG   +  V + L+ +Y+KC G + +  +VF+ +   
Sbjct: 249 VLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAP 308

Query: 502 DVITWTALIMGCAQ-NGKGKEALQFYDQMLARGTKPDYITFVGLLFACS----------- 549
           D++ W  +I G +Q     ++ +  + +M   G  PD  +FV +  ACS           
Sbjct: 309 DLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQV 368

Query: 550 HA-------------------------GLAENARWYFESMDKVYGIKPGPDH----YACM 580
           HA                         G   +AR  F++M         P+H       M
Sbjct: 369 HALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTM---------PEHNMVSLNSM 419

Query: 581 IDLLGRSGKLIEAKALLDQMVGE---PDATVWKALLSACRVHGDLELGERAANNL---FE 634
           I    + G  +E+  L + M+ +   P+   + A+LSAC   G +E G++  N +   F 
Sbjct: 420 IAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFR 479

Query: 635 LEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
           +EP  A  Y  + ++   AGK ++A R+ + M
Sbjct: 480 IEP-EAEHYSCMIDLLGRAGKLKEAERIIETM 510


>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 264/716 (36%), Positives = 400/716 (55%), Gaps = 45/716 (6%)

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           ++L+ C     L+ G Q H   +    D+  F+ + L+++Y +  C+ +A  +F    + 
Sbjct: 15  SILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE- 73

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           +N  +WT ++  Y   G   + I+ F  M  EGV  + F FP +  AC+ +     G  V
Sbjct: 74  RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 133

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           +  +LS GFE N  V+ +++DM+ KCG +D ARR  E  E  +   WN M+ G+  +G  
Sbjct: 134 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF 193

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG-FEGYKFVNNA 376
           K+AL++F+KM    +K +  T  S ++   +   L + + +H   +K    +    V N+
Sbjct: 194 KKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNS 253

Query: 377 LIDMYAKQGNLDCAFM-------------------------------------------V 393
           L+D YAK  +++ A                                             V
Sbjct: 254 LVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSV 313

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           F+ +  +DV+ W S+I+ CA  G    AL    +M +S +  + V + S L AC++L  L
Sbjct: 314 FSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAAL 373

Query: 454 EFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC 513
             G+++H   ++ G  +   + NSL+ +Y +CG I  + R+FD M  RD+++W  +I   
Sbjct: 374 RQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVY 433

Query: 514 AQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPG 573
             +G G +A+  + Q    G KP++ITF  LL ACSH+GL E    YF+ M   Y + P 
Sbjct: 434 GMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPA 493

Query: 574 PDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLF 633
            + YACM+DLL R+G+  E    +++M  EP+A VW +LL ACR+H + +L E AA  LF
Sbjct: 494 VEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLF 553

Query: 634 ELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISED 693
           ELEP ++  YV ++N+YS AG+WEDAA++R LMK RG+ K PGCSW+E   ++H F+  D
Sbjct: 554 ELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGD 613

Query: 694 RGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLT 753
             HPL   I +K++ +   IKE GYVPD NF L +V+E+ KE  L  HSEK+A+AFGL++
Sbjct: 614 TSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLIS 673

Query: 754 LPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
              G P+RI KNLRVCGDCH+A K+IS V  R II+RD+ RFHHF  G CSCGDYW
Sbjct: 674 TTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 729



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 217/445 (48%), Gaps = 45/445 (10%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            QL     D   F  + ++  Y  +G + +A+++F++   +N F+W++++  Y   G   
Sbjct: 34  AQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYE 93

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           E  +LF+ M  EG RP  +    V + CS     + G+  + Y +   F+ N+ V   ++
Sbjct: 94  ETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSIL 153

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DM+ KC  +  A   F+   + K+   W  M++GY+  G   KA+  FR M +EGV+ N 
Sbjct: 154 DMFIKCGRMDIARRFFEEI-EFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNS 212

Query: 236 FTFPSILTACAAVSARDFGAQVHG-CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
            T  S ++AC  +S    G ++HG CI     ++++ V ++L+D YAKC  ++ ARR   
Sbjct: 213 ITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFG 272

Query: 295 YSEIDNEVSWNSM--IVGFARQGFHKEALSLFKKMH----------ARD----------- 331
             +  + VSWN+M  + GF + G  K AL  F++MH           RD           
Sbjct: 273 MIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISAC 332

Query: 332 --------------------IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
                               ++++  T  S L   +    L   K +H  I++ G +   
Sbjct: 333 AQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCN 392

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
           F+ N+LIDMY + G++  +  +F+LM  +D++SW  +I+    HG   +A+  F   R  
Sbjct: 393 FILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTM 452

Query: 432 GICPDHVVVSSILSACAELTVLEFG 456
           G+ P+H+  +++LSAC+   ++E G
Sbjct: 453 GLKPNHITFTNLLSACSHSGLIEEG 477



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/478 (25%), Positives = 225/478 (47%), Gaps = 51/478 (10%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           + SIL  C  +     G QVH  ++ +G +   ++ S L+++Y + G ++ ARR+ +   
Sbjct: 13  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
             N  SW +++  +   G ++E + LF  M    ++ D F +P V    +   +    K 
Sbjct: 73  ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 132

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           V+  ++  GFEG   V  +++DM+ K G +D A   F  ++ KDV  W  +++G    G 
Sbjct: 133 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 192

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC-SSLSVDN 476
           +++AL  F  M + G+ P+ + ++S +SAC  L++L  G+++H   +K     S L V N
Sbjct: 193 FKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGN 252

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTAL--IMGCAQNGKGKEALQFYDQM----- 529
           SLV  YAKC  +  A R F  +   D+++W A+  + G  Q G GK AL+F+ +M     
Sbjct: 253 SLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACS 312

Query: 530 -LARGTKPDYITFVGLLFACSHAGLAENARWYFESMD-------------------KVYG 569
             +  +  D + +  ++ AC+ +G + NA      M+                   K+  
Sbjct: 313 VFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAA 372

Query: 570 IKPGPDHYA---------------CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
           ++ G + +                 +ID+ GR G + +++ + D M  + D   W  ++S
Sbjct: 373 LRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLM-PQRDLVSWNVMIS 431

Query: 615 ACRVHGDLELGERAANNLFELEPMNAMP-YVQLSNMYST---AGKWEDAARVRKLMKS 668
              +HG    G  A N   +   M   P ++  +N+ S    +G  E+  +  K+MK+
Sbjct: 432 VYGMHG---FGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKT 486



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 114/471 (24%), Positives = 213/471 (45%), Gaps = 79/471 (16%)

Query: 72  TMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRP 131
           +++  +   GR+  A++ F E  FK+ F W+ ++ GY++ G   +A  +F +M LEG +P
Sbjct: 151 SILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKP 210

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT-CFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           +  T+ + +  C+   LL+ G + HGY IK    D +  V   LVD YAKC+ +  A   
Sbjct: 211 NSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRK 270

Query: 191 FKM--------------------FPDGK----------------------NHVAWTTMIT 208
           F M                    + DGK                      + V W ++I+
Sbjct: 271 FGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIIS 330

Query: 209 GYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEA 268
             +Q+G    A++  R+M +  VE N  T  S L AC+ ++A   G ++H  I+  G + 
Sbjct: 331 ACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDT 390

Query: 269 NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH 328
             ++ ++LIDMY +CG +  +RR+ +     + VSWN MI  +   GF  +A++LF++  
Sbjct: 391 CNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFR 450

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN------------A 376
              +K +  T+ ++L+  +           HS +++ G++ +K +               
Sbjct: 451 TMGLKPNHITFTNLLSACS-----------HSGLIEEGWKYFKMMKTEYAMDPAVEQYAC 499

Query: 377 LIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGS---YEEALKYFSDMRISG 432
           ++D+ ++ G  +        M  + +   W SL+  C  H +    E A +Y  ++    
Sbjct: 500 MVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQS 559

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG-----GCSSLSVDNSL 478
              ++V++++I SA       E   ++  +  + G     GCS + V   L
Sbjct: 560 -SGNYVLMANIYSAAGR---WEDAAKIRCLMKERGVTKPPGCSWIEVKRKL 606



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 12/195 (6%)

Query: 435 PDHVV--VSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
           PD  +   +SIL  C +L  L  G QVHA  + +G      + + L+ VY + GC+ DA 
Sbjct: 6   PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDAR 65

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
           R+FD M  R+V +WTA++      G  +E ++ +  M+  G +PD+  F  +  ACS   
Sbjct: 66  RMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSE-- 123

Query: 553 LAENARWYFESMDKVYGIKPGPDHYAC----MIDLLGRSGKLIEAKALLDQMVGEPDATV 608
             +N R   +  D  Y +  G +  +C    ++D+  + G++  A+   ++ +   D  +
Sbjct: 124 -LKNYRVGKDVYD--YMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEE-IEFKDVFM 179

Query: 609 WKALLSACRVHGDLE 623
           W  ++S     G+ +
Sbjct: 180 WNIMVSGYTSKGEFK 194



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 73/146 (50%), Gaps = 3/146 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D   F  N++I  Y   G +++++++F+  P ++  +W+ +I  Y  +G  ++A  LF Q
Sbjct: 389 DTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQ 448

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV--VTGLVDMYAKC 181
            +  G +P+  T  N+L  CS  GL++ G ++    +KT + ++  V     +VD+ ++ 
Sbjct: 449 FRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFK-MMKTEYAMDPAVEQYACMVDLLSRA 507

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMI 207
               E     +  P   N   W +++
Sbjct: 508 GQFNETLEFIEKMPFEPNAAVWGSLL 533


>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 937

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 270/740 (36%), Positives = 422/740 (57%), Gaps = 2/740 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N++I+   + G +  A  +F++   ++  +W+S+   Y+  G   E+F +F  M+     
Sbjct: 199 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 258

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            +  T+  +L +       + G   HG  +K  FD    V   L+ MYA      EA  +
Sbjct: 259 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 318

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           FK  P  K+ ++W +++  +  +G    A+     M   G   N  TF S L AC     
Sbjct: 319 FKQMPT-KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 377

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            + G  +HG ++ SG   N  + +AL+ MY K G++  +RR+L      + V+WN++I G
Sbjct: 378 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 437

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEG 369
           +A      +AL+ F+ M    +  +  T  SVL+ C      L   K +H+ IV  GFE 
Sbjct: 438 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 497

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
            + V N+LI MYAK G+L  +  +FN + ++++I+W +++   A+HG  EE LK  S MR
Sbjct: 498 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 557

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
             G+  D    S  LSA A+L VLE GQQ+H + +K G      + N+   +Y+KCG I 
Sbjct: 558 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG 617

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
           +  ++      R + +W  LI    ++G  +E    + +ML  G KP ++TFV LL ACS
Sbjct: 618 EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS 677

Query: 550 HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
           H GL +    Y++ + + +G++P  +H  C+IDLLGRSG+L EA+  + +M  +P+  VW
Sbjct: 678 HGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVW 737

Query: 610 KALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
           ++LL++C++HG+L+ G +AA NL +LEP +   YV  SNM++T G+WED   VRK M  +
Sbjct: 738 RSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFK 797

Query: 670 GIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNV 729
            I+K+  CSWV+   +V  F   DR HP   +IY+K+++I  LIKE+GYV D + AL + 
Sbjct: 798 NIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDT 857

Query: 730 EEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIIL 789
           +EE KE  L  HSE+LA+A+ L++ P+G+ +RIFKNLR+C DCH+  K++S V  R I+L
Sbjct: 858 DEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVL 917

Query: 790 RDSNRFHHFKAGNCSCGDYW 809
           RD  RFHHF+ G CSC DYW
Sbjct: 918 RDQYRFHHFERGLCSCKDYW 937



 Score =  252 bits (643), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 156/549 (28%), Positives = 274/549 (49%), Gaps = 5/549 (0%)

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
           Y   GR++ A+ LF+  P +N  +W++++ G    GL +E  E F +M   G +PS + +
Sbjct: 2   YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61

Query: 137 DNVLRLCSLKG-LLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
            +++  C   G + + G Q HG+  K+    + +V T ++ +Y     +  +  +F+  P
Sbjct: 62  ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGA 255
           D +N V+WT+++ GYS  G   + I+ ++ MR EGV  N+ +   ++++C  +     G 
Sbjct: 122 D-RNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           Q+ G ++ SG E+ + V+++LI M    G++D A  + +     + +SWNS+   +A+ G
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
             +E+  +F  M     +++  T  ++L+           + +H L+VK GF+    V N
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN 300

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
            L+ MYA  G    A +VF  M  KD+ISW SL+      G   +AL     M  SG   
Sbjct: 301 TLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV 360

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           ++V  +S L+AC      E G+ +H + + SG   +  + N+LV +Y K G ++++ RV 
Sbjct: 361 NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 420

Query: 496 DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG-LA 554
             M  RDV+ W ALI G A++    +AL  +  M   G   +YIT V +L AC   G L 
Sbjct: 421 LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLL 480

Query: 555 ENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
           E  +     +    G +        +I +  + G L  ++ L + +    +   W A+L+
Sbjct: 481 ERGKPLHAYIVSA-GFESDEHVKNSLITMYAKCGDLSSSQDLFNGL-DNRNIITWNAMLA 538

Query: 615 ACRVHGDLE 623
           A   HG  E
Sbjct: 539 ANAHHGHGE 547



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 155/566 (27%), Positives = 277/566 (48%), Gaps = 18/566 (3%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +    ++  Y   G +  ++K+F E P +N  +W+SL+ GYS+ G   E  +++  M+
Sbjct: 93  DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMR 152

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            EG   ++ ++  V+  C L      G Q  G  +K+  +    V   L+ M      + 
Sbjct: 153 GEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVD 212

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A Y+F    + ++ ++W ++   Y+QNG+  ++   F  MR    E N  T  ++L+  
Sbjct: 213 YANYIFDQMSE-RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVL 271

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
             V  + +G  +HG ++  GF++ V V + L+ MYA  G    A  + +     + +SWN
Sbjct: 272 GHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWN 331

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVK 364
           S++  F   G   +AL L   M +    ++  T+ S L  CF  +      + +H L+V 
Sbjct: 332 SLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF-FEKGRILHGLVVV 390

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
           +G    + + NAL+ MY K G +  +  V   M  +DV++W +LI G A     ++AL  
Sbjct: 391 SGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAA 450

Query: 425 FSDMRISGICPDHVVVSSILSAC-AELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
           F  MR+ G+  +++ V S+LSAC     +LE G+ +HA  + +G  S   V NSL+ +YA
Sbjct: 451 FQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYA 510

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG ++ +  +F+ +  R++ITW A++   A +G G+E L+   +M + G   D  +F  
Sbjct: 511 KCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSE 570

Query: 544 LLFACSHAGLAENARWYFESMDKVYG--IKPGPDH----YACMIDLLGRSGKLIEAKALL 597
            L A +   + E  +       +++G  +K G +H    +    D+  + G++ E   +L
Sbjct: 571 GLSAAAKLAVLEEGQ-------QLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKML 623

Query: 598 DQMVGEPDATVWKALLSACRVHGDLE 623
              V     + W  L+SA   HG  E
Sbjct: 624 PPSVNRSLPS-WNILISALGRHGYFE 648



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 172/344 (50%), Gaps = 15/344 (4%)

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
           MY K G +  AR L +   + NEVSWN+M+ G  R G + E +  F+KM    IK   F 
Sbjct: 1   MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60

Query: 339 YPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
             S++  C  S         VH  + K+G     +V+ A++ +Y   G + C+  VF  M
Sbjct: 61  IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
            D++V+SWTSL+ G +  G  EE +  +  MR  G+  +   +S ++S+C  L     G+
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
           Q+    +KSG  S L+V+NSL+ +    G ++ AN +FD M  RD I+W ++    AQNG
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPGPD 575
             +E+ + +  M     + +  T   LL    H    ++ +W       ++G  +K G D
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH---VDHQKWG----RGIHGLVVKMGFD 293

Query: 576 HYACMIDLLGR----SGKLIEAKALLDQMVGEPDATVWKALLSA 615
              C+ + L R    +G+ +EA  +  QM  + D   W +L+++
Sbjct: 294 SVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMAS 336



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 118/249 (47%), Gaps = 7/249 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           + D    N++I  YA  G L  ++ LFN    +N  TW++++   +++G   E  +L  +
Sbjct: 496 ESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSK 555

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+  G    Q++    L   +   +L+ G+Q HG A+K  F+ ++F+     DMY+KC  
Sbjct: 556 MRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGE 615

Query: 184 IFEAEYLFKMFPDGKNHV--AWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
           I E   + KM P   N    +W  +I+   ++GY  +    F +M   G++    TF S+
Sbjct: 616 IGE---VVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSL 672

Query: 242 LTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID- 299
           LTAC+     D G   +  I    G E  +     +ID+  + G L  A   +    +  
Sbjct: 673 LTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKP 732

Query: 300 NEVSWNSMI 308
           N++ W S++
Sbjct: 733 NDLVWRSLL 741


>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 269/741 (36%), Positives = 401/741 (54%), Gaps = 79/741 (10%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEA---FELFWQMQLEGY 129
           +++ YA  G L+E +++F+    KN + W+ ++  Y+  G   E+   F++  +  +EG 
Sbjct: 140 LVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 199

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           RP                                                       A  
Sbjct: 200 RPES-----------------------------------------------------ASE 206

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           LF    D ++ ++W +MI+GY  NG   + +E ++ M   G++ +  T  S+L  CA   
Sbjct: 207 LFDKLCD-RDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSG 265

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
               G  VH   + S FE  +   + L+DMY+KCGDLD A R+ E     N VSW SMI 
Sbjct: 266 TLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIA 325

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           G+ R G    A+ L ++M    +K+D     S+L+  A +  L+N K VH  I     E 
Sbjct: 326 GYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMES 385

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
             FV NAL+DMY K G++D A  VF+ M  KD+ISW ++I                    
Sbjct: 386 NLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMI-------------------- 425

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
              + PD   ++ IL ACA L+ LE G+++H   L++G  S   V N+LV +Y KCG + 
Sbjct: 426 -GELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLG 484

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
            A  +FD + ++D+++WT +I G   +G G EA+  +++M   G +PD ++F+ +L+ACS
Sbjct: 485 LARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS 544

Query: 550 HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
           H+GL E    +F  M   + I+P  +HYACM+DLL R+G L +A   ++ +   PDAT+W
Sbjct: 545 HSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIW 604

Query: 610 KALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
            ALL  CR++ D+EL E+ A  +FELEP N   YV L+N+Y+ A KWE+  R+R+ +  +
Sbjct: 605 GALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKK 664

Query: 670 GIRKEPGCSWVETNSQVHIFIS-EDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHN 728
           G+RK PGCSW+E   +V++F+S  +  HP    I S + ++   +KE GY P   +AL N
Sbjct: 665 GLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALIN 724

Query: 729 VEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHII 788
            +E  KE+ L  HSEKLA+AFGLL LP    +R+ KNLRVCGDCH   K++S    R I+
Sbjct: 725 ADEMQKEMALCGHSEKLAMAFGLLALPPRKTVRVTKNLRVCGDCHEMAKFMSKETRREIV 784

Query: 789 LRDSNRFHHFKAGNCSCGDYW 809
           LRDSNRFHHFK G CSC  +W
Sbjct: 785 LRDSNRFHHFKNGYCSCRGFW 805



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 157/522 (30%), Positives = 257/522 (49%), Gaps = 47/522 (9%)

Query: 17  SKIIGPARYTHNVGNSVKPASD--LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTM 73
           SK +   +  H++  S   A D  L   LV  ++  G++ E  ++F+ M  ++ + WN M
Sbjct: 112 SKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFM 171

Query: 74  IAAYANSGRLRE--------------------AKKLFNETPFKNFFTWSSLIYGYSNYGL 113
           ++ YA  G  +E                    A +LF++   ++  +W+S+I GY + GL
Sbjct: 172 VSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGL 231

Query: 114 DIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG 173
                E++ QM   G      T+ +VL  C+  G L  G+  H  AIK+ F+        
Sbjct: 232 TERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNT 291

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
           L+DMY+KC  +  A  +F+   + +N V+WT+MI GY+++G    AI   + M  EGV+ 
Sbjct: 292 LLDMYSKCGDLDGALRVFEKMGE-RNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKL 350

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
           +     SIL ACA   + D G  VH  I ++  E+N++V +AL+DMY KCG +D A  + 
Sbjct: 351 DVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVF 410

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
               + + +SWN+MI                      ++K D  T   +L   AS   L 
Sbjct: 411 STMVVKDIISWNTMI---------------------GELKPDSRTMACILPACASLSALE 449

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
             K +H  I++ G+   + V NAL+D+Y K G L  A ++F+++  KD++SWT +I+G  
Sbjct: 450 RGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYG 509

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SL 472
            HG   EA+  F++MR +GI PD V   SIL AC+   +LE G +   +          L
Sbjct: 510 MHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKL 569

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMGC 513
                +V + ++ G ++ A    +++    D   W AL+ GC
Sbjct: 570 EHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGC 611



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 143/477 (29%), Positives = 209/477 (43%), Gaps = 86/477 (18%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL--- 293
           T+ S+L  CA   +   G +VH  I S+    +  +   L+ +YA CGDL   RR+    
Sbjct: 101 TYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTM 160

Query: 294 -------------EYSEI----------------------------------DNEV-SWN 305
                        EY++I                                  D +V SWN
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWN 220

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           SMI G+   G  +  L ++K+M    I +D  T  SVL   A++  L+  K+VHSL +K+
Sbjct: 221 SMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
            FE     +N L+DMY+K G+LD A  VF  M +++V+SWTS+I G    G  + A++  
Sbjct: 281 TFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLL 340

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             M   G+  D V  +SIL ACA    L+ G+ VH     +   S+L V N+L+ +Y KC
Sbjct: 341 QQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKC 400

Query: 486 GCINDANRVFDSMHTRDVITWTALI--------------MGCAQNGKGKEALQFYDQMLA 531
           G ++ AN VF +M  +D+I+W  +I                CA     +   + +  +L 
Sbjct: 401 GSMDGANSVFSTMVVKDIISWNTMIGELKPDSRTMACILPACASLSALERGKEIHGYILR 460

Query: 532 RGTKPDYIT---FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD--HYACMIDLLGR 586
            G   D       V L   C   GL   AR  F+ +       P  D   +  MI   G 
Sbjct: 461 NGYSSDRHVANALVDLYVKCGVLGL---ARLLFDMI-------PSKDLVSWTVMISGYGM 510

Query: 587 SGKLIEAKALLDQMVG---EPDATVWKALLSACRVHGDLELGER---AANNLFELEP 637
            G   EA A  ++M     EPD   + ++L AC   G LE G R      N F +EP
Sbjct: 511 HGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEP 567



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 186/400 (46%), Gaps = 52/400 (13%)

Query: 42  ALVDFSNSGEIDEAGQLFEKMSDRDGFTW-----NTMIAAYANSGRLREAKKLFNETPFK 96
            LV  +NSG +   G+    ++ +  F       NT++  Y+  G L  A ++F +   +
Sbjct: 257 VLVGCANSGTLS-LGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGER 315

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
           N  +W+S+I GY+  G    A  L  QM+ EG +       ++L  C+  G L  G+  H
Sbjct: 316 NVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVH 375

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
            Y      + N FV   L+DMY KC  +  A  +F      K+ ++W TMI         
Sbjct: 376 DYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMV-VKDIISWNTMIG-------- 426

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
               E   D R         T   IL ACA++SA + G ++HG IL +G+ ++ +V +AL
Sbjct: 427 ----ELKPDSR---------TMACILPACASLSALERGKEIHGYILRNGYSSDRHVANAL 473

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           +D+Y KCG L  AR L +     + VSW  MI G+   G+  EA++ F +M    I+ D+
Sbjct: 474 VDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDE 533

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN------------ALIDMYAKQ 384
            ++ S+L  +A +         HS +++ G+  +  + N             ++D+ ++ 
Sbjct: 534 VSFISIL--YACS---------HSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRT 582

Query: 385 GNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           GNL  A+  +  L    D   W +L+ GC  +   E A K
Sbjct: 583 GNLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEK 622



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 100/396 (25%), Positives = 174/396 (43%), Gaps = 72/396 (18%)

Query: 298 IDNEVS-WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
           ID +V+ +N+ I+ F + G  + A+ L       +++    TY SVL   A +  L + K
Sbjct: 62  IDRQVTDYNAKILHFCQLGNLENAMELVCMCQKSELETK--TYSSVLQLCAGSKSLTDGK 119

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ------------------ 398
            VHS+I        + +   L+ +YA  G+L     VF+ M+                  
Sbjct: 120 KVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG 179

Query: 399 ---------------------------------DKDVISWTSLITGCAYHGSYEEALKYF 425
                                            D+DVISW S+I+G   +G  E  L+ +
Sbjct: 180 DFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIY 239

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             M   GI  D   + S+L  CA    L  G+ VH++ +KS     ++  N+L+ +Y+KC
Sbjct: 240 KQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKC 299

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G ++ A RVF+ M  R+V++WT++I G  ++G+   A++   QM   G K D +    +L
Sbjct: 300 GDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSIL 359

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYAC--MIDLLGRSGKLIEAKALL------ 597
            AC+ +G  +N +   +  D +       + + C  ++D+  + G +  A ++       
Sbjct: 360 HACARSGSLDNGK---DVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVK 416

Query: 598 -----DQMVGE--PDATVWKALLSACRVHGDLELGE 626
                + M+GE  PD+     +L AC     LE G+
Sbjct: 417 DIISWNTMIGELKPDSRTMACILPACASLSALERGK 452


>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
          Length = 755

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 282/770 (36%), Positives = 432/770 (56%), Gaps = 56/770 (7%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N+A+     +G + +A +LF  M  R   T+N M+A Y+ +GRL  A  LF   P  + +
Sbjct: 42  NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNY 101

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           ++++L++  +      +A  LF +M +        T + ++   +  GL+     +   A
Sbjct: 102 SYNTLLHALAVSSSLADARGLFDEMPVR----DSVTYNVMISSHANHGLVSLARHYFDLA 157

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
            +     +A    G++  Y +   + EA  LF    +  + ++W  +++GY Q G   +A
Sbjct: 158 PEK----DAVSWNGMLAAYVRNGRVEEARGLFNSRTEW-DAISWNALMSGYVQWGKMSEA 212

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
            E F  M                        RD    V   I+ SG              
Sbjct: 213 RELFDRM----------------------PGRDV---VSWNIMVSG-------------- 233

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           YA+ GD+  ARRL + + + +  +W +++ G+A+ G  +EA  +F  M  R+      ++
Sbjct: 234 YARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNA----VSW 289

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
            +++  +     ++ AK + +++       +    N ++  YA+ G L+ A  VF+ M  
Sbjct: 290 NAMVAAYIQRRMMDEAKELFNMMPCRNVASW----NTMLTGYAQAGMLEEAKAVFDTMPQ 345

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           KD +SW +++   +  G  EE L+ F +M   G   +    + +LS CA++  LE G Q+
Sbjct: 346 KDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQL 405

Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKG 519
           H   +++G      V N+L+ +Y KCG + DA   F+ M  RDV++W  +I G A++G G
Sbjct: 406 HGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFG 465

Query: 520 KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC 579
           KEAL+ +D M    TKPD IT VG+L ACSH+GL E    YF SM   +G+   P+HY C
Sbjct: 466 KEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTC 525

Query: 580 MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMN 639
           MIDLLGR+G+L EA  L+  M  EPD+T+W ALL A R+H + ELG  AA  +FELEP N
Sbjct: 526 MIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPEN 585

Query: 640 AMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLR 699
           A  YV LSN+Y+++GKW DA ++R +M+ RG++K PG SW+E  ++VH F + D  HP +
Sbjct: 586 AGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEK 645

Query: 700 TDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAP 759
             IY+ ++++ + +K+AGYV   +  LH+VEEE KE  L YHSEKLAVA+G+L +P G P
Sbjct: 646 EKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRP 705

Query: 760 IRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           IR+ KNLRVCGDCH A KYISA+  R I+LRDSNRFHHF+ G+CSCGDYW
Sbjct: 706 IRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 191/418 (45%), Gaps = 40/418 (9%)

Query: 34  KPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNET 93
           K A   N  L  +  +G ++EA  LF   ++ D  +WN +++ Y   G++ EA++LF+  
Sbjct: 160 KDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGKMSEARELFDRM 219

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE 153
           P ++  +W+ ++ GY+  G  +EA  LF    +       +T   V+   +  G+L+   
Sbjct: 220 PGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVR----DVFTWTAVVSGYAQNGMLEEAR 275

Query: 154 Q-FHGYAIKTCFDLNAFVVT--------------------------GLVDMYAKCKCIFE 186
           + F     +     NA V                             ++  YA+   + E
Sbjct: 276 RVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEE 335

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A+ +F   P  K+ V+W  M+  YSQ G   + ++ F +M   G   N+  F  +L+ CA
Sbjct: 336 AKAVFDTMPQ-KDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCA 394

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            ++A + G Q+HG ++ +G+    +V +AL+ MY KCG+++ AR   E  E  + VSWN+
Sbjct: 395 DIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNT 454

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKT 365
           MI G+AR GF KEAL +F  M     K DD T   VL  C  S +        +S+    
Sbjct: 455 MIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDF 514

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD----KDVISWTSLITGCAYHGSYE 419
           G          +ID+  + G L  A    +LM+D     D   W +L+     H + E
Sbjct: 515 GVTAKPEHYTCMIDLLGRAGRLAEA---HDLMKDMPFEPDSTMWGALLGASRIHRNPE 569



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 117/449 (26%), Positives = 207/449 (46%), Gaps = 38/449 (8%)

Query: 34  KPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNET 93
           +  S  N  L  +S +G +  A  LF  +   D +++NT++ A A S  L +A+ LF+E 
Sbjct: 67  RSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEM 126

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELF----------WQMQLEGYRP------------ 131
           P ++  T++ +I  ++N+GL   A   F          W   L  Y              
Sbjct: 127 PVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFN 186

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD----LNAFVVTGLVDMYAKCKCIFEA 187
           S+   D +     + G +Q G+       +  FD     +      +V  YA+   + EA
Sbjct: 187 SRTEWDAISWNALMSGYVQWGKMSEA---RELFDRMPGRDVVSWNIMVSGYARRGDMVEA 243

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             LF   P  ++   WT +++GY+QNG   +A   F  M     E N  ++ +++ A   
Sbjct: 244 RRLFDAAPV-RDVFTWTAVVSGYAQNGMLEEARRVFDAM----PERNAVSWNAMVAAYIQ 298

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
               D   ++   +       NV   + ++  YA+ G L+ A+ + +     + VSW +M
Sbjct: 299 RRMMDEAKELFNMMPCR----NVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAM 354

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           +  +++ G  +E L LF +M      ++   +  VL+  A    L     +H  +++ G+
Sbjct: 355 LAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGY 414

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
               FV NAL+ MY K GN++ A   F  M+++DV+SW ++I G A HG  +EAL+ F  
Sbjct: 415 GVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDM 474

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFG 456
           MR +   PD + +  +L+AC+   ++E G
Sbjct: 475 MRTTSTKPDDITLVGVLAACSHSGLVEKG 503



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 165/352 (46%), Gaps = 30/352 (8%)

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
            E  V   +  I  + + G +  A RL       +  ++N+M+ G++  G    A SLF+
Sbjct: 34  LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
            +     + D+++Y ++L+  A +  L +A+ +   +       Y    N +I  +A  G
Sbjct: 94  AIP----RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTY----NVMISSHANHG 145

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
            +  A   F+L  +KD +SW  ++     +G  EEA   F+    S    D +  ++++S
Sbjct: 146 LVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFN----SRTEWDAISWNALMS 201

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
              +   +    +   +F +  G   +S  N +V  YA+ G + +A R+FD+   RDV T
Sbjct: 202 GYVQWGKM---SEARELFDRMPGRDVVSW-NIMVSGYARRGDMVEARRLFDAAPVRDVFT 257

Query: 506 WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMD 565
           WTA++ G AQNG  +EA + +D M  R    + +++  ++ A     + + A+  F  M 
Sbjct: 258 WTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKELFNMM- 312

Query: 566 KVYGIKPGPD--HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
                 P  +   +  M+    ++G L EAKA+ D M  + DA  W A+L+A
Sbjct: 313 ------PCRNVASWNTMLTGYAQAGMLEEAKAVFDTMP-QKDAVSWAAMLAA 357


>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 808

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 284/735 (38%), Positives = 419/735 (57%), Gaps = 9/735 (1%)

Query: 81  GRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVL 140
           G L  A+ LF++ P      +++LI  YS  G  +         +    +P+ YT   VL
Sbjct: 77  GDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVL 136

Query: 141 RLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNH 200
           + CS    L+     H +A +     + FV T LVD+YAKC     A  +F+  P  ++ 
Sbjct: 137 KACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMP-ARDV 195

Query: 201 VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG- 259
           VAW  M+ GY+ +G     I C   M+ +    N  T  ++L   A   A   G  VH  
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACLLLMQ-DDHAPNASTLVALLPLLAQHGALSQGRAVHAY 254

Query: 260 ----CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
               C L    +  V V +AL+DMYAKCG L  A R+ E   + NEV+W++++ GF   G
Sbjct: 255 SVRACSLHD-HKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCG 313

Query: 316 FHKEALSLFKKMHARDIK-IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
              EA SLFK M A+ +  +   +  S L   A+  DL   K +H+L+ K+G        
Sbjct: 314 RMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAG 373

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           N+L+ MYAK G +D A  +F+ M  KD +S+++L++G   +G  +EA + F  M+   + 
Sbjct: 374 NSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQ 433

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           PD   + S++ AC+ L  L+ G+  H   +  G  S  S+ N+L+ +YAKCG I+ + ++
Sbjct: 434 PDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQI 493

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
           FD M  RD+++W  +I G   +G GKEA   +  M  +  +PD +TF+ L+ ACSH+GL 
Sbjct: 494 FDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLV 553

Query: 555 ENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
              + +F  M   YGI P  +HY  M+DLL R G L EA   +  M  + D  VW ALL 
Sbjct: 554 TEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLG 613

Query: 615 ACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
           ACRVH +++LG++ ++ + +L P     +V LSN++S AG++++AA VR + K +G +K 
Sbjct: 614 ACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKS 673

Query: 675 PGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGK 734
           PGCSW+E N  +H FI  DR H   ++IY ++D I++ I + GY  D +F L +VEEE K
Sbjct: 674 PGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNILVDINKLGYRADTSFVLQDVEEEEK 733

Query: 735 EIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNR 794
           E  L YHSEKLA+AFG+LTL +   I + KNLRVCGDCHT +KY++ V  R II+RD+NR
Sbjct: 734 EKALLYHSEKLAIAFGVLTLSEDKTIFVTKNLRVCGDCHTVIKYMTLVRKRAIIVRDANR 793

Query: 795 FHHFKAGNCSCGDYW 809
           FHHFK G CSCGD+W
Sbjct: 794 FHHFKNGQCSCGDFW 808



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 134/479 (27%), Positives = 234/479 (48%), Gaps = 12/479 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F    ++  YA     R A  +F   P ++   W++++ GY+ +G   +       MQ
Sbjct: 163 DLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAGYALHGKYSDTIACLLLMQ 222

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC----FDLNAFVVTGLVDMYAKC 181
            + + P+  TL  +L L +  G L +G   H Y+++ C          V T L+DMYAKC
Sbjct: 223 -DDHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKC 281

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV-ESNQFTFPS 240
             +  A  +F+     +N V W+ ++ G+   G   +A   F+DM  +G+   +  +  S
Sbjct: 282 GHLVYASRVFEAMAV-RNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVAS 340

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
            L ACA +S    G Q+H  +  SG   ++   ++L+ MYAK G +D A  L +   + +
Sbjct: 341 ALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKD 400

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
            VS+++++ G+ + G   EA  +F+KM A +++ D  T  S++   +    L + K  H 
Sbjct: 401 TVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHG 460

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
            ++  G      + NALIDMYAK G +D +  +F++M  +D++SW ++I G   HG  +E
Sbjct: 461 SVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKE 520

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ-VHAVFLKSGGCSSLSVDNSLV 479
           A   F DM+     PD V    ++SAC+   ++  G++  H +  K G    +     +V
Sbjct: 521 ATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMV 580

Query: 480 LVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGK---GKEALQFYDQMLARGT 534
            + A+ G +++A +    M  + DV  W AL+  C  +     GK+      Q+   GT
Sbjct: 581 DLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGT 639



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 131/428 (30%), Positives = 211/428 (49%), Gaps = 21/428 (4%)

Query: 65  RDGFTWNT-MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           +DG    T ++  YA  G L  A ++F     +N  TWS+L+ G+   G  +EAF LF  
Sbjct: 265 KDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKD 324

Query: 124 MQLEGY-RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           M  +G    S  ++ + LR C+    L  G+Q H    K+    +      L+ MYAK  
Sbjct: 325 MLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAG 384

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            I +A  LF      K+ V+++ +++GY QNG   +A   FR M+   V+ +  T  S++
Sbjct: 385 LIDQATTLFDQMVV-KDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLI 443

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
            AC+ ++A   G   HG ++  G  +   + +ALIDMYAKCG +D +R++ +     + V
Sbjct: 444 PACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIV 503

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSL 361
           SWN+MI G+   G  KEA +LF  M  +  + DD T+  +++ C  S +     +  H +
Sbjct: 504 SWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMM 563

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGSYEE 420
             K G          ++D+ A+ G LD A+     M  K DV  W +L+  C  H + + 
Sbjct: 564 AHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDL 623

Query: 421 ALKYFSDMRISGICPD----HVVVSSILSA------CAELTVLEFGQQVHAVFLKSGGCS 470
             K  S M I  + P+     V++S+I SA       AE+ +++  Q     F KS GCS
Sbjct: 624 G-KQVSSM-IQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQG----FKKSPGCS 677

Query: 471 SLSVDNSL 478
            + ++ SL
Sbjct: 678 WIEINGSL 685



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 67/168 (39%), Gaps = 33/168 (19%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           AL+D ++  G ID + Q+F+ M  RD  +WNTMIA Y                       
Sbjct: 476 ALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYG---------------------- 513

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ-FHGYA 159
                     +GL  EA  LF  M+ +   P   T   ++  CS  GL+  G++ FH  A
Sbjct: 514 ---------IHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMA 564

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
            K           G+VD+ A+   + EA    +  P   +   W  ++
Sbjct: 565 HKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALL 612


>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Glycine max]
          Length = 782

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 278/765 (36%), Positives = 417/765 (54%), Gaps = 112/765 (14%)

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG------------------ 197
           H + + + F     ++  L+D Y K   I  A YLF   P                    
Sbjct: 19  HAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYSAAGNI 78

Query: 198 --------------KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
                         ++ V++  MIT +S +  G  A++ F  M+  G   + FTF S+L 
Sbjct: 79  KLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFSSVLG 138

Query: 244 ACAAVSARDFG-AQVHGCILSSGFEANVYVQSALIDMYAKCG------------------ 284
           A + ++  +    Q+H  +   G  +   V +AL+  Y  C                   
Sbjct: 139 ALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAARKLF 198

Query: 285 ------------------------DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEA 320
                                   DL +AR LLE       V+WN+MI G+  +GF++EA
Sbjct: 199 DEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYEEA 258

Query: 321 LSLFKKMHARDIKIDDFTYPSVLNCFASNIDL-NNAKSVHSLIVKTGFEGYKF----VNN 375
             L ++MH+  I++D++TY SV++  ASN  L N  + VH+ +++T  +        VNN
Sbjct: 259 FDLLRRMHSLGIQLDEYTYTSVISA-ASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVNN 317

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC----------------------- 412
           ALI +Y + G L  A  VF+ M  KD++SW ++++GC                       
Sbjct: 318 ALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLLT 377

Query: 413 --------AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
                   A +G  EE LK F+ M++ G+ P     +  +++C+ L  L+ GQQ+H+  +
Sbjct: 378 WTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQII 437

Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ 524
           + G  SSLSV N+L+ +Y++CG +  A+ VF +M   D ++W A+I   AQ+G G +A+Q
Sbjct: 438 QLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQ 497

Query: 525 FYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLL 584
            Y++ML     PD ITF+ +L ACSHAGL +  R YF++M   YGI P  DHY+ +IDLL
Sbjct: 498 LYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLL 557

Query: 585 GRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYV 644
            R+G   EAK + + M  EP A +W+ALL+ C +HG++ELG +AA+ L EL P     Y+
Sbjct: 558 CRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQDGTYI 617

Query: 645 QLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYS 704
            LSNMY+  G+W++ ARVRKLM+ RG++KEPGCSW+E  + VH+F+ +D  HP    +Y 
Sbjct: 618 SLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEVHAVYR 677

Query: 705 KIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFK 764
            +++++  +++ GYVPD  F LH++E E KE  L+ HSEKLAV +G++ LP GA IR+FK
Sbjct: 678 YLEQLVHEMRKLGYVPDTKFVLHDMESEQKEYALSTHSEKLAVVYGIMKLPLGATIRVFK 737

Query: 765 NLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           NLR+CGDCH A KYIS V  R II+RD  RFHHF+ G CSC +YW
Sbjct: 738 NLRICGDCHNAFKYISKVVDREIIVRDRKRFHHFRNGECSCSNYW 782



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 155/606 (25%), Positives = 268/606 (44%), Gaps = 90/606 (14%)

Query: 23  ARYTHNVGNSVKP-ASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSG 81
           A + H + +  KP    +NR +  +  S  I  A  LF+K+   D     TM++AY+ +G
Sbjct: 17  AVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYSAAG 76

Query: 82  RLREAKKLFNETP--FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
            ++ A +LFN TP   ++  +++++I  +S+      A +LF QM+  G+ P  +T  +V
Sbjct: 77  NIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFSSV 136

Query: 140 LRLCSLKGLLQRG-EQFHGYAIKTCFDLNAFVVTGLVDMYAKC-------KCIF--EAEY 189
           L   SL    +   +Q H    K        V+  L+  Y  C        C+    A  
Sbjct: 137 LGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAARK 196

Query: 190 LFKMFPDGKNH--------------------------------VAWTTMITGYSQNGYGF 217
           LF   P G+                                  VAW  MI+GY   G+  
Sbjct: 197 LFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGFYE 256

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN----VYVQ 273
           +A +  R M   G++ +++T+ S+++A +     + G QVH  +L +  + +    + V 
Sbjct: 257 EAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLSVN 316

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS--------------------------- 306
           +ALI +Y +CG L  ARR+ +   + + VSWN+                           
Sbjct: 317 NALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRSLL 376

Query: 307 ----MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
               MI G A+ GF +E L LF +M    ++  D+ Y   +   +    L+N + +HS I
Sbjct: 377 TWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQI 436

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           ++ G +    V NALI MY++ G ++ A  VF  M   D +SW ++I   A HG   +A+
Sbjct: 437 IQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAI 496

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD----NSL 478
           + +  M    I PD +   +ILSAC+   +++ G+     F     C  ++ +    + L
Sbjct: 497 QLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRH---YFDTMRVCYGITPEEDHYSRL 553

Query: 479 VLVYAKCGCINDANRVFDSMHTRD-VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
           + +  + G  ++A  V +SM        W AL+ GC  +G  +  +Q  D++L    + D
Sbjct: 554 IDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQD 613

Query: 538 --YITF 541
             YI+ 
Sbjct: 614 GTYISL 619



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 169/356 (47%), Gaps = 9/356 (2%)

Query: 20  IGPARYTHNVGNSVKPAS----DLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMI 74
           IG   + + +   V+P+      +N AL+  ++  G++ EA ++F+KM  +D  +WN ++
Sbjct: 292 IGRQVHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAIL 351

Query: 75  AAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQY 134
           +   N+ R+ EA  +F E P ++  TW+ +I G +  G   E  +LF QM+LEG  P  Y
Sbjct: 352 SGCVNARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDY 411

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
                +  CS+ G L  G+Q H   I+   D +  V   L+ MY++C  +  A+ +F   
Sbjct: 412 AYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTM 471

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
           P   + V+W  MI   +Q+G+G +AI+ +  M  E +  ++ TF +IL+AC+       G
Sbjct: 472 P-YVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEG 530

Query: 255 AQVHGCI-LSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIVGFA 312
                 + +  G        S LID+  + G    A+ + E    +     W +++ G  
Sbjct: 531 RHYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCW 590

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
             G  +  +    ++    +   D TY S+ N +A+    +    V  L+ + G +
Sbjct: 591 IHGNMELGIQAADRL-LELMPQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVK 645



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 144/599 (24%), Positives = 229/599 (38%), Gaps = 162/599 (27%)

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE----------- 294
           A +S   F   VH  IL+SGF+    + + LID Y K  ++  AR L +           
Sbjct: 7   AQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAAT 66

Query: 295 -----YS-----------------EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI 332
                YS                  I + VS+N+MI  F+       AL LF +M     
Sbjct: 67  TMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGF 126

Query: 333 KIDDFTYPSVLNCFASNID-LNNAKSVHSLIVKTGFEGYKFVNNAL-------------- 377
             D FT+ SVL   +   D   + + +H  + K G      V NAL              
Sbjct: 127 VPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVN 186

Query: 378 ----------------------------IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
                                       I  Y +  +L  A  +   M D   ++W ++I
Sbjct: 187 SCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMI 246

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS--- 466
           +G  + G YEEA      M   GI  D    +S++SA +   +   G+QVHA  L++   
Sbjct: 247 SGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQ 306

Query: 467 -GGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC------------ 513
             G   LSV+N+L+ +Y +CG + +A RVFD M  +D+++W A++ GC            
Sbjct: 307 PSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSI 366

Query: 514 -------------------AQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
                              AQNG G+E L+ ++QM   G +P    + G + +CS  G  
Sbjct: 367 FREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSL 426

Query: 555 ENARW----------------------------YFESMDKVYGIKPGPD--HYACMIDLL 584
           +N +                               E+ D V+   P  D   +  MI  L
Sbjct: 427 DNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAAL 486

Query: 585 GRSGKLIEAKALLDQMVGE---PDATVWKALLSACRVHGDLELGERAANNL---FELEPM 638
            + G  ++A  L ++M+ E   PD   +  +LSAC   G ++ G    + +   + + P 
Sbjct: 487 AQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPE 546

Query: 639 NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCS---------WVETNSQVHI 688
               Y +L ++   AG + +A  V + M       EPG           W+  N ++ I
Sbjct: 547 EDH-YSRLIDLLCRAGMFSEAKNVTESMPF-----EPGAPIWEALLAGCWIHGNMELGI 599



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 104/432 (24%), Positives = 172/432 (39%), Gaps = 94/432 (21%)

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQ------------------------------ 384
           A++VH+ I+ +GF+ +  + N LID Y K                               
Sbjct: 15  ARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYSA 74

Query: 385 -GNLDCAFMVFNL--MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVS 441
            GN+  A  +FN   M  +D +S+ ++IT  ++      AL+ F  M+  G  PD    S
Sbjct: 75  AGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFS 134

Query: 442 SILSACAELTVLEFG-QQVHAVFLKSGGCSSLSVDNSLVLVYAKCG-------CI----- 488
           S+L A + +   E   QQ+H    K G  S  SV N+L+  Y  C        C+     
Sbjct: 135 SVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAAA 194

Query: 489 --------------------------ND----ANRVFDSMHTRDVITWTALIMGCAQNGK 518
                                     ND    A  + + M     + W A+I G    G 
Sbjct: 195 RKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRGF 254

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA 578
            +EA     +M + G + D  T+  ++ A S+AGL    R     + +   ++P   H+ 
Sbjct: 255 YEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTV-VQPS-GHFV 312

Query: 579 -----CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLF 633
                 +I L  R GKL+EA+ + D+M  + D   W A+LS C     +E     AN++F
Sbjct: 313 LSVNNALITLYTRCGKLVEARRVFDKMPVK-DLVSWNAILSGCVNARRIE----EANSIF 367

Query: 634 ELEPMNA-MPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETN--SQVHIFI 690
              P+ + + +  + +  +  G  E+  ++   MK  G+  EP C +      +   +  
Sbjct: 368 REMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGL--EP-CDYAYAGAIASCSVLG 424

Query: 691 SEDRGHPLRTDI 702
           S D G  L + I
Sbjct: 425 SLDNGQQLHSQI 436


>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
 gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
          Length = 924

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 274/747 (36%), Positives = 420/747 (56%), Gaps = 5/747 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM- 124
           D F  N ++  Y   G + EA K+F+  P  N  +W+S+I  +S  G   ++F+L  +M 
Sbjct: 180 DVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEML 239

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
             EG  P   T+  +L +C+ +G +  G   HG A+K        V   +V MY+KC  +
Sbjct: 240 GEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYL 299

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE--SNQFTFPSIL 242
            EA+  F +  + KN V+W TMI+ +S  G   +A    ++M+++G E  +N+ T  ++L
Sbjct: 300 NEAQMSF-VKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVL 358

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
            AC          ++HG      F+ +V + +A I  YAKCG L+SA ++          
Sbjct: 359 PACLDKLQLRSLKELHGYSFRHCFQ-HVELSNAFILAYAKCGALNSAEKVFHGIGDKTVS 417

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SWN++I G A+ G  ++AL L  +M     + D FT  S+L   A    L   K +H  +
Sbjct: 418 SWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYV 477

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           ++ G E   FV  +L+  Y   G    A ++F+ M+DK+++SW ++I+G + +G   E+L
Sbjct: 478 LRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESL 537

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
             F      GI    + + S+  AC++L+ L  G++ H   LK+       V  S++ +Y
Sbjct: 538 ALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMY 597

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
           AK GCI ++ +VFD +  ++V +W A+I+    +G GKEA++ Y++M   G  PD  T++
Sbjct: 598 AKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYI 657

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
           G+L AC HAGL E    YF+ M     I+P  +HYAC+ID+L R+G+L +A  L+++M  
Sbjct: 658 GILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPE 717

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
           E D  +W +LL +CR  G LE+GE+ A  L ELEP  A  YV LSN+Y+  GKW+   RV
Sbjct: 718 EADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRV 777

Query: 663 RKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDM 722
           R++MK  G++K+ GCSW+E   +V+ F+  D   P   +I      +   I E GY P+ 
Sbjct: 778 RQMMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEERISEIGYKPNT 837

Query: 723 NFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAV 782
           +  LH V EE K   L  HSEKLA++FGLL   +G  +RI+KNLR+C DCH A K IS  
Sbjct: 838 SSVLHEVGEEEKIDILRGHSEKLAISFGLLKTTKGTTLRIYKNLRICADCHNAAKLISKA 897

Query: 783 YLRHIILRDSNRFHHFKAGNCSCGDYW 809
             R I++RD+ RFHHF+ G CSC DYW
Sbjct: 898 VEREIVVRDNKRFHHFRDGLCSCCDYW 924



 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 188/638 (29%), Positives = 320/638 (50%), Gaps = 28/638 (4%)

Query: 48  NSGEIDEAGQLFEKMSD----RDGFTWNT-MIAAYANSGRLREAKKLFNETPFKNFFTWS 102
           N  +I+   +L + +SD    R+ +  NT +I  YA  G   +++ +F+    KN   W+
Sbjct: 55  NQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWN 114

Query: 103 SLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIK 161
           +L+ GY+  GL  +  ++F  +  +  ++P  +T  +V++ C     ++ GE  HG  IK
Sbjct: 115 ALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIK 174

Query: 162 TCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIE 221
               L+ FV   LV MY KC  + EA  +F   P+  N V+W +MI  +S+NG+   + +
Sbjct: 175 MGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPE-TNLVSWNSMICAFSENGFSRDSFD 233

Query: 222 CFRDMR-VEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
              +M   EG+  +  T  +IL  CA     D G  +HG  +  G    V V +A++ MY
Sbjct: 234 LLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMY 293

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM--HARDIKIDDFT 338
           +KCG L+ A+     +   N VSWN+MI  F+ +G   EA +L ++M     ++K ++ T
Sbjct: 294 SKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVT 353

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
             +VL      + L + K +H    +  F+  + ++NA I  YAK G L+ A  VF+ + 
Sbjct: 354 ILNVLPACLDKLQLRSLKELHGYSFRHCFQHVE-LSNAFILAYAKCGALNSAEKVFHGIG 412

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
           DK V SW +LI G A +G   +AL     M  SG  PD   +SS+L ACA L  L++G++
Sbjct: 413 DKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKE 472

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK 518
           +H   L++G  +   V  SL+  Y  CG  + A  +FD M  +++++W A+I G +QNG 
Sbjct: 473 IHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGL 532

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACSHAG---LAENARWYFESMDKVYGIKPGPD 575
             E+L  + + L+ G +   I  V +  ACS      L + A  Y      +  ++    
Sbjct: 533 PYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYV-----LKALQTEDA 587

Query: 576 HYAC-MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFE 634
              C +ID+  +SG + E++ + D +  + +   W A++ A  +HG    G+ A      
Sbjct: 588 FVGCSIIDMYAKSGCIKESRKVFDGL-KDKNVASWNAIIVAHGIHGH---GKEAIELYER 643

Query: 635 LEPMNAMP----YVQLSNMYSTAGKWEDAARVRKLMKS 668
           ++ +  MP    Y+ +      AG  E+  +  K M++
Sbjct: 644 MKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQN 681



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 130/418 (31%), Positives = 222/418 (53%), Gaps = 9/418 (2%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV-TGLVDMYAKCKCIFEAEYLFKMFPDG 197
           +L+ C  +  ++ G + H +   +    N +V+ T L+ MYA C    ++  +F    + 
Sbjct: 49  LLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNM-ET 107

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVE-GVESNQFTFPSILTACAAVSARDFGAQ 256
           KN + W  +++GY++NG     ++ F D+  +   + + FTFPS++ AC  +     G  
Sbjct: 108 KNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEV 167

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           +HG ++  G   +V+V +AL+ MY KCG +D A ++ ++    N VSWNSMI  F+  GF
Sbjct: 168 IHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGF 227

Query: 317 HKEALSLFKKMHARDIKIDD-FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
            +++  L  +M   +  + D  T  ++L   A   +++    +H L VK G      VNN
Sbjct: 228 SRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNN 287

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG--I 433
           A++ MY+K G L+ A M F    +K+V+SW ++I+  +  G   EA     +M+I G  +
Sbjct: 288 AMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEM 347

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC-SSLSVDNSLVLVYAKCGCINDAN 492
             + V + ++L AC +   L   +++H    +   C   + + N+ +L YAKCG +N A 
Sbjct: 348 KANEVTILNVLPACLDKLQLRSLKELHGYSFRH--CFQHVELSNAFILAYAKCGALNSAE 405

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           +VF  +  + V +W ALI G AQNG  ++AL    QM   G +PD+ T   LL AC+H
Sbjct: 406 KVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAH 463



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 145/489 (29%), Positives = 238/489 (48%), Gaps = 48/489 (9%)

Query: 39  LNRALV-DFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           +N A+V  +S  G ++EA   F K ++++  +WNTMI+A++  G + EA  L  E     
Sbjct: 285 VNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEM---- 340

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                                    Q+Q E  + ++ T+ NVL  C  K  L+  ++ HG
Sbjct: 341 -------------------------QIQGEEMKANEVTILNVLPACLDKLQLRSLKELHG 375

Query: 158 YAIKTCFD----LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQN 213
           Y+ + CF      NAF++      YAKC  +  AE +F    D K   +W  +I G++QN
Sbjct: 376 YSFRHCFQHVELSNAFILA-----YAKCGALNSAEKVFHGIGD-KTVSSWNALIGGHAQN 429

Query: 214 GYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
           G   KA+     M   G + + FT  S+L ACA + +  +G ++HG +L +G E + +V 
Sbjct: 430 GDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVG 489

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
           ++L+  Y  CG   SAR L +  +  N VSWN+MI G+++ G   E+L+LF+K  +  I+
Sbjct: 490 TSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQ 549

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
             +    SV    +    L   K  H  ++K       FV  ++IDMYAK G +  +  V
Sbjct: 550 SHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKV 609

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           F+ ++DK+V SW ++I     HG  +EA++ +  M+  G  PD      IL AC    ++
Sbjct: 610 FDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLV 669

Query: 454 EFG----QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM-HTRDVITWTA 508
           E G    +++    L       L     L+ + A+ G ++DA R+ + M    D   W++
Sbjct: 670 EEGLKYFKEMQNFNLIE---PKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSS 726

Query: 509 LIMGCAQNG 517
           L+  C   G
Sbjct: 727 LLRSCRTFG 735


>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
 gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
          Length = 808

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 270/718 (37%), Positives = 402/718 (55%), Gaps = 73/718 (10%)

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK-NHVAWTTMITGYSQNGYGFKAIECF 223
           D      T LV  +A    + +A   F   P  + + V    M++ +++      A+  F
Sbjct: 91  DPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVF 150

Query: 224 RDMRVEG-VESNQFTFPSILTACAAVS--ARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
             +   G +  + ++F ++++A   +   A     Q+H  +L SG  A + V +ALI +Y
Sbjct: 151 HALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALY 210

Query: 281 AKC----------------------------------GDLDSARRLLEYSEIDNEVSWNS 306
            KC                                  GD+++AR + E  +   +V WN+
Sbjct: 211 MKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNA 270

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           MI G+ + G   +A  LF++M +  + +D+FT+ SVL+  A+     + KSVH  I++  
Sbjct: 271 MISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQ 330

Query: 367 F----EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTS--------------- 407
                E    VNNAL+ +Y+K G +  A  +F+ M  KDV+SW +               
Sbjct: 331 PNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAV 390

Query: 408 ----------------LITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELT 451
                           +++G  + G  E+ALK F+ MR   + P     +  ++AC EL 
Sbjct: 391 EVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELG 450

Query: 452 VLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIM 511
            L+ G+Q+HA  ++ G  +S S  N+L+ +YAKCG +NDA  VF  M   D ++W A+I 
Sbjct: 451 ALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMIS 510

Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIK 571
              Q+G G+EAL+ +DQM+A G  PD I+F+ +L AC+HAGL +    YFESM + +GI 
Sbjct: 511 ALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGIS 570

Query: 572 PGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANN 631
           PG DHYA +IDLLGRSG++ EA+ L+  M  EP  ++W+A+LS CR +GD+E G  AA+ 
Sbjct: 571 PGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQ 630

Query: 632 LFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFIS 691
           LF + P +   Y+ LSN YS AG+W DAARVRKLM+ RG++KEPGCSW+E  S++H+F+ 
Sbjct: 631 LFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLV 690

Query: 692 EDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGL 751
            D  HP   ++Y  ++ I   +++ GYVPD  F LH++E   KE  L  HSEKLAV FGL
Sbjct: 691 GDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGL 750

Query: 752 LTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           L LP GA + + KNLR+CGDCHTAM ++S    R I++RD  RFHHFK G CSCG+YW
Sbjct: 751 LKLPPGATVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 808



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 150/570 (26%), Positives = 242/570 (42%), Gaps = 95/570 (16%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP--FKNFFTWSS 103
           ++ S ++     LF    D       +++AA+A +GRLR+A   F+  P   ++    ++
Sbjct: 73  YTLSPDLATPAALFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNA 132

Query: 104 LIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT 162
           ++  ++   L   A  +F  +   G  RP  Y         S   L+    Q H  A   
Sbjct: 133 MMSAFARASLAAPAVSVFHALLGSGSLRPDDY---------SFTALISAVGQMHNLAAPH 183

Query: 163 CFDLNAFVV-----------TGLVDMYAKC---KCIFEAEYLFKMFP------------- 195
           C  L+  V+             L+ +Y KC   +  ++A  +    P             
Sbjct: 184 CTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVG 243

Query: 196 -----------------DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTF 238
                            DGK  V W  MI+GY Q+G    A E FR M  E V  ++FTF
Sbjct: 244 YVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTF 303

Query: 239 PSILTACAAVSARDFGAQVHGCI--LSSGF--EANVYVQSALIDMYAKCGDLDSARRLLE 294
            S+L+ACA       G  VHG I  L   F  EA + V +AL+ +Y+K G +  A+R+ +
Sbjct: 304 TSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFD 363

Query: 295 YSEIDNEVSWNS-------------------------------MIVGFARQGFHKEALSL 323
              + + VSWN+                               M+ G+   G  ++AL L
Sbjct: 364 TMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKL 423

Query: 324 FKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK 383
           F +M A D+K  D+TY   +        L + + +H+ +V+ GFE      NAL+ MYAK
Sbjct: 424 FNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAK 483

Query: 384 QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSI 443
            G ++ A +VF +M + D +SW ++I+    HG   EAL+ F  M   GI PD +   +I
Sbjct: 484 CGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTI 543

Query: 444 LSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLVLVYAKCGCINDANRVFDSMHTR 501
           L+AC    +++ G        +  G S    D+   L+ +  + G I +A  +  +M   
Sbjct: 544 LTACNHAGLVDEGFHYFESMKRDFGISP-GEDHYARLIDLLGRSGRIGEARDLIKTMPFE 602

Query: 502 DVIT-WTALIMGCAQNGKGKEALQFYDQML 530
              + W A++ GC  NG  +      DQ+ 
Sbjct: 603 PTPSIWEAILSGCRTNGDMEFGAYAADQLF 632



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 149/283 (52%), Gaps = 4/283 (1%)

Query: 36  ASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP 94
           A  +N ALV  +S  G+I  A ++F+ M+ +D  +WNT+++ Y +SG L +A ++F   P
Sbjct: 338 ALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMP 397

Query: 95  FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ 154
           +KN  +W  ++ GY + GL  +A +LF QM+ E  +P  YT    +  C   G L+ G Q
Sbjct: 398 YKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQ 457

Query: 155 FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
            H + ++  F+ +      L+ MYAKC  + +A  +F + P+  + V+W  MI+   Q+G
Sbjct: 458 LHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPN-LDSVSWNAMISALGQHG 516

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQ 273
           +G +A+E F  M  EG++ ++ +F +ILTAC      D G      +    G        
Sbjct: 517 HGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHY 576

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIVGFARQG 315
           + LID+  + G +  AR L++    +   S W +++ G    G
Sbjct: 577 ARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNG 619


>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
          Length = 755

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 282/770 (36%), Positives = 432/770 (56%), Gaps = 56/770 (7%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N+A+     +G + +A +LF  M  R   T+N M+A Y+ +GRL  A  LF   P  + +
Sbjct: 42  NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNY 101

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           ++++L++  +      +A  LF +M +        T + ++   +  GL+     +   A
Sbjct: 102 SYNTLLHALAVSSSLADARGLFDEMPVR----DSVTYNVMISSHANHGLVSLARHYFDLA 157

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
            +     +A    G++  Y +   + EA  LF    +  + ++W  +++GY Q G   +A
Sbjct: 158 PEK----DAVSWNGMLAAYVRNGRVEEARGLFNSRTEW-DVISWNALMSGYVQWGKMSEA 212

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
            E F  M                        RD    V   I+ SG              
Sbjct: 213 RELFDRM----------------------PGRDV---VSWNIMVSG-------------- 233

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           YA+ GD+  ARRL + + + +  +W +++ G+A+ G  +EA  +F  M  R+      ++
Sbjct: 234 YARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNA----VSW 289

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
            +++  +     ++ AK + +++       +    N ++  YA+ G L+ A  VF+ M  
Sbjct: 290 NAMVAAYIQRRMMDEAKELFNMMPCRNVASW----NTMLTGYAQAGMLEEAKAVFDTMPQ 345

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           KD +SW +++   +  G  EE L+ F +M   G   +    + +LS CA++  LE G Q+
Sbjct: 346 KDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQL 405

Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKG 519
           H   +++G      V N+L+ +Y KCG + DA   F+ M  RDV++W  +I G A++G G
Sbjct: 406 HGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFG 465

Query: 520 KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC 579
           KEAL+ +D M    TKPD IT VG+L ACSH+GL E    YF SM   +G+   P+HY C
Sbjct: 466 KEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTC 525

Query: 580 MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMN 639
           MIDLLGR+G+L EA  L+  M  EPD+T+W ALL A R+H + ELG  AA  +FELEP N
Sbjct: 526 MIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPEN 585

Query: 640 AMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLR 699
           A  YV LSN+Y+++GKW DA ++R +M+ RG++K PG SW+E  ++VH F + D  HP +
Sbjct: 586 AGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEK 645

Query: 700 TDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAP 759
             IY+ ++++ + +K+AGYV   +  LH+VEEE KE  L YHSEKLAVA+G+L +P G P
Sbjct: 646 EKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRP 705

Query: 760 IRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           IR+ KNLRVCGDCH A KYISA+  R I+LRDSNRFHHF+ G+CSCGDYW
Sbjct: 706 IRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 193/445 (43%), Gaps = 61/445 (13%)

Query: 33  VKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE 92
           V+ +   N  +   +N G +  A   F+   ++D  +WN M+AAY  +GR+ EA+ LFN 
Sbjct: 128 VRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNS 187

Query: 93  TPFKNFFTWSSLIYGYSNYGLDIEAFELF----------WQMQLEGY--RPSQYTLDNVL 140
               +  +W++L+ GY  +G   EA ELF          W + + GY  R        + 
Sbjct: 188 RTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLF 247

Query: 141 RLCSLKGLLQRGEQFHGYA-------IKTCFDL----NAFVVTGLVDMYAKCKCIFEAEY 189
               ++ +        GYA        +  FD     NA     +V  Y + + + EA+ 
Sbjct: 248 DAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKE 307

Query: 190 LFKMFP------------------------------DGKNHVAWTTMITGYSQNGYGFKA 219
           LF M P                                K+ V+W  M+  YSQ G   + 
Sbjct: 308 LFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEET 367

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           ++ F +M   G   N+  F  +L+ CA ++A + G Q+HG ++ +G+    +V +AL+ M
Sbjct: 368 LQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAM 427

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           Y KCG+++ AR   E  E  + VSWN+MI G+AR GF KEAL +F  M     K DD T 
Sbjct: 428 YFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITL 487

Query: 340 PSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
             VL  C  S +        +S+    G          +ID+  + G L  A    +LM+
Sbjct: 488 VGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEA---HDLMK 544

Query: 399 D----KDVISWTSLITGCAYHGSYE 419
           D     D   W +L+     H + E
Sbjct: 545 DMPFEPDSTMWGALLGASRIHRNPE 569



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 210/460 (45%), Gaps = 60/460 (13%)

Query: 34  KPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNET 93
           +  S  N  L  +S +G +  A  LF  +   D +++NT++ A A S  L +A+ LF+E 
Sbjct: 67  RSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEM 126

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELF----------WQMQLEGYRPSQYTLDNVLRLC 143
           P ++  T++ +I  ++N+GL   A   F          W   L  Y  +        R+ 
Sbjct: 127 PVRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNG-------RVE 179

Query: 144 SLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAW 203
             +GL            +T +D+ ++    L+  Y +   + EA  LF   P G++ V+W
Sbjct: 180 EARGLFNS---------RTEWDVISW--NALMSGYVQWGKMSEARELFDRMP-GRDVVSW 227

Query: 204 TTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA-----VSARDFGAQVH 258
             M++GY++ G   +A   F    V  V    FT+ ++++  A       + R F A   
Sbjct: 228 NIMVSGYARRGDMVEARRLFDAAPVRDV----FTWTAVVSGYAQNGMLEEARRVFDAMPE 283

Query: 259 GCILSSGFEANVYVQSALIDM----------------------YAKCGDLDSARRLLEYS 296
              +S       Y+Q  ++D                       YA+ G L+ A+ + +  
Sbjct: 284 RNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTM 343

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              + VSW +M+  +++ G  +E L LF +M      ++   +  VL+  A    L    
Sbjct: 344 PQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGM 403

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H  +++ G+    FV NAL+ MY K GN++ A   F  M+++DV+SW ++I G A HG
Sbjct: 404 QLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHG 463

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
             +EAL+ F  MR +   PD + +  +L+AC+   ++E G
Sbjct: 464 FGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKG 503



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 165/352 (46%), Gaps = 30/352 (8%)

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
            E  V   +  I  + + G +  A RL       +  ++N+M+ G++  G    A SLF+
Sbjct: 34  LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
            +     + D+++Y ++L+  A +  L +A+ +   +       Y    N +I  +A  G
Sbjct: 94  AIP----RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTY----NVMISSHANHG 145

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
            +  A   F+L  +KD +SW  ++     +G  EEA   F+    S    D +  ++++S
Sbjct: 146 LVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFN----SRTEWDVISWNALMS 201

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
              +   +    +   +F +  G   +S  N +V  YA+ G + +A R+FD+   RDV T
Sbjct: 202 GYVQWGKM---SEARELFDRMPGRDVVSW-NIMVSGYARRGDMVEARRLFDAAPVRDVFT 257

Query: 506 WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMD 565
           WTA++ G AQNG  +EA + +D M  R    + +++  ++ A     + + A+  F  M 
Sbjct: 258 WTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKELFNMM- 312

Query: 566 KVYGIKPGPD--HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
                 P  +   +  M+    ++G L EAKA+ D M  + DA  W A+L+A
Sbjct: 313 ------PCRNVASWNTMLTGYAQAGMLEEAKAVFDTMP-QKDAVSWAAMLAA 357


>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 265/747 (35%), Positives = 424/747 (56%), Gaps = 9/747 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFK--NFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           F  N +IA YA  G L  A+ LF+    +  +  +W+S+I  +   G  +EA  LF +MQ
Sbjct: 184 FVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQ 243

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G   + YT  + L+ C     ++ G   H   +K+    + +V   L+ MYA C  + 
Sbjct: 244 EVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQME 303

Query: 186 EAEYLFK--MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +AE +FK  +F D    V+W T+++G  QN     AI  F+DM+  G + +Q +  +++ 
Sbjct: 304 DAERVFKSMLFKDC---VSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIA 360

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           A    +    G +VH   +  G ++N+++ ++LIDMY KC  +       EY    + +S
Sbjct: 361 ASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLIS 420

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           W ++I G+A+   H +AL+L +K+    + +D     S+L   +        K +H  ++
Sbjct: 421 WTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVL 480

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K G      + NA++++Y +   +D A  VF  +  KD++SWTS+IT C ++G   EAL+
Sbjct: 481 KGGLADI-LIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALE 539

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            F+ +  + I PD + + S+L A A L+ L+ G+++H   ++ G      + NSLV +YA
Sbjct: 540 LFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYA 599

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           +CG + +A  +F+ +  RD+I WT++I     +G GK+A+  + +M      PD+ITF+ 
Sbjct: 600 RCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLA 659

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           LL+ACSH+GL    + +FE M   Y ++P P+HYAC++DLL RS  L EA   +  M  E
Sbjct: 660 LLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIE 719

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
           P A VW ALL ACR+H + +LGE AA  L +L   N+  YV +SN ++  G+W D   VR
Sbjct: 720 PSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVR 779

Query: 664 KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE-AGYVPDM 722
            +MK   ++K+PGCSW+E  +++H F++ D+ HP   +IY K+ +   L+KE  GY    
Sbjct: 780 SIMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQCNNIYLKLAQFTKLLKEKGGYRAQT 839

Query: 723 NFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAV 782
               H+V EE K   L  HSE+LA+ +GLL   +G  +RI KNLR+C DCH   K  S +
Sbjct: 840 KLVFHDVCEEEKTQMLYGHSERLALGYGLLVTSKGTCLRITKNLRICDDCHAFFKIASEI 899

Query: 783 YLRHIILRDSNRFHHFKAGNCSCGDYW 809
             R +++RD++RFHHF+ G CSCGD+W
Sbjct: 900 SQRTLVVRDASRFHHFERGLCSCGDFW 926



 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 160/576 (27%), Positives = 295/576 (51%), Gaps = 19/576 (3%)

Query: 74  IAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQ 133
           +  Y   G   +A K+F++   +  FTW+++I    + G  +EA EL+ +M++ G     
Sbjct: 89  VHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDA 148

Query: 134 YTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKM 193
           +T   VL+ C      + G + HG A+K  +    FV   L+ MYAKC  +  A  LF  
Sbjct: 149 FTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDS 208

Query: 194 -FPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
              +  + V+W ++I+ +   G   +A+  FR M+  GVESN +TF S L AC   +   
Sbjct: 209 GLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIK 268

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G  +H  IL S    +VYV +ALI MYA CG ++ A R+ +     + VSWN+++ G  
Sbjct: 269 IGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMV 328

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
           +   + +A++ F+ M     K D  +  +++     + +L     VH+  +K G +    
Sbjct: 329 QNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMH 388

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           + N+LIDMY K   +      F  M +KD+ISWT++I G A +  + +AL     +++  
Sbjct: 389 IGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEK 448

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
           +  D +++ SIL AC+ L   +  +++H   LK GG + + + N++V VY +   ++ A 
Sbjct: 449 MDVDPMMIGSILLACSGLKSEKLIKEIHGYVLK-GGLADILIQNAIVNVYGELALVDYAR 507

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
            VF+S++++D+++WT++I  C  NG   EAL+ ++ ++    +PD IT V +L+A +   
Sbjct: 508 HVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALS 567

Query: 553 LAENARWYFESMDKVYGIKPGPDHYA------CMIDLLGRSGKLIEAKALLDQMVGEPDA 606
             +  +       +++G       +        ++D+  R G +  A+ + +  V + D 
Sbjct: 568 SLKKGK-------EIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFN-YVKQRDL 619

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
            +W ++++A  +HG    G+ A +   ++   N +P
Sbjct: 620 ILWTSMINANGMHG---CGKDAIDLFSKMTDENVLP 652



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 181/585 (30%), Positives = 279/585 (47%), Gaps = 53/585 (9%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA-FVVTGLVDMYAKCKCIFEAEY 189
           P Q      L LC+    L +G+Q H + +KT   L++ F+ T  V MY KC   ++A  
Sbjct: 44  PLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVK 103

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +F    + +    W  MI      G   +AIE +++MRV GV  + FTFP +L AC A  
Sbjct: 104 VFDKMSE-RTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFK 162

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS--EIDNEVSWNSM 307
            R  G ++HG  +  G+   V+V +ALI MYAKCGDL  AR L +    E D+ VSWNS+
Sbjct: 163 ERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSI 222

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I     +G   EALSLF++M    ++ + +T+ S L        +   + +H++I+K+  
Sbjct: 223 ISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNH 282

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
               +V+NALI MYA  G ++ A  VF  M  KD +SW +L++G   +  Y +A+ +F D
Sbjct: 283 FTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQD 342

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           M+ SG  PD V V ++++A      L  G +VHA  +K G  S++ + NSL+ +Y KC C
Sbjct: 343 MQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCC 402

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           +      F+ M  +D+I+WT +I G AQN    +AL    ++       D +    +L A
Sbjct: 403 VKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLA 462

Query: 548 CS----------------------------------HAGLAENARWYFESMDKVYGIKPG 573
           CS                                     L + AR  FES++    +   
Sbjct: 463 CSGLKSEKLIKEIHGYVLKGGLADILIQNAIVNVYGELALVDYARHVFESINSKDIVS-- 520

Query: 574 PDHYACMIDLLGRSGKLIEAKALLDQMVG---EPDATVWKALLSACRVHGDLELGERAAN 630
              +  MI     +G  IEA  L + ++    EPD     ++L A      L+ G+    
Sbjct: 521 ---WTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHG 577

Query: 631 NL----FELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
            L    F LE + A   V   +MY+  G  E+A  +   +K R +
Sbjct: 578 FLIRKGFFLEGLIANSLV---DMYARCGTMENARNIFNYVKQRDL 619



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 124/393 (31%), Positives = 211/393 (53%), Gaps = 2/393 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +  N +IA YAN G++ +A+++F    FK+  +W++L+ G     +  +A   F  MQ
Sbjct: 285 DVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQ 344

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G +P Q ++ N++        L  G + H YAIK   D N  +   L+DMY KC C+ 
Sbjct: 345 DSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVK 404

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
                F+  P+ K+ ++WTT+I GY+QN     A+   R +++E ++ +     SIL AC
Sbjct: 405 YMGSAFEYMPE-KDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLAC 463

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           + + +     ++HG +L  G  A++ +Q+A++++Y +   +D AR + E     + VSW 
Sbjct: 464 SGLKSEKLIKEIHGYVLKGGL-ADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWT 522

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           SMI      G   EAL LF  +   +I+ D  T  SVL   A+   L   K +H  +++ 
Sbjct: 523 SMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRK 582

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           GF     + N+L+DMYA+ G ++ A  +FN ++ +D+I WTS+I     HG  ++A+  F
Sbjct: 583 GFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLF 642

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
           S M    + PDH+   ++L AC+   ++  G+Q
Sbjct: 643 SKMTDENVLPDHITFLALLYACSHSGLVVEGKQ 675



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 6/169 (3%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           +G   N+++  YA  G +  A+ +FN    ++   W+S+I     +G   +A +LF +M 
Sbjct: 587 EGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMT 646

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV--VTGLVDMYAKCKC 183
            E   P   T   +L  CS  GL+  G+Q H   +K  + L  +      LVD+ A+   
Sbjct: 647 DENVLPDHITFLALLYACSHSGLVVEGKQ-HFEIMKNEYKLEPWPEHYACLVDLLARSNS 705

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITG---YSQNGYGFKAIECFRDMRVE 229
           + EA +  +  P   +   W  ++     +S N  G  A +    +  E
Sbjct: 706 LEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTE 754


>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 736

 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 272/696 (39%), Positives = 389/696 (55%), Gaps = 40/696 (5%)

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP----DGKNHVAWTTMIT 208
           +Q H   IK+      F  + L++  A      +  Y   +F        N   W T+I 
Sbjct: 42  KQIHSLIIKSGLHNTLFAQSKLIEFCALSPS-RDLSYALSLFHSIHHQPPNIFIWNTLIR 100

Query: 209 GYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEA 268
            +S       ++  F  M   G+  N  TFPS+  +CA   A     Q+H   L      
Sbjct: 101 AHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHL 160

Query: 269 NVYVQSALIDMYAKCGDL-------------------------------DSARRLLEYSE 297
           + +V ++LI MY++ G+L                               D ARRL +   
Sbjct: 161 HPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIP 220

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
             + VSWN+MI G+ + G  +EAL+ F +M   D+  +  T  SVL+       L   K 
Sbjct: 221 AKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKW 280

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           + S +   GF     + NAL+DMY+K G +  A  +F+ M+DKDVI W ++I G  +   
Sbjct: 281 IGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSL 340

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK----SGGCSSLS 473
           YEEAL  F  M    + P+ V   ++L ACA L  L+ G+ VHA   K    +G  +++S
Sbjct: 341 YEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVS 400

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
           +  S++++YAKCGC+  A +VF SM +R + +W A+I G A NG  + AL  +++M+  G
Sbjct: 401 LWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEG 460

Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
            +PD ITFVG+L AC+ AG  E    YF SM+K YGI P   HY CMIDLL RSGK  EA
Sbjct: 461 FQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEA 520

Query: 594 KALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTA 653
           K L+  M  EPD  +W +LL+ACR+HG +E GE  A  LFELEP N+  YV LSN+Y+ A
Sbjct: 521 KVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGA 580

Query: 654 GKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLI 713
           G+W+D A++R  +  +G++K PGC+ +E +  VH F+  D+ HP   +I+  +DE+  L+
Sbjct: 581 GRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVDRLL 640

Query: 714 KEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCH 773
           +E G+VPD +  L++++EE KE  L  HSEKLA+AFGL++   G+ IRI KNLRVC +CH
Sbjct: 641 EETGFVPDTSEVLYDMDEEWKEGALTQHSEKLAIAFGLISTKPGSTIRIVKNLRVCRNCH 700

Query: 774 TAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +A K IS ++ R II RD NRFHHFK G CSC D W
Sbjct: 701 SATKLISKIFNREIIARDRNRFHHFKDGFCSCNDRW 736



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 142/483 (29%), Positives = 232/483 (48%), Gaps = 42/483 (8%)

Query: 76  AYANSGRLREAKKLFNETPFK--NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQ 133
           A + S  L  A  LF+    +  N F W++LI  +S       +  LF QM   G  P+ 
Sbjct: 68  ALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNS 127

Query: 134 YTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK------CKCIFE- 186
           +T  ++ + C+        +Q H +A+K    L+  V T L+ MY++       + +F+ 
Sbjct: 128 HTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDK 187

Query: 187 ------------------------AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIEC 222
                                   A  LF   P  K+ V+W  MI GY Q+G   +A+ C
Sbjct: 188 STLRDAVSFTALITGYVSEGHVDDARRLFDEIP-AKDVVSWNAMIAGYVQSGRFEEALAC 246

Query: 223 FRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK 282
           F  M+   V  NQ T  S+L+AC  + + + G  +   +   GF  N+ + +AL+DMY+K
Sbjct: 247 FTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSK 306

Query: 283 CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
           CG++ +AR+L +  E  + + WN+MI G+     ++EAL LF+ M   ++  +D T+ +V
Sbjct: 307 CGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAV 366

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN-----ALIDMYAKQGNLDCAFMVFNLM 397
           L   AS   L+  K VH+ I K   +G   VNN     ++I MYAK G ++ A  VF  M
Sbjct: 367 LPACASLGALDLGKWVHAYIDKN-LKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSM 425

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
             + + SW ++I+G A +G  E AL  F +M   G  PD +    +LSAC +   +E G 
Sbjct: 426 GSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGH 485

Query: 458 QVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQ 515
           +  +   K  G S  L     ++ + A+ G  ++A  +  +M    D   W +L+  C  
Sbjct: 486 RYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRI 545

Query: 516 NGK 518
           +G+
Sbjct: 546 HGQ 548



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 176/395 (44%), Gaps = 38/395 (9%)

Query: 31  NSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF 90
           ++++ A      +  + + G +D+A +LF+++  +D  +WN MIA Y  SGR        
Sbjct: 188 STLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFE------ 241

Query: 91  NETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQ 150
                                    EA   F +MQ     P+Q T+ +VL  C     L+
Sbjct: 242 -------------------------EALACFTRMQEADVSPNQSTMVSVLSACGHLRSLE 276

Query: 151 RGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
            G+    +     F  N  +V  LVDMY+KC  I  A  LF    D K+ + W TMI GY
Sbjct: 277 LGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMED-KDVILWNTMIGGY 335

Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI----LSSGF 266
                  +A+  F  M  E V  N  TF ++L ACA++ A D G  VH  I      +G 
Sbjct: 336 CHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGN 395

Query: 267 EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK 326
             NV + +++I MYAKCG ++ A ++       +  SWN+MI G A  G  + AL LF++
Sbjct: 396 VNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEE 455

Query: 327 MHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           M     + DD T+  VL+ C  +       +   S+    G          +ID+ A+ G
Sbjct: 456 MINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSG 515

Query: 386 NLDCA-FMVFNLMQDKDVISWTSLITGCAYHGSYE 419
             D A  ++ N+  + D   W SL+  C  HG  E
Sbjct: 516 KFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVE 550



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 130/306 (42%), Gaps = 37/306 (12%)

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYA--KQGNLDCAFMVFNLM--Q 398
           LN  A   D+ + K +HSLI+K+G     F  + LI+  A     +L  A  +F+ +  Q
Sbjct: 29  LNLLAKCPDIPSLKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQ 88

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
             ++  W +LI   +   +   +L  FS M  SG+ P+     S+  +CA+       +Q
Sbjct: 89  PPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQ 148

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIM------- 511
           +HA  LK        V  SL+ +Y++ G +  A  VFD    RD +++TALI        
Sbjct: 149 LHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGH 208

Query: 512 ------------------------GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
                                   G  Q+G+ +EAL  + +M      P+  T V +L A
Sbjct: 209 VDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSA 268

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
           C H    E  +W   S  +  G          ++D+  + G++  A+ L D M  + D  
Sbjct: 269 CGHLRSLELGKW-IGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGM-EDKDVI 326

Query: 608 VWKALL 613
           +W  ++
Sbjct: 327 LWNTMI 332


>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 285/780 (36%), Positives = 415/780 (53%), Gaps = 110/780 (14%)

Query: 140 LRLCSLK--GLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           L+LCS +           H + I + F      +  L++MY K   +  A  LF+  P+ 
Sbjct: 18  LQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNP 77

Query: 198 --------------------------------KNHVAWTTMITGYSQNGYGFKAIECFRD 225
                                           ++ V +  MITGY+ NG G  A+E FR 
Sbjct: 78  DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137

Query: 226 MRVEGVESNQFTFPSILTACAA-VSARDFGAQVH--------GCILSSGFEA--NVYVQS 274
           MR +    + FTF S+L+A    V       Q+H        GC+ SS   A  +VYV+ 
Sbjct: 138 MRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKR 197

Query: 275 A------------------------------LIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           A                              +I  Y +  DL+ AR + E    +   +W
Sbjct: 198 ASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAW 257

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N+MI G+   G  +EAL+L +KM    I+ DD TY ++++  A+       K +H+ I+K
Sbjct: 258 NAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILK 317

Query: 365 TGFE-GYKF---VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW--------------- 405
                 + F   V+NALI +Y K   +D A  +F  M  +++I+W               
Sbjct: 318 NELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEE 377

Query: 406 ----------------TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE 449
                           T +I+G A +G  +E LK F  MR+ G  P     +  L+AC+ 
Sbjct: 378 AKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSV 437

Query: 450 LTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTAL 509
           L  LE G+Q+HA  +  G  SSLSV N+++ +YAKCG +  A  VF +M + D+++W ++
Sbjct: 438 LGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSM 497

Query: 510 IMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG 569
           I    Q+G G +A++ +DQML  G  PD ITF+ +L ACSHAGL E  R YF SM + YG
Sbjct: 498 IAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYG 557

Query: 570 IKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAA 629
           I P  DHYA M+DL  R+G    A+ ++D M  +P A VW+ALL+ CR+HG+++LG  AA
Sbjct: 558 ITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAA 617

Query: 630 NNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIF 689
             LF+L P N   YV LSN+Y+  G+W D A+VRKLM+ + +RKEP CSW+E  ++VH+F
Sbjct: 618 EQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHVF 677

Query: 690 ISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAF 749
           + +D  HP    +Y  ++++ L +K+ GY+PD  F LH++E E KE  L+ HSEKLAV F
Sbjct: 678 MVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGF 737

Query: 750 GLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           G++ LP  A +R+FKN+R+CGDCH A K++S V  R II+RD  RFHHFK G+CSC DYW
Sbjct: 738 GIMKLPPDATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 164/592 (27%), Positives = 268/592 (45%), Gaps = 82/592 (13%)

Query: 20  IGPARYTHNVGNSVKPASD-LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYA 78
           +  A + H + +  KP    LNR L  +  S  +  A QLFE++ + D     T+I AY 
Sbjct: 31  LARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITAYC 90

Query: 79  NSGRLREAKKLFNETPF--KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
             G L   +++FN TP   ++   ++++I GY++ G    A ELF  M+ + +RP  +T 
Sbjct: 91  ALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTF 150

Query: 137 DNVLR-LCSLKGLLQRGEQFHGYAIKTCFD-LNAFVVTGLVDMYAK--------CKCIFE 186
            +VL  L    G  Q+  Q H   +KT    +++ V+  L+ +Y K        C  +  
Sbjct: 151 TSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVS 210

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNG------------------------YGFKAIEC 222
           A  LF   P  ++ + WTTMITGY +N                          G+    C
Sbjct: 211 ARKLFDEMPK-RDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHCGC 269

Query: 223 F-------RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN----VY 271
           F       R MR  G++ +  T+ +I++ACA V +   G Q+H  IL +    N    + 
Sbjct: 270 FQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLS 329

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS------------------------- 306
           V +ALI +Y K   +D AR++     + N ++WN+                         
Sbjct: 330 VSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKN 389

Query: 307 ------MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
                 MI G A+ GF  E L LFK+M     +  DF +   L   +    L N + +H+
Sbjct: 390 LLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHA 449

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
            +V  G+E    V NA+I MYAK G ++ A  VF  M   D++SW S+I     HG   +
Sbjct: 450 QLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVK 509

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LV 479
           A++ F  M   G+ PD +   ++L+AC+   ++E G+      L+S G +      + +V
Sbjct: 510 AIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMV 569

Query: 480 LVYAKCGCINDANRVFDSMHTRD-VITWTALIMGCAQNGKGKEALQFYDQML 530
            ++ + G  + A  V DSM ++     W AL+ GC  +G     ++  +Q+ 
Sbjct: 570 DLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLF 621



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 159/329 (48%), Gaps = 12/329 (3%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  +  + ++DEA ++F  M  R+  TWN +++ Y N+GR+ EAK  F E P KN  
Sbjct: 332 NALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLL 391

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           T + +I G +  G   E  +LF QM+L+G+ P  +     L  CS+ G L+ G Q H   
Sbjct: 392 TLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQL 451

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           +   ++ +  V   ++ MYAKC  +  AE +F   P   + V+W +MI    Q+G+G KA
Sbjct: 452 VHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMP-SVDLVSWNSMIAALGQHGHGVKA 510

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALID 278
           IE F  M  EGV  ++ TF ++LTAC+     + G      +L S G        + ++D
Sbjct: 511 IELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVD 570

Query: 279 MYAKCGDLDSARRLLE-YSEIDNEVSWNSMIVGFARQGFH----KEALSLFKKMHARDIK 333
           ++ + G    AR +++          W +++ G    G      + A  LFK M      
Sbjct: 571 LFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQ---- 626

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
            +D TY  + N +A     N+   V  L+
Sbjct: 627 -NDGTYVLLSNIYADVGRWNDVAKVRKLM 654


>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
 gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
          Length = 660

 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 264/660 (40%), Positives = 396/660 (60%), Gaps = 7/660 (1%)

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYA--KCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
           +Q H   ++T    + F  + +V   +  +   +  A  +F   P+  ++    ++I G 
Sbjct: 5   KQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTC-NSIIRGC 63

Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV 270
           +      +A+  +++M V+G+  +++TFPS+  +C   S    G Q+H      GF ++ 
Sbjct: 64  TDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTKLGFASDT 120

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM-HA 329
           Y Q+ L++MY+ CG L SAR++ +  E    VSW +MI   A+     EA+ LF +M  +
Sbjct: 121 YAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKS 180

Query: 330 RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDC 389
            ++K ++ T  +VL   A   DL   K +H  I + GF  +  +N  L+D+Y K G +  
Sbjct: 181 ENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQL 240

Query: 390 AFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE 449
           A  +F+  Q+K++ SW  +I G     +YEEAL  F +M+  GI  D V ++S+L AC  
Sbjct: 241 ARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTH 300

Query: 450 LTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTAL 509
           L  LE G+ +HA   K      +++  +LV +YAKCG I  A +VF  M  +DV+TWTAL
Sbjct: 301 LGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTAL 360

Query: 510 IMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG 569
           I+G A  G+ + ALQ++D+M  +G KPD ITFVG+L ACSHAG  +    +F SM   YG
Sbjct: 361 ILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYG 420

Query: 570 IKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAA 629
           I+P  +HY  ++D+LGR+G++ EA+ L+  M   PD  V   LL ACR+HG+LE  ERAA
Sbjct: 421 IQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAA 480

Query: 630 NNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIF 689
             L E++P ++  YV LSN+Y ++ KWE+A R R+LM  RG+RK PGCS +E +  VH F
Sbjct: 481 KQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHGVVHEF 540

Query: 690 ISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAF 749
           +  D  H   ++I   +++++  +K AGYVPD +  L ++ EE KE  L+ HSEKLA+AF
Sbjct: 541 VKGDSSHRQSSEINEMLEDMISKLKNAGYVPDKSEVLFDMAEEEKETELSLHSEKLAIAF 600

Query: 750 GLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           GLL+   G PIR+ KNLR+C DCH+A K IS +Y R II+RD NRFHHFK G CSC  +W
Sbjct: 601 GLLSTSVGTPIRVVKNLRICSDCHSATKLISKLYNREIIVRDRNRFHHFKDGTCSCRGFW 660



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 148/472 (31%), Positives = 243/472 (51%), Gaps = 13/472 (2%)

Query: 66  DGFTWNTMIA--AYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D FT + ++A  +   SG L+ A+ +F++ P    +T +S+I G ++  L  EA   + +
Sbjct: 19  DPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCTDKNLHQEALLFYQE 78

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M ++G  P +YT  ++ + C        G+Q H ++ K  F  + +    L++MY+ C C
Sbjct: 79  MMVQGLIPDRYTFPSLFKSCRNSS---EGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGC 135

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF-RDMRVEGVESNQFTFPSIL 242
           +  A  +F    D K  V+W TMI  ++Q     +A+  F R M+ E V+ N+ T  ++L
Sbjct: 136 LVSARKVFDKMED-KTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVL 194

Query: 243 TACAAVSARDFG--AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           TACA   ARD     ++H  I   GF  +V + + L+D+Y KCG +  AR L + ++  N
Sbjct: 195 TACA--RARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKN 252

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
             SWN MI G      ++EAL LF++M  + IK D  T  S+L        L   K +H+
Sbjct: 253 LFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHA 312

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
            I K   +    +  AL+DMYAK G+++ A  VF+ M +KDV++WT+LI G A  G  E 
Sbjct: 313 YIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAEN 372

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG-QQVHAVFLKSGGCSSLSVDNSLV 479
           AL+YF +M I G+ PD +    +L+AC+    ++ G    +++    G   ++     LV
Sbjct: 373 ALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLV 432

Query: 480 LVYAKCGCINDANRVFDSM-HTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
            +  + G I +A  +  SM    D      L+  C  +G  + A +   Q+L
Sbjct: 433 DILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQLL 484



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 152/316 (48%), Gaps = 19/316 (6%)

Query: 64  DRDGF----TWNTMIA-AYANSGRLREAKKLFNETPFKNFFTWSSLIYGY---SNYGLDI 115
           D  GF      NT++   Y   G ++ A+ LF++   KN F+W+ +I G+   SNY    
Sbjct: 214 DEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYE--- 270

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  LF +MQ +G +  + T+ ++L  C+  G L+ G+  H Y  K   D++  + T LV
Sbjct: 271 EALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALV 330

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMYAKC  I  A  +F   P+ K+ + WT +I G +  G    A++ F +M ++GV+ + 
Sbjct: 331 DMYAKCGSIETAIQVFHEMPE-KDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDA 389

Query: 236 FTFPSILTACAAVSARDFG-AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
            TF  +L AC+     D G +  +    + G +  +     L+D+  + G +  A  L++
Sbjct: 390 ITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIK 449

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF---TYPSVLNCFASNID 351
              +  +      ++G  R   + EA     K   + ++ID +   TY  + N + S+  
Sbjct: 450 SMPMAPDQFVLGGLLGACRIHGNLEAAERAAK---QLLEIDPYHSGTYVLLSNIYKSSKK 506

Query: 352 LNNAKSVHSLIVKTGF 367
              AK    L+ + G 
Sbjct: 507 WEEAKRTRELMAERGM 522



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 64/160 (40%), Gaps = 35/160 (21%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           L  ALVD ++  G I+ A Q+F +M ++D  TW  +I   A  G+   A + F+E     
Sbjct: 325 LGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDE----- 379

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                                     M ++G +P   T   VL  CS  G +  G   H 
Sbjct: 380 --------------------------MHIKGVKPDAITFVGVLAACSHAGFVDEGIS-HF 412

Query: 158 YAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFP 195
            ++   + +   +    GLVD+  +   I EAE L K  P
Sbjct: 413 NSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMP 452


>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 944

 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 271/752 (36%), Positives = 427/752 (56%), Gaps = 6/752 (0%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  + D    G++  A +++++M  ++  + NTMI+ Y   G L  A+ LF+  P +   
Sbjct: 48  NFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVV 107

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           TW+ L+  Y+      EAF+LF QM      P   T   +L  C+         Q H +A
Sbjct: 108 TWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFA 167

Query: 160 IKTCFDLNAF--VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
           +K  FD N F  V   L+  Y + + +  A  LF+   D K+ V + T+ITGY ++G   
Sbjct: 168 VKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILD-KDSVTFNTLITGYEKDGLYT 226

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           +AI  F  MR  G + + FTF  +L A   +     G Q+HG  +++GF  +  V + ++
Sbjct: 227 EAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQIL 286

Query: 278 DMYAKCGDLDSARRLL-EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
             Y+K   +   R L  E  E+D  VS+N +I  +++   ++E+L+LF++M        +
Sbjct: 287 HFYSKHDRVLETRNLFNEMPELDF-VSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRN 345

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
           F + ++L+  A+   L   + VH   +    +    V N+L+DMYAK    D A ++F  
Sbjct: 346 FPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKS 405

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
           +  +  +SWT+LI+G    G +   LK F+ MR + +  D    +++L A A    L  G
Sbjct: 406 LSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLG 465

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
           +Q+HA  ++SG   ++   + LV +YAKCG I DA +VF+ M  R+ ++W ALI   A N
Sbjct: 466 KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADN 525

Query: 517 GKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH 576
           G G+ A+  + +M+  G +PD ++ +G+L ACSH G  E    +F++M  +YGI P   H
Sbjct: 526 GDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKH 585

Query: 577 YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELE 636
           YACM+DLLGR+G+  EA+ L+D+M  EPD  +W ++L+ACR++ +  L ERAA  LF +E
Sbjct: 586 YACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSME 645

Query: 637 PM-NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG 695
            + +A  YV +SN+Y+ AGKWE+   V+K M+ RGI+K P  SWVE N ++H+F S D+ 
Sbjct: 646 KLRDAAAYVSMSNIYAAAGKWENVRHVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQT 705

Query: 696 HPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLP 755
           HP   +I  KI+E+   I+  GY PD +  + +++E+ K   L YHSE+LAVAF L++ P
Sbjct: 706 HPNGDEIVKKINELTTEIEREGYKPDTSSVVQDIDEQMKIESLKYHSERLAVAFALISTP 765

Query: 756 QGAPIRIFKNLRVCGDCHTAMKYISAVYLRHI 787
           +G PI + KNLR C DCH A+K IS +  R I
Sbjct: 766 EGCPIVVMKNLRACRDCHAAIKLISKIVKRVI 797


>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 262/685 (38%), Positives = 408/685 (59%), Gaps = 11/685 (1%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT--CFDLNAFVVTGLVDMYAKCKCIFEAE 188
           P ++T+  +L++ +    L+ G+  H + I T      N   V  L+++YAKC  I  A 
Sbjct: 24  PLEHTI-QLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVAR 82

Query: 189 YLFKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILTA 244
            LF    DG   +N V+W  ++ GY  NG   + +  F+ M  V+ +  N++ F +I+++
Sbjct: 83  ILF----DGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISS 138

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C+       G Q HG  L SG   + YV++ALI MY++  D+  A  +       +  S+
Sbjct: 139 CSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSY 198

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N +I G    G+  EAL +  +M    I  D+ TY +     +   DL     VH  + +
Sbjct: 199 NIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFR 258

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
           TG E   FV++A+IDMY K GN+  A  VFN +Q K+V+SWT+++   + +G +EEAL +
Sbjct: 259 TGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNF 318

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           F +M + G+ P+    + +L++CA ++ L  G+ +H    KSG    + V N+L+ +Y+K
Sbjct: 319 FPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSK 378

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
            G I  A++VF  M  RD ITW+A+I G + +G G+EAL  + +MLA    P Y+TFVG+
Sbjct: 379 SGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGV 438

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L AC+H G  +   +Y   + K  GI+PG +HY C++ LL ++G+L EA+  +     + 
Sbjct: 439 LSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKW 498

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
           D   W+ LLSAC VH +  LG++ A  + +++P +   Y+ LSNMY+ A +W+   ++RK
Sbjct: 499 DVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVKIRK 558

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
           LM+ R ++KEPG SW+E  + +H+F+SE + HP    IY K+ E++ +I+  GYVPD+  
Sbjct: 559 LMRERNVKKEPGASWIEIRNSIHVFVSEGKTHPESNQIYEKVQELLTMIRPMGYVPDIAA 618

Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
             H+VE+E K   ++YHSEKLA+A+GL+  P GAPIR+ KNLR+C DCH+A+K IS V  
Sbjct: 619 VFHDVEDEQKREYVSYHSEKLAIAYGLMKTPSGAPIRVIKNLRMCVDCHSAVKLISKVTN 678

Query: 785 RHIILRDSNRFHHFKAGNCSCGDYW 809
           R II+RD+NRFH F  G CSC DYW
Sbjct: 679 RMIIVRDANRFHCFGDGGCSCADYW 703



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 151/511 (29%), Positives = 263/511 (51%), Gaps = 10/511 (1%)

Query: 28  NVGNSVKPASDLNRALVDFSNS--GEIDEAGQLFEKMSDRDGFTW-NTMIAAYANSGRLR 84
            VG+ ++    L +   D  N   G++  A  +    + +D     N++I  YA   ++ 
Sbjct: 20  TVGHPLEHTIQLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIM 79

Query: 85  EAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQYTLDNVLRLC 143
            A+ LF+    +N  +W +L+ GY + GL +E   LF  M  ++  RP++Y    ++  C
Sbjct: 80  VARILFDGMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSC 139

Query: 144 SLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAW 203
           S  G +  G Q HGYA+K+    + +V   L+ MY++   +  A  ++   P G +  ++
Sbjct: 140 SDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVP-GLDVFSY 198

Query: 204 TTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS 263
             +I G  +NGY  +A+E    M  E +  +  T+ +    C+ +     G QVH  +  
Sbjct: 199 NIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFR 258

Query: 264 SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSL 323
           +G E + +V SA+IDMY KCG++ +AR++    +  N VSW +++  +++ G  +EAL+ 
Sbjct: 259 TGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNF 318

Query: 324 FKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK 383
           F +M    +  +++T+  +LN  A    L + K +H+ I K+GFE +  V NALI+MY+K
Sbjct: 319 FPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSK 378

Query: 384 QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSI 443
            G+++ A  VF  M  +D I+W+++I G ++HG   EAL  F +M  +  CP +V    +
Sbjct: 379 SGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGV 438

Query: 444 LSACAELTVLEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDSMHTR- 501
           LSACA L  ++ G       +K  G    +     +V +  K G +++A     S   + 
Sbjct: 439 LSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKW 498

Query: 502 DVITWTALIMGC--AQN-GKGKEALQFYDQM 529
           DV+ W  L+  C   QN G GK+  +   QM
Sbjct: 499 DVVAWRTLLSACHVHQNYGLGKKVAELVLQM 529



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 136/281 (48%), Gaps = 6/281 (2%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
           ++F   ++ D F  + +I  Y   G +  A+K+FN    KN  +W++++  YS  G   E
Sbjct: 255 RMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEE 314

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
           A   F +M+++G  P++YT   +L  C+    L  G+  H    K+ F+ +  V   L++
Sbjct: 315 ALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALIN 374

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           MY+K   I  A  +F +    ++ + W+ MI G S +G G +A+  F++M       +  
Sbjct: 375 MYSKSGSIEAAHKVF-LEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYV 433

Query: 237 TFPSILTACAAVSARDFG-AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
           TF  +L+ACA + +   G   ++  +  +G E  V   + ++ +  K G LD A   ++ 
Sbjct: 434 TFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKS 493

Query: 296 SEID-NEVSWNSMIVG---FARQGFHKEALSLFKKMHARDI 332
           + +  + V+W +++         G  K+   L  +M   D+
Sbjct: 494 TPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDV 534


>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 267/673 (39%), Positives = 393/673 (58%), Gaps = 6/673 (0%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP--D 196
           +L+ C     LQ   Q H + +KT   L+  +   +++  A        +Y   +F   D
Sbjct: 27  ILQQCKTPKDLQ---QVHAHLLKTRRLLDPIITEAVLE-SAALLLPDTIDYALSIFNHID 82

Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
                A+  MI G +       A+  F+ M  + V+ ++FTF S+L AC+ + A   G Q
Sbjct: 83  KPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQ 142

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           VH  IL SGF++N +V++ LI MYA CG +  AR + +     + V+WNSM+ G+ + G 
Sbjct: 143 VHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGL 202

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
             E + LF+K+    I+ DD T  SVL       +L   + +   IV  G      +  +
Sbjct: 203 WDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTS 262

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           LIDMYAK G +D A  +F+ M  +DV++W+++I+G A     +EAL  F +M+   + P+
Sbjct: 263 LIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPN 322

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFD 496
            V + S+L +CA L   E G+ VH    K     ++++   L+  YAKCG I+ +  VF 
Sbjct: 323 EVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFK 382

Query: 497 SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAEN 556
            M  ++V TWTALI G A NG+GK AL+F+  ML    KP+ +TF+G+L ACSHA L + 
Sbjct: 383 EMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQ 442

Query: 557 ARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSAC 616
            R  F SM + + I+P  +HY CM+D+LGR+G L EA   +D M   P+A VW+ LL++C
Sbjct: 443 GRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASC 502

Query: 617 RVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPG 676
           R H ++E+ E++  ++  LEP ++  Y+ LSN Y+  G+ EDA RVR L+K + I+K PG
Sbjct: 503 RAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPG 562

Query: 677 CSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEI 736
           CS +E +  VH F SED  H    +I+  +D++M  IK  GYVP+ + A    EEE KE 
Sbjct: 563 CSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTDDARLEAEEESKET 622

Query: 737 GLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFH 796
            +++HSEKLA+A+GL+       IRI KNLR+C DCH A K+IS V+ R II+RD NRFH
Sbjct: 623 SVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCHNATKFISQVFERMIIVRDRNRFH 682

Query: 797 HFKAGNCSCGDYW 809
           HFK G CSC DYW
Sbjct: 683 HFKDGLCSCNDYW 695



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/430 (30%), Positives = 221/430 (51%), Gaps = 3/430 (0%)

Query: 86  AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL 145
           A  +FN         ++ +I G +       A  LF +M  +  +  ++T  +VL+ CS 
Sbjct: 74  ALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSR 133

Query: 146 KGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTT 205
              L+ GEQ H   +K+ F  N FV   L+ MYA C  I  A ++F   P+ ++ VAW +
Sbjct: 134 MKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPE-RSIVAWNS 192

Query: 206 MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
           M++GY++NG   + ++ FR +    +E +  T  S+L AC  ++  + G  +   I+S G
Sbjct: 193 MLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKG 252

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
              N  + ++LIDMYAKCG +D+AR+L +  +  + V+W++MI G+A+    KEAL+LF 
Sbjct: 253 LRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFH 312

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           +M   ++  ++ T  SVL   A        K VH  I K   +    +   LID YAK G
Sbjct: 313 EMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCG 372

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
            +D +  VF  M  K+V +WT+LI G A +G  + AL++FS M  + + P+ V    +LS
Sbjct: 373 YIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLS 432

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDSM-HTRDV 503
           AC+   +++ G+ +     +       +     +V +  + G + +A +  D+M    + 
Sbjct: 433 ACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNA 492

Query: 504 ITWTALIMGC 513
           + W  L+  C
Sbjct: 493 VVWRTLLASC 502



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 182/376 (48%), Gaps = 13/376 (3%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  NT+I  YAN G++  A+ +F+  P ++   W+S++ GY+  GL  E  +LF ++   
Sbjct: 157 FVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILEL 216

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
                  T+ +VL  C     L+ GE    Y +      N  + T L+DMYAKC  +  A
Sbjct: 217 RIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTA 276

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             LF    D ++ VAW+ MI+GY+Q     +A+  F +M+   V  N+ T  S+L +CA 
Sbjct: 277 RKLFDEM-DKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAM 335

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           + A + G  VH  I     +  V + + LID YAKCG +D +  + +     N  +W ++
Sbjct: 336 LGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTAL 395

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI----- 362
           I G A  G  K AL  F  M   D+K +D T+  VL+  +    ++  + + + +     
Sbjct: 396 IQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFD 455

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFM-VFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           ++   E Y      ++D+  + G L+ A+  + N+    + + W +L+  C  H + E A
Sbjct: 456 IEPRIEHY----GCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMA 511

Query: 422 LKYFSDMRISGICPDH 437
            K      I+ + P H
Sbjct: 512 EKSLE--HITRLEPAH 525



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 118/246 (47%), Gaps = 3/246 (1%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           R+     ++I  YA  G++  A+KLF+E   ++   WS++I GY+      EA  LF +M
Sbjct: 255 RNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEM 314

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
           Q     P++ T+ +VL  C++ G  + G+  H Y  K    L   + T L+D YAKC  I
Sbjct: 315 QKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYI 374

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
             +  +FK     KN   WT +I G + NG G  A+E F  M    V+ N  TF  +L+A
Sbjct: 375 DRSVEVFKEM-SFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSA 433

Query: 245 CAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI-DNEV 302
           C+     D G  +   +      E  +     ++D+  + G L+ A + ++      N V
Sbjct: 434 CSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAV 493

Query: 303 SWNSMI 308
            W +++
Sbjct: 494 VWRTLL 499


>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 271/691 (39%), Positives = 389/691 (56%), Gaps = 36/691 (5%)

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY---LFKMFPDGKNHVAWTTMITG 209
           +Q H   I T    N  V   ++    K + + + EY   +F   P G NH  W  MI G
Sbjct: 36  KQIHSQTICTGLISNPIVPAQIIAFCCKHE-LGDMEYARMVFDTMP-GPNHFVWNNMIKG 93

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
           YS+ G    A+  + +M   GV  +++T+P +L      +A   G ++H  I+  GF +N
Sbjct: 94  YSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSN 153

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA 329
           V+VQ+ALI +Y+  G++  AR + + S   + V+WN MI G+ R     E++ LF +M  
Sbjct: 154 VFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMER 213

Query: 330 RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDC 389
             +     T  SVL+  +   DLN  K VH  +     E  + + NALIDMYA  G++D 
Sbjct: 214 MRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDT 273

Query: 390 AFMVFNLMQDKDVISWTSLITGCAYHGS-------------------------------Y 418
           A  +F+ M+ +DVISWT+++TG    G                                +
Sbjct: 274 ALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRF 333

Query: 419 EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSL 478
           +E L  F +M+ + I PD   + SIL+ACA L  LE G+ + A   K+       V N+L
Sbjct: 334 KEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNAL 393

Query: 479 VLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDY 538
           + +Y  CG +  A R+F++M  RD I+WTA+I G A NG G+EAL  + QML     PD 
Sbjct: 394 IDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDE 453

Query: 539 ITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLD 598
           +T +G+L AC+H+G+ +  + +F  M   +GI+P   HY CM+DLLGR+G L EA  ++ 
Sbjct: 454 VTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIK 513

Query: 599 QMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWED 658
            M  +P++ VW +LL ACRVH D E+ E AA  + ELEP N   YV L N+Y+   +WE 
Sbjct: 514 NMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEK 573

Query: 659 AARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGY 718
              VRKLM  RGI+K PGCS +E N  VH F++ D+ HP   +IYSK+DE+ + +K AGY
Sbjct: 574 LHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFAGY 633

Query: 719 VPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKY 778
            PD +    ++ EE KE  +  HSEKLA+AFGL++   G  IRI KNLR+C DCH   K 
Sbjct: 634 SPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGPGVTIRIVKNLRMCVDCHYVAKL 693

Query: 779 ISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +S VY R +I+RD  RFHHF+ G+CSC DYW
Sbjct: 694 VSKVYNREVIVRDRTRFHHFRHGSCSCKDYW 724



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 152/531 (28%), Positives = 253/531 (47%), Gaps = 44/531 (8%)

Query: 81  GRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVL 140
           G +  A+ +F+  P  N F W+++I GYS  G    A  ++ +M   G  P +YT   +L
Sbjct: 67  GDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLL 126

Query: 141 RLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNH 200
           +  +    ++ G + H + +K  F  N FV   L+ +Y+    +  A  +F     G + 
Sbjct: 127 KRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKG-DV 185

Query: 201 VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
           V W  MI+GY+++    ++++ F +M    V  +  T  S+L+AC+ +   + G +VH  
Sbjct: 186 VTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRY 245

Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSA---------RRLLEYSEI------------- 298
           +     E    +++ALIDMYA CGD+D+A         R ++ ++ I             
Sbjct: 246 VKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLA 305

Query: 299 ---------DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
                     + VSW +MI G+ +    KE LSLF++M A +IK D+FT  S+L   A  
Sbjct: 306 RNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHL 365

Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
             L   + + + I K   +   FV NALIDMY   GN++ A  +FN M  +D ISWT++I
Sbjct: 366 GALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVI 425

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
            G A +G  EEAL  FS M  + I PD V    +L AC    +++ G++  A      G 
Sbjct: 426 FGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGI 485

Query: 470 -SSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYD 527
             +++    +V +  + G + +A+ V  +M  + + I W +L+  C  +   + A     
Sbjct: 486 EPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQ 545

Query: 528 QMLARGTKPD----YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
           Q+L    +P+    Y+    +  AC+        R     MD+  GIK  P
Sbjct: 546 QILE--LEPENGAVYVLLCNIYAACNRWEKLHEVRKLM--MDR--GIKKTP 590



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 207/453 (45%), Gaps = 48/453 (10%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N +I  Y+ SG +  A+ +F+ +   +  TW+ +I GY+      E+ +LF +M+  
Sbjct: 155 FVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERM 214

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK----- 182
              PS  TL +VL  CS    L  G++ H Y      +    +   L+DMYA C      
Sbjct: 215 RVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTA 274

Query: 183 -CIFE-------------------------AEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
             IF+                         A   F   P+ ++ V+WT MI GY Q    
Sbjct: 275 LGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPE-RDFVSWTAMIDGYLQVNRF 333

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
            + +  FR+M+   ++ ++FT  SILTACA + A + G  +   I  +  + + +V +AL
Sbjct: 334 KEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNAL 393

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           IDMY  CG+++ A R+       +++SW ++I G A  G+ +EAL +F +M    I  D+
Sbjct: 394 IDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDE 453

Query: 337 FTYPSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVF- 394
            T   VL  C  S +     K    +  + G E        ++D+  + G+L  A  V  
Sbjct: 454 VTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIK 513

Query: 395 NLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD----HVVVSSILSACAEL 450
           N+    + I W SL+  C  H   +E +   +  +I  + P+    +V++ +I +AC   
Sbjct: 514 NMPVKPNSIVWGSLLGACRVH--RDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRW 571

Query: 451 TVLEFGQQVHAVFL-----KSGGCSSLSVDNSL 478
             L    +V  + +     K+ GCS + ++ S+
Sbjct: 572 EKL---HEVRKLMMDRGIKKTPGCSLIEMNGSV 601



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 147/288 (51%), Gaps = 6/288 (2%)

Query: 24  RYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGR 82
           RY  ++   ++P   L  AL+D ++  G++D A  +F+ M  RD  +W  ++  + N G+
Sbjct: 244 RYVKDL--KIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQ 301

Query: 83  LREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRL 142
           +  A+  F++ P ++F +W+++I GY       E   LF +MQ    +P ++T+ ++L  
Sbjct: 302 VGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTA 361

Query: 143 CSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVA 202
           C+  G L+ GE    Y  K    +++FV   L+DMY  C  + +A  +F   P  ++ ++
Sbjct: 362 CAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPH-RDKIS 420

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
           WT +I G + NGYG +A++ F  M    +  ++ T   +L AC      D G +    + 
Sbjct: 421 WTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMT 480

Query: 263 SS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
           +  G E NV     ++D+  + G L  A  +++   +  N + W S++
Sbjct: 481 TQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLL 528


>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
 gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
 gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 842

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 290/805 (36%), Positives = 436/805 (54%), Gaps = 42/805 (5%)

Query: 46  FSNSGEIDEAGQLFEKMS----DRDGFTWNTMIAAYANSG---RLREAKKLF-NETPFKN 97
             N   IDE       ++    D D  T   ++A     G    L  AK++F N   +  
Sbjct: 39  LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
            F ++SLI GY++ GL  EA  LF +M   G  P +YT    L  C+       G Q HG
Sbjct: 99  CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
             +K  +  + FV   LV  YA+C  +  A  +F    + +N V+WT+MI GY++  +  
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSE-RNVVSWTSMICGYARRDFAK 217

Query: 218 KAIECF-RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
            A++ F R +R E V  N  T   +++ACA +   + G +V+  I +SG E N  + SAL
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSAL 277

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           +DMY KC  +D A+RL +     N    N+M   + RQG  +EAL +F  M    ++ D 
Sbjct: 278 VDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDR 337

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK------------- 383
            +  S ++  +   ++   KS H  +++ GFE +  + NALIDMY K             
Sbjct: 338 ISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR 397

Query: 384 ------------------QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
                              G +D A+  F  M +K+++SW ++I+G      +EEA++ F
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457

Query: 426 SDMRIS-GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
             M+   G+  D V + SI SAC  L  L+  + ++    K+G    + +  +LV ++++
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSR 517

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG    A  +F+S+  RDV  WTA I   A  G  + A++ +D M+ +G KPD + FVG 
Sbjct: 518 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGA 577

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L ACSH GL +  +  F SM K++G+ P   HY CM+DLLGR+G L EA  L++ M  EP
Sbjct: 578 LTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEP 637

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
           +  +W +LL+ACRV G++E+   AA  +  L P     YV LSN+Y++AG+W D A+VR 
Sbjct: 638 NDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRL 697

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
            MK +G+RK PG S ++   + H F S D  HP   +I + +DE+       G+VPD++ 
Sbjct: 698 SMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSN 757

Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
            L +V+E+ K   L+ HSEKLA+A+GL++  +G  IRI KNLRVC DCH+  K+ S VY 
Sbjct: 758 VLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYN 817

Query: 785 RHIILRDSNRFHHFKAGNCSCGDYW 809
           R IILRD+NRFH+ + G CSCGD+W
Sbjct: 818 REIILRDNNRFHYIRQGKCSCGDFW 842



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 142/540 (26%), Positives = 249/540 (46%), Gaps = 70/540 (12%)

Query: 16  RSKIIGPARYTHNVGNSVKPASDL--NRALVDF-SNSGEIDEAGQLFEKMSDRDGFTWNT 72
           +S+  G     H +   +  A DL    +LV F +  GE+D A ++F++MS+R+  +W +
Sbjct: 146 KSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTS 205

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           MI  YA     ++A  LF                              F  ++ E   P+
Sbjct: 206 MICGYARRDFAKDAVDLF------------------------------FRMVRDEEVTPN 235

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
             T+  V+  C+    L+ GE+ + +   +  ++N  +V+ LVDMY KC  I  A+ LF 
Sbjct: 236 SVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFD 295

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
            +    N      M + Y + G   +A+  F  M   GV  ++ +  S +++C+ +    
Sbjct: 296 EY-GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNIL 354

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL-------------------L 293
           +G   HG +L +GFE+   + +ALIDMY KC   D+A R+                   +
Sbjct: 355 WGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYV 414

Query: 294 EYSEID------------NEVSWNSMIVGFARQGFHKEALSLFKKMHARD-IKIDDFTYP 340
           E  E+D            N VSWN++I G  +    +EA+ +F  M +++ +  D  T  
Sbjct: 415 ENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMM 474

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
           S+ +       L+ AK ++  I K G +    +   L+DM+++ G+ + A  +FN + ++
Sbjct: 475 SIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR 534

Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
           DV +WT+ I   A  G+ E A++ F DM   G+ PD V     L+AC+   +++ G+++ 
Sbjct: 535 DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIF 594

Query: 461 AVFLKSGGCSSLSVD-NSLVLVYAKCGCINDANRVFDS--MHTRDVITWTALIMGCAQNG 517
              LK  G S   V    +V +  + G + +A ++ +   M   DVI W +L+  C   G
Sbjct: 595 YSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI-WNSLLAACRVQG 653


>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
 gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
          Length = 1084

 Score =  506 bits (1303), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 276/779 (35%), Positives = 430/779 (55%), Gaps = 7/779 (0%)

Query: 32   SVKPA-SDLNRALVDFSNSGEIDEAGQLFEKMSDRDGF---TWNTMIAAYANSGRLREAK 87
            SV PA ++L   LV     G   ++G L++  S + G      + ++  Y   G +  A+
Sbjct: 304  SVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSAR 363

Query: 88   KLFNETPFK-NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLK 146
            ++F+  P K N   W+ ++ GY+      E+  LF QM   G  P ++ L  +L+  +  
Sbjct: 364  RVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCL 423

Query: 147  GLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTM 206
               + G   HGY +K  F     V   L+  YAK   I  A  +F   P  ++ ++W ++
Sbjct: 424  SCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPH-QDTISWNSV 482

Query: 207  ITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF 266
            I+G + NG   +AIE F  M ++G E +  T  S+L ACA       G  VHG  + +G 
Sbjct: 483  ISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGL 542

Query: 267  EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK 326
                 + +AL+DMY+ C D  S  ++       N VSW +MI  + R G   +   L ++
Sbjct: 543  IGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQE 602

Query: 327  MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
            M    IK D F   SVL+ FA +  L   KSVH   ++ G E    V NAL++MY    N
Sbjct: 603  MVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRN 662

Query: 387  LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSA 446
            ++ A +VF+ + +KD+ISW +LI G + +    E+   FSDM +    P+ V ++ IL A
Sbjct: 663  MEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQ-FKPNTVTMTCILPA 721

Query: 447  CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITW 506
             A ++ LE G+++HA  L+ G        N+LV +Y KCG +  A  +FD +  +++I+W
Sbjct: 722  VASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISW 781

Query: 507  TALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDK 566
            T +I G   +G GK+A+  ++QM   G +PD  +F  +L+AC H+GL      +F +M K
Sbjct: 782  TIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRK 841

Query: 567  VYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGE 626
             Y I+P   HY C++DLL  +G L EA   ++ M  EPD+++W +LL  CR+H D++L E
Sbjct: 842  EYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAE 901

Query: 627  RAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQV 686
            + A+ +F+LEP N   YV L+N+Y+ A +WE   +++  +  RG+R+  GCSW+E   +V
Sbjct: 902  KVADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGCSWIEVRGKV 961

Query: 687  HIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLA 746
            H+FI+++R HP    I   +D +   ++E G+ P   ++L    +   +  L  HS KLA
Sbjct: 962  HVFIADNRNHPEWNRIAEFLDHVARRMREEGHDPKKKYSLMGANDAVHDEALCGHSSKLA 1021

Query: 747  VAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSC 805
            V FG+L LP+G PIR+ KN +VC  CH A K+IS +  R IILRDS+RFHHF+ G CSC
Sbjct: 1022 VTFGVLHLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHHFEGGRCSC 1080



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 152/485 (31%), Positives = 240/485 (49%), Gaps = 13/485 (2%)

Query: 73  MIAAYANSGRLREAKKLFNETPFK--NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           ++ AY   G L  A+ +F+E P +  +   W+SL+  Y+  G   E   LF QMQ  G  
Sbjct: 136 LVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVS 195

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  + +  VL+  +  G +  GE  HG   K        V   L+ +Y++C C+ +A  +
Sbjct: 196 PDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQV 255

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F      ++ ++W + I+GY  NG+  +A++ F  M  EG E +  T  S+L ACA +  
Sbjct: 256 FDSM-HARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGF 314

Query: 251 RDFGAQVHGCILSSGFEANV-YVQSA--------LIDMYAKCGDLDSARRLLEYSEIDNE 301
              G  VHG  + SG   ++  VQS         L+ MY KCGD+ SARR+ +       
Sbjct: 315 ELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGN 374

Query: 302 VS-WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
           V  WN ++ G+A+    +E+L LF++MH   I  D+     +L C        +    H 
Sbjct: 375 VHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHG 434

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
            +VK GF     V NALI  YAK   +D A +VF+ M  +D ISW S+I+GC  +G   E
Sbjct: 435 YLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSE 494

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
           A++ F  M + G   D   + S+L ACA       G+ VH   +K+G     S+ N+L+ 
Sbjct: 495 AIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLD 554

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           +Y+ C   +  N++F +M  ++V++WTA+I    + G   +      +M+  G KPD   
Sbjct: 555 MYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFA 614

Query: 541 FVGLL 545
              +L
Sbjct: 615 VTSVL 619



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 159/563 (28%), Positives = 271/563 (48%), Gaps = 20/563 (3%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +IA Y+  G + +A ++F+    ++  +W+S I GY + G    A +LF +M  EG  
Sbjct: 237 NALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTE 296

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT--CFDLNAF-------VVTGLVDMYAKC 181
            S  T+ +VL  C+  G    G+  HGY++K+   +DL +        + + LV MY KC
Sbjct: 297 ISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKC 356

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
             +  A  +F   P   N   W  ++ GY++     +++  F  M   G+  ++     +
Sbjct: 357 GDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCL 416

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           L     +S    G   HG ++  GF     V +ALI  YAK   +D+A  + +     + 
Sbjct: 417 LKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDT 476

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           +SWNS+I G    G + EA+ LF +M  +  ++D  T  SVL   A +      + VH  
Sbjct: 477 ISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGY 536

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
            VKTG  G   + NAL+DMY+   +      +F  M  K+V+SWT++IT     G +++ 
Sbjct: 537 SVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKV 596

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
                +M + GI PD   V+S+L   A    L+ G+ VH   +++G    L V N+L+ +
Sbjct: 597 AGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEM 656

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           Y  C  + +A  VFD +  +D+I+W  LI G ++N    E+   +  ML +  KP+ +T 
Sbjct: 657 YVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQ-FKPNTVTM 715

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPG--PDHYA--CMIDLLGRSGKLIEAKALL 597
             +L A +     E  R         Y ++ G   D Y    ++D+  + G L+ A+ L 
Sbjct: 716 TCILPAVASISSLERGREI-----HAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLF 770

Query: 598 DQMVGEPDATVWKALLSACRVHG 620
           D++  + +   W  +++   +HG
Sbjct: 771 DRLT-KKNLISWTIMIAGYGMHG 792



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 213/448 (47%), Gaps = 19/448 (4%)

Query: 139 VLRLCSLKGLLQRGEQFHGYA-IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF-KMFPD 196
           V++LC  +  L+   + H      T   + + +   LV  Y KC  +  A  +F +M P 
Sbjct: 100 VVQLCGEERSLEAARRAHALVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDEMPPR 159

Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
             +   WT++++ Y++ G   + +  FR M+  GV  +      +L   A++ +   G  
Sbjct: 160 VADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEV 219

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           +HG +   G      V +ALI +Y++CG ++ A ++ +     + +SWNS I G+   G+
Sbjct: 220 IHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGW 279

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGF-------- 367
           H  A+ LF KM +   +I   T  SVL  C     +L   K VH   +K+G         
Sbjct: 280 HDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFEL-VGKVVHGYSMKSGLLWDLESVQ 338

Query: 368 EGY-KFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGSYEEALKYF 425
            G  + + + L+ MY K G++  A  VF+ M  K +V  W  ++ G A    +EE+L  F
Sbjct: 339 SGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLF 398

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             M   GI PD   +S +L     L+    G   H   +K G  +  +V N+L+  YAK 
Sbjct: 399 EQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKS 458

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
             I++A  VFD M  +D I+W ++I GC  NG   EA++ + +M  +G + D  T + +L
Sbjct: 459 NMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVL 518

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPG 573
            AC     A +  W+   +   Y +K G
Sbjct: 519 PAC-----ARSHYWFVGRVVHGYSVKTG 541



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 176/368 (47%), Gaps = 36/368 (9%)

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVS----WNSMIVGFARQGFHKEALSLFKKMHARD 331
           L+  Y KCGDL  AR  + + E+   V+    W S++  +A+ G  +E +SLF++M    
Sbjct: 136 LVLAYLKCGDLGGAR--MVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCG 193

Query: 332 IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
           +  D      VL C AS   +   + +H L+ K G      V NALI +Y++ G ++ A 
Sbjct: 194 VSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAM 253

Query: 392 MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELT 451
            VF+ M  +D ISW S I+G   +G ++ A+  FS M   G     V V S+L ACAEL 
Sbjct: 254 QVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELG 313

Query: 452 VLEFGQQVHAVFLKSGGCSSL---------SVDNSLVLVYAKCGCINDANRVFDSMHTR- 501
               G+ VH   +KSG    L         ++ + LV +Y KCG +  A RVFD+M ++ 
Sbjct: 314 FELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKG 373

Query: 502 DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL-----FACSHAGLAEN 556
           +V  W  ++ G A+  + +E+L  ++QM   G  PD      LL      +C+  GL  +
Sbjct: 374 NVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAH 433

Query: 557 ARWYFESMDKVYGIKP--GPDHYAC--MIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
                      Y +K   G     C  +I    +S  +  A  + D+M  + D   W ++
Sbjct: 434 G----------YLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQ-DTISWNSV 482

Query: 613 LSACRVHG 620
           +S C  +G
Sbjct: 483 ISGCTSNG 490



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 143/296 (48%), Gaps = 29/296 (9%)

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY--KFVNNALIDMYAKQGNLDCAFMVFN 395
           +Y +V+        L  A+  H+L V+ G  G     +   L+  Y K G+L  A MVF+
Sbjct: 96  SYCAVVQLCGEERSLEAARRAHAL-VRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFD 154

Query: 396 LMQDK--DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
            M  +  DV  WTSL++  A  G ++E +  F  M+  G+ PD   VS +L   A L  +
Sbjct: 155 EMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSI 214

Query: 454 EFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC 513
             G+ +H +  K G   + +V N+L+ +Y++CGC+ DA +VFDSMH RD I+W + I G 
Sbjct: 215 TEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGY 274

Query: 514 AQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG------------LAENARWYF 561
             NG    A+  + +M + GT+   +T + +L AC+  G            +     W  
Sbjct: 275 FSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDL 334

Query: 562 ES----MDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
           ES    +D+  G K        ++ +  + G +  A+ + D M  + +  VW  ++
Sbjct: 335 ESVQSGIDEALGSK--------LVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIM 382


>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  506 bits (1303), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 265/654 (40%), Positives = 404/654 (61%), Gaps = 13/654 (1%)

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
           D N F    L+  YAK   +  A  LF   P   + V++ T+I  Y++ G    A + F 
Sbjct: 71  DCNVFSFNTLISAYAKESYVEVAHQLFDEMPQ-PDSVSYNTLIAAYARRGDTQPAFQLFL 129

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
           +MR   ++ + FT   I+TAC          Q+H   + +G ++ V V +ALI  Y+K G
Sbjct: 130 EMREAFLDMDGFTLSGIITACGINVG--LIRQLHALSVVTGLDSYVSVGNALITSYSKNG 187

Query: 285 DLDSARRLLEY-SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
            L  ARR+  + SE  +EVSWNSM+V + +     +AL L+ +M  R + +D FT  SVL
Sbjct: 188 FLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVL 247

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN--LDCAFMVFNLMQDKD 401
             F +  DL      H+ ++K+G+     V + LID+Y+K G   LDC   VF+ + + D
Sbjct: 248 TAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCR-KVFDEISNPD 306

Query: 402 VISWTSLITGCA-YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
           ++ W ++I+G + Y    +EAL+ F  ++  G  PD   +  ++SAC+ ++    G+QVH
Sbjct: 307 LVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVH 366

Query: 461 AVFLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKG 519
            + LK    S+ +SV+N+L+ +Y+KCG + DA  +FD+M   + +++ ++I G AQ+G G
Sbjct: 367 GLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMG 426

Query: 520 KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC 579
            ++L  + +ML     P  ITF+ +L AC+H G  E+ + YF  M + +GI+P   H++C
Sbjct: 427 FQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSC 486

Query: 580 MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMN 639
           MIDLLGR+GKL EA+ L++ +  +P    W ALL ACR+HG++EL  +AAN L +L+P+N
Sbjct: 487 MIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPLN 546

Query: 640 AMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLR 699
           A PYV L+N+YS  G+ +DAA VRKLM+ RG++K+PGCSW+E N ++HIF++ED  HP+ 
Sbjct: 547 AAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMI 606

Query: 700 TDIYSKIDEIMLLIKEAGYVPDMNFAL----HNVEEEGKEIGLAYHSEKLAVAFGLLTLP 755
             I   ++E+M  IK+ GY P++  A       V +  +E+ L +HSEKLAV+FGL++  
Sbjct: 607 KKIQEYLEEMMRKIKKVGYTPEVRSASVGGDDRVWQREEELRLGHHSEKLAVSFGLMSTR 666

Query: 756 QGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +G PI +FKNLR+C DCH A+KYIS V  R I +RDS+RFH FK G CSCG YW
Sbjct: 667 EGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 144/497 (28%), Positives = 253/497 (50%), Gaps = 9/497 (1%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  L+ +S    +  A ++F+   D + F++NT+I+AYA    +  A +LF+E P  +  
Sbjct: 47  NHFLLLYSKCRRLSAARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSV 106

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           ++++LI  Y+  G    AF+LF +M+        +TL  ++  C +   L R  Q H  +
Sbjct: 107 SYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLIR--QLHALS 164

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           + T  D    V   L+  Y+K   + EA  +F    + ++ V+W +M+  Y Q+  G KA
Sbjct: 165 VVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKA 224

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           +E + +M V G+  + FT  S+LTA   V     G Q H  ++ SG+  N +V S LID+
Sbjct: 225 LELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDL 284

Query: 280 YAKCGD--LDSARRLLEYSEIDNEVSWNSMIVGFA-RQGFHKEALSLFKKMHARDIKIDD 336
           Y+KCG   LD  +   E S  D  V WN+MI G++  +    EAL  F+++     + DD
Sbjct: 285 YSKCGGCMLDCRKVFDEISNPD-LVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDD 343

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF-VNNALIDMYAKQGNLDCAFMVFN 395
            +   V++  ++    +  + VH L +K      +  VNNALI MY+K GNL  A  +F+
Sbjct: 344 CSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFD 403

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
            M + + +S+ S+I G A HG   ++L  F  M      P ++   S+L+ACA    +E 
Sbjct: 404 TMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVED 463

Query: 456 GQQVHAVFLKSGGCSSLSVDNS-LVLVYAKCGCINDANRVFDSM-HTRDVITWTALIMGC 513
           G+    +  +  G    +   S ++ +  + G +++A R+ +++        W+AL+  C
Sbjct: 464 GKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGAC 523

Query: 514 AQNGKGKEALQFYDQML 530
             +G  + A++  +++L
Sbjct: 524 RIHGNVELAIKAANRLL 540



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 128/486 (26%), Positives = 223/486 (45%), Gaps = 59/486 (12%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE-- 294
           +F   L  C A      G  +H   + S    + Y+ +  + +Y+KC  L +ARR+ +  
Sbjct: 10  SFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHT 69

Query: 295 -------------------YSEIDNE----------VSWNSMIVGFARQGFHKEALSLFK 325
                              Y E+ ++          VS+N++I  +AR+G  + A  LF 
Sbjct: 70  HDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFL 129

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           +M    + +D FT   ++     N+ L   + +H+L V TG + Y  V NALI  Y+K G
Sbjct: 130 EMREAFLDMDGFTLSGIITACGINVGL--IRQLHALSVVTGLDSYVSVGNALITSYSKNG 187

Query: 386 NLDCAFMVFN-LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
            L  A  +F+ L +D+D +SW S++     H    +AL+ + +M + G+  D   ++S+L
Sbjct: 188 FLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVL 247

Query: 445 SACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC-GCINDANRVFDSMHTRDV 503
           +A   +  L  G Q HA  +KSG   +  V + L+ +Y+KC GC+ D  +VFD +   D+
Sbjct: 248 TAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDL 307

Query: 504 ITWTALIMGCA-QNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
           + W  +I G +       EAL+ + Q+   G +PD  + V ++ ACS+       R    
Sbjct: 308 VLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGR---- 363

Query: 563 SMDKVYGIKPGPDHYA-------CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
              +V+G+    D  +        +I +  + G L +AK L D M  E +   + ++++ 
Sbjct: 364 ---QVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTM-PEHNTVSYNSMIAG 419

Query: 616 CRVHG----DLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR-G 670
              HG     L L +R      +  P N + ++ +    +  G+ ED      +MK + G
Sbjct: 420 YAQHGMGFQSLHLFQRMLE--MDFTPTN-ITFISVLAACAHTGRVEDGKIYFNMMKQKFG 476

Query: 671 IRKEPG 676
           I  E G
Sbjct: 477 IEPEAG 482


>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 793

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 289/816 (35%), Positives = 446/816 (54%), Gaps = 49/816 (6%)

Query: 7   KILNFSLRCRSKIIGPARYTHNVGNSVKP-ASDLNRALVDFSNSGEIDEAGQLFEKMSDR 65
           K++ FS +  S I G   + H +  +  P    LN  L  +S  GE+  A +LF++MS+R
Sbjct: 14  KLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMSER 73

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
              ++N +I+ Y   G   +A  LF+E                                +
Sbjct: 74  SVISYNILISGYGGMGFYHKAIGLFSEA-------------------------------R 102

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           +   +  +++   VL  C        G+  HG AI        F+   L+DMY KC+ I 
Sbjct: 103 MACLKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERID 162

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A  LF+   D  ++V+W ++ITGY++ G   + ++    M   G+  N FT  S L +C
Sbjct: 163 HARLLFES-SDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSC 221

Query: 246 --AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
                +   +G  +HG  +  G + ++ V +AL+DMYAK G L  A +L   S   N V 
Sbjct: 222 YLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVM 281

Query: 304 WNSMIVGFAR-QGFHK----EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
           +N+MI GF + +   K    EAL LF +M  + IK  DFT+ S++            K +
Sbjct: 282 YNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQI 341

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           H+ I K   +  +F+ + LI++Y+  G+ +     FN     D++SWT++I G A +G +
Sbjct: 342 HAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQF 401

Query: 419 EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSL 478
           E AL  F ++  SG  PD  +++++LSACA++     G+QVH   +K+G  +   V NS 
Sbjct: 402 ESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQ 461

Query: 479 VLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDY 538
           + +YAK G ++ A   F+ +   DV++W+ +I   AQ+G  K+A+  ++ M + G  P+ 
Sbjct: 462 ISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQ 521

Query: 539 ITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA-LL 597
           ITF+G+L ACSH GL E    Y+ESM K Y +K    H  C++DLL R+G+L++AK  +L
Sbjct: 522 ITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFIL 581

Query: 598 DQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWE 657
           +   G+    +W+ LLS CR++ D+  G+  A  L EL+P  +  YV L N+Y+ AG   
Sbjct: 582 NSGFGD-HPVMWRTLLSGCRIYKDIVTGKHVAEKLIELDPQESSSYVLLYNIYTDAGIDL 640

Query: 658 DAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAG 717
            A ++R+LMK RGIRKEPG SW+E  ++VH F+  D  HP+   IY K++ ++   ++ G
Sbjct: 641 PATKIRELMKDRGIRKEPGQSWIEVGNEVHSFVVGDISHPMSQIIYKKLEGMLEKKRKIG 700

Query: 718 YVPDMNFALHNVEEEGKEI----GLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCH 773
           Y+      + NV    KE+    G+ +HSEKLAV+FG+++LP  AP+++ KNLRVC DCH
Sbjct: 701 YIDQ---KIQNVTISTKEVKGTLGVNHHSEKLAVSFGIVSLPPSAPVKVMKNLRVCHDCH 757

Query: 774 TAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             MK IS V  R IILRDS RFHHFK G+CSC DYW
Sbjct: 758 ATMKLISVVEKREIILRDSLRFHHFKEGSCSCNDYW 793



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 173/567 (30%), Positives = 283/567 (49%), Gaps = 50/567 (8%)

Query: 131 PSQYTLDNV-----LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           PS + LD+V     ++  S  G    G+  H + IKT F+   F++   +++Y+K   + 
Sbjct: 2   PSVFPLDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMG 61

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A+ LF    + ++ +++  +I+GY   G+  KAI  F + R+  ++ ++F++  +L+AC
Sbjct: 62  NAQKLFDRMSE-RSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSAC 120

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
             +     G  +HG  +  G    V++ + LIDMY KC  +D AR L E S+  + VSWN
Sbjct: 121 GQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWN 180

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNN----AKSVHS 360
           S+I G+AR G ++E L L  KMH   ++++ FT  S L +C+   ++LNN     K++H 
Sbjct: 181 SLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCY---LNLNNMVSYGKTLHG 237

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG--------- 411
             VK G +    V  AL+DMYAK G L  A  +F    +++V+ + ++I G         
Sbjct: 238 YTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDK 297

Query: 412 -CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
            CAY     EALK FS M+  GI P     SSI+  C  +   E+G+Q+HA   K    S
Sbjct: 298 ECAY-----EALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQS 352

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
              + ++L+ +Y+  G   D  + F+S    D+++WT +I G AQNG+ + AL  + ++L
Sbjct: 353 DEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELL 412

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACM----IDLLGR 586
           A G KPD      +L AC+      +           Y +K G    A +    I +  +
Sbjct: 413 ASGKKPDEFIITTMLSACADVAAERSGEQVHG-----YAVKTGIGTLAIVQNSQISMYAK 467

Query: 587 SGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL------EPMNA 640
           SG L  AK   ++ +  PD   W  ++ +   HG      + A NLFEL       P N 
Sbjct: 468 SGNLDSAKITFEE-IKNPDVVSWSVMICSNAQHGH----AKDAINLFELMKSYGIHP-NQ 521

Query: 641 MPYVQLSNMYSTAGKWEDAARVRKLMK 667
           + ++ +    S  G  E+  R  + MK
Sbjct: 522 ITFLGVLTACSHGGLVEEGLRYYESMK 548


>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
          Length = 670

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 266/644 (41%), Positives = 381/644 (59%), Gaps = 33/644 (5%)

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           N + W TM  G++ +     A++ +  M   G+  N +TFP +L +CA + A   G Q+H
Sbjct: 27  NLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKASKEGLQIH 86

Query: 259 GCILSSGFEANVYVQSALIDMY-------------------------------AKCGDLD 287
           G +L  G+E ++YV ++LI MY                               A  G ++
Sbjct: 87  GHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIE 146

Query: 288 SARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFA 347
           SAR + +   + + VSWN+MI G+   G +KEAL LFK+M   +++ D+ T  +V++  A
Sbjct: 147 SARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASA 206

Query: 348 SNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTS 407
            +  +   + VHS I   GF     + NALID Y+K G ++ A  +F  +  KDVISW  
Sbjct: 207 RSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNI 266

Query: 408 LITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK-- 465
           LI G  +   Y+EAL  F +M  SG  P+ V + SIL ACA L  ++ G+ +H    K  
Sbjct: 267 LIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRL 326

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
            G  ++ S+  SL+ +Y+KCG I  A++VF+SM  + +  W A+I G A +G+   A   
Sbjct: 327 KGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDI 386

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
           + +M     KPD ITFVGLL ACSHAG+ +  R  F SM   Y I P  +HY CMIDLLG
Sbjct: 387 FSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLG 446

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ 645
            SG   EA+ ++  M  EPD  +W +LL AC++HG++ELGE+ A NLF++EP N   YV 
Sbjct: 447 HSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVL 506

Query: 646 LSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSK 705
           LSN+Y+TAG+W + AR+R L+  +G++K PGCS +E +S VH FI  D+ HP   +IY  
Sbjct: 507 LSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGM 566

Query: 706 IDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKN 765
           ++E+ +L++EAG+VPD +  L  +EEE KE  L +HSEKLA+AFGL++      + I KN
Sbjct: 567 LEEMEVLLQEAGFVPDTSEVLQEMEEEFKEGALRHHSEKLAIAFGLISTKPETKLTIVKN 626

Query: 766 LRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           LRVC +CH A K IS +Y R II RD  RFHHF+ G CSC DYW
Sbjct: 627 LRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 670



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 222/466 (47%), Gaps = 34/466 (7%)

Query: 86  AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL 145
           A  +F      N   W+++  G++     + A +L+  M   G  P+ YT   +L+ C+ 
Sbjct: 16  AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75

Query: 146 KGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF-------------- 191
               + G Q HG+ +K  ++L+ +V T L+ MY + + + +A  +F              
Sbjct: 76  LKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTAL 135

Query: 192 --------------KMFPD--GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
                          MF +   K+ V+W  MI+GY + G   +A+E F++M    V  ++
Sbjct: 136 VTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDE 195

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            T  ++++A A   + + G QVH  I   GF +N+ + +ALID Y+KCG++++A  L   
Sbjct: 196 STMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLG 255

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               + +SWN +I G+     +KEAL LF++M       +D T  S+L+  A    ++  
Sbjct: 256 LSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIG 315

Query: 356 KSVHSLIVK--TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
           + +H  I K   G      +  +LIDMY+K G+++ A  VFN M  K + +W ++I G A
Sbjct: 316 RWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFA 375

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SL 472
            HG    A   FS MR + I PD +    +LSAC+   +L+ G+ +      +   +  L
Sbjct: 376 MHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKL 435

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNG 517
                ++ +    G   +A  +  +M    D + W +L+  C  +G
Sbjct: 436 EHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHG 481



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 213/438 (48%), Gaps = 19/438 (4%)

Query: 52  IDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNY 111
           +++A ++F++ S RD  ++  ++  YA+ G +  A+ +F+E P K+  +W+++I GY   
Sbjct: 114 LEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVET 173

Query: 112 GLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV 171
           G   EA ELF +M     RP + T+  V+   +  G ++ G Q H +     F  N  +V
Sbjct: 174 GNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIV 233

Query: 172 TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV 231
             L+D Y+KC  +  A  LF +    K+ ++W  +I GY+      +A+  F++M   G 
Sbjct: 234 NALIDFYSKCGEMETACGLF-LGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGE 292

Query: 232 ESNQFTFPSILTACAAVSARDFGAQVHGCILS--SGFEANVYVQSALIDMYAKCGDLDSA 289
             N  T  SIL ACA + A D G  +H  I     G      ++++LIDMY+KCGD+++A
Sbjct: 293 SPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAA 352

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC--FA 347
            ++       +  +WN+MI GFA  G    A  +F +M   +IK DD T+  +L+    A
Sbjct: 353 HQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHA 412

Query: 348 SNIDLNN---AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL-DCAFMVFNLMQDKDVI 403
             +DL         H+  +    E Y      +ID+    G   +   M+  +  + D +
Sbjct: 413 GMLDLGRHIFRSMTHNYKITPKLEHY----GCMIDLLGHSGLFKEAEEMISTMTMEPDGV 468

Query: 404 SWTSLITGCAYHGSYEEALKYFSDM-RISGICPDHVVVSSILSACA----ELTVLEFGQQ 458
            W SL+  C  HG+ E   K+  ++ +I    P   V+ S + A A    E+  +  G  
Sbjct: 469 IWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIR-GLL 527

Query: 459 VHAVFLKSGGCSSLSVDN 476
                 K  GCSS+ +D+
Sbjct: 528 NDKGMKKVPGCSSIEIDS 545



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 177/393 (45%), Gaps = 50/393 (12%)

Query: 260 CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKE 319
           CILS  FE   Y  S                 + E  +  N + WN+M  G A       
Sbjct: 4   CILSPHFEGLPYAIS-----------------VFETIQEPNLLIWNTMFRGHALSPDPVS 46

Query: 320 ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALID 379
           AL L+  M +  +  + +T+P +L   A          +H  ++K G+E   +V+ +LI 
Sbjct: 47  ALKLYVCMISLGLLPNSYTFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLIS 106

Query: 380 MYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH------------------------ 415
           MY +   L+ A  VF+    +DV+S+T+L+TG A                          
Sbjct: 107 MYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAM 166

Query: 416 -------GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
                  G+Y+EAL+ F +M  + + PD   + +++SA A    +E G+QVH+     G 
Sbjct: 167 ISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGF 226

Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
            S+L + N+L+  Y+KCG +  A  +F  +  +DVI+W  LI G       KEAL  + +
Sbjct: 227 GSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQE 286

Query: 529 MLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDK-VYGIKPGPDHYACMIDLLGRS 587
           ML  G  P+ +T + +L AC+H G  +  RW    +DK + G+         +ID+  + 
Sbjct: 287 MLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKC 346

Query: 588 GKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
           G +  A  + + M+       W A++    +HG
Sbjct: 347 GDIEAAHQVFNSML-HKSLPAWNAMIFGFAMHG 378



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 39/234 (16%)

Query: 27  HNVGNSVKPASDLNRALVDF-SNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLRE 85
           H  G+++K    +  AL+DF S  GE++ A  LF  +S +D  +WN +I  Y +    +E
Sbjct: 224 HGFGSNLK----IVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKE 279

Query: 86  AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL 145
           A  LF E                               M   G  P+  T+ ++L  C+ 
Sbjct: 280 ALLLFQE-------------------------------MLRSGESPNDVTMLSILHACAH 308

Query: 146 KGLLQRGEQFHGYAIKTCFDLN--AFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAW 203
            G +  G   H Y  K    +   + + T L+DMY+KC  I  A  +F      K+  AW
Sbjct: 309 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLH-KSLPAW 367

Query: 204 TTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
             MI G++ +G    A + F  MR   ++ +  TF  +L+AC+     D G  +
Sbjct: 368 NAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHI 421


>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
          Length = 744

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 279/744 (37%), Positives = 419/744 (56%), Gaps = 40/744 (5%)

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQY---TLDNVLRLCSLKGLLQRGEQFHGY 158
           ++ +  +S  G  +++ +L  Q  +    PS++      N L+ C  K    RG+  H  
Sbjct: 5   NNFLIQFSRRGFSVQSAKLT-QEFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCE 63

Query: 159 AIKT--CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
            +K   C DL A+ +  L++MY K   + +A  LF   P+ +N +++ T+I GY+++   
Sbjct: 64  ILKRGGCLDLFAWNI--LLNMYVKSDFLCDASKLFDEMPE-RNTISFVTLIQGYAESVRF 120

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
            +AIE F  +  EG E N F F +IL    +    + G  +H CI   G E+N +V +AL
Sbjct: 121 LEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFVGTAL 180

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           ID Y+ CG +D AR + +     + VSW  M+  FA     KEAL LF +M     K ++
Sbjct: 181 IDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNN 240

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
           FT+ SV          +  KSVH   +K+ +E   +V  AL+D+Y K G++D A   F  
Sbjct: 241 FTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFEE 300

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
           +  KDVI W+ +I   A     +EA++ F  MR + + P+    +S+L ACA +  L  G
Sbjct: 301 IPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLG 360

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
            Q+H   +K G  S + V N+L+ VYAKCG + ++  +F     R+ +TW  +I+G  Q 
Sbjct: 361 NQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQL 420

Query: 517 GKGKEALQFYDQML-------------------------------ARGTKPDYITFVGLL 545
           G G++AL+ +  ML                               +   KPD +TFVG+L
Sbjct: 421 GDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKPDKLTFVGVL 480

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
            AC++AGL +  + YF SM + +GI+P  +HY CM+ LLGR G L +A  L+D++  +P 
Sbjct: 481 SACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPS 540

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
             VW+ALL AC +H D+ELG  +A  + E+EP +   +V LSNMY+TA +W++ A VRK 
Sbjct: 541 VMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKN 600

Query: 666 MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFA 725
           MK +G++KEPG SW+E+   VH F   D  HP    I   ++ + +  K+AGY+P+ N  
Sbjct: 601 MKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVV 660

Query: 726 LHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLR 785
           L +VE+E KE  L  HSE+LA++FG++  P G+PIRI KNLR+C DCH A+K IS V  R
Sbjct: 661 LLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQR 720

Query: 786 HIILRDSNRFHHFKAGNCSCGDYW 809
            I++RD NRFHHF+ G CSCGDYW
Sbjct: 721 EIVVRDINRFHHFQEGLCSCGDYW 744



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 211/405 (52%), Gaps = 13/405 (3%)

Query: 58  LFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEA 117
           +F+   + + F    +I AY+  GR+  A+++F+   +K+  +W+ ++  ++      EA
Sbjct: 165 IFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEA 224

Query: 118 FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
            +LF QM++ G++P+ +T  +V + C        G+  HG A+K+ ++L+ +V   L+D+
Sbjct: 225 LKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDL 284

Query: 178 YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
           Y K   I +A   F+  P  K+ + W+ MI  Y+Q+    +A+E F  MR   V  NQFT
Sbjct: 285 YTKSGDIDDARRAFEEIPK-KDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFT 343

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           F S+L ACA +   + G Q+H  ++  G  ++V+V +AL+D+YAKCG ++++  L   S 
Sbjct: 344 FASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESP 403

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
             N+V+WN++IVG  + G  ++AL LF  M    ++  + TY S L   AS   L     
Sbjct: 404 HRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQ 463

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVF-NLMQDKDVIS----WTSLITGC 412
           +HSL VK      K     ++   A  G LD     F +++QD  +      +T ++   
Sbjct: 464 IHSLTVKPD----KLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLL 519

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
              G  ++A+K   ++      P  +V  ++L AC     +E G+
Sbjct: 520 GRGGHLDKAVKLIDEIPFQ---PSVMVWRALLGACVIHNDIELGR 561



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 111/218 (50%), Gaps = 33/218 (15%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           AL+D ++ SG+ID+A + FE++  +D   W+ MIA YA S + +                
Sbjct: 280 ALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSK---------------- 323

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
                          EA E+F+QM+     P+Q+T  +VL+ C+    L  G Q H + I
Sbjct: 324 ---------------EAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVI 368

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAI 220
           K     + FV   L+D+YAKC  +  +  LF   P  +N V W T+I G+ Q G G KA+
Sbjct: 369 KIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPH-RNDVTWNTVIVGHVQLGDGEKAL 427

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
             F +M    V++ + T+ S L ACA+++A + G Q+H
Sbjct: 428 RLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIH 465


>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 754

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 268/719 (37%), Positives = 411/719 (57%), Gaps = 43/719 (5%)

Query: 129 YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
           + P  Y L+++L   +  G L    +          D N F    L+   A  + + + +
Sbjct: 41  HPPPTYVLNHLLTAYARSGRLPLARRL----FDAMPDPNLFTRNALLSALAHARLLPDMD 96

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF-----RDMRVEG--VESNQFTFPSI 241
            LF   P  ++ V++  +I G+S  G   +A   +      +  V+G  V  ++ T   +
Sbjct: 97  RLFASMPQ-RDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGM 155

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN- 300
           + A +A+  R  G QVH  I+  GF A  +  S L+DMYAK G +  A+R+ +   + N 
Sbjct: 156 VMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNV 215

Query: 301 ------------------------------EVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
                                          ++W +M+ G  + G   EAL +F++M A 
Sbjct: 216 VMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAE 275

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
            + ID +T+ S+L    +       K +H+  ++T ++G  FV +AL+DMY+K  ++  A
Sbjct: 276 GVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLA 335

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
             VF  M  K++ISWT++I G   +G  EEA++ FS+M+  GI P+   + S++S+CA L
Sbjct: 336 EAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANL 395

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
             LE G Q H + L SG    ++V ++LV +Y KCG I DA+R+FD M   D +++TAL+
Sbjct: 396 ASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALV 455

Query: 511 MGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGI 570
            G AQ GK KE +  +++ML +G KP+ +TF+G+L ACS +GL E    YF SM + +GI
Sbjct: 456 SGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSYFHSMQQDHGI 515

Query: 571 KPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAAN 630
               DHY CMIDL  RSG+L EA+  + QM   PDA  W  LLSACR+ GD+E+G+ AA 
Sbjct: 516 VLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRGDMEIGKWAAE 575

Query: 631 NLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFI 690
           NL + +P N   YV L +M+++ G+W + A +R+ M+ R ++KEPGCSW++  ++VHIF 
Sbjct: 576 NLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRGMRDRQVKKEPGCSWIKYKNRVHIFS 635

Query: 691 SEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFG 750
           ++D+ HP    IY K+  +   + E GY PD++  LH+V +  K   L+ HSEKLA+AFG
Sbjct: 636 ADDQSHPFSGTIYEKLQWLNSKMAEEGYKPDVSSVLHDVADAEKVHMLSNHSEKLAIAFG 695

Query: 751 LLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           L+ +P+  PIR+ KNLRVC DCH A K+IS +  R I++RD+ RFH F  G CSCGD+W
Sbjct: 696 LIFVPEEMPIRVVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSNGICSCGDFW 754



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 181/620 (29%), Positives = 297/620 (47%), Gaps = 84/620 (13%)

Query: 35  PASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP 94
           P   LN  L  ++ SG +  A +LF+ M D + FT N +++A A++  L +  +LF   P
Sbjct: 44  PTYVLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHARLLPDMDRLFASMP 103

Query: 95  FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-------GYRPSQYTLDNVLRLCSLKG 147
            ++  ++++LI G+S  G    A   +  +  E         RPS+ T+  ++   S  G
Sbjct: 104 QRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVMAASALG 163

Query: 148 LLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK--------------------------- 180
               G Q H   ++  F   AF  + LVDMYAK                           
Sbjct: 164 DRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMIT 223

Query: 181 ----CKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
               CK + EA  +F+   D ++ + WTTM+TG +QNG   +A++ FR MR EGV  +Q+
Sbjct: 224 GLLRCKMVEEARGVFEAMVD-RDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQY 282

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           TF SILTAC A++A + G Q+H   + + ++ N++V SAL+DMY+KC  +  A  +    
Sbjct: 283 TFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIRLAEAVFRRM 342

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              N +SW +MIVG+ + G  +EA+ +F +M    IK +DFT  SV++  A+   L    
Sbjct: 343 TCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGA 402

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
             H + + +G   Y  V++AL+ +Y K G+++ A  +F+ M   D +S+T+L++G A  G
Sbjct: 403 QFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQVSYTALVSGYAQFG 462

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS---SLS 473
             +E +  F  M + G+ P+ V    +LSAC+   ++E             GCS   S+ 
Sbjct: 463 KAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVE------------KGCSYFHSMQ 510

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
            D+ +VL+     C+ D       +++R              +G+ KEA +F  QM    
Sbjct: 511 QDHGIVLLDDHYTCMID-------LYSR--------------SGRLKEAEEFIRQM---P 546

Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
             PD I +  LL AC   G  E  +W  E++ K       P  Y  +  +    G+  E 
Sbjct: 547 RCPDAIGWATLLSACRLRGDMEIGKWAAENLLKTD--PQNPASYVLLCSMHASKGEWSEV 604

Query: 594 ----KALLDQMVGEPDATVW 609
               + + D+ V +     W
Sbjct: 605 ALLRRGMRDRQVKKEPGCSW 624


>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
          Length = 822

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 278/760 (36%), Positives = 424/760 (55%), Gaps = 32/760 (4%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETP-FKNFFTWSSLIYGYSNYGLDIEAFELFW 122
           DRD    N+++  Y+  G +  A+ +F+     ++  +W+++    +  G +  +  L  
Sbjct: 81  DRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERGSLLLIG 140

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGL-----LQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
           +M   G  P+ YTL      C    L            H   +   +  +  V + L+DM
Sbjct: 141 EMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGL---WGTDVAVGSALIDM 197

Query: 178 YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
            A+   +  A  +F    + K  V WT +I+ Y Q     +A+E F D   +G E +++T
Sbjct: 198 LARNGDLASARKVFDGLIE-KTVVVWTLLISRYVQGECAEEAVELFLDFLEDGFEPDRYT 256

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG---DLDSARRLLE 294
             S+++AC  + +   G Q+H   L  G  ++  V   L+DMYAK      +D A ++ E
Sbjct: 257 MSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFE 316

Query: 295 YSEIDNEVSWNSMIVGFARQGFHK-EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
               ++ +SW ++I G+ + G  + + ++LF +M    IK +  TY S+L   AS  D +
Sbjct: 317 RMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHD 376

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
           + + VH+ ++K+       V NAL+ MYA+ G ++ A  VFN + ++ +I   +      
Sbjct: 377 SGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIPCIT------ 430

Query: 414 YHGSYEEALKYFSDMRIS----GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
                 E   +  D RI     GI       +S++SA A + +L  GQQ+HA+ LK+G  
Sbjct: 431 ------EGRDFPLDHRIVRMDVGISSS--TFASLISAAASVGMLTKGQQLHAMSLKAGFG 482

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
           S   V NSLV +Y++CG + DA R F+ +  R+VI+WT++I G A++G  + AL  +  M
Sbjct: 483 SDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDM 542

Query: 530 LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGK 589
           +  G KP+ +T++ +L ACSH GL    + YF SM + +G+ P  +HYACM+DLL RSG 
Sbjct: 543 ILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGI 602

Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNM 649
           + EA   +++M  + DA VWK LL ACR H ++E+GE  A N+ ELEP +  PYV LSN+
Sbjct: 603 VKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAPYVLLSNL 662

Query: 650 YSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEI 709
           Y+ AG W++ AR+R  M+   + KE G SW+E  +  H F + D  HP   DIY K+D +
Sbjct: 663 YADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGKLDTL 722

Query: 710 MLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVC 769
           +  IK  GYVPD +  LH++ +E KE  L  HSEK+AVAFGL+T     PIRIFKNLRVC
Sbjct: 723 VRQIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPKPIRIFKNLRVC 782

Query: 770 GDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            DCH+A+KY+S    R IILRDSNRFH  K G CSCG+YW
Sbjct: 783 ADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822


>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Glycine max]
          Length = 836

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 287/775 (37%), Positives = 419/775 (54%), Gaps = 37/775 (4%)

Query: 71  NTMIAAYANSGRLRE---AKKLF--NETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           N +IA+    G L     A+  F  ++    + F ++ LI GY++ GL  +A  L+ QM 
Sbjct: 63  NKLIASSVQIGTLESLDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQML 122

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           + G  P +YT   +L  CS    L  G Q HG  +K   + + FV   L+  YA+C  + 
Sbjct: 123 VMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVD 182

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
               LF    + +N V+WT++I GYS      +A+  F  M   GVE N  T   +++AC
Sbjct: 183 LGRKLFDGMLE-RNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISAC 241

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A +   + G +V   I   G E +  + +AL+DMY KCGD+ +AR++ +     N V +N
Sbjct: 242 AKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYN 301

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +++  +    +  + L +  +M  +  + D  T  S +   A   DL+  KS H+ +++ 
Sbjct: 302 TIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRN 361

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS-------- 417
           G EG+  ++NA+IDMY K G  + A  VF  M +K V++W SLI G    G         
Sbjct: 362 GLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIF 421

Query: 418 -----------------------YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLE 454
                                  +EEA++ F +M+  GI  D V +  I SAC  L  L+
Sbjct: 422 DEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALD 481

Query: 455 FGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCA 514
             + V     K+     L +  +LV ++++CG  + A  VF  M  RDV  WTA I   A
Sbjct: 482 LAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMA 541

Query: 515 QNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
             G  + A++ +++ML +  KPD + FV LL ACSH G  +  R  F SM+K +GI+P  
Sbjct: 542 MEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHI 601

Query: 575 DHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFE 634
            HY CM+DLLGR+G L EA  L+  M  EP+  VW +LL+ACR H ++EL   AA  L +
Sbjct: 602 VHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQ 661

Query: 635 LEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDR 694
           L P     +V LSN+Y++AGKW D ARVR  MK +G++K PG S +E    +H F S D 
Sbjct: 662 LAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDE 721

Query: 695 GHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTL 754
            H   T I   ++EI   + EAGYVPD    L +V+E+ KE  L+ HSEKLA+A+GL+T 
Sbjct: 722 SHAENTHIGLMLEEINCRLSEAGYVPDTTNVLLDVDEQEKEHLLSRHSEKLAMAYGLITT 781

Query: 755 PQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            QG PIR+ KNLR+C DCH+  K +S +Y R I +RD+NR+H FK G CSC DYW
Sbjct: 782 GQGIPIRVVKNLRMCSDCHSFAKLVSKLYNREITVRDNNRYHFFKEGFCSCRDYW 836



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 137/495 (27%), Positives = 233/495 (47%), Gaps = 36/495 (7%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G + +   + D F  N++I  YA  G++   +KLF+    +N  +W+SLI GYS   L  
Sbjct: 154 GAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSK 213

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  LF+QM   G  P+  T+  V+  C+    L+ G++   Y  +   +L+  +V  LV
Sbjct: 214 EAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALV 273

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMY KC  I  A  +F    + KN V + T+++ Y  + +    +    +M  +G   ++
Sbjct: 274 DMYMKCGDICAARQIFDECAN-KNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDK 332

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            T  S + ACA +     G   H  +L +G E    + +A+IDMY KCG  ++A ++ E+
Sbjct: 333 VTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEH 392

Query: 296 SEIDNEVSWNSMIVGFARQG-------------------------------FHKEALSLF 324
                 V+WNS+I G  R G                                 +EA+ LF
Sbjct: 393 MPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELF 452

Query: 325 KKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
           ++M  + I  D  T   + +       L+ AK V + I K        +  AL+DM+++ 
Sbjct: 453 REMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRC 512

Query: 385 GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
           G+   A  VF  M+ +DV +WT+ I   A  G+ E A++ F++M    + PD VV  ++L
Sbjct: 513 GDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALL 572

Query: 445 SACAELTVLEFGQQVHAVFLKSGGCSSLSVD-NSLVLVYAKCGCINDANRVFDSM--HTR 501
           +AC+    ++ G+Q+     K+ G     V    +V +  + G + +A  +  SM     
Sbjct: 573 TACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPN 632

Query: 502 DVITWTALIMGCAQN 516
           DV+ W +L+  C ++
Sbjct: 633 DVV-WGSLLAACRKH 646



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 147/292 (50%), Gaps = 4/292 (1%)

Query: 20  IGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYA 78
           +G + + + + N ++   +++ A++D +   G+ + A ++FE M ++   TWN++IA   
Sbjct: 350 VGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLV 409

Query: 79  NSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDN 138
             G +  A ++F+E   ++  +W+++I       +  EA ELF +MQ +G    + T+  
Sbjct: 410 RDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVG 469

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           +   C   G L   +    Y  K    ++  + T LVDM+++C     A ++FK   + +
Sbjct: 470 IASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRM-EKR 528

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           +  AWT  I   +  G    AIE F +M  + V+ +   F ++LTAC+   + D G Q+ 
Sbjct: 529 DVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLF 588

Query: 259 GCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
             +  + G   ++     ++D+  + G L+ A  L++   I+ N+V W S++
Sbjct: 589 WSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLL 640


>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 882

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 265/754 (35%), Positives = 424/754 (56%), Gaps = 3/754 (0%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
           Q+ E   + D +  N ++  Y+  G L  A+++F+E P ++  +W+SLI GYS++G   E
Sbjct: 131 QILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEE 190

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
           A E++ +++     P  +T+ +VL   +   ++++G+  HG+ +K+  +  + V  GL+ 
Sbjct: 191 ALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLA 250

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           MY K     +A  +F      ++ V + TMI GY +     ++++ F +  ++  + +  
Sbjct: 251 MYLKFSRPTDARRVFDEMV-VRDSVTYNTMICGYLKLEMVEESVKMFLE-NLDQFKPDIL 308

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           T  S+L AC  +        ++  +L +GF     V++ LID+YAKCGD+ +AR +    
Sbjct: 309 TVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSM 368

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
           E  + VSWNS+I G+ + G   EA+ LFK M   + + D  TY  +++      DL   K
Sbjct: 369 ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGK 428

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +HS  +K+G      V+NALIDMYAK G +  +  +FN M   D ++W ++I+ C   G
Sbjct: 429 GLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFG 488

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
            +   L+  + MR + + PD       L  CA L     G+++H   L+ G  S L + N
Sbjct: 489 DFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGN 548

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           +L+ +Y+KCGC+  + RVF+ M  RDV+TWT +I      G+G++AL+ +  M   G  P
Sbjct: 549 ALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVP 608

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           D + F+ L++ACSH+GL E     FE M   Y I P  +HYAC++DLL RS K+ +A+  
Sbjct: 609 DSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEF 668

Query: 597 LDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
           +  M  EPDA++W ++L ACR  GD+E  ER +  + EL P +    +  SN Y+   KW
Sbjct: 669 IQAMPIEPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKW 728

Query: 657 EDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA 716
           +  + +RK ++ + I+K PG SW+E   +VH+F S D   P    I+  ++ +  L+ + 
Sbjct: 729 DKVSLIRKSVRDKHIKKNPGYSWIEIGKKVHVFCSGDDSAPQSEAIHKSLEILYSLMAKE 788

Query: 717 GYVPDMNFALHNV-EEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
           GY+PD      N+ EEE K   +  HSE+LA+AFGLL    G P+++ KNLRVC DCH  
Sbjct: 789 GYIPDSREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCSDCHEV 848

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            K IS +  R I++RD+NRFH FK G CSC D W
Sbjct: 849 TKLISKIVGREILVRDANRFHLFKDGICSCKDRW 882



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 144/488 (29%), Positives = 250/488 (51%), Gaps = 11/488 (2%)

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
           L    + H   I    D + F    L+D Y+  +    +  +F+     KN   W ++I 
Sbjct: 20  LNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYIWNSIIR 79

Query: 209 GYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEA 268
            +S+NG+  KA+E +  +R   V  +++TFPS++ ACA +   + G  V+  IL  GFE+
Sbjct: 80  AFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFES 139

Query: 269 NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH 328
           ++YV +AL+DMY++ G L  AR++ +   + + VSWNS+I G++  G+++EAL ++ ++ 
Sbjct: 140 DLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELR 199

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD 388
              I  D FT  SVL  FA+ + +   + +H   +K+G      VNN L+ MY K     
Sbjct: 200 NSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPT 259

Query: 389 CAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
            A  VF+ M  +D +++ ++I G       EE++K F +  +    PD + V+S+L AC 
Sbjct: 260 DARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLE-NLDQFKPDILTVTSVLCACG 318

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
            L  L   + ++   L++G     +V N L+ VYAKCG +  A  VF+SM  +D ++W +
Sbjct: 319 HLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNS 378

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
           +I G  Q+G   EA++ +  M+    + D+IT++ L+   +       A   F       
Sbjct: 379 IISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRL-----ADLKFGKGLHSN 433

Query: 569 GIKPGP----DHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLEL 624
           GIK G          +ID+  + G++ ++  + + M G  D   W  ++SAC   GD   
Sbjct: 434 GIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSM-GTLDTVTWNTVISACVRFGDFAT 492

Query: 625 GERAANNL 632
           G +    +
Sbjct: 493 GLQVTTQM 500


>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
 gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 282/764 (36%), Positives = 425/764 (55%), Gaps = 40/764 (5%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS 109
           G+I  A   F+++  +D +TWN+MI+AYA  G    A   FNE     F + S L     
Sbjct: 89  GDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNE-----FLSTSFL----- 138

Query: 110 NYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAF 169
                               +   YT   V+R C   G L  G + H   +K  F+ + +
Sbjct: 139 --------------------QSDHYTFPPVIRAC---GNLDDGRKVHCLVLKLGFECDVY 175

Query: 170 VVTGLVDMYAKCKCIFEAEYLFK--MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR 227
           +    +  Y++   +  A  LF   M  D      W  MI+G+  NG   +A+E F +MR
Sbjct: 176 IAASFIHFYSRFGFVSLACNLFDNMMIRDIGT---WNAMISGFYLNGKVAEALEVFDEMR 232

Query: 228 VEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLD 287
            + V  +  T  S+L  C  +     G  +H   +  G E +++V +ALI+MYAK G+L 
Sbjct: 233 FKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELR 292

Query: 288 SARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFA 347
           SA  +    ++ + VSWNS++  F +      AL ++ KMH+  +  D  T  S+ +  A
Sbjct: 293 SAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAA 352

Query: 348 SNIDLNNAKSVHSLIVKTGFEGYKF-VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWT 406
              +  +++S+H  + +  +  +   + NA+IDMYAK G +D A  VF  +  KDVISW 
Sbjct: 353 ELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWN 412

Query: 407 SLITGCAYHGSYEEALKYFSDMR-ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
           SLITG + +G   EA+  +S MR  SG  P+     SIL+A ++L  L+ G + H   +K
Sbjct: 413 SLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIK 472

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
           +     + V   LV +Y KCG + DA  +F  +  +  ++W A+I     +G G +A++ 
Sbjct: 473 NFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKL 532

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
           + +M + G KPD+ITFV LL ACSH+GL +  +W F+ M + YGI+P   HY CM+DL G
Sbjct: 533 FKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFG 592

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ 645
           R+G L +A   +  M   PD +VW ALL ACR+H ++EL    +++L ++E  N   YV 
Sbjct: 593 RAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVL 652

Query: 646 LSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSK 705
           LSN+Y+  G WE    VR L + RG++K PG S +E + ++ +F + ++ HP   +IYS+
Sbjct: 653 LSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSE 712

Query: 706 IDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKN 765
           +  +   +K  GYVPD NF L +VE++ KE  L  HSE+LA+AFG+++ P    ++IFKN
Sbjct: 713 LRNLTAKMKSIGYVPDYNFVLQDVEDDEKENILTSHSERLAMAFGIISTPPKTTLQIFKN 772

Query: 766 LRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           LRVCGDCH A K+IS +  R II+RDSNRFHHFK G CSCGDYW
Sbjct: 773 LRVCGDCHNATKFISKITEREIIVRDSNRFHHFKDGVCSCGDYW 816



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 218/471 (46%), Gaps = 45/471 (9%)

Query: 228 VEGVESN--QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           ++GVE+   +  F  I   C  V       Q+H  ++ SG   ++++ + LI+ YA  GD
Sbjct: 34  LDGVENEKREIDFNRIFLYCTKVH---LAKQLHALLVVSGKTQSIFLSAKLINRYAFLGD 90

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD-IKIDDFTYPSVLN 344
           +  AR   +  +  +  +WNSMI  +AR G    A+  F +  +   ++ D +T+P V+ 
Sbjct: 91  IPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIR 150

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
                 +L++ + VH L++K GFE   ++  + I  Y++ G +  A  +F+ M  +D+ +
Sbjct: 151 ACG---NLDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGT 207

Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
           W ++I+G   +G   EAL+ F +MR   +  D V +SS+L  C +L  +  G  +H   +
Sbjct: 208 WNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAI 267

Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ 524
           K G    L V N+L+ +YAK G +  A  +F+ M  RD+++W +L+    QN K   AL 
Sbjct: 268 KLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALG 327

Query: 525 FYDQMLARGTKPDYITFVGLLFACSHAGLAENAR----------WYF------------- 561
            Y++M + G  PD +T V L    +  G   ++R          W+              
Sbjct: 328 VYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMY 387

Query: 562 ------ESMDKVYGIKPGPD--HYACMIDLLGRSGKLIEAKALLDQMV----GEPDATVW 609
                 +S  KV+   P  D   +  +I    ++G   EA  +   M       P+   W
Sbjct: 388 AKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTW 447

Query: 610 KALLSACRVHGDLELGERAANNLFE-LEPMNAMPYVQLSNMYSTAGKWEDA 659
            ++L+A    G L+ G +A   L +     +      L +MY   GK  DA
Sbjct: 448 VSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADA 498



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 120/494 (24%), Positives = 212/494 (42%), Gaps = 103/494 (20%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           L  A++D ++  G ID A ++FE +  +D  +WN++I  Y+ +G   EA  ++       
Sbjct: 379 LGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVY------- 431

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
               SS+ Y YS                  G  P+Q T  ++L   S  G L++G + HG
Sbjct: 432 ----SSMRY-YS------------------GAVPNQGTWVSILTAHSQLGALKQGMKAHG 468

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
             IK     + FV T LVDMY KC  + +A  LF   P  ++ V+W  +I+ +  +GYG 
Sbjct: 469 QLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPH-QSSVSWNAIISCHGLHGYGL 527

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSAL 276
           KA++ F++M+ EGV+ +  TF S+L+AC+     D G      +  + G   ++     +
Sbjct: 528 KAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCM 587

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           +D++ + G L+ A   ++   +  +VS    ++G  R                       
Sbjct: 588 VDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACR----------------------- 624

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
                       N++L    S H L V++   GY  +   L ++YAK G+ +    V +L
Sbjct: 625 ---------IHENVELVRTVSDHLLKVESENVGYYVL---LSNIYAKLGHWEGVDEVRSL 672

Query: 397 MQD---KDVISWTSL---------ITGCAYHGS----YEEALKYFSDMRISGICPDHVVV 440
            +D   K    W+S+          TG   H      Y E     + M+  G  PD+  V
Sbjct: 673 ARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNLTAKMKSIGYVPDYNFV 732

Query: 441 ---------SSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
                     +IL++ +E   + FG       + +   ++L +  +L +    CG  ++A
Sbjct: 733 LQDVEDDEKENILTSHSERLAMAFG------IISTPPKTTLQIFKNLRV----CGDCHNA 782

Query: 492 NRVFDSMHTRDVIT 505
            +    +  R++I 
Sbjct: 783 TKFISKITEREIIV 796


>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 674

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 239/633 (37%), Positives = 384/633 (60%), Gaps = 24/633 (3%)

Query: 201 VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
           +AW  +I  Y+ +G    ++  F  +R  G+  ++  FPS+L A       +    +H  
Sbjct: 42  LAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAA 101

Query: 261 ILSSGFEANVYVQSALIDMYAK----------------------CGDLDSARRLLEYSEI 298
           ++  GF  ++Y  +AL++MY+K                         +DS R+L +   +
Sbjct: 102 VIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPV 161

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
            + VSWN++I G A+ G ++EAL++ K+M   +++ D FT  S+L  F  + ++   K +
Sbjct: 162 RDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEI 221

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           H   ++ GF+   F+ ++LIDMYAK   ++ +   F+L+ ++D ISW S+I GC  +G +
Sbjct: 222 HGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRF 281

Query: 419 EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSL 478
           ++ L +F  M    + P  V  SS++ ACA LT L  G+Q+HA  ++ G   +  + +SL
Sbjct: 282 DQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSL 341

Query: 479 VLVYAKCGCINDANRVFDS--MHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           + +YAKCG I  A  +F+   M  RD+++WTA+IMGCA +G   +A+  +++ML  G KP
Sbjct: 342 LDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKP 401

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
            Y+ F+ +L ACSHAGL +    YF SM + +G+ PG +HYA + DLLGR+G+L EA   
Sbjct: 402 CYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDF 461

Query: 597 LDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
           +  M  EP  +VW  LL+ACR H ++EL E+  N +  ++P N   +V +SN+YS A +W
Sbjct: 462 ISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQRW 521

Query: 657 EDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA 716
            DAA++R  M+  G++K P CSW+E  ++VH F++ D+ HP    I   ++ ++  +++ 
Sbjct: 522 RDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKE 581

Query: 717 GYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAM 776
           GYV D N  LH+V+EE K   L  HSE+LA+AFG+++   G  IR+ KN+RVC DCHTA+
Sbjct: 582 GYVLDTNEVLHDVDEEHKRDLLRTHSERLAIAFGIISTTSGTTIRVIKNIRVCVDCHTAI 641

Query: 777 KYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           K+++ +  R II+RD++RFHHFK G+CSCGDYW
Sbjct: 642 KFMAKIVGREIIVRDNSRFHHFKNGSCSCGDYW 674



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 235/465 (50%), Gaps = 47/465 (10%)

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
           S ++   +KLF+  P ++  +W+++I G +  G+  EA  +  +M  E  RP  +TL ++
Sbjct: 146 SVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSI 205

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKN 199
           L + +    + +G++ HGYAI+  FD + F+ + L+DMYAKC  +  +   F +  + ++
Sbjct: 206 LPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSN-RD 264

Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG 259
            ++W ++I G  QNG   + +  FR M  E V+  Q +F S++ ACA ++A + G Q+H 
Sbjct: 265 AISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHA 324

Query: 260 CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI--DNEVSWNSMIVGFARQGFH 317
            I+  GF+ N ++ S+L+DMYAKCG++  AR +    E+   + VSW ++I+G A  G  
Sbjct: 325 YIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHA 384

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLI----VKTGFEGYKF 372
            +A+SLF++M    +K     + +VL  C  + +     K  +S+     V  G E Y  
Sbjct: 385 LDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYA- 443

Query: 373 VNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI- 430
              A+ D+  + G L+ A+  + N+ ++     W++L+  C  H + E A K  + + + 
Sbjct: 444 ---AVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLV 500

Query: 431 -SGICPDHVVVSSILSA------CAELTV---------------LEFGQQVHAVFLKSGG 468
             G    HV++S+I SA       A+L V               +E G +VH     +G 
Sbjct: 501 DPGNMGAHVIMSNIYSAAQRWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFL--AGD 558

Query: 469 CSSLSVD------NSLVLVYAKCGCINDANRVF---DSMHTRDVI 504
            S    D      N L+    K G + D N V    D  H RD++
Sbjct: 559 KSHPYYDKINEALNILLEQMEKEGYVLDTNEVLHDVDEEHKRDLL 603



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/348 (25%), Positives = 167/348 (47%), Gaps = 32/348 (9%)

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           + ++W  +I  +A  G  + +L+ F  + +  I  D   +PS+L         N A+S+H
Sbjct: 40  HSLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLH 99

Query: 360 SLIVKTGFEGYKFVNNALIDMYAK----------------------QGNLDCAFMVFNLM 397
           + +++ GF    +  NAL++MY+K                         +D    +F+ M
Sbjct: 100 AAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRM 159

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
             +DV+SW ++I G A +G YEEAL    +M    + PD   +SSIL    E   +  G+
Sbjct: 160 PVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGK 219

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
           ++H   ++ G    + + +SL+ +YAKC  +  +   F  +  RD I+W ++I GC QNG
Sbjct: 220 EIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNG 279

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH- 576
           +  + L F+ +ML    KP  ++F  ++ AC+H       +         Y I+ G D  
Sbjct: 280 RFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQL-----HAYIIRLGFDDN 334

Query: 577 ---YACMIDLLGRSGKLIEAKALLDQM-VGEPDATVWKALLSACRVHG 620
               + ++D+  + G +  A+ + +++ + + D   W A++  C +HG
Sbjct: 335 KFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHG 382



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 115/228 (50%), Gaps = 2/228 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D+D F  +++I  YA   ++  +   F+    ++  +W+S+I G    G   +    F +
Sbjct: 231 DKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRR 290

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M  E  +P Q +  +V+  C+    L  G+Q H Y I+  FD N F+ + L+DMYAKC  
Sbjct: 291 MLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGN 350

Query: 184 IFEAEYLF-KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
           I  A Y+F K+    ++ V+WT +I G + +G+   A+  F +M V+GV+     F ++L
Sbjct: 351 IKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVL 410

Query: 243 TACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSA 289
           TAC+     D G +    +    G    +   +A+ D+  + G L+ A
Sbjct: 411 TACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEA 458


>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
          Length = 886

 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 286/798 (35%), Positives = 436/798 (54%), Gaps = 61/798 (7%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           ++A+Y   G  ++A  +           W+ L+  +   G    A  +  +M   G +P 
Sbjct: 89  VVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPD 148

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF- 191
            +TL   L+ C        G   HG      F+ N FV   LV MY++C  + +A  +F 
Sbjct: 149 HFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFD 208

Query: 192 KMFPDGKNHV-AWTTMITGYSQNGYGFKAIECFRDM------RVEGVESNQFTFPSILTA 244
           ++   G + V +W +++  + +      A+E F +M      +     S+  +  +IL A
Sbjct: 209 EITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPA 268

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           CA++ A     ++H   + +G  A+ +V +ALID YAKCG ++ A ++    E  + VSW
Sbjct: 269 CASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSW 328

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL------NCFASNIDL------ 352
           N+M+ G+ + G    A  LF+ M   +I +D  T+ +V+       C    +D       
Sbjct: 329 NAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMIL 388

Query: 353 ----NNAKSVHSLI--------VKTGFEGYKF-----------------------VNNAL 377
                N+ ++ SL+        +  G E + +                       V NAL
Sbjct: 389 DGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNAL 448

Query: 378 IDMYAKQGNLDCAFMVFNLM--QDKDVISWTSLITGCAYHGSYEEALKYFSDM--RISGI 433
           IDMY+K  +   A  +F+ +  ++++V++WT +I G A +G   +ALK FS+M  +   +
Sbjct: 449 IDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAV 508

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG--CSSLSVDNSLVLVYAKCGCINDA 491
            P+   +S IL ACA L  L  G+Q+HA   +      S   V N L+ +Y+KCG ++ A
Sbjct: 509 APNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTA 568

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
             VFDSM  R+ ++WT+++ G   +G+GKEAL  +D+M   G  PD I+F+ LL+ACSH+
Sbjct: 569 RNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHS 628

Query: 552 GLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKA 611
           G+ +    YF+ M + Y +    +HYAC+IDLL R G+L +A   + +M  EP A +W A
Sbjct: 629 GMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVA 688

Query: 612 LLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
           LLSACRVH ++EL E A N L  ++  N   Y  +SN+Y+ A +W+D AR+R+LMK  GI
Sbjct: 689 LLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGI 748

Query: 672 RKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEE 731
           +K PGCSWV+       F   DR HPL  +IYS ++ ++  IK  GYVP+ NFALH+V++
Sbjct: 749 KKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHDVDD 808

Query: 732 EGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRD 791
           E K   L+ HSEKLA+A+GLLT   G PIRI KNLRVCGDCH+A  YIS +    II+RD
Sbjct: 809 EEKNNLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEIIVRD 868

Query: 792 SNRFHHFKAGNCSCGDYW 809
           S+RFHHFK G+CSCG YW
Sbjct: 869 SSRFHHFKNGSCSCGGYW 886



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 135/415 (32%), Positives = 206/415 (49%), Gaps = 46/415 (11%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF-- 98
           AL+D ++  G +++A ++F  M  +D  +WN M+  Y  SG    A +LF     +N   
Sbjct: 299 ALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPL 358

Query: 99  --FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
              TWS++I GY+  G   EA + F QM L+G  P+  T+ ++L  C+  G L +G + H
Sbjct: 359 DVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIH 418

Query: 157 GYAIKTCF------------DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP-DGKNHVAW 203
            Y++K C               +  V   L+DMY+KC+    A  +F   P   +N V W
Sbjct: 419 AYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTW 478

Query: 204 TTMITGYSQNGYGFKAIECFRDM--RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI 261
           T MI GY+Q G    A++ F +M  +   V  N +T   IL ACA ++A   G Q+H  +
Sbjct: 479 TVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYV 538

Query: 262 LSSG-FEANVY-VQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKE 319
                +E +VY V + LIDMY+KCGD+D+AR + +     NEVSW SM+ G+   G  KE
Sbjct: 539 TRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKE 598

Query: 320 ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF-------EGYKF 372
           AL +F KM       DD ++  +L  +A +         HS +V  G          Y  
Sbjct: 599 ALDIFDKMQKAGFVPDDISFLVLL--YACS---------HSGMVDQGLNYFDIMRRDYDV 647

Query: 373 VNNA-----LIDMYAKQGNLDCAFMVFNLM-QDKDVISWTSLITGCAYHGSYEEA 421
           V +A     +ID+ A+ G LD A+     M  +   + W +L++ C  H + E A
Sbjct: 648 VASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELA 702



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 194/437 (44%), Gaps = 64/437 (14%)

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
           + ++  Y  CG    A  +LE       V WN ++    ++G    A+ +  +M     K
Sbjct: 87  TGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTK 146

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
            D FT P  L            +++H LI   GFE   FV NAL+ MY++ G+L+ A +V
Sbjct: 147 PDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLV 206

Query: 394 FNLMQDK---DVISWTSLITGCAYHGSYEEALKYFSDM------RISGICPDHVVVSSIL 444
           F+ +  K   DVISW S++       +   AL+ FS+M      + +    D + + +IL
Sbjct: 207 FDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNIL 266

Query: 445 SACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR--- 501
            ACA L  L   +++H+  +++G  +   V N+L+  YAKCG +NDA +VF+ M  +   
Sbjct: 267 PACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVV 326

Query: 502 --------------------------------DVITWTALIMGCAQNGKGKEALQFYDQM 529
                                           DVITW+A+I G AQ G  +EAL  + QM
Sbjct: 327 SWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQM 386

Query: 530 LARGTKPDYITFVGLLFACSHAG-LAENARWYFESMDKVY----------GIKPGPDHYA 578
           +  G++P+ +T + LL AC+  G L++    +  S+ K            G       Y 
Sbjct: 387 ILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYN 446

Query: 579 CMIDLLGRSGKLIEAKALLDQMV-GEPDATVWKALLSACRVHGDLELGERAANNLFEL-E 636
            +ID+  +      A+++ D +   E +   W  ++     +GD       +N+  ++  
Sbjct: 447 ALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGD-------SNDALKIFS 499

Query: 637 PMNAMPYVQLSNMYSTA 653
            M + PY    N Y+ +
Sbjct: 500 EMISKPYAVAPNAYTIS 516



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 119/277 (42%), Gaps = 23/277 (8%)

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
           K +   ++  Y   G    A  V   +     + W  L+      G  + A+     M  
Sbjct: 83  KSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLR 142

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
           +G  PDH  +   L AC EL     G+ +H +   +G  S++ V N+LV +Y++CG + D
Sbjct: 143 AGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLED 202

Query: 491 ANRVFDSMHTR---DVITWTALIMGCAQNGKGKEALQFYDQM------LARGTKPDYITF 541
           A+ VFD +  +   DVI+W +++    +    + AL+ + +M       A   + D I+ 
Sbjct: 203 ASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISI 262

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPG--PDHYAC--MIDLLGRSGKLIEAKALL 597
           V +L AC+        +         Y I+ G   D + C  +ID   + G + +A  + 
Sbjct: 263 VNILPACASLKALPQIKEIHS-----YAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVF 317

Query: 598 DQMVGEPDATVWKALLSACRVHGDLELGERAANNLFE 634
           + M  + D   W A+++     G+      AA  LFE
Sbjct: 318 NVMEFK-DVVSWNAMVTGYTQSGNFG----AAFELFE 349


>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
 gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
          Length = 784

 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 276/754 (36%), Positives = 420/754 (55%), Gaps = 22/754 (2%)

Query: 59  FEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAF 118
           F+ ++  +       +  +  SG +  A  +F +    + F W+ +I GY+N GL  EA 
Sbjct: 50  FKPLARPNDLNITRDLCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAI 109

Query: 119 ELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMY 178
           + +++M+ EG R   +T   V++ C     L  G++ HG  IK  FDL+ +V   L+DMY
Sbjct: 110 DFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMY 169

Query: 179 AKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTF 238
            K   I  AE +F   P  ++ V+W +M++GY  +G G  ++ CF++M   G ++++F  
Sbjct: 170 LKIGFIELAEKVFDEMP-VRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGM 228

Query: 239 PSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI 298
            S L AC+       G ++H  ++ S  E ++ VQ++LIDMY KCG +D A R+      
Sbjct: 229 ISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYS 288

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD-FTYPSVLNCFASNIDLNNAKS 357
            N V+WN+MI G                M   D  I D  T  ++L   + +  L   KS
Sbjct: 289 KNIVAWNAMIGG----------------MQEDDKVIPDVITMINLLPSCSQSGALLEGKS 332

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           +H   ++  F  Y  +  AL+DMY K G L  A  VFN M +K+++SW +++     +  
Sbjct: 333 IHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQ 392

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
           Y+EALK F  +    + PD + ++S+L A AEL     G+Q+H+  +K G  S+  + N+
Sbjct: 393 YKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNA 452

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
           +V +YAKCG +  A   FD M  +DV++W  +IM  A +G G+ ++QF+ +M  +G KP+
Sbjct: 453 IVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPN 512

Query: 538 YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALL 597
             TFV LL ACS +GL +    +F SM   YGI PG +HY CM+DLLGR+G L EAK  +
Sbjct: 513 GSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFI 572

Query: 598 DQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWE 657
           ++M   P A +W +LL+A R H D+ L E AA ++  L+  N   YV LSNMY+ AG+WE
Sbjct: 573 EEMPLVPTARIWGSLLAASRNHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWE 632

Query: 658 DAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAG 717
           D  R++ LMK +G+ K  GCS V+ N +   FI++DR H     IY  +D ++  I E  
Sbjct: 633 DVDRIKYLMKEQGLVKTVGCSMVDINGRSESFINQDRSHAHTNLIYDVLDILLKKIGEDI 692

Query: 718 YVPDMN--FALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
           Y+  +     L   ++ G      YHS KLA+ FGL++   G P+ + KN R+C DCH A
Sbjct: 693 YLHSLTKFRPLDVAKKRGNSP--EYHSVKLAICFGLISTAIGNPVIVRKNTRICDDCHRA 750

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            K IS V  R I++ D+  FHHF+ G CSC DYW
Sbjct: 751 AKKISQVTKREIVVGDAKVFHHFRDGCCSCRDYW 784



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/393 (31%), Positives = 202/393 (51%), Gaps = 16/393 (4%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G+L +   D D +  N +I  Y   G +  A+K+F+E P ++  +W+S++ GY   G  +
Sbjct: 148 GKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGL 207

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
            +   F +M   G +  ++ + + L  CS++  L+ G + H   I++  +L+  V T L+
Sbjct: 208 SSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLI 267

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMY KC  +  AE +F      KN VAW  MI G  ++               + V  + 
Sbjct: 268 DMYGKCGKVDYAERVFNRIY-SKNIVAWNAMIGGMQED---------------DKVIPDV 311

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            T  ++L +C+   A   G  +HG  +   F   + +++AL+DMY KCG+L  A  +   
Sbjct: 312 ITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQ 371

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               N VSWN+M+  + +   +KEAL +F+ +    +K D  T  SVL   A     +  
Sbjct: 372 MNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEG 431

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           K +HS I+K G     F++NA++ MYAK G+L  A   F+ M  KDV+SW ++I   A H
Sbjct: 432 KQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIH 491

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
           G    ++++FS+MR  G  P+     S+L+AC+
Sbjct: 492 GFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACS 524



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 122/265 (46%), Gaps = 40/265 (15%)

Query: 35  PASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNET 93
           P   L  ALVD +   GE+  A  +F +M++++  +WNTM+AAY  + + +EA K+F   
Sbjct: 344 PYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQ-- 401

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE 153
                                         +  E  +P   T+ +VL   +       G+
Sbjct: 402 -----------------------------HILNEPLKPDAITIASVLPAVAELASRSEGK 432

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG---KNHVAWTTMITGY 210
           Q H Y +K     N F+   +V MYAKC  +  A   F    DG   K+ V+W TMI  Y
Sbjct: 433 QIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFF----DGMVCKDVVSWNTMIMAY 488

Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI-LSSGFEAN 269
           + +G+G  +I+ F +MR +G + N  TF S+LTAC+     D G      + +  G +  
Sbjct: 489 AIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPG 548

Query: 270 VYVQSALIDMYAKCGDLDSARRLLE 294
           +     ++D+  + G+LD A+  +E
Sbjct: 549 IEHYGCMLDLLGRNGNLDEAKCFIE 573


>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
 gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 273/742 (36%), Positives = 421/742 (56%), Gaps = 15/742 (2%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLD---IEAFELFWQMQLEGY 129
           ++  Y   G +  A+  F+    ++ + W+ +I GY   G     I  F LF  M   G 
Sbjct: 92  LVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF--MLSSGL 149

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
            P   T  +VL+ C     +  G + H  A+K  F  + +V   L+ +Y++ K +  A  
Sbjct: 150 TPDYRTFPSVLKACRT---VIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARI 206

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           LF   P  ++  +W  MI+GY Q+G   +A+     +R      +  T  S+L+AC    
Sbjct: 207 LFDEMPV-RDMGSWNAMISGYCQSGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAG 261

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
             + G  +H   +  G E+ ++V + LID+YA+ G L   +++ +   + + +SWNS+I 
Sbjct: 262 DFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIK 321

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG-FE 368
            +        A+SLF++M    I+ D  T  S+ +  +   D+   +SV    ++ G F 
Sbjct: 322 AYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFL 381

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
               + NA++ MYAK G +D A  VFN + + DVISW ++I+G A +G   EA++ ++ M
Sbjct: 382 EDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIM 441

Query: 429 RISG-ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
              G I  +     S+L AC++   L  G ++H   LK+G    + V  SL  +Y KCG 
Sbjct: 442 EEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGR 501

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           + DA  +F  +   + + W  LI     +G G++A+  + +ML  G KPD+ITFV LL A
Sbjct: 502 LEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSA 561

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
           CSH+GL +  +W FE M   YGI P   HY CM+D+ GR+G+L  A   +  M  +PDA+
Sbjct: 562 CSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDAS 621

Query: 608 VWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
           +W ALLSACRVHG+++LG+ A+ +LFE+EP +   +V LSNMY++AGKWE    +R +  
Sbjct: 622 IWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAH 681

Query: 668 SRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALH 727
            +G+RK PG S +E +++V +F + ++ HP+  ++Y ++  +   +K  GYVPD  F L 
Sbjct: 682 GKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQ 741

Query: 728 NVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHI 787
           +VE++ KE  L  HSE+LA+AF L+  P    IRIFKNLRVCGDCH+  K+IS +  R I
Sbjct: 742 DVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREI 801

Query: 788 ILRDSNRFHHFKAGNCSCGDYW 809
           I+RDSNRFHHFK G CSCGDYW
Sbjct: 802 IVRDSNRFHHFKNGVCSCGDYW 823



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 227/467 (48%), Gaps = 28/467 (5%)

Query: 67  GFTWNTMIAA-----YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELF 121
           GF W+  +AA     Y+    +  A+ LF+E P ++  +W+++I GY   G   EA  L 
Sbjct: 180 GFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLS 239

Query: 122 WQMQLEGYRP-SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK 180
                 G R     T+ ++L  C+  G   RG   H Y+IK   +   FV   L+D+YA+
Sbjct: 240 -----NGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE 294

Query: 181 ------CKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
                 C+ +F+  Y+       ++ ++W ++I  Y  N    +AI  F++MR+  ++ +
Sbjct: 295 FGRLRDCQKVFDRMYV-------RDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPD 347

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSG-FEANVYVQSALIDMYAKCGDLDSARRLL 293
             T  S+ +  + +        V G  L  G F  ++ + +A++ MYAK G +DSAR + 
Sbjct: 348 CLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVF 407

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR-DIKIDDFTYPSVLNCFASNIDL 352
            +    + +SWN++I G+A+ GF  EA+ ++  M    +I  +  T+ SVL   +    L
Sbjct: 408 NWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGAL 467

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
                +H  ++K G     FV  +L DMY K G L+ A  +F  +   + + W +LI   
Sbjct: 468 RQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACH 527

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-S 471
            +HG  E+A+  F +M   G+ PDH+   ++LSAC+   +++ GQ    +     G + S
Sbjct: 528 GFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPS 587

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNG 517
           L     +V +Y + G +  A +   SM  + D   W AL+  C  +G
Sbjct: 588 LKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHG 634



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 213/442 (48%), Gaps = 17/442 (3%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N +I  YA  GRLR+ +K+F+    ++  +W+S+I  Y      + A  LF +M+L 
Sbjct: 283 FVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS 342

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV-TGLVDMYAKCKCIFE 186
             +P   TL ++  + S  G ++      G+ ++  + L    +   +V MYAK   +  
Sbjct: 343 RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS 402

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTAC 245
           A  +F   P+  + ++W T+I+GY+QNG+  +AIE +  M  EG + +NQ T+ S+L AC
Sbjct: 403 ARAVFNWLPN-TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPAC 461

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           +   A   G ++HG +L +G   +V+V ++L DMY KCG L+ A  L       N V WN
Sbjct: 462 SQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWN 521

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVK 364
           ++I      G  ++A+ LFK+M    +K D  T+ ++L+ C  S +          +   
Sbjct: 522 TLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTD 581

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALK 423
            G          ++DMY + G L+ A      M    D   W +L++ C  HG+ +  L 
Sbjct: 582 YGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVD--LG 639

Query: 424 YFSDMRISGICPDHVVVSSIL-----SACAELTVLEFGQQVHAVFL-KSGGCSSLSVDNS 477
             +   +  + P+HV    +L     SA     V E     H   L K+ G SS+ VDN 
Sbjct: 640 KIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNK 699

Query: 478 LVLVYAKCGCINDANRVFDSMH 499
           + + Y      N  + +++ M+
Sbjct: 700 VEVFYTG----NQTHPMYEEMY 717



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 175/420 (41%), Gaps = 87/420 (20%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +V ++  G +D A  +F  + + D  +WNT+I+ YA +G   EA +++N        
Sbjct: 388 NAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYN-------- 439

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
                                   M+ EG    +Q T  +VL  CS  G L++G + HG 
Sbjct: 440 -----------------------IMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGR 476

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFK 218
            +K    L+ FVVT L DMY KC  + +A  LF   P   N V W T+I  +  +G+G K
Sbjct: 477 LLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR-VNSVPWNTLIACHGFHGHGEK 535

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALI 277
           A+  F++M  EGV+ +  TF ++L+AC+     D G      + +  G   ++     ++
Sbjct: 536 AVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMV 595

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           DMY + G L++A + ++   +  + S W +++      G                     
Sbjct: 596 DMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHG--------------------- 634

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
                       N+DL    S H   V+    GY  +   L +MYA  G  +    + ++
Sbjct: 635 ------------NVDLGKIASEHLFEVEPEHVGYHVL---LSNMYASAGKWEGVDEIRSI 679

Query: 397 MQDKDV---ISWTSL---------ITGCAYHGSYEEALKYFS----DMRISGICPDHVVV 440
              K +     W+S+          TG   H  YEE  +  +     +++ G  PDH  V
Sbjct: 680 AHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFV 739



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 144/284 (50%), Gaps = 15/284 (5%)

Query: 333 KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM 392
           +IDD     V   F    +L +AK +H+ +V +       ++  L+++Y   GN+  A  
Sbjct: 53  EIDD-----VHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARH 107

Query: 393 VFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD-MRISGICPDHVVVSSILSACAELT 451
            F+ +Q++DV +W  +I+G    G+  E ++ FS  M  SG+ PD+    S+L AC   T
Sbjct: 108 TFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR--T 165

Query: 452 VLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIM 511
           V++ G ++H + LK G    + V  SL+ +Y++   + +A  +FD M  RD+ +W A+I 
Sbjct: 166 VID-GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMIS 224

Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIK 571
           G  Q+G  KEAL   + + A     D +T V LL AC+ AG   N      S    +G++
Sbjct: 225 GYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAG-DFNRGVTIHSYSIKHGLE 279

Query: 572 PGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
                   +IDL    G+L + + + D+M    D   W +++ A
Sbjct: 280 SELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR-DLISWNSIIKA 322



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 9/225 (4%)

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
           T L+  + +HA  + S    ++ +   LV +Y   G +  A   FD +  RDV  W  +I
Sbjct: 65  TNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMI 124

Query: 511 MGCAQNGKGKEALQFYDQ-MLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG 569
            G  + G   E ++ +   ML+ G  PDY TF  +L AC    + +  + +  ++   +G
Sbjct: 125 SGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR--TVIDGNKIHCLALK--FG 180

Query: 570 IKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAA 629
                   A +I L  R   +  A+ L D+M    D   W A++S     G+ +     +
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVR-DMGSWNAMISGYCQSGNAKEALTLS 239

Query: 630 NNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
           N    L  M+++  V L +  + AG +     +       G+  E
Sbjct: 240 NG---LRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESE 281


>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
 gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
          Length = 787

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 273/744 (36%), Positives = 431/744 (57%), Gaps = 4/744 (0%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKN-FFTWSSLIYGYSNYGLDIEAFELFWQMQL 126
           F  N++++ YA    +  A+KLF+    +N   +W+S+I  YS  G  +EA  LF +MQ 
Sbjct: 46  FVANSLVSMYAKCNDILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQK 105

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
            G   + YTL   L+ C      + G + H   +K+   L+ +V   LV M+ +   +  
Sbjct: 106 AGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSY 165

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A  +F    D K+++ W +MI G++QNG   +A++ F  ++   ++ ++ +  SIL A  
Sbjct: 166 AARIFDEL-DEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASG 224

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            +     G ++H   + +  ++N+ + + LIDMY+KC  +  A  + +     + +SW +
Sbjct: 225 RLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTT 284

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           +I  +A+   H EAL L +K+  + + +D     S L   +    L++AK VH   +K G
Sbjct: 285 VIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRG 344

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
                 + N +ID+YA  GN++ A  +F  ++ KDV+SWTS+I+   ++G   EAL  F 
Sbjct: 345 LSDL-MMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFY 403

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
            M+ + + PD + + SILSA A L+ L  G+++H    + G     S  NSLV +YA CG
Sbjct: 404 LMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCG 463

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
            + +A +VF    ++ ++ WT +I     +G+GK A++ +  M  +   PD+ITF+ LL+
Sbjct: 464 SLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLY 523

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ACSH+GL    +   E+M   Y ++P P+HYAC++DLLGR+  L EA   +  M  EP A
Sbjct: 524 ACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTA 583

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
            VW A L ACR+H + +LGE AA  L +L+P +   YV +SN+++ +G+W+D   VR  M
Sbjct: 584 EVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRM 643

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIM-LLIKEAGYVPDMNFA 725
           K  G++K PGCSW+E  ++VH F+  D+ HP    IY K+ +I   L KE GYVP     
Sbjct: 644 KGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQKLAQITEKLEKEGGYVPQTKLV 703

Query: 726 LHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLR 785
           LHNV +E K   L  HSE+LA+A+GL++  +G PIRI KNLRVC DCHT  K +S  + R
Sbjct: 704 LHNVGKEEKVQMLYGHSERLAIAYGLMSTSEGTPIRITKNLRVCVDCHTFCKLVSKFFER 763

Query: 786 HIILRDSNRFHHFKAGNCSCGDYW 809
            +I+RD++RFHHF+ G CSCGD+W
Sbjct: 764 ELIVRDASRFHHFEDGVCSCGDFW 787



 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 181/580 (31%), Positives = 281/580 (48%), Gaps = 38/580 (6%)

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M++ G     +T   VL+ C +   + RG + HG  IK  +D   FV   LV MYAKC  
Sbjct: 1   MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I  A  LF    +  + V+W ++I+ YS NG   +A+  FR+M+  GV +N +T  + L 
Sbjct: 61  ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC   S +  G ++H  IL S    +VYV +AL+ M+ + G +  A R+ +  +  + ++
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNIT 180

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WNSMI GF + G + EAL  F  +   ++K D+ +  S+L        L N K +H+  +
Sbjct: 181 WNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAM 240

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K   +    + N LIDMY+K   +  A +VF+ M +KD+ISWT++I   A +  + EALK
Sbjct: 241 KNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALK 300

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
               ++  G+  D +++ S L AC+ L  L   ++VH   LK  G S L + N ++ VYA
Sbjct: 301 LLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKR-GLSDLMMQNMIIDVYA 359

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
            CG IN A R+F+S+  +DV++WT++I     NG   EAL  +  M     +PD IT V 
Sbjct: 360 DCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVS 419

Query: 544 LLFACSHAGLAENAR----WYFESMDKVYG--IKPGPDHYAC------------------ 579
           +L A +        +    + F     + G  +    D YAC                  
Sbjct: 420 ILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKS 479

Query: 580 ------MIDLLGRSGKLIEAKALLDQMVGE---PDATVWKALLSACRVHGDLELGERAAN 630
                 MI+  G  G+   A  L   M  +   PD   + ALL AC   G +  G+R   
Sbjct: 480 LVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLE 539

Query: 631 NL---FELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
            +   ++LEP     Y  L ++   A   E+A    K M+
Sbjct: 540 TMKCKYQLEPWPE-HYACLVDLLGRANHLEEAYHFVKSMQ 578



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 123/394 (31%), Positives = 214/394 (54%), Gaps = 2/394 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +  N ++A +   G++  A ++F+E   K+  TW+S+I G++  GL  EA + F  +Q
Sbjct: 146 DVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQ 205

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
               +P + +L ++L      G L  G++ H YA+K   D N  +   L+DMY+KC C+ 
Sbjct: 206 DANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVA 265

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A  +F    + K+ ++WTT+I  Y+QN    +A++  R ++ +G++ +     S L AC
Sbjct: 266 YAGLVFDKMIN-KDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLAC 324

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           + +       +VHG  L  G  +++ +Q+ +ID+YA CG+++ A R+ E  +  + VSW 
Sbjct: 325 SGLRCLSHAKEVHGYTLKRGL-SDLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWT 383

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           SMI  +   G   EAL +F  M    ++ D  T  S+L+  AS   LN  K +H  I + 
Sbjct: 384 SMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRK 443

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           GF       N+L+DMYA  G+L+ A+ VF   + K ++ WT++I     HG  + A++ F
Sbjct: 444 GFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELF 503

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           S M    + PDH+   ++L AC+   ++  G+++
Sbjct: 504 SIMEDQKLIPDHITFLALLYACSHSGLINEGKRL 537



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 116/449 (25%), Positives = 205/449 (45%), Gaps = 44/449 (9%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           +   L+D +S    +  AG +F+KM ++D  +W T+IAAYA +    EA KL  +   K 
Sbjct: 250 IGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTK- 308

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                         G+D++                   + + L  CS    L   ++ HG
Sbjct: 309 --------------GMDVDTM----------------MIGSTLLACSGLRCLSHAKEVHG 338

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
           Y +K     +  +   ++D+YA C  I  A  +F+     K+ V+WT+MI+ Y  NG   
Sbjct: 339 YTLKRGLS-DLMMQNMIIDVYADCGNINYATRMFESIK-CKDVVSWTSMISCYVHNGLAN 396

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           +A+  F  M+   VE +  T  SIL+A A++SA + G ++HG I   GF       ++L+
Sbjct: 397 EALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLV 456

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
           DMYA CG L++A ++   +   + V W +MI  +   G  K A+ LF  M  + +  D  
Sbjct: 457 DMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHI 516

Query: 338 TYPSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
           T+ ++L  C  S +     + + ++  K   E +      L+D+  +  +L+ A+     
Sbjct: 517 TFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKS 576

Query: 397 MQDKDVIS-WTSLITGCAYHGSYEEALKYFSDMRISGICPD----HVVVSSILSACAELT 451
           MQ +     W + +  C  H +  + L   +  ++  + PD    +V++S++ +A     
Sbjct: 577 MQIEPTAEVWCAFLGACRIHSN--KKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWK 634

Query: 452 -VLEFGQQVHAVFLKSG-GCSSLSVDNSL 478
            V E   ++    LK   GCS + V N +
Sbjct: 635 DVEEVRMRMKGGGLKKNPGCSWIEVGNKV 663


>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Brachypodium distachyon]
          Length = 940

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 267/748 (35%), Positives = 422/748 (56%), Gaps = 5/748 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNET-PFKNFFTWSSLIYGYSNYGLDIEAFELFW 122
           DR  F  N +IA YA  G L  A ++F      ++  +W+S+I G    G+ ++A +LF 
Sbjct: 196 DRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFR 255

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
            MQ      + YT   VL++C+    L  G + H   +K+  ++N      L+ MY KC 
Sbjct: 256 GMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVN-IQCNALLVMYTKCG 314

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            +  A  +F+   D K++++W +M++ Y QNG   +AIE   +M   G + +     S+ 
Sbjct: 315 RVDSALRVFREI-DEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLS 373

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           +A   +     G +VH   +    +++  V + L+DMY KC  ++ +  + +   I + +
Sbjct: 374 SAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHI 433

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SW ++I  +A+   H EAL +F++     IK+D     S+L   +    +  AK +H   
Sbjct: 434 SWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYA 493

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           ++ G      V N +ID+Y + G +  +  +F  ++ KD+++WTS+I   A  G   EAL
Sbjct: 494 IRNGLLDL-VVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEAL 552

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
             F++M+ + + PD V + SIL A   L+ L  G++VH   ++       ++ +SLV +Y
Sbjct: 553 VLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMY 612

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
           + CG ++ A +VF+++  +D++ WTA+I     +G GK+A+  + +ML  G  PD+++F+
Sbjct: 613 SGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFL 672

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
            LL+ACSH+ L    + Y + M   Y ++P  +HYAC++DLLGRSG+  EA   +  M  
Sbjct: 673 ALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPL 732

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
           +P + VW +LL ACRVH + EL   AAN L ELEP N   YV +SN+++  GKW +A  V
Sbjct: 733 KPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEV 792

Query: 663 RKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIM-LLIKEAGYVPD 721
           R  +  RG+RK+P CSW+E  + VH F + D  H     I  K+ EI   L KE GY  D
Sbjct: 793 RARISERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLRKEGGYTED 852

Query: 722 MNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISA 781
               LH+V EE K   L  HSE+LA++FGL+    G P+RI KNLRVCGDCH   K +S 
Sbjct: 853 TRSVLHDVSEEEKVDVLHRHSERLAISFGLINTRPGMPLRIAKNLRVCGDCHEFTKLVSK 912

Query: 782 VYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           ++ R I++RD+NRFHHF  G+CSCGD+W
Sbjct: 913 LFDRDIVVRDANRFHHFSGGSCSCGDFW 940



 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 171/566 (30%), Positives = 298/566 (52%), Gaps = 23/566 (4%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           DGF    ++  Y   GR+ +A+ LF+    +  F+W++LI  Y + G   EA  ++  M+
Sbjct: 94  DGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMR 153

Query: 126 LE---GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           L    G  P   TL +VL+   ++G  + G + HG A+K   D + FV   L+ MYAKC 
Sbjct: 154 LSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCG 213

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            +  A  +F++  DG++  +W +MI+G  QNG   +A++ FR M+   +  N +T   +L
Sbjct: 214 ILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVL 273

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE- 301
             C  ++  + G ++H  +L SG E N+   +AL+ MY KCG +DSA R+  + EID + 
Sbjct: 274 QVCTELAQLNLGRELHAALLKSGSEVNIQC-NALLVMYTKCGRVDSALRV--FREIDEKD 330

Query: 302 -VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
            +SWNSM+  + + G + EA+    +M     + D     S+ +       L N K VH+
Sbjct: 331 YISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHA 390

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
             +K   +    V N L+DMY K   ++ +  VF+ M+ KD ISWT++IT  A    + E
Sbjct: 391 YAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIE 450

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
           AL+ F + +  GI  D +++ SIL AC+ L  +   +Q+H   +++ G   L V N ++ 
Sbjct: 451 ALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRN-GLLDLVVKNRIID 509

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           +Y +CG +  + ++F+++  +D++TWT++I   A +G   EAL  + +M +   +PD + 
Sbjct: 510 IYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVA 569

Query: 541 FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY------ACMIDLLGRSGKLIEAK 594
            V +L A    GL+  A+       +V+G     + +      + ++D+    G L  A 
Sbjct: 570 LVSILGAI--GGLSSLAKG-----KEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGAL 622

Query: 595 ALLDQMVGEPDATVWKALLSACRVHG 620
            + +  V   D  +W A+++A  +HG
Sbjct: 623 KVFNA-VKCKDMVLWTAMINATGMHG 647



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 159/499 (31%), Positives = 244/499 (48%), Gaps = 17/499 (3%)

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT--CFDLNAFVVTGLVDMYAKCK 182
           Q  G  P Q     VL L + K  + +G Q H +A+ T      + F+ T L+ MY KC 
Sbjct: 50  QTPGRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCG 109

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV---EGVESNQFTFP 239
            + +A  LF      +   +W  +I  Y  +G   +A+  +R MR+    GV  +  T  
Sbjct: 110 RVADARLLFDGM-SSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLA 168

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
           S+L A         G +VHG  +  G + + +V +ALI MYAKCG LDSA R+ E     
Sbjct: 169 SVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDG 228

Query: 300 NEV-SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
            +V SWNSMI G  + G   +AL LF+ M    + ++ +T   VL        LN  + +
Sbjct: 229 RDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGREL 288

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           H+ ++K+G E      NAL+ MY K G +D A  VF  + +KD ISW S+++    +G Y
Sbjct: 289 HAALLKSGSE-VNIQCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLY 347

Query: 419 EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSL 478
            EA+++ S+M   G  PDH  + S+ SA   L  L  G++VHA  +K    S   V N+L
Sbjct: 348 AEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTL 407

Query: 479 VLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDY 538
           + +Y KC  I  +  VFD M  +D I+WT +I   AQ+ +  EAL+ + +    G K D 
Sbjct: 408 MDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDP 467

Query: 539 ITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC---MIDLLGRSGKLIEAKA 595
           +    +L ACS  GL              Y I+ G         +ID+ G  G++  +  
Sbjct: 468 MMIGSILEACS--GLET---ILLAKQLHCYAIRNGLLDLVVKNRIIDIYGECGEVYHSLK 522

Query: 596 LLDQMVGEPDATVWKALLS 614
           +  + V + D   W ++++
Sbjct: 523 MF-ETVEQKDIVTWTSMIN 540



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 110/454 (24%), Positives = 205/454 (45%), Gaps = 49/454 (10%)

Query: 52  IDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNY 111
           I+ +  +F++M  +D  +W T+I  YA S R                             
Sbjct: 417 IEYSAHVFDRMRIKDHISWTTIITCYAQSSR----------------------------- 447

Query: 112 GLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV 171
              IEA E+F + Q EG +     + ++L  CS    +   +Q H YAI+    L+  V 
Sbjct: 448 --HIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGL-LDLVVK 504

Query: 172 TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV 231
             ++D+Y +C  ++ +  +F+   + K+ V WT+MI  Y+ +G   +A+  F +M+   V
Sbjct: 505 NRIIDIYGECGEVYHSLKMFETV-EQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDV 563

Query: 232 ESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR 291
           + +     SIL A   +S+   G +VHG ++   F     + S+L+DMY+ CG L  A +
Sbjct: 564 QPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALK 623

Query: 292 LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID 351
           +    +  + V W +MI      G  K+A+ LFK+M    +  D  ++ ++L   + +  
Sbjct: 624 VFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKL 683

Query: 352 LNNAKSVHSLIVKT-GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLI 409
           +N  K    +++ T   E ++     ++D+  + G  + A+     M  K   + W SL+
Sbjct: 684 VNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLL 743

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPD----HVVVSSILSACAELTVLEFGQQVHAVFLK 465
             C  H ++E  L   +  R+  + PD    +V+VS++    AE+      ++V A   +
Sbjct: 744 GACRVHKNHE--LAVVAANRLLELEPDNPGNYVLVSNVF---AEMGKWNNAKEVRARISE 798

Query: 466 SG-----GCSSLSVDNSLVLVYAKCGCINDANRV 494
            G      CS + + N++     +     DA R+
Sbjct: 799 RGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERI 832



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 84/332 (25%), Positives = 143/332 (43%), Gaps = 37/332 (11%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           NR +  +   GE+  + ++FE +  +D  TW +MI  YANSG L EA  LF E       
Sbjct: 505 NRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAE------- 557

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
                                   MQ    +P    L ++L        L +G++ HG+ 
Sbjct: 558 ------------------------MQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFL 593

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           I+  F +   +V+ LVDMY+ C  +  A  +F      K+ V WT MI     +G+G +A
Sbjct: 594 IRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAV-KCKDMVLWTAMINATGMHGHGKQA 652

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALID 278
           I+ F+ M   GV  +  +F ++L AC+     + G      ++S+   E      + ++D
Sbjct: 653 IDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVD 712

Query: 279 MYAKCGDLDSARRLLEYSEID-NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD- 336
           +  + G  + A   ++   +    V W S++        H+ A+    ++   +++ D+ 
Sbjct: 713 LLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRL--LELEPDNP 770

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
             Y  V N FA     NNAK V + I + G  
Sbjct: 771 GNYVLVSNVFAEMGKWNNAKEVRARISERGLR 802


>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
 gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 938

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 272/743 (36%), Positives = 428/743 (57%), Gaps = 7/743 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N++I  +   G + EA  +FNE   ++  +W+S+I   +   L  E+F  F  M+L    
Sbjct: 199 NSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEE 258

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            +  TL  +L +C     L+ G+  HG A+K   + N  +   L+ +Y+      +AE +
Sbjct: 259 INYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELI 318

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F+  P+ ++ ++W +M+  Y Q+G    A++ F +M     E N  TF S L AC     
Sbjct: 319 FRRMPE-RDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEF 377

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              G  +HG ++  G +  + + + LI  Y KC  +  A+++ +     ++V+WN++I G
Sbjct: 378 FTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGG 437

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID----LNNAKSVHSLIVKTG 366
           FA      EA++ FK M  R+       Y +++N   S +     +     +H+  V TG
Sbjct: 438 FANNAELNEAVAAFKLM--REGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTG 495

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
           F+  + V ++LI MYAK G+L  +  +F+ +  K    W ++I   A +G  EEALK   
Sbjct: 496 FDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVV 555

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
            MR +GI  D    S+ LS  A+L +LE GQQ+H   +K G      + N+ + +Y KCG
Sbjct: 556 RMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCG 615

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
            ++DA R+      R  ++W  LI   A++G+  +A + +  ML  G KP++++FV LL 
Sbjct: 616 ELDDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLS 675

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ACSH GL +    Y+ SM  VYGI+PG +H  CMIDLLGRSG+L+EA+A + +M   P+ 
Sbjct: 676 ACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPPND 735

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
            VW++LL++CR++ +L+LG +AA +L EL+P +   YV  SN+++T G+WED   VR  M
Sbjct: 736 LVWRSLLASCRIYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVFATIGRWEDVEDVRGQM 795

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFAL 726
            +  I+K+P  SWV+    + IF   D+ HP    I  K+  +M ++ EAGYVPD +++L
Sbjct: 796 GAHKIQKKPAHSWVKWKGNISIFGMGDQTHPQMEQINGKLLGLMKIVGEAGYVPDTSYSL 855

Query: 727 HNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRH 786
            + +EE KE  +  HSE++A+AFGL+ +P+G+ +RIFKNLRVCGDCH+  K++S V  R 
Sbjct: 856 QDTDEEQKEHNMWSHSERIALAFGLINIPEGSTVRIFKNLRVCGDCHSFFKFVSGVLGRK 915

Query: 787 IILRDSNRFHHFKAGNCSCGDYW 809
           I+LRD  RFHHF  GNCSC DYW
Sbjct: 916 IVLRDPYRFHHFTNGNCSCSDYW 938



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 162/556 (29%), Positives = 273/556 (49%), Gaps = 11/556 (1%)

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
           Y+  GR+  A+ +F+    +N  +W+ ++ GY   G  +EA   F  +   G +PS + +
Sbjct: 2   YSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMI 61

Query: 137 DNVLRLCSLKGLLQR-GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
            +++  C+   ++ + G QFHG+AIK     + FV T  V  YA    +  A+ +F   P
Sbjct: 62  ASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMP 121

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGA 255
           D +N V+WT+++  YS NG   + I  ++ MR EG+  N+     ++++C  +     G 
Sbjct: 122 D-RNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           Q+ G  L  G E  V   ++LI M+  CGD++ A  +       + +SWNS+I   A+  
Sbjct: 181 QLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNT 240

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID-LNNAKSVHSLIVKTGFEGYKFVN 374
            H+E+   F  M     +I ++T  S+L     ++D L   K VH L VK G E    + 
Sbjct: 241 LHEESFRYFHWMRLVHEEI-NYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLC 299

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           N L+ +Y+  G    A ++F  M ++D+ISW S++      G    ALK F++M      
Sbjct: 300 NTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKE 359

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
            ++V  +S L+AC +      G+ +H   +  G    L + N+L+  Y KC  + +A +V
Sbjct: 360 INYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKV 419

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP-DYITFVGLLFAC-SHAG 552
           F  M   D +TW ALI G A N +  EA+  +  M    T   DYIT V +L +C +H  
Sbjct: 420 FQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHED 479

Query: 553 LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
           L +       +   V G        + +I +  + G L  +  + DQ+V +  ++VW A+
Sbjct: 480 LIKYGI-PIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKT-SSVWNAI 537

Query: 613 LSACRVHGDLELGERA 628
           ++A   +G    GE A
Sbjct: 538 IAANARYG---FGEEA 550



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 160/618 (25%), Positives = 287/618 (46%), Gaps = 19/618 (3%)

Query: 30  GNSVKPASDLNRALVDFSNSGEI-DEAGQLFEKMSDRDGFTWNTMIAA-----YANSGRL 83
           G  +KP+  +  +LV   N   I  + G  F   + + G  ++  +       YA+ G +
Sbjct: 51  GIGIKPSGFMIASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIV 110

Query: 84  REAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLC 143
             A+K+FNE P +N  +W+SL+  YS+ G   E    + +M+ EG   ++  +  V+  C
Sbjct: 111 SNAQKMFNEMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSC 170

Query: 144 SLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAW 203
                +  G Q  G+A+K   +        L+ M+  C  I EA  +F    + ++ ++W
Sbjct: 171 GFLMDIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNE-RDTISW 229

Query: 204 TTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS 263
            ++I+  +QN    ++   F  MR+   E N  T   +L+ C +V    +G  VHG  + 
Sbjct: 230 NSIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVK 289

Query: 264 SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSL 323
            G E+N+ + + L+ +Y+  G    A  +       + +SWNSM+  + + G    AL +
Sbjct: 290 YGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKV 349

Query: 324 FKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK 383
           F +M     +I+  T+ S L          N K +H  +V  G +    + N LI  Y K
Sbjct: 350 FAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGK 409

Query: 384 QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR---ISGICPDHVVV 440
              +  A  VF  M   D ++W +LI G A +    EA+  F  MR    SG+  D++ +
Sbjct: 410 CHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGV--DYITI 467

Query: 441 SSILSAC-AELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH 499
            +IL +C     ++++G  +HA  + +G      V +SL+ +YAKCG ++ ++ +FD + 
Sbjct: 468 VNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLV 527

Query: 500 TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW 559
            +    W A+I   A+ G G+EAL+   +M + G + D   F   L   +   + E  + 
Sbjct: 528 FKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQ 587

Query: 560 YFESMDKVYGIKPGPDHYA--CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACR 617
              S  K+ G +   DH+     +D+ G+ G+L +A  +L Q       + W  L+S   
Sbjct: 588 LHGSTIKL-GFE--LDHFIINAAMDMYGKCGELDDALRILPQPTDRSRLS-WNTLISISA 643

Query: 618 VHGDLELGERAANNLFEL 635
            HG     +   +++ +L
Sbjct: 644 RHGQFHKAKETFHDMLKL 661



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 247/487 (50%), Gaps = 13/487 (2%)

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           MY+K   I  A+ +F    + +N  +W  M++GY + G   +A+  FRD+   G++ + F
Sbjct: 1   MYSKFGRINYAQLVFDRMSE-RNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGF 59

Query: 237 TFPSILTAC--AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
              S++TAC  +++ A++ G Q HG  +  G   +V+V ++ +  YA  G + +A+++  
Sbjct: 60  MIASLVTACNKSSIMAKE-GFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFN 118

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC--FASNIDL 352
                N VSW S++V ++  G  KE ++ +K+M    I  ++     V++   F  +I L
Sbjct: 119 EMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIIL 178

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
            +    H+L  K G E      N+LI M+   G+++ A  +FN M ++D ISW S+I+  
Sbjct: 179 GHQLLGHAL--KFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISAN 236

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
           A +  +EE+ +YF  MR+     ++  +S +LS C  +  L++G+ VH + +K G  S++
Sbjct: 237 AQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNI 296

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
            + N+L+ VY+  G   DA  +F  M  RD+I+W +++    Q+G+   AL+ + +ML  
Sbjct: 297 CLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWM 356

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIE 592
             + +Y+TF   L AC       N +        V G++        +I   G+  K+ E
Sbjct: 357 KKEINYVTFTSALAACLDPEFFTNGK-ILHGFVVVLGLQDELIIGNTLITFYGKCHKMAE 415

Query: 593 AKALLDQMVGEPDATVWKALLSACRVHGDLELGER-AANNLFELEPMNAMPYVQLSNMYS 651
           AK +  +M  + D   W AL+       + EL E  AA  L      + + Y+ + N+  
Sbjct: 416 AKKVFQRM-PKLDKVTWNALIGG--FANNAELNEAVAAFKLMREGSTSGVDYITIVNILG 472

Query: 652 TAGKWED 658
           +    ED
Sbjct: 473 SCLTHED 479



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 122/247 (49%), Gaps = 3/247 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D    +++I  YA  G L  +  +F++  FK    W+++I   + YG   EA +L  +
Sbjct: 497 DLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVR 556

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+  G    Q+     L + +   +L+ G+Q HG  IK  F+L+ F++   +DMY KC  
Sbjct: 557 MRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGE 616

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A  +    P  ++ ++W T+I+  +++G   KA E F DM   GV+ N  +F  +L+
Sbjct: 617 LDDALRILPQ-PTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLS 675

Query: 244 ACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI-DNE 301
           AC+     D G   +  + S  G +  +     +ID+  + G L  A   +    I  N+
Sbjct: 676 ACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPPND 735

Query: 302 VSWNSMI 308
           + W S++
Sbjct: 736 LVWRSLL 742


>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 269/745 (36%), Positives = 406/745 (54%), Gaps = 73/745 (9%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           DG     +++ YA  G L+E +++F+    KN + W+ ++  Y+  G             
Sbjct: 133 DGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG------------- 179

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
                      D    +C  K ++++G    G   ++ F+L                   
Sbjct: 180 -----------DFKESICLFKIMVEKG--IEGKRPESAFEL------------------- 207

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
                F    D ++ ++W +MI+GY  NG   + +  ++ M   G++ +  T  S+L  C
Sbjct: 208 -----FDKLCD-RDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGC 261

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A       G  VH   + S FE  +   + L+DMY+KCGDLD A R+ E     N VSW 
Sbjct: 262 ANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWT 321

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           SMI G+ R G    A+ L ++M    +K+D     S+L+  A +  L+N K VH  I   
Sbjct: 322 SMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKAN 381

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
             E   FV NAL+DMYAK G+++ A  VF+ M  KD+ISW ++I                
Sbjct: 382 NMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI---------------- 425

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
                  + PD   ++ +L ACA L+ LE G+++H   L++G  S   V N+LV +Y KC
Sbjct: 426 -----GELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKC 480

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G +  A  +FD + ++D+++WT +I G   +G G EA+  +++M   G +PD ++F+ +L
Sbjct: 481 GVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISIL 540

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
           +ACSH+GL E    +F  M   + I+P  +HYACM+DLL R+G L +A   ++ +   PD
Sbjct: 541 YACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPD 600

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
           AT+W ALL  CR + D+EL E+ A  +FELEP N   YV L+N+Y+ A KWE+  R+R+ 
Sbjct: 601 ATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREK 660

Query: 666 MKSRGIRKEPGCSWVETNSQVHIFIS-EDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
           +  +G+RK PGCSW+E   +V++F+S  +  HP   +I S + ++   +KE G+ P   +
Sbjct: 661 IGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKY 720

Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
           AL N +E  KE+ L  HSEKLA+AFGLLTLP    IR+ KNLRVCGDCH   K++S    
Sbjct: 721 ALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETR 780

Query: 785 RHIILRDSNRFHHFKAGNCSCGDYW 809
           R I+LRDSNRFHHFK G CSC  +W
Sbjct: 781 REIVLRDSNRFHHFKDGYCSCRGFW 805



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 157/506 (31%), Positives = 251/506 (49%), Gaps = 45/506 (8%)

Query: 31  NSVKPASDLNRALVDF-SNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKL 89
           NSV     L   LV F +  G++ E  ++F+ M  ++ + WN M++ YA  G  +E+  L
Sbjct: 128 NSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICL 187

Query: 90  FN------------ETPFKNF--------FTWSSLIYGYSNYGLDIEAFELFWQMQLEGY 129
           F             E+ F+ F         +W+S+I GY + GL      ++ QM   G 
Sbjct: 188 FKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGI 247

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
                T+ +VL  C+  G L  G+  H  AIK+ F+        L+DMY+KC  +  A  
Sbjct: 248 DVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALR 307

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +F+   + +N V+WT+MI GY+++G    AI+  + M  EGV+ +     SIL ACA   
Sbjct: 308 VFEKMGE-RNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSG 366

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
           + D G  VH  I ++  E+N++V +AL+DMYAKCG +++A  +     + + +SWN+MI 
Sbjct: 367 SLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI- 425

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
                                ++K D  T   VL   AS   L   K +H  I++ G+  
Sbjct: 426 --------------------GELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSS 465

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
            + V NAL+D+Y K G L  A ++F+++  KD++SWT +I G   HG   EA+  F++MR
Sbjct: 466 DRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMR 525

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAKCGCI 488
            +GI PD V   SIL AC+   +LE G +   +          L     +V + ++ G +
Sbjct: 526 DAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNL 585

Query: 489 NDANRVFDSMH-TRDVITWTALIMGC 513
           + A    +++    D   W AL+ GC
Sbjct: 586 SKAYEFMETLPIAPDATIWGALLCGC 611



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 145/477 (30%), Positives = 210/477 (44%), Gaps = 86/477 (18%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL--- 293
           T+ S+L  CA + +   G +VH  I S+    +  +   L+  YA CGDL   RR+    
Sbjct: 101 TYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTM 160

Query: 294 -------------EYSEI----------------------------------DNEV-SWN 305
                        EY++I                                  D +V SWN
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWN 220

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           SMI G+   G  +  L ++K+M    I +D  T  SVL   A++  L+  K+VHSL +K+
Sbjct: 221 SMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
            FE     +N L+DMY+K G+LD A  VF  M +++V+SWTS+I G    G  + A+K  
Sbjct: 281 SFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLL 340

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             M   G+  D V ++SIL ACA    L+ G+ VH     +   S+L V N+L+ +YAKC
Sbjct: 341 QQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKC 400

Query: 486 GCINDANRVFDSMHTRDVITWTALI--------------MGCAQNGKGKEALQFYDQMLA 531
           G +  AN VF +M  +D+I+W  +I                CA     +   + +  +L 
Sbjct: 401 GSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYILR 460

Query: 532 RGTKPDYIT---FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD--HYACMIDLLGR 586
            G   D       V L   C   GL   AR  F+ +       P  D   +  MI   G 
Sbjct: 461 NGYSSDRHVANALVDLYVKCGVLGL---ARLLFDMI-------PSKDLVSWTVMIAGYGM 510

Query: 587 SGKLIEAKALLDQMVG---EPDATVWKALLSACRVHGDLELGER---AANNLFELEP 637
            G   EA A  ++M     EPD   + ++L AC   G LE G R      N F +EP
Sbjct: 511 HGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEP 567



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 188/399 (47%), Gaps = 52/399 (13%)

Query: 43  LVDFSNSGEIDEAGQLFEKMSDRDGFTW-----NTMIAAYANSGRLREAKKLFNETPFKN 97
           LV  +NSG +   G+    ++ +  F       NT++  Y+  G L  A ++F +   +N
Sbjct: 258 LVGCANSGTLS-LGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERN 316

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
             +W+S+I GY+  G    A +L  QM+ EG +     + ++L  C+  G L  G+  H 
Sbjct: 317 VVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHD 376

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
           Y      + N FV   L+DMYAKC  +  A  +F      K+ ++W TMI          
Sbjct: 377 YIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVV-KDIISWNTMIG--------- 426

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
              E   D R         T   +L ACA++SA + G ++HG IL +G+ ++ +V +AL+
Sbjct: 427 ---ELKPDSR---------TMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALV 474

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
           D+Y KCG L  AR L +     + VSW  MI G+   G+  EA++ F +M    I+ D+ 
Sbjct: 475 DLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEV 534

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN------------ALIDMYAKQG 385
           ++ S+L  +A +         HS +++ G+  +  + N             ++D+ ++ G
Sbjct: 535 SFISIL--YACS---------HSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTG 583

Query: 386 NLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALK 423
           NL  A+     +    D   W +L+ GC  +   E A K
Sbjct: 584 NLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEK 622



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 177/396 (44%), Gaps = 72/396 (18%)

Query: 298 IDNEVS-WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
           ID++V+ +N+ I+ F + G  + A+ L       +++    TY SVL   A      + K
Sbjct: 62  IDHQVTDYNAKILHFCQLGDLENAMELICMCQKSELETK--TYGSVLQLCAGLKSFTDGK 119

Query: 357 SVHSLIVKT-----GFEGYKFVN--------------------------NALIDMYAKQG 385
            VHS+I        G  G K V+                          N ++  YAK G
Sbjct: 120 KVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG 179

Query: 386 NL--------------------DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           +                     + AF +F+ + D+DVISW S+I+G   +G  E  L  +
Sbjct: 180 DFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIY 239

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             M   GI  D   + S+L  CA    L  G+ VH++ +KS     ++  N+L+ +Y+KC
Sbjct: 240 KQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKC 299

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G ++ A RVF+ M  R+V++WT++I G  ++G+   A++   QM   G K D +    +L
Sbjct: 300 GDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSIL 359

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYAC--MIDLLGRSGKLIEAKALL------ 597
            AC+ +G  +N +   +  D +       + + C  ++D+  + G +  A ++       
Sbjct: 360 HACARSGSLDNGK---DVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVK 416

Query: 598 -----DQMVGE--PDATVWKALLSACRVHGDLELGE 626
                + M+GE  PD+     +L AC     LE G+
Sbjct: 417 DIISWNTMIGELKPDSRTMACVLPACASLSALERGK 452


>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 783

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 271/727 (37%), Positives = 414/727 (56%), Gaps = 5/727 (0%)

Query: 84  REAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRL 142
           R A+ LF   P  + F ++ L+ G+S       +  L+  ++      P  +T    +  
Sbjct: 61  RHARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAA 120

Query: 143 CSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVA 202
           CS    L      H ++I   +  N FV + LVD+Y K   +  A  +F   P+ ++ V 
Sbjct: 121 CSNDKHLM---LLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPE-RDTVL 176

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
           W TMI G  +N     +I+ FR+M  +GV  +  T  ++L A A +     G  +    L
Sbjct: 177 WNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLAL 236

Query: 263 SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
             GF    YV + LI +Y+KCGD+++AR L       + +++N+MI GF   G  + ++ 
Sbjct: 237 KIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVK 296

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYA 382
           LF+++     ++   T   ++   +    L+ A S+H   VK+G      V+ A   +Y 
Sbjct: 297 LFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYN 356

Query: 383 KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
           K   +D A  +F+   +K V++W ++I+G   +GS E A+  F +M  +   P+ V +++
Sbjct: 357 KLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITT 416

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
           ILSACA+L  L FG+ VH +        ++ V  +LV +YAKCG I++A ++FDSM  ++
Sbjct: 417 ILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKN 476

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
            +TW  +I G   +G G EAL+ Y++ML  G  P  +TF+ +L+ACSHAGL       F 
Sbjct: 477 TVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFH 536

Query: 563 SMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDL 622
           +M   Y I+P  +HYACM+D+LGRSG+L +A   + +M  EP   VW  LL AC +H D 
Sbjct: 537 NMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDT 596

Query: 623 ELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVET 682
           ++   A+  LFEL+P +   YV LSN+YS    +  AA +R+++K R + K PGC+ +E 
Sbjct: 597 DIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEV 656

Query: 683 NSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHS 742
           N   H+F+S DR H   TDIY+K++++   ++E GY  +   ALH+VEEE KE+ +  HS
Sbjct: 657 NGTPHVFVSGDRSHSHATDIYAKLEKLTGKMREMGYQAETVPALHDVEEEEKELAVNVHS 716

Query: 743 EKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGN 802
           EKLA+AFGL+T   G  IRI KNLRVC DCHTA K+IS +  R I++RD+NRFHHFK G 
Sbjct: 717 EKLAIAFGLITTEPGNEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGI 776

Query: 803 CSCGDYW 809
           CSCGDYW
Sbjct: 777 CSCGDYW 783



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 205/412 (49%), Gaps = 6/412 (1%)

Query: 53  DEAGQLFEKMSDRDGFTWNTMIAA-----YANSGRLREAKKLFNETPFKNFFTWSSLIYG 107
           D+   L    S  DG+  N  + +     Y    R+  A+K+F+  P ++   W+++I G
Sbjct: 124 DKHLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMING 183

Query: 108 YSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLN 167
                   ++ +LF +M  +G R    T+  VL   +    L+ G      A+K  F   
Sbjct: 184 LVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFC 243

Query: 168 AFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR 227
            +V+TGL+ +Y+KC  +  A  LF+   +  + +A+  MI+G++ NG    +++ FR++ 
Sbjct: 244 DYVLTGLISLYSKCGDVNTARLLFRRI-NRPDLIAYNAMISGFTANGGTECSVKLFRELL 302

Query: 228 VEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLD 287
             G   +  T   ++   +          +HG  + SG   N  V +A   +Y K  ++D
Sbjct: 303 FSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEID 362

Query: 288 SARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFA 347
            AR L + S     V+WN+MI G+ + G  + A+SLFK+M   +   +  T  ++L+  A
Sbjct: 363 LARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACA 422

Query: 348 SNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTS 407
               L+  K VH LI     E   +V+ AL+DMYAK GN+  A+ +F+ M +K+ ++W +
Sbjct: 423 QLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNT 482

Query: 408 LITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           +I G   HG   EALK +++M   G  P  V   S+L AC+   ++  G+++
Sbjct: 483 MIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEI 534



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 167/372 (44%), Gaps = 34/372 (9%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +S  G+++ A  LF +++  D   +N MI+ +  +G    + KLF E  F          
Sbjct: 254 YSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLF---------- 303

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                                 G R S  T+  ++ L S  G L      HG+ +K+   
Sbjct: 304 ---------------------SGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGII 342

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
           LN  V T    +Y K   I  A +LF   P+ K  VAW  MI+GY+QNG    AI  F++
Sbjct: 343 LNPTVSTAFTAIYNKLNEIDLARHLFDESPE-KTVVAWNAMISGYTQNGSTETAISLFKE 401

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M       N  T  +IL+ACA + +  FG  VH  I S   E N+YV +AL+DMYAKCG+
Sbjct: 402 MMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGN 461

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-N 344
           +  A +L +     N V+WN+MI G+   G+  EAL L+ +M          T+ SVL  
Sbjct: 462 ISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYA 521

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVI 403
           C  + +     +  H+++ K   E        ++D+  + G L+ A      M  +    
Sbjct: 522 CSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPA 581

Query: 404 SWTSLITGCAYH 415
            W +L+  C  H
Sbjct: 582 VWGTLLGACMIH 593



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 80/189 (42%), Gaps = 35/189 (18%)

Query: 23  ARYTHNVGNS--VKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
            ++ H++  S  ++P   ++ ALVD ++  G I EA QLF+ MS+++  TWNTMI  Y  
Sbjct: 430 GKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGL 489

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
            G   EA KL+NE                               M   GY PS  T  +V
Sbjct: 490 HGYGHEALKLYNE-------------------------------MLHLGYNPSAVTFLSV 518

Query: 140 LRLCSLKGLLQRGEQ-FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           L  CS  GL+  GE+ FH    K   +        +VD+  +   + +A    K  P   
Sbjct: 519 LYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEP 578

Query: 199 NHVAWTTMI 207
               W T++
Sbjct: 579 GPAVWGTLL 587


>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
          Length = 847

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 300/796 (37%), Positives = 447/796 (56%), Gaps = 34/796 (4%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANS----------GRLREA--- 86
           N  +  +S+  ++  A +LF  M  R+  +W T+++  + +            +R A   
Sbjct: 60  NHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVA 119

Query: 87  -KKLFNETPFKNFF-TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRP------SQYTLDN 138
             +L  ET F N      +L   + + G  +     +W  +L  +RP      +   L +
Sbjct: 120 PTRLIYETKFHNTLGPKHTLAASHCHSGPTL--MVKYWGQRL--WRPPAPAAATTVHLAS 175

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKT-CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           +L+ C   G L+RG   H   + +     + F+   L+ MY+ C  +  A  LF   P  
Sbjct: 176 LLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPR- 234

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           +N V+WTT+++G SQN     A+  F  MR  GV   +F   S   A AA+ A     + 
Sbjct: 235 RNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAP---LRA 291

Query: 258 HGCILSS--GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
             C  S+  GF+  ++V S L DMY+KCG L  A R+ +     + V+W +MI G+A+ G
Sbjct: 292 RSCTASASVGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNG 351

Query: 316 FHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
             + A+  F+ M     +  D   + SVL+      D   +KS+H  + K GFE    V 
Sbjct: 352 SLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVR 411

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
           NALIDMYAK  +++ A  V  +     +V+S TS+I G       EEAL  + ++R  G+
Sbjct: 412 NALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGV 471

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
            P+    SS++  CA   +LE G Q+HA  +K+       V ++LV +Y KCG I+ + +
Sbjct: 472 EPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQ 531

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGL 553
           +F+ +  R  I W A+I   AQ+G G+EA+Q +D+M+  G +P++I FV LL ACSHAGL
Sbjct: 532 LFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGL 591

Query: 554 AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
            +    YF SM + +GI+P  +HY+C+ID  GR+G+L EA   + +M  +P+A  W +LL
Sbjct: 592 VDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLL 651

Query: 614 SACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRK 673
            ACR+ G  ELGE AA NL +LEP N   +V LS +Y++ G+WED   VRKLM+   I+K
Sbjct: 652 GACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKK 711

Query: 674 EPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEG 733
            PG SWV++N + H+F SED  HP + DIY K++E+   IKE GY+PD +F   N+E+  
Sbjct: 712 LPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIA 771

Query: 734 KEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSN 793
           KE  L YHSE++AVAF L+++P   PI + KNLR+C DCHTA K+I  V  R II+RD++
Sbjct: 772 KERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNS 831

Query: 794 RFHHFKAGNCSCGDYW 809
           RFHHF  G CSCGDYW
Sbjct: 832 RFHHFVNGRCSCGDYW 847



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 148/346 (42%), Gaps = 51/346 (14%)

Query: 238 FPSILTACAAVSARDFGAQVHG-CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
             S+L +C        G  +H   +LS    A+ ++ + LI MY+ C DL SA RL    
Sbjct: 23  LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM 82

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY----------------- 339
              N VSW +++ G ++   H +AL+ F  M    +      Y                 
Sbjct: 83  PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAAS 142

Query: 340 -------------------------------PSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
                                           S+L       DL   + +H+ +V +G  
Sbjct: 143 HCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAA 202

Query: 369 GYK-FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
               F+ N LI MY+   +L  A  +F  M  ++ +SWT+L++G + +  + +AL  F+ 
Sbjct: 203 AASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAA 262

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           MR +G+ P    +SS   A A L      +   A     G  + L V ++L  +Y+KCG 
Sbjct: 263 MRRAGVAPTRFALSSAARAAAALGAPLRARSCTAS-ASVGFDTELFVASNLADMYSKCGL 321

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
           +++A RVFD M  +D + WTA+I G A+NG  + A+  +  M   G
Sbjct: 322 LSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREG 367



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 79/333 (23%), Positives = 138/333 (41%), Gaps = 53/333 (15%)

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGFEGYK-FVNNALIDMYAKQGNLDCAFMVFNLMQD 399
           S+L       DL   + +H+ +V +G      F+ N LI MY+   +L  A  +F  M  
Sbjct: 25  SLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPR 84

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVV-------------------- 439
           ++ +SWT+L++G + +  + +AL  F+ MR +G+ P  ++                    
Sbjct: 85  RNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAASHC 144

Query: 440 ----------------------------VSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
                                       ++S+L +C     L  G+ +HA  + SG  ++
Sbjct: 145 HSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAA 204

Query: 472 LS-VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
            + + N L+ +Y+ C  +  A R+F +M  R+ ++WT L+ G +QN    +AL  +  M 
Sbjct: 205 STFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMR 264

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKL 590
             G  P          A +  G    AR    S     G        + + D+  + G L
Sbjct: 265 RAGVAPTRFALSSAARAAAALGAPLRARSCTASAS--VGFDTELFVASNLADMYSKCGLL 322

Query: 591 IEAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
            EA  + DQM  + DA  W A++     +G LE
Sbjct: 323 SEACRVFDQM-PQKDAVAWTAMIDGYAKNGSLE 354



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 13/177 (7%)

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS-VDNSLVLVYAKCGCINDANRVFD 496
           V ++S+L +C     L  G+ +HA  + SG  ++ + + N L+ +Y+ C  +  A R+F 
Sbjct: 21  VHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFA 80

Query: 497 SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD---YITFVGLLFACSHAGL 553
           +M  R+ ++WT L+ G +QN    +AL  +  M   G  P    Y T         H   
Sbjct: 81  AMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLA 140

Query: 554 AENARWYFESMDKVYGIK----PGPD-----HYACMIDLLGRSGKLIEAKALLDQMV 601
           A +       M K +G +    P P      H A ++   GR+G L   + L  ++V
Sbjct: 141 ASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLV 197


>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 255/683 (37%), Positives = 400/683 (58%), Gaps = 48/683 (7%)

Query: 174  LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
            L+++YAK + + +A  +F+  P   +  +WT +I+G+++ G     +  F  M+ +GV  
Sbjct: 327  LLNLYAKSQNLEQAHKMFEEIPQ-TDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCP 385

Query: 234  NQFTFPSILTACAA-VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC--------- 283
            NQFT   +L +C++ V+    G  +HG IL +G + +  + ++++D Y KC         
Sbjct: 386  NQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKL 445

Query: 284  ----------------------GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEAL 321
                                  GD+  +  L       +  SWN+MI G  R G  + AL
Sbjct: 446  FGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVAL 505

Query: 322  SLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMY 381
             L  KM A     +  T+   L   +S   L   K +H+ ++K G     FV N+LIDMY
Sbjct: 506  ELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMY 565

Query: 382  AKQGNLDCAFMVF-NLMQDKDV--------------ISWTSLITGCAYHGSYEEALKYFS 426
             K G ++ A ++F +L Q+  +              +SW+S+++G   +G +E+ALK FS
Sbjct: 566  CKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFS 625

Query: 427  DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
             M  S +  D   ++S++SACA   VLE G+QVH    K G    + + +S++ +Y KCG
Sbjct: 626  FMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCG 685

Query: 487  CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
             +NDA  +F+    R+V+ WT++I GCA +G+G+EA++ ++ M+  G  P+ ++FVG+L 
Sbjct: 686  SLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLT 745

Query: 547  ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
            ACSHAGL E    YF  M +VYGI+PG +H+ CM+DL GR+G+L E K  +        +
Sbjct: 746  ACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLS 805

Query: 607  TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
            +VW++ LS+CRVH ++E+G      L ELEP +A PY+  S++ +T  +WE+AA++R LM
Sbjct: 806  SVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYILFSSICATEHRWEEAAKIRSLM 865

Query: 667  KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFAL 726
            + RG++K P  SW++  +QVH F+  DR HP  T IYS +DE++  +KE GY  D+   +
Sbjct: 866  QQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSYLDELIGRLKEIGYSTDVTPVM 925

Query: 727  HNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRH 786
             +VE+E +++ L YHSEKLA+A+G+++   G PIR+ KNLRVC DCH  +KY S +  R 
Sbjct: 926  QDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPIRVMKNLRVCIDCHNFIKYASELLGRE 985

Query: 787  IILRDSNRFHHFKAGNCSCGDYW 809
            II+RD +RFHHFK G+CSC DYW
Sbjct: 986  IIIRDIHRFHHFKHGHCSCADYW 1008



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 143/436 (32%), Positives = 225/436 (51%), Gaps = 46/436 (10%)

Query: 67  GFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL 126
           G   N ++  YA S  L +A K+F E P  + F+W+ LI G++  GL  +   LF +MQ 
Sbjct: 321 GIRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQD 380

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQR-GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           +G  P+Q+TL  VL+ CS      R G+  HG+ ++   DL+A +   ++D Y KC+C  
Sbjct: 381 QGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFG 440

Query: 186 EAEYLFKMFPD------------------------------GKNHVAWTTMITGYSQNGY 215
            AE LF +  +                              GK+  +W TMI G  +NG 
Sbjct: 441 YAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGC 500

Query: 216 GFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSA 275
              A+E    M   G   N+ TF   L   +++S    G Q+H  +L  G   + +V+++
Sbjct: 501 ERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNS 560

Query: 276 LIDMYAKCGDLDSARRLL-----EYSEIDNE----------VSWNSMIVGFARQGFHKEA 320
           LIDMY KCG+++ A  +      E S +++E          VSW+SM+ G+ + G  ++A
Sbjct: 561 LIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDA 620

Query: 321 LSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDM 380
           L  F  M    +++D FT  SV++  AS   L   + VH  I K G     F+ +++IDM
Sbjct: 621 LKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDM 680

Query: 381 YAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVV 440
           Y K G+L+ A+++FN  +D++V+ WTS+I+GCA HG   EA++ F  M   GI P+ V  
Sbjct: 681 YVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSF 740

Query: 441 SSILSACAELTVLEFG 456
             +L+AC+   +LE G
Sbjct: 741 VGVLTACSHAGLLEEG 756



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 190/388 (48%), Gaps = 24/388 (6%)

Query: 55  AGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLD 114
           A +LF  M+++D  +WN M+++Y   G ++++  LF + P K+  +W+++I G    G +
Sbjct: 442 AEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCE 501

Query: 115 IEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
             A EL ++M   G   ++ T    L L S   +L  G+Q H   +K     + FV   L
Sbjct: 502 RVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSL 561

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKN--------------HVAWTTMITGYSQNGYGFKAI 220
           +DMY KC  + +A  +FK  P   +               V+W++M++GY QNG    A+
Sbjct: 562 IDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDAL 621

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
           + F  M    VE ++FT  S+++ACA+    + G QVHG I   G   +V++ S++IDMY
Sbjct: 622 KTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMY 681

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
            KCG L+ A  +   ++  N V W SMI G A  G  +EA+ LF+ M    I  ++ ++ 
Sbjct: 682 VKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFV 741

Query: 341 SVLNCFASNIDLNNAKSVHSLI-----VKTGFEGYKFVNNALIDMYAKQGNL-DCAFMVF 394
            VL   +    L        L+     ++ G E +      ++D+Y + G L +    + 
Sbjct: 742 GVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHF----TCMVDLYGRAGRLNEIKEFIH 797

Query: 395 NLMQDKDVISWTSLITGCAYHGSYEEAL 422
           N    K    W S ++ C  H + E  +
Sbjct: 798 NNAISKLSSVWRSFLSSCRVHKNIEMGI 825



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 107/200 (53%), Gaps = 6/200 (3%)

Query: 334 IDDFTYPSVL---NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
           +  + YP +    + F+ +++  N++ +H+ ++K G  G +   N L+++YAK  NL+ A
Sbjct: 283 LSSYFYPPLXYFSSTFSDSMNYPNSEVLHAKLIKNGCVGIR--GNHLLNLYAKSQNLEQA 340

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE- 449
             +F  +   DV SWT LI+G A  G   + L  F+ M+  G+CP+   +S +L +C+  
Sbjct: 341 HKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSN 400

Query: 450 LTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTAL 509
           +     G+ +H   L++G      ++NS++  Y KC C   A ++F  M  +D ++W  +
Sbjct: 401 VNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIM 460

Query: 510 IMGCAQNGKGKEALQFYDQM 529
           +    Q G  ++++  + Q+
Sbjct: 461 MSSYLQIGDMQKSVDLFRQL 480



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 2/93 (2%)

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
           + +HA  +K+G C  +   N L+ +YAK   +  A+++F+ +   DV +WT LI G A+ 
Sbjct: 308 EVLHAKLIKNG-CVGIR-GNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARI 365

Query: 517 GKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
           G   + L  + +M  +G  P+  T   +L +CS
Sbjct: 366 GLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCS 398


>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
 gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
          Length = 941

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 270/750 (36%), Positives = 426/750 (56%), Gaps = 7/750 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           DG   N ++  Y + G   + K +F+     +   W+++I G S  G   E   +F +M 
Sbjct: 193 DGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMD 252

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           LEG + ++ T  +++ +C     ++ GE      +++ F  +  + T L+ +Y +C  + 
Sbjct: 253 LEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILD 312

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A+ L +     ++ VAW  M+T  +QNG  ++AI   R M +EG  +N+ T+ S+L AC
Sbjct: 313 RAKGLLEHMYQ-RDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEAC 371

Query: 246 AAVSARDFGAQVHGCILSSGF-EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           A + A   G ++H  +L  G  +  V V +++I MY KCG  ++A  + E     ++VSW
Sbjct: 372 ANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSW 431

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N++I         ++AL LF  M    ++ ++FT  S+L       DL  A+ +H+    
Sbjct: 432 NAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAA 491

Query: 365 TGFE-GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH--GSYEEA 421
            GF      V N++++MYA+ G+L  A   F+ +++K +++W+ ++   A    G    A
Sbjct: 492 GGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRA 551

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC-SSLSVDNSLVL 480
            K+F +M   GI P  V   S L ACA +  LE G+ +H     SG   +SL + N+++ 
Sbjct: 552 FKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIIN 611

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           +Y KCG  +DA  VFD M  + +I+W +LI+  A NG   EAL    +ML +G  PD  T
Sbjct: 612 MYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGT 671

Query: 541 FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL-LDQ 599
            V +L+  SHAGL E    +F S  + +G++P      C++DLL R G L  A+ L L  
Sbjct: 672 SVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILAS 731

Query: 600 MVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDA 659
              + D   W  LL+AC+ +GD + G R A  +FELEP ++  +V L+N+Y++ G+W DA
Sbjct: 732 PACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWSDA 791

Query: 660 ARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYV 719
           +R+RK+M+   ++KEPGCSW+E +  VH FIS +  HP   +I   ++++ L ++EAGYV
Sbjct: 792 SRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHPKIREICEDLEKLTLRMREAGYV 851

Query: 720 PDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYI 779
           PD    +H+VEE  KE  L+ HSE+LA+ FGL++   G  IR+ KNLRVC DCH A K I
Sbjct: 852 PDTTNVVHDVEEGDKEEILSRHSERLAIVFGLMSTRPGETIRVVKNLRVCSDCHAATKII 911

Query: 780 SAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           S+V  R I++RDS+RFHHFK G CSCGD+W
Sbjct: 912 SSVVGREIVVRDSSRFHHFKHGQCSCGDFW 941



 Score =  275 bits (704), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 171/571 (29%), Positives = 280/571 (49%), Gaps = 12/571 (2%)

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
           Y    R+ +A  +F+    KN F+W+ ++  YS  G   EA ELF +MQ EG RP +   
Sbjct: 2   YGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVVF 61

Query: 137 DNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD 196
              L  C+  G L  G Q H   + +    N  +   LV+MY KC+ +  AE +F    D
Sbjct: 62  VIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVF----D 117

Query: 197 G---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDF 253
           G   ++ V+WT M+  Y+QNG   +A+EC   M  EGV+ NQ TF +I+  CA +   D 
Sbjct: 118 GMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDL 177

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           G ++H  I++ G E +  + +AL+ MY  CG  D  + +       + + W +MI G ++
Sbjct: 178 GRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQ 237

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID-LNNAKSVHSLIVKTGFEGYKF 372
            G ++E L +F+KM    +K ++ TY S++     N+D +   + + + I+++ F     
Sbjct: 238 NGQYEEGLLVFRKMDLEGVKANEVTYMSMVE-VCRNLDAVKEGEMIDARILESPFCSSTL 296

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           +  +LI +Y + G LD A  +   M  +DV++W +++T CA +G   EA+     M + G
Sbjct: 297 LATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEG 356

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAKCGCINDA 491
              + V   S+L ACA L  L  G+++HA  L  G     ++V NS++ +Y KCG    A
Sbjct: 357 FGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAA 416

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
             VF++M  +D ++W A+I     N K ++AL+ +  M   G + +  T + LL AC   
Sbjct: 417 MSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGL 476

Query: 552 GLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKA 611
              + AR                     ++++  R G L++AK   D +  E     W  
Sbjct: 477 EDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSL-EEKGLVAWSI 535

Query: 612 LLSACRVHGDLELGERAANNLFELEPMNAMP 642
           +L+A     D   G RA     E+E     P
Sbjct: 536 ILAAYAQSKDGP-GRRAFKFFQEMEAEGIKP 565



 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 172/584 (29%), Positives = 296/584 (50%), Gaps = 14/584 (2%)

Query: 42  ALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIA-----AYANSGRLREAKKLFNETPFK 96
           AL   + SGE+D   Q+   +    G T N +I+      Y     +  A+K+F+    +
Sbjct: 64  ALDACAASGELDHGRQIHSSVVG-SGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLR 122

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
           +  +W++++  Y+  G   +A E   +M  EG +P+Q T   ++ +C+   LL  G + H
Sbjct: 123 DVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIH 182

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHV-AWTTMITGYSQNGY 215
              I    + +  +   LV MY  C    + + +F     G++ V  WTTMI G SQNG 
Sbjct: 183 HRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRM--GQSSVLLWTTMIAGCSQNGQ 240

Query: 216 GFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSA 275
             + +  FR M +EGV++N+ T+ S++  C  + A   G  +   IL S F ++  + ++
Sbjct: 241 YEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATS 300

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           LI +Y +CG LD A+ LLE+    + V+WN+M+   A+ G + EA+ L ++M       +
Sbjct: 301 LISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGAN 360

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF-VNNALIDMYAKQGNLDCAFMVF 394
             TY SVL   A+   L+  + +H+ ++  G    +  V N++I MY K G  + A  VF
Sbjct: 361 KVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVF 420

Query: 395 NLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLE 454
             M  KD +SW ++I     +  +++AL+ F  M + G+  +   + S+L AC  L  L+
Sbjct: 421 EAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLK 480

Query: 455 FGQQVH-AVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC 513
             +Q+H        G +S +V NS+V +YA+CG + DA + FDS+  + ++ W+ ++   
Sbjct: 481 LARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAY 540

Query: 514 AQ--NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIK 571
           AQ  +G G+ A +F+ +M A G KP  +TFV  L AC+     E+ R           ++
Sbjct: 541 AQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVE 600

Query: 572 PGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
                   +I++ G+ G   +AK + DQM  E     W +L+ A
Sbjct: 601 TSLVLGNTIINMYGKCGSPSDAKLVFDQM-PEKCLISWNSLIVA 643



 Score =  239 bits (610), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 249/492 (50%), Gaps = 10/492 (2%)

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           MY KC  + +A  +F      KN  +WT M+  YSQNG+  +A+E F  M+ EG   ++ 
Sbjct: 1   MYGKCARVTDALMVFDGI-SAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKV 59

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
            F   L ACAA    D G Q+H  ++ SG  +N+ + ++L++MY KC D+  A ++ +  
Sbjct: 60  VFVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGM 119

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
            + + VSW +M+  +A+ G   +AL    +M A  +K +  T+ ++++  A    L+  +
Sbjct: 120 LLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGR 179

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H  I+  G E    + NAL+ MY   G+ D    VF+ M    V+ WT++I GC+ +G
Sbjct: 180 KIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNG 239

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
            YEE L  F  M + G+  + V   S++  C  L  ++ G+ + A  L+S  CSS  +  
Sbjct: 240 QYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLAT 299

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           SL+ +Y +CG ++ A  + + M+ RDV+ W A++  CAQNG   EA+    +M   G   
Sbjct: 300 SLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGA 359

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           + +T++ +L AC++       R     +     ++        +I + G+ G+   A ++
Sbjct: 360 NKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSV 419

Query: 597 LDQMVGEPDATVWKALLSACRVHGDLELGERAANNLF---ELEPMNAMPYVQLSNMYSTA 653
            + M  + D + W A+++A   +   +     A  LF   ELE + +  +  LS +    
Sbjct: 420 FEAMPRKDDVS-WNAVINASVGNSKFQ----DALELFHGMELEGLRSNEFTLLS-LLEAC 473

Query: 654 GKWEDAARVRKL 665
           G  ED    R++
Sbjct: 474 GGLEDLKLARQI 485



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 137/493 (27%), Positives = 221/493 (44%), Gaps = 42/493 (8%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +   G +D A  L E M  RD   WN M+ A A +G                   W    
Sbjct: 305 YGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGD-----------------NW---- 343

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                     EA  L  +M +EG+  ++ T  +VL  C+    L +G + H   +  C  
Sbjct: 344 ----------EAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVL-LCGL 392

Query: 166 LNAFVVTG--LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
           L   V  G  ++ MY KC     A  +F+  P  K+ V+W  +I     N     A+E F
Sbjct: 393 LQREVAVGNSVITMYGKCGQTEAAMSVFEAMPR-KDDVSWNAVINASVGNSKFQDALELF 451

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN-VYVQSALIDMYAK 282
             M +EG+ SN+FT  S+L AC  +       Q+H    + GF  N   V +++++MYA+
Sbjct: 452 HGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYAR 511

Query: 283 CGDLDSARRLLEYSEIDNEVSWNSMIVGFA--RQGFHKEALSLFKKMHARDIKIDDFTYP 340
           CG L  A++  +  E    V+W+ ++  +A  + G  + A   F++M A  IK  + T+ 
Sbjct: 512 CGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFV 571

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGF-EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
           S L+  A+   L + +S+H     +GF E    + N +I+MY K G+   A +VF+ M +
Sbjct: 572 SALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPE 631

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           K +ISW SLI   A++G   EAL    +M + G  PD     SIL   +   +LE G + 
Sbjct: 632 KCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEH 691

Query: 460 HAVFLKSGGCSSLSVD-NSLVLVYAKCGCINDANRVF--DSMHTRDVITWTALIMGCAQN 516
               ++  G    S     LV + A+ G ++ A  +         D I W  L+  C   
Sbjct: 692 FRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLLAACKSY 751

Query: 517 GKGKEALQFYDQM 529
           G  +  ++  +++
Sbjct: 752 GDPQRGIRCAERV 764



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 189/405 (46%), Gaps = 41/405 (10%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  +   G+ + A  +FE M  +D  +WN +I A   + + +               
Sbjct: 401 NSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQ--------------- 445

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
                           +A ELF  M+LEG R +++TL ++L  C     L+   Q H  A
Sbjct: 446 ----------------DALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARA 489

Query: 160 IKTCFDLNAFVV-TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ--NGYG 216
               F  N+  V   +V+MYA+C  + +A+  F    + K  VAW+ ++  Y+Q  +G G
Sbjct: 490 AAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEE-KGLVAWSIILAAYAQSKDGPG 548

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF-EANVYVQSA 275
            +A + F++M  EG++  + TF S L ACAA++  + G  +H    +SGF E ++ + + 
Sbjct: 549 RRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNT 608

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           +I+MY KCG    A+ + +       +SWNS+IV +A  G   EALS  ++M  +    D
Sbjct: 609 IINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPD 668

Query: 336 DFTYPSVLNCFA-SNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA--FM 392
             T  S+L   + + +     +   S I   G E        L+D+ A++G LD A   +
Sbjct: 669 SGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELI 728

Query: 393 VFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           + +     D I+W +L+  C  +G  +  ++     R+  + P H
Sbjct: 729 LASPACQADTIAWMTLLAACKSYGDPQRGIRCAE--RVFELEPQH 771


>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 277/735 (37%), Positives = 416/735 (56%), Gaps = 10/735 (1%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAF----ELFWQMQLEG 128
           +I  Y   G +  ++  F+    KN F+W+S+I  Y  +G   EA     +LF       
Sbjct: 60  LINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGH 119

Query: 129 YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
            RP  YT   +L+ C     L  G++ H    K  F+ + FV   LV +Y++   +  A 
Sbjct: 120 LRPDFYTFPPILKACVS---LVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAH 176

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
            +F   P  K+  +W  MI+G+ QNG    A+     M+ EGV+ +  T  SIL  CA  
Sbjct: 177 KVFVDMP-VKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQS 235

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
                G  +H  +L  G +++V+V +ALI+MY+K G L  A+ + +  E+ + VSWNS+I
Sbjct: 236 DDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSII 295

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG-F 367
             + +      AL  FK M    I+ D  T  S+ + F+   D   ++S+   +++    
Sbjct: 296 AAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWL 355

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
           +    + NAL++MYAK G ++CA  VF+ +  KD ISW +L+TG   +G   EA+  ++ 
Sbjct: 356 DKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNM 415

Query: 428 MR-ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
           M       P+     SI+ A + +  L+ G ++HA  +K+     + V   L+ +Y KCG
Sbjct: 416 MEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCG 475

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
            + DA  +F  +     + W A+I     +G+G+EALQ +  MLA   K D+ITFV LL 
Sbjct: 476 RLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLS 535

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ACSH+GL +  +  F+ M K YGIKP   HY CM+DLLGR+G L +A  L+  M  +PDA
Sbjct: 536 ACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDA 595

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
           ++W ALLSAC+++G+ ELG  A++ L E++  N   YV LSN+Y+   KWE   +VR L 
Sbjct: 596 SIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLA 655

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFAL 726
           + RG+RK PG S V   S+  +F + ++ HP  T+IY ++  +   +K  GYVPD +F  
Sbjct: 656 RDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVY 715

Query: 727 HNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRH 786
            ++EE+ KE  L  HSE+LA+AFG+++ P  +PIRIFKNLRVCGDCH A KYIS +  R 
Sbjct: 716 QDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISRISERE 775

Query: 787 IILRDSNRFHHFKAG 801
           I++RDSNRFHHFK G
Sbjct: 776 IVVRDSNRFHHFKDG 790



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 231/477 (48%), Gaps = 5/477 (1%)

Query: 58  LFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEA 117
           +F+   + D F   +++  Y+  G L  A K+F + P K+  +W+++I G+   G    A
Sbjct: 147 VFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGA 206

Query: 118 FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
             +  +M+ EG +    T+ ++L +C+    +  G   H + +K   D + FV   L++M
Sbjct: 207 LGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINM 266

Query: 178 YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
           Y+K   + +A+ +F    + ++ V+W ++I  Y QN     A+  F+ M++ G+  +  T
Sbjct: 267 YSKFGRLQDAQMVFDQM-EVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLT 325

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSG-FEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
             S+ +  + +S +     + G ++     + +V + +AL++MYAK G ++ A  + +  
Sbjct: 326 VVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQL 385

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKM-HARDIKIDDFTYPSVLNCFASNIDLNNA 355
              + +SWN+++ G+ + G   EA+  +  M   RD   +  T+ S++  ++    L   
Sbjct: 386 PRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQG 445

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
             +H+ ++K       FV   LID+Y K G L+ A  +F  +     + W ++I     H
Sbjct: 446 MKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIH 505

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC-SSLSV 474
           G  EEAL+ F DM    +  DH+   S+LSAC+   +++ GQ+   +  K  G   SL  
Sbjct: 506 GRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKH 565

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQML 530
              +V +  + G +  A  +  +M  + D   W AL+  C   G  +      D++L
Sbjct: 566 YGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLL 622



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 133/450 (29%), Positives = 218/450 (48%), Gaps = 38/450 (8%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           F ++  +C  V+A     ++H  +L  G   N+ + + LI++Y   GD+  +R   +Y  
Sbjct: 25  FNALFNSCVNVNATK---KLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIH 81

Query: 298 IDNEVSWNSMIVGFARQGFHKEALS----LFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
             N  SWNS+I  + R G + EA++    LF       ++ D +T+P +L    S +D  
Sbjct: 82  KKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD-- 139

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
             K VH  + K GFE   FV  +L+ +Y++ G LD A  VF  M  KDV SW ++I+G  
Sbjct: 140 -GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFC 198

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
            +G+   AL   + M+  G+  D + V+SIL  CA+   +  G  +H   LK G  S + 
Sbjct: 199 QNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVF 258

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
           V N+L+ +Y+K G + DA  VFD M  RD+++W ++I    QN     AL+F+  M   G
Sbjct: 259 VSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGG 318

Query: 534 TKPDYITFVGL--LFA------CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
            +PD +T V L  +F+       S + L    R  +   D V G          ++++  
Sbjct: 319 IRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIG--------NALVNMYA 370

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA--ANNLFELEPMNAMP- 642
           + G +  A  + DQ+    D   W  L++    +G   L   A  A N+ E E  + +P 
Sbjct: 371 KLGYMNCAHTVFDQL-PRKDTISWNTLVTGYTQNG---LASEAIDAYNMME-ECRDTIPN 425

Query: 643 ---YVQLSNMYSTAGKWEDAARVR-KLMKS 668
              +V +   YS  G  +   ++  KL+K+
Sbjct: 426 QGTWVSIIPAYSHVGALQQGMKIHAKLIKN 455



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 113/500 (22%), Positives = 198/500 (39%), Gaps = 115/500 (23%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN-----E 92
           +  ALV+ ++  G ++ A  +F+++  +D  +WNT++  Y  +G   EA   +N      
Sbjct: 361 IGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECR 420

Query: 93  TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
               N  TW S+I  YS+                                    G LQ+G
Sbjct: 421 DTIPNQGTWVSIIPAYSHV-----------------------------------GALQQG 445

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
            + H   IK    L+ FV T L+D+Y KC  + +A  LF   P   + V W  +I     
Sbjct: 446 MKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTS-VPWNAIIASLGI 504

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYV 272
           +G G +A++ F+DM  E V+++  TF S+L+AC+                          
Sbjct: 505 HGRGEEALQLFKDMLAERVKADHITFVSLLSACS-------------------------- 538

Query: 273 QSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI 332
            S L+D   KC D+       EY    +   +  M+    R G+ ++A  L + M    I
Sbjct: 539 HSGLVDEGQKCFDIMQK----EYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNM---PI 591

Query: 333 KIDDFTYPSVLNC--FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
           + D   + ++L+      N +L    S   L V +   GY  +   L ++YA     +  
Sbjct: 592 QPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVL---LSNIYANTEKWEGV 648

Query: 391 FMVFNLMQDKDV---ISWTSLI---------TGCAYHGSYEEALKYF----SDMRISGIC 434
             V +L +D+ +     W+S++         TG   H  Y E  K      + M+  G  
Sbjct: 649 IKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYV 708

Query: 435 PDHVVV---------SSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
           PD+  V           IL++ +E   + FG       + +   S + +  +L +    C
Sbjct: 709 PDYSFVYQDIEEDEKEQILNSHSERLAIAFG------IISTPPRSPIRIFKNLRV----C 758

Query: 486 GCINDANRVFDSMHTRDVIT 505
           G  ++A +    +  R+++ 
Sbjct: 759 GDCHNATKYISRISEREIVV 778


>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 272/741 (36%), Positives = 423/741 (57%), Gaps = 6/741 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +++ +   G L EA  +F +   ++ F+W+ L+ GY+  G   EA  L+ +M   G R
Sbjct: 133 NALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIR 192

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  YT   VLR C     L RG + H + I+  F+ +  VV  L+ MY KC  IF A  +
Sbjct: 193 PDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLV 252

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P  ++ ++W  MI+GY +N    + +  F  MR   V+ +  T  S+++AC A+  
Sbjct: 253 FDRMPR-RDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGD 311

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              G +VHG ++ +GF A V V ++LI M++  G  D A  +    E  + VSW +MI G
Sbjct: 312 ERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISG 371

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           + + G  ++A+  +  M    +  D+ T  SVL+  A    L+    +H    +TG   Y
Sbjct: 372 YEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSY 431

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
             V N+LIDMY+K   +D A  VF+ + +K+VISWTS+I G   +    EAL +F  M +
Sbjct: 432 VIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMIL 491

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
           S + P+ V + S+LSACA +  L  G+++HA  L++G      + N+L+ +Y +CG +  
Sbjct: 492 S-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEP 550

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           A   F+S   +DV +W  L+ G AQ GKG  A++ + +M+     PD ITF  LL ACS 
Sbjct: 551 AWNQFNSCE-KDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSR 609

Query: 551 AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
           +G+  +   YFESM+  + I P   HYA ++DLLGR+G+L +A   + +M  +PD  +W 
Sbjct: 610 SGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWG 669

Query: 611 ALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRG 670
           ALL+ACR++ ++ELGE AA ++FE++  +   Y+ L N+Y+ +GKW++ ARVRK+M+   
Sbjct: 670 ALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENR 729

Query: 671 IRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVE 730
           +  +PGCSWVE   QVH F++ D  HP   +I + ++     ++  G     +    +++
Sbjct: 730 LTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMSKDSRRDDID 789

Query: 731 EEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILR 790
               EI    HSE+LA+AFGL+    G PI + KNL +C +CH  +K+IS V  R I +R
Sbjct: 790 ASKAEI-FCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRGISVR 848

Query: 791 DSNRFHHFKAGNCSCGD--YW 809
           D+ +FHHFK G CSCGD  YW
Sbjct: 849 DTEQFHHFKDGVCSCGDEGYW 869



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 173/563 (30%), Positives = 285/563 (50%), Gaps = 38/563 (6%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           +LRLC  K     G + H Y  KT   L   +   L+ M+ +   + EA Y+F    + +
Sbjct: 100 LLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAE-R 158

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           +  +W  ++ GY++ GY  +A+  +  M   G+  + +TFP +L  C  +     G +VH
Sbjct: 159 DLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVH 218

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
             ++  GFE++V V +ALI MY KCGD+ SAR + +     + +SWN+MI G+       
Sbjct: 219 LHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCL 278

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           E L LF  M    +  D  T  SV++   +  D    + VH  ++KTGF     VNN+LI
Sbjct: 279 EGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLI 338

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
            M++  G  D A MVF+ M+ KD++SWT++I+G   +G  E+A++ ++ M   G+ PD +
Sbjct: 339 QMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEI 398

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
            ++S+LSACA L +L+ G  +H    ++G  S + V NSL+ +Y+KC CI+ A  VF  +
Sbjct: 399 TIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRI 458

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG-LAENA 557
             ++VI+WT++I+G   N +  EAL F+ QM+    KP+ +T V +L AC+  G L+   
Sbjct: 459 PNKNVISWTSIILGLRLNYRSFEALFFFQQMIL-SLKPNSVTLVSVLSACARIGALSCGK 517

Query: 558 RWYFESMDKVYG------------------IKPGPDHY-ACMIDL---------LGRSGK 589
             +  ++    G                  ++P  + + +C  D+           + GK
Sbjct: 518 EIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCEKDVASWNILLTGYAQQGK 577

Query: 590 LIEAKALLDQMVGE---PDATVWKALLSACRVHGDLELGE---RAANNLFELEPMNAMPY 643
              A  L  +M+     PD   + +LL AC   G +  G     +  + F + P N   Y
Sbjct: 578 GGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAP-NLKHY 636

Query: 644 VQLSNMYSTAGKWEDAARVRKLM 666
             + ++   AG+ EDA    K M
Sbjct: 637 ASVVDLLGRAGRLEDAYEFIKKM 659



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 113/349 (32%), Positives = 188/349 (53%)

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           KA+     M+   V   + T+ ++L  C    A   G++VH  +  +     V + +AL+
Sbjct: 77  KALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALL 136

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
            M+ + GDL  A  +       +  SWN ++ G+A+ G+  EAL+L+ +M    I+ D +
Sbjct: 137 SMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVY 196

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           T+P VL       DL   + VH  +++ GFE    V NALI MY K G++  A +VF+ M
Sbjct: 197 TFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRM 256

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
             +D ISW ++I+G   +    E L+ F  MR   + PD + ++S++SAC  L     G+
Sbjct: 257 PRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGR 316

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
           +VH   +K+G  + +SV+NSL+ +++  GC ++A  VF  M  +D+++WTA+I G  +NG
Sbjct: 317 EVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNG 376

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDK 566
             ++A++ Y  M   G  PD IT   +L AC+  GL +      E  D+
Sbjct: 377 LPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADR 425



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/351 (23%), Positives = 137/351 (39%), Gaps = 54/351 (15%)

Query: 407 SLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
           SLI      G  E+AL +   M+   +  +     ++L  C        G +VH+   K+
Sbjct: 64  SLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKT 123

Query: 467 GGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFY 526
                + + N+L+ ++ + G + +A  VF  M  RD+ +W  L+ G A+ G   EAL  Y
Sbjct: 124 VTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLY 183

Query: 527 DQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKV-YGIKPGPDHYACMIDLLG 585
            +ML  G +PD  TF  +L  C   GL + AR     +  + YG +   D    +I +  
Sbjct: 184 HRMLWVGIRPDVYTFPCVLRTC--GGLPDLARGREVHLHVIRYGFESDVDVVNALITMYV 241

Query: 586 RSGKLIEAKALLDQMVG----------------------------------EPDATVWKA 611
           + G +  A+ + D+M                                    +PD     +
Sbjct: 242 KCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTS 301

Query: 612 LLSACRVHGDLELGERAANNLFELEPMNAMPYVQ-LSNMYSTAGKWEDAARVRKLMKSRG 670
           ++SAC   GD  LG      + +   +  +     L  M+S+ G W++A  V   M+ + 
Sbjct: 302 VISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKD 361

Query: 671 IRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPD 721
           +      SW    S       E  G P       K  E   +++  G VPD
Sbjct: 362 L-----VSWTAMISGY-----EKNGLP------EKAVETYTIMEHEGVVPD 396



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 2/145 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           DGF  N ++  Y   GR+  A   FN    K+  +W+ L+ GY+  G    A ELF +M 
Sbjct: 531 DGFLPNALLDMYVRCGRMEPAWNQFNSCE-KDVASWNILLTGYAQQGKGGLAVELFHKMI 589

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRG-EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
                P + T  ++L  CS  G++  G E F     K     N      +VD+  +   +
Sbjct: 590 ESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRL 649

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITG 209
            +A    K  P   +   W  ++  
Sbjct: 650 EDAYEFIKKMPIDPDPAIWGALLNA 674


>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 270/738 (36%), Positives = 404/738 (54%), Gaps = 73/738 (9%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +++ YA  G L+E +++F+    KN + W+ ++  Y+  G   E+  LF  M  +G    
Sbjct: 2   LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKG---- 57

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
                       ++G  +R E                                 A  LF 
Sbjct: 58  ------------IEG--KRSES--------------------------------ASELFD 71

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
              D ++ ++W +MI+GY  NG   + +  ++ M   G++ +  T  S+L  CA      
Sbjct: 72  KLCD-RDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLS 130

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G  VH   + S FE  +   + L+DMY+KCGDLD A R+ E     N VSW SMI G+ 
Sbjct: 131 LGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYT 190

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
           R G+   A+ L ++M    +K+D     S+L+  A +  L+N K VH  I         F
Sbjct: 191 RDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLF 250

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           V NAL+DMYAK G+++ A  VF+ M  KD+ISW +++                       
Sbjct: 251 VCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV---------------------GE 289

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
           + PD   ++ IL ACA L+ LE G+++H   L++G  S   V N+LV +Y KCG +  A 
Sbjct: 290 LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 349

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
            +FD + ++D+++WT +I G   +G G EA+  +++M   G +PD ++F+ +L+ACSH+G
Sbjct: 350 LLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 409

Query: 553 LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
           L E    +F  M   + I+P  +HYACM+DLL R+G L +A   ++ +   PDAT+W AL
Sbjct: 410 LLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGAL 469

Query: 613 LSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIR 672
           L  CR++ D+EL E+ A  +FELEP N   YV L+N+Y+ A KWE+  R+R+ +  +G+R
Sbjct: 470 LCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLR 529

Query: 673 KEPGCSWVETNSQVHIFIS-EDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEE 731
           K PGCSW+E   +V++F+S  +  HP    I S + ++   +KE GY P   +AL N +E
Sbjct: 530 KNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADE 589

Query: 732 EGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRD 791
             KE+ L  HSEKLA+AFGLLTLP    IR+ KNLRVCGDCH   K++S    R I+LRD
Sbjct: 590 MQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRD 649

Query: 792 SNRFHHFKAGNCSCGDYW 809
           SNRFHHFK G CSC  +W
Sbjct: 650 SNRFHHFKDGYCSCRGFW 667



 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 145/490 (29%), Positives = 244/490 (49%), Gaps = 44/490 (8%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLRE-------------------- 85
           ++  G++ E  ++F+ M  ++ + WN M++ YA  G  +E                    
Sbjct: 6   YATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRSES 65

Query: 86  AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL 145
           A +LF++   ++  +W+S+I GY + GL      ++ QM   G      T+ +VL  C+ 
Sbjct: 66  ASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAK 125

Query: 146 KGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTT 205
            G L  G+  H  AIK+ F+        L+DMY+KC  +  A  +F+   + +N V+WT+
Sbjct: 126 SGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGE-RNVVSWTS 184

Query: 206 MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
           MI GY+++G+   AI   + M  EGV+ +     SIL ACA   + D G  VH  I ++ 
Sbjct: 185 MIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANN 244

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
             +N++V +AL+DMYAKCG ++ A  +     + + +SWN+M+                 
Sbjct: 245 MASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV----------------- 287

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
                ++K D  T   +L   AS   L   K +H  I++ G+   + V NAL+D+Y K G
Sbjct: 288 ----GELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG 343

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
            L  A ++F+++  KD++SWT +I G   HG   EA+  F++MR +GI PD V   SIL 
Sbjct: 344 VLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILY 403

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAKCGCINDANRVFDSMH-TRDV 503
           AC+   +LE G +   +          L     +V + ++ G ++ A +  +++    D 
Sbjct: 404 ACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDA 463

Query: 504 ITWTALIMGC 513
             W AL+ GC
Sbjct: 464 TIWGALLCGC 473



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 172/366 (46%), Gaps = 46/366 (12%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           NT++  Y+  G L  A ++F +   +N  +W+S+I GY+  G    A  L  QM+ EG +
Sbjct: 152 NTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVK 211

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
                + ++L  C+  G L  G+  H Y        N FV   L+DMYAKC  +  A  +
Sbjct: 212 LDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSV 271

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F      K+ ++W TM                     V  ++ +  T   IL ACA++SA
Sbjct: 272 FSTMVV-KDIISWNTM---------------------VGELKPDSRTMACILPACASLSA 309

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            + G ++HG IL +G+ ++ +V +AL+D+Y KCG L  AR L +     + VSW  MI G
Sbjct: 310 LERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAG 369

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           +   G+  EA++ F +M    I+ D+ ++ S+L   +           HS +++ G+  +
Sbjct: 370 YGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS-----------HSGLLEQGWRFF 418

Query: 371 KFVNN------------ALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGS 417
             + N             ++D+ ++ GNL  A+  +  L    D   W +L+ GC  +  
Sbjct: 419 YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHD 478

Query: 418 YEEALK 423
            E A K
Sbjct: 479 IELAEK 484



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 158/344 (45%), Gaps = 55/344 (15%)

Query: 20  IGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAY- 77
           +G A ++  + +S +   + +  L+D +S  G++D A ++FEKM +R+  +W +MIA Y 
Sbjct: 131 LGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYT 190

Query: 78  ----------------------------------ANSGRLREAKKLFN----ETPFKNFF 99
                                             A SG L   K + +         N F
Sbjct: 191 RDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLF 250

Query: 100 TWSSLIYGYSNYGLDIEAFELF----------WQMQLEGYRPSQYTLDNVLRLCSLKGLL 149
             ++L+  Y+  G    A  +F          W   +   +P   T+  +L  C+    L
Sbjct: 251 VCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACILPACASLSAL 310

Query: 150 QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
           +RG++ HGY ++  +  +  V   LVD+Y KC  +  A  LF M P  K+ V+WT MI G
Sbjct: 311 ERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPS-KDLVSWTVMIAG 369

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF--E 267
           Y  +GYG +AI  F +MR  G+E ++ +F SIL AC+     + G +    I+ + F  E
Sbjct: 370 YGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIE 428

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIVG 310
             +   + ++D+ ++ G+L  A + +E   I  + + W +++ G
Sbjct: 429 PKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCG 472


>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Glycine max]
          Length = 1033

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 287/774 (37%), Positives = 449/774 (58%), Gaps = 36/774 (4%)

Query: 42   ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
            ALV  F+  G ID A  +FE+M DR+  T N ++   A   +  EA K+F E   K+   
Sbjct: 290  ALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKE--MKDLVE 347

Query: 101  WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
             ++     S+Y + + AF  F  ++ EG R                    +G++ H Y I
Sbjct: 348  INA-----SSYAVLLSAFTEFSNLK-EGKR--------------------KGQEVHAYLI 381

Query: 161  KTCF-DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
            +    D+   +   LV++YAKC  I  A  +F++ P  K+ V+W ++I+G   N    +A
Sbjct: 382  RNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMP-SKDTVSWNSIISGLDHNERFEEA 440

Query: 220  IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
            + CF  MR  G+  ++F+  S L++CA++     G Q+HG  +  G + +V V +AL+ +
Sbjct: 441  VACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTL 500

Query: 280  YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA-RQGFHKEALSLFKKMHARDIKIDDFT 338
            YA+   ++  +++       ++VSWNS I   A  +    +A+  F +M     K +  T
Sbjct: 501  YAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVT 560

Query: 339  YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL-DCAFMVFNLM 397
            + ++L+  +S   L   + +H+LI+K        + N L+  Y K   + DC  +   + 
Sbjct: 561  FINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMS 620

Query: 398  QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
            + +D +SW ++I+G  ++G   +A+     M   G   D   ++++LSACA +  LE G 
Sbjct: 621  ERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGM 680

Query: 458  QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
            +VHA  +++   + + V ++LV +YAKCG I+ A+R F+ M  R++ +W ++I G A++G
Sbjct: 681  EVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHG 740

Query: 518  KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY 577
             G +AL+ + QM   G  PD++TFVG+L ACSH GL +    +F+SM +VY + P  +H+
Sbjct: 741  HGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHF 800

Query: 578  ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA-CRVHG-DLELGERAANNLFEL 635
            +CM+DLLGR+G + + +  +  M   P+A +W+ +L A CR +  + ELG RAA  L EL
Sbjct: 801  SCMVDLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIEL 860

Query: 636  EPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG 695
            EP+NA+ YV LSNM++  GKWED    R  M++  ++KE GCSWV     VH+F++ D+ 
Sbjct: 861  EPLNAVNYVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQT 920

Query: 696  HPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLP 755
            HP +  IY K+ EIM  +++ GYVP+  +AL+++E E KE  L+YHSEKLA+AF +LT  
Sbjct: 921  HPEKEKIYDKLKEIMNKMRDLGYVPETKYALYDLELENKEELLSYHSEKLAIAF-VLTRQ 979

Query: 756  QGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
               PIRI KNLRVCGDCHTA KYIS +  R IILRDSNRFHHF  G CSC DYW
Sbjct: 980  SELPIRIIKNLRVCGDCHTAFKYISNIVNRQIILRDSNRFHHFDGGICSCQDYW 1033



 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 178/597 (29%), Positives = 309/597 (51%), Gaps = 28/597 (4%)

Query: 38  DLNRALVDFSNSGEIDEAGQL----FEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNET 93
           D NR    + +S  +++A QL    ++     D F  NT++  +  +G L  A+KLF+E 
Sbjct: 45  DYNR----YRDSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEM 100

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKG--LLQR 151
           P KN  +WS L+ GY+  G+  EA  LF  +   G  P+ Y + + LR C   G  +L+ 
Sbjct: 101 PQKNLVSWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKL 160

Query: 152 GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC-IFEAEYLFKMFPDGKNHVAWTTMITGY 210
           G + HG   K+ +  +  +   L+ MY+ C   I +A  +F+     K   +W ++I+ Y
Sbjct: 161 GMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIK-MKTSASWNSIISVY 219

Query: 211 SQNGYGFKAIECFRDMRVEGVE----SNQFTFPSILT-ACAAVS-ARDFGAQVHGCILSS 264
            + G    A + F  M+ E  E     N++TF S++T AC+ V        Q+   I  S
Sbjct: 220 CRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKS 279

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLF 324
            F  ++YV SAL+  +A+ G +DSA+ + E  +  N V+ N ++VG ARQ   +EA  +F
Sbjct: 280 SFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIF 339

Query: 325 KKMHARD-IKIDDFTYPSVLNCFASNIDLNNAK----SVHSLIVKTGF-EGYKFVNNALI 378
           K+M  +D ++I+  +Y  +L+ F    +L   K     VH+ +++    + +  + NAL+
Sbjct: 340 KEM--KDLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALV 397

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
           ++YAK   +D A  +F LM  KD +SW S+I+G  ++  +EEA+  F  MR +G+ P   
Sbjct: 398 NLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKF 457

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
            V S LS+CA L  +  GQQ+H   +K G    +SV N+L+ +YA+  C+ +  +VF  M
Sbjct: 458 SVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLM 517

Query: 499 HTRDVITWTALIMGCAQNGKGK-EALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENA 557
              D ++W + I   A +     +A++++ +M+  G KP+ +TF+ +L A S   L E  
Sbjct: 518 PEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELG 577

Query: 558 RWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
           R     + K + +         ++   G+  ++ + + +  +M    D   W A++S
Sbjct: 578 RQIHALILK-HSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMIS 633



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 168/378 (44%), Gaps = 57/378 (15%)

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVI 403
           N +  +  + +A  +H  I KTG     F  N L++++ + GNL  A  +F+ M  K+++
Sbjct: 47  NRYRDSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLV 106

Query: 404 SWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL--TVLEFGQQVHA 461
           SW+ L++G A +G  +EA   F  +  +G+ P+H  + S L AC EL   +L+ G ++H 
Sbjct: 107 SWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHG 166

Query: 462 VFLKSGGCSSLSVDNSLVLVYAKC-GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGK 520
           +  KS   S + + N L+ +Y+ C   I+DA RVF+ +  +   +W ++I    + G   
Sbjct: 167 LISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAI 226

Query: 521 EALQFYDQMLARGT----KPDYITFVGLL-FACS-------------------------- 549
            A + +  M    T    +P+  TF  L+  ACS                          
Sbjct: 227 SAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLY 286

Query: 550 ----------HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ 599
                       GL ++A+  FE MD    +         M+  L R  +  EA  +  +
Sbjct: 287 VGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMN----GLMVG-LARQHQGEEAAKIFKE 341

Query: 600 M--VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYV------QLSNMYS 651
           M  + E +A+ +  LLSA     +L+ G+R    +      NA+  V       L N+Y+
Sbjct: 342 MKDLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYA 401

Query: 652 TAGKWEDAARVRKLMKSR 669
                ++A  + +LM S+
Sbjct: 402 KCNAIDNARSIFQLMPSK 419


>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 273/691 (39%), Positives = 414/691 (59%), Gaps = 22/691 (3%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGE-QFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           PS Y  ++   L S  G L   +  FH       F  N      L++ YAK   I  A  
Sbjct: 42  PSTYLSNHFTLLYSKCGSLHNAQTSFHLTQYPNVFSYNT-----LINAYAKHSLIHIARR 96

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +F   P   + V++ T+I  Y+  G     +  F ++R   +  + FT   ++TAC    
Sbjct: 97  VFDEIPQ-PDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLGLDGFTLSGVITACGD-- 153

Query: 250 ARDFG--AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL-EYSEID--NEVSW 304
             D G   Q+H  ++  G +    V +A++  Y++ G L  ARR+  E  E    +EVSW
Sbjct: 154 --DVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSW 211

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N+MIV   +     EA+ LF++M  R +K+D FT  SVL  F    DL   +  H +++K
Sbjct: 212 NAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIK 271

Query: 365 TGFEGYKFVNNALIDMYAK-QGNLDCAFMVFNLMQDKDVISWTSLITGCA-YHGSYEEAL 422
           +GF G   V + LID+Y+K  G++     VF  +   D++ W ++I+G + Y    E+ L
Sbjct: 272 SGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGL 331

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG-GCSSLSVDNSLVLV 481
             F +M+ +G  PD      + SAC+ L+    G+QVHA+ +KS    + +SV+N+LV +
Sbjct: 332 WCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAM 391

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           Y+KCG ++DA RVFD+M   + ++  ++I G AQ+G   E+L+ ++ ML +   P+ ITF
Sbjct: 392 YSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITF 451

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
           + +L AC H G  E  + YF  M + + I+P  +HY+CMIDLLGR+GKL EA+ +++ M 
Sbjct: 452 IAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMP 511

Query: 602 GEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
             P +  W  LL ACR HG++EL  +AAN    LEP NA PYV LSNMY++A +WE+AA 
Sbjct: 512 FNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAPYVMLSNMYASAARWEEAAT 571

Query: 662 VRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPD 721
           V++LM+ RG++K+PGCSW+E + +VH+F++ED  HP+  +I+  + +++  +K+AGYVPD
Sbjct: 572 VKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIHVYMGKMLKKMKQAGYVPD 631

Query: 722 MNFAL---HNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKY 778
           + +AL     VE + +E  L YHSEKLAVAFGL++  +G PI + KNLR+CGDCH A+K 
Sbjct: 632 IRWALVKDEEVEPDERERRLLYHSEKLAVAFGLISTEEGVPILVVKNLRICGDCHNAVKL 691

Query: 779 ISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           ISA+  R I +RD++RFH FK G+CSC DYW
Sbjct: 692 ISALTGREITVRDTHRFHCFKEGHCSCRDYW 722



 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 145/524 (27%), Positives = 259/524 (49%), Gaps = 12/524 (2%)

Query: 16  RSKIIGPARYTHNVGNSVKPASDL-NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMI 74
           R  I G   +     + + P++ L N   + +S  G +  A   F      + F++NT+I
Sbjct: 23  RDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLTQYPNVFSYNTLI 82

Query: 75  AAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQY 134
            AYA    +  A+++F+E P  +  ++++LI  Y++ G       LF +++        +
Sbjct: 83  NAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLGLDGF 142

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
           TL  V+  C     L R  Q H + +    D  A V   ++  Y++   + EA  +F+  
Sbjct: 143 TLSGVITACGDDVGLVR--QLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFREM 200

Query: 195 PD--GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
            +  G++ V+W  MI    Q+  G +A+  FR+M   G++ + FT  S+LTA   V    
Sbjct: 201 GEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLV 260

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKC-GDLDSARRLLEYSEIDNEVSWNSMIVGF 311
            G Q HG ++ SGF  N +V S LID+Y+KC G +   R++ E     + V WN+MI GF
Sbjct: 261 GGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGF 320

Query: 312 A-RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           +  +   ++ L  F++M     + DD ++  V +  ++    +  K VH+L +K+     
Sbjct: 321 SLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYN 380

Query: 371 KF-VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
           +  VNNAL+ MY+K GN+  A  VF+ M + + +S  S+I G A HG   E+L+ F  M 
Sbjct: 381 RVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELML 440

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLVLVYAKCGC 487
              I P+ +   ++LSAC     +E GQ+ +   +K   C     ++   ++ +  + G 
Sbjct: 441 EKDIAPNSITFIAVLSACVHTGKVEEGQK-YFNMMKERFCIEPEAEHYSCMIDLLGRAGK 499

Query: 488 INDANRVFDSMH-TRDVITWTALIMGCAQNGKGKEALQFYDQML 530
           + +A R+ ++M      I W  L+  C ++G  + A++  ++ L
Sbjct: 500 LKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFL 543



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 127/512 (24%), Positives = 224/512 (43%), Gaps = 94/512 (18%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS-------- 288
           TF ++L AC A      G  +H     S    + Y+ +    +Y+KCG L +        
Sbjct: 11  TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLT 70

Query: 289 -----------------------ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
                                  ARR+ +     + VS+N++I  +A +G     L LF+
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFE 130

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           ++    + +D FT   V+     ++ L   + +H  +V  G + Y  VNNA++  Y+++G
Sbjct: 131 EVRELRLGLDGFTLSGVITACGDDVGL--VRQLHCFVVVCGHDCYASVNNAVLACYSRKG 188

Query: 386 NLDCAFMVFNLMQD---KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
            L  A  VF  M +   +D +SW ++I  C  H    EA+  F +M   G+  D   ++S
Sbjct: 189 FLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMAS 248

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC-GCINDANRVFDSMHTR 501
           +L+A   +  L  G+Q H + +KSG   +  V + L+ +Y+KC G + +  +VF+ +   
Sbjct: 249 VLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAP 308

Query: 502 DVITWTALIMGCA-QNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS----------- 549
           D++ W  +I G +      ++ L  + +M   G +PD  +FV +  ACS           
Sbjct: 309 DLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQV 368

Query: 550 HA-------------------------GLAENARWYFESMDKVYGIKPGPDHYAC----M 580
           HA                         G   +AR  F++M         P+H       M
Sbjct: 369 HALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTM---------PEHNTVSLNSM 419

Query: 581 IDLLGRSGKLIEAKALLDQMVGE---PDATVWKALLSACRVHGDLELGERAANNL---FE 634
           I    + G  +E+  L + M+ +   P++  + A+LSAC   G +E G++  N +   F 
Sbjct: 420 IAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFC 479

Query: 635 LEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
           +EP  A  Y  + ++   AGK ++A R+ + M
Sbjct: 480 IEP-EAEHYSCMIDLLGRAGKLKEAERIIETM 510


>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Glycine max]
          Length = 854

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 247/591 (41%), Positives = 354/591 (59%), Gaps = 5/591 (0%)

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID 278
           A+     M   GV ++  T+  ++  C A  A   G +VH  I S+G+    ++ + LI+
Sbjct: 269 AMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILIN 328

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
           MY K   L+ A+ L +     N VSW +MI  ++    +  A+ L   M    +  + FT
Sbjct: 329 MYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFT 388

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
           + SVL       DL   K +HS I+K G E   FV +ALID+Y+K G L  A  VF  M 
Sbjct: 389 FSSVLRACERLYDL---KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMM 445

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
             D + W S+I   A H   +EAL  +  MR  G   D   ++S+L AC  L++LE G+Q
Sbjct: 446 TGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQ 505

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK 518
            H   LK      L ++N+L+ +Y KCG + DA  +F+ M  +DVI+W+ +I G AQNG 
Sbjct: 506 AHVHVLKFD--QDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGF 563

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA 578
             EAL  ++ M  +G KP++IT +G+LFACSHAGL     +YF SM+ +YGI PG +HY 
Sbjct: 564 SMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYG 623

Query: 579 CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM 638
           CM+DLLGR+ KL +   L+ +M  EPD   W+ LL ACR   +++L   AA  + +L+P 
Sbjct: 624 CMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATYAAKEILKLDPQ 683

Query: 639 NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPL 698
           +   YV LSN+Y+ + +W D A VR+ MK RGIRKEPGCSW+E N Q+H FI  D+ HP 
Sbjct: 684 DTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIHAFILGDKSHPQ 743

Query: 699 RTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA 758
             +I  ++++ +  +  AGYVPD NF L ++E E +E  L YHSEKLA+ FG+++ P+  
Sbjct: 744 IDEINRQLNQFICRLAGAGYVPDTNFVLQDLEGEQREDSLRYHSEKLAIVFGIMSFPKEK 803

Query: 759 PIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            IRI+KNL++CGDCH   K I+ +  RHI++RD  R+HHF+ G CSCGDYW
Sbjct: 804 TIRIWKNLKICGDCHKFAKLIAELEQRHIVIRDPIRYHHFQDGVCSCGDYW 854



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 201/410 (49%), Gaps = 30/410 (7%)

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
           A  +   M+  G      T   +++ C   G ++ G++ H +     +    F+   L++
Sbjct: 269 AMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILIN 328

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           MY K   + EA+ LF   P+ +N V+WTTMI+ YS      +A+     M  +GV  N F
Sbjct: 329 MYVKFNLLEEAQVLFDKMPE-RNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMF 387

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           TF S+L AC  +       Q+H  I+  G E++V+V+SALID+Y+K G+L  A ++    
Sbjct: 388 TFSSVLRACERLYDL---KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREM 444

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              + V WNS+I  FA+     EAL L+K M       D  T  SVL    S   L   +
Sbjct: 445 MTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGR 504

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
             H  ++K  F+    +NNAL+DMY K G+L+ A  +FN M  KDVISW+++I G A +G
Sbjct: 505 QAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNG 562

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
              EAL  F  M++ G  P+H+ +  +L AC+           HA  +  G     S++N
Sbjct: 563 FSMEALNLFESMKVQGPKPNHITILGVLFACS-----------HAGLVNEGWYYFRSMNN 611

Query: 477 ------------SLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
                        ++ +  +   ++D  ++   M+   DV+TW  L+  C
Sbjct: 612 LYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDAC 661



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 185/358 (51%), Gaps = 30/358 (8%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N +I  Y     L EA+ LF++ P +N  +W+++I  YSN  L+  A  L   M  +
Sbjct: 321 FLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRD 380

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G  P+ +T  +VLR C     L   +Q H + +K   + + FV + L+D+Y+K   + EA
Sbjct: 381 GVMPNMFTFSSVLRACE---RLYDLKQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEA 437

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F+    G + V W ++I  ++Q+  G +A+  ++ MR  G  ++Q T  S+L AC +
Sbjct: 438 LKVFREMMTG-DSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTS 496

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           +S  + G Q H  +L   F+ ++ + +AL+DMY KCG L+ A+ +       + +SW++M
Sbjct: 497 LSLLELGRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTM 554

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I G A+ GF  EAL+LF+ M  +  K +  T   VL  FA +         H+ +V  G+
Sbjct: 555 IAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVL--FACS---------HAGLVNEGW 603

Query: 368 EGYKFVNN------------ALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGC 412
             ++ +NN             ++D+  +   LD    + + M  + DV++W +L+  C
Sbjct: 604 YYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDAC 661



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 101/183 (55%), Gaps = 3/183 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           + D F  + +I  Y+  G L EA K+F E    +   W+S+I  ++ +    EA  L+  
Sbjct: 415 ESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKS 474

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+  G+   Q TL +VLR C+   LL+ G Q H + +K  FD +  +   L+DMY KC  
Sbjct: 475 MRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLK--FDQDLILNNALLDMYCKCGS 532

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A+++F      K+ ++W+TMI G +QNG+  +A+  F  M+V+G + N  T   +L 
Sbjct: 533 LEDAKFIFNRMAK-KDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLF 591

Query: 244 ACA 246
           AC+
Sbjct: 592 ACS 594



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 10/217 (4%)

Query: 407 SLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
           SL+  C Y      A+     M   G+  D +  S ++  C     +  G++VH     +
Sbjct: 256 SLLNHC-YRRDLPSAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSN 314

Query: 467 GGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFY 526
           G      + N L+ +Y K   + +A  +FD M  R+V++WT +I   +       A++  
Sbjct: 315 GYHPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLL 374

Query: 527 DQMLARGTKPDYITFVGLLFACSHA-GLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
             M   G  P+  TF  +L AC     L +   W  +      G++      + +ID+  
Sbjct: 375 AFMFRDGVMPNMFTFSSVLRACERLYDLKQLHSWIMK-----VGLESDVFVRSALIDVYS 429

Query: 586 RSGKLIEA-KALLDQMVGEPDATVWKALLSACRVHGD 621
           + G+L+EA K   + M G  D+ VW ++++A   H D
Sbjct: 430 KMGELLEALKVFREMMTG--DSVVWNSIIAAFAQHSD 464



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 49/89 (55%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D+D    N ++  Y   G L +AK +FN    K+  +WS++I G +  G  +EA  LF  
Sbjct: 514 DQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFES 573

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
           M+++G +P+  T+  VL  CS  GL+  G
Sbjct: 574 MKVQGPKPNHITILGVLFACSHAGLVNEG 602


>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 264/648 (40%), Positives = 383/648 (59%), Gaps = 37/648 (5%)

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           N + W TM+ G++ +     A+E +  M   G   N ++FP +L +CA   A + G Q+H
Sbjct: 28  NLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKAFEEGRQIH 87

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE------------------------ 294
             +L  G   + YV ++LI MYA+ G L+ AR++ +                        
Sbjct: 88  AQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFR 147

Query: 295 -----YSEIDNE--VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFA 347
                + EI     VSWN+MI G+   G ++EAL LFK+M   +++ D+ T  SV++  A
Sbjct: 148 SARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACA 207

Query: 348 SNIDLNNAKSVHSLIVKT----GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVI 403
            +  +   + VHS +       GF     + NALID+Y+K G+++ AF +F  +  KDV+
Sbjct: 208 QSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVV 267

Query: 404 SWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVF 463
           SW +LI G  +   Y+EAL  F +M  SG CP+ V + S+L ACA L  ++ G+ +H   
Sbjct: 268 SWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYI 327

Query: 464 LKS--GGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKE 521
            K   G  +  S+  SL+ +YAKCG I  A++VF+SM  R + +W A+I G A +G+   
Sbjct: 328 DKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANA 387

Query: 522 ALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMI 581
           A   + +M     +PD ITFVGLL ACSH+GL +  R  F+SM + Y + P  +HY CMI
Sbjct: 388 AFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMI 447

Query: 582 DLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAM 641
           DLLG SG   EA+ ++  M  EPD  +W +LL AC+ HG+LEL E  A  L ++EP N+ 
Sbjct: 448 DLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSG 507

Query: 642 PYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTD 701
            YV LSN+Y+TAG+WED ARVR ++  +G++K PGCS +E +S VH FI  D+ HP R +
Sbjct: 508 SYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKLHPRRRE 567

Query: 702 IYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIR 761
           IY  ++E+ + ++EAG+ PD +  L  +EEE KE  L +HSEKLA+AFGL++   G  + 
Sbjct: 568 IYHMLEEMDVQLEEAGFAPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLT 627

Query: 762 IFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           I KNLRVC +CH A K IS +Y R I+ RD  RFHHF+ G CSC DYW
Sbjct: 628 IVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 675



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 137/514 (26%), Positives = 238/514 (46%), Gaps = 69/514 (13%)

Query: 55  AGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLD 114
           A  +FE + + +   WNTM+  +A+S                                  
Sbjct: 17  AISVFETIQEPNLLIWNTMLRGHASSSD-------------------------------P 45

Query: 115 IEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
           + A E++ +M   G+ P+ Y+   +L+ C+     + G Q H   +K    L+ +V T L
Sbjct: 46  VSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSL 105

Query: 175 VDMYAKCKCIFEAEYLF----------------------------KMFPD--GKNHVAWT 204
           + MYA+   + +A  +F                            K+F +   ++ V+W 
Sbjct: 106 ISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWN 165

Query: 205 TMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS 264
            MITGY +NG   +A+E F++M    V  ++ T  S+++ACA   + + G QVH  +   
Sbjct: 166 AMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDD 225

Query: 265 ----GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEA 320
               GF +++ + +ALID+Y+KCGD+++A  L E     + VSWN++I G+     +KEA
Sbjct: 226 DDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEA 285

Query: 321 LSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK--TGFEGYKFVNNALI 378
           L LF++M       +D T  SVL   A    ++  + +H  I K   G      +  +LI
Sbjct: 286 LLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLI 345

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
           DMYAK G+++ A  VFN M  + + SW ++I G A HG    A   FS MR + + PD +
Sbjct: 346 DMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDI 405

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAKCGCINDANRVFDS 497
               +LSAC+   +L+ G+Q+     +    +  L     ++ +    G   +A  +  +
Sbjct: 406 TFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHT 465

Query: 498 MHTR-DVITWTALIMGCAQNGKGKEALQFYDQML 530
           M    D + W +L+  C ++G  + A  F  +++
Sbjct: 466 MPMEPDGVIWCSLLKACKKHGNLELAESFAQKLI 499



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 221/452 (48%), Gaps = 31/452 (6%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++ +G +++A ++F+  S RD  +   +I  YA+ G  R A+K+F+E   ++  +W+++I
Sbjct: 109 YARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMI 168

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC-- 163
            GY   G   EA ELF +M     RP + TL +V+  C+  G ++ G Q H +       
Sbjct: 169 TGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDD 228

Query: 164 --FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIE 221
             F  +  +V  L+D+Y+KC  +  A  LF+     K+ V+W T+I GY+      +A+ 
Sbjct: 229 HGFSSSLKIVNALIDLYSKCGDVETAFGLFEGL-SCKDVVSWNTLIGGYTHTNLYKEALL 287

Query: 222 CFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS--SGFEANVYVQSALIDM 279
            F++M   G   N  T  S+L ACA + A D G  +H  I     G      ++++LIDM
Sbjct: 288 LFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDM 347

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           YAKCGD+++A ++       +  SWN+MI GFA  G    A  LF +M    ++ DD T+
Sbjct: 348 YAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITF 407

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN-----ALIDMYAKQGNL-DCAFMV 393
             +L+  + +  L+  +     I K+  + Y           +ID+    G   +   M+
Sbjct: 408 VGLLSACSHSGLLDLGRQ----IFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMI 463

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD----HVVVSSILSACAE 449
             +  + D + W SL+  C  HG+ E A  +    ++  I P+    +V++S+I +    
Sbjct: 464 HTMPMEPDGVIWCSLLKACKKHGNLELAESF--AQKLIKIEPENSGSYVLLSNIYATAGR 521

Query: 450 LTVLEFGQQVHAVFLKSG-----GCSSLSVDN 476
               E   +V  V    G     GCSS+ VD+
Sbjct: 522 ---WEDVARVRGVLNGKGMKKVPGCSSIEVDS 550



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 181/371 (48%), Gaps = 37/371 (9%)

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           L  A  + E  +  N + WN+M+ G A       AL ++ +M +     + +++P +L  
Sbjct: 14  LPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKS 73

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
            A +      + +H+ ++K G    ++V+ +LI MYA+ G L+ A  VF+    +DV+S 
Sbjct: 74  CAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSC 133

Query: 406 TSLITGCAY-------------------------------HGSYEEALKYFSDMRISGIC 434
           T+LITG A                                +G YEEAL+ F +M  + + 
Sbjct: 134 TALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVR 193

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHA----VFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
           PD   + S++SACA+   +E G+QVH+         G  SSL + N+L+ +Y+KCG +  
Sbjct: 194 PDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVET 253

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           A  +F+ +  +DV++W  LI G       KEAL  + +ML  G  P+ +T + +L AC+H
Sbjct: 254 AFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAH 313

Query: 551 AGLAENARWYFESMD-KVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
            G  +  RW    +D K+ G+         +ID+  + G +  A  + + M+    ++ W
Sbjct: 314 LGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSS-W 372

Query: 610 KALLSACRVHG 620
            A++    +HG
Sbjct: 373 NAMIFGFAMHG 383


>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
          Length = 818

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 267/744 (35%), Positives = 412/744 (55%), Gaps = 20/744 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N ++  Y   G L  A++LF+  P +N  ++ +L+  ++  G    A  LF +++
Sbjct: 95  DLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLR 154

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            EG+  +Q+ L  +L+L             H  A K   D NAFV +GL+D Y+ C  + 
Sbjct: 155 WEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVS 214

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +AE++F      K+ V WT M++ YS+N     A  C +                   +C
Sbjct: 215 DAEHVFNGIVR-KDAVVWTAMVSCYSENDCPENAFRCAQ-------------------SC 254

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           + ++       +HGC + +  +   +V  AL+DMYAKCGD+  AR   E    D+ +  +
Sbjct: 255 SLLAISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLS 314

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
            MI  +A+   +++A  LF ++    +  ++++  SVL    + + L+  K +H+  +K 
Sbjct: 315 FMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKI 374

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G E   FV NAL+D YAK  ++D +  +F+ ++D + +SW +++ G +  G  EEAL  F
Sbjct: 375 GHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVF 434

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
            +M+ + +    V  SS+L ACA    +    Q+H    KS   +   + NSL+  YAKC
Sbjct: 435 CEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKC 494

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G I DA +VF  +  RD+I+W A+I G A +G+  +AL+ +D+M     + + ITFV LL
Sbjct: 495 GYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALL 554

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
             C   GL  +    F+SM   +GIKP  +HY C++ LLGR+G+L +A   +  +   P 
Sbjct: 555 SVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPS 614

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
           A VW+ALLS+C +H ++ LG  +A  + E+EP +   YV LSNMY+ AG  +  A +RK 
Sbjct: 615 AMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKS 674

Query: 666 MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFA 725
           M++ G+RK PG SWVE   ++H F      HP    I + ++ + L     GY+PD+N  
Sbjct: 675 MRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVV 734

Query: 726 LHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLR 785
           LH+V++E K   L  HSE+LA+A+GL+  P G PIRI KNLR C DCHTA   IS +  R
Sbjct: 735 LHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKR 794

Query: 786 HIILRDSNRFHHFKAGNCSCGDYW 809
            II+RD NRFHHF+ G CSCGDYW
Sbjct: 795 EIIVRDINRFHHFEDGKCSCGDYW 818



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 152/513 (29%), Positives = 252/513 (49%), Gaps = 24/513 (4%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D + F  + +I AY+    + +A+ +FN    K+   W++++  YS       AF     
Sbjct: 194 DHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAF----- 248

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
                 R +Q         CSL  +    +  HG AIKT  D    V   L+DMYAKC  
Sbjct: 249 ------RCAQS--------CSLLAISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGD 294

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I +A   F+M P   + +  + MI+ Y+Q+    +A E F  +    V  N+++  S+L 
Sbjct: 295 IKDARLAFEMIP-YDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQ 353

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC  +   DFG Q+H   +  G E++++V +AL+D YAKC D+DS+ ++       NEVS
Sbjct: 354 ACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVS 413

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN+++VGF++ G  +EALS+F +M A  +     TY SVL   AS   + +A  +H  I 
Sbjct: 414 WNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIE 473

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K+ F     + N+LID YAK G +  A  VF  + ++D+ISW ++I+G A HG   +AL+
Sbjct: 474 KSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALE 533

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV-HAVFLKSGGCSSLSVDNSLVLVY 482
            F  M  S +  + +   ++LS C    ++  G  +  ++ +  G   S+     +V + 
Sbjct: 534 LFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLL 593

Query: 483 AKCGCINDANR-VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
            + G +NDA + + D       + W AL+  C  + K     +F  + +      D  T+
Sbjct: 594 GRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIH-KNVALGRFSAEKILEIEPQDETTY 652

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
           V L    + AG  +      +SM  + G++  P
Sbjct: 653 VLLSNMYAAAGSLDQVALLRKSMRNI-GVRKVP 684



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 209/401 (52%), Gaps = 9/401 (2%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G   + ++D +      ++  YA  G +++A+  F   P+ +    S +I  Y+    + 
Sbjct: 268 GCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNE 327

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           +AFELF ++      P++Y+L +VL+ C+    L  G+Q H +AIK   + + FV   L+
Sbjct: 328 QAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALM 387

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           D YAKC  +  +  +F    D  N V+W T++ G+SQ+G G +A+  F +M+   +   Q
Sbjct: 388 DFYAKCNDMDSSLKIFSSLRDA-NEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQ 446

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            T+ S+L ACA+ ++     Q+H  I  S F  +  + ++LID YAKCG +  A ++ ++
Sbjct: 447 VTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQH 506

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               + +SWN++I G+A  G   +AL LF +M+  +++ +D T+ ++L+   S   +N+ 
Sbjct: 507 LMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHG 566

Query: 356 KSV-HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM-VFNLMQDKDVISWTSLITGCA 413
            S+  S+ +  G +        ++ +  + G L+ A   + ++      + W +L++ C 
Sbjct: 567 LSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCI 626

Query: 414 YHGSYEEALKYFSDMRISGICPD----HVVVSSILSACAEL 450
            H +   AL  FS  +I  I P     +V++S++ +A   L
Sbjct: 627 IHKNV--ALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSL 665



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 30/217 (13%)

Query: 416 GSYEEALKYFSDMRIS-GICP-----DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
            +Y  AL++  D   S  I P     D    +  L  C        G+ VH   ++ GG 
Sbjct: 32  AAYAAALQWLEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGV 91

Query: 470 SSLSV--DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYD 527
             L +   N L+ +Y K G +  A R+FD M  R+++++  L+   AQ G  + A   + 
Sbjct: 92  GRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFR 151

Query: 528 QMLARGTKPD---YITFVGLLFACSHAGLA---ENARWYFESMDKVYGIKPGPDHYA--- 578
           ++   G + +     T + L  A   AGLA    +  W           K G DH A   
Sbjct: 152 RLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAW-----------KLGHDHNAFVG 200

Query: 579 -CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
             +ID       + +A+ + + +V   DA VW A++S
Sbjct: 201 SGLIDAYSLCSLVSDAEHVFNGIV-RKDAVVWTAMVS 236



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 6/125 (4%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           +  +L+D ++  G I +A ++F+ + +RD  +WN +I+ YA  G+  +A +LF+     N
Sbjct: 483 IGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSN 542

Query: 98  F----FTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRG 152
                 T+ +L+    + GL      LF  M+++ G +PS      ++RL    G L   
Sbjct: 543 VESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDA 602

Query: 153 EQFHG 157
            QF G
Sbjct: 603 LQFIG 607


>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Brachypodium distachyon]
          Length = 849

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 270/756 (35%), Positives = 434/756 (57%), Gaps = 8/756 (1%)

Query: 62  MSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELF 121
           ++D D F  N++++ Y   GR+ +A+K+F     +N  +W++L+   ++    +E F   
Sbjct: 94  LADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADPRRGLELFRDC 153

Query: 122 WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
            +       P + TL  VL +C+     + G   HG A+K+ +D    V   LVDMYAKC
Sbjct: 154 LEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKC 213

Query: 182 KCIFEAEYLFKMFPDG--KNHVAWTTMITGYSQNGYGFKAIECFRDMRVE--GVESNQFT 237
             + +AE  F   P G  +N V+W  M+ GY++NG    A    R+M++E  GV +++ T
Sbjct: 214 GEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEIT 273

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFE-ANVYVQSALIDMYAKCGDLDSARRLLEYS 296
             S+L  C+ +       ++H  ++  G       V +ALI  Y +CG L  A R+ +  
Sbjct: 274 MLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGI 333

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKM-HARDIKIDDFTYPSVLNCFASNIDLNNA 355
                 SWN++I   A+ G    A+ LF++M +A   K D F+  S+L    +   L + 
Sbjct: 334 CSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHG 393

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           K+ H  I++ G E   F+  +L+ +Y + G    A ++F+ +++KD +SW ++I G + +
Sbjct: 394 KAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQN 453

Query: 416 GSYEEALKYFSDM--RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
           G   E+L+ F +M  +  G  P  +  +S L AC+EL  +  G+++H   LK+  C    
Sbjct: 454 GLPGESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSF 513

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
           + +S++ +Y+KCG ++DA   FD +  +D ++WT +I G A NG+GKEA+  YD+M   G
Sbjct: 514 LSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREG 573

Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
            +PD  T++GLL AC HAG+ E+   +F+ M  +  I+   +HYAC+I +L R+G+  +A
Sbjct: 574 MEPDGFTYLGLLMACGHAGMLEDGLCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADA 633

Query: 594 KALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTA 653
            AL++ M  EPDA +  ++LSAC +HG++ELG++ A+ L ELEP  A  YV  SNMY+ +
Sbjct: 634 VALMEVMPEEPDAKILSSVLSACHMHGEVELGKKVADKLLELEPHKAEHYVLASNMYAGS 693

Query: 654 GKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLI 713
            +W++  +VRK+++  G+ KEPGCSW++   +V+ F++ +   P    +      +   I
Sbjct: 694 RQWDEMRKVRKMLRDAGVAKEPGCSWIDIAGKVYSFVAGENSLPEMHKVRKMWYSLEEKI 753

Query: 714 KEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCH 773
           + AGY PD    LH +EEE K   L +HSEK A+AFGLL       +R+FKN+R+C DCH
Sbjct: 754 RAAGYAPDTTVMLHELEEEEKVEALRWHSEKQAIAFGLLRTAGPTKVRVFKNIRMCKDCH 813

Query: 774 TAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            A K IS V  R I++RD  RFHHF+ G CSCGDYW
Sbjct: 814 NAAKLISKVADREIVVRDKKRFHHFRDGLCSCGDYW 849



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 183/362 (50%), Gaps = 22/362 (6%)

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRV--EGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
           W  ++   S+ G    A+     +    +GV  ++FT P  L +C      D G QVH  
Sbjct: 33  WNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRG----DDGRQVHAV 88

Query: 261 ILSSGF-EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKE 319
               G  + + +V ++L+ MY +CG +D A ++ E     N VSWN+++   A     + 
Sbjct: 89  AAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADP---RR 145

Query: 320 ALSLFKKMHARDI----KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
            L LF+     D+      D+ T  +VL   A+       ++VH L VK+G++    V+N
Sbjct: 146 GLELFRDC-LEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSN 204

Query: 376 ALIDMYAKQGNL---DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS- 431
            L+DMYAK G +   +CAF+       ++V+SW  ++ G A +G    A     +M++  
Sbjct: 205 VLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEE 264

Query: 432 -GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG-GCSSLSVDNSLVLVYAKCGCIN 489
            G+  D + + S+L  C+ L  L   +++HA  ++ G   +   V N+L+  Y +CGC+ 
Sbjct: 265 RGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLL 324

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML-ARGTKPDYITFVGLLFAC 548
            A RVFD + ++ V +W ALI   AQNG+   A++ + +M  A G KPD+ +   LL AC
Sbjct: 325 HACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLAC 384

Query: 549 SH 550
            +
Sbjct: 385 GN 386



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 158/331 (47%), Gaps = 23/331 (6%)

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARD--IKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           WN ++   +R G H +AL++  ++ A    +  D FT P  L     +   ++ + VH++
Sbjct: 33  WNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALK----SCRGDDGRQVHAV 88

Query: 362 IVKTGF-EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
             K G  +G  FV N+L+ MY + G +D A  VF  M  ++++SW +L+   A       
Sbjct: 89  AAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVA---DPRR 145

Query: 421 ALKYFSDM--RISGI-CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
            L+ F D    + G   PD   + ++L  CA L   E G+ VH + +KSG  ++  V N 
Sbjct: 146 GLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNV 205

Query: 478 LVLVYAKCGCINDANRVF---DSMHTRDVITWTALIMGCAQNGKGKEALQFYD--QMLAR 532
           LV +YAKCG + DA   F        R+V++W  ++ G A+NG+   A       QM  R
Sbjct: 206 LVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEER 265

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWY-FESMDKVYGIKPGPDHYA-CMIDLLGRSGKL 590
           G   D IT + +L  CS  GL E A+     +     G+    D     +I   GR G L
Sbjct: 266 GVPADEITMLSVLPVCS--GLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCL 323

Query: 591 IEAKALLDQMVGEPDATVWKALLSACRVHGD 621
           + A  + D +  +   + W AL+ A   +G+
Sbjct: 324 LHACRVFDGICSKM-VSSWNALIGAHAQNGE 353



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 92/188 (48%), Gaps = 30/188 (15%)

Query: 58  LFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEA 117
           LF+ + ++D  +WNTMIA Y+ +G   E+ +LF E   K    W SL+   S        
Sbjct: 431 LFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATS-------- 482

Query: 118 FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
                                 L  CS    ++ G++ H +A+K     ++F+ + ++DM
Sbjct: 483 ---------------------ALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDM 521

Query: 178 YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
           Y+KC  + +A   F      K+ V+WT MITGY+ NG G +A+  +  M  EG+E + FT
Sbjct: 522 YSKCGSVDDARVFFDRL-KAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFT 580

Query: 238 FPSILTAC 245
           +  +L AC
Sbjct: 581 YLGLLMAC 588



 Score = 45.8 bits (107), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 5/92 (5%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           L+ +++D +S  G +D+A   F+++  +D  +W  MI  YA +GR +EA  L+++   + 
Sbjct: 514 LSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREG 573

Query: 98  F----FTWSSLIYGYSNYGLDIEAFELFWQMQ 125
                FT+  L+    + G+  +    F +M+
Sbjct: 574 MEPDGFTYLGLLMACGHAGMLEDGLCFFQEMR 605


>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
 gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
          Length = 829

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 265/750 (35%), Positives = 417/750 (55%), Gaps = 14/750 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +++ YA+     +AK  F+    +N ++W+ L+  ++  G   E      +M+ +G R
Sbjct: 83  NHIVSMYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVR 142

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P   T    L  C     L+ G + H   + +  +++  V   L++MY KC  +  A+ +
Sbjct: 143 PDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRV 202

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F      +N ++W+ M   ++ +G  ++A+  FR M + G+++ +    +IL+AC++ + 
Sbjct: 203 FAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPAL 262

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE--IDNEVSWNSMI 308
              G  +H CI  SGFE+ + V +A++ MY +CG ++ AR++ +  +  + + VSWN M+
Sbjct: 263 VQDGRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIML 322

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
             +      K+A+ L+++M    ++ D  TY S+L+  +S  D+   + +H  IV    E
Sbjct: 323 SAYVHNDRGKDAIQLYQRMQ---LRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELE 379

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
               V NAL+ MYAK G+   A  VF+ M+ + +ISWT++I+         EA   F  M
Sbjct: 380 KNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQM 439

Query: 429 -------RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
                      + PD +   +IL+ACA+++ LE G+ V       G  S  +V  ++V +
Sbjct: 440 LELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNL 499

Query: 482 YAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           Y KCG I +  R+FD + +R DV  W A+I   AQ G+  EAL+ + +M   G +PD  +
Sbjct: 500 YGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFS 559

Query: 541 FVGLLFACSHAGLAENARWYFESMDKVY-GIKPGPDHYACMIDLLGRSGKLIEAKALLDQ 599
           FV +L ACSH GL +  + YF SM   Y  +     H+ C+ DLLGR G+L EA+  L++
Sbjct: 560 FVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEK 619

Query: 600 MVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDA 659
           +  +PDA  W +LL+ACR H DL+  +  AN L  LEP  A  YV LSN+Y+   KW   
Sbjct: 620 LPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAV 679

Query: 660 ARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYV 719
           A+VRK M  +G++KE G S +E    +H F + D  HP   +I  ++ ++   +KE GYV
Sbjct: 680 AKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYV 739

Query: 720 PDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYI 779
           PD    LH V+E+ KE  L  HSE+LA+A GL++ P G P+R+ KNLRVC DCHTA K I
Sbjct: 740 PDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLI 799

Query: 780 SAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           S +  R I++RD  RFH FK G CSC DYW
Sbjct: 800 SKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 829



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 198/400 (49%), Gaps = 19/400 (4%)

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF-EANVYVQSALIDMYAKC 283
           D+  + V +   T+  +L  CA   A   G ++H   +       N+ + + ++ MYA C
Sbjct: 33  DLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHC 92

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
                A+   +  E  N  SW  ++  FA  G  KE L   ++M    ++ D  T+ + L
Sbjct: 93  DSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITAL 152

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDV 402
                   L +   +H ++V +  E    V+NAL++MY K G+L  A  VF  M+  ++V
Sbjct: 153 GSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNV 212

Query: 403 ISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAV 462
           ISW+ +    A HG+  EAL++F  M + GI      + +ILSAC+   +++ G+ +H+ 
Sbjct: 213 ISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSC 272

Query: 463 FLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT--RDVITWTALIMGCAQNGKGK 520
              SG  S L V N+++ +Y +CG + +A +VFD+M    RDV++W  ++     N +GK
Sbjct: 273 IALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGK 332

Query: 521 EALQFYDQMLARGTKPDYITFVGLLFACSHA-----GLAENARWYFESMDKVYGIKPGPD 575
           +A+Q Y +M  R    D +T+V LL ACS A     G   + +   + ++K   +     
Sbjct: 333 DAIQLYQRMQLRA---DKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNA-- 387

Query: 576 HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
               ++ +  + G   EA+A+ D+M  +     W  ++SA
Sbjct: 388 ----LVSMYAKCGSHTEARAVFDKM-EQRSIISWTTIISA 422



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 139/293 (47%), Gaps = 5/293 (1%)

Query: 332 IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF-EGYKFVNNALIDMYAKQGNLDCA 390
           ++ ++ TY  +L   A    L   + +HSL VK     G   + N ++ MYA   +   A
Sbjct: 39  VRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDA 98

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
              F+ ++ +++ SWT L+   A  G  +E L+    MR  G+ PD V   + L +C + 
Sbjct: 99  KAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDP 158

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM-HTRDVITWTAL 509
             L  G ++H + + S       V N+L+ +Y KCG ++ A RVF  M  TR+VI+W+ +
Sbjct: 159 ESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIM 218

Query: 510 IMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG 569
               A +G   EAL+ +  ML  G K      V +L ACS   L ++ R    S   + G
Sbjct: 219 AGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR-LIHSCIALSG 277

Query: 570 IKPGPDHYACMIDLLGRSGKLIEAKALLDQM-VGEPDATVWKALLSACRVHGD 621
            +        ++ + GR G + EA+ + D M     D   W  +LSA  VH D
Sbjct: 278 FESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSA-YVHND 329



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 115/264 (43%), Gaps = 10/264 (3%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
           Q+     +++    N +++ YA  G   EA+ +F++   ++  +W+++I  Y    L  E
Sbjct: 372 QIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAE 431

Query: 117 AFELFWQM-QLEG------YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAF 169
           A  LF QM +LE        +P       +L  C+    L++G+     A       +  
Sbjct: 432 ACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKA 491

Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
           V T +V++Y KC  I E   +F       +   W  MI  Y+Q G   +A++ F  M +E
Sbjct: 492 VGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEME 551

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ--SALIDMYAKCGDLD 287
           GV  + F+F SIL AC+     D G      + +        +Q    + D+  + G L 
Sbjct: 552 GVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLK 611

Query: 288 SARRLLEYSEID-NEVSWNSMIVG 310
            A   LE   +  + V+W S++  
Sbjct: 612 EAEEFLEKLPVKPDAVAWTSLLAA 635


>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
 gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 273/743 (36%), Positives = 421/743 (56%), Gaps = 16/743 (2%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLD---IEAFELFWQMQLEGY 129
           ++  Y   G +  A+  F+    ++ + W+ +I GY   G     I  F LF  M   G 
Sbjct: 92  LVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLF--MLSSGL 149

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           +P   T  +VL+ C     +  G + H  A+K  F  + +V   L+ +Y +   +  A  
Sbjct: 150 QPDYRTFPSVLKACRN---VTDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARI 206

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           LF   P  ++  +W  MI+GY Q+G   +A+     +R      +  T  S+L+AC    
Sbjct: 207 LFDEMPT-RDMGSWNAMISGYCQSGNAKEALTLSDGLRA----MDSVTVVSLLSACTEAG 261

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
             + G  +H   +  G E+ ++V + LID+YA+ G L   +++ +   + + +SWNS+I 
Sbjct: 262 DFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIK 321

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG-FE 368
            +        A+ LF++M    I+ D  T  S+ +  +   ++   +SV    ++ G F 
Sbjct: 322 AYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFL 381

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
               + NA++ MYAK G +D A  VFN + +KDVISW ++I+G A +G   EA++ ++ M
Sbjct: 382 EDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIM 441

Query: 429 RISG--ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
              G  I  +     S+L AC++   L  G ++H   LK+G    + V  SL  +Y KCG
Sbjct: 442 EEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCG 501

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
            ++DA  +F  +   + + W  LI     +G G++A+  + +ML  G KPD+ITFV LL 
Sbjct: 502 RLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 561

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ACSH+GL +   W FE M   YGI P   HY CM+DL GR+G+L  A   +  M  +PDA
Sbjct: 562 ACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDA 621

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
           ++W ALLSACRVHG+++LG+ A+ +LFE+EP +   +V LSNMY++AGKWE    +R + 
Sbjct: 622 SIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIT 681

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFAL 726
             +G+RK PG S +E +++V +F + ++ HP+  ++Y ++  +   +K  GYVPD  F L
Sbjct: 682 SGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALHEKLKMVGYVPDHRFVL 741

Query: 727 HNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRH 786
            +VE++ KE  L  HSE+LA+AF L+T P    IRIFKNLRVCGDCH+  K+IS +  R 
Sbjct: 742 QDVEDDEKEHILMSHSERLAMAFALITTPAKTTIRIFKNLRVCGDCHSVTKFISKITERE 801

Query: 787 IILRDSNRFHHFKAGNCSCGDYW 809
           II+RDSNRFHHFK G CSCGDYW
Sbjct: 802 IIVRDSNRFHHFKNGVCSCGDYW 824



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 144/527 (27%), Positives = 251/527 (47%), Gaps = 43/527 (8%)

Query: 67  GFTWNTMIAA-----YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELF 121
           GF W+  +AA     Y   G +  A+ LF+E P ++  +W+++I GY   G   EA  L 
Sbjct: 180 GFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLS 239

Query: 122 WQMQLEGYRP-SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK 180
                +G R     T+ ++L  C+  G   RG   H Y+IK   +   FV   L+D+YA+
Sbjct: 240 -----DGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE 294

Query: 181 ------CKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
                 C+ +F+  Y+       ++ ++W ++I  Y  N    +AI  F++MR+  ++ +
Sbjct: 295 FGSLKDCQKVFDRMYV-------RDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPD 347

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSG-FEANVYVQSALIDMYAKCGDLDSARRLL 293
             T  S+ +  + +        V G  L  G F  ++ + +A++ MYAK G +DSAR + 
Sbjct: 348 CLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVF 407

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR--DIKIDDFTYPSVLNCFASNID 351
            +    + +SWN++I G+A+ GF  EA+ ++  M     +I  +  T+ SVL   +    
Sbjct: 408 NWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGA 467

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
           L     +H  ++K G     FV  +L DMY K G LD A  +F  +   + + W +LI  
Sbjct: 468 LRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIAC 527

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS- 470
             +HG  E+A+  F +M   G+ PDH+   ++LSAC+   +++ G+    +     G + 
Sbjct: 528 HGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITP 587

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGK---GKEALQFY 526
           SL     +V +Y + G +  A     SM  + D   W AL+  C  +G    GK A +  
Sbjct: 588 SLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHL 647

Query: 527 DQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPG 573
            ++     +P+++ +  LL        A   +W  E +D++  I  G
Sbjct: 648 FEV-----EPEHVGYHVLL----SNMYASAGKW--EGVDEIRSITSG 683



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 122/443 (27%), Positives = 214/443 (48%), Gaps = 18/443 (4%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N +I  YA  G L++ +K+F+    ++  +W+S+I  Y      + A  LF +M+L 
Sbjct: 283 FVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLS 342

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV-TGLVDMYAKCKCIFE 186
             +P   TL ++  + S  G ++      G+ ++  + L    +   +V MYAK   +  
Sbjct: 343 RIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS 402

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG--VESNQFTFPSILTA 244
           A  +F   P+ K+ ++W T+I+GY+QNG+  +AIE +  M  EG  + +NQ T+ S+L A
Sbjct: 403 ARAVFNWLPN-KDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPA 461

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C+   A   G ++HG +L +G   +V+V ++L DMY KCG LD A  L       N V W
Sbjct: 462 CSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPW 521

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIV 363
           N++I      G  ++A+ LFK+M    +K D  T+ ++L+ C  S +          +  
Sbjct: 522 NTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQT 581

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEAL 422
             G          ++D+Y + G L+ A      M    D   W +L++ C  HG+ +  L
Sbjct: 582 DYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVD--L 639

Query: 423 KYFSDMRISGICPDHVVVSSILSAC-AELTVLEFGQQVHAV-----FLKSGGCSSLSVDN 476
              +   +  + P+HV    +LS   A     E   ++ ++       K+ G SS+ VDN
Sbjct: 640 GKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDN 699

Query: 477 SLVLVYAKCGCINDANRVFDSMH 499
            + + Y      N  + +++ M+
Sbjct: 700 KVEVFYTG----NQTHPMYEEMY 718



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 173/421 (41%), Gaps = 88/421 (20%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +V ++  G +D A  +F  + ++D  +WNT+I+ YA +G   EA +++N        
Sbjct: 388 NAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYN-------- 439

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS--QYTLDNVLRLCSLKGLLQRGEQFHG 157
                                   M+ EG   S  Q T  +VL  CS  G L++G + HG
Sbjct: 440 -----------------------IMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHG 476

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
             +K    L+ FV T L DMY KC  + +A  LF   P   N V W T+I  +  +G+G 
Sbjct: 477 RLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPR-VNSVPWNTLIACHGFHGHGE 535

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSAL 276
           KA+  F++M  EGV+ +  TF ++L+AC+     D G      + +  G   ++     +
Sbjct: 536 KAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCM 595

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           +D+Y + G L+ A   ++   +  + S W +++      G                    
Sbjct: 596 VDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHG-------------------- 635

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
                        N+DL    S H   V+    GY  +   L +MYA  G  +    + +
Sbjct: 636 -------------NVDLGKIASEHLFEVEPEHVGYHVL---LSNMYASAGKWEGVDEIRS 679

Query: 396 LMQDKDV---ISWTSL---------ITGCAYHGSYEEALKYFS----DMRISGICPDHVV 439
           +   K +     W+S+          TG   H  YEE  +  +     +++ G  PDH  
Sbjct: 680 ITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALHEKLKMVGYVPDHRF 739

Query: 440 V 440
           V
Sbjct: 740 V 740



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 161/346 (46%), Gaps = 28/346 (8%)

Query: 333 KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM 392
           +IDD     V   F    +L +AK +H+ +V +       ++  L+++Y   GN+  A  
Sbjct: 53  EIDD-----VHTLFRYCTNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARY 107

Query: 393 VFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD-MRISGICPDHVVVSSILSACAELT 451
            F+ + ++DV +W  +I+G    G   E ++ FS  M  SG+ PD+    S+L AC  +T
Sbjct: 108 TFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVT 167

Query: 452 VLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIM 511
               G ++H + LK G    + V  SL+ +Y + G + +A  +FD M TRD+ +W A+I 
Sbjct: 168 D---GNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMIS 224

Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIK 571
           G  Q+G  KEAL   D + A     D +T V LL AC+ AG   N      S    +G++
Sbjct: 225 GYCQSGNAKEALTLSDGLRAM----DSVTVVSLLSACTEAG-DFNRGVTIHSYSIKHGLE 279

Query: 572 PGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANN 631
                   +IDL    G L + + + D+M    D   W +++ A       EL E+    
Sbjct: 280 SELFVSNKLIDLYAEFGSLKDCQKVFDRMYVR-DLISWNSIIKA------YELNEQPLRA 332

Query: 632 LFELEPM-------NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRG 670
           +   + M       + +  + L+++ S  G+      V+     +G
Sbjct: 333 ILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKG 378



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 9/225 (4%)

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
           T L+  + +HA  + S    ++ +   LV +Y   G +  A   FD +H RDV  W  +I
Sbjct: 65  TNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMI 124

Query: 511 MGCAQNGKGKEALQFYDQ-MLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG 569
            G  + G   E ++ +   ML+ G +PDY TF  +L AC +             +   +G
Sbjct: 125 SGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTDGNK----IHCLALKFG 180

Query: 570 IKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAA 629
                   A +I L  R G ++ A+ L D+M    D   W A++S     G+ +     +
Sbjct: 181 FMWDVYVAASLIHLYCRYGAVVNARILFDEMPTR-DMGSWNAMISGYCQSGNAKEALTLS 239

Query: 630 NNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
           +    L  M+++  V L +  + AG +     +       G+  E
Sbjct: 240 DG---LRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESE 281


>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
 gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 938

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 289/804 (35%), Positives = 435/804 (54%), Gaps = 42/804 (5%)

Query: 46  FSNSGEIDEAGQLFEKMS----DRDGFTWNTMIAAYANSG---RLREAKKLF-NETPFKN 97
             N   IDE       ++    D D  T   ++A     G    L  AK++F N   +  
Sbjct: 39  LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
            F ++SLI GY++ GL  EA  LF +M   G  P +YT    L  C+       G Q HG
Sbjct: 99  CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
             +K  +  + FV   LV  YA+C  +  A  +F    + +N V+WT+MI GY++  +  
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSE-RNVVSWTSMICGYARRDFAK 217

Query: 218 KAIECF-RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
            A++ F R +R E V  N  T   +++ACA +   + G +V+  I +SG E N  + SAL
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSAL 277

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           +DMY KC  +D A+RL +     N    N+M   + RQG  +EAL +F  M    ++ D 
Sbjct: 278 VDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDR 337

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK------------- 383
            +  S ++  +   ++   KS H  +++ GFE +  + NALIDMY K             
Sbjct: 338 ISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR 397

Query: 384 ------------------QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
                              G +D A+  F  M +K+++SW ++I+G      +EEA++ F
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457

Query: 426 SDMRIS-GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
             M+   G+  D V + SI SAC  L  L+  + ++    K+G    + +  +LV ++++
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSR 517

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG    A  +F+S+  RDV  WTA I   A  G  + A++ +D M+ +G KPD + FVG 
Sbjct: 518 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGA 577

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L ACSH GL +  +  F SM K++G+ P   HY CM+DLLGR+G L EA  L++ M  EP
Sbjct: 578 LTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEP 637

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
           +  +W +LL+ACRV G++E+   AA  +  L P     YV LSN+Y++AG+W D A+VR 
Sbjct: 638 NDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRL 697

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
            MK +G+RK PG S ++   + H F S D  HP   +I + +DE+       G+VPD++ 
Sbjct: 698 SMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSN 757

Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
            L +V+E+ K   L+ HSEKLA+A+GL++  +G  IRI KNLRVC DCH+  K+ S VY 
Sbjct: 758 VLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYN 817

Query: 785 RHIILRDSNRFHHFKAGNCSCGDY 808
           R IILRD+NRFH+ + G CSCGD+
Sbjct: 818 REIILRDNNRFHYIRQGKCSCGDF 841



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 142/540 (26%), Positives = 249/540 (46%), Gaps = 70/540 (12%)

Query: 16  RSKIIGPARYTHNVGNSVKPASDL--NRALVDF-SNSGEIDEAGQLFEKMSDRDGFTWNT 72
           +S+  G     H +   +  A DL    +LV F +  GE+D A ++F++MS+R+  +W +
Sbjct: 146 KSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTS 205

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           MI  YA     ++A  LF                              F  ++ E   P+
Sbjct: 206 MICGYARRDFAKDAVDLF------------------------------FRMVRDEEVTPN 235

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
             T+  V+  C+    L+ GE+ + +   +  ++N  +V+ LVDMY KC  I  A+ LF 
Sbjct: 236 SVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFD 295

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
            +    N      M + Y + G   +A+  F  M   GV  ++ +  S +++C+ +    
Sbjct: 296 EY-GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNIL 354

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL-------------------L 293
           +G   HG +L +GFE+   + +ALIDMY KC   D+A R+                   +
Sbjct: 355 WGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYV 414

Query: 294 EYSEID------------NEVSWNSMIVGFARQGFHKEALSLFKKMHARD-IKIDDFTYP 340
           E  E+D            N VSWN++I G  +    +EA+ +F  M +++ +  D  T  
Sbjct: 415 ENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMM 474

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
           S+ +       L+ AK ++  I K G +    +   L+DM+++ G+ + A  +FN + ++
Sbjct: 475 SIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR 534

Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
           DV +WT+ I   A  G+ E A++ F DM   G+ PD V     L+AC+   +++ G+++ 
Sbjct: 535 DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIF 594

Query: 461 AVFLKSGGCSSLSVD-NSLVLVYAKCGCINDANRVFDS--MHTRDVITWTALIMGCAQNG 517
              LK  G S   V    +V +  + G + +A ++ +   M   DVI W +L+  C   G
Sbjct: 595 YSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI-WNSLLAACRVQG 653


>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 274/755 (36%), Positives = 415/755 (54%), Gaps = 6/755 (0%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            QL       D  T   +     + G  R A+ LF   P  + F ++ LI G+S +  D 
Sbjct: 29  AQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFS-FSPDA 87

Query: 116 EAFELFWQM-QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
            +   +  + +     P  +T    +       L   G   H +A+   FD N FV + L
Sbjct: 88  SSISFYTHLLKNTTLSPDNFTYAFAISASPDDNL---GMCLHAHAVVDGFDSNLFVASAL 144

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           VD+Y K   +  A  +F   PD ++ V W TMITG  +N     +++ F+DM  +GV  +
Sbjct: 145 VDLYCKFSRVAYARKVFDKMPD-RDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLD 203

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
             T  ++L A A +     G  +    L  GF  + YV + LI +++KC D+D+AR L  
Sbjct: 204 STTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFG 263

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
                + VS+N++I GF+  G  + A+  F+++     ++   T   ++   +    L+ 
Sbjct: 264 MIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHL 323

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
           A  +    VK+G      V+ AL  +Y++   +D A  +F+   +K V +W ++I+G A 
Sbjct: 324 ACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQ 383

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
            G  E A+  F +M  +   P+ V ++SILSACA+L  L FG+ VH +        ++ V
Sbjct: 384 SGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYV 443

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
             +L+ +YAKCG I++A+++FD    ++ +TW  +I G   +G G EAL+ +++ML  G 
Sbjct: 444 STALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGF 503

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAK 594
           +P  +TF+ +L+ACSHAGL       F +M   Y I+P  +HYACM+D+LGR+G+L +A 
Sbjct: 504 QPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKAL 563

Query: 595 ALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAG 654
             + +M  EP   VW  LL AC +H D  L   A+  LFEL+P N   YV LSN+YS   
Sbjct: 564 EFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGNVGYYVLLSNIYSVER 623

Query: 655 KWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIK 714
            +  AA VR+ +K R + K PGC+ +E N   H+F+  DR H   T IY+K++E+   ++
Sbjct: 624 NFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSHSQTTSIYAKLEELTGKMR 683

Query: 715 EAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHT 774
           E GY  +   ALH+VEEE KE+    HSEKLA+AFGL+T   G  IRI KNLRVC DCH 
Sbjct: 684 EMGYQSETVTALHDVEEEEKELMFNVHSEKLAIAFGLITTEPGTEIRIIKNLRVCLDCHA 743

Query: 775 AMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           A K+IS +  R I++RD+NRFHHFK G CSCGDYW
Sbjct: 744 ATKFISKITERVIVVRDANRFHHFKDGICSCGDYW 778



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/449 (29%), Positives = 224/449 (49%), Gaps = 13/449 (2%)

Query: 25  YTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAA-----YAN 79
           YTH + N+     +   A    S S + D  G      +  DGF  N  +A+     Y  
Sbjct: 93  YTHLLKNTTLSPDNFTYAFA-ISASPD-DNLGMCLHAHAVVDGFDSNLFVASALVDLYCK 150

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
             R+  A+K+F++ P ++   W+++I G        ++ ++F  M  +G R    T+  V
Sbjct: 151 FSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATV 210

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF--PDG 197
           L   +    ++ G      A+K  F  + +V+TGL+ +++KC+ +  A  LF M   PD 
Sbjct: 211 LPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPD- 269

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
              V++  +I+G+S NG    A++ FR++ V G   +  T   ++   +          +
Sbjct: 270 --LVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCI 327

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
            G  + SG      V +AL  +Y++  ++D AR+L + S      +WN+MI G+A+ G  
Sbjct: 328 QGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLT 387

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
           + A+SLF++M   +   +  T  S+L+  A    L+  KSVH LI     E   +V+ AL
Sbjct: 388 EMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTAL 447

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           IDMYAK GN+  A  +F+L  +K+ ++W ++I G   HG  +EALK F++M   G  P  
Sbjct: 448 IDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSS 507

Query: 438 VVVSSILSACAELTVLEFGQQV-HAVFLK 465
           V   S+L AC+   ++  G ++ HA+  K
Sbjct: 508 VTFLSVLYACSHAGLVREGDEIFHAMVNK 536


>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 267/700 (38%), Positives = 407/700 (58%), Gaps = 7/700 (1%)

Query: 33  VKPASDLNRALVD--FSNSGEIDEAGQLFEKMSDRDGFTWNTMIA-AYANSGRLREAKKL 89
           ++P  DL R  VD  F    +      L  K S+         +A AY+    +  A +L
Sbjct: 68  IQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRL 127

Query: 90  FNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLL 149
           F++   +N F+W+ LI G +  GL ++ FE F +MQ +G  P Q+    +L++C     +
Sbjct: 128 FDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSI 187

Query: 150 QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
           + G   H   +   F  + FV T L++MYAK + I ++  +F    +  N V+W  MITG
Sbjct: 188 ELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTE-VNVVSWNAMITG 246

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
           ++ N     A + F  M  EGV  +  TF  +  A   +   +   +V G  L  G ++N
Sbjct: 247 FTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSN 306

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS--WNSMIVGFARQGFHKEALSLFKKM 327
             V +ALIDM +KCG L  AR +     I    +  WN+MI G+ R GF+++AL LF KM
Sbjct: 307 TLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKM 366

Query: 328 HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE-GYKFVNNALIDMYAKQGN 386
              DI +D +TY SV N  A+   L+  K VH+  +K+G E  Y  ++NA+ + YAK G+
Sbjct: 367 CQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGS 426

Query: 387 LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSA 446
           L+    VFN M+D+D+ISWTSL+T  +    +++A++ FS+MR  GI P+    SS+L +
Sbjct: 427 LEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVS 486

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITW 506
           CA L +LE+GQQVH +  K G      ++++LV +YAKCGC+ DA +VF+ +   D ++W
Sbjct: 487 CANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSW 546

Query: 507 TALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDK 566
           TA+I G AQ+G   +ALQ + +M+  G +P+ +TF+ +LFACSH GL E    YF+ M K
Sbjct: 547 TAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKK 606

Query: 567 VYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGE 626
            YG+ P  +HYAC++DLL R G L +A   + +M  EP+  VW+ LL ACRVHG++ELGE
Sbjct: 607 TYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGE 666

Query: 627 RAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQV 686
            AA  +   +  N+  YV LSN Y  +G ++D   +R LMK +G++KEPGCSW+  N  +
Sbjct: 667 LAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKEPGCSWISVNGTL 726

Query: 687 HIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFAL 726
           H F + D+ HP +  IY+K++E+ L +     VPD+++ L
Sbjct: 727 HKFYAGDQQHPEKDKIYAKLEELKLKLISLDDVPDLSYEL 766


>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 273/764 (35%), Positives = 412/764 (53%), Gaps = 86/764 (11%)

Query: 47  SNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIY 106
           SNS  +DEA  L              +++ YA  G L+E +++F+    KN + W+ ++ 
Sbjct: 127 SNSVGVDEALGL-------------KLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVS 173

Query: 107 GYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDL 166
            Y+  G                        D    +C  K ++++G    G   ++ F+L
Sbjct: 174 EYAKIG------------------------DFKESICLFKIMVEKG--IEGKRPESAFEL 207

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
                                   F    D ++ ++W +MI+GY  NG   + +  ++ M
Sbjct: 208 ------------------------FDKLCD-RDVISWNSMISGYVSNGLTERGLGIYKQM 242

Query: 227 RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDL 286
              G++ +  T  S+L  CA       G  VH   + S FE  +   + L+DMY+KCGDL
Sbjct: 243 MYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDL 302

Query: 287 DSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCF 346
           D A R+ E     N VSW SMI G+ R G    A+ L ++M    +K+D     S+L+  
Sbjct: 303 DGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHAC 362

Query: 347 ASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWT 406
           A +  L+N K VH  I     E   FV NAL+DMYAK G+++ A  VF+ M  KD+ISW 
Sbjct: 363 ARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWN 422

Query: 407 SLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
           ++I                       + PD   ++ +L ACA L+ LE G+++H   L++
Sbjct: 423 TMI---------------------GELKPDSRTMACVLPACASLSALERGKEIHGYILRN 461

Query: 467 GGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFY 526
           G  S   V N+LV +Y KCG +  A  +FD + ++D+++WT +I G   +G G EA+  +
Sbjct: 462 GYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATF 521

Query: 527 DQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGR 586
           ++M   G +PD ++F+ +L+ACSH+GL E    +F  M   + I+P  +HYACM+DLL R
Sbjct: 522 NEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSR 581

Query: 587 SGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQL 646
           +G L +A   ++ +   PDAT+W ALL  CR + D+EL E+ A  +FELEP N+  YV L
Sbjct: 582 TGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLL 641

Query: 647 SNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFIS-EDRGHPLRTDIYSK 705
           +N+Y+ A KWE+  R+R+ +  +G+RK PGCSW+E   +V++F+S  +  HP   +I S 
Sbjct: 642 ANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESL 701

Query: 706 IDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKN 765
           + ++   +KE G+ P   +AL N +E  KE+ L  HSEKLA+AFGLLTLP    IR+ KN
Sbjct: 702 LKKMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKN 761

Query: 766 LRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           LRVCGDCH   K++S    R I+LRD NRFHHFK G CSC  +W
Sbjct: 762 LRVCGDCHEMAKFMSKETRREIVLRDPNRFHHFKDGYCSCRGFW 805



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 157/506 (31%), Positives = 251/506 (49%), Gaps = 45/506 (8%)

Query: 31  NSVKPASDLNRALVDF-SNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKL 89
           NSV     L   LV F +  G++ E  ++F+ M  ++ + WN M++ YA  G  +E+  L
Sbjct: 128 NSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICL 187

Query: 90  FN------------ETPFKNF--------FTWSSLIYGYSNYGLDIEAFELFWQMQLEGY 129
           F             E+ F+ F         +W+S+I GY + GL      ++ QM   G 
Sbjct: 188 FKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGI 247

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
                T+ +VL  C+  G L  G+  H  AIK+ F+        L+DMY+KC  +  A  
Sbjct: 248 DVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALR 307

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +F+   + +N V+WT+MI GY+++G    AI+  + M  EGV+ +     SIL ACA   
Sbjct: 308 VFEKMGE-RNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSG 366

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
           + D G  VH  I ++  E+N++V +AL+DMYAKCG +++A  +     + + +SWN+MI 
Sbjct: 367 SLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI- 425

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
                                ++K D  T   VL   AS   L   K +H  I++ G+  
Sbjct: 426 --------------------GELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSS 465

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
            + V NAL+D+Y K G L  A ++F+++  KD++SWT +I G   HG   EA+  F++MR
Sbjct: 466 DRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMR 525

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAKCGCI 488
            +GI PD V   SIL AC+   +LE G +   +          L     +V + ++ G +
Sbjct: 526 DAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNL 585

Query: 489 NDANRVFDSMH-TRDVITWTALIMGC 513
           + A    +++    D   W AL+ GC
Sbjct: 586 SKAYEFIETLPIAPDATIWGALLCGC 611



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 145/477 (30%), Positives = 210/477 (44%), Gaps = 86/477 (18%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL--- 293
           T+ S+L  CA + +   G +VH  I S+    +  +   L+  YA CGDL   RR+    
Sbjct: 101 TYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTM 160

Query: 294 -------------EYSEI----------------------------------DNEV-SWN 305
                        EY++I                                  D +V SWN
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWN 220

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           SMI G+   G  +  L ++K+M    I +D  T  SVL   A++  L+  K+VHSL +K+
Sbjct: 221 SMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
            FE     +N L+DMY+K G+LD A  VF  M +++V+SWTS+I G    G  + A+K  
Sbjct: 281 SFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLL 340

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             M   G+  D V ++SIL ACA    L+ G+ VH     +   S+L V N+L+ +YAKC
Sbjct: 341 QQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKC 400

Query: 486 GCINDANRVFDSMHTRDVITWTALI--------------MGCAQNGKGKEALQFYDQMLA 531
           G +  AN VF +M  +D+I+W  +I                CA     +   + +  +L 
Sbjct: 401 GSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGYILR 460

Query: 532 RGTKPDYIT---FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD--HYACMIDLLGR 586
            G   D       V L   C   GL   AR  F+ +       P  D   +  MI   G 
Sbjct: 461 NGYSSDRHVANALVDLYVKCGVLGL---ARLLFDMI-------PSKDLVSWTVMIAGYGM 510

Query: 587 SGKLIEAKALLDQMVG---EPDATVWKALLSACRVHGDLELGER---AANNLFELEP 637
            G   EA A  ++M     EPD   + ++L AC   G LE G R      N F +EP
Sbjct: 511 HGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEP 567



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 189/400 (47%), Gaps = 52/400 (13%)

Query: 42  ALVDFSNSGEIDEAGQLFEKMSDRDGFTW-----NTMIAAYANSGRLREAKKLFNETPFK 96
            LV  +NSG +   G+    ++ +  F       NT++  Y+  G L  A ++F +   +
Sbjct: 257 VLVGCANSGTLS-LGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGER 315

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
           N  +W+S+I GY+  G    A +L  QM+ EG +     + ++L  C+  G L  G+  H
Sbjct: 316 NVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVH 375

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
            Y      + N FV   L+DMYAKC  +  A  +F      K+ ++W TMI         
Sbjct: 376 DYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMV-VKDIISWNTMIG-------- 426

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
               E   D R         T   +L ACA++SA + G ++HG IL +G+ ++ +V +AL
Sbjct: 427 ----ELKPDSR---------TMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANAL 473

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           +D+Y KCG L  AR L +     + VSW  MI G+   G+  EA++ F +M    I+ D+
Sbjct: 474 VDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDE 533

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN------------ALIDMYAKQ 384
            ++ S+L  +A +         HS +++ G+  +  + N             ++D+ ++ 
Sbjct: 534 VSFISIL--YACS---------HSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRT 582

Query: 385 GNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           GNL  A+  +  L    D   W +L+ GC  +   E A K
Sbjct: 583 GNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEK 622



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 177/396 (44%), Gaps = 72/396 (18%)

Query: 298 IDNEVS-WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
           ID++V+ +N+ I+ F + G  + A+ L      +  +++  TY SVL   A      + K
Sbjct: 62  IDHQVTDYNAKILHFCQLGDLENAMELI--CMCKKSELETKTYSSVLQLCAGLKSFTDGK 119

Query: 357 SVHSLIVKTGFE-----GYKFVN--------------------------NALIDMYAKQG 385
            VHS+I           G K V+                          N ++  YAK G
Sbjct: 120 KVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG 179

Query: 386 NL--------------------DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           +                     + AF +F+ + D+DVISW S+I+G   +G  E  L  +
Sbjct: 180 DFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIY 239

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             M   GI  D   + S+L  CA    L  G+ VH++ +KS     ++  N+L+ +Y+KC
Sbjct: 240 KQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKC 299

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G ++ A RVF+ M  R+V++WT++I G  ++G+   A++   QM   G K D +    +L
Sbjct: 300 GDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSIL 359

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYAC--MIDLLGRSGKLIEAKALL------ 597
            AC+ +G  +N +   +  D +       + + C  ++D+  + G +  A ++       
Sbjct: 360 HACARSGSLDNGK---DVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVK 416

Query: 598 -----DQMVGE--PDATVWKALLSACRVHGDLELGE 626
                + M+GE  PD+     +L AC     LE G+
Sbjct: 417 DIISWNTMIGELKPDSRTMACVLPACASLSALERGK 452


>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 276/768 (35%), Positives = 415/768 (54%), Gaps = 114/768 (14%)

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG------------------ 197
           H + + + F  N F++  L+++Y K   I  A  LF   P                    
Sbjct: 28  HAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSSSGNV 87

Query: 198 --------------KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
                         ++ V++  MIT YS    G  A+  F  M+  G   + FTF S+L+
Sbjct: 88  KLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLS 147

Query: 244 ACAAVSARDFGAQVHGC-ILSSGFEANVYVQSALIDMYAKCG------------------ 284
           A + ++  +   Q+  C ++  G      V +AL+  Y  C                   
Sbjct: 148 ALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKVF 207

Query: 285 ------------------------DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEA 320
                                   DL +AR LL+      +V+WN+MI G+ R+G ++EA
Sbjct: 208 DETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEA 267

Query: 321 LSLFKKMHARDIKIDDFTYPSVLN-CFASNIDL---NNAKSVHSLIVKTGFE-GYKFV-- 373
              F++MH+  I+ D++TY S+++ C + N  +   N  + VH  I++T  E  + FV  
Sbjct: 268 FDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLS 327

Query: 374 -NNALIDMYAKQGNLDCAFMVFNLMQDKDVISW--------------------------- 405
            NNALI  Y K   +  A  VF+ M  +D+ISW                           
Sbjct: 328 VNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERN 387

Query: 406 ----TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
               T +I+G A +G  EE LK F+ M+  G+ P     +  ++AC+ L  L+ GQQ+H+
Sbjct: 388 VLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHS 447

Query: 462 VFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKE 521
             ++ G  S LS  N+L+ +Y++CG +  A  VF +M   D ++W A+I   AQ+G G +
Sbjct: 448 QVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVK 507

Query: 522 ALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMI 581
           A++ ++QM+     PD ITF+ +L AC+HAGL +  R YF++M   YGI PG DHYA +I
Sbjct: 508 AIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLI 567

Query: 582 DLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAM 641
           DLL R+G  ++A++++  M  E  A +W+ALL+ CR+HG++ELG +AA+ L EL P    
Sbjct: 568 DLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDG 627

Query: 642 PYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTD 701
            Y+ LSNMY+  G+W++ ARVR LM+ RG++KEPGCSWVE  + VH+F+ +D  HP    
Sbjct: 628 TYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQA 687

Query: 702 IYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIR 761
           +Y+ + +++  +K+ GYVPD  F LH++E E KE  L+ HSEKLAV +G++ LP GA IR
Sbjct: 688 VYTYLQQLVNEMKKLGYVPDTKFVLHDMESEHKEHSLSTHSEKLAVVYGIMKLPLGATIR 747

Query: 762 IFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +FKNLR+CGDCH A KYIS V  R I++RD  RFHHFK G CSCG+YW
Sbjct: 748 VFKNLRICGDCHNAFKYISKVVEREIVVRDRKRFHHFKNGECSCGNYW 795



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 156/601 (25%), Positives = 268/601 (44%), Gaps = 88/601 (14%)

Query: 17  SKIIGPARYTHNVGNSVKPAS-DLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIA 75
           ++II  A + H + +  KP +  LNR +  +  S  I  A +LF+K+   D     T+++
Sbjct: 20  TQIIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLS 79

Query: 76  AYANSGRLREAKKLFNETPF--KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQ 133
           AY++SG ++ A++LFN TP   ++  +++++I  YS+      A  LF QM+  G+ P  
Sbjct: 80  AYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDP 139

Query: 134 YTLDNVLRLCSLKGLLQRG-EQFHGYAIKTCFDLNAFVVTGLVDMYAKC---------KC 183
           +T  +VL   SL    +R  +  H   IK    L   V   L+  Y  C         + 
Sbjct: 140 FTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQL 199

Query: 184 IFEAEYLFKMFP-----------------------------DGKNH---VAWTTMITGYS 211
           +  A  +F   P                             DG  +   VAW  MI+GY 
Sbjct: 200 MASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYV 259

Query: 212 QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR----DFGAQVHGCILSSGFE 267
           + G   +A + FR M   G++ +++T+ S+++AC + + +    + G QVHG IL +  E
Sbjct: 260 RRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVE 319

Query: 268 AN----VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS----------------- 306
            +    + V +ALI  Y K   +  ARR+ +   + + +SWN+                 
Sbjct: 320 PSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSI 379

Query: 307 --------------MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
                         MI G A+ GF +E L LF +M +  ++  D+ +   +   +    L
Sbjct: 380 FSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSL 439

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
           +N + +HS +++ G +      NALI MY++ G ++ A  VF  M   D +SW ++I   
Sbjct: 440 DNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAAL 499

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
           A HG   +A++ F  M    I PD +   +IL+AC    +++ G+          G +  
Sbjct: 500 AQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITP- 558

Query: 473 SVDN--SLVLVYAKCGCINDANRVFDSM-HTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
             D+   L+ +  + G    A  V  SM        W AL+ GC  +G  +  +Q  D++
Sbjct: 559 GEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRL 618

Query: 530 L 530
           L
Sbjct: 619 L 619



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 209/458 (45%), Gaps = 56/458 (12%)

Query: 69  TWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG 128
           +W TMIA Y  +  L  A++L +   +     W+++I GY   GL  EAF+ F +M   G
Sbjct: 219 SWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMG 278

Query: 129 YRPSQYTLDNVLRLC----SLKGLLQRGEQFHGYAIKTCFDL-NAFVVT---GLVDMYAK 180
            +  +YT  +++  C       G+   G Q HGY ++T  +  + FV++    L+  Y K
Sbjct: 279 IQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTK 338

Query: 181 CKCIFEAEYLFKMFP------------------------------DGKNHVAWTTMITGY 210
              + EA  +F   P                                +N + WT MI+G 
Sbjct: 339 YDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGL 398

Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV 270
           +QNG+G + ++ F  M+ EG+E   + F   +TAC+ + + D G Q+H  ++  G ++ +
Sbjct: 399 AQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGL 458

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
              +ALI MY++CG ++SA  +       + VSWN+MI   A+ G   +A+ LF++M   
Sbjct: 459 SAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKE 518

Query: 331 DIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDC 389
           DI  D  T+ ++L  C  + +         ++  + G    +     LID+  + G    
Sbjct: 519 DILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLK 578

Query: 390 AFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALKYFSDM--RISGICPDHVVVSSILSA 446
           A  V   M  +     W +L+ GC  HG+ E  ++    +   I G    ++++S++ +A
Sbjct: 579 AQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDGTYIILSNMYAA 638

Query: 447 CAE--------LTVLEFGQQVHAVFLKSGGCSSLSVDN 476
             +        L + E G +      K  GCS + V+N
Sbjct: 639 LGQWDEVARVRLLMRERGVK------KEPGCSWVEVEN 670



 Score = 47.4 bits (111), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 3/130 (2%)

Query: 455 FGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCA 514
             + VHA  L SG   +  + N L+ +Y K   I  A ++FD +   D++  T L+   +
Sbjct: 23  IARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYS 82

Query: 515 QNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
            +G  K A Q ++      T  D +++  ++ A SH      A   F  M K YG  P P
Sbjct: 83  SSGNVKLAQQLFNATPL--TIRDTVSYNAMITAYSHGNDGHAALNLFVQM-KRYGFLPDP 139

Query: 575 DHYACMIDLL 584
             ++ ++  L
Sbjct: 140 FTFSSVLSAL 149


>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Vitis vinifera]
          Length = 684

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 259/661 (39%), Positives = 398/661 (60%), Gaps = 4/661 (0%)

Query: 152 GEQFHGYAIKTCFD-LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
           G   H   IKT  + L +F+   LV+MY+K      A+ L  + P+ ++ V WT +I G 
Sbjct: 25  GRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPN-RSVVTWTALIAGS 83

Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV 270
            QNG    A+  F +MR + ++ N FTFP    A  ++ +   G QVH   + +G  ++V
Sbjct: 84  VQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDV 143

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
           +V  +  DMY+K G  + AR++ +     N  +WN+ +     +G + +AL+ F +    
Sbjct: 144 FVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHE 203

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
             + +  T+ + LN  A    L   + +H  ++++GFE    V N LID Y K   + C+
Sbjct: 204 GWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCS 263

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
            ++F+ +   + +SW S+I     +   E+A   F   R  GI P   +VSS+LSACA L
Sbjct: 264 EIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGL 323

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
           +VLE G+ VH + +K+    ++ V ++LV +Y KCG I DA R FD M  R+++TW A+I
Sbjct: 324 SVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMI 383

Query: 511 MGCAQNGKGKEALQFYDQML--ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
            G A  G+   A+  +D+M   +    P+Y+TFV +L ACS AG        FESM   Y
Sbjct: 384 GGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRY 443

Query: 569 GIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
           GI+PG +HYAC++DLLGR+G + +A   + +M   P  +VW ALL A ++ G  ELG+ A
Sbjct: 444 GIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVA 503

Query: 629 ANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHI 688
           A+NLFEL+P+++  +V LSNM++ AG+WE+A  VRK MK  GI+K  GCSW+   + VH+
Sbjct: 504 ADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHV 563

Query: 689 FISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVA 748
           F ++D  H   ++I + + ++   ++ AGY+PD +FAL ++EEE K + + YHSEK+A+A
Sbjct: 564 FQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALA 623

Query: 749 FGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDY 808
           FGL+++P G PIRI KNLR+CGDCH+A+K+IS +  R II+RD+N FH F+   CSC DY
Sbjct: 624 FGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDY 683

Query: 809 W 809
           W
Sbjct: 684 W 684



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 136/482 (28%), Positives = 227/482 (47%), Gaps = 27/482 (5%)

Query: 16  RSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIA 75
           R   I P  +T     + K +  L   LV         +AGQ+       D F   +   
Sbjct: 100 RRDSIQPNDFTFPC--AFKASGSLRSPLVGKQVHALAVKAGQI------SDVFVGCSAFD 151

Query: 76  AYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYT 135
            Y+ +G   EA+K+F+E P +N  TW++ +      G   +A   F + + EG+ P+  T
Sbjct: 152 MYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLIT 211

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
               L  C+    L+ G Q HG+ +++ F+ +  V  GL+D Y KC  +  +E +F    
Sbjct: 212 FCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGIS 271

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGA 255
              N V+W +MI  Y QN    KA   F   R EG+E   F   S+L+ACA +S  + G 
Sbjct: 272 K-PNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGK 330

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
            VH   + +    N++V SAL+DMY KCG ++ A R  +     N V+WN+MI G+A QG
Sbjct: 331 SVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQG 390

Query: 316 FHKEALSLFKKMH--ARDIKIDDFTYPSVLNCFASNIDLNNAKSV-HSLIVKTGFEGYKF 372
               A++LF +M   +  +  +  T+  VL+  +    +N    +  S+  + G E    
Sbjct: 391 QADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAE 450

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYE----EALKYFS- 426
               ++D+  + G ++ A+     M  +  +S W +L+      G  E     A   F  
Sbjct: 451 HYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFEL 510

Query: 427 DMRISGICPDHVVVSSILSACA---ELTVLEFGQQVHAVFLKSG-GCSSLSVDNSLVLVY 482
           D   SG   +HV++S++ +A     E T++   +++  V +K G GCS ++  N++ +  
Sbjct: 511 DPLDSG---NHVLLSNMFAAAGRWEEATLVR--KEMKDVGIKKGAGCSWITAGNAVHVFQ 565

Query: 483 AK 484
           AK
Sbjct: 566 AK 567


>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 278/753 (36%), Positives = 439/753 (58%), Gaps = 10/753 (1%)

Query: 65   RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
            RD +  + ++  +A  G +  AK +F +   +N  T + L+ G +      EA ++F +M
Sbjct: 384  RDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM 443

Query: 125  Q--LEGYRPSQYTL-DNVLRLCSLKGLLQRGEQFHGYAIKT-CFDLNAFVVTGLVDMYAK 180
            +  +E    S   L        +LK   ++G++ H Y  ++   D    +   LV+MY K
Sbjct: 444  KDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGK 503

Query: 181  CKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
            C  I  A  +F++ P  K+ V+W +MI+G   N    +A+ CF  M+  G+  + F+  S
Sbjct: 504  CTAIDNACSVFQLMPS-KDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVIS 562

Query: 241  ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
             L++C+++     G Q+HG     G + +V V +AL+ +YA+   ++  +++       +
Sbjct: 563  TLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYD 622

Query: 301  EVSWNSMIVGFAR-QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
            +VSWNS I   A+ +    +AL  F +M     + +  T+ ++L   +S   L     +H
Sbjct: 623  QVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIH 682

Query: 360  SLIVKTGFEGYKFVNNALIDMYAKQGNL-DCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
            +LI+K        + NAL+  Y K   + DC  +   + + +D +SW S+I+G  + G  
Sbjct: 683  ALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGIL 742

Query: 419  EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSL 478
             +A+     M   G   D    +++LSACA +  LE G +VHA  +++   S + V ++L
Sbjct: 743  HKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSAL 802

Query: 479  VLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDY 538
            V +YAKCG I+ A+R F+ M  R++ +W ++I G A++G G++AL+ + +M   G  PD+
Sbjct: 803  VDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDH 862

Query: 539  ITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLD 598
            +TFVG+L ACSH GL +    +F+SM +VYG+ P  +H++CM+DLLGR+G + + +  + 
Sbjct: 863  VTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIK 922

Query: 599  QMVGEPDATVWKALLSA-CRVHG-DLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
             M  +P+  +W+ +L A CR +G + ELG+RAA  L ELEP NA+ YV LSNM++  G W
Sbjct: 923  TMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNW 982

Query: 657  EDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA 716
            ED    R  M+   ++K+ GCSWV     VH+F++ D+ HP +  IY K+ E+M  I++A
Sbjct: 983  EDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKELMNKIRDA 1042

Query: 717  GYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAM 776
            GYVP+  +AL+++E E KE  L+YHSEKLA+AF +LT     PIRI KNLRVCGDCHTA 
Sbjct: 1043 GYVPETKYALYDLELENKEELLSYHSEKLAIAF-VLTRKSELPIRIMKNLRVCGDCHTAF 1101

Query: 777  KYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            KYIS +  R IILRDSNRFHHF  G CSCGDYW
Sbjct: 1102 KYISKIVGRQIILRDSNRFHHFGGGMCSCGDYW 1134



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 215/718 (29%), Positives = 343/718 (47%), Gaps = 74/718 (10%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
           QL++     D F  NT+I  Y   G L  A+KLF+E P KN  +WS LI GY+   +  E
Sbjct: 165 QLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDE 224

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL--LQRGEQFHGYAIKTCFDLNAFVVTGL 174
           A  LF  +   G  P+ + + + LR C   G   ++ G Q H +  K     +  +   L
Sbjct: 225 ACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVL 284

Query: 175 VDMYAKCK-CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE- 232
           + MY+ C   I +A  +F      +N V W ++I+ Y + G    A + F  M++EGVE 
Sbjct: 285 MSMYSDCSGSIDDAHRVFDEIK-FRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVEL 343

Query: 233 ---SNQFTFPSILTACAAVSARDFG----AQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
               N++T  S++T  AA S  D G     Q+   I  SGF  ++YV SAL++ +A+ G 
Sbjct: 344 NLRPNEYTLCSLVT--AACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGL 401

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD-IKIDDFTYPSVLN 344
           +D A+ + +     N V+ N ++VG ARQ   +EA  +FK+M  +D ++I+  +   +L+
Sbjct: 402 MDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM--KDLVEINSESLVVLLS 459

Query: 345 CFASNIDLNNAK----SVHSLIVKTGFEGYKF-VNNALIDMYAKQGNLDCAFMVFNLMQD 399
            F    +L   K     VH+ + ++G    +  + NAL++MY K   +D A  VF LM  
Sbjct: 460 TFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPS 519

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           KD +SW S+I+G  ++  +EEA+  F  M+ +G+ P +  V S LS+C+ L  L  G+Q+
Sbjct: 520 KDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQI 579

Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ-NGK 518
           H    K G    +SV N+L+ +YA+   IN+  +VF  M   D ++W + I   A+    
Sbjct: 580 HGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEAS 639

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACS-----------HAGL----------AENA 557
             +AL+++ +M+  G +P+ +TF+ +L A S           HA +           ENA
Sbjct: 640 VLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENA 699

Query: 558 RWYF----ESMDKVYGI------KPGPDHYACMIDLLGRSGKLIEAKALLDQMV---GEP 604
              F    E M+    I      +     +  MI     SG L +A  L+  M+    + 
Sbjct: 700 LLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKL 759

Query: 605 DATVWKALLSACRVHGDLELG-ERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
           D   +  +LSAC     LE G E  A  +      + +    L +MY+  GK + A+R  
Sbjct: 760 DGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFF 819

Query: 664 KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPD 721
           +LM  R I      SW   NS +  +     G         K  +I   +K+ G  PD
Sbjct: 820 ELMPVRNIY-----SW---NSMISGYARHGHGQ--------KALKIFTRMKQHGQSPD 861



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 152/318 (47%), Gaps = 18/318 (5%)

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
           + ++  L +A  +H  + KTGF    F  N LI++Y + GNL  A  +F+ M  K+++SW
Sbjct: 150 YKTSSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSW 209

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL--TVLEFGQQVHAVF 463
           + LI+G   +   +EA   F  +  SG+ P+H  V S L AC +   T ++ G Q+HA  
Sbjct: 210 SCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFI 269

Query: 464 LKSGGCSSLSVDNSLVLVYAKC-GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEA 522
            K    S + + N L+ +Y+ C G I+DA+RVFD +  R+ +TW ++I    + G    A
Sbjct: 270 CKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSA 329

Query: 523 LQFYDQMLARGT----KPDYITFVGLLF-ACSHAGLAENARWYFESM-DKVYGIKPGPDH 576
            + +  M   G     +P+  T   L+  ACS   LA+      E M  ++       D 
Sbjct: 330 FKLFSVMQMEGVELNLRPNEYTLCSLVTAACS---LADCGLVLLEQMLTRIEKSGFLRDL 386

Query: 577 Y--ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFE 634
           Y  + +++   R G +  AK +  QM      T+   ++   R H     GE AA    E
Sbjct: 387 YVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQ----GEEAAKVFKE 442

Query: 635 LEPMNAMPYVQLSNMYST 652
           ++ +  +    L  + ST
Sbjct: 443 MKDLVEINSESLVVLLST 460



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 147/285 (51%), Gaps = 13/285 (4%)

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
            +H  +  +GF  +V+  + LI++Y + G+L SAR+L +     N VSW+ +I G+ +  
Sbjct: 161 HLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNR 220

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVL----NCFASNIDLNNAKSVHSLIVKTGFEGYK 371
              EA SLFK + +  +  + F   S L     C ++ I L     +H+ I K       
Sbjct: 221 MPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKL--GMQIHAFICKLPCVSDM 278

Query: 372 FVNNALIDMYAK-QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
            ++N L+ MY+   G++D A  VF+ ++ ++ ++W S+I+     G    A K FS M++
Sbjct: 279 ILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQM 338

Query: 431 SGI----CPDHVVVSSILSACAELT--VLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
            G+     P+   + S+++A   L    L   +Q+     KSG    L V ++LV  +A+
Sbjct: 339 EGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFAR 398

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
            G ++ A  +F  M+ R+ +T   L++G A+  +G+EA + + +M
Sbjct: 399 YGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM 443



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 72/146 (49%), Gaps = 3/146 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           + D    + ++  YA  G++  A + F   P +N ++W+S+I GY+ +G   +A ++F +
Sbjct: 793 ESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTR 852

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV--VTGLVDMYAKC 181
           M+  G  P   T   VL  CS  GL+  G + H  ++   + L+  +   + +VD+  + 
Sbjct: 853 MKQHGQSPDHVTFVGVLSACSHVGLVDEGYK-HFKSMGEVYGLSPRIEHFSCMVDLLGRA 911

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMI 207
             + + E   K  P   N + W T++
Sbjct: 912 GDVKKIEDFIKTMPMDPNILIWRTVL 937


>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 270/737 (36%), Positives = 421/737 (57%), Gaps = 4/737 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +++ +   G L EA  +F +   ++ F+W+ L+ GY+  G   EA  L+ +M   G R
Sbjct: 133 NALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIR 192

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  YT   VLR C     L RG + H + I+  F+ +  VV  L+ MY KC  IF A  +
Sbjct: 193 PDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLV 252

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P  ++ ++W  MI+GY +N    + +  F  MR   V+ +  T  S+++AC A+  
Sbjct: 253 FDRMPR-RDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGD 311

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              G +VHG ++ +GF A V V ++LI M++  G  D A  +    E  + VSW +MI G
Sbjct: 312 ERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISG 371

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           + + G  ++A+  +  M    +  D+ T  SVL+  A    L+    +H    +TG   Y
Sbjct: 372 YEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSY 431

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
             V N+LIDMY+K   +D A  VF+ + +K+VISWTS+I G   +    EAL +F  M +
Sbjct: 432 VIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMIL 491

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
           S + P+ V + S+LSACA +  L  G+++HA  L++G      + N+L+ +Y +CG +  
Sbjct: 492 S-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEP 550

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           A   F+S   +DV +W  L+ G AQ GKG  A++ + +M+     PD ITF  LL ACS 
Sbjct: 551 AWNQFNSCE-KDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSR 609

Query: 551 AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
           +G+  +   YFESM+  + I P   HYA ++DLLGR+G+L +A   + +M  +PD  +W 
Sbjct: 610 SGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWG 669

Query: 611 ALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRG 670
           ALL+ACR++ ++ELGE AA ++FE++  +   Y+ L N+Y+ +GKW++ ARVRK+M+   
Sbjct: 670 ALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENR 729

Query: 671 IRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVE 730
           +  +PGCSWVE   QVH F++ D  HP   +I + ++     ++  G     +    +++
Sbjct: 730 LTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMSKDSRRDDID 789

Query: 731 EEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILR 790
               EI    HSE+LA+AFGL+    G PI + KNL +C +CH  +K+IS V  R I +R
Sbjct: 790 ASKAEI-FCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRGISVR 848

Query: 791 DSNRFHHFKAGNCSCGD 807
           D+ +FHHFK G CSCGD
Sbjct: 849 DTEQFHHFKDGVCSCGD 865



 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 173/563 (30%), Positives = 285/563 (50%), Gaps = 38/563 (6%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           +LRLC  K     G + H Y  KT   L   +   L+ M+ +   + EA Y+F    + +
Sbjct: 100 LLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAE-R 158

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           +  +W  ++ GY++ GY  +A+  +  M   G+  + +TFP +L  C  +     G +VH
Sbjct: 159 DLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVH 218

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
             ++  GFE++V V +ALI MY KCGD+ SAR + +     + +SWN+MI G+       
Sbjct: 219 LHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCL 278

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           E L LF  M    +  D  T  SV++   +  D    + VH  ++KTGF     VNN+LI
Sbjct: 279 EGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLI 338

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
            M++  G  D A MVF+ M+ KD++SWT++I+G   +G  E+A++ ++ M   G+ PD +
Sbjct: 339 QMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEI 398

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
            ++S+LSACA L +L+ G  +H    ++G  S + V NSL+ +Y+KC CI+ A  VF  +
Sbjct: 399 TIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRI 458

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG-LAENA 557
             ++VI+WT++I+G   N +  EAL F+ QM+    KP+ +T V +L AC+  G L+   
Sbjct: 459 PNKNVISWTSIILGLRLNYRSFEALFFFQQMIL-SLKPNSVTLVSVLSACARIGALSCGK 517

Query: 558 RWYFESMDKVYG------------------IKPGPDHY-ACMIDL---------LGRSGK 589
             +  ++    G                  ++P  + + +C  D+           + GK
Sbjct: 518 EIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCEKDVASWNILLTGYAQQGK 577

Query: 590 LIEAKALLDQMVGE---PDATVWKALLSACRVHGDLELGE---RAANNLFELEPMNAMPY 643
              A  L  +M+     PD   + +LL AC   G +  G     +  + F + P N   Y
Sbjct: 578 GGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAP-NLKHY 636

Query: 644 VQLSNMYSTAGKWEDAARVRKLM 666
             + ++   AG+ EDA    K M
Sbjct: 637 ASVVDLLGRAGRLEDAYEFIKKM 659



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 113/349 (32%), Positives = 188/349 (53%)

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           KA+     M+   V   + T+ ++L  C    A   G++VH  +  +     V + +AL+
Sbjct: 77  KALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALL 136

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
            M+ + GDL  A  +       +  SWN ++ G+A+ G+  EAL+L+ +M    I+ D +
Sbjct: 137 SMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVY 196

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           T+P VL       DL   + VH  +++ GFE    V NALI MY K G++  A +VF+ M
Sbjct: 197 TFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRM 256

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
             +D ISW ++I+G   +    E L+ F  MR   + PD + ++S++SAC  L     G+
Sbjct: 257 PRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGR 316

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
           +VH   +K+G  + +SV+NSL+ +++  GC ++A  VF  M  +D+++WTA+I G  +NG
Sbjct: 317 EVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNG 376

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDK 566
             ++A++ Y  M   G  PD IT   +L AC+  GL +      E  D+
Sbjct: 377 LPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADR 425



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/351 (23%), Positives = 137/351 (39%), Gaps = 54/351 (15%)

Query: 407 SLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
           SLI      G  E+AL +   M+   +  +     ++L  C        G +VH+   K+
Sbjct: 64  SLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKT 123

Query: 467 GGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFY 526
                + + N+L+ ++ + G + +A  VF  M  RD+ +W  L+ G A+ G   EAL  Y
Sbjct: 124 VTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLY 183

Query: 527 DQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKV-YGIKPGPDHYACMIDLLG 585
            +ML  G +PD  TF  +L  C   GL + AR     +  + YG +   D    +I +  
Sbjct: 184 HRMLWVGIRPDVYTFPCVLRTC--GGLPDLARGREVHLHVIRYGFESDVDVVNALITMYV 241

Query: 586 RSGKLIEAKALLDQMVG----------------------------------EPDATVWKA 611
           + G +  A+ + D+M                                    +PD     +
Sbjct: 242 KCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTS 301

Query: 612 LLSACRVHGDLELGERAANNLFELEPMNAMPYVQ-LSNMYSTAGKWEDAARVRKLMKSRG 670
           ++SAC   GD  LG      + +   +  +     L  M+S+ G W++A  V   M+ + 
Sbjct: 302 VISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKD 361

Query: 671 IRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPD 721
           +      SW    S       E  G P       K  E   +++  G VPD
Sbjct: 362 L-----VSWTAMISGY-----EKNGLP------EKAVETYTIMEHEGVVPD 396



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 2/145 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           DGF  N ++  Y   GR+  A   FN    K+  +W+ L+ GY+  G    A ELF +M 
Sbjct: 531 DGFLPNALLDMYVRCGRMEPAWNQFNSCE-KDVASWNILLTGYAQQGKGGLAVELFHKMI 589

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRG-EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
                P + T  ++L  CS  G++  G E F     K     N      +VD+  +   +
Sbjct: 590 ESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRL 649

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITG 209
            +A    K  P   +   W  ++  
Sbjct: 650 EDAYEFIKKMPIDPDPAIWGALLNA 674


>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
 gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
          Length = 742

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 266/744 (35%), Positives = 414/744 (55%), Gaps = 14/744 (1%)

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
           YA+     +AK  F+    +N ++W+ L+  ++  G   E      +M+ +G RP   T 
Sbjct: 2   YAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTF 61

Query: 137 DNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD 196
              L  C     L+ G + H   + +  +++  V   L++MY KC  +  A+ +F     
Sbjct: 62  ITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMER 121

Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
            +N ++W+ M   ++ +G  ++A+  FR M + G+++ +    +IL+AC++ +    G  
Sbjct: 122 TRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRM 181

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE--IDNEVSWNSMIVGFARQ 314
           +H CI  SGFE+ + V +A++ MY +CG ++ AR++ +  +  + + VSWN M+  +   
Sbjct: 182 IHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHN 241

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
              K+A+ L+++M  R    D  TY S+L+  +S  D+   + +H  IV    E    V 
Sbjct: 242 DRGKDAIQLYQRMQLRP---DKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVG 298

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM------ 428
           NAL+ MYAK G+   A  VF+ M+ + +ISWT++I+         EA   F  M      
Sbjct: 299 NALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKN 358

Query: 429 -RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
                + PD +   +IL+ACA+++ LE G+ V       G  S  +V  ++V +Y KCG 
Sbjct: 359 GSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGE 418

Query: 488 INDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
           I +A R+FD++ +R DV  W A+I   AQ G+  EAL+ + +M   G +PD  +FV +L 
Sbjct: 419 IEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILL 478

Query: 547 ACSHAGLAENARWYFESMDKVY-GIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
           ACSH GL +  + YF SM   Y  +     H+ C+ DLLGR G+L EA+  L+++  +PD
Sbjct: 479 ACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPD 538

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
           A  W +LL+ACR H DL+  +  AN L  LEP  A  YV LSN+Y+   KW   A+VRK 
Sbjct: 539 AVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKF 598

Query: 666 MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFA 725
           M  +G++KE G S +E    +H F + D  HP   +I  ++ ++   +KE GYVPD    
Sbjct: 599 MAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKMV 658

Query: 726 LHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLR 785
           LH V+E+ KE  L  HSE+LA+A GL++ P G P+R+ KNLRVC DCHTA K IS +  R
Sbjct: 659 LHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAGR 718

Query: 786 HIILRDSNRFHHFKAGNCSCGDYW 809
            I++RD  RFH FK G CSC DYW
Sbjct: 719 KIVVRDPTRFHLFKDGKCSCQDYW 742



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 176/345 (51%), Gaps = 18/345 (5%)

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
           MYA C     A+   +  E  N  SW  ++  FA  G  KE L   ++M    ++ D  T
Sbjct: 1   MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
           + + L        L +   +H ++V +  E    V+NAL++MY K G+L  A  VF  M+
Sbjct: 61  FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120

Query: 399 -DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
             ++VISW+ +    A HG+  EAL++F  M + GI      + +ILSAC+   +++ G+
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 180

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT--RDVITWTALIMGCAQ 515
            +H+    SG  S L V N+++ +Y +CG + +A +VFD+M    RDV++W  ++     
Sbjct: 181 MIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVH 240

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA-----GLAENARWYFESMDKVYGI 570
           N +GK+A+Q Y +M  R   PD +T+V LL ACS A     G   + +   + ++K   +
Sbjct: 241 NDRGKDAIQLYQRMQLR---PDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIV 297

Query: 571 KPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
                    ++ +  + G   EA+A+ D+M  +     W  ++SA
Sbjct: 298 GNA------LVSMYAKCGSHTEARAVFDKM-EQRSIISWTTIISA 335



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 177/370 (47%), Gaps = 29/370 (7%)

Query: 71  NTMIAAYANSGRLREAKKLFN--ETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG 128
           N ++  Y   G + EA+K+F+  +   ++  +W+ ++  Y +     +A +L+ +MQL  
Sbjct: 199 NAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRMQL-- 256

Query: 129 YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
            RP + T  ++L  CS    +  G   H   +    + N  V   LV MYAKC    EA 
Sbjct: 257 -RPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEAR 315

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-------RVEGVESNQFTFPSI 241
            +F    + ++ ++WTT+I+ Y +     +A   F+ M         + V+ +   F +I
Sbjct: 316 AVFDKM-EQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTI 374

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY--SEID 299
           L ACA VSA + G  V     S G  ++  V +A++++Y KCG+++ ARR+ +   S  D
Sbjct: 375 LNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPD 434

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV-LNCFASNIDLNNAKSV 358
            ++ WN+MI  +A+ G   EAL LF +M    ++ D F++ S+ L C  + ++       
Sbjct: 435 VQL-WNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYF 493

Query: 359 HSLIVKTGFEGYKFVNNAL------IDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITG 411
            S+  +     Y+ V   +       D+  + G L  A      +  K D ++WTSL+  
Sbjct: 494 TSMTTE-----YRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAA 548

Query: 412 CAYHGSYEEA 421
           C  H   + A
Sbjct: 549 CRNHRDLKRA 558



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 141/328 (42%), Gaps = 38/328 (11%)

Query: 380 MYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVV 439
           MYA   +   A   F+ ++ +++ SWT L+   A  G  +E L+    MR  G+ PD V 
Sbjct: 1   MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60

Query: 440 VSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM- 498
             + L +C +   L  G ++H + + S       V N+L+ +Y KCG ++ A RVF  M 
Sbjct: 61  FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENAR 558
            TR+VI+W+ +    A +G   EAL+ +  ML  G K      V +L ACS   L ++ R
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 180

Query: 559 WYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLD-------------------- 598
               S   + G +        ++ + GR G + EA+ + D                    
Sbjct: 181 -MIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYV 239

Query: 599 -------------QMVGEPDATVWKALLSACRVHGDLELGERAANNLF--ELEPMNAMPY 643
                        +M   PD   + +LLSAC    D+ LG      +   ELE  N +  
Sbjct: 240 HNDRGKDAIQLYQRMQLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEK-NVIVG 298

Query: 644 VQLSNMYSTAGKWEDAARVRKLMKSRGI 671
             L +MY+  G   +A  V   M+ R I
Sbjct: 299 NALVSMYAKCGSHTEARAVFDKMEQRSI 326



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 116/264 (43%), Gaps = 10/264 (3%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
           Q+     +++    N +++ YA  G   EA+ +F++   ++  +W+++I  Y    L  E
Sbjct: 285 QIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAE 344

Query: 117 AFELFWQM-QLEG------YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAF 169
           A  LF QM +LE        +P       +L  C+    L++G+     A       +  
Sbjct: 345 ACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKA 404

Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
           V T +V++Y KC  I EA  +F       +   W  MI  Y+Q G   +A++ F  M +E
Sbjct: 405 VGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEME 464

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ--SALIDMYAKCGDLD 287
           GV  + F+F SIL AC+     D G      + +        +Q    + D+  + G L 
Sbjct: 465 GVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLK 524

Query: 288 SARRLLEYSEID-NEVSWNSMIVG 310
            A   LE   +  + V+W S++  
Sbjct: 525 EAEEFLEKLPVKPDAVAWTSLLAA 548



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 34/167 (20%)

Query: 46  FSNSGEIDEAGQLFEKMSDR-DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSL 104
           +   GEI+EA ++F+ +  R D   WN MIA YA  G+  EA K                
Sbjct: 413 YGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALK---------------- 456

Query: 105 IYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCF 164
                          LFW+M++EG RP  ++  ++L  CS  GL  +G+ +         
Sbjct: 457 ---------------LFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYR 501

Query: 165 DLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
           ++   +     + D+  +   + EAE   +  P   + VAWT+++  
Sbjct: 502 NVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAA 548


>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 264/638 (41%), Positives = 378/638 (59%), Gaps = 33/638 (5%)

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           N ++W TMI G++ +     A+  +  M   G+  N +TFP +  +CA   A   G Q+H
Sbjct: 42  NQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIH 101

Query: 259 GCILSSGFEANVYVQSALIDMYAKCG-------------------------------DLD 287
             IL  G   +++V ++LI MYA+ G                               ++D
Sbjct: 102 AQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMD 161

Query: 288 SARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFA 347
            A+++ +   I + VSWN+MI G+A  G +KEAL LF +M   D+K D+ T  +VL+   
Sbjct: 162 KAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCT 221

Query: 348 SNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTS 407
            + ++   + +HS I   GF     + NALID+Y+K G ++ A  +F  +Q KDVISW +
Sbjct: 222 HSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNT 281

Query: 408 LITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS- 466
           LI G AY   ++EAL  F +M   G  P+ V + SIL ACA L  ++ G+ +H    K  
Sbjct: 282 LIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKL 341

Query: 467 -GGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
            G  ++ S+  SL+ +YAKCG I  AN+VFD++  + + +  A+I G A +G+   A   
Sbjct: 342 KGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDL 401

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
             +M   G +PD ITFVGLL ACSHAGL++  R  F+SM   Y I+P  +HY CMIDLLG
Sbjct: 402 LSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLG 461

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ 645
           RSG   EA+ L++ M  EPD  +W +LL AC++H +LELGE  A  L ++EP N   YV 
Sbjct: 462 RSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVL 521

Query: 646 LSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSK 705
           LSN+Y+T+ +W+D ARVR L+  +G++K PGCS +E +S VH F+  D+ HP   +IY  
Sbjct: 522 LSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIGDKFHPQNKEIYKM 581

Query: 706 IDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKN 765
           ++EI  L+ E G+V D +  L  +EEE KE  L+YHSEKLA+AFGL++   G  +RI KN
Sbjct: 582 LEEIDSLLAETGFVSDTSEVLQEMEEELKEGALSYHSEKLAIAFGLISTKPGTKLRIVKN 641

Query: 766 LRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNC 803
           LRVC +CH A K IS +Y R II RD +RFHHFK G C
Sbjct: 642 LRVCRNCHEATKLISKIYKREIIARDRSRFHHFKDGMC 679



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/442 (29%), Positives = 222/442 (50%), Gaps = 15/442 (3%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++ +G +++A ++F+  S RD  ++  MI  YA+ G + +A+K+F+E P K+  +W+++I
Sbjct: 123 YAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMI 182

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            GY+  G   EA ELF +M     +P + T+  VL  C+  G ++ G Q H +     F 
Sbjct: 183 SGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFG 242

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            N  +V  L+D+Y+KC  +  A  LF+     K+ ++W T+I GY+   +  +A+  F++
Sbjct: 243 SNLKLVNALIDLYSKCGEMERAHGLFEGL-QYKDVISWNTLIGGYAYINHHKEALLVFQE 301

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS--SGFEANVYVQSALIDMYAKC 283
           M   G   N  T  SIL ACA + A D G  +H  I     G   N  +Q++LIDMYAKC
Sbjct: 302 MLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKC 361

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
           G++++A ++ +     +  S N+MI GFA  G    A  L  +M    I+ DD T+  +L
Sbjct: 362 GNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLL 421

Query: 344 N-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM-QDKD 401
           + C  + +     K   S+ +    E        +ID+  + G    A  + N M  + D
Sbjct: 422 SACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPD 481

Query: 402 VISWTSLITGCAYHGSYEEA-LKYFSDMRISGICP-DHVVVSSILSACAELTVLEFGQQV 459
            + W SL+  C  H + E   L     M+I    P  +V++S+I +  A    +    +V
Sbjct: 482 GVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDV---ARV 538

Query: 460 HAVFLKSG-----GCSSLSVDN 476
             +    G     GCSS+ +D+
Sbjct: 539 RTLLNDKGLKKVPGCSSIEIDS 560



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 223/462 (48%), Gaps = 34/462 (7%)

Query: 86  AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL 145
           A  +F      N  +W+++I G++     I A  L+  M   G  P+ YT   + + C+ 
Sbjct: 31  AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90

Query: 146 KGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF-------------- 191
               Q G+Q H   +K    ++  V T L+ MYA+   + +A  +F              
Sbjct: 91  SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150

Query: 192 --------------KMFPDG--KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
                         KMF +   K+ V+W  MI+GY++ G   +A+E F +M    V+ ++
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDE 210

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            T  ++L+ C      + G Q+H  I + GF +N+ + +ALID+Y+KCG+++ A  L E 
Sbjct: 211 STMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEG 270

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
            +  + +SWN++I G+A    HKEAL +F++M       +D T  S+L   A    ++  
Sbjct: 271 LQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIG 330

Query: 356 KSVHSLIVK--TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
           + +H  I K   G      +  +LIDMYAK GN++ A  VF+ + +K + S  ++I G A
Sbjct: 331 RWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFA 390

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV-HAVFLKSGGCSSL 472
            HG  + A    S M+  GI PD +    +LSAC+   + + G+++  ++ L       L
Sbjct: 391 MHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKL 450

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
                ++ +  + G   +A  + +SM    D + W +L+  C
Sbjct: 451 EHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKAC 492



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 125/285 (43%), Gaps = 36/285 (12%)

Query: 363 VKTGFEGYKFVNNALID---MYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
           +K G     +  + L+D   +      L  A  VF  +Q+ + +SW ++I G A      
Sbjct: 1   IKIGLHNTNYALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPI 60

Query: 420 EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
            AL  +  M   G+ P+      +  +CA+    + G+Q+HA  LK G    L V  SL+
Sbjct: 61  SALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLI 120

Query: 480 LVYAKCGCINDANRVFDSMHTR-------------------------------DVITWTA 508
            +YA+ G + DA++VFD+   R                               DV++W A
Sbjct: 121 SMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNA 180

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
           +I G A+ G+ KEAL+ +++M+    KPD  T   +L  C+H+G  E  R     +D  +
Sbjct: 181 MISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDN-H 239

Query: 569 GIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
           G          +IDL  + G++  A  L + +  + D   W  L+
Sbjct: 240 GFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYK-DVISWNTLI 283


>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
 gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
          Length = 805

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 278/754 (36%), Positives = 405/754 (53%), Gaps = 17/754 (2%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           RDG+  ++++  Y   G L  A  +F++   K+   W+ LI  Y + G    A  LF ++
Sbjct: 60  RDGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRI 119

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
             EG         +VL  CS +  L  G   H  A++    L   V + LV MY +C  +
Sbjct: 120 LQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSL 179

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            +A  LF       + V W  MIT  SQNG   +A+E F  M   G+  +  TF S+  A
Sbjct: 180 RDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKA 239

Query: 245 CAAVSARDFGAQV---HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           C++ S     +QV   H C+  +G  ++V V +AL++ YA+CG++D AR         N 
Sbjct: 240 CSS-SPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNA 298

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS---NIDLNNAKSV 358
           VSW SMI  FA+ G H  A+  F  M      + +   P+    FA+     DL+ A+ V
Sbjct: 299 VSWTSMIAAFAQIG-HLLAVETFHAM------LLEGVVPTRSTLFAALEGCEDLHTARLV 351

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK--DVISWTSLITGCAYHG 416
            ++  + G      +   L+  YA+    + A  VF+  ++   D    T++I   A   
Sbjct: 352 EAIAQEIGVATDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCR 411

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVD 475
                 K +      GI PD ++  + L ACA L  L  G+Q+HA           +++ 
Sbjct: 412 DRRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLG 471

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           N++V +Y +CG + DA   FD M  RD I+W A++   AQ+G+ ++    +  ML  G  
Sbjct: 472 NAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFD 531

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
            + + F+ LL AC+HAGL E    +F +M   +G+ P  +HY CM+DLLGR G+L +A  
Sbjct: 532 AERVAFLNLLSACAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHG 591

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
           ++  M   PDA  W AL+ ACR++GD E G  AA  + EL   +   YV L N+YS AG+
Sbjct: 592 IVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRANHTAAYVALCNIYSAAGR 651

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
           WEDAA VRK+M   G+RK PG S +E  S+VH F+  DR HP    IY++++ +M  I+ 
Sbjct: 652 WEDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIER 711

Query: 716 AGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
           AGY       LH+VEEE KE  L +HSEKLA+AFG+++ PQG+ +R+ KNLRVC DCH A
Sbjct: 712 AGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNA 771

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            K+IS V+ R I++RD  RFHHFK G CSCGDYW
Sbjct: 772 SKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 51/97 (52%), Gaps = 1/97 (1%)

Query: 60  EKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFE 119
           ++  DRD    N +++ Y   G LR+A+  F+  P ++  +W++++   + +G   +  +
Sbjct: 461 DRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCD 520

Query: 120 LFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG-EQF 155
           LF  M  EG+   +    N+L  C+  GL++ G E F
Sbjct: 521 LFRAMLQEGFDAERVAFLNLLSACAHAGLVEAGCEHF 557


>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 266/700 (38%), Positives = 407/700 (58%), Gaps = 7/700 (1%)

Query: 33  VKPASDLNRALVD--FSNSGEIDEAGQLFEKMSDRDGFTWNTMIA-AYANSGRLREAKKL 89
           ++P  DL R  VD  F    +      L  K S+         +A AY+    +  A +L
Sbjct: 68  IQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRL 127

Query: 90  FNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLL 149
           F++   +N F+W+ LI G +  GL ++ FE F +MQ +G  P Q+    +L++C     +
Sbjct: 128 FDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSI 187

Query: 150 QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
           + G   H   +   F  + FV T L++MYAK + I ++  +F    +  N V+W  MITG
Sbjct: 188 ELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTE-VNVVSWNAMITG 246

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
           ++ N     A + F  M  EGV  +  TF  +  A   +   +   +V G  L  G ++N
Sbjct: 247 FTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSN 306

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS--WNSMIVGFARQGFHKEALSLFKKM 327
             V +ALIDM +KCG L  AR +     I    +  WN+MI G+ R GF+++AL LF KM
Sbjct: 307 TLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKM 366

Query: 328 HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE-GYKFVNNALIDMYAKQGN 386
              DI +D +TY SV N  A+   L+  K VH+  +K+G E  Y  ++NA+ + YAK G+
Sbjct: 367 CQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGS 426

Query: 387 LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSA 446
           L+    VFN M+D+D+ISWTSL+T  +    +++A++ FS+MR  GI P+    SS+L +
Sbjct: 427 LEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVS 486

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITW 506
           CA L +LE+GQQVH +  K G      ++++LV +YAKCGC+ DA +VF+ +   D ++W
Sbjct: 487 CANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSW 546

Query: 507 TALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDK 566
           TA+I G AQ+G   +ALQ + +M+  G +P+ +TF+ +LFACSH GL E    YF+ M K
Sbjct: 547 TAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKK 606

Query: 567 VYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGE 626
            YG+ P  +HYAC++DLL R G L +A   + +M  EP+  VW+ LL ACRVHG++ELGE
Sbjct: 607 TYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGE 666

Query: 627 RAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQV 686
            AA  +   +  N+  YV LSN Y  +G ++D   +R +MK +G++KEPGCSW+  N  +
Sbjct: 667 LAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKEPGCSWISVNGTL 726

Query: 687 HIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFAL 726
           H F + D+ HP +  IY+K++E+ L +     VPD+++ L
Sbjct: 727 HKFYAGDQQHPEKDKIYAKLEELKLKLISLDDVPDLSYEL 766


>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 274/767 (35%), Positives = 409/767 (53%), Gaps = 92/767 (11%)

Query: 47  SNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIY 106
           SNS  +DEA  L              +++ YA  G L+E +++F+    KN + W+ ++ 
Sbjct: 127 SNSVGVDEALGL-------------KLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVS 173

Query: 107 GYSNYGLDIEA---FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC 163
            Y+  G   E+   F++  +  +EG RP                                
Sbjct: 174 EYAKIGDFKESICLFKIMVEKGIEGKRPES------------------------------ 203

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
                                  A  LF    D ++ ++W +MI+GY  NG   + +  +
Sbjct: 204 -----------------------ASELFDKLCD-RDVISWNSMISGYVSNGLTERGLGIY 239

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
           + M   G++ +  T  S+L  CA       G  VH   + S FE  +   + L+DMY+KC
Sbjct: 240 KQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKC 299

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
           GDLD A R+ E     N VSW SMI G+ R G+   A+ L ++M    +K+D     S+L
Sbjct: 300 GDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSIL 359

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVI 403
           +  A +  L+N K VH  I         FV NAL+DMYAK G+++ A  VF+ M  KD+I
Sbjct: 360 HACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDII 419

Query: 404 SWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVF 463
           SW +++                       + PD   ++ IL ACA L+ LE G+++H   
Sbjct: 420 SWNTMV---------------------GELKPDSRTMACILPACASLSALERGKEIHGYI 458

Query: 464 LKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEAL 523
           L++G  S   V N+LV +Y KCG +  A  +FD + ++D+++WT +I G   +G G EA+
Sbjct: 459 LRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAI 518

Query: 524 QFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDL 583
             +++M   G +PD ++F+ +L+ACSH+GL E    +F  M   + I+P  +HYACM+DL
Sbjct: 519 ATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDL 578

Query: 584 LGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPY 643
           L R+G L +A   ++ +   PDAT+W ALL  CR++ D+EL E+ A  +FELEP N   Y
Sbjct: 579 LSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYY 638

Query: 644 VQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFIS-EDRGHPLRTDI 702
           V L+N+Y+ A K E+  R+R+ +  +G+RK PGCSW+E   +V++F+S  +  HP    I
Sbjct: 639 VLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKI 698

Query: 703 YSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRI 762
            S + ++   +KE GY P   +AL N +E  KE+ L  HSEKLA+AFGLLTLP    IR+
Sbjct: 699 ESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRV 758

Query: 763 FKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            KNLRVCGDCH   K++S    R I+LRDSNRFHHFK G CSC  +W
Sbjct: 759 TKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 154/521 (29%), Positives = 256/521 (49%), Gaps = 47/521 (9%)

Query: 18  KIIGPARYTHNV--GNSVKPASDLNRALVDF-SNSGEIDEAGQLFEKMSDRDGFTWNTMI 74
           K +   +  H++   NSV     L   LV F +  G++ E  ++F+ M  ++ + WN M+
Sbjct: 113 KSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMV 172

Query: 75  AAYANSGRLRE--------------------AKKLFNETPFKNFFTWSSLIYGYSNYGLD 114
           + YA  G  +E                    A +LF++   ++  +W+S+I GY + GL 
Sbjct: 173 SEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLT 232

Query: 115 IEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
                ++ QM   G      T+ +VL  C+  G L  G+  H  AIK+ F+        L
Sbjct: 233 ERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTL 292

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           +DMY+KC  +  A  +F+   + +N V+WT+MI GY+++G+   AI   + M  EGV+ +
Sbjct: 293 LDMYSKCGDLDGALRVFEKMGE-RNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLD 351

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
                SIL ACA   + D G  VH  I ++   +N++V +AL+DMYAKCG ++ A  +  
Sbjct: 352 VVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFS 411

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
              + + +SWN+M+                      ++K D  T   +L   AS   L  
Sbjct: 412 TMVVKDIISWNTMV---------------------GELKPDSRTMACILPACASLSALER 450

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
            K +H  I++ G+   + V NAL+D+Y K G L  A ++F+++  KD++SWT +I G   
Sbjct: 451 GKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGM 510

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLS 473
           HG   EA+  F++MR +GI PD V   SIL AC+   +LE G +   +          L 
Sbjct: 511 HGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLE 570

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMGC 513
               +V + ++ G ++ A +  +++    D   W AL+ GC
Sbjct: 571 HYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGC 611



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 143/477 (29%), Positives = 209/477 (43%), Gaps = 86/477 (18%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL--- 293
           T+ S+L  CA + +   G +VH  I S+    +  +   L+  YA CGDL   RR+    
Sbjct: 101 TYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTM 160

Query: 294 -------------EYSEI----------------------------------DNEV-SWN 305
                        EY++I                                  D +V SWN
Sbjct: 161 EKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWN 220

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           SMI G+   G  +  L ++K+M    I +D  T  SVL   A++  L+  K+VHSL +K+
Sbjct: 221 SMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKS 280

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
            FE     +N L+DMY+K G+LD A  VF  M +++V+SWTS+I G    G  + A+   
Sbjct: 281 SFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILL 340

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             M   G+  D V ++SIL ACA    L+ G+ VH     +   S+L V N+L+ +YAKC
Sbjct: 341 QQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKC 400

Query: 486 GCINDANRVFDSMHTRDVITWTALI--------------MGCAQNGKGKEALQFYDQMLA 531
           G +  AN VF +M  +D+I+W  ++                CA     +   + +  +L 
Sbjct: 401 GSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACILPACASLSALERGKEIHGYILR 460

Query: 532 RGTKPDYIT---FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD--HYACMIDLLGR 586
            G   D       V L   C   GL   AR  F+ +       P  D   +  MI   G 
Sbjct: 461 NGYSSDRHVANALVDLYVKCGVLGL---ARLLFDMI-------PSKDLVSWTVMIAGYGM 510

Query: 587 SGKLIEAKALLDQMVG---EPDATVWKALLSACRVHGDLELGER---AANNLFELEP 637
            G   EA A  ++M     EPD   + ++L AC   G LE G R      N F +EP
Sbjct: 511 HGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEP 567



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 187/400 (46%), Gaps = 52/400 (13%)

Query: 42  ALVDFSNSGEIDEAGQLFEKMSDRDGFTW-----NTMIAAYANSGRLREAKKLFNETPFK 96
            LV  +NSG +   G+    ++ +  F       NT++  Y+  G L  A ++F +   +
Sbjct: 257 VLVGCANSGTLS-LGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGER 315

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
           N  +W+S+I GY+  G    A  L  QM+ EG +     + ++L  C+  G L  G+  H
Sbjct: 316 NVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVH 375

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
            Y        N FV   L+DMYAKC  +  A  +F      K+ ++W TM          
Sbjct: 376 DYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVV-KDIISWNTM---------- 424

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
                      V  ++ +  T   IL ACA++SA + G ++HG IL +G+ ++ +V +AL
Sbjct: 425 -----------VGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANAL 473

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           +D+Y KCG L  AR L +     + VSW  MI G+   G+  EA++ F +M    I+ D+
Sbjct: 474 VDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDE 533

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN------------ALIDMYAKQ 384
            ++ S+L  +A +         HS +++ G+  +  + N             ++D+ ++ 
Sbjct: 534 VSFISIL--YACS---------HSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRT 582

Query: 385 GNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           GNL  A+  +  L    D   W +L+ GC  +   E A K
Sbjct: 583 GNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEK 622



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 174/396 (43%), Gaps = 72/396 (18%)

Query: 298 IDNEVS-WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
           ID++V+ +N+ I+ F + G  + A+ L       +++    TY SVL   A    L + K
Sbjct: 62  IDHQVTDYNAKILHFCQLGDLENAMELVCMCQKSELETK--TYGSVLQLCAGLKSLTDGK 119

Query: 357 SVHSLIVKTGFE-----GYKFVN--------------------------NALIDMYAKQG 385
            VHS+I           G K V+                          N ++  YAK G
Sbjct: 120 KVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG 179

Query: 386 NLD---CAFMV-----------------FNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           +     C F +                 F+ + D+DVISW S+I+G   +G  E  L  +
Sbjct: 180 DFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIY 239

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             M   GI  D   + S+L  CA    L  G+ VH++ +KS     ++  N+L+ +Y+KC
Sbjct: 240 KQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKC 299

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G ++ A RVF+ M  R+V++WT++I G  ++G    A+    QM   G K D +    +L
Sbjct: 300 GDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSIL 359

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYAC--MIDLLGRSGKLIEAKALL------ 597
            AC+ +G  +N +   +  D +       + + C  ++D+  + G +  A ++       
Sbjct: 360 HACARSGSLDNGK---DVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVK 416

Query: 598 -----DQMVGE--PDATVWKALLSACRVHGDLELGE 626
                + MVGE  PD+     +L AC     LE G+
Sbjct: 417 DIISWNTMVGELKPDSRTMACILPACASLSALERGK 452


>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 266/644 (41%), Positives = 385/644 (59%), Gaps = 33/644 (5%)

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           N + W TM+ GY+ +     A++ +  M   G+  N +TFP +L +CA   A + G Q+H
Sbjct: 30  NQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQIH 89

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE--------------------- 297
           G +L  G+E ++YV ++LI MYA+ G L+ A ++ + S                      
Sbjct: 90  GHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIR 149

Query: 298 ----------IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFA 347
                     + + VSWN+MI G+A  G +KEAL LFK+M   +++ D+ T  +VL+  A
Sbjct: 150 SAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACA 209

Query: 348 SNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTS 407
            +  +   + VHS I   GF     + NALID+Y+K G ++ A  +F  +  KDV+SW +
Sbjct: 210 QSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNT 269

Query: 408 LITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS- 466
           LI G  +   Y+EAL  F +M  SG  P+ V + SIL ACA L  ++ G+ +H    K  
Sbjct: 270 LIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKL 329

Query: 467 -GGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
               ++ S+  SL+ +YAKCG I  A++VF+SM  + + +W A+I G A +G+       
Sbjct: 330 KDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDL 389

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
           + +M   G +PD ITFVGLL ACSH+G  +  R  F+SM + Y I P  +HY CMIDLLG
Sbjct: 390 FSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLG 449

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ 645
            SG   EAK ++  M  EPD  +W +LL ACR HG+LEL E  A NL ++EP N   YV 
Sbjct: 450 HSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVL 509

Query: 646 LSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSK 705
           LSN+Y+TAG+W++ A+VR L+  +G++K PGCS +E +S+VH FI  D+ HP   +IY  
Sbjct: 510 LSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVGDKLHPRNREIYGM 569

Query: 706 IDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKN 765
           ++E+  L++EAG+VPD +  L  +EEE KE  L +HSEKLA+AFGL++   G  + I KN
Sbjct: 570 LEEMEALLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKN 629

Query: 766 LRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           LRVC +CH A K +S +Y R II RD  RFHHF+ G CSC D+W
Sbjct: 630 LRVCRNCHEATKLVSKIYKREIIARDRTRFHHFRDGVCSCNDFW 673



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 156/552 (28%), Positives = 258/552 (46%), Gaps = 78/552 (14%)

Query: 86  AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL 145
           A  +F      N   W++++ GY+     + A +L+  M   G  P+ YT   +L+ C+ 
Sbjct: 19  AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78

Query: 146 KGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF-------------- 191
               + G+Q HG+ +K  ++ + +V T L+ MYA+   + +A  +F              
Sbjct: 79  SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138

Query: 192 --------------KMFPD--GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
                         +MF +   K+ V+W  MI+GY++ G   +A+E F++M    V  ++
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            T  ++L+ACA   + + G QVH  I   GF +N+ + +ALID+Y+KCG +++A  L E 
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEG 258

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               + VSWN++I G+     +KEAL LF++M       +D T  S+L   A    ++  
Sbjct: 259 LSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIG 318

Query: 356 KSVHSLIVKTGFEGYKFVNNA------LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
           + +H  I K      K V NA      LIDMYAK G+++ A  VFN M  K + SW ++I
Sbjct: 319 RWIHVYIDKK----LKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMI 374

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
            G A HG        FS MR +GI PD +    +LSAC+    L+ G+ +          
Sbjct: 375 FGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIF--------- 425

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
            S++ D  +       GC+ D                   ++G   +G  KEA +    M
Sbjct: 426 KSMTQDYDITPKLEHYGCMID-------------------LLG--HSGLFKEAKEMIKTM 464

Query: 530 LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSG- 588
                +PD + +  LL AC   G  E A  +  ++ KV    PG   Y  + ++   +G 
Sbjct: 465 ---PMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGS--YVLLSNIYATAGE 519

Query: 589 --KLIEAKALLD 598
             ++ + +ALL+
Sbjct: 520 WDEVAKVRALLN 531



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 227/448 (50%), Gaps = 23/448 (5%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++ +G +++A ++F++ S RD  ++  +I  YA+SG +R A+++F+E P K+  +W+++I
Sbjct: 111 YAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMI 170

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            GY+  G   EA ELF +M     RP + T+  VL  C+    ++ G Q H +     F 
Sbjct: 171 SGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFG 230

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            N  +V  L+D+Y+KC  +  A  LF+     K+ V+W T+I GY+      +A+  F++
Sbjct: 231 SNLKIVNALIDLYSKCGQVETACGLFEGL-SCKDVVSWNTLIGGYTHMNLYKEALLLFQE 289

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN--VYVQSALIDMYAKC 283
           M   G   N  T  SIL ACA + A D G  +H  I     +      ++++LIDMYAKC
Sbjct: 290 MLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKC 349

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
           GD+++A ++       +  SWN+MI GFA  G       LF +M    I+ DD T+  +L
Sbjct: 350 GDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLL 409

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN-----ALIDMYAKQGNL-DCAFMVFNLM 397
           +  + +  L+  +     I K+  + Y           +ID+    G   +   M+  + 
Sbjct: 410 SACSHSGKLDLGRH----IFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMP 465

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSD-MRISGICP-DHVVVSSILSACAELTVLEF 455
            + D + W SL+  C  HG+ E A  +  + M++    P  +V++S+I +   E   +  
Sbjct: 466 MEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEV-- 523

Query: 456 GQQVHAVFLKSG-----GCSSLSVDNSL 478
             +V A+    G     GCSS+ +D+ +
Sbjct: 524 -AKVRALLNGKGMKKVPGCSSIEIDSEV 550


>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 804

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 263/709 (37%), Positives = 399/709 (56%), Gaps = 67/709 (9%)

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
           N F    L+ M+AK   + +A  +F   P+ ++ V+WT M+ G ++ G   +AI+   DM
Sbjct: 97  NVFTWNSLLSMFAKSGRLADARGVFAEMPE-RDAVSWTVMVVGLNRAGRFGEAIKTLLDM 155

Query: 227 RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD- 285
             +G    QFT  ++L++CA   A   G +VH  ++  G  + V V +++++MY KCGD 
Sbjct: 156 TADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDS 215

Query: 286 ------------------------------LDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
                                         +D A  L E     + VSWN+MI G+ + G
Sbjct: 216 ETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNG 275

Query: 316 FHKEALSLFKKM-HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
              +AL LF +M H   +  D+FT  SVL+  A+  ++   K VH+ I++T       V 
Sbjct: 276 LDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVT 335

Query: 375 NALIDMYAKQG---------------------------------NLDCAFMVFNLMQDKD 401
           NALI  YAK G                                 +++ A  +F +M ++D
Sbjct: 336 NALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRD 395

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
           V++WT++I G   +G  +EA+  F  M   G  P+   ++++LS CA L  L++G+Q+H 
Sbjct: 396 VVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHC 455

Query: 462 VFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGK 520
             ++S    S SV N+++ +YA+ G    A R+FD +  R + ITWT++I+  AQ+G+G+
Sbjct: 456 RAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGE 515

Query: 521 EALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACM 580
           EA+  +++ML  G +PD IT+VG+L ACSHAG     + Y++ +   + I P   HYACM
Sbjct: 516 EAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACM 575

Query: 581 IDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNA 640
           +DLL R+G   EA+  + +M  EPDA  W +LLSACRVH + EL E AA  L  ++P N+
Sbjct: 576 VDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNS 635

Query: 641 MPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRT 700
             Y  ++N+YS  G+W DAAR+ K  K + +RKE G SW    S++H+F ++D  HP R 
Sbjct: 636 GAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRD 695

Query: 701 DIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPI 760
            +Y+    +   IK AG+VPD+   LH+V++E KE  L+ HSEKLA+AFGL++ P+   +
Sbjct: 696 AVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTL 755

Query: 761 RIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           R+ KNLRVC DCH A+K IS V  R II+RD+ RFHHF+ G CSC DYW
Sbjct: 756 RVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 155/535 (28%), Positives = 262/535 (48%), Gaps = 71/535 (13%)

Query: 49  SGEIDEAGQLFEK--MSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIY 106
           +G + +A +LF++  ++ R+ FTWN++++ +A SGRL +A+ +F E P ++  +W+ ++ 
Sbjct: 78  AGGLRDARRLFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVV 137

Query: 107 GYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDL 166
           G +  G   EA +    M  +G+ P+Q+TL NVL  C++      G + H + +K     
Sbjct: 138 GLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGS 197

Query: 167 NAFVVTGLVDMYAKC------KCIFE-------------------------AEYLFKMFP 195
              V   +++MY KC        +FE                         AE LF+  P
Sbjct: 198 CVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMP 257

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE-GVESNQFTFPSILTACAAVSARDFG 254
           D ++ V+W  MI GY+QNG   KA++ F  M  E  +  ++FT  S+L+ACA +     G
Sbjct: 258 D-RSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIG 316

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS-EID-------------- 299
            QVH  IL +    N  V +ALI  YAK G +++ARR+++ S E D              
Sbjct: 317 KQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYV 376

Query: 300 ------------------NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPS 341
                             + V+W +MIVG+ + G + EA+ LF+ M     + + +T  +
Sbjct: 377 KIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAA 436

Query: 342 VLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN-LMQDK 400
           VL+  AS   L+  K +H   +++  E    V+NA+I MYA+ G+   A  +F+ +   K
Sbjct: 437 VLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRK 496

Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
           + I+WTS+I   A HG  EEA+  F +M  +G+ PD +    +LSAC+    +  G++ +
Sbjct: 497 ETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYY 556

Query: 461 AVFLKSGGCS-SLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
                    +  +S    +V + A+ G  ++A      M    D I W +L+  C
Sbjct: 557 DQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSAC 611



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/448 (28%), Positives = 219/448 (48%), Gaps = 42/448 (9%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  L  +   G+ + A  +FE+M  R   +WN M++   + GR+  A+ LF   P ++  
Sbjct: 203 NSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIV 262

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
           +W+++I GY+  GLD +A +LF +M  E    P ++T+ +VL  C+  G ++ G+Q H Y
Sbjct: 263 SWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAY 322

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF--------------------------- 191
            ++T    N+ V   L+  YAK   +  A  +                            
Sbjct: 323 ILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDME 382

Query: 192 ---KMFP--DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
              +MF   + ++ VAWT MI GY QNG   +AI+ FR M   G E N +T  ++L+ CA
Sbjct: 383 SAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCA 442

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE-VSWN 305
           +++  D+G Q+H   + S  E +  V +A+I MYA+ G    ARR+ +      E ++W 
Sbjct: 443 SLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWT 502

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           SMIV  A+ G  +EA+ LF++M    ++ D  TY  VL+  +    +N  K  +  I   
Sbjct: 503 SMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNE 562

Query: 366 GFEGYKFVNNA-LIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALK 423
                +  + A ++D+ A+ G    A      M  + D I+W SL++ C  H + E  L 
Sbjct: 563 HQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAE--LA 620

Query: 424 YFSDMRISGICPD----HVVVSSILSAC 447
             +  ++  I P+    +  ++++ SAC
Sbjct: 621 ELAAEKLLSIDPNNSGAYSAIANVYSAC 648



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 139/277 (50%), Gaps = 5/277 (1%)

Query: 37  SDLNRALVD-FSNSGEIDEAGQLFEKM--SDRDGFTWNTMIAAYANSGRLREAKKLFNET 93
           S +  AL+  ++ SG ++ A ++ ++   +D +  ++  ++  Y   G +  A+++F   
Sbjct: 332 SQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVM 391

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE 153
             ++   W+++I GY   G + EA +LF  M   G  P+ YTL  VL +C+    L  G+
Sbjct: 392 NNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGK 451

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQN 213
           Q H  AI++  + ++ V   ++ MYA+      A  +F      K  + WT+MI   +Q+
Sbjct: 452 QIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQH 511

Query: 214 GYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
           G G +A+  F +M   GVE ++ T+  +L+AC+     + G + +  I +    A     
Sbjct: 512 GQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSH 571

Query: 274 SA-LIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
            A ++D+ A+ G    A+  +    ++ + ++W S++
Sbjct: 572 YACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLL 608



 Score = 42.7 bits (99), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 89/226 (39%), Gaps = 50/226 (22%)

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAK----CGCINDANRVFDS--MHTRDVITWTAL 509
           G+ +HA  +K+G  +S  + N+L+  Y +     G + DA R+FD   +  R+V TW +L
Sbjct: 45  GRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNSL 104

Query: 510 IMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG 569
           +   A++G+  +A   + +M  R      +  VG                          
Sbjct: 105 LSMFAKSGRLADARGVFAEMPERDAVSWTVMVVG-------------------------- 138

Query: 570 IKPGPDHYACMIDLLGRSGKLIEA-KALLDQMVG--EPDATVWKALLSACRVHGDLELGE 626
                         L R+G+  EA K LLD       P       +LS+C V     +G 
Sbjct: 139 --------------LNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGR 184

Query: 627 RAANNLFELEPMNAMPYVQ-LSNMYSTAGKWEDAARVRKLMKSRGI 671
           +  + + +L   + +P    + NMY   G  E A  V + M  R +
Sbjct: 185 KVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSV 230


>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
          Length = 1084

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 264/703 (37%), Positives = 394/703 (56%), Gaps = 25/703 (3%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           + F  N +I  Y   G  R A+++F + P ++  T+++LI G++       A E+F +MQ
Sbjct: 177 ETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQ 236

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G  P   T+ ++L  C+  G LQ+G Q H Y  K     +  +   L+D+Y KC  + 
Sbjct: 237 SSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVE 296

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A  +F +  +  N V W  ++  + Q     K+ E F  M+  G+  NQFT+P IL  C
Sbjct: 297 TALVIFNL-GNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTC 355

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
                 D G Q+H   + +GFE+++YV   LIDMY+K G L+ ARR+LE  +  + VSW 
Sbjct: 356 TCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWT 415

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           SMI G+ +  + K+AL+ FK+M    I  D+    S ++  A    +     +H+ +  +
Sbjct: 416 SMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVS 475

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G+ G   + NAL+++YA+ G +  AF  F  ++ KD I+W  L++G A  G +EEALK F
Sbjct: 476 GYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVF 535

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             M  SG+  +     S LSA A L  ++ G+Q+HA  +K+G      V N+L+ +Y KC
Sbjct: 536 MRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKC 595

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G   DA   F  M  R+ ++W  +I  C+Q+G+G EAL F+DQM   G            
Sbjct: 596 GSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQMKKEGLS---------- 645

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
                         YF+SM   YGI+P PDHYAC+ID+ GR+G+L  AK  +++M    D
Sbjct: 646 --------------YFKSMSDKYGIRPRPDHYACVIDIFGRAGQLDRAKKFVEEMPIAAD 691

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
           A VW+ LLSAC+VH ++E+GE AA +L ELEP ++  YV LSN Y+  GKW +  +VRK+
Sbjct: 692 AMVWRTLLSACKVHKNIEVGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKM 751

Query: 666 MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFA 725
           M+ RG+RKEPG SW+E  + VH F   DR HPL   IY+ +  I   + + GY  +    
Sbjct: 752 MRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHL 811

Query: 726 LHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRV 768
            H+ E+EG++     HSEKLAV FGL++LP   P+R+ KNLRV
Sbjct: 812 FHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV 854



 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 176/556 (31%), Positives = 297/556 (53%), Gaps = 3/556 (0%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           +D    N +I  Y+ +G +  A+++F E   ++  +W +++ GY+  GL  EA  L+ QM
Sbjct: 75  KDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYRQM 134

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
              G  P+ Y L +VL  C+   L  +G   H    K  F    FV   L+ +Y +C   
Sbjct: 135 HRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSF 194

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
             AE +F   P  ++ V + T+I+G++Q  +G  A+E F +M+  G+  +  T  S+L A
Sbjct: 195 RLAERVFYDMPH-RDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAA 253

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           CA++     G Q+H  +  +G  ++  ++ +L+D+Y KCGD+++A  +       N V W
Sbjct: 254 CASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLW 313

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N ++V F +     ++  LF +M    I+ + FTYP +L       +++  + +HSL VK
Sbjct: 314 NLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVK 373

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
           TGFE   +V+  LIDMY+K G L+ A  V  ++++KDV+SWTS+I G   H   ++AL  
Sbjct: 374 TGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAA 433

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           F +M+  GI PD++ ++S +S CA +  +  G Q+HA    SG    +S+ N+LV +YA+
Sbjct: 434 FKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYAR 493

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG I +A   F+ +  +D ITW  L+ G AQ+G  +EAL+ + +M   G K +  TFV  
Sbjct: 494 CGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSA 553

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L A ++    +  +     + K  G     +    +I L G+ G   +AK    +M  E 
Sbjct: 554 LSASANLAEIKQGKQIHARVIKT-GHSFETEVGNALISLYGKCGSFEDAKMEFSEM-SER 611

Query: 605 DATVWKALLSACRVHG 620
           +   W  ++++C  HG
Sbjct: 612 NEVSWNTIITSCSQHG 627



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 123/376 (32%), Positives = 210/376 (55%), Gaps = 1/376 (0%)

Query: 58  LFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEA 117
           LF+     D     +++  Y   G +  A  +FN     N   W+ ++  +       ++
Sbjct: 270 LFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKS 329

Query: 118 FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
           FELF QMQ  G RP+Q+T   +LR C+  G +  GEQ H  ++KT F+ + +V   L+DM
Sbjct: 330 FELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDM 389

Query: 178 YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
           Y+K   + +A  + +M  + K+ V+WT+MI GY Q+ Y   A+  F++M+  G+  +   
Sbjct: 390 YSKYGWLEKARRVLEMLKE-KDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIG 448

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
             S ++ CA + A   G Q+H  +  SG+  +V + +AL+++YA+CG +  A    E  E
Sbjct: 449 LASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIE 508

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
             +E++WN ++ GFA+ G H+EAL +F +M    +K + FT+ S L+  A+  ++   K 
Sbjct: 509 HKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQ 568

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           +H+ ++KTG      V NALI +Y K G+ + A M F+ M +++ +SW ++IT C+ HG 
Sbjct: 569 IHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGR 628

Query: 418 YEEALKYFSDMRISGI 433
             EAL +F  M+  G+
Sbjct: 629 GLEALDFFDQMKKEGL 644



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 212/436 (48%), Gaps = 21/436 (4%)

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR- 251
           M   G   + W+  + G+       K +  F D   +        F   L AC     R 
Sbjct: 1   MTRRGAASLGWS--LAGFLAQEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRW 58

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
               ++H   ++ G   +  V + LID+Y+K G +  ARR+ E     + VSW +M+ G+
Sbjct: 59  QVVPEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGY 118

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
           A+ G  +EAL L+++MH   +    +   SVL+           +SVH+   K GF    
Sbjct: 119 AQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSET 178

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
           FV NALI +Y + G+   A  VF  M  +D +++ +LI+G A     E AL+ F +M+ S
Sbjct: 179 FVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSS 238

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
           G+ PD V +SS+L+ACA L  L+ G Q+H+   K+G  S   ++ SL+ +Y KCG +  A
Sbjct: 239 GLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETA 298

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
             +F+  +  +V+ W  +++   Q     ++ + + QM   G +P+  T+  +L  C+  
Sbjct: 299 LVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCT 358

Query: 552 G---LAE-----NARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           G   L E     + +  FES   V G+         +ID+  + G L +A+ +L+ M+ E
Sbjct: 359 GEIDLGEQIHSLSVKTGFESDMYVSGV---------LIDMYSKYGWLEKARRVLE-MLKE 408

Query: 604 PDATVWKALLSACRVH 619
            D   W ++++    H
Sbjct: 409 KDVVSWTSMIAGYVQH 424



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 115/269 (42%), Gaps = 57/269 (21%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           ALV+ ++  G I EA   FE++  +D  TWN +++ +A SG                   
Sbjct: 486 ALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSG------------------- 526

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
                       L  EA ++F +M   G + + +T  + L   +    +++G+Q H   I
Sbjct: 527 ------------LHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVI 574

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAI 220
           KT       V   L+ +Y KC    +A+  F    + +N V+W T+IT  SQ+G G +A+
Sbjct: 575 KTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSE-RNEVSWNTIITSCSQHGRGLEAL 633

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
           + F  M+ EG+      F S+          D     + C+               ID++
Sbjct: 634 DFFDQMKKEGLS----YFKSMSDKYGIRPRPDH----YACV---------------IDIF 670

Query: 281 AKCGDLDSARRLLEYSEI-DNEVSWNSMI 308
            + G LD A++ +E   I  + + W +++
Sbjct: 671 GRAGQLDRAKKFVEEMPIAADAMVWRTLL 699


>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
          Length = 804

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 261/709 (36%), Positives = 400/709 (56%), Gaps = 67/709 (9%)

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
           N F    L+ M+AK   + +A  +F   P+ ++ V+WT M+ G ++ G   +AI+   DM
Sbjct: 97  NVFTWNSLLSMFAKSGRLADARGVFAEMPE-RDAVSWTVMVVGLNRAGRFGEAIKTLLDM 155

Query: 227 RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDL 286
             +G    QFT  ++L++CA   A   G +VH  ++  G  + V V +++++MY KCGD 
Sbjct: 156 TADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDA 215

Query: 287 DSARRLLEYSEIDNE-------------------------------VSWNSMIVGFARQG 315
           ++A  + E   + +                                VSWN+MI G+ + G
Sbjct: 216 ETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNG 275

Query: 316 FHKEALSLFKKM-HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
              +AL LF +M H   +  D+FT  SVL+  A+  ++   K VH+ I++T       V 
Sbjct: 276 LDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVT 335

Query: 375 NALIDMYAKQG---------------------------------NLDCAFMVFNLMQDKD 401
           NALI  YAK G                                 +++ A  +F +M ++D
Sbjct: 336 NALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRD 395

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
           V++WT++I G   +G  +EA+  F  M   G  P+   ++++LS CA L  L++G+Q+H 
Sbjct: 396 VVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHC 455

Query: 462 VFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGK 520
             ++S    S SV N+++ +YA+ G    A R+FD +  R + ITWT++I+  AQ+G+G+
Sbjct: 456 RAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGE 515

Query: 521 EALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACM 580
           EA+  +++ML  G +PD IT+VG+L ACSHAG     + Y++ +   + I P   HYACM
Sbjct: 516 EAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACM 575

Query: 581 IDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNA 640
           +DLL R+G   EA+  + +M  EPDA  W +LLSACRVH + EL E AA  L  ++P N+
Sbjct: 576 VDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNS 635

Query: 641 MPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRT 700
             Y  ++N+YS  G+W DAAR+ K  K + +RKE G SW    S++H+F ++D  HP R 
Sbjct: 636 GAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRD 695

Query: 701 DIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPI 760
            +Y+    +   IK AG+VPD+   LH+V++E KE  L+ HSEKLA+AFGL++ P+   +
Sbjct: 696 AVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTL 755

Query: 761 RIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           R+ KNLRVC DCH A+K IS V  R II+RD+ RFHHF+ G CSC DYW
Sbjct: 756 RVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 155/535 (28%), Positives = 262/535 (48%), Gaps = 71/535 (13%)

Query: 49  SGEIDEAGQLFEK--MSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIY 106
           +G + +A +LF++  ++ R+ FTWN++++ +A SGRL +A+ +F E P ++  +W+ ++ 
Sbjct: 78  AGGLRDARRLFDEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVV 137

Query: 107 GYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDL 166
           G +  G   EA +    M  +G+ P+Q+TL NVL  C++      G + H + +K     
Sbjct: 138 GLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGS 197

Query: 167 NAFVVTGLVDMYAKC------KCIFE-------------------------AEYLFKMFP 195
              V   +++MY KC        +FE                         AE LF+  P
Sbjct: 198 CVPVANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMP 257

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE-GVESNQFTFPSILTACAAVSARDFG 254
            G++ V+W  MI GY+QNG   KA++ F  M  E  +  ++FT  S+L+ACA +     G
Sbjct: 258 -GRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIG 316

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS-EID-------------- 299
            QVH  IL +    N  V +ALI  YAK G +++ARR+++ S E D              
Sbjct: 317 KQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYV 376

Query: 300 ------------------NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPS 341
                             + V+W +MIVG+ + G + EA+ LF+ M     + + +T  +
Sbjct: 377 KIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAA 436

Query: 342 VLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN-LMQDK 400
           VL+  AS   L+  K +H   +++  E    V+NA+I MYA+ G+   A  +F+ +   K
Sbjct: 437 VLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRK 496

Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
           + I+WTS+I   A HG  EEA+  F +M  +G+ PD +    +LSAC+    +  G++ +
Sbjct: 497 ETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYY 556

Query: 461 AVFLKSGGCS-SLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
                    +  +S    +V + A+ G  ++A      M    D I W +L+  C
Sbjct: 557 DQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSAC 611



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/448 (28%), Positives = 219/448 (48%), Gaps = 42/448 (9%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  L  +   G+ + A  +FE+M  R   +WN M++   + GR+  A+ LF   P ++  
Sbjct: 203 NSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIV 262

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
           +W+++I GY+  GLD +A +LF +M  E    P ++T+ +VL  C+  G ++ G+Q H Y
Sbjct: 263 SWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAY 322

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF--------------------------- 191
            ++T    N+ V   L+  YAK   +  A  +                            
Sbjct: 323 ILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDME 382

Query: 192 ---KMFP--DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
              +MF   + ++ VAWT MI GY QNG   +AI+ FR M   G E N +T  ++L+ CA
Sbjct: 383 SAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCA 442

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE-VSWN 305
           +++  D+G Q+H   + S  E +  V +A+I MYA+ G    ARR+ +      E ++W 
Sbjct: 443 SLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWT 502

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           SMIV  A+ G  +EA+ LF++M    ++ D  TY  VL+  +    +N  K  +  I   
Sbjct: 503 SMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNE 562

Query: 366 GFEGYKFVNNA-LIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALK 423
                +  + A ++D+ A+ G    A      M  + D I+W SL++ C  H + E  L 
Sbjct: 563 HQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAE--LA 620

Query: 424 YFSDMRISGICPD----HVVVSSILSAC 447
             +  ++  I P+    +  ++++ SAC
Sbjct: 621 ELAAEKLLSIDPNNSGAYSAIANVYSAC 648



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 139/277 (50%), Gaps = 5/277 (1%)

Query: 37  SDLNRALVD-FSNSGEIDEAGQLFEKM--SDRDGFTWNTMIAAYANSGRLREAKKLFNET 93
           S +  AL+  ++ SG ++ A ++ ++   +D +  ++  ++  Y   G +  A+++F   
Sbjct: 332 SQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVM 391

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE 153
             ++   W+++I GY   G + EA +LF  M   G  P+ YTL  VL +C+    L  G+
Sbjct: 392 NNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGK 451

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQN 213
           Q H  AI++  + ++ V   ++ MYA+      A  +F      K  + WT+MI   +Q+
Sbjct: 452 QIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQH 511

Query: 214 GYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
           G G +A+  F +M   GVE ++ T+  +L+AC+     + G + +  I +    A     
Sbjct: 512 GQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSH 571

Query: 274 SA-LIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
            A ++D+ A+ G    A+  +    ++ + ++W S++
Sbjct: 572 YACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLL 608



 Score = 43.5 bits (101), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 90/226 (39%), Gaps = 50/226 (22%)

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAK----CGCINDANRVFDS--MHTRDVITWTAL 509
           G+ +HA  +K+G  +S  + N+L+  Y +     G + DA R+FD   +  R+V TW +L
Sbjct: 45  GRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNSL 104

Query: 510 IMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG 569
           +   A++G+  +A   + +M  R      +  VG                          
Sbjct: 105 LSMFAKSGRLADARGVFAEMPERDAVSWTVMVVG-------------------------- 138

Query: 570 IKPGPDHYACMIDLLGRSGKLIEA-KALLDQMVG--EPDATVWKALLSACRVHGDLELGE 626
                         L R+G+  EA K LLD       P       +LS+C V     +G 
Sbjct: 139 --------------LNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGR 184

Query: 627 RAANNLFELEPMNAMPYVQ-LSNMYSTAGKWEDAARVRKLMKSRGI 671
           +  + + +L   + +P    + NMY   G  E A+ V + M  R +
Sbjct: 185 KVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFERMPVRSV 230


>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
           pumila]
          Length = 710

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 266/640 (41%), Positives = 382/640 (59%), Gaps = 33/640 (5%)

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
           W TM  G++ +     A++ +  M   G+  N +TFP +L +CA   A   G Q+HG +L
Sbjct: 71  WNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVL 130

Query: 263 SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE------------------------- 297
             GF+ ++Y+ ++LI MY + G L+ A+++ + S                          
Sbjct: 131 KFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHK 190

Query: 298 ------IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID 351
                 + + VSWN+ I G+A  G +KEAL LFKKM   +++ D+ T  +VL+  A +  
Sbjct: 191 MFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGS 250

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
           +   + VHS I   GF     + NALID+Y+K G L+ A  +F  + +KDVISW +LI G
Sbjct: 251 IELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGG 310

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK--SGGC 469
             +   Y+EAL  F DM  SG  P+ V + SILSACA L  ++ G+ +H    K   G  
Sbjct: 311 YTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVT 370

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
           ++ S+  SL+ +YAKCG I  A +VFDSM  R + +W A+I G A +G+   A   + +M
Sbjct: 371 NASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRM 430

Query: 530 LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGK 589
              G +PD ITFVGLL ACSH+G+ +  R  F SM + Y + P  +HY CMIDL G SG 
Sbjct: 431 RKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGL 490

Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNM 649
             EA+ +++ M  EPD  +W +LL AC++HG++ELGE  A NL ++EP N   YV LSN+
Sbjct: 491 FKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNI 550

Query: 650 YSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEI 709
           Y+TA +W + A+ R L+  +G++K PGCS +E +S VH FI  D+ HP   +IY  ++E+
Sbjct: 551 YATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEM 610

Query: 710 MLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVC 769
            +L++EAG+VPD +  L  +EEE KE  L +HSEKLA+AFGL++   G  + I KNLRVC
Sbjct: 611 EVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVC 670

Query: 770 GDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            +CH A K IS +Y R II RD  RFHHF+ G CSC DYW
Sbjct: 671 RNCHEATKLISKIYKREIIARDRTRFHHFRDGECSCNDYW 710



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 145/520 (27%), Positives = 241/520 (46%), Gaps = 65/520 (12%)

Query: 86  AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL 145
           A  +F+         W+++  G++     + A +L+  M   G  P+ YT   +L+ C+ 
Sbjct: 56  AISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAK 115

Query: 146 KGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA------------------ 187
               + G+Q HG  +K  FDL+ ++ T L+ MY +   + +A                  
Sbjct: 116 SXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTAL 175

Query: 188 ----------EYLFKMFPD--GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
                     E   KMF +   K+ V+W   I+GY++ G   +A+E F+ M    V  ++
Sbjct: 176 ITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDE 235

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            T  ++L+ACA   + + G QVH  I   GF  N+ + +ALID+Y+KCG+L++A  L + 
Sbjct: 236 STMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQG 295

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               + +SWN++I G+     +KEAL LF+ M     K +D T  S+L+  A    ++  
Sbjct: 296 LSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIG 355

Query: 356 KSVHSLIVK--TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
           + +H  I K   G      +  +LIDMYAK G+++ A  VF+ M ++ + SW ++I G A
Sbjct: 356 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFA 415

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
            HG    A   FS MR +GI PD +    +LSAC+   +L+ G+ +           S++
Sbjct: 416 MHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIF---------RSMT 466

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
            D  L+      GC+ D                         +G  KEA +  + M    
Sbjct: 467 RDYKLMPKLEHYGCMIDLX---------------------GHSGLFKEAEKMINTM---E 502

Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPG 573
            +PD + +  LL AC   G  E    Y +++ K+    PG
Sbjct: 503 MEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPG 542



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 134/445 (30%), Positives = 224/445 (50%), Gaps = 21/445 (4%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +  +G +++A ++ +K S RD  ++  +I  YA+ G +  A K+F+E P K+  +W++ I
Sbjct: 148 YVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXI 207

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            GY+  G   EA ELF +M     RP + T+  VL  C+  G ++ G Q H +     F 
Sbjct: 208 SGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFG 267

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            N  +V  L+D+Y+KC  +  A  LF+   + K+ ++W T+I GY+      +A+  F+D
Sbjct: 268 XNLKIVNALIDLYSKCGELETACGLFQGLSN-KDVISWNTLIGGYTHMNLYKEALLLFQD 326

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS--SGFEANVYVQSALIDMYAKC 283
           M   G + N  T  SIL+ACA + A D G  +H  I     G      ++++LIDMYAKC
Sbjct: 327 MLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKC 386

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
           GD+++A+++ +     +  SWN+MI GFA  G    A  +F +M    I+ DD T+  +L
Sbjct: 387 GDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLL 446

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN-----ALIDMYAKQGNLDCAFMVFNLMQ 398
           +  + +  L+  +     I ++    YK +        +ID+    G    A  + N M+
Sbjct: 447 SACSHSGMLDLGRH----IFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTME 502

Query: 399 -DKDVISWTSLITGCAYHGSYEEALKYFSDM-RISGICPDHVVVSSILSACAELTVLEFG 456
            + D + W SL+  C  HG+ E    Y  ++ +I    P   V+ S + A AE       
Sbjct: 503 MEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAER--WNEV 560

Query: 457 QQVHAVFLKSG-----GCSSLSVDN 476
            +  A+    G     GCSS+ +D+
Sbjct: 561 AKTRALLNDKGMKKVPGCSSIEIDS 585



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 128/296 (43%), Gaps = 36/296 (12%)

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDC---AFMVFNLMQDKDVISWTSL 408
           L + + +H+ ++KTG     +  + L++      + D    A  VF+ +Q+  ++ W ++
Sbjct: 15  LQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTM 74

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
             G A       ALK +  M   G+ P+      +L +CA+    + GQQ+H   LK G 
Sbjct: 75  FRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGF 134

Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIM----------------- 511
              L +  SL+ +Y + G + DA +V D    RDV+++TALI                  
Sbjct: 135 DLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDE 194

Query: 512 --------------GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENA 557
                         G A+ G  KEAL+ + +M+    +PD  T V +L AC+ +G  E  
Sbjct: 195 IPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELG 254

Query: 558 RWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
           R     ++  +G          +IDL  + G+L  A  L  Q +   D   W  L+
Sbjct: 255 RQVHSWIND-HGFGXNLKIVNALIDLYSKCGELETACGLF-QGLSNKDVISWNTLI 308



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 134/326 (41%), Gaps = 44/326 (13%)

Query: 33  VKPASDLNRALVDFSNSGEIDEAGQLFEKMSD--------------------------RD 66
           VK     N  +  ++ +G   EA +LF+KM                            R 
Sbjct: 197 VKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQ 256

Query: 67  GFTW-------------NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGL 113
             +W             N +I  Y+  G L  A  LF     K+  +W++LI GY++  L
Sbjct: 257 VHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNL 316

Query: 114 DIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLN--AFVV 171
             EA  LF  M   G +P+  T+ ++L  C+  G +  G   H Y  K    +   + + 
Sbjct: 317 YKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 376

Query: 172 TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV 231
           T L+DMYAKC  I  A+ +F    + ++  +W  MI G++ +G    A + F  MR  G+
Sbjct: 377 TSLIDMYAKCGDIEAAQQVFDSMLN-RSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGI 435

Query: 232 ESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSAR 290
           E +  TF  +L+AC+     D G  +   +         +     +ID+    G    A 
Sbjct: 436 EPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAE 495

Query: 291 RLLEYSEIDNE-VSWNSMIVGFARQG 315
           +++   E++ + V W S++      G
Sbjct: 496 KMINTMEMEPDGVIWCSLLKACKMHG 521


>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
 gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
          Length = 801

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 288/795 (36%), Positives = 439/795 (55%), Gaps = 29/795 (3%)

Query: 42  ALVDFSNS----GEIDEAGQLFEKMSDRD----GFTWNTMIAAYANSGRLREAKKLFNET 93
           AL+   N+    G +    ++  ++SDRD        N +I+ Y+  G L +AK+ F+  
Sbjct: 9   ALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRL 68

Query: 94  PF---KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRP-SQYTLDNVLRLCSLKGLL 149
           P    ++  TW+++I  +   G   EA +LF  M  +G  P +  T  +VL  C   GLL
Sbjct: 69  PRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLL 128

Query: 150 --QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTT-- 205
             +     HG  +    +  AFV T LVD Y K   + +A  +F    D +   +  T  
Sbjct: 129 SLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCS 188

Query: 206 -MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV--HGCIL 262
            MI+   QNG+  +++  F  M +EG + +  T  S+L AC+ +      A V      +
Sbjct: 189 AMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEV 248

Query: 263 SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
            S    NV + + L+  YA+  DL  AR   +  +  + VSWN+M   + +    +EAL 
Sbjct: 249 VSATRDNV-LGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALV 307

Query: 323 LFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNA--KSVHSLIVKTGFEGYKFVNNALID 379
           LF++M    ++    T+ + L  C A      +A  K + SL+ + G EG   V NA ++
Sbjct: 308 LFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLN 367

Query: 380 MYAKQGNLDCAFMVFNLMQD--KDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC-PD 436
           MYAK G+L  A  VF  +    +D I+W S++    +HG  +EA + F  M    +  P+
Sbjct: 368 MYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPN 427

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFD 496
            V   ++L A    T +  G+++HA  + +G  S   + N+L+ +YAKCG ++DA  +FD
Sbjct: 428 KVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFD 487

Query: 497 --SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
             S +  DVI WT+L+ G AQ G+ + AL+ +  M  +G +P++ITF+  L AC+H G  
Sbjct: 488 KSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKL 547

Query: 555 ENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
           E        M   +GI P   H++C++DLLGR G+L EA+ LL++   + D   W ALL 
Sbjct: 548 EQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLER-TSQADVITWMALLD 606

Query: 615 ACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
           AC+   +LE GER A  + +L+P  A  Y+ L++MY+ AG+W +AA +RK M  +GIR +
Sbjct: 607 ACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRAD 666

Query: 675 PGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGK 734
           PGCS VE N ++H F + D+ HP   +IY +++ +   IK AGYV D    LH+V +E K
Sbjct: 667 PGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHK 726

Query: 735 EIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNR 794
           E  L  HSEKLA+AFGL++ P G+P+R+ KNLRVC DCHTA K IS V  R I++RDS+R
Sbjct: 727 ERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSR 786

Query: 795 FHHFKAGNCSCGDYW 809
           +HHF +G CSCGDYW
Sbjct: 787 YHHFTSGTCSCGDYW 801



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 147/533 (27%), Positives = 250/533 (46%), Gaps = 27/533 (5%)

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           RP+ + L  ++  CS  G L  G + H       F+ N+ +   L+ MY+KC  + +A+ 
Sbjct: 4   RPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQ 63

Query: 190 LFKMFPDG--KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV-ESNQFTFPSILTACA 246
            F   P    ++ V W  MI+ + +NG   +A++ FRDM  +G    N  TF S+L +C 
Sbjct: 64  AFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCV 123

Query: 247 A---VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE-- 301
               +S  D  A +HG I+ +G E   +V++AL+D Y K G LD A  +    + D E  
Sbjct: 124 EAGLLSLEDVRA-IHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVF-LRKSDEEPS 181

Query: 302 ---VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKS 357
              V+ ++MI    + G+ +E+L LF  M+    K    T  SVLN C    +    A  
Sbjct: 182 TSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFV 241

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           +   +          +   L+  YA+  +L  A   F+ +Q  DV+SW ++      H  
Sbjct: 242 LEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHR 301

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACA---ELTVLEFGQQVHAVFLKSGGCSSLSV 474
             EAL  F  M + G+ P      + L+ACA     T    G+++ ++  ++G     +V
Sbjct: 302 PREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAV 361

Query: 475 DNSLVLVYAKCGCINDANRVFD--SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA- 531
            N+ + +YAKCG + DA  VF+  S   RD ITW +++     +G GKEA + +  M A 
Sbjct: 362 ANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAE 421

Query: 532 RGTKPDYITFVGLLFA-CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKL 590
           +  KP+ +TFV +L A  S   +A+    +   +    G +        ++++  + G L
Sbjct: 422 KLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSN--GFESDTVIQNALLNMYAKCGSL 479

Query: 591 IEAKALLDQMVG-EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
            +A+A+ D+    + D   W +L++    +G     ERA    + ++     P
Sbjct: 480 DDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQ---AERALKLFWTMQQQGVRP 529



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 131/434 (30%), Positives = 220/434 (50%), Gaps = 30/434 (6%)

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           V  N     +++ AC+ +     G ++H  I    FE N  + +ALI MY+KCG L  A+
Sbjct: 3   VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAK 62

Query: 291 ----RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM-HARDIKIDDFTYPSVLN- 344
               RL   S+ D  V+WN+MI  F R G  +EAL LF+ M H      +  T+ SVL+ 
Sbjct: 63  QAFDRLPRASKRD-VVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDS 121

Query: 345 CF-ASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD-- 401
           C  A  + L + +++H  IV  G E   FV  AL+D Y K G+LD A+ VF    D++  
Sbjct: 122 CVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPS 181

Query: 402 --VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
             +++ +++I+ C  +G  +E+L+ F  M + G  P  V + S+L+AC+ L V   G   
Sbjct: 182 TSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPV---GSAT 238

Query: 460 HAVFLKSGGCSSLSVDN----SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
             V  ++    S + DN    +L+  YA+   ++ A   FD++ + DV++W A+     Q
Sbjct: 239 AFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQ 298

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACS--HAGLAENARWYFESMDKVYGIKPG 573
           + + +EAL  +++ML  G +P   TF+  L AC+      A       +S+ +  G++  
Sbjct: 299 HHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGD 358

Query: 574 PDHYACMIDLLGRSGKLIEAKALLDQMV-GEPDATVWKALLSACRVHGDLELGERAANNL 632
                  +++  + G L +A+A+ +++     D   W ++L+A   HG   LG+ A    
Sbjct: 359 TAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHG---LGKEA---- 411

Query: 633 FEL-EPMNAMPYVQ 645
           FEL + M A   V+
Sbjct: 412 FELFQAMEAEKLVK 425


>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
 gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 698

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 284/698 (40%), Positives = 412/698 (59%), Gaps = 12/698 (1%)

Query: 121 FWQMQLEGYRP------SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT-CFDLNAFVVTG 173
           +W  +L  +RP      +   L ++L+ C   G L+RG   H   + +     + F+   
Sbjct: 4   YWGQRL--WRPPAPDAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANH 61

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
           L+ MY+ C  +  A  LF   P  +N V+WTT+++G SQN     A+  F  MR  GV  
Sbjct: 62  LITMYSHCADLASALRLFAAMPR-RNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAP 120

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
            +F   S   A AA+ A   GAQ+H   +  GF+  ++V S L DMY+KCG L  A R+ 
Sbjct: 121 TRFALSSAARAAAALGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVF 180

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNIDL 352
           +     + V+W +MI G+A+ G  + A+  F+ M     +  D   + SVL+      D 
Sbjct: 181 DQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDG 240

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITG 411
             +KS+H  + K GFE    V NALIDMYAK  +++ A  V  +     +V+S TS+I G
Sbjct: 241 WLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDG 300

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
                  EEAL  + ++R  G+ P+    SS++  CA   +LE G Q+HA  +K+     
Sbjct: 301 YIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRD 360

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
             V ++LV +Y KCG I+ + ++F+ +  R  I W A+I   AQ+G G+EA+Q +D+M+ 
Sbjct: 361 SFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIY 420

Query: 532 RGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLI 591
            G +P++I FV LL ACSHAGL +    YF SM + +GI+P  +HY+C+ID  GR+G+L 
Sbjct: 421 SGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLD 480

Query: 592 EAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYS 651
           EA   + +M  +P+A  W +LL ACR+ G  ELGE AA NL +LEP N   +V LS +Y+
Sbjct: 481 EAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYA 540

Query: 652 TAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIML 711
           + G+WED   VRKLM+   I+K PG SWV++N + H+F SED  HP + DIY K++E+  
Sbjct: 541 SLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTT 600

Query: 712 LIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGD 771
            IKE GY+PD +F   N+E+  KE  L YHSE++AVAF L+++P   PI + KNLR+C D
Sbjct: 601 RIKEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICID 660

Query: 772 CHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           CHTA K+I  V  R II+RD++RFHHF  G CSCGDYW
Sbjct: 661 CHTAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 698



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 143/457 (31%), Positives = 238/457 (52%), Gaps = 11/457 (2%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N +I  Y++   L  A +LF   P +N  +W++L+ G S   +  +A   F  M+  
Sbjct: 57  FLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRA 116

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G  P+++ L +  R  +  G    G Q H   ++  FD   FV + L DMY+KC  + EA
Sbjct: 117 GVAPTRFALSSAARAAAALGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEA 176

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACA 246
             +F   P  K+ VAWT MI GY++NG    A+  FRDM+ EG V ++Q  F S+L+A  
Sbjct: 177 CRVFDQMPQ-KDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASG 235

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID----NEV 302
            +        +H C+  +GFE  V V++ALIDMYAK  D++SA R+L   +ID    N V
Sbjct: 236 GLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVL---KIDPGGWNVV 292

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           S  SMI G+      +EAL ++ ++  + ++ ++FT+ S++   A    L     +H+ +
Sbjct: 293 SGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQV 352

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           +KT      FV + L+DMY K G +  +  +FN ++ +  I+W ++I   A HG   EA+
Sbjct: 353 IKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAI 412

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL-V 481
           + F  M  SGI P+H+   S+L+AC+   +++ G +      ++ G        S ++  
Sbjct: 413 QAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDT 472

Query: 482 YAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNG 517
           Y + G +++A +    M  + +   W +L+  C   G
Sbjct: 473 YGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRG 509



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 183/362 (50%), Gaps = 9/362 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D + F  + +   Y+  G L EA ++F++ P K+   W+++I GY+  G    A   F  
Sbjct: 154 DTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRD 213

Query: 124 MQLEGYRPS-QYTLDNVLRLCSLKGLLQRG---EQFHGYAIKTCFDLNAFVVTGLVDMYA 179
           M+ EG   + Q+   +VL   S  G L+ G   +  H    K  F+L   V   L+DMYA
Sbjct: 214 MKREGLVGADQHVFCSVL---SASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYA 270

Query: 180 KCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFP 239
           K   +  A  + K+ P G N V+ T+MI GY +     +A+  + ++R +GVE N+FTF 
Sbjct: 271 KSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFS 330

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
           S++  CA  +  + GAQ+H  ++ +    + +V S L+DMY KCG +  + +L    E  
Sbjct: 331 SMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYR 390

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSV 358
            +++WN++I  FA+ G  +EA+  F +M    I+ +   + S+L  C  + +     K  
Sbjct: 391 TDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYF 450

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGS 417
           +S+    G E  +   + +ID Y + G LD A+   + M  K +   W SL+  C   GS
Sbjct: 451 YSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGS 510

Query: 418 YE 419
            E
Sbjct: 511 KE 512



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 6/119 (5%)

Query: 43  LVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK----N 97
           LVD +   G I  + QLF ++  R    WN +I  +A  G  REA + F+   +     N
Sbjct: 367 LVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPN 426

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
              + SL+   S+ GL  E  + F+ M +  G  P +     ++      G L    +F
Sbjct: 427 HIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKF 485


>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 267/731 (36%), Positives = 421/731 (57%), Gaps = 4/731 (0%)

Query: 81  GRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQYTLDNV 139
           G +   ++LFN+    + F ++ LI G+S+ GL   +  L+  + +    RP  +T    
Sbjct: 60  GAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFA 119

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKN 199
           +   S     + G   H ++I      N FV + +VD+Y K      A  +F + P+ ++
Sbjct: 120 ISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPE-RD 178

Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG 259
            V W TMI+G+S+N Y   +I  F DM   G+  +  T  ++LTA A +     G  +  
Sbjct: 179 TVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQC 238

Query: 260 CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKE 319
                G  ++VYV + LI +Y+KCG     R L +  +  + +S+N+MI G+      + 
Sbjct: 239 LASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETES 298

Query: 320 ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALID 379
           A++LF+++ A   +++  T   ++  +     L  ++ + +L +K G      V+ AL  
Sbjct: 299 AVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTT 358

Query: 380 MYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVV 439
           +Y +   +  A  +F+   +K + SW ++I+G   +G  + A+  F +M +  + P+ V 
Sbjct: 359 VYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSPNPVT 417

Query: 440 VSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH 499
           V+SILSACA+L  L  G+ VH +       S++ V  +LV +YAKCG I +A ++FD M 
Sbjct: 418 VTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMV 477

Query: 500 TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW 559
            ++V+TW A+I G   +G GKEAL+ + +ML  G  P  +TF+ +L+ACSH+GL      
Sbjct: 478 DKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNE 537

Query: 560 YFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVH 619
            F SM   YG +P  +HYACM+D+LGR+G+L  A   +++M  EP   VW ALL AC +H
Sbjct: 538 IFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIH 597

Query: 620 GDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSW 679
            + E+   A+  LF+L+P N   YV LSN+YST   +  AA VR+++K R + K PGC+ 
Sbjct: 598 KNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTL 657

Query: 680 VETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPD-MNFALHNVEEEGKEIGL 738
           +E + Q ++F S DR HP  T I+  ++++   ++EAGY  + +  ALH+VE+E KE+ +
Sbjct: 658 IEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMV 717

Query: 739 AYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHF 798
             HSEKLA+AFGL++   G  IRI KNLRVC DCHTA K+IS +  R I++RD+NRFHHF
Sbjct: 718 NVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHF 777

Query: 799 KAGNCSCGDYW 809
           K G CSCGDYW
Sbjct: 778 KNGICSCGDYW 788



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 130/470 (27%), Positives = 217/470 (46%), Gaps = 9/470 (1%)

Query: 51  EIDEAGQLFEKMSDRDG-----FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           E +  G L    S  DG     F  + ++  Y    R   A+K+F+  P ++   W+++I
Sbjct: 127 EDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMI 186

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            G+S      ++  +F  M   G      TL  VL   +     + G      A K    
Sbjct: 187 SGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLH 246

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            + +V+TGL+ +Y+KC    +   LF    D  + +++  MI+GY+ N     A+  FR+
Sbjct: 247 SDVYVLTGLISLYSKCGKSCKGRILFDQI-DQPDLISYNAMISGYTFNHETESAVTLFRE 305

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           +   G   N  T   ++      +       +    L  G      V +AL  +Y +  +
Sbjct: 306 LLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNE 365

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           +  AR+L + S   +  SWN+MI G+ + G    A+SLF++M  + +  +  T  S+L+ 
Sbjct: 366 VQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSA 424

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
            A    L+  K VH LI     E   +V+ AL+DMYAK G++  A  +F+LM DK+V++W
Sbjct: 425 CAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTW 484

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
            ++ITG   HG  +EALK F +M  SGI P  V   SIL AC+   ++  G ++      
Sbjct: 485 NAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMAN 544

Query: 466 SGGCSSLSVDNS-LVLVYAKCGCINDANRVFDSMHTRD-VITWTALIMGC 513
           + G   +S   + +V +  + G + +A    + M        W AL+  C
Sbjct: 545 NYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGAC 594



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 198/419 (47%), Gaps = 12/419 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +    +I+ Y+  G+  + + LF++    +  +++++I GY+       A  LF ++ 
Sbjct: 248 DVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELL 307

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G R +  TL  ++ +      LQ        ++K    L   V T L  +Y +   + 
Sbjct: 308 ASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQ 367

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A  LF   P+ K+  +W  MI+GY+QNG   +AI  F++M  + +  N  T  SIL+AC
Sbjct: 368 FARQLFDESPE-KSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSAC 425

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A + A   G  VHG I S   E+NVYV +AL+DMYAKCG +  AR+L +     N V+WN
Sbjct: 426 AQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWN 485

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVK 364
           +MI G+   G  KEAL LF +M    I     T+ S+L  C  S +     +  HS+   
Sbjct: 486 AMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANN 545

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALK 423
            GF+        ++D+  + G L  A      M  +     W +L+  C  H + E A  
Sbjct: 546 YGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMA-- 603

Query: 424 YFSDMRISGICPD----HVVVSSILSACAELTVLEFGQQV--HAVFLKSGGCSSLSVDN 476
             +  R+  + P+    +V++S+I S           +QV       K+ GC+ + +D+
Sbjct: 604 NVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDD 662



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 8/116 (6%)

Query: 24  RYTHNVGNSVKPASDL--NRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANS 80
           ++ H +  S +  S++  + ALVD ++  G I EA QLF+ M D++  TWN MI  Y   
Sbjct: 435 KWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLH 494

Query: 81  GRLREAKKLFNETPFKNF----FTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRP 131
           G  +EA KLF E           T+ S++Y  S+ GL  E  E+F  M    G++P
Sbjct: 495 GHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQP 550


>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 267/731 (36%), Positives = 422/731 (57%), Gaps = 4/731 (0%)

Query: 81  GRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNV 139
           G +   ++LFN+    + F ++ LI G+S+ GL   +  L+  ++ +   RP  +T    
Sbjct: 60  GAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFA 119

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKN 199
           +   S     + G   H ++I      N FV + +VD+Y K      A  +F + P+ ++
Sbjct: 120 ISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPE-RD 178

Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG 259
            V W TMI+G+S+N Y   +I  F DM   G+  +  T  ++LTA A +     G  +  
Sbjct: 179 TVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQC 238

Query: 260 CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKE 319
                G  ++VYV + LI +Y+KCG     R L +  +  + +S+N+MI G+      + 
Sbjct: 239 LASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETES 298

Query: 320 ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALID 379
           A++LF+++ A   +++  T   ++  +     L  ++ + +L +K G      V+ AL  
Sbjct: 299 AVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTT 358

Query: 380 MYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVV 439
           +Y +   +  A  +F+   +K + SW ++I+G   +G  + A+  F +M +  + P+ V 
Sbjct: 359 VYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSPNPVT 417

Query: 440 VSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH 499
           V+SILSACA+L  L  G+ VH +       S++ V  +LV +YAKCG I +A ++FD M 
Sbjct: 418 VTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMV 477

Query: 500 TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW 559
            ++V+TW A+I G   +G GKEAL+ + +ML  G  P  +TF+ +L+ACSH+GL      
Sbjct: 478 DKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNE 537

Query: 560 YFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVH 619
            F SM   YG +P  +HYACM+D+LGR+G+L  A   +++M  EP   VW ALL AC +H
Sbjct: 538 IFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIH 597

Query: 620 GDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSW 679
            + E+   A+  LF+L+P N   YV LSN+YST   +  AA VR+++K R + K PGC+ 
Sbjct: 598 KNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTL 657

Query: 680 VETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPD-MNFALHNVEEEGKEIGL 738
           +E + Q ++F S DR HP  T I+  ++++   ++EAGY  + +  ALH+VE+E KE+ +
Sbjct: 658 IEIDDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMV 717

Query: 739 AYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHF 798
             HSEKLA+AFGL++   G  IRI KNLRVC DCHTA K+IS +  R I++RD+NRFHHF
Sbjct: 718 NVHSEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHF 777

Query: 799 KAGNCSCGDYW 809
           K G CSCGDYW
Sbjct: 778 KNGICSCGDYW 788



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 130/470 (27%), Positives = 217/470 (46%), Gaps = 9/470 (1%)

Query: 51  EIDEAGQLFEKMSDRDG-----FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           E +  G L    S  DG     F  + ++  Y    R   A+K+F+  P ++   W+++I
Sbjct: 127 EDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMI 186

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            G+S      ++  +F  M   G      TL  VL   +     + G      A K    
Sbjct: 187 SGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLH 246

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            + +V+TGL+ +Y+KC    +   LF    D  + +++  MI+GY+ N     A+  FR+
Sbjct: 247 SDVYVLTGLISLYSKCGKSCKGRILFDQI-DQPDLISYNAMISGYTFNHETESAVTLFRE 305

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           +   G   N  T   ++      +       +    L  G      V +AL  +Y +  +
Sbjct: 306 LLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNE 365

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           +  AR+L + S   +  SWN+MI G+ + G    A+SLF++M  + +  +  T  S+L+ 
Sbjct: 366 VQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSA 424

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
            A    L+  K VH LI     E   +V+ AL+DMYAK G++  A  +F+LM DK+V++W
Sbjct: 425 CAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTW 484

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
            ++ITG   HG  +EALK F +M  SGI P  V   SIL AC+   ++  G ++      
Sbjct: 485 NAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMAN 544

Query: 466 SGGCSSLSVDNS-LVLVYAKCGCINDANRVFDSMHTRD-VITWTALIMGC 513
           + G   +S   + +V +  + G + +A    + M        W AL+  C
Sbjct: 545 NYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGAC 594



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 198/419 (47%), Gaps = 12/419 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +    +I+ Y+  G+  + + LF++    +  +++++I GY+       A  LF ++ 
Sbjct: 248 DVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELL 307

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G R +  TL  ++ +      LQ        ++K    L   V T L  +Y +   + 
Sbjct: 308 ASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQ 367

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A  LF   P+ K+  +W  MI+GY+QNG   +AI  F++M  + +  N  T  SIL+AC
Sbjct: 368 FARQLFDESPE-KSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSAC 425

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A + A   G  VHG I S   E+NVYV +AL+DMYAKCG +  AR+L +     N V+WN
Sbjct: 426 AQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWN 485

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVK 364
           +MI G+   G  KEAL LF +M    I     T+ S+L  C  S +     +  HS+   
Sbjct: 486 AMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANN 545

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALK 423
            GF+        ++D+  + G L  A      M  +     W +L+  C  H + E A  
Sbjct: 546 YGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMA-- 603

Query: 424 YFSDMRISGICPD----HVVVSSILSACAELTVLEFGQQV--HAVFLKSGGCSSLSVDN 476
             +  R+  + P+    +V++S+I S           +QV       K+ GC+ + +D+
Sbjct: 604 NVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDD 662



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 8/116 (6%)

Query: 24  RYTHNVGNSVKPASDL--NRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANS 80
           ++ H +  S +  S++  + ALVD ++  G I EA QLF+ M D++  TWN MI  Y   
Sbjct: 435 KWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLH 494

Query: 81  GRLREAKKLFNETPFKNF----FTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRP 131
           G  +EA KLF E           T+ S++Y  S+ GL  E  E+F  M    G++P
Sbjct: 495 GHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQP 550


>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
 gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
          Length = 935

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 288/795 (36%), Positives = 439/795 (55%), Gaps = 29/795 (3%)

Query: 42  ALVDFSNS----GEIDEAGQLFEKMSDRD----GFTWNTMIAAYANSGRLREAKKLFNET 93
           AL+   N+    G +    ++  ++SDRD        N +I+ Y+  G L +AK+ F+  
Sbjct: 143 ALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRL 202

Query: 94  PF---KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRP-SQYTLDNVLRLCSLKGLL 149
           P    ++  TW+++I  +   G   EA +LF  M  +G  P +  T  +VL  C   GLL
Sbjct: 203 PRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLL 262

Query: 150 --QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTT-- 205
             +     HG  +    +  AFV T LVD Y K   + +A  +F    D +   +  T  
Sbjct: 263 SLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCS 322

Query: 206 -MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV--HGCIL 262
            MI+   QNG+  +++  F  M +EG + +  T  S+L AC+ +      A V      +
Sbjct: 323 AMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEV 382

Query: 263 SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
            S    NV + + L+  YA+  DL  AR   +  +  + VSWN+M   + +    +EAL 
Sbjct: 383 VSATRDNV-LGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALV 441

Query: 323 LFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNA--KSVHSLIVKTGFEGYKFVNNALID 379
           LF++M    ++    T+ + L  C A      +A  K + SL+ + G EG   V NA ++
Sbjct: 442 LFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLN 501

Query: 380 MYAKQGNLDCAFMVFNLMQD--KDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC-PD 436
           MYAK G+L  A  VF  +    +D I+W S++    +HG  +EA + F  M    +  P+
Sbjct: 502 MYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPN 561

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFD 496
            V   ++L A    T +  G+++HA  + +G  S   + N+L+ +YAKCG ++DA  +FD
Sbjct: 562 KVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFD 621

Query: 497 --SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
             S +  DVI WT+LI G AQ G+ + AL+ +  M  +G +P+++TF+  L AC+H G  
Sbjct: 622 KSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHGGKL 681

Query: 555 ENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
           E        M   +GI P   H++C++DLLGR G+L EA+ LL++   + D   W ALL 
Sbjct: 682 EQGCELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLER-TSQADVITWMALLD 740

Query: 615 ACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
           AC+   +LE GER A  + +L+P  A  Y+ L++MY+ AG+W +AA +RK M  +GIR +
Sbjct: 741 ACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRAD 800

Query: 675 PGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGK 734
           PGCS VE N ++H F + D+ HP   +IY +++ +   IK AGYV D    LH+V +E K
Sbjct: 801 PGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHK 860

Query: 735 EIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNR 794
           E  L  HSEKLA+AFGL++ P G+P+R+ KNLRVC DCHTA K IS V  R I++RDS+R
Sbjct: 861 ERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSR 920

Query: 795 FHHFKAGNCSCGDYW 809
           +HHF +G CSCGDYW
Sbjct: 921 YHHFTSGTCSCGDYW 935



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 163/595 (27%), Positives = 283/595 (47%), Gaps = 32/595 (5%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  + +I  +A  G L EA+ L +   F + ++ +++I  +  +G   +A ELF +M++ 
Sbjct: 81  FLASDLIVMHAKCGNLAEAEALADR--FASVYSCTAMIRAWMEHGRPDKAMELFDRMEV- 137

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
             RP+ + L  ++  CS  G L  G + H       F+ N+ +   L+ MY+KC  + +A
Sbjct: 138 --RPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDA 195

Query: 188 EYLFKMFPDG--KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV-ESNQFTFPSILTA 244
           +  F   P    ++ V W  MI+ + +NG   +A++ FRDM  +G    N  TF S+L +
Sbjct: 196 KQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDS 255

Query: 245 CAA---VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           C     +S  D  A +HG I+ +G E   +V++AL+D Y K G LD A  +    + D E
Sbjct: 256 CVEAGLLSLEDVRA-IHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVF-LRKGDEE 313

Query: 302 -----VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNA 355
                V+ ++MI    + G+ +E+L LF  M+    K    T  SVLN C    +    A
Sbjct: 314 PSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATA 373

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
             +   +          +   L+  YA+  +L  A   F+ +Q  DV+SW ++      H
Sbjct: 374 FVLEQAMEVVSATRDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQH 433

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACA---ELTVLEFGQQVHAVFLKSGGCSSL 472
               EAL  F  M + G+ P      + L+ACA     T    G+++ ++  ++G     
Sbjct: 434 HRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDT 493

Query: 473 SVDNSLVLVYAKCGCINDANRVFD--SMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
           +V N+ + +YAKCG + DA  VF+  S   RD ITW +++     +G GKEA + +  M 
Sbjct: 494 AVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAME 553

Query: 531 A-RGTKPDYITFVGLLFA-CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSG 588
           A +  KP+ +TFV +L A  S   +A+    +   +    G +        ++++  + G
Sbjct: 554 AEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSN--GFESDTVIQNALLNMYAKCG 611

Query: 589 KLIEAKALLDQMVG-EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
            L +A+A+ D+    + D   W +L++    +G     ERA    + ++     P
Sbjct: 612 SLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQ---AERALKLFWTMQQQGVRP 663



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 161/537 (29%), Positives = 272/537 (50%), Gaps = 42/537 (7%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLN--AFVVTGLVDMYAKCKCIFEAE 188
           PS Y    +L+ C     L++G++ H + +    DL+  +F+ + L+ M+AKC  + EAE
Sbjct: 43  PSTYGC--LLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAE 100

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
            L   F    +  + T MI  + ++G   KA+E F  M V     N     +++ AC+ +
Sbjct: 101 ALADRFA---SVYSCTAMIRAWMEHGRPDKAMELFDRMEVR---PNCHALIALVNACSCL 154

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR----RLLEYSEIDNEVSW 304
                G ++H  I    FE N  + +ALI MY+KCG L  A+    RL   S+ D  V+W
Sbjct: 155 GNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRD-VVTW 213

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARD--IKIDDFTYPSVLN-CF-ASNIDLNNAKSVHS 360
           N+MI  F R G  +EAL LF+ M  RD     +  T+ SVL+ C  A  + L + +++H 
Sbjct: 214 NAMISAFLRNGSAREALQLFRDMD-RDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHG 272

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD----VISWTSLITGCAYHG 416
            IV  G E   FV  AL+D Y K G+LD A+ VF    D++    +++ +++I+ C  +G
Sbjct: 273 RIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNG 332

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
             +E+L+ F  M + G  P  V + S+L+AC   ++L+ G     V  ++    S + DN
Sbjct: 333 WPQESLRLFFAMNLEGTKPSGVTLVSVLNAC---SMLQVGSATAFVLEQAMEVVSATRDN 389

Query: 477 ----SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
               +L+  YA+   +  A   FD++ + DV++W A+     Q+ + +EAL  +++ML  
Sbjct: 390 VLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLE 449

Query: 533 GTKPDYITFVGLLFACS--HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKL 590
           G +P   TF+  L AC+      A       +S+ +  G++         +++  + G L
Sbjct: 450 GVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSL 509

Query: 591 IEAKALLDQMV-GEPDATVWKALLSACRVHGDLELGERAANNLFEL-EPMNAMPYVQ 645
            +A+A+ +++     D   W ++L+A   HG   LG+ A    FEL + M A   V+
Sbjct: 510 ADARAVFERISPARRDCITWNSMLAAYGHHG---LGKEA----FELFQAMEAEKLVK 559


>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 242/591 (40%), Positives = 382/591 (64%), Gaps = 2/591 (0%)

Query: 221  ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
            E   +M ++G+E     + S+LT C + +A   G +VH  ++ + +E  VY+++ LI +Y
Sbjct: 463  EALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLY 522

Query: 281  AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
             KC  L  ARR+L+     N VSW +MI G++++G+  EAL LF +M       ++FT+ 
Sbjct: 523  NKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFA 582

Query: 341  SVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
            +VL    S+      + +HSL++KT FE + FV ++L+DMYAK G +  A  VF+ + ++
Sbjct: 583  TVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPER 642

Query: 401  DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
            DV+S T++I+G A  G  EEAL  F  ++  G+  ++V  +S+L+A + L  L+ G+QVH
Sbjct: 643  DVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVH 702

Query: 461  AVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGK 520
            +  L++     + + NSL+ +Y+KCG +  + R+FDSM  R VI+W A+++G +++G G+
Sbjct: 703  SHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGR 762

Query: 521  EALQFYDQMLARG-TKPDYITFVGLLFACSHAGLAENA-RWYFESMDKVYGIKPGPDHYA 578
            EA++ +  M      KPD +TF+ +L  CSH G+ +     ++E +++  G +P  +HY 
Sbjct: 763  EAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYG 822

Query: 579  CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM 638
            C++DL GR+G++ EA   + +M  EP A +W +LL ACRVH ++ +GE  A  L E+E  
Sbjct: 823  CVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESE 882

Query: 639  NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPL 698
            NA  YV LSN+Y++AG+W+D   VR+LMK + + KEPG SW+E +  +H F + DR HP 
Sbjct: 883  NAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPR 942

Query: 699  RTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA 758
            + ++++K+ E+ + IKEAGYVP+++  L++V++E KE  L  HSEKLA+AFGL+  P G 
Sbjct: 943  KEEVFAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGT 1002

Query: 759  PIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            P+RI KNLR+C DCH   K++S VY R + LRD NRFHH   G CSCGDYW
Sbjct: 1003 PVRIIKNLRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 1053



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 122/399 (30%), Positives = 220/399 (55%), Gaps = 5/399 (1%)

Query: 119 ELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMY 178
           E   +M ++G        D+VL  C  +  ++ G++ H + IKTC++   ++ T L+ +Y
Sbjct: 463 EALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLY 522

Query: 179 AKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTF 238
            KC+C+ +A  +    P+ +N V+WT MI+GYSQ GY  +A+  F +M + G   N+FTF
Sbjct: 523 NKCRCLGDARRVLDEMPE-RNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTF 581

Query: 239 PSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI 298
            ++LT+C + S    G Q+H  ++ + FE++++V S+L+DMYAK G +  ARR+ +    
Sbjct: 582 ATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPE 641

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
            + VS  ++I G+A+ G  +EAL LF+++    ++ +  TY SVL   +    L++ + V
Sbjct: 642 RDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQV 701

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           HS +++     Y  + N+LIDMY+K G+L  +  +F+ M ++ VISW +++ G + HG  
Sbjct: 702 HSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLG 761

Query: 419 EEALKYFSDMRISG-ICPDHVVVSSILSACAELTVLEFGQQV--HAVFLKSGGCSSLSVD 475
            EA++ F  M+    + PD V   ++LS C+   + + G ++    V  K G    +   
Sbjct: 762 REAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHY 821

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVIT-WTALIMGC 513
             +V ++ + G + +A      M        W +L+  C
Sbjct: 822 GCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGAC 860



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 194/347 (55%), Gaps = 5/347 (1%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +I  Y     L +A+++ +E P +N  +W+++I GYS  G   EA  LF +M + G  P+
Sbjct: 518 LIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPN 577

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
           ++T   VL  C+     Q G Q H   IKT F+ + FV + L+DMYAK   I EA  +F 
Sbjct: 578 EFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFD 637

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
             P+ ++ V+ T +I+GY+Q G   +A++ FR ++ EG+ SN  T+ S+LTA + ++A D
Sbjct: 638 GLPE-RDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALD 696

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G QVH  +L +     V +Q++LIDMY+KCG L  +RR+ +       +SWN+M+VG++
Sbjct: 697 HGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYS 756

Query: 313 RQGFHKEALSLFKKMHARD-IKIDDFTYPSVLN-CFASNIDLNNAKSVHSLI-VKTGFEG 369
           + G  +EA+ LFK M   + +K D  T+ +VL+ C    ++    +  + ++  K GFE 
Sbjct: 757 KHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEP 816

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYH 415
                  ++D++ + G ++ AF     M  +     W SL+  C  H
Sbjct: 817 EIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVH 863



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 133/245 (54%), Gaps = 5/245 (2%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  ++++  YA +G++ EA+++F+  P ++  + +++I GY+  GLD EA +LF ++Q E
Sbjct: 614 FVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQRE 673

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G R +  T  +VL   S    L  G Q H + ++        +   L+DMY+KC  +  +
Sbjct: 674 GMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYS 733

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACA 246
             +F   P+ +  ++W  M+ GYS++G G +A+E F+ M+ E  V+ +  TF ++L+ C+
Sbjct: 734 RRIFDSMPE-RTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCS 792

Query: 247 AVSARDFGAQVHGCILSS--GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS- 303
                D G ++   +++   GFE  +     ++D++ + G ++ A   ++    +   + 
Sbjct: 793 HGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAI 852

Query: 304 WNSMI 308
           W S++
Sbjct: 853 WGSLL 857



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 63/125 (50%), Gaps = 8/125 (6%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           L  +L+D +S  G +  + ++F+ M +R   +WN M+  Y+  G  REA +LF     +N
Sbjct: 716 LQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEEN 775

Query: 98  -----FFTWSSLIYGYSNYGLDIEAFELFWQM--QLEGYRPSQYTLDNVLRLCSLKGLLQ 150
                  T+ +++ G S+ G++    E+F++M  Q +G+ P       V+ L    G ++
Sbjct: 776 KVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVE 835

Query: 151 RGEQF 155
              +F
Sbjct: 836 EAFEF 840


>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 265/658 (40%), Positives = 382/658 (58%), Gaps = 37/658 (5%)

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM--RVEGVESNQFTFPSILTA 244
           A  LF   P   N   W T+I  Y+ +   F++   F D+  + E +  N+FTFP ++ A
Sbjct: 78  ARNLFDQIPQ-PNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDL-PNKFTFPFVIKA 135

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
            + + A   G  VHG  +   F  ++Y+ ++L+  Y  CGDL  A RL +     + VSW
Sbjct: 136 ASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSW 195

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           NSMI  FA+    ++AL LF KM   ++  +  T   VL+  A  +DL   + V S I +
Sbjct: 196 NSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIER 255

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE----- 419
            G +    + NA++DMY K G++D A  +F+ M ++DV SWT ++ G A  G Y+     
Sbjct: 256 KGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLV 315

Query: 420 --------------------------EALKYFSDMRISGIC-PDHVVVSSILSACAELTV 452
                                     EAL  F+++++S I  PD V + S LSACA+L  
Sbjct: 316 FNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGA 375

Query: 453 LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMG 512
           ++ G  +H    + G   +  + +SLV +YAKCG +  A  VF S+  RDV  W+A+I G
Sbjct: 376 IDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAG 435

Query: 513 CAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKP 572
              +G+GK A+  + +M     KP+ +TF  +L ACSHAGL +  R +F  M+ VYG+ P
Sbjct: 436 LGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVP 495

Query: 573 GPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNL 632
              HYACM+D+LGR+G L EA  L+++M   P A+VW ALL AC +H ++ELGE A++ L
Sbjct: 496 EMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQL 555

Query: 633 FELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISE 692
            +LEP N    V LSN+Y+  G+WE  + +RKLM+   ++KEPGCS +E N  VH F+  
Sbjct: 556 LKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVG 615

Query: 693 DRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEG-KEIGLAYHSEKLAVAFGL 751
           D  HPL ++IYSK++EI   +K  GY P+ +  L  +EE+  KE  L+ HSEKLA+AFGL
Sbjct: 616 DNTHPLSSNIYSKLEEIATKLKSVGYEPNKSHLLQLIEEDDLKEQALSLHSEKLAIAFGL 675

Query: 752 LTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +TL    PIR+ KNLR+CGDCH   K +S VY R I+LRD  RFHHF+ G+CSC DYW
Sbjct: 676 VTLAPSQPIRVVKNLRICGDCHAFAKLVSRVYDRDILLRDRYRFHHFRDGHCSCMDYW 733



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 132/496 (26%), Positives = 237/496 (47%), Gaps = 42/496 (8%)

Query: 55  AGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLD 114
            G  F+  S    FT     +A ++   L  A+ LF++ P  N +TW++LI  Y++    
Sbjct: 51  TGLFFDPFSASKLFT----ASALSSFSTLDYARNLFDQIPQPNLYTWNTLIRAYASSSDP 106

Query: 115 IEAFELFWQM--QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVT 172
            ++F +F  +  + E   P+++T   V++  S     + G   HG AIK  F ++ +++ 
Sbjct: 107 FQSFVIFLDLLDKCEDL-PNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILN 165

Query: 173 GLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
            LV  Y  C  +  AE LFK     K+ V+W +MI+ ++Q      A+E F  M  E V 
Sbjct: 166 SLVRFYGACGDLSMAERLFKGI-SCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVM 224

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
            N  T   +L+ACA     +FG  V   I   G + ++ + +A++DMY KCG +D A++L
Sbjct: 225 PNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKL 284

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFH-------------------------------KEAL 321
            +     +  SW  M+ G+A+ G +                               KEAL
Sbjct: 285 FDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEAL 344

Query: 322 SLFKKMHARDI-KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDM 380
           ++F ++    I K D+ T  S L+  A    ++    +H  I + G      + ++L+DM
Sbjct: 345 AIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDM 404

Query: 381 YAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVV 440
           YAK G+L+ A  VF  ++++DV  W+++I G   HG  + A+  F +M+ + + P+ V  
Sbjct: 405 YAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTF 464

Query: 441 SSILSACAELTVLEFGQQ-VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH 499
           +++L AC+   +++ G+   H +    G    +     +V +  + G + +A  + + M 
Sbjct: 465 TNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMS 524

Query: 500 TRDVIT-WTALIMGCA 514
           T    + W AL+  C+
Sbjct: 525 TTPSASVWGALLGACS 540



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 138/280 (49%), Gaps = 5/280 (1%)

Query: 33  VKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN 91
           +K    L  A++D ++  G +D+A +LF++M +RD F+W  M+  YA  G    A+ +FN
Sbjct: 258 IKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFN 317

Query: 92  ETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGY-RPSQYTLDNVLRLCSLKGLLQ 150
             P K    W+ LI  Y   G   EA  +F ++QL    +P + TL + L  C+  G + 
Sbjct: 318 AMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAID 377

Query: 151 RGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
            G   H Y  +    LN  +++ LVDMYAKC  + +A  +F    +   +V W+ MI G 
Sbjct: 378 LGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYV-WSAMIAGL 436

Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ-VHGCILSSGFEAN 269
             +G G  AI+ F +M+   V+ N  TF ++L AC+     D G    H      G    
Sbjct: 437 GMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPE 496

Query: 270 VYVQSALIDMYAKCGDLDSARRLL-EYSEIDNEVSWNSMI 308
           +   + ++D+  + G L+ A  L+ E S   +   W +++
Sbjct: 497 MKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALL 536


>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 264/628 (42%), Positives = 371/628 (59%), Gaps = 9/628 (1%)

Query: 191  FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
            F  + D  N  +W ++I   ++ G   +A+  F  +R  G+   + +FP  + +C+A+  
Sbjct: 1971 FYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCD 2030

Query: 251  RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
               G   H      GFE +++V SALIDMY+KCG L  AR L +   + N VSW SMI G
Sbjct: 2031 LVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITG 2090

Query: 311  FARQGFHKEALSLFKKM--------HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
            + +      AL LFK             ++ +D     SVL+  +        + VH  +
Sbjct: 2091 YVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFV 2150

Query: 363  VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
            VK GF+G   V N L+D YAK G    +  VF+ M++KD ISW S+I   A  G   EAL
Sbjct: 2151 VKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEAL 2210

Query: 423  KYFSDM-RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
            + F  M R  G+  + V +S++L ACA    L  G+ +H   +K     ++ V  S++ +
Sbjct: 2211 EVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDM 2270

Query: 482  YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
            Y KCG +  A + FD M  ++V +WTA++ G   +G+ KEAL  + +M+  G KP+YITF
Sbjct: 2271 YCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITF 2330

Query: 542  VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
            V +L ACSHAGL E    +F +M   Y I+PG +HY CM+DL GR+G L EA  L+ +M 
Sbjct: 2331 VSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMK 2390

Query: 602  GEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
             +PD  VW +LL ACR+H +++LGE AA  LFEL+P N   YV LSN+Y+ AG+W D  R
Sbjct: 2391 MKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVER 2450

Query: 662  VRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPD 721
            +R LMK+R + K PG S VE   +VH+F+  D+ HP    IY  ++++ L +++ GYVP+
Sbjct: 2451 MRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPN 2510

Query: 722  MNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISA 781
            M   LH+V+EE KEI L  HSEKLAVAFG++    G  I I KNLRVCGDCHT +K IS 
Sbjct: 2511 MTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISK 2570

Query: 782  VYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            +  R  ++RDS RFHHFK G CSCGDYW
Sbjct: 2571 LVHRDFVVRDSKRFHHFKDGVCSCGDYW 2598



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 140/470 (29%), Positives = 235/470 (50%), Gaps = 32/470 (6%)

Query: 66   DGFTWNTMIAAYANSGRLRE---AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFW 122
            DG T+N+++     SGR      A   +      N  +W+S+I   +  G  +EA   F 
Sbjct: 1946 DGITYNSILFGVP-SGREDHSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFS 2004

Query: 123  QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
             ++  G  P++ +    ++ CS    L  G   H  A    F+ + FV + L+DMY+KC 
Sbjct: 2005 SLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCG 2064

Query: 183  CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES--------N 234
             + +A  LF   P  +N V+WT+MITGY QN     A+  F+D   E  E         +
Sbjct: 2065 QLKDARALFDEIP-LRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLD 2123

Query: 235  QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
                 S+L+AC+ VS +     VHG ++  GF+ ++ V + L+D YAKCG    ++++ +
Sbjct: 2124 SVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFD 2183

Query: 295  YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM-HARDIKIDDFTYPSVLNCFASNIDLN 353
            + E  +++SWNSMI  +A+ G   EAL +F  M     ++ +  T  +VL   A    L 
Sbjct: 2184 WMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALR 2243

Query: 354  NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
              K +H  ++K   E    V  ++IDMY K G ++ A   F+ M++K+V SWT+++ G  
Sbjct: 2244 AGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYG 2303

Query: 414  YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLE-----FGQQVHAVFLKSG- 467
             HG  +EAL  F  M  +G+ P+++   S+L+AC+   ++E     F    H   ++ G 
Sbjct: 2304 MHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGI 2363

Query: 468  ---GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
               GC        +V ++ + GC+N+A  +   M  + D + W +L+  C
Sbjct: 2364 EHYGC--------MVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGAC 2405



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 120/371 (32%), Positives = 186/371 (50%), Gaps = 35/371 (9%)

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE--VSWNSMIVGFAR 313
           Q+H  I+ SG   +  +   LI +Y+  G +  A  +L + +I N    +WN +I     
Sbjct: 45  QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRI--AYAILLFYQIQNPCTFTWNLIIRANTI 102

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
            G  ++AL L+K M  + I  D FT+P V+    + + ++  K VH  ++K GF G  FV
Sbjct: 103 NGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFV 162

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY--------------- 418
            N LID Y K G+   A  VF  M+ ++V+SWT++I+G    G                 
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNV 222

Query: 419 ----------------EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAV 462
                           EEAL+ F  M+   I P+   + S++ AC E+ +L  G+ +H  
Sbjct: 223 VSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDY 282

Query: 463 FLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEA 522
            +K+     + +  +L+ +Y+KCG I DA  VF++M  + + TW ++I     +G G+EA
Sbjct: 283 AIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEA 342

Query: 523 LQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMID 582
           L  + +M     KPD ITF+G+L AC H    +    YF  M + YGI P P+HY CM +
Sbjct: 343 LNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTE 402

Query: 583 LLGRSGKLIEA 593
           L  RS  L EA
Sbjct: 403 LYARSNNLDEA 413



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 185/369 (50%), Gaps = 24/369 (6%)

Query: 64   DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY-SNYGLD--IEAFEL 120
            + D F  + +I  Y+  G+L++A+ LF+E P +N  +W+S+I GY  N   D  +  F+ 
Sbjct: 2047 ETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKD 2106

Query: 121  FWQMQLEGYRPSQYTLD-----NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
            F + + E    +   LD     +VL  CS        E  HG+ +K  FD +  V   L+
Sbjct: 2107 FLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLM 2166

Query: 176  DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESN 234
            D YAKC     ++ +F    + K+ ++W +MI  Y+Q+G   +A+E F  M R  GV  N
Sbjct: 2167 DAYAKCGQPLVSKKVFDWMEE-KDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYN 2225

Query: 235  QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
              T  ++L ACA   A   G  +H  ++    E NV V +++IDMY KCG ++ A++  +
Sbjct: 2226 AVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFD 2285

Query: 295  YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNID-- 351
              +  N  SW +M+ G+   G  KEAL +F KM    +K +  T+ SVL  C  + +   
Sbjct: 2286 RMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEE 2345

Query: 352  ----LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWT 406
                 N  K  H   ++ G E Y      ++D++ + G L+ A+ +   M+ K D + W 
Sbjct: 2346 GWHWFNAMK--HKYDIEPGIEHY----GCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWG 2399

Query: 407  SLITGCAYH 415
            SL+  C  H
Sbjct: 2400 SLLGACRIH 2408



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 157/334 (47%), Gaps = 32/334 (9%)

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQN 213
           Q H   I++    +  +   L+ +Y+    I  A  LF    +      W  +I   + N
Sbjct: 45  QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCT-FTWNLIIRANTIN 103

Query: 214 GYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
           G   +A+  +++M  +G+ +++FTFP ++ AC    + D G  VHG ++  GF  +V+VQ
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 274 SALIDMYAK-------------------------------CGDLDSARRLLEYSEIDNEV 302
           + LID Y K                               CGDL  ARR+ +     N V
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SW +MI G+ R    +EAL LFK+M A +I  +++T  S++        L   + +H   
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYA 283

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           +K   E   ++  ALIDMY+K G++  A  VF  M  K + +W S+IT    HG  +EAL
Sbjct: 284 IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEAL 343

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
             FS+M    + PD +    +L AC  +  ++ G
Sbjct: 344 NLFSEMERVNVKPDAITFIGVLCACVHIKNVKEG 377



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 135/249 (54%), Gaps = 3/249 (1%)

Query: 43  LVDFS-NSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTW 101
           L+DF    G    A ++FEKM  R+  +W T+I+   + G L+EA+++F+E P KN  +W
Sbjct: 166 LIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSW 225

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIK 161
           +++I GY       EA ELF +MQ E   P++YT+ ++++ C+  G+L  G   H YAIK
Sbjct: 226 TAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIK 285

Query: 162 TCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIE 221
            C ++  ++ T L+DMY+KC  I +A  +F+  P  K+   W +MIT    +G G +A+ 
Sbjct: 286 NCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPR-KSLPTWNSMITSLGVHGLGQEALN 344

Query: 222 CFRDMRVEGVESNQFTFPSILTACAAV-SARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
            F +M    V+ +  TF  +L AC  + + ++  A         G          + ++Y
Sbjct: 345 LFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELY 404

Query: 281 AKCGDLDSA 289
           A+  +LD A
Sbjct: 405 ARSNNLDEA 413



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 178/412 (43%), Gaps = 49/412 (11%)

Query: 25  YTHNVGNS----VKPASDL--NRALVDFSNSGEIDEAGQLFEKMS----DRDGFTWNTMI 74
           YTH+V  S    + P  ++   +AL    N        Q+  K+       D      +I
Sbjct: 7   YTHDVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLI 66

Query: 75  AAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQY 134
             Y+  GR+  A  LF +      FTW+ +I   +  GL  +A  L+  M  +G    ++
Sbjct: 67  HLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKF 126

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC------------- 181
           T   V++ C+    +  G+  HG  IK  F  + FV   L+D Y KC             
Sbjct: 127 TFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKM 186

Query: 182 ----------------KC--IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
                            C  + EA  +F   P  KN V+WT MI GY +N    +A+E F
Sbjct: 187 RVRNVVSWTTVISGLISCGDLQEARRIFDEIP-SKNVVSWTAMINGYIRNQQPEEALELF 245

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
           + M+ E +  N++T  S++ AC  +     G  +H   + +  E  VY+ +ALIDMY+KC
Sbjct: 246 KRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKC 305

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
           G +  A  + E     +  +WNSMI      G  +EAL+LF +M   ++K D  T+  VL
Sbjct: 306 GSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVL 365

Query: 344 NCFASNIDLNNAKSVHSLIVKT----GFEGYKFVNNALIDMYAKQGNLDCAF 391
               + + + N K   +   +     G          + ++YA+  NLD AF
Sbjct: 366 ---CACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAF 414



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 146/323 (45%), Gaps = 36/323 (11%)

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           +  + + +H+ I+++G    + +   LI +Y+  G +  A ++F  +Q+    +W  +I 
Sbjct: 39  NFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIR 98

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
               +G  E+AL  + +M   GI  D      ++ AC     ++ G+ VH   +K G   
Sbjct: 99  ANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSG 158

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRD---------------------------- 502
            + V N+L+  Y KCG    A +VF+ M  R+                            
Sbjct: 159 DVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIP 218

Query: 503 ---VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW 559
              V++WTA+I G  +N + +EAL+ + +M A    P+  T V L+ AC+  G+    R 
Sbjct: 219 SKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRG 278

Query: 560 YFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVH 619
             +   K   I+ G      +ID+  + G + +A  + + M  +   T W +++++  VH
Sbjct: 279 IHDYAIK-NCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPT-WNSMITSLGVH 336

Query: 620 GDLELGERAANNLFELEPMNAMP 642
           G   LG+ A N   E+E +N  P
Sbjct: 337 G---LGQEALNLFSEMERVNVKP 356



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 112/247 (45%), Gaps = 20/247 (8%)

Query: 382  AKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVS 441
             ++ + + A   +  +   +V SW S+I   A  G   EAL+ FS +R  G+ P      
Sbjct: 1960 GREDHSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFP 2019

Query: 442  SILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR 501
              + +C+ L  L  G+  H      G  + L V ++L+ +Y+KCG + DA  +FD +  R
Sbjct: 2020 CTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLR 2079

Query: 502  DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP--------DYITFVGLLFACSHA-- 551
            +V++WT++I G  QN +   AL  +   L   T+         D +  V +L ACS    
Sbjct: 2080 NVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSG 2139

Query: 552  -GLAENARWYF--ESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
             G+ E    +   +  D   G+         ++D   + G+ + +K + D M  E D   
Sbjct: 2140 KGITEGVHGFVVKKGFDGSIGVG------NTLMDAYAKCGQPLVSKKVFDWM-EEKDDIS 2192

Query: 609  WKALLSA 615
            W ++++ 
Sbjct: 2193 WNSMIAV 2199



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 92/215 (42%), Gaps = 5/215 (2%)

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
           +Q+HA  ++SG  +   +   L+ +Y+  G I  A  +F  +      TW  +I     N
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 517 GKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH 576
           G  ++AL  Y  M+ +G   D  TF  ++ AC++    +  +    S+ K YG       
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIK-YGFSGDVFV 162

Query: 577 YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELE 636
              +ID   + G    A  + ++M    +   W  ++S     GDL+   R  +   E+ 
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKMRVR-NVVSWTTVISGLISCGDLQEARRIFD---EIP 218

Query: 637 PMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
             N + +  + N Y    + E+A  + K M++  I
Sbjct: 219 SKNVVSWTAMINGYIRNQQPEEALELFKRMQAENI 253



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 36/161 (22%)

Query: 50   GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS 109
            G ++ A + F++M +++  +W  M+A Y   GR +                         
Sbjct: 2275 GRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAK------------------------- 2309

Query: 110  NYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGY-AIKTCFDLNA 168
                  EA ++F++M   G +P+  T  +VL  CS  GL++ G  +H + A+K  +D+  
Sbjct: 2310 ------EALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEG--WHWFNAMKHKYDIEP 2361

Query: 169  FV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
             +     +VD++ +  C+ EA  L K      + V W +++
Sbjct: 2362 GIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLL 2402


>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
          Length = 698

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 269/692 (38%), Positives = 398/692 (57%), Gaps = 14/692 (2%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+ YT    L+ CS       G   H +AI      + FV T L+DMY KC C+ +A ++
Sbjct: 8   PNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHI 67

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE--GVESNQFTFPSILTACAAV 248
           F   P  ++ VAW  M+ GY+ +G    A+     M+++   +  N  T  ++L   A  
Sbjct: 68  FATMP-ARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQ 126

Query: 249 SARDFGAQVHGCILSSGFEAN----------VYVQSALIDMYAKCGDLDSARRLLEYSEI 298
            A   G  VH   + +    N          V + +AL+DMYAKCG L  ARR+ +    
Sbjct: 127 GALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPA 186

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK-IDDFTYPSVLNCFASNIDLNNAKS 357
            NEV+W+++I GF       +A  LFK M A+ +  +   +  S L   AS   L   + 
Sbjct: 187 RNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQ 246

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           +H+L+ K+G        N+L+ MYAK G +D A  +F+ M  KD +S+++L++G   +G 
Sbjct: 247 LHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGR 306

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
            EEA   F  M+   + PD   + S++ AC+ L  L+ G+  H   +  G  S  S+ N+
Sbjct: 307 AEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNA 366

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
           L+ +YAKCG I+ + +VF+ M +RD+++W  +I G   +G GKEA   + +M   G  PD
Sbjct: 367 LIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPD 426

Query: 538 YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALL 597
            +TF+ LL ACSH+GL    + +F  M   YG+ P  +HY CM+DLL R G L EA   +
Sbjct: 427 GVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFI 486

Query: 598 DQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWE 657
             M    D  VW ALL ACRV+ +++LG++ +  + EL P     +V LSN+YS AG+++
Sbjct: 487 QSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFD 546

Query: 658 DAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAG 717
           +AA VR + K +G +K PGCSW+E N  +H F+  D+ HP   +IY ++D I++ IK+ G
Sbjct: 547 EAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLG 606

Query: 718 YVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMK 777
           Y PD +F L ++EEE KE  L  HSEKLA+A+G+L+L +   I + KNLRVCGDCHT +K
Sbjct: 607 YQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIK 666

Query: 778 YISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +IS V  R II+RD+NRFHHFK G CSCGD+W
Sbjct: 667 HISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 698



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 153/527 (29%), Positives = 250/527 (47%), Gaps = 24/527 (4%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFE--LFWQ 123
           D F    ++  Y     L +A  +F   P ++   W++++ GY+++G+   A    L  Q
Sbjct: 44  DLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQ 103

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLN----------AFVVTG 173
           MQ+   RP+  TL  +L L + +G L +G   H Y I+ C   N            + T 
Sbjct: 104 MQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTA 163

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV-E 232
           L+DMYAKC  +  A  +F   P  +N V W+ +I G+       +A   F+ M  +G+  
Sbjct: 164 LLDMYAKCGSLLYARRVFDAMP-ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCF 222

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
            +  +  S L ACA++     G Q+H  +  SG  A++   ++L+ MYAK G +D A  L
Sbjct: 223 LSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIAL 282

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
            +   + + VS+++++ G+ + G  +EA  +FKKM A +++ D  T  S++   +    L
Sbjct: 283 FDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAAL 342

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
            + +  H  ++  G      + NALIDMYAK G +D +  VFN+M  +D++SW ++I G 
Sbjct: 343 QHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGY 402

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL-TVLEFGQQVHAVFLKSGGCSS 471
             HG  +EA   F +M   G  PD V    +LSAC+    V+E     H +    G    
Sbjct: 403 GIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPR 462

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGK---GKEALQFYD 527
           +     +V + ++ G +++A     SM  R DV  W AL+  C        GK+  +   
Sbjct: 463 MEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQ 522

Query: 528 QMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
           ++   GT      FV L    S AG  + A      + KV G K  P
Sbjct: 523 ELGPEGTG----NFVLLSNIYSAAGRFDEAA-EVRIIQKVQGFKKSP 564



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 128/441 (29%), Positives = 221/441 (50%), Gaps = 22/441 (4%)

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           V  N +TFP  L AC+A++    G  +H   + +G +A+++V +AL+DMY KC  L  A 
Sbjct: 6   VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALS--LFKKMHARDIKIDDFTYPSVLNCFAS 348
            +       + V+WN+M+ G+A  G +  A++  L  +M    ++ +  T  ++L   A 
Sbjct: 66  HIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQ 125

Query: 349 NIDLNNAKSVHSLIVKTGFEGYK----------FVNNALIDMYAKQGNLDCAFMVFNLMQ 398
              L    SVH+  ++      +           +  AL+DMYAK G+L  A  VF+ M 
Sbjct: 126 QGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMP 185

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC-PDHVVVSSILSACAELTVLEFGQ 457
            ++ ++W++LI G        +A   F  M   G+C      ++S L ACA L  L  G+
Sbjct: 186 ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGE 245

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
           Q+HA+  KSG  + L+  NSL+ +YAK G I+ A  +FD M  +D ++++AL+ G  QNG
Sbjct: 246 QLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNG 305

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY 577
           + +EA   + +M A   +PD  T V L+ ACSH    ++ R    S+  + G+       
Sbjct: 306 RAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSV-IIRGLASETSIC 364

Query: 578 ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELE- 636
             +ID+  + G++  ++ + + M    D   W  +++   +HG   LG+ A     E+  
Sbjct: 365 NALIDMYAKCGRIDLSRQVFNMMPSR-DIVSWNTMIAGYGIHG---LGKEATALFLEMNN 420

Query: 637 ---PMNAMPYVQLSNMYSTAG 654
              P + + ++ L +  S +G
Sbjct: 421 LGFPPDGVTFICLLSACSHSG 441



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 128/424 (30%), Positives = 207/424 (48%), Gaps = 15/424 (3%)

Query: 66  DGFTWNT-MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           DG    T ++  YA  G L  A+++F+  P +N  TWS+LI G+       +AF LF  M
Sbjct: 156 DGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAM 215

Query: 125 QLEGY-RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
             +G    S  ++ + LR C+    L+ GEQ H    K+    +      L+ MYAK   
Sbjct: 216 LAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGL 275

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I +A  LF      K+ V+++ +++GY QNG   +A   F+ M+   VE +  T  S++ 
Sbjct: 276 IDQAIALFDEMAV-KDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIP 334

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC+ ++A   G   HG ++  G  +   + +ALIDMYAKCG +D +R++       + VS
Sbjct: 335 ACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVS 394

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLI 362
           WN+MI G+   G  KEA +LF +M+      D  T+  +L+ C  S + +      H + 
Sbjct: 395 WNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMG 454

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGSYEEA 421
              G          ++D+ ++ G LD A+     M  + DV  W +L+  C  + + +  
Sbjct: 455 HGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLG 514

Query: 422 LKYFSDMRISGICPD----HVVVSSILSACA---ELTVLEFGQQVHAVFLKSGGCSSLSV 474
            K  S M I  + P+     V++S+I SA     E   +   Q+V   F KS GCS + +
Sbjct: 515 -KKVSRM-IQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQG-FKKSPGCSWIEI 571

Query: 475 DNSL 478
           + SL
Sbjct: 572 NGSL 575



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 56/125 (44%), Gaps = 6/125 (4%)

Query: 37  SDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF 95
           + +  AL+D ++  G ID + Q+F  M  RD  +WNTMIA Y   G  +EA  LF E   
Sbjct: 361 TSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNN 420

Query: 96  KNF----FTWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQYTLDNVLRLCSLKGLLQ 150
             F     T+  L+   S+ GL IE    F  M    G  P       ++ L S  G L 
Sbjct: 421 LGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLD 480

Query: 151 RGEQF 155
              +F
Sbjct: 481 EAYEF 485


>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
 gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 760

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 256/729 (35%), Positives = 409/729 (56%), Gaps = 71/729 (9%)

Query: 151 RGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
           +  Q H   +K+    + ++   L+  Y+   C  +A+ + +  PD   + +++++I   
Sbjct: 33  KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIY-SFSSLIYAL 91

Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV 270
           ++     ++I  F  M   G+  +    P++   CA +SA   G Q+H     SG + + 
Sbjct: 92  TKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDA 151

Query: 271 YVQSALIDMYAKCGDLDSARRL----------------------------------LEYS 296
           +VQ ++  MY +CG +  AR++                                  +E S
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211

Query: 297 EID-NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
            I+ N VSWN ++ GF R G+HKEA+ +F+K+H      D  T  SVL     +  LN  
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL---------------------------- 387
           + +H  ++K G    K V +A+IDMY K G++                            
Sbjct: 272 RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331

Query: 388 ---DCAFMVFNLMQDK----DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVV 440
              D A  +F L +++    +V+SWTS+I GCA +G   EAL+ F +M+++G+ P+HV +
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391

Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT 500
            S+L AC  +  L  G+  H   ++     ++ V ++L+ +YAKCG IN +  VF+ M T
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT 451

Query: 501 RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWY 560
           ++++ W +L+ G + +GK KE +  ++ ++    KPD+I+F  LL AC   GL +    Y
Sbjct: 452 KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKY 511

Query: 561 FESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
           F+ M + YGIKP  +HY+CM++LLGR+GKL EA  L+ +M  EPD+ VW ALL++CR+  
Sbjct: 512 FKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQN 571

Query: 621 DLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWV 680
           +++L E AA  LF LEP N   YV LSN+Y+  G W +   +R  M+S G++K PGCSW+
Sbjct: 572 NVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWI 631

Query: 681 ETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAY 740
           +  ++V+  ++ D+ HP    I  K+DEI   ++++G+ P+++FALH+VEE+ +E  L  
Sbjct: 632 QVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWG 691

Query: 741 HSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKA 800
           HSEKLAV FGLL  P G P+++ KNLR+CGDCH  +K+IS+   R I +RD+NRFHHFK 
Sbjct: 692 HSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKD 751

Query: 801 GNCSCGDYW 809
           G CSCGD+W
Sbjct: 752 GICSCGDFW 760



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 129/529 (24%), Positives = 232/529 (43%), Gaps = 71/529 (13%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            ++ +  +  DG+    +IA+Y+N     +A  +    P    +++SSLIY  +   L  
Sbjct: 39  ARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFT 98

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           ++  +F +M   G  P  + L N+ ++C+     + G+Q H  +  +  D++AFV   + 
Sbjct: 99  QSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMF 158

Query: 176 DMYAKCKCIFEAEYLFKMFPDG----------------------------------KNHV 201
            MY +C  + +A  +F    D                                    N V
Sbjct: 159 HMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIV 218

Query: 202 AWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI 261
           +W  +++G++++GY  +A+  F+ +   G   +Q T  S+L +       + G  +HG +
Sbjct: 219 SWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYV 278

Query: 262 LSSGFEANVYVQSALIDMYAKCGD-------------------------------LDSAR 290
           +  G   +  V SA+IDMY K G                                +D A 
Sbjct: 279 IKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKAL 338

Query: 291 RLLEYSEID----NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCF 346
            + E  +      N VSW S+I G A+ G   EAL LF++M    +K +  T PS+L   
Sbjct: 339 EMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPAC 398

Query: 347 ASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWT 406
            +   L + +S H   V+        V +ALIDMYAK G ++ + +VFN+M  K+++ W 
Sbjct: 399 GNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWN 458

Query: 407 SLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
           SL+ G + HG  +E +  F  +  + + PD +  +S+LSAC ++ + + G +   +  + 
Sbjct: 459 SLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEE 518

Query: 467 GGCSS-LSVDNSLVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMGC 513
            G    L   + +V +  + G + +A  +   M    D   W AL+  C
Sbjct: 519 YGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSC 567



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 128/480 (26%), Positives = 231/480 (48%), Gaps = 48/480 (10%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK----NFFTWSSLI 105
           G + +A ++F++MSD+D  T + ++ AYA  G L E  ++ +E        N  +W+ ++
Sbjct: 165 GRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGIL 224

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            G++  G   EA  +F ++   G+ P Q T+ +VL       +L  G   HGY IK    
Sbjct: 225 SGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLL 284

Query: 166 LNAFVVTGLVDMYAKCKCIF-------------------------------EAEYLFKMF 194
            +  V++ ++DMY K   ++                               +A  +F++F
Sbjct: 285 KDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELF 344

Query: 195 PDGK---NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
            +     N V+WT++I G +QNG   +A+E FR+M+V GV+ N  T PS+L AC  ++A 
Sbjct: 345 KEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAAL 404

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
             G   HG  +      NV+V SALIDMYAKCG ++ ++ +       N V WNS++ GF
Sbjct: 405 GHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGF 464

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGY 370
           +  G  KE +S+F+ +    +K D  ++ S+L+ C    +     K    +  + G +  
Sbjct: 465 SMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPR 524

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
               + ++++  + G L  A+ +   M  + D   W +L+  C    + +  L   +  +
Sbjct: 525 LEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVD--LAEIAAEK 582

Query: 430 ISGICPD----HVVVSSILSACAELT-VLEFGQQVHAVFLKSG-GCSSLSVDNSLVLVYA 483
           +  + P+    +V++S+I +A    T V     ++ ++ LK   GCS + V N +  + A
Sbjct: 583 LFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLA 642


>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 241/586 (41%), Positives = 380/586 (64%), Gaps = 2/586 (0%)

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M ++G+E     + S+LT C + +A   G +VH  ++ + +E  VY+++ LI +Y KC  
Sbjct: 1   MGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRC 60

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           L  ARR+L+     N VSW +MI G++++G+  EAL LF +M       ++FT+ +VL  
Sbjct: 61  LGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTS 120

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
             S+      + +HSL++KT FE + FV ++L+DMYAK G +  A  VF+ + ++DV+S 
Sbjct: 121 CTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSC 180

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
           T++I+G A  G  EEAL  F  ++  G+  ++V  +S+L+A + L  L+ G+QVH+  L+
Sbjct: 181 TAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLR 240

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
           +     + + NSL+ +Y+KCG +  + R+FDSM  R VI+W A+++G +++G G+EA++ 
Sbjct: 241 AKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVEL 300

Query: 526 YDQMLARG-TKPDYITFVGLLFACSHAGLAENA-RWYFESMDKVYGIKPGPDHYACMIDL 583
           +  M      KPD +TF+ +L  CSH G+ +     ++E +++  G +P  +HY C++DL
Sbjct: 301 FKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDL 360

Query: 584 LGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPY 643
            GR+G++ EA   + +M  EP A +W +LL ACRVH ++ +GE  A  L E+E  NA  Y
Sbjct: 361 FGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNY 420

Query: 644 VQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIY 703
           V LSN+Y++AG+W+D   VR+LMK + + KEPG SW+E +  +H F + DR HP + +++
Sbjct: 421 VILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVF 480

Query: 704 SKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIF 763
           +K+ E+ + IKEAGYVP+++  L++V++E KE  L  HSEKLA+AFGL+  P G P+RI 
Sbjct: 481 AKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRII 540

Query: 764 KNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           KNLR+C DCH   K++S VY R + LRD NRFHH   G CSCGDYW
Sbjct: 541 KNLRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 586



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 220/395 (55%), Gaps = 12/395 (3%)

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           +++ +GY       D+VL  C  +  ++ G++ H + IKTC++   ++ T L+ +Y KC+
Sbjct: 7   EVEFQGY-------DSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCR 59

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
           C+ +A  +    P+ +N V+WT MI+GYSQ GY  +A+  F +M + G   N+FTF ++L
Sbjct: 60  CLGDARRVLDEMPE-RNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVL 118

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           T+C + S    G Q+H  ++ + FE++++V S+L+DMYAK G +  ARR+ +     + V
Sbjct: 119 TSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVV 178

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           S  ++I G+A+ G  +EAL LF+++    ++ +  TY SVL   +    L++ + VHS +
Sbjct: 179 SCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHV 238

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           ++     Y  + N+LIDMY+K G+L  +  +F+ M ++ VISW +++ G + HG   EA+
Sbjct: 239 LRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAV 298

Query: 423 KYFSDMRISG-ICPDHVVVSSILSACAELTVLEFGQQV--HAVFLKSGGCSSLSVDNSLV 479
           + F  M+    + PD V   ++LS C+   + + G ++    V  K G    +     +V
Sbjct: 299 ELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVV 358

Query: 480 LVYAKCGCINDANRVFDSMHTRDVIT-WTALIMGC 513
            ++ + G + +A      M        W +L+  C
Sbjct: 359 DLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGAC 393



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 194/347 (55%), Gaps = 5/347 (1%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +I  Y     L +A+++ +E P +N  +W+++I GYS  G   EA  LF +M + G  P+
Sbjct: 51  LIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPN 110

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
           ++T   VL  C+     Q G Q H   IKT F+ + FV + L+DMYAK   I EA  +F 
Sbjct: 111 EFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFD 170

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
             P+ ++ V+ T +I+GY+Q G   +A++ FR ++ EG+ SN  T+ S+LTA + ++A D
Sbjct: 171 GLPE-RDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALD 229

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G QVH  +L +     V +Q++LIDMY+KCG L  +RR+ +       +SWN+M+VG++
Sbjct: 230 HGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYS 289

Query: 313 RQGFHKEALSLFKKMHARD-IKIDDFTYPSVLN-CFASNIDLNNAKSVHSLI-VKTGFEG 369
           + G  +EA+ LFK M   + +K D  T+ +VL+ C    ++    +  + ++  K GFE 
Sbjct: 290 KHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEP 349

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYH 415
                  ++D++ + G ++ AF     M  +     W SL+  C  H
Sbjct: 350 EIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVH 396



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 170/350 (48%), Gaps = 46/350 (13%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  ++++  YA +G++ EA+++F+  P ++  + +++I GY+  GLD EA +LF ++Q E
Sbjct: 147 FVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQRE 206

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G R +  T  +VL   S    L  G Q H + ++        +   L+DMY+KC  +  +
Sbjct: 207 GMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYS 266

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACA 246
             +F   P+ +  ++W  M+ GYS++G G +A+E F+ M+ E  V+ +  TF ++L+ C+
Sbjct: 267 RRIFDSMPE-RTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCS 325

Query: 247 AVSARDFGAQVHGCILSS--GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS- 303
                D G ++   +++   GFE  +     ++D++ + G ++ A   ++    +   + 
Sbjct: 326 HGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAI 385

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           W S++ G  R             +H +++ I +F    +L      I+  NA +      
Sbjct: 386 WGSLL-GACR-------------VH-QNVHIGEFVARRLL-----EIESENAGN------ 419

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVI-----SWTSL 408
                 Y  ++N    +YA  G  D    V  LM++K VI     SW  L
Sbjct: 420 ------YVILSN----LYASAGRWDDVRTVRELMKEKAVIKEPGRSWIEL 459



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 63/125 (50%), Gaps = 8/125 (6%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           L  +L+D +S  G +  + ++F+ M +R   +WN M+  Y+  G  REA +LF     +N
Sbjct: 249 LQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEEN 308

Query: 98  -----FFTWSSLIYGYSNYGLDIEAFELFWQM--QLEGYRPSQYTLDNVLRLCSLKGLLQ 150
                  T+ +++ G S+ G++    E+F++M  Q +G+ P       V+ L    G ++
Sbjct: 309 KVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVE 368

Query: 151 RGEQF 155
              +F
Sbjct: 369 EAFEF 373


>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 260/674 (38%), Positives = 399/674 (59%), Gaps = 4/674 (0%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           GQ+       D F  N +I   + S R+  A+ +F++ P KN  TWSS++  YS  G   
Sbjct: 73  GQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSE 132

Query: 116 EAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
           EA  +F  +Q + G  P+++ L +V+R C+  G++++G Q HG+ +++ FD + +V T L
Sbjct: 133 EALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSL 192

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           +D Y+K   I EA  +F    + K  V WTT+I GY++ G    ++E F  MR   V  +
Sbjct: 193 IDFYSKNGNIEEARLVFDQLSE-KTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPD 251

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
           ++   S+L+AC+ +   + G Q+H  +L  G E +V V + LID Y KC  + + R+L +
Sbjct: 252 RYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFD 311

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
              + N +SW +MI G+ +  F  EA+ LF +M+    K D F   SVL    S   L  
Sbjct: 312 QMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQ 371

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
            + VH+  +K   E  +FV N LIDMYAK   L  A  VF++M +++VIS+ ++I G + 
Sbjct: 372 GRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSS 431

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
                EAL+ F +MR+    P+    +++++A + L  L  GQQ H   +K G      V
Sbjct: 432 QEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFV 491

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
            N+LV +YAKCG I +A ++F+S   RDV+ W ++I   AQ+G+ +EAL  + +M+  G 
Sbjct: 492 TNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGI 551

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAK 594
           +P+Y+TFV +L ACSHAG  E+   +F SM   +GIKPG +HYAC++ LLGRSGKL EAK
Sbjct: 552 QPNYVTFVAVLSACSHAGRVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAK 610

Query: 595 ALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAG 654
             +++M  EP A VW++LLSACR+ G++ELG+ AA      +P ++  Y+ LSN++++ G
Sbjct: 611 EFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKG 670

Query: 655 KWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIK 714
            W D  +VR  M S  + KEPG SW+E N++V++FI+ D  H    DI S +D ++  IK
Sbjct: 671 MWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHR-EADIGSVLDILIQHIK 729

Query: 715 EAGYVPDMNFALHN 728
            AGYVPD    L N
Sbjct: 730 GAGYVPDATALLMN 743



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 163/556 (29%), Positives = 286/556 (51%), Gaps = 9/556 (1%)

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           +Q+   RP +    N+L+L   +  +   +  HG  I +    + F+   L+++ +K   
Sbjct: 40  LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDR 99

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSIL 242
           +  A  +F   P  KN + W++M++ YSQ GY  +A+  F D+ R  G   N+F   S++
Sbjct: 100 VDNARVVFDKMPH-KNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVI 158

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
            AC  +   + GAQ+HG ++ SGF+ +VYV ++LID Y+K G+++ AR + +       V
Sbjct: 159 RACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAV 218

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           +W ++I G+ + G    +L LF +M   ++  D +   SVL+  +    L   K +H+ +
Sbjct: 219 TWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYV 278

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           ++ G E    V N LID Y K   +     +F+ M  K++ISWT++I+G   +    EA+
Sbjct: 279 LRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAM 338

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
           K F +M   G  PD    +S+L++C     LE G+QVHA  +K+   S   V N L+ +Y
Sbjct: 339 KLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMY 398

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
           AK   + DA +VFD M  ++VI++ A+I G +   K  EAL+ + +M  R  KP+  TF 
Sbjct: 399 AKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFA 458

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
            L+ A S+     + + +   + K+ G+   P     ++D+  + G + EA+ + +  + 
Sbjct: 459 ALITAASNLASLRHGQQFHNQLVKM-GLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIW 517

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFE--LEPMNAMPYVQLSNMYSTAGKWEDAA 660
             D   W +++S    HG+ E        + +  ++P N + +V + +  S AG+ ED  
Sbjct: 518 R-DVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQP-NYVTFVAVLSACSHAGRVEDGL 575

Query: 661 RVRKLMKSRGIRKEPG 676
                M   GI+  PG
Sbjct: 576 NHFNSMPGFGIK--PG 589



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 171/576 (29%), Positives = 277/576 (48%), Gaps = 88/576 (15%)

Query: 42  ALVDF-SNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           +L+DF S +G I+EA  +F+++S++   TW T+IA Y   GR                  
Sbjct: 191 SLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGR------------------ 232

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
                           + ELF QM+     P +Y + +VL  CS+   L+ G+Q H Y +
Sbjct: 233 -------------SAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVL 279

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAI 220
           +   +++  VV  L+D Y KC  +     LF      KN ++WTTMI+GY QN + ++A+
Sbjct: 280 RRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMV-VKNIISWTTMISGYMQNSFDWEAM 338

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
           + F +M   G + + F   S+LT+C +  A + G QVH   + +  E++ +V++ LIDMY
Sbjct: 339 KLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMY 398

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
           AK   L  A+++ +     N +S+N+MI G++ Q    EAL LF +M  R  K ++FT+ 
Sbjct: 399 AKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFA 458

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
           +++   ++   L + +  H+ +VK G +   FV NAL+DMYAK G+++ A  +FN    +
Sbjct: 459 ALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWR 518

Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
           DV+ W S+I+  A HG  EEAL  F +M   GI P++V   ++LSAC+           H
Sbjct: 519 DVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACS-----------H 567

Query: 461 AVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA----LIMGCAQN 516
           A                        G + D    F+SM    +   T     ++    ++
Sbjct: 568 A------------------------GRVEDGLNHFNSMPGFGIKPGTEHYACVVSLLGRS 603

Query: 517 GKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD- 575
           GK  EA +F ++M     +P  I +  LL AC  AG  E  ++  E       I   P  
Sbjct: 604 GKLFEAKEFIEKM---PIEPAAIVWRSLLSACRIAGNVELGKYAAE-----MAISTDPKD 655

Query: 576 --HYACMIDLLGRSGKLIEAKALLDQM-----VGEP 604
              Y  + ++    G   + K + D+M     V EP
Sbjct: 656 SGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEP 691



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 131/274 (47%), Gaps = 38/274 (13%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           +   L+D ++ S  + +A ++F+ M++++  ++N MI  Y++  +L EA +LF+E     
Sbjct: 390 VKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHE----- 444

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                                     M++   +P+++T   ++   S    L+ G+QFH 
Sbjct: 445 --------------------------MRVRLQKPNEFTFAALITAASNLASLRHGQQFHN 478

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG--KNHVAWTTMITGYSQNGY 215
             +K   D   FV   LVDMYAKC  I EA    KMF     ++ V W +MI+ ++Q+G 
Sbjct: 479 QLVKMGLDFCPFVTNALVDMYAKCGSIEEAR---KMFNSSIWRDVVCWNSMISTHAQHGE 535

Query: 216 GFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSA 275
             +A+  FR+M  EG++ N  TF ++L+AC+     + G      +   G +      + 
Sbjct: 536 AEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGTEHYAC 595

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDN-EVSWNSMI 308
           ++ +  + G L  A+  +E   I+   + W S++
Sbjct: 596 VVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLL 629



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 70/176 (39%), Gaps = 40/176 (22%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           +  ALVD ++  G I+EA ++F     RD   WN+MI+ +A  G   EA  +F E     
Sbjct: 491 VTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFRE----- 545

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG----E 153
                                     M  EG +P+  T   VL  CS  G ++ G     
Sbjct: 546 --------------------------MMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFN 579

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
              G+ IK   +  A VV+    +  +   +FEA+   +  P     + W ++++ 
Sbjct: 580 SMPGFGIKPGTEHYACVVS----LLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSA 631


>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
          Length = 830

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 267/707 (37%), Positives = 397/707 (56%), Gaps = 73/707 (10%)

Query: 172 TGLVDMYAKCKCIFEAEYLFKMFPDGK-NHVAWTTMITGYSQNGYGFKAIECFRDMRVEG 230
           T LV   A    + +A   F   P  + + V    M++ +++      A+  F  +   G
Sbjct: 96  TSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 155

Query: 231 -VESNQFTFPSILTACAAVS--ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC---- 283
            +  + ++F ++++A   +   A     Q+H  +L SG  A + V +ALI +Y KC    
Sbjct: 156 SLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPE 215

Query: 284 ------------------------------GDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
                                         GD+++AR + E  +   +V WN+MI G+ +
Sbjct: 216 ASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQ 275

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK--TGF--EG 369
            G   +A  LF++M +  + +D+FT+ SVL+  A+     + KSVH  I++    F  E 
Sbjct: 276 SGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEA 335

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTS---------------------- 407
              VNNAL+ +Y+K G +  A  +F+ M  KDV+SW +                      
Sbjct: 336 ALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMP 395

Query: 408 ---------LITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
                    +++G  + G  E+ALK F+ MR   + P     +  ++AC EL  L+ G+Q
Sbjct: 396 YKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQ 455

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK 518
           +HA  ++ G  +S S  N+L+ +YAKCG +NDA  VF  M   D ++W A+I    Q+G 
Sbjct: 456 LHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGH 515

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA 578
           G+EAL+ +DQM+A G  PD I+F+ +L AC+HAGL +    YFESM + +GI PG DHYA
Sbjct: 516 GREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYA 575

Query: 579 CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM 638
            +IDLLGRSG++ EA+ L+  M  EP  ++W+A+LS CR +GD+E G  AA+ LF + P 
Sbjct: 576 RLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQ 635

Query: 639 NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPL 698
           +   Y+ LSN YS AG+W DAARVRKLM+ RG++KEPGCSW+E  S++H+F+  D  HP 
Sbjct: 636 HDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPE 695

Query: 699 RTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA 758
             ++Y  ++ I   +++ GYVPD  F LH++E   KE  L  HSEKLAV FGLL LP GA
Sbjct: 696 AQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGA 755

Query: 759 PIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSC 805
            + + KNLR+CGDCHTAM ++S    R I++RD  RFHHFK G CSC
Sbjct: 756 TVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSC 802



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 146/545 (26%), Positives = 233/545 (42%), Gaps = 95/545 (17%)

Query: 71  NTMIAAYANSGRLREAKKLFNETP--FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG 128
            +++AA A +GRLR+A   F+  P   ++    ++++  ++   L   A  +F  +   G
Sbjct: 96  TSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 155

Query: 129 -YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV-----------TGLVD 176
             RP  Y         S   L+    Q H  A   C  L+  V+             L+ 
Sbjct: 156 SLRPDDY---------SFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIA 206

Query: 177 MYAKC---KCIFEAEYLFKMFP------------------------------DGKNHVAW 203
           +Y KC   +  ++A  +    P                              DGK  V W
Sbjct: 207 LYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVW 266

Query: 204 TTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI-- 261
             MI+GY Q+G    A E FR M  E V  ++FTF S+L+ACA       G  VHG I  
Sbjct: 267 NAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIR 326

Query: 262 LSSGF--EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS------------- 306
           L   F  EA + V +AL+ +Y+K G +  A+R+ +   + + VSWN+             
Sbjct: 327 LQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDK 386

Query: 307 ------------------MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
                             M+ G+   G  ++AL LF +M A D+K  D+TY   +     
Sbjct: 387 AVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGE 446

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
              L + + +H+ +V+ GFE      NAL+ MYAK G ++ A +VF +M + D +SW ++
Sbjct: 447 LGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAM 506

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
           I+    HG   EAL+ F  M   GI PD +   +IL+AC    +++ G        +  G
Sbjct: 507 ISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFG 566

Query: 469 CSSLSVDN--SLVLVYAKCGCINDANRVFDSMHTRDVIT-WTALIMGCAQNGKGKEALQF 525
            S    D+   L+ +  + G I +A  +  +M      + W A++ GC  NG  +     
Sbjct: 567 ISP-GEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYA 625

Query: 526 YDQML 530
            DQ+ 
Sbjct: 626 ADQLF 630



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 187/414 (45%), Gaps = 60/414 (14%)

Query: 54  EAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGL 113
           +A ++ ++M D+D  TW TM+  Y   G +  A+ +F E   K    W+++I GY   G+
Sbjct: 219 DARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGM 278

Query: 114 DIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIK--------TCFD 165
             +AFELF +M  E     ++T  +VL  C+  G    G+  HG  I+            
Sbjct: 279 CADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALP 338

Query: 166 LNAFVVT---------------------------GLVDMYAKCKCIFEAEYLFKMFPDGK 198
           +N  +VT                            ++  Y    C+ +A  +FK+ P  K
Sbjct: 339 VNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPY-K 397

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           N ++W  M++GY   G    A++ F  MR E V+   +T+   + AC  + A   G Q+H
Sbjct: 398 NDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLH 457

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
             ++  GFEA+    +AL+ MYAKCG ++ AR +       + VSWN+MI    + G  +
Sbjct: 458 AHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGR 517

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN--- 375
           EAL LF +M A  I  D  ++ ++L   A N         H+ +V  GF  ++ +     
Sbjct: 518 EALELFDQMVAEGIDPDRISFLTILT--ACN---------HAGLVDEGFHYFESMKRDFG 566

Query: 376 ---------ALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYE 419
                     LID+  + G +  A  +   M  +   S W ++++GC  +G  E
Sbjct: 567 ISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDME 620



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 149/283 (52%), Gaps = 4/283 (1%)

Query: 36  ASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP 94
           A  +N ALV  +S  G+I  A ++F+ M+ +D  +WNT+++ Y +SG L +A ++F   P
Sbjct: 336 ALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMP 395

Query: 95  FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ 154
           +KN  +W  ++ GY + GL  +A +LF QM+ E  +P  YT    +  C   G L+ G Q
Sbjct: 396 YKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQ 455

Query: 155 FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
            H + ++  F+ +      L+ MYAKC  + +A  +F + P+  + V+W  MI+   Q+G
Sbjct: 456 LHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPN-LDSVSWNAMISALGQHG 514

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQ 273
           +G +A+E F  M  EG++ ++ +F +ILTAC      D G      +    G        
Sbjct: 515 HGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHY 574

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIVGFARQG 315
           + LID+  + G +  AR L++    +   S W +++ G    G
Sbjct: 575 ARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNG 617


>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 802

 Score =  497 bits (1280), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 254/607 (41%), Positives = 364/607 (59%), Gaps = 40/607 (6%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           + +++ AC      + G +VH    +S F   + + + LI MYAKCG L  A+ L +   
Sbjct: 66  YSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIP 125

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN------ID 351
             +  SWN+MI G+A  G  ++A  LF +M  RD    +F++ +V++ + S       +D
Sbjct: 126 QKDLCSWNTMISGYANVGRIEQARKLFDEMPHRD----NFSWNAVISGYVSQGWYMEALD 181

Query: 352 L------------------------------NNAKSVHSLIVKTGFEGYKFVNNALIDMY 381
           L                                 K +H  ++++G E  + V  AL+D+Y
Sbjct: 182 LFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLY 241

Query: 382 AKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVS 441
            K G+L+ A  +F+ M DKD++SWT++I  C   G  +E    F D+  SG+ P+    +
Sbjct: 242 GKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFA 301

Query: 442 SILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR 501
            +L+ACA+L   + G++VH    + G        ++LV VY+KCG    A RVF+ M   
Sbjct: 302 GVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRP 361

Query: 502 DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYF 561
           D+++WT+LI+G AQNG+   ALQF++ +L  GTKPD ITFVG+L AC+HAGL +    YF
Sbjct: 362 DLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYF 421

Query: 562 ESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGD 621
            S+ + +G+    DHYAC+IDLL RSG+  EA+ ++D M  +PD  +W +LL  CR+HG+
Sbjct: 422 HSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGN 481

Query: 622 LELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVE 681
           +EL ERAA  LFELEP N   Y+ LSN+Y+ AG W +  +VR  M +RGI K+PG SW+E
Sbjct: 482 IELAERAAKALFELEPENPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKKPGKSWIE 541

Query: 682 TNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYH 741
              QVH+F+  D  HP  +DI+  + E+   +KE GYV D NF LH+VEEE KE  + YH
Sbjct: 542 IKRQVHVFLVGDTSHPKISDIHEYLGELSKKMKEEGYVADTNFVLHDVEEEQKEQNIFYH 601

Query: 742 SEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAG 801
           SEKLAVAFG+++   G PI++FKNLR C DCH AMKYIS +  R II+RDSNRFH F  G
Sbjct: 602 SEKLAVAFGIISTSPGTPIKVFKNLRTCVDCHNAMKYISKIVQRKIIVRDSNRFHCFVDG 661

Query: 802 NCSCGDY 808
           +CSC DY
Sbjct: 662 SCSCKDY 668



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 137/413 (33%), Positives = 226/413 (54%), Gaps = 5/413 (1%)

Query: 13  LRCRSKIIGPARYTHNVGNSVKPASDL-NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWN 71
           LR R   +G   + H   ++  P   + NR +  ++  G + +A  LF+++  +D  +WN
Sbjct: 74  LRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWN 133

Query: 72  TMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL-EGYR 130
           TMI+ YAN GR+ +A+KLF+E P ++ F+W+++I GY + G  +EA +LF  MQ  E   
Sbjct: 134 TMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSN 193

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            + +TL + L   +    L+RG++ HGY I++  +L+  V T L+D+Y KC  + EA  +
Sbjct: 194 CNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGI 253

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F    D K+ V+WTTMI    ++G   +    FRD+   GV  N++TF  +L ACA ++A
Sbjct: 254 FDQMAD-KDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAA 312

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              G +VHG +   G++   +  SAL+ +Y+KCG+ ++ARR+       + VSW S+IVG
Sbjct: 313 EQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVG 372

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEG 369
           +A+ G    AL  F+ +     K D+ T+  VL+ C  + +     +  HS+  K G   
Sbjct: 373 YAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVH 432

Query: 370 YKFVNNALIDMYAKQGNL-DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
                  +ID+ A+ G   +   ++ N+    D   W SL+ GC  HG+ E A
Sbjct: 433 TADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELA 485



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 205/421 (48%), Gaps = 33/421 (7%)

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           +PS      ++  C     L+ G++ H +   + F     +   L+ MYAKC  + +A+ 
Sbjct: 60  QPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQM 119

Query: 190 LFKMFPDG------------------------------KNHVAWTTMITGYSQNGYGFKA 219
           LF   P                                +++ +W  +I+GY   G+  +A
Sbjct: 120 LFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEA 179

Query: 220 IECFRDMRV-EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID 278
           ++ FR M+  E    N FT  S L A AA+S+   G ++HG ++ SG E +  V +AL+D
Sbjct: 180 LDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLD 239

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
           +Y KCG L+ AR + +     + VSW +MI      G  KE  SLF+ +    ++ +++T
Sbjct: 240 LYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYT 299

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
           +  VLN  A        K VH  + + G++ + F  +AL+ +Y+K GN + A  VFN M 
Sbjct: 300 FAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMP 359

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG-Q 457
             D++SWTSLI G A +G  + AL++F  +  SG  PD +    +LSAC    +++ G +
Sbjct: 360 RPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLE 419

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQN 516
             H+V  K G   +      ++ + A+ G   +A  + D+M  + D   W +L+ GC  +
Sbjct: 420 YFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIH 479

Query: 517 G 517
           G
Sbjct: 480 G 480



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 52/223 (23%)

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           P   + S++++AC     LE G++VHA    S     + + N L+ +YAKCG + DA  +
Sbjct: 61  PSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQML 120

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
           FD +  +D+ +W  +I G A  G+ ++A + +D+M  R    D  ++  ++      G  
Sbjct: 121 FDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHR----DNFSWNAVISGYVSQG-- 174

Query: 555 ENARWYFESMD-----------------------------------KVYG--IKPGPDH- 576
               WY E++D                                   +++G  I+ G +  
Sbjct: 175 ----WYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELD 230

Query: 577 ---YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSAC 616
              +  ++DL G+ G L EA+ + DQM  + D   W  ++  C
Sbjct: 231 EVVWTALLDLYGKCGSLNEARGIFDQM-ADKDIVSWTTMIHRC 272


>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
 gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
          Length = 738

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 263/654 (40%), Positives = 380/654 (58%), Gaps = 35/654 (5%)

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE-SNQFTFPSILTACAAV 248
           +F   P   N   W T+I  ++ +    + +  F  M  E     N +TFP ++ A   V
Sbjct: 86  VFDQIPR-PNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEV 144

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
           S+   G  +HG ++ + F +++++ ++LI  Y+  GDLDSA  +       + VSWNSMI
Sbjct: 145 SSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMI 204

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
            GF + G  +EAL LFK+M   + + +  T   VL+  A  IDL   +     I + G +
Sbjct: 205 SGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGID 264

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE--------- 419
               ++NA++DMY K G+L+ A  +F+ M++KD++SWT++I G A  G Y+         
Sbjct: 265 INLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVM 324

Query: 420 ----------------------EALKYFSDMRIS-GICPDHVVVSSILSACAELTVLEFG 456
                                 EAL  F +++++    P+ V ++S L+ACA+L  ++ G
Sbjct: 325 PREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLG 384

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
             +H    K G   +  +  SL+ +Y+KCG +  A  VF S+  RDV  W+A+I G A +
Sbjct: 385 GWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMH 444

Query: 517 GKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH 576
           G G+ A+  + +M     KP+ +TF  LL ACSH+GL +  R +F  M  VYG+ PG  H
Sbjct: 445 GHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKH 504

Query: 577 YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELE 636
           YACM+D+LGR+G L EA  L+++M   P A+VW ALL ACR++G++EL E A + L E +
Sbjct: 505 YACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETD 564

Query: 637 PMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGH 696
             N   YV LSN+Y+ AGKW+  +R+R+ MK  G+ KEPGCS +E N  +H F+  D  H
Sbjct: 565 SNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSH 624

Query: 697 PLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEE-GKEIGLAYHSEKLAVAFGLLTLP 755
           PL T+IYSK+DEI+  IK  GYV D +  L  VEEE  KE  L  HSEKLA+A+GL+ + 
Sbjct: 625 PLSTEIYSKLDEIVARIKSTGYVSDESHLLQFVEEEYMKEHALNLHSEKLAIAYGLIRME 684

Query: 756 QGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
              PIRI KNLRVCGDCH+  K IS +Y R I+LRD  RFHHF  GNCSC DYW
Sbjct: 685 PSQPIRIVKNLRVCGDCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 136/498 (27%), Positives = 240/498 (48%), Gaps = 46/498 (9%)

Query: 54  EAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGL 113
             G  F+  S    FT      A ++   L  A K+F++ P  N +TW++LI  +++   
Sbjct: 55  RTGLFFDPPSATKLFT----ACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFASSPK 110

Query: 114 DIEAFELFWQMQLEGYR-PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVT 172
            I+   +F QM  E  R P+ YT   V++  +    L  G+  HG  +K  F  + F+  
Sbjct: 111 PIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISN 170

Query: 173 GLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
            L+  Y+    +  A  +F    + K+ V+W +MI+G+ Q G   +A++ F+ M++E   
Sbjct: 171 SLIHFYSSLGDLDSAYLVFSKIVE-KDIVSWNSMISGFVQGGSPEEALQLFKRMKMENAR 229

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
            N+ T   +L+ACA     +FG      I  +G + N+ + +A++DMY KCG L+ ARRL
Sbjct: 230 PNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRL 289

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFH-------------------------------KEAL 321
            +  E  + VSW +MI G+A+ G +                               KEAL
Sbjct: 290 FDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEAL 349

Query: 322 SLFKKMHA-RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDM 380
           ++F+++   ++ K ++ T  S L   A    ++    +H  I K G +    +  +LIDM
Sbjct: 350 AIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDM 409

Query: 381 YAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVV 440
           Y+K G+L+ A  VF  ++ +DV  W+++I G A HG    A+  FS M+ + + P+ V  
Sbjct: 410 YSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTF 469

Query: 441 SSILSACAELTVLEFGQ----QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFD 496
           +++L AC+   +++ G+    Q+  V+    G    +    +V +  + GC+ +A  + +
Sbjct: 470 TNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYAC---MVDILGRAGCLEEAVELIE 526

Query: 497 SMH-TRDVITWTALIMGC 513
            M        W AL+  C
Sbjct: 527 KMPIVPSASVWGALLGAC 544



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 212/440 (48%), Gaps = 50/440 (11%)

Query: 232 ESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG-----DL 286
           +SN  T P ++  CA    +    Q+H  +L +G     +   +   ++  C       L
Sbjct: 27  KSNPSTVPILIDKCAN---KKHLKQLHAHMLRTGL---FFDPPSATKLFTACALSSPSSL 80

Query: 287 DSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM-HARDIKIDDFTYPSVLNC 345
           D A ++ +     N  +WN++I  FA      + L +F +M H      + +T+P V+  
Sbjct: 81  DYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKA 140

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
                 L   +++H +++K  F    F++N+LI  Y+  G+LD A++VF+ + +KD++SW
Sbjct: 141 ATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSW 200

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
            S+I+G    GS EEAL+ F  M++    P+ V +  +LSACA+   LEFG+       +
Sbjct: 201 NSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIER 260

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCA----------- 514
           +G   +L + N+++ +Y KCG + DA R+FD M  +D+++WT +I G A           
Sbjct: 261 NGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRV 320

Query: 515 --------------------QNGKGKEALQFYDQM-LARGTKPDYITFVGLLFACSHAGL 553
                               QNGK KEAL  + ++ L + TKP+ +T    L AC+  G 
Sbjct: 321 FDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGA 380

Query: 554 AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
            +   W    + K  GIK        +ID+  + G L +A  +    V   D  VW A++
Sbjct: 381 MDLGGWIHVYIKK-QGIKLNFHITTSLIDMYSKCGHLEKALEVFYS-VERRDVFVWSAMI 438

Query: 614 SACRVHGDLELGERAANNLF 633
           +   +HG      RAA +LF
Sbjct: 439 AGLAMHGH----GRAAIDLF 454



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 191/397 (48%), Gaps = 49/397 (12%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N++I  Y++ G L  A  +F++   K+  +W+S+I G+   G   EA +LF +M+
Sbjct: 165 DLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMK 224

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           +E  RP++ T+  VL  C+ +  L+ G     Y  +   D+N  +   ++DMY KC  + 
Sbjct: 225 MENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLE 284

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYS-------------------------------QNG 214
           +A  LF    + K+ V+WTTMI GY+                               QNG
Sbjct: 285 DARRLFDKMEE-KDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNG 343

Query: 215 YGFKAIECFRDMRV-EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
              +A+  FR++++ +  + N+ T  S L ACA + A D G  +H  I   G + N ++ 
Sbjct: 344 KPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHIT 403

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
           ++LIDMY+KCG L+ A  +    E  +   W++MI G A  G  + A+ LF KM    +K
Sbjct: 404 TSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVK 463

Query: 334 IDDFTYPSVLNCFASNIDL--------NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
            +  T+ ++L C  S+  L        N  + V+ ++   G + Y      ++D+  + G
Sbjct: 464 PNAVTFTNLL-CACSHSGLVDEGRLFFNQMRPVYGVV--PGSKHYA----CMVDILGRAG 516

Query: 386 NLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEA 421
            L+ A  +   M      S W +L+  C  +G+ E A
Sbjct: 517 CLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELA 553



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 143/284 (50%), Gaps = 16/284 (5%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           L+ A++D +   G +++A +LF+KM ++D  +W TMI  YA  G    A+++F+  P ++
Sbjct: 269 LSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPRED 328

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQL-EGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
              W++LI  Y   G   EA  +F ++QL +  +P++ TL + L  C+  G +  G   H
Sbjct: 329 ITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIH 388

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
            Y  K    LN  + T L+DMY+KC  + +A  +F    + ++   W+ MI G + +G+G
Sbjct: 389 VYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSV-ERRDVFVWSAMIAGLAMHGHG 447

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG-------AQVHGCILSSGFEAN 269
             AI+ F  M+   V+ N  TF ++L AC+     D G         V+G +  S   A 
Sbjct: 448 RAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYA- 506

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
                 ++D+  + G L+ A  L+E   I    S    ++G  R
Sbjct: 507 -----CMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACR 545



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 146/308 (47%), Gaps = 10/308 (3%)

Query: 356 KSVHSLIVKTG--FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
           K +H+ +++TG  F+             +   +LD A  VF+ +   ++ +W +LI   A
Sbjct: 47  KQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFA 106

Query: 414 YHGSYEEALKYFSDM-RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
                 + L  F  M   S   P+      ++ A  E++ L  GQ +H + +K+   S L
Sbjct: 107 SSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDL 166

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
            + NSL+  Y+  G ++ A  VF  +  +D+++W ++I G  Q G  +EALQ + +M   
Sbjct: 167 FISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKME 226

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIE 592
             +P+ +T VG+L AC+     E  RW  + +++  GI         M+D+  + G L +
Sbjct: 227 NARPNRVTMVGVLSACAKRIDLEFGRWACDYIER-NGIDINLILSNAMLDMYVKCGSLED 285

Query: 593 AKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM-NAMPYVQLSNMYS 651
           A+ L D+M  E D   W  ++      GD +    AA  +F++ P  +   +  L + Y 
Sbjct: 286 ARRLFDKM-EEKDIVSWTTMIDGYAKVGDYD----AARRVFDVMPREDITAWNALISSYQ 340

Query: 652 TAGKWEDA 659
             GK ++A
Sbjct: 341 QNGKPKEA 348


>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 264/628 (42%), Positives = 371/628 (59%), Gaps = 9/628 (1%)

Query: 191  FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
            F  + D  N  +W ++I   ++ G   +A+  F  +R  G+   + +FP  + +C+A+  
Sbjct: 1098 FYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCD 1157

Query: 251  RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
               G   H      GFE +++V SALIDMY+KCG L  AR L +   + N VSW SMI G
Sbjct: 1158 LVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITG 1217

Query: 311  FARQGFHKEALSLFKKM--------HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
            + +      AL LFK             ++ +D     SVL+  +        + VH  +
Sbjct: 1218 YVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFV 1277

Query: 363  VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
            VK GF+G   V N L+D YAK G    +  VF+ M++KD ISW S+I   A  G   EAL
Sbjct: 1278 VKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEAL 1337

Query: 423  KYFSDM-RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
            + F  M R  G+  + V +S++L ACA    L  G+ +H   +K     ++ V  S++ +
Sbjct: 1338 EVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDM 1397

Query: 482  YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
            Y KCG +  A + FD M  ++V +WTA++ G   +G+ KEAL  + +M+  G KP+YITF
Sbjct: 1398 YCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITF 1457

Query: 542  VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
            V +L ACSHAGL E    +F +M   Y I+PG +HY CM+DL GR+G L EA  L+ +M 
Sbjct: 1458 VSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMK 1517

Query: 602  GEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
             +PD  VW +LL ACR+H +++LGE AA  LFEL+P N   YV LSN+Y+ AG+W D  R
Sbjct: 1518 MKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVER 1577

Query: 662  VRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPD 721
            +R LMK+R + K PG S VE   +VH+F+  D+ HP    IY  ++++ L +++ GYVP+
Sbjct: 1578 MRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPN 1637

Query: 722  MNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISA 781
            M   LH+V+EE KEI L  HSEKLAVAFG++    G  I I KNLRVCGDCHT +K IS 
Sbjct: 1638 MTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKLISK 1697

Query: 782  VYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            +  R  ++RDS RFHHFK G CSCGDYW
Sbjct: 1698 LVHRDFVVRDSKRFHHFKDGVCSCGDYW 1725



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 132/436 (30%), Positives = 222/436 (50%), Gaps = 28/436 (6%)

Query: 97   NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
            N  +W+S+I   +  G  +EA   F  ++  G  P++ +    ++ CS    L  G   H
Sbjct: 1106 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 1165

Query: 157  GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
              A    F+ + FV + L+DMY+KC  + +A  LF   P  +N V+WT+MITGY QN   
Sbjct: 1166 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPL-RNVVSWTSMITGYVQNEQA 1224

Query: 217  FKAIECFRDMRVEGVES--------NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEA 268
              A+  F+D   E  E         +     S+L+AC+ VS +     VHG ++  GF+ 
Sbjct: 1225 DNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDG 1284

Query: 269  NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM- 327
            ++ V + L+D YAKCG    ++++ ++ E  +++SWNSMI  +A+ G   EAL +F  M 
Sbjct: 1285 SIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMV 1344

Query: 328  HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL 387
                ++ +  T  +VL   A    L   K +H  ++K   E    V  ++IDMY K G +
Sbjct: 1345 RHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRV 1404

Query: 388  DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSAC 447
            + A   F+ M++K+V SWT+++ G   HG  +EAL  F  M  +G+ P+++   S+L+AC
Sbjct: 1405 EMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAAC 1464

Query: 448  AELTVLE-----FGQQVHAVFLKSG----GCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
            +   ++E     F    H   ++ G    GC        +V ++ + GC+N+A  +   M
Sbjct: 1465 SHAGLVEEGWHWFNAMKHKYDIEPGIEHYGC--------MVDLFGRAGCLNEAYNLIKRM 1516

Query: 499  HTR-DVITWTALIMGC 513
              + D + W +L+  C
Sbjct: 1517 KMKPDFVVWGSLLGAC 1532



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 120/371 (32%), Positives = 186/371 (50%), Gaps = 35/371 (9%)

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS--WNSMIVGFAR 313
           Q+H  I+ SG   +  +   LI +Y+  G +  A  +L + +I N  +  WN +I     
Sbjct: 45  QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRI--AYAILLFYQIQNPCTFTWNLIIRANTI 102

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
            G  ++AL L+K M  + I  D FT+P V+    + + ++  K VH  ++K GF G  FV
Sbjct: 103 NGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFV 162

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY--------------- 418
            N LID Y K G+   A  VF  M+ ++V+SWT++I+G    G                 
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNV 222

Query: 419 ----------------EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAV 462
                           EEAL+ F  M+   I P+   + S++ AC E+ +L  G+ +H  
Sbjct: 223 VSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDY 282

Query: 463 FLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEA 522
            +K+     + +  +L+ +Y+KCG I DA  VF++M  + + TW ++I     +G G+EA
Sbjct: 283 AIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEA 342

Query: 523 LQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMID 582
           L  + +M     KPD ITF+G+L AC H    +    YF  M + YGI P P+HY CM +
Sbjct: 343 LNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTE 402

Query: 583 LLGRSGKLIEA 593
           L  RS  L EA
Sbjct: 403 LYARSNNLDEA 413



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 185/369 (50%), Gaps = 24/369 (6%)

Query: 64   DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY-SNYGLD--IEAFEL 120
            + D F  + +I  Y+  G+L++A+ LF+E P +N  +W+S+I GY  N   D  +  F+ 
Sbjct: 1174 ETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKD 1233

Query: 121  FWQMQLEGYRPSQYTLD-----NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
            F + + E    +   LD     +VL  CS        E  HG+ +K  FD +  V   L+
Sbjct: 1234 FLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLM 1293

Query: 176  DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESN 234
            D YAKC     ++ +F    + K+ ++W +MI  Y+Q+G   +A+E F  M R  GV  N
Sbjct: 1294 DAYAKCGQPLVSKKVFDWMEE-KDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYN 1352

Query: 235  QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
              T  ++L ACA   A   G  +H  ++    E NV V +++IDMY KCG ++ A++  +
Sbjct: 1353 AVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFD 1412

Query: 295  YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNID-- 351
              +  N  SW +M+ G+   G  KEAL +F KM    +K +  T+ SVL  C  + +   
Sbjct: 1413 RMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEE 1472

Query: 352  ----LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWT 406
                 N  K  H   ++ G E Y      ++D++ + G L+ A+ +   M+ K D + W 
Sbjct: 1473 GWHWFNAMK--HKYDIEPGIEHY----GCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWG 1526

Query: 407  SLITGCAYH 415
            SL+  C  H
Sbjct: 1527 SLLGACRIH 1535



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 157/335 (46%), Gaps = 32/335 (9%)

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
            Q H   I++    +  +   L+ +Y+    I  A  LF    +      W  +I   + 
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCT-FTWNLIIRANTI 102

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYV 272
           NG   +A+  +++M  +G+ +++FTFP ++ AC    + D G  VHG ++  GF  +V+V
Sbjct: 103 NGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFV 162

Query: 273 QSALIDMYAK-------------------------------CGDLDSARRLLEYSEIDNE 301
           Q+ LID Y K                               CGDL  ARR+ +     N 
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNV 222

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           VSW +MI G+ R    +EAL LFK+M A +I  +++T  S++        L   + +H  
Sbjct: 223 VSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDY 282

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
            +K   E   ++  ALIDMY+K G++  A  VF  M  K + +W S+IT    HG  +EA
Sbjct: 283 AIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEA 342

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
           L  FS+M    + PD +    +L AC  +  ++ G
Sbjct: 343 LNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEG 377



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 178/412 (43%), Gaps = 49/412 (11%)

Query: 25  YTHNVGNS----VKPASDL--NRALVDFSNSGEIDEAGQLFEKMS----DRDGFTWNTMI 74
           YTH+V  S    + P  ++   +AL    N        Q+  K+       D      +I
Sbjct: 7   YTHDVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLI 66

Query: 75  AAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQY 134
             Y+  GR+  A  LF +      FTW+ +I   +  GL  +A  L+  M  +G    ++
Sbjct: 67  HLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKF 126

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC------------- 181
           T   V++ C+    +  G+  HG  IK  F  + FV   L+D Y KC             
Sbjct: 127 TFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKM 186

Query: 182 ----------------KC--IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
                            C  + EA  +F   P  KN V+WT MI GY +N    +A+E F
Sbjct: 187 RVRNVVSWTTVISGLISCGDLQEARRIFDEIPS-KNVVSWTAMINGYIRNQQPEEALELF 245

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
           + M+ E +  N++T  S++ AC  +     G  +H   + +  E  VY+ +ALIDMY+KC
Sbjct: 246 KRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKC 305

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
           G +  A  + E     +  +WNSMI      G  +EAL+LF +M   ++K D  T+  VL
Sbjct: 306 GSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVL 365

Query: 344 NCFASNIDLNNAKSVHSLIVKT----GFEGYKFVNNALIDMYAKQGNLDCAF 391
               + + + N K   +   +     G          + ++YA+  NLD AF
Sbjct: 366 ---CACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAF 414



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 146/323 (45%), Gaps = 36/323 (11%)

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           +  + + +H+ I+++G    + +   LI +Y+  G +  A ++F  +Q+    +W  +I 
Sbjct: 39  NFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIR 98

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
               +G  E+AL  + +M   GI  D      ++ AC     ++ G+ VH   +K G   
Sbjct: 99  ANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSG 158

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRD---------------------------- 502
            + V N+L+  Y KCG    A +VF+ M  R+                            
Sbjct: 159 DVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIP 218

Query: 503 ---VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW 559
              V++WTA+I G  +N + +EAL+ + +M A    P+  T V L+ AC+  G+    R 
Sbjct: 219 SKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRG 278

Query: 560 YFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVH 619
             +   K   I+ G      +ID+  + G + +A  + + M  +   T W +++++  VH
Sbjct: 279 IHDYAIK-NCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPT-WNSMITSLGVH 336

Query: 620 GDLELGERAANNLFELEPMNAMP 642
           G   LG+ A N   E+E +N  P
Sbjct: 337 G---LGQEALNLFSEMERVNVKP 356



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/160 (22%), Positives = 70/160 (43%), Gaps = 34/160 (21%)

Query: 50   GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS 109
            G ++ A + F++M +++  +W  M+A Y   GR +                         
Sbjct: 1402 GRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAK------------------------- 1436

Query: 110  NYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAF 169
                  EA ++F++M   G +P+  T  +VL  CS  GL++ G  +   A+K  +D+   
Sbjct: 1437 ------EALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFN-AMKHKYDIEPG 1489

Query: 170  V--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
            +     +VD++ +  C+ EA  L K      + V W +++
Sbjct: 1490 IEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLL 1529



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 92/215 (42%), Gaps = 5/215 (2%)

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
           +Q+HA  ++SG  +   +   L+ +Y+  G I  A  +F  +      TW  +I     N
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 517 GKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH 576
           G  ++AL  Y  M+ +G   D  TF  ++ AC++    +  +    S+ K YG       
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIK-YGFSGDVFV 162

Query: 577 YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELE 636
              +ID   + G    A  + ++M    +   W  ++S     GDL+   R  +   E+ 
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKMRVR-NVVSWTTVISGLISCGDLQEARRIFD---EIP 218

Query: 637 PMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
             N + +  + N Y    + E+A  + K M++  I
Sbjct: 219 SKNVVSWTAMINGYIRNQQPEEALELFKRMQAENI 253


>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 275/690 (39%), Positives = 395/690 (57%), Gaps = 35/690 (5%)

Query: 155 FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP--DGKNHVAWTTMITGYSQ 212
            H   IKT      + ++ L++            Y   +F      N + W TM  G++ 
Sbjct: 6   IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 65

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYV 272
           +     A+  +  M   G+  N +TFP +L +CA   A   G Q+HG +L  G++ ++YV
Sbjct: 66  SSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYV 125

Query: 273 QSALIDMYAKCGDLDSARRLLEYSE-------------------------------IDNE 301
            ++LI MY + G L+ AR++ + S                                I + 
Sbjct: 126 HTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDV 185

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           VSWN+MI G+A  G +KEAL LFK+M   +++ D+ T  SV++  A +  +   + VHS 
Sbjct: 186 VSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSW 245

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           I   GF     + NALID+Y K G ++ A  +F  +  KDVISW +LI G  +   Y+EA
Sbjct: 246 IDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEA 305

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK--SGGCSSLSVDNSLV 479
           L  F +M  SG  P+ V + SIL ACA L  +E G+ +H    K   G  ++ S   SL+
Sbjct: 306 LLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLI 365

Query: 480 LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
            +YAKCG I  A +VFDS+  R + +W A+I G A +G+   A   + +M     +PD I
Sbjct: 366 DMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDI 425

Query: 540 TFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ 599
           TFVGLL ACSH+G+ +  R  F SM + Y I P  +HY CMIDLLG SG   EA+ +++ 
Sbjct: 426 TFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINT 485

Query: 600 MVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDA 659
           M  EPD  +W +LL AC++HG++ELGE  A NL ++EP N   YV LSN+Y+TAG+W + 
Sbjct: 486 MEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEV 545

Query: 660 ARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYV 719
           A++R L+  +G++K PGCS +E +S VH FI  D+ HP   +IY  ++E+ +L++EAG+V
Sbjct: 546 AKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFV 605

Query: 720 PDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYI 779
           PD +  L  +EEE KE  L +HSEKLA+AFGL++   G  + I KNLRVC +CH A K I
Sbjct: 606 PDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLI 665

Query: 780 SAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           S +Y R II RD  RFHHF+ G CSC DYW
Sbjct: 666 SKIYKREIIARDRTRFHHFRDGVCSCNDYW 695



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 227/446 (50%), Gaps = 23/446 (5%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +  +G +++A ++F++ S RD  ++  +I  YA+ G +  A+K+F+E P K+  +W+++I
Sbjct: 133 YVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMI 192

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            GY+  G + EA ELF +M     RP + T+ +V+  C+    ++ G Q H +     F 
Sbjct: 193 SGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFG 252

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            N  +V  L+D+Y KC  +  A  LF+     K+ ++W T+I GY+      +A+  F++
Sbjct: 253 SNLKIVNALIDLYIKCGEVETACGLFEGL-SYKDVISWNTLIGGYTHMNLYKEALLLFQE 311

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS--SGFEANVYVQSALIDMYAKC 283
           M   G   N  T  SIL ACA + A + G  +H  I     G       +++LIDMYAKC
Sbjct: 312 MLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKC 371

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
           GD+++A+++ +     +  SWN+MI GFA  G    A  +F +M   +I+ DD T+  +L
Sbjct: 372 GDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLL 431

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN-----ALIDMYAKQGNLDCAFMVFNLMQ 398
           +  + +  L+  +     I ++  E YK          +ID+    G    A  + N M+
Sbjct: 432 SACSHSGMLDLGRH----IFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTME 487

Query: 399 -DKDVISWTSLITGCAYHGSYEEALKYFSDM-RISGICP-DHVVVSSILSACAELTVLEF 455
            + D + W SL+  C  HG+ E    Y  ++ +I    P  +V++S+I +       +  
Sbjct: 488 MEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEV-- 545

Query: 456 GQQVHAVFLKSG-----GCSSLSVDN 476
             ++ A+    G     GCSS+ +D+
Sbjct: 546 -AKIRALLNDKGMKKVPGCSSIEIDS 570



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 154/579 (26%), Positives = 259/579 (44%), Gaps = 101/579 (17%)

Query: 55  AGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLD 114
           A  +FE + + +   WNTM   +A S                                  
Sbjct: 41  AISVFETIQEPNLLIWNTMFRGHALSSD-------------------------------P 69

Query: 115 IEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
           + A  L+  M   G  P+ YT   +L+ C+     + G+Q HG+ +K  +DL+ +V T L
Sbjct: 70  VSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSL 129

Query: 175 VDMYAKCKCIFEAEYLF----------------------------KMFPD--GKNHVAWT 204
           + MY +   + +A  +F                            KMF +   K+ V+W 
Sbjct: 130 ISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWN 189

Query: 205 TMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS 264
            MI+GY++ G   +A+E F++M    V  ++ T  S+++ACA  ++ + G QVH  I   
Sbjct: 190 AMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDH 249

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLF 324
           GF +N+ + +ALID+Y KCG++++A  L E     + +SWN++I G+     +KEAL LF
Sbjct: 250 GFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLF 309

Query: 325 KKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK--TGFEGYKFVNNALIDMYA 382
           ++M       +D T  S+L   A    +   + +H  I K   G         +LIDMYA
Sbjct: 310 QEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYA 369

Query: 383 KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
           K G+++ A  VF+ + ++ + SW ++I G A HG    A   FS MR + I PD +    
Sbjct: 370 KCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVG 429

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
           +LSAC+   +L+ G+ +           S+  D  +       GC+ D            
Sbjct: 430 LLSACSHSGMLDLGRHIF---------RSMKEDYKITPKLEHYGCMID------------ 468

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
                  ++G   +G  KEA +  + M     +PD + +  LL AC   G  E    Y +
Sbjct: 469 -------LLG--HSGLFKEAEEMINTM---EMEPDGVIWCSLLKACKMHGNVELGESYAQ 516

Query: 563 SMDKVYGIKPGPDHYACMIDLL---GRSGKLIEAKALLD 598
           ++ K+    PG   Y  + ++    GR  ++ + +ALL+
Sbjct: 517 NLIKIEPKNPGS--YVLLSNIYATAGRWNEVAKIRALLN 553



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 123/292 (42%), Gaps = 36/292 (12%)

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDC---AFMVFNLMQDKDVISWTSLITGC 412
           + +H+ ++KTG     +  + LI+      + D    A  VF  +Q+ +++ W ++  G 
Sbjct: 4   RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 63

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
           A       AL  +  M   G+ P+      +L +CA+      GQQ+H   LK G    L
Sbjct: 64  ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDL 123

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTR------------------------------- 501
            V  SL+ +Y + G + DA +VFD    R                               
Sbjct: 124 YVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIK 183

Query: 502 DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYF 561
           DV++W A+I G A+ G  KEAL+ + +M+    +PD  T V ++ AC+ +   E  R   
Sbjct: 184 DVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVH 243

Query: 562 ESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
             +D  +G          +IDL  + G++  A  L + +    D   W  L+
Sbjct: 244 SWIDD-HGFGSNLKIVNALIDLYIKCGEVETACGLFEGL-SYKDVISWNTLI 293


>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
 gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 255/681 (37%), Positives = 395/681 (58%), Gaps = 4/681 (0%)

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT--CFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           S   L  +L+L +    L+ G+  H + I T    + +   V  L++ YAK   +  A  
Sbjct: 28  SPLDLIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHN 87

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACAAV 248
           LF   P+ +N V+W+ ++TGY  NG+  K I   +DM  EG V  N++     +++C   
Sbjct: 88  LFDRMPE-RNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDR 146

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
              + G Q HG +L +GF  + YV++AL+ MY+KC  +  A  +     +++ V++NS++
Sbjct: 147 GRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSIL 206

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
                 G+ +E L + + M +  +K D  T+ +  +  AS  DL     VH  ++ +  E
Sbjct: 207 SSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVE 266

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
              +V++A+I+MY K G    A  VF+ +Q ++V+ WT+++  C  +G +EEAL  FS M
Sbjct: 267 CDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKM 326

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
               +  +    + +L+ACA L+    G  +H    KSG    + V N+L+ +YAK G I
Sbjct: 327 EQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDI 386

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
             A +VF  M  RD+ITW A+I G + +G GK+AL  +  MLA    P+Y+TF G+L AC
Sbjct: 387 EAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSAC 446

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
            H GL +   +Y   + K +G++PG +HY C++ LL ++G+L EA+  +     + D   
Sbjct: 447 GHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVA 506

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           W+ LL+AC VH +  LG   A  + E++P +   Y  LSN+Y+   +W+   +VRKLM+ 
Sbjct: 507 WRTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVVKVRKLMRD 566

Query: 669 RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHN 728
           + I+KEPG SW+E  +  HIF SED  HP     Y K+ E++ +IK  GY PD+   LH+
Sbjct: 567 KKIKKEPGVSWIEIGNVTHIFTSEDNKHPDYGQTYQKVKELLAMIKPLGYTPDIGAVLHD 626

Query: 729 VEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHII 788
           VE+E KE  L+YHSEKLA+A+GLL LP  A I + KNLR+C DCH+A++ IS V  R I+
Sbjct: 627 VEDEQKEYYLSYHSEKLAIAYGLLKLPSEASILVIKNLRICDDCHSAVRLISKVTNRVIV 686

Query: 789 LRDSNRFHHFKAGNCSCGDYW 809
           +RD+NRFHHF+ G CSC DYW
Sbjct: 687 VRDANRFHHFRDGRCSCLDYW 707



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 157/513 (30%), Positives = 268/513 (52%), Gaps = 15/513 (2%)

Query: 31  NSVKPASDLNR-ALVDFSNSGEIDEAGQLFE-------KMSDRDGFTWNTMIAAYANSGR 82
           N+V P+S L+   L+  S   +  + G+          + ++      N++I  YA   +
Sbjct: 22  NAVSPSSPLDLIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQ 81

Query: 83  LREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVLR 141
           +  A  LF+  P +N  +WS+L+ GY   G  ++   L   M  EG   P++Y L   + 
Sbjct: 82  VSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAIS 141

Query: 142 LCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHV 201
            C  +G ++ G Q HG  +KT F  + +V   LV MY+KC  + +A  ++   P   + V
Sbjct: 142 SCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVN-DIV 200

Query: 202 AWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI 261
           A+ ++++   +NGY  + +E  R M  E V+ ++ TF +  + CA++     G  VHG +
Sbjct: 201 AYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKM 260

Query: 262 LSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEAL 321
           L+S  E + YV SA+I+MY KCG    AR + +  +  N V W +++    + G  +EAL
Sbjct: 261 LTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEAL 320

Query: 322 SLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMY 381
           +LF KM   ++K ++FTY  +LN  A      N   +H    K+GF+ +  V NALI+MY
Sbjct: 321 NLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMY 380

Query: 382 AKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVS 441
           AK G+++ A  VF+ M  +D+I+W ++I G ++HG  ++AL  F DM  +   P++V  +
Sbjct: 381 AKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFT 440

Query: 442 SILSACAELTVLEFG-QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT 500
            +LSAC  L +++ G   +H +  + G    L     +V + +K G +N+A     +   
Sbjct: 441 GVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPV 500

Query: 501 R-DVITWTALIMGC--AQN-GKGKEALQFYDQM 529
           + DV+ W  L+  C   QN G G+   +F  +M
Sbjct: 501 KWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEM 533


>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 272/789 (34%), Positives = 423/789 (53%), Gaps = 102/789 (12%)

Query: 52  IDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNY 111
           +D + Q+F+++ + +GF WNTM+ AY  S    +A  L+ +   KN            N 
Sbjct: 91  LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLY-KLMVKN------------NV 137

Query: 112 GLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV 171
           G                  P  YT   V++ C+++ L   G++ H + +K  FD + +V 
Sbjct: 138 G------------------PDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQ 179

Query: 172 TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV 231
             L++MYA C  + +A  LF   P   + V+W +++ GY + G                V
Sbjct: 180 NTLINMYAVCGNMRDARKLFDESP-VLDSVSWNSILAGYVKKG---------------DV 223

Query: 232 ESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR 291
           E  +  F  +                         + N+   +++I +  K G +  A +
Sbjct: 224 EEAKLIFDQMP------------------------QRNIVASNSMIVLLGKMGQVMEAWK 259

Query: 292 LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID 351
           L    +  + VSW+++I G+ + G ++EAL +F +M+A  +++D+    SVL+  A    
Sbjct: 260 LFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSI 319

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYA----------------------------- 382
           +   K +H L+++ G E Y  + NALI MY+                             
Sbjct: 320 VKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISG 379

Query: 383 --KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVV 440
             K G+++ A  +F++M +KD++SW+++I+G A H  + E L  F +M++  I PD  ++
Sbjct: 380 CMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETIL 439

Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT 500
            S++SAC  L  L+ G+ VHA   K+G   ++ +  +L+ +Y KCGC+ +A  VF+ M  
Sbjct: 440 VSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEE 499

Query: 501 RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWY 560
           + V +W ALI+G A NG  + +L  + +M   G  P+ ITF+G+L AC H GL +  R +
Sbjct: 500 KGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCH 559

Query: 561 FESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
           F SM + +GI+P   HY CM+DLLGR+G L EA+ L++ M   PD   W ALL AC+ HG
Sbjct: 560 FASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHG 619

Query: 621 DLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWV 680
           D E+GER    L EL+P +   +V LSN++++ G WED   VR +MK +G+ K PGCS +
Sbjct: 620 DTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLI 679

Query: 681 ETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAY 740
           E N  VH F++ D+ HP    +   ++E+   +K  GY PD N    +++EE KE  L  
Sbjct: 680 EANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFR 739

Query: 741 HSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKA 800
           HSEKLA+AFGLLT+    PIRI KNLR+C DCHTA K IS  Y R I++RD +RFH+FK 
Sbjct: 740 HSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKE 799

Query: 801 GNCSCGDYW 809
           G CSC DYW
Sbjct: 800 GACSCMDYW 808



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 125/476 (26%), Positives = 229/476 (48%), Gaps = 44/476 (9%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  L  +   G+++EA  +F++M  R+    N+MI      G++ EA KLFNE   K+  
Sbjct: 211 NSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMV 270

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           +WS+LI GY   G+  EA  +F +M   G R  +  + +VL  C+   +++ G+  HG  
Sbjct: 271 SWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLV 330

Query: 160 IKTCFDLNAFVVTGLVDMYA-------------------------------KCKCIFEAE 188
           I+   +    +   L+ MY+                               KC  + +A 
Sbjct: 331 IRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKAR 390

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
            LF + P+ K+ V+W+ +I+GY+Q+    + +  F +M++  +  ++    S+++AC  +
Sbjct: 391 ALFDVMPE-KDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHL 449

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
           +A D G  VH  I  +G + NV + + L+DMY KCG +++A  +    E     SWN++I
Sbjct: 450 AALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALI 509

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH--SLIVKTG 366
           +G A  G  + +L +F +M    +  ++ T+  VL     ++ L +    H  S+I K G
Sbjct: 510 IGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGA-CRHMGLVDEGRCHFASMIEKHG 568

Query: 367 FEGYKFVNNALIDMYAKQGNLDCA-FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
            E        ++D+  + G L+ A  ++ ++    DV +W +L+  C  HG  E   +  
Sbjct: 569 IEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERV- 627

Query: 426 SDMRISGICPD----HVVVSSILSACAELT-VLEF-GQQVHAVFLKSGGCSSLSVD 475
              ++  + PD    HV++S+I ++  +   VLE  G       +K+ GCS +  +
Sbjct: 628 -GRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEAN 682



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/477 (23%), Positives = 212/477 (44%), Gaps = 100/477 (20%)

Query: 261 ILSSGFEANVYVQSALIDMYAKCG--DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
           ++ +GF ++ +  S L+          LD + ++ +  E  N   WN+M+  + +    +
Sbjct: 64  MILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAE 123

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           +AL L+K M   ++  D++TYP V+   A  +     K +H  ++K GF+   +V N LI
Sbjct: 124 KALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLI 183

Query: 379 DMYA-------------------------------KQGNLDCAFMVFNLMQDKDV----- 402
           +MYA                               K+G+++ A ++F+ M  +++     
Sbjct: 184 NMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNS 243

Query: 403 --------------------------ISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
                                     +SW++LI+G   +G YEEAL  F +M  +G+  D
Sbjct: 244 MIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLD 303

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA------------- 483
            VVV S+LSACA L++++ G+ +H + ++ G  S +++ N+L+ +Y+             
Sbjct: 304 EVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFN 363

Query: 484 ------------------KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
                             KCG +  A  +FD M  +D+++W+A+I G AQ+    E L  
Sbjct: 364 GSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLAL 423

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
           + +M     +PD    V ++ AC+H    +  +W    + K  G+K        ++D+  
Sbjct: 424 FHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRK-NGLKVNVILGTTLLDMYM 482

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           + G +  A  + + M  E   + W AL+    V+G   L ER+ +   E++    +P
Sbjct: 483 KCGCVENALEVFNGM-EEKGVSSWNALIIGLAVNG---LVERSLDMFSEMKNNGVIP 535



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 164/332 (49%), Gaps = 5/332 (1%)

Query: 38  DLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK 96
           +L  AL+  +S SGEI +A +LF    + D  +WN+MI+     G + +A+ LF+  P K
Sbjct: 340 NLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEK 399

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
           +  +WS++I GY+ +    E   LF +MQL   RP +  L +V+  C+    L +G+  H
Sbjct: 400 DIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVH 459

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
            Y  K    +N  + T L+DMY KC C+  A  +F    + K   +W  +I G + NG  
Sbjct: 460 AYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEE-KGVSSWNALIIGLAVNGLV 518

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG-AQVHGCILSSGFEANVYVQSA 275
            ++++ F +M+  GV  N+ TF  +L AC  +   D G       I   G E NV     
Sbjct: 519 ERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGC 578

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEV-SWNSMIVGFARQGFHKEALSLFKKMHARDIKI 334
           ++D+  + G L+ A +L+E   +  +V +W +++    + G  +    + +K+       
Sbjct: 579 MVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDH 638

Query: 335 DDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           D F +  + N FAS  D  +   V  ++ + G
Sbjct: 639 DGF-HVLLSNIFASKGDWEDVLEVRGMMKQQG 669


>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
 gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
          Length = 586

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 249/594 (41%), Positives = 360/594 (60%), Gaps = 9/594 (1%)

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
            KA+E     R+    ++  T+  ++  C    A      VH  + S+G+E   ++ + L
Sbjct: 1   MKAMEAMHRNRLS---ADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTL 57

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           I+MY K G LD AR L +     N VSW +MI  ++    + +AL     M    ++ + 
Sbjct: 58  INMYVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNM 117

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
           +TY SVL        L N + +H  I+K G E   FV +ALID Y+K G    A  VFN 
Sbjct: 118 YTYSSVLRACDG---LLNLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNE 174

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
           M   D++ W S+I G A +   +E L  +  M+ +    D   ++S+L AC  L +LE G
Sbjct: 175 MITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELG 234

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT-RDVITWTALIMGCAQ 515
           +QVH   LK      L ++N+L+ +Y KCG + DAN +F  M T +DVI+W+ +I G AQ
Sbjct: 235 RQVHVHVLKYD--QDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQ 292

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
           NG   +AL+ ++ M ++G KP+YIT +G+LFACSHAGL  +  +YF+SM + +GI PG +
Sbjct: 293 NGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGRE 352

Query: 576 HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
           HY C+IDLLGR+GKL EA  L+ +M  EPDA  W+ LL ACRVH +++L   AA  + +L
Sbjct: 353 HYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKL 412

Query: 636 EPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG 695
           +P +A  Y+ LSN+Y+ + KWED A VR+ M++RG++K+PGCSW+E + QVH FI  D  
Sbjct: 413 DPADAGTYILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNS 472

Query: 696 HPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLP 755
           HP   +I  ++ +++  +   GYVPD NF L ++E E  E  L YHSEKLA+ FGL++LP
Sbjct: 473 HPRIEEIKRELSQLIQRLMRLGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLP 532

Query: 756 QGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
               I I KNLR+CGDCH   K +S +  R I++RD  R+HHF+ G CSCGDYW
Sbjct: 533 NQKTIHIRKNLRICGDCHIFAKLVSQLENRVIVIRDPIRYHHFRGGVCSCGDYW 586



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/385 (32%), Positives = 201/385 (52%), Gaps = 15/385 (3%)

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
           T   +++ C ++G +Q+    H +     ++   F++  L++MY K   + EA  LF   
Sbjct: 18  TYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEM 77

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
           PD +N V+WTTMI+ YS +    KA++    M  EGV  N +T+ S+L AC  +      
Sbjct: 78  PD-RNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNL--- 133

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
            Q+HG IL  G E++V+V+SALID Y+K G+   A  +       + V WNS+I GFA+ 
Sbjct: 134 RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQN 193

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
               E L L+K+M   D   D  T  SVL        L   + VH  ++K  ++    +N
Sbjct: 194 SDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILN 251

Query: 375 NALIDMYAKQGNLDCAFMVFN-LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
           NAL+DMY K G+L+ A ++F  +M +KDVISW+++I G A +G   +ALK F  M+  G 
Sbjct: 252 NALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGP 311

Query: 434 CPDHVVVSSILSACAELTVLEFG----QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
            P+++ +  +L AC+   ++  G    Q +   F    G         ++ +  + G ++
Sbjct: 312 KPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYG---CIIDLLGRAGKLD 368

Query: 490 DANRVFDSM-HTRDVITWTALIMGC 513
           +A ++   M H  D +TW  L+  C
Sbjct: 369 EAVKLIHEMNHEPDAVTWRILLGAC 393



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 186/358 (51%), Gaps = 9/358 (2%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  NT+I  Y   G L EA+ LF+E P +N  +W+++I  YSN  L+ +A +    M  E
Sbjct: 52  FLINTLINMYVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLRE 111

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G RP+ YT  +VLR C   GLL    Q HG  +K   + + FV + L+D Y+K     +A
Sbjct: 112 GVRPNMYTYSSVLRACD--GLLNL-RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDA 168

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F     G + V W ++I G++QN  G + +  ++ M+     ++Q T  S+L AC  
Sbjct: 169 LNVFNEMITG-DLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTG 227

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV-SWNS 306
           ++  + G QVH  +L   ++ ++ + +AL+DMY KCG L+ A  L      + +V SW++
Sbjct: 228 LALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWST 285

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKT 365
           MI G A+ GF  +AL LF+ M ++  K +  T   VL  C  + +  +      S+    
Sbjct: 286 MIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHF 345

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           G +  +     +ID+  + G LD A  ++  +  + D ++W  L+  C  H + + A+
Sbjct: 346 GIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAI 403



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 144/307 (46%), Gaps = 15/307 (4%)

Query: 4   LDFKILNFSLRCRSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMS 63
           L+ K L+F +    + + P  YT+         S + RA     N  ++   G + +   
Sbjct: 97  LNHKALDFLILMLREGVRPNMYTY---------SSVLRACDGLLNLRQLH--GSILKVGL 145

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           + D F  + +I  Y+  G   +A  +FNE    +   W+S+I G++      E   L+ +
Sbjct: 146 ESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKR 205

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+   +   Q TL +VLR C+   LL+ G Q H + +K  +D +  +   L+DMY KC  
Sbjct: 206 MKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGS 263

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A  LF      K+ ++W+TMI G +QNG+   A++ F  M+ +G + N  T   +L 
Sbjct: 264 LEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLF 323

Query: 244 ACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLL-EYSEIDNE 301
           AC+     + G      +    G +        +ID+  + G LD A +L+ E +   + 
Sbjct: 324 ACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDA 383

Query: 302 VSWNSMI 308
           V+W  ++
Sbjct: 384 VTWRILL 390


>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
 gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
          Length = 916

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 277/758 (36%), Positives = 422/758 (55%), Gaps = 16/758 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS-NYGLDIEAFELFW 122
           +RD F    ++ AY   G +  A ++F+     +   W++ I   + N      A  L  
Sbjct: 163 ERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVR 222

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           +M LEG  P++ +   +L  C     L      H    +  F  +  V T LV MY +C 
Sbjct: 223 RMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCG 282

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            + E+  +F+     +NHV+W  MI  ++Q G+   A   +  M+ EG   N+ TF + L
Sbjct: 283 SVDESIAVFEAMA-VRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTAL 341

Query: 243 TACAAVSARDFG--AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
            A  + S++D G  A +HG I  +G E +V V +AL+ MY   G +D AR   +     N
Sbjct: 342 KAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKN 401

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
            VSWN+M+  +   G  +EA+ LF  M  + +  +  +Y +VL C     D++ A+S+H+
Sbjct: 402 IVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCE---DVSEARSIHA 458

Query: 361 LIVKTG-FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
            +V  G F     + N ++ M+A+ G+L+ A   F+    KD +SW + +   +      
Sbjct: 459 EVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLH 518

Query: 420 EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSL 478
            A+  F  M+  G  PD   + S++  CA+L  LE G+ +      +      + V++++
Sbjct: 519 GAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAV 578

Query: 479 VLVYAKCGC-INDANRVFDSM--HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT- 534
           + + AKCG  +++  R+F  M    +D++ W  +I   AQ+G G++AL+ +  M  R + 
Sbjct: 579 MNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSV 638

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP-DHYACMIDLLGRSGKLIEA 593
           +PD  TFV +L  CSHAGL E+    F    +V GI+  P +HYAC++D+LGR G L EA
Sbjct: 639 RPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREA 698

Query: 594 KALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTA 653
           +  + +M    D+ VW +LL AC  +GDLE GERAA    EL   +++ YV LSN+Y+ A
Sbjct: 699 EDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAA 758

Query: 654 GKWEDAARVRKLMKSRGIRKE-PGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLL 712
           G+WED+ RVR+ M  R ++K  PG S +   ++VH F + DR HP   +IY++++ +  L
Sbjct: 759 GRWEDSIRVREDMAERRVKKRAPGKSSIVVKNRVHEFFARDRSHPQSDEIYAELERLKGL 818

Query: 713 IKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDC 772
           I+EAGYVPD    LH+VEEE KE  L YHSEKLA+AFGL+++P    IR+ KNLRVC DC
Sbjct: 819 IREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLRVCKDC 878

Query: 773 HTAMKYISAVYLRHIILRDSNRFHHF-KAGNCSCGDYW 809
           HTA K+I+ V  R I +RD NRFHHF K G CSCGDYW
Sbjct: 879 HTATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 916



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 127/508 (25%), Positives = 231/508 (45%), Gaps = 36/508 (7%)

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
           TL  +LR C     L +G Q H   +K     N  +   LV MY+KC+ + +A   F   
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD-- 252
              +    W T+I   S     F   + +  M++E    N+    +I+    A+++ D  
Sbjct: 86  -RSRGIATWNTLIAAQSSPAAVF---DLYTRMKLEERAENRPNRLTIIAVLGAIASGDPS 141

Query: 253 ----FGAQ---VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
                 AQ   VH  I  S  E +++V +AL+D Y KCG ++SA  +    ++ + + WN
Sbjct: 142 SSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWN 201

Query: 306 SMIVGFARQGFHKE-ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           + I+  A      + AL L ++M    +  +  ++ ++L+    +  L  A+S+H+ + +
Sbjct: 202 AAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEE 261

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            GF G   V  AL+ MY + G++D +  VF  M  ++ +SW ++I   A  G    A   
Sbjct: 262 LGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAI 321

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQ--VHAVFLKSGGCSSLSVDNSLVLVY 482
           +  M+  G  P+ +   + L A    +  + G+   +H     +G    + V  +LV +Y
Sbjct: 322 YWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMY 381

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
              G I+ A   FD++  +++++W A++     NG+ +EA++ +  M  +   P+ ++++
Sbjct: 382 GSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYL 441

Query: 543 GLLFACS--------HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAK 594
            +L  C         HA +  N  +  ES      I  G      ++ +  RSG L EA 
Sbjct: 442 AVLGCCEDVSEARSIHAEVVGNGLFAQES-----SIANG------VVRMFARSGSLEEAM 490

Query: 595 ALLDQMVGEPDATVWKALLSACRVHGDL 622
           A  D  V + D+  W   ++A     DL
Sbjct: 491 AAFDATVVK-DSVSWNTKVAALSAREDL 517



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 114/469 (24%), Positives = 196/469 (41%), Gaps = 84/469 (17%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           + ++G ID A   F+ +  ++  +WN M+ AY ++GR R                     
Sbjct: 381 YGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAR--------------------- 419

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT-CF 164
                     EA ELF  M+ +   P++ +   VL  C     +      H   +    F
Sbjct: 420 ----------EAMELFAAMKRQSLAPNKVSYLAVLGCCE---DVSEARSIHAEVVGNGLF 466

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
              + +  G+V M+A+   + EA   F      K+ V+W T +   S       AI  F 
Sbjct: 467 AQESSIANGVVRMFARSGSLEEAMAAFDATV-VKDSVSWNTKVAALSAREDLHGAITAFY 525

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKC 283
            M+ EG   ++FT  S++  CA +   + G  +   + ++   E +V V+SA+++M AKC
Sbjct: 526 TMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMNMVAKC 585

Query: 284 G-DLDSARRLLEYSEIDNE--VSWNSMIVGFARQGFHKEALSLFKKMHAR-DIKIDDFTY 339
           G  +D   RL      D +  V+WN+MI  +A+ G  ++AL LF+ M  R  ++ D  T+
Sbjct: 586 GSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTF 645

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM-- 397
            SVL+  +           H+ +V+ G                    + C F+   ++  
Sbjct: 646 VSVLSGCS-----------HAGLVEDG--------------------IHCFFLAREVLGI 674

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
           + + V  +  L+      G   EA  +   M +     D VV +S+L AC+    LE G+
Sbjct: 675 EQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPA---DSVVWTSLLGACSSYGDLEGGE 731

Query: 458 QVHAVFL---KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDV 503
           +    F+   +S     + + N    +YA  G   D+ RV + M  R V
Sbjct: 732 RAARAFIELYRSDSVGYVVLSN----IYAAAGRWEDSIRVREDMAERRV 776



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 14/198 (7%)

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
            ++ +L  C     L  G+Q+H   +K G   +  + N LV +Y+KC  ++DAN  F ++
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR---GTKPDYITFVGLLFACSHAGLAE 555
            +R + TW  LI   A           Y +M        +P+ +T + +L A +    + 
Sbjct: 86  RSRGIATWNTLI---AAQSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIASGDPSS 142

Query: 556 NARWYFESM---DKVYGIKPGPDHY--ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
           ++    ++    D + G     D +    ++D  G+ G  +E+   +   +  PD   W 
Sbjct: 143 SSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCG-CVESALEVFSRIQVPDLICWN 201

Query: 611 ALLSACRVHGDLELGERA 628
           A + AC   G+ E  +RA
Sbjct: 202 AAIMAC--AGNDERPDRA 217


>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Vitis vinifera]
          Length = 731

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 272/720 (37%), Positives = 389/720 (54%), Gaps = 63/720 (8%)

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           +Q     PSQ+ L            L++ +Q H + IKT F                   
Sbjct: 41  LQTPPTSPSQHDLST----------LEQTKQIHAHIIKTHFH------------------ 72

Query: 184 IFEAEYLFKMFPDGKNHVA-WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
               +     FP G +  A W  +IT Y++      A+  +  +R    E + F  PS+L
Sbjct: 73  -HALQIPLNDFPSGLSPSAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVL 131

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
            AC  VS    G ++HG +L  G + +V+V +AL+ MY +C  ++ AR + +     + V
Sbjct: 132 KACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVV 191

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SW++MI   +R      AL L ++M+   ++  +    S++N FA   ++   K++H+ +
Sbjct: 192 SWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYV 251

Query: 363 VKTGFEGYKFV--NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
           ++     +  V    AL+DMYAK G+L  A  +FN +  K V+SWT++I GC      EE
Sbjct: 252 IRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEE 311

Query: 421 A-------------------------------LKYFSDMRISGICPDHVVVSSILSACAE 449
           A                                  F  MR SG+ P  V + S+LS CA 
Sbjct: 312 ARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAV 371

Query: 450 LTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTAL 509
              L+ G+ VH+   K        ++ +LV +YAKCG IN A R+F    +RD+  W A+
Sbjct: 372 AGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAI 431

Query: 510 IMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG 569
           I G A +G G+EAL  + +M  +G KP+ ITF+GLL ACSHAGL    +  FE M   +G
Sbjct: 432 ITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFG 491

Query: 570 IKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAA 629
           + P  +HY CM+DLLGR+G L EA  ++  M  +P+  VW AL++ACR+H + +LGE AA
Sbjct: 492 LVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAA 551

Query: 630 NNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIF 689
             L E+EP N    V +SN+Y+ A +W DAA VRK MK+ G++KEPG S +E N  VH F
Sbjct: 552 TQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEF 611

Query: 690 ISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAF 749
           +  D+ HP    I   + E+   + EAGYVPD +  L N++EE KE  L YHSEKLA+AF
Sbjct: 612 LMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAF 671

Query: 750 GLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           GL++     PIRI KNLRVC DCH A K +S +Y R II+RD NRFHHF+ G CSCGDYW
Sbjct: 672 GLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 731



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 205/448 (45%), Gaps = 36/448 (8%)

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
           W+ +I  Y+       A  ++ Q++   +    +   +VL+ C      Q G++ HG+ +
Sbjct: 92  WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 151

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAI 220
           K   D + FV   L+ MY +C C+  A  +F    + ++ V+W+TMI   S+N     A+
Sbjct: 152 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMME-RDVVSWSTMIRSLSRNKEFDMAL 210

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL--SSGFEANVYVQSALID 278
           E  R+M    V  ++    S++   A  +    G  +H  ++  S+     V   +AL+D
Sbjct: 211 ELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLD 270

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKI---- 334
           MYAKCG L  AR+L         VSW +MI G  R    +EA +LF     RD+ I    
Sbjct: 271 MYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAM 330

Query: 335 ---------------------------DDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
                                         T  S+L+  A    L+  K VHS I K   
Sbjct: 331 LSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERV 390

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
           E    +N AL+DMYAK G+++ A  +F     +D+  W ++ITG A HG  EEAL  F++
Sbjct: 391 EVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAE 450

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS-GGCSSLSVDNSLVLVYAKCG 486
           M   G+ P+ +    +L AC+   ++  G+++    + + G    +     +V +  + G
Sbjct: 451 MERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAG 510

Query: 487 CINDANRVFDSMHTR-DVITWTALIMGC 513
            +++A+ +  SM  + + I W AL+  C
Sbjct: 511 LLDEAHEMIKSMPIKPNTIVWGALVAAC 538



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 184/399 (46%), Gaps = 44/399 (11%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS-NYGLD 114
           G + +K  DRD F  N ++  Y     +  A+ +F++   ++  +WS++I   S N   D
Sbjct: 148 GFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFD 207

Query: 115 IEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD--LNAFVVT 172
           + A EL  +M     RPS+  + +++ L +    ++ G+  H Y I+   +  +     T
Sbjct: 208 M-ALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTT 266

Query: 173 GLVDMYAKCKCIFEAEYLFK----------------------------MFPDGKNH--VA 202
            L+DMYAKC  +  A  LF                             +F   +N   + 
Sbjct: 267 ALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMI 326

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
           WT M++ Y+Q     +A   F  MR  GV   + T  S+L+ CA   A D G  VH  I 
Sbjct: 327 WTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYID 386

Query: 263 SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
               E +  + +AL+DMYAKCGD+++A RL   +   +   WN++I GFA  G+ +EAL 
Sbjct: 387 KERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALD 446

Query: 323 LFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNA----KSVHSLIVKTGFEGYKFVNNAL 377
           +F +M  + +K +D T+  +L+ C  + +         K VH+  +    E Y      +
Sbjct: 447 IFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHY----GCM 502

Query: 378 IDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYH 415
           +D+  + G LD A  +   M  K + I W +L+  C  H
Sbjct: 503 VDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLH 541


>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g13880-like [Cucumis sativus]
          Length = 839

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 275/749 (36%), Positives = 417/749 (55%), Gaps = 11/749 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N ++  Y   G  R A KLF++    N  T++SLI GY       +   LF + +  
Sbjct: 95  FLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRL 154

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G +  +YT    L  CS  G L  G+  HG  +         +   L+DMY+KC  +  A
Sbjct: 155 GLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYA 214

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             LF    D  + V+W ++I GY QNG   + +   + M   G+  N +T  S L AC++
Sbjct: 215 RILFD-HSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSS 273

Query: 248 V--SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
                + FG  +H   +  G   +V V +AL+DMYAK G LD A ++ +     N V +N
Sbjct: 274 NFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYN 333

Query: 306 SMIVGFARQGFHKE-----ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
           +M+ G  +Q   ++     AL+LF +M +  IK   FTY S+L       D   AK VH+
Sbjct: 334 AMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHA 393

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
           L+ K G    +++ + LID+Y+  G++  A + FN + +  ++  T++I G   +G +E 
Sbjct: 394 LMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFES 453

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
           AL  F ++      PD  + S+I+S+CA + +L  G+Q+     K G        NS + 
Sbjct: 454 ALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIW 513

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           +YAK G +  AN  F  M   D+++W+ +I   AQ+G   EAL+F++ M + G +P++  
Sbjct: 514 MYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFA 573

Query: 541 FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
           F+G+L ACSH GL E    YF++M+K Y +K    H  C++DLLGR+G+L +A++L+ ++
Sbjct: 574 FLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRL 633

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAA 660
             E +  +W+ALLSACR+H D    +R A  + ELEP+ +  YV L N+Y  AG    A+
Sbjct: 634 GFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAAS 693

Query: 661 RVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
           +VR LM+ R I+KEPG SW++   +V+ F+S DR H     IY+K+DE++   K      
Sbjct: 694 KVRTLMEERRIKKEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKRLDSAK 753

Query: 721 DMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYIS 780
           D+    + +E E     + YHSEKLAVAFG+L L + AP+R+ KNLR+C DCH  MK  S
Sbjct: 754 DI--LGYKIEHE-HLTNVNYHSEKLAVAFGVLYLSESAPVRVMKNLRICLDCHMTMKLFS 810

Query: 781 AVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            V  R +I+RDS RFHHFK G+CSCGDYW
Sbjct: 811 IVEKRELIVRDSVRFHHFKDGSCSCGDYW 839



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 153/483 (31%), Positives = 243/483 (50%), Gaps = 14/483 (2%)

Query: 147 GLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTM 206
           G L  G+  H + IKT F    F+   L++MY KC     A+ LF       N V + ++
Sbjct: 73  GKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKS-NIVTYNSL 131

Query: 207 ITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF 266
           I+GY Q     K +  F   R  G++ +++T    LTAC+       G  +HG IL  G 
Sbjct: 132 ISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGL 191

Query: 267 EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK 326
            + V + ++LIDMY+KCG +D AR L ++S+  + VSWNS+I G+ + G ++E L++ +K
Sbjct: 192 GSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQK 251

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAK----SVHSLIVKTGFEGYKFVNNALIDMYA 382
           MH   +  + +T  S L   +SN   N  K     +H   +K G      V  AL+DMYA
Sbjct: 252 MHQNGLAFNTYTLGSALKACSSN--FNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYA 309

Query: 383 KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE-----ALKYFSDMRISGICPDH 437
           K G+LD A  +F+ M DK+V+ + +++ G     + E+     AL  F +M+  GI P  
Sbjct: 310 KTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSM 369

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
              SS+L AC  +   +F +QVHA+  K+G  S   + + L+ +Y+  G + DA   F+S
Sbjct: 370 FTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNS 429

Query: 498 MHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENA 557
           +H   ++  TA+I G  QNG+ + AL  + ++L    KPD      ++ +C++ G+  + 
Sbjct: 430 IHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSG 489

Query: 558 RWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACR 617
                   KV GI          I +  +SG L  A     QM   PD   W  ++ +  
Sbjct: 490 EQIQGHATKV-GISRFTIFQNSQIWMYAKSGDLYAANLTFQQM-ENPDIVSWSTMICSNA 547

Query: 618 VHG 620
            HG
Sbjct: 548 QHG 550



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 142/496 (28%), Positives = 231/496 (46%), Gaps = 64/496 (12%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           L  +L+D +S  G++D A  LF+     DG +WN++IA Y  +G+               
Sbjct: 197 LTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYE------------- 243

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCS--LKGLLQRGEQF 155
                             E   +  +M   G   + YTL + L+ CS    G    G   
Sbjct: 244 ------------------ELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTML 285

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ--- 212
           H +AIK    L+  V T L+DMYAK   + +A  +F    D KN V +  M+ G  Q   
Sbjct: 286 HDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVD-KNVVMYNAMMAGLLQQET 344

Query: 213 --NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV 270
             +   +KA+  F +M+  G++ + FT+ S+L AC  V    F  QVH  +  +G  ++ 
Sbjct: 345 IEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDE 404

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNE--VSWNSMIVGFARQGFHKEALSLFKKMH 328
           Y+ S LID+Y+  G +  A  LL ++ I N   V   +MI G+ + G  + ALSLF ++ 
Sbjct: 405 YIGSILIDLYSVLGSMMDA--LLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELL 462

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD 388
             + K D+F   ++++  A+   L + + +     K G   +    N+ I MYAK G+L 
Sbjct: 463 TYEEKPDEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLY 522

Query: 389 CAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
            A + F  M++ D++SW+++I   A HG   EAL++F  M+  GI P+H     +L AC+
Sbjct: 523 AANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACS 582

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND----ANRVFD--SMHTR- 501
              ++E G +            ++  D  + L    C C+ D    A R+ D  S+  R 
Sbjct: 583 HRGLVEEGLRYF---------DTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRL 633

Query: 502 ----DVITWTALIMGC 513
               + + W AL+  C
Sbjct: 634 GFEHEPVMWRALLSAC 649



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 163/349 (46%), Gaps = 16/349 (4%)

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
           ++   Y  ++        LN+ K VHS ++KT F    F+ N L++MY K G+   A  +
Sbjct: 57  LESVDYVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKL 116

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           F+ M   +++++ SLI+G     + ++ +  F   R  G+  D    +  L+AC++   L
Sbjct: 117 FDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNL 176

Query: 454 EFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC 513
             G+ +H + L  G  S + + NSL+ +Y+KCG ++ A  +FD     D ++W +LI G 
Sbjct: 177 SAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGY 236

Query: 514 AQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPG 573
            QNGK +E L    +M   G   +  T    L ACS      N    F +M   + IK G
Sbjct: 237 VQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNF---NGCKMFGTMLHDHAIKLG 293

Query: 574 PDHY-----ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE--LGE 626
             H        ++D+  ++G L +A  + DQMV + +  ++ A+++       +E     
Sbjct: 294 L-HLDVVVGTALLDMYAKTGSLDDAIQIFDQMV-DKNVVMYNAMMAGLLQQETIEDKCAY 351

Query: 627 RAANNLFELEPMNAMP----YVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
           +A N  FE++     P    Y  L         ++ A +V  LM   G+
Sbjct: 352 KALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGL 400


>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
          Length = 742

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 255/669 (38%), Positives = 390/669 (58%), Gaps = 37/669 (5%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  + L+++L   +  G L R  +          D N F    L+   A  + + + E L
Sbjct: 46  PPTFLLNHLLTAYAKSGRLARARR----VFDEMPDPNLFTRNALLSALAHSRLVPDMERL 101

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILTACAAVS 249
           F   P+ ++ V++  +ITG+S  G   ++++ +R + R E V   + T  +++   +A+S
Sbjct: 102 FASMPE-RDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALS 160

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE------------ 297
            R  G  VH  +L  GF A  +V S L+DMYAK G +  ARR+ +  E            
Sbjct: 161 DRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLIT 220

Query: 298 ------------------IDNE-VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
                             +D + ++W +M+ G  + G   EAL +F++M A  + ID +T
Sbjct: 221 GLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYT 280

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
           + S+L    +   L   K +H+ I +T +E   FV +AL+DMY+K  ++  A  VF  M 
Sbjct: 281 FGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMT 340

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
            +++ISWT++I G   +   EEA++ FS+M++ GI PD   + S++S+CA L  LE G Q
Sbjct: 341 CRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQ 400

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK 518
            H + L SG    ++V N+LV +Y KCG I DA+R+FD M   D ++WTAL+ G AQ GK
Sbjct: 401 FHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGK 460

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA 578
            KE +  +++MLA G KPD +TF+G+L ACS AGL E    YF+SM K +GI P  DHY 
Sbjct: 461 AKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYT 520

Query: 579 CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM 638
           CMIDL  RSG+  EA+  + QM   PDA  W  LLS+CR+ G++E+G+ AA NL E +P 
Sbjct: 521 CMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQ 580

Query: 639 NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPL 698
           N   YV L +M++  G+W + A +R+ M+ R ++KEPGCSW++  ++VHIF ++D+ HP 
Sbjct: 581 NPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPF 640

Query: 699 RTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA 758
            + IY K++ +   + E GY PD++  LH+V +  K   +++HSEKLA+AFGL+ +PQ  
Sbjct: 641 SSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEM 700

Query: 759 PIRIFKNLR 767
           PIRI KNLR
Sbjct: 701 PIRIVKNLR 709



 Score =  275 bits (703), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 166/519 (31%), Positives = 270/519 (52%), Gaps = 39/519 (7%)

Query: 35  PASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP 94
           P   LN  L  ++ SG +  A ++F++M D + FT N +++A A+S  + + ++LF   P
Sbjct: 47  PTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMP 106

Query: 95  FKNFFTWSSLIYGYSNYGLDIEAFELFWQ-MQLEGYRPSQYTLDNVLRLCSLKGLLQRGE 153
            ++  ++++LI G+S+ G    + +L+   ++ E  RP++ TL  ++ + S       G 
Sbjct: 107 ERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGH 166

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAK-------------------------------CK 182
             H   ++  F   AFV + LVDMYAK                               CK
Sbjct: 167 SVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCK 226

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            I +A+ LF++  D ++ + WTTM+TG +QNG   +A++ FR MR EGV  +Q+TF SIL
Sbjct: 227 MIEDAKGLFQLMVD-RDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSIL 285

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           TAC A++A + G Q+H  I  + +E NV+V SAL+DMY+KC  +  A  +       N +
Sbjct: 286 TACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNII 345

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SW +MIVG+ +    +EA+  F +M    IK DDFT  SV++  A+   L      H L 
Sbjct: 346 SWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLA 405

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           + +G   Y  V+NAL+ +Y K G+++ A  +F+ M   D +SWT+L+TG A  G  +E +
Sbjct: 406 LVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETI 465

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS---LV 479
             F  M  +G+ PD V    +LSAC+   ++E G        K  G   + +D+    ++
Sbjct: 466 DLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGI--VPIDDHYTCMI 523

Query: 480 LVYAKCGCINDANRVFDSM-HTRDVITWTALIMGCAQNG 517
            +Y++ G   +A      M H+ D   W  L+  C   G
Sbjct: 524 DLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRG 562


>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
 gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
 gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
          Length = 856

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 288/816 (35%), Positives = 443/816 (54%), Gaps = 18/816 (2%)

Query: 12  SLRCRSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWN 71
           +LR  S I   +       +++ PA     AL D  ++  I  A      +        N
Sbjct: 41  ALRALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVAN 100

Query: 72  TMIAAYANSGRLREAKKLFNETP--FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGY 129
            ++ AYA  GRL  A ++F        +  +++SLI     +     A      M   G+
Sbjct: 101 ALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGH 160

Query: 130 RPSQYTLDNVLR----LCSLKGLLQRGEQFHGYAIKTCF--DLNAFVVTGLVDMYAKCKC 183
             + +TL +VLR    L +    ++ G + H +A+K         F    L+ MYA+   
Sbjct: 161 PLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGL 220

Query: 184 IFEAEYLFKMFPDGKNHV-AWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
           + +A+ LF     G+  V  W TM++   Q+G   +A++   DM   GV  +  TF S L
Sbjct: 221 VADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASAL 280

Query: 243 TACAAVSARDFGAQVHGCILSSG-FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
            AC+ +   D G ++H  ++      AN +V SAL+DMYA    +  AR++ +      +
Sbjct: 281 PACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGK 340

Query: 302 V--SWNSMIVGFARQGFHKEALSLFKKMHARDIKID-DFTYPSVLNCFASNIDLNNAKSV 358
               WN+MI G+A+ G  +EAL LF +M A    +  + T  SVL   A +      ++V
Sbjct: 341 QLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAV 400

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           H  +VK G  G +FV NAL+DMYA+ G  D A  +F ++   DV+SW +LITGC   G  
Sbjct: 401 HGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHV 460

Query: 419 EEALKYFSDMRI---SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
            +A +   +M+     G+ P+ + + ++L  CA L     G+++H   ++    + ++V 
Sbjct: 461 ADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVG 520

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG-T 534
           ++LV +YAKCGC+  +  VFD +  R+ ITW  LIM    +G G EA   +D+M A G  
Sbjct: 521 SALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEA 580

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAK 594
           +P+ +TF+  L ACSH+G+ +     F +M++ +G++P PD  AC++D+LGR+G+L EA 
Sbjct: 581 RPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAY 640

Query: 595 ALLDQM-VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTA 653
           A++  M  GE   + W  +L ACR+H ++ LGE A   L ELEP  A  YV L N+YS A
Sbjct: 641 AMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAA 700

Query: 654 GKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLI 713
           G+W  AA VR  M+ RG+ KEPGCSW+E +  +H F++ +  HP   ++++ ++ +   +
Sbjct: 701 GQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEM 760

Query: 714 KEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCH 773
              GY PD +  LH++++  K   L  HSEKLA+AFGLL    GA IR+ KNLRVC DCH
Sbjct: 761 VARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCH 820

Query: 774 TAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            A K++S +  R I+LRD  RFHHF+ G CSCGDYW
Sbjct: 821 EAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 856



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 118/259 (45%), Gaps = 16/259 (6%)

Query: 315 GFHKEALSLFKK--MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF--EGY 370
           G H  AL       M +   ++D    P  +   A+  D  +A+++H+  ++ G      
Sbjct: 36  GNHAAALRALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPS 95

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDK--DVISWTSLITGCAYHGSYEEALKYFSDM 428
             V NAL+  YA+ G L  A  VF  + D   D +S+ SLI+       ++ AL     M
Sbjct: 96  PAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAM 155

Query: 429 RISGICPDHVVVSSILSACAEL----TVLEFGQQVHAVFLKSG---GCSSLSVDNSLVLV 481
              G       + S+L A + L      +  G++ HA  LK+G   G    +  N+L+ +
Sbjct: 156 LAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAF-NALLSM 214

Query: 482 YAKCGCINDANRVFDSMHT--RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
           YA+ G + DA R+F        DV+TW  ++    Q+G   EA+Q    M+A G +PD +
Sbjct: 215 YARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGV 274

Query: 540 TFVGLLFACSHAGLAENAR 558
           TF   L ACS   L +  R
Sbjct: 275 TFASALPACSRLELLDVGR 293



 Score = 41.2 bits (95), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 119/304 (39%), Gaps = 49/304 (16%)

Query: 416 GSYEEALKYFSDMRISGICP--DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC--SS 471
           G++  AL+  S + ++      DH  +   + + A L      + +HA  L+ G     S
Sbjct: 36  GNHAAALRALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPS 95

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSM--HTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
            +V N+L+  YA+CG +  A  VF S+     D +++ +LI       +   AL     M
Sbjct: 96  PAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAM 155

Query: 530 LARGTKPDYITFVGLLFACSHAGLAENA---------------------RWYFESMDKVY 568
           LA G      T V +L A SH   A  A                     R+ F ++  +Y
Sbjct: 156 LAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMY 215

Query: 569 --------------GIKPGPDH---YACMIDLLGRSGKLIEAKALLDQMVG---EPDATV 608
                         G  PG      +  M+ +L +SG   EA   L  MV     PD   
Sbjct: 216 ARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVT 275

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYV--QLSNMYSTAGKWEDAARVRKLM 666
           + + L AC     L++G      + + + + A  +V   L +MY+T  +   A +V  ++
Sbjct: 276 FASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMV 335

Query: 667 KSRG 670
              G
Sbjct: 336 PDSG 339


>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
 gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
          Length = 854

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 288/816 (35%), Positives = 443/816 (54%), Gaps = 18/816 (2%)

Query: 12  SLRCRSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWN 71
           +LR  S I   +       +++ PA     AL D  ++  I  A      +        N
Sbjct: 39  ALRALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVAN 98

Query: 72  TMIAAYANSGRLREAKKLFNETP--FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGY 129
            ++ AYA  GRL  A ++F        +  +++SLI     +     A      M   G+
Sbjct: 99  ALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGH 158

Query: 130 RPSQYTLDNVLR----LCSLKGLLQRGEQFHGYAIKTCF--DLNAFVVTGLVDMYAKCKC 183
             + +TL +VLR    L +    ++ G + H +A+K         F    L+ MYA+   
Sbjct: 159 PLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGL 218

Query: 184 IFEAEYLFKMFPDGKNHV-AWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
           + +A+ LF     G+  V  W TM++   Q+G   +A++   DM   GV  +  TF S L
Sbjct: 219 VADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASAL 278

Query: 243 TACAAVSARDFGAQVHGCILSSG-FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
            AC+ +   D G ++H  ++      AN +V SAL+DMYA    +  AR++ +      +
Sbjct: 279 PACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGK 338

Query: 302 V--SWNSMIVGFARQGFHKEALSLFKKMHARDIKID-DFTYPSVLNCFASNIDLNNAKSV 358
               WN+MI G+A+ G  +EAL LF +M A    +  + T  SVL   A +      ++V
Sbjct: 339 QLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAV 398

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           H  +VK G  G +FV NAL+DMYA+ G  D A  +F ++   DV+SW +LITGC   G  
Sbjct: 399 HGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHV 458

Query: 419 EEALKYFSDMRI---SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
            +A +   +M+     G+ P+ + + ++L  CA L     G+++H   ++    + ++V 
Sbjct: 459 ADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVG 518

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG-T 534
           ++LV +YAKCGC+  +  VFD +  R+ ITW  LIM    +G G EA   +D+M A G  
Sbjct: 519 SALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEA 578

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAK 594
           +P+ +TF+  L ACSH+G+ +     F +M++ +G++P PD  AC++D+LGR+G+L EA 
Sbjct: 579 RPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAY 638

Query: 595 ALLDQM-VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTA 653
           A++  M  GE   + W  +L ACR+H ++ LGE A   L ELEP  A  YV L N+YS A
Sbjct: 639 AMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAA 698

Query: 654 GKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLI 713
           G+W  AA VR  M+ RG+ KEPGCSW+E +  +H F++ +  HP   ++++ ++ +   +
Sbjct: 699 GQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEM 758

Query: 714 KEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCH 773
              GY PD +  LH++++  K   L  HSEKLA+AFGLL    GA IR+ KNLRVC DCH
Sbjct: 759 VARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCH 818

Query: 774 TAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            A K++S +  R I+LRD  RFHHF+ G CSCGDYW
Sbjct: 819 EAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 118/259 (45%), Gaps = 16/259 (6%)

Query: 315 GFHKEALSLFKK--MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF--EGY 370
           G H  AL       M +   ++D    P  +   A+  D  +A+++H+  ++ G      
Sbjct: 34  GNHAAALRALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPS 93

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDK--DVISWTSLITGCAYHGSYEEALKYFSDM 428
             V NAL+  YA+ G L  A  VF  + D   D +S+ SLI+       ++ AL     M
Sbjct: 94  PAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAM 153

Query: 429 RISGICPDHVVVSSILSACAEL----TVLEFGQQVHAVFLKSG---GCSSLSVDNSLVLV 481
              G       + S+L A + L      +  G++ HA  LK+G   G    +  N+L+ +
Sbjct: 154 LAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAF-NALLSM 212

Query: 482 YAKCGCINDANRVFDSMHT--RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
           YA+ G + DA R+F        DV+TW  ++    Q+G   EA+Q    M+A G +PD +
Sbjct: 213 YARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGV 272

Query: 540 TFVGLLFACSHAGLAENAR 558
           TF   L ACS   L +  R
Sbjct: 273 TFASALPACSRLELLDVGR 291



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 119/304 (39%), Gaps = 49/304 (16%)

Query: 416 GSYEEALKYFSDMRISGICP--DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC--SS 471
           G++  AL+  S + ++      DH  +   + + A L      + +HA  L+ G     S
Sbjct: 34  GNHAAALRALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPS 93

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSM--HTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
            +V N+L+  YA+CG +  A  VF S+     D +++ +LI       +   AL     M
Sbjct: 94  PAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAM 153

Query: 530 LARGTKPDYITFVGLLFACSHAGLAENA---------------------RWYFESMDKVY 568
           LA G      T V +L A SH   A  A                     R+ F ++  +Y
Sbjct: 154 LAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMY 213

Query: 569 --------------GIKPGPDH---YACMIDLLGRSGKLIEAKALLDQMVG---EPDATV 608
                         G  PG      +  M+ +L +SG   EA   L  MV     PD   
Sbjct: 214 ARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVT 273

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYV--QLSNMYSTAGKWEDAARVRKLM 666
           + + L AC     L++G      + + + + A  +V   L +MY+T  +   A +V  ++
Sbjct: 274 FASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMV 333

Query: 667 KSRG 670
              G
Sbjct: 334 PDSG 337


>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
          Length = 854

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 288/816 (35%), Positives = 443/816 (54%), Gaps = 18/816 (2%)

Query: 12  SLRCRSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWN 71
           +LR  S I   +       +++ PA     AL D  ++  I  A      +        N
Sbjct: 39  ALRALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVAN 98

Query: 72  TMIAAYANSGRLREAKKLFNETP--FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGY 129
            ++ AYA  GRL  A ++F        +  +++SLI     +     A      M   G+
Sbjct: 99  ALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGH 158

Query: 130 RPSQYTLDNVLR----LCSLKGLLQRGEQFHGYAIKTCF--DLNAFVVTGLVDMYAKCKC 183
             + +TL +VLR    L +    ++ G + H +A+K         F    L+ MYA+   
Sbjct: 159 PLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGL 218

Query: 184 IFEAEYLFKMFPDGKNHV-AWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
           + +A+ LF     G+  V  W TM++   Q+G   +A++   DM   GV  +  TF S L
Sbjct: 219 VADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASAL 278

Query: 243 TACAAVSARDFGAQVHGCILSSG-FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
            AC+ +   D G ++H  ++      AN +V SAL+DMYA    +  AR++ +      +
Sbjct: 279 PACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGK 338

Query: 302 V--SWNSMIVGFARQGFHKEALSLFKKMHARDIKID-DFTYPSVLNCFASNIDLNNAKSV 358
               WN+MI G+A+ G  +EAL LF +M A    +  + T  SVL   A +      ++V
Sbjct: 339 QLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAV 398

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           H  +VK G  G +FV NAL+DMYA+ G  D A  +F ++   DV+SW +LITGC   G  
Sbjct: 399 HGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHV 458

Query: 419 EEALKYFSDMRI---SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
            +A +   +M+     G+ P+ + + ++L  CA L     G+++H   ++    + ++V 
Sbjct: 459 ADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVG 518

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG-T 534
           ++LV +YAKCGC+  +  VFD +  R+ ITW  LIM    +G G EA   +D+M A G  
Sbjct: 519 SALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEA 578

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAK 594
           +P+ +TF+  L ACSH+G+ +     F +M++ +G++P PD  AC++D+LGR+G+L EA 
Sbjct: 579 RPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAY 638

Query: 595 ALLDQM-VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTA 653
           A++  M  GE   + W  +L ACR+H ++ LGE A   L ELEP  A  YV L N+YS A
Sbjct: 639 AMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAA 698

Query: 654 GKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLI 713
           G+W  AA VR  M+ RG+ KEPGCSW+E +  +H F++ +  HP   ++++ ++ +   +
Sbjct: 699 GQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEM 758

Query: 714 KEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCH 773
              GY PD +  LH++++  K   L  HSEKLA+AFGLL    GA IR+ KNLRVC DCH
Sbjct: 759 VARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCH 818

Query: 774 TAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            A K++S +  R I+LRD  RFHHF+ G CSCGDYW
Sbjct: 819 EAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 118/259 (45%), Gaps = 16/259 (6%)

Query: 315 GFHKEALSLFKK--MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF--EGY 370
           G H  AL       M +   ++D    P  +   A+  D  +A+++H+  ++ G      
Sbjct: 34  GNHAAALRALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPS 93

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDK--DVISWTSLITGCAYHGSYEEALKYFSDM 428
             V NAL+  YA+ G L  A  VF  + D   D +S+ SLI+       ++ AL     M
Sbjct: 94  PAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAM 153

Query: 429 RISGICPDHVVVSSILSACAEL----TVLEFGQQVHAVFLKSG---GCSSLSVDNSLVLV 481
              G       + S+L A + L      +  G++ HA  LK+G   G    +  N+L+ +
Sbjct: 154 LAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAF-NALLSM 212

Query: 482 YAKCGCINDANRVFDSMHT--RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
           YA+ G + DA R+F        DV+TW  ++    Q+G   EA+Q    M+A G +PD +
Sbjct: 213 YARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGV 272

Query: 540 TFVGLLFACSHAGLAENAR 558
           TF   L ACS   L +  R
Sbjct: 273 TFASALPACSRLELLDVGR 291



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 119/304 (39%), Gaps = 49/304 (16%)

Query: 416 GSYEEALKYFSDMRISGICP--DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC--SS 471
           G++  AL+  S + ++      DH  +   + + A L      + +HA  L+ G     S
Sbjct: 34  GNHAAALRALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPS 93

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSM--HTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
            +V N+L+  YA+CG +  A  VF S+     D +++ +LI       +   AL     M
Sbjct: 94  PAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAM 153

Query: 530 LARGTKPDYITFVGLLFACSHAGLAENA---------------------RWYFESMDKVY 568
           LA G      T V +L A SH   A  A                     R+ F ++  +Y
Sbjct: 154 LAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMY 213

Query: 569 --------------GIKPGPDH---YACMIDLLGRSGKLIEAKALLDQMVG---EPDATV 608
                         G  PG      +  M+ +L +SG   EA   L  MV     PD   
Sbjct: 214 ARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVT 273

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYV--QLSNMYSTAGKWEDAARVRKLM 666
           + + L AC     L++G      + + + + A  +V   L +MY+T  +   A +V  ++
Sbjct: 274 FASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMV 333

Query: 667 KSRG 670
              G
Sbjct: 334 PDSG 337


>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Brachypodium distachyon]
          Length = 804

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 269/721 (37%), Positives = 404/721 (56%), Gaps = 78/721 (10%)

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK-NHVAWTTMITGYSQNGYGFKAIECF 223
           D      T LV  YA    + ++   F   P  + + V    MI+ +++      A+  F
Sbjct: 86  DPGPVAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVF 145

Query: 224 RDMRV--EGVESNQFTFPSILTACAAVS--ARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           R +    + +  + ++F S+L+A   +   A     Q+H  +   G  A + V +ALI +
Sbjct: 146 RSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIAL 205

Query: 280 YAKC----------------------------------GDLDSARRLLEYSEIDNE--VS 303
           Y KC                                  GD+ +AR   E  EID E  V 
Sbjct: 206 YMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFE--EIDGEFDVV 263

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN+MI G+ + G   EA  LF++M ++ I  D+FT+ S+L+  A+     + KSVH   +
Sbjct: 264 WNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFI 323

Query: 364 KTGF----EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTS------------ 407
           +       E    VNNAL+ +Y+K G +  A  +F+ M  KDV+SW +            
Sbjct: 324 RLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLD 383

Query: 408 -------------------LITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
                              +++G  + G  E+ALK F+ MR   + P     +  ++AC 
Sbjct: 384 NAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACG 443

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
           EL  L+ G+Q+HA  ++ G  +S S  N+L+ +YA+CG + DA  VF  M   D ++W A
Sbjct: 444 ELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNA 503

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
           +I    Q+G G+EAL+ +DQM+A+G  PD I+F+ +L AC+HAGL ++   YFESM++ +
Sbjct: 504 MISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDF 563

Query: 569 GIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
           GI PG DHYA +IDLLGR+G++ EA+ L+  M  EP   +W+A+LS CR++GD+ELG  A
Sbjct: 564 GISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYA 623

Query: 629 ANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHI 688
           A+ LF++ P +   Y+ LSN YS AG+W DAARVRKLM+ RG++KEPGCSW+E  ++VH+
Sbjct: 624 ADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHV 683

Query: 689 FISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVA 748
           F+  D  HP   ++Y  ++ +   +++ GYVPD  FAL ++    KE  L  HSE+LAV+
Sbjct: 684 FLVGDTKHPDAHEVYRFLEMVGAKMRKLGYVPDTKFALQDMAPHEKEYVLFAHSERLAVS 743

Query: 749 FGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDY 808
           FGLL LP GA + + KNL++CGDCHTAM ++S    R I++RD  RFHHFK G CSCG+Y
Sbjct: 744 FGLLKLPAGATVTVLKNLKICGDCHTAMMFMSRAVGREIVVRDVRRFHHFKDGECSCGNY 803

Query: 809 W 809
           W
Sbjct: 804 W 804



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 149/575 (25%), Positives = 241/575 (41%), Gaps = 98/575 (17%)

Query: 41  RALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF--KNF 98
           R L  ++ S ++     LF   +D       ++++AYA +GRLR++   F+  P   ++ 
Sbjct: 65  RLLHLYTLSPDLATPAVLFR--ADPGPVAATSLVSAYAVAGRLRDSAAFFDSVPVARRDT 122

Query: 99  FTWSSLIYGYSNYGLDIEAFELFWQMQL--EGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
              +++I  ++   L   A  +F  +    +  RP  Y         S   LL    Q H
Sbjct: 123 VLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPDDY---------SFTSLLSAVGQMH 173

Query: 157 GYAIKTCFDLNAF-----------VVTGLVDMYAKCKC---IFEAEYLFKMFP------- 195
             A+  C  L+             V   L+ +Y KC       +A  +    P       
Sbjct: 174 DLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTW 233

Query: 196 -----------------------DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
                                  DG+  V W  MI+GY Q+G   +A E FR M  + + 
Sbjct: 234 TTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIP 293

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCI--LSSGF--EANVYVQSALIDMYAKCGD--- 285
            ++FTF S+L+ACA       G  VHG    L   F  EA + V +AL+ +Y+K G    
Sbjct: 294 PDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAV 353

Query: 286 ----------------------------LDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
                                       LD+A R+ +     +E+SW  M+ G+   G  
Sbjct: 354 ATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLA 413

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
           ++AL LF +M + D+K  D+TY   +        L + K +H+ +V+ GFE      NAL
Sbjct: 414 EDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNAL 473

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           + MYA+ G +  A +VF +M + D +SW ++I+    HG   EAL+ F  M   GI PD 
Sbjct: 474 LTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDR 533

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLVLVYAKCGCINDANRVF 495
           +   +IL+AC    +++ G Q      +  G S    D+   L+ +  + G I +A  + 
Sbjct: 534 ISFLTILTACNHAGLVDDGFQYFESMERDFGISP-GEDHYARLIDLLGRAGRIGEARDLI 592

Query: 496 DSMHTRDV-ITWTALIMGCAQNGKGKEALQFYDQM 529
            +M        W A++ GC  NG  +      DQ+
Sbjct: 593 KTMPFEPTPAIWEAILSGCRINGDMELGAYAADQL 627



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 111/436 (25%), Positives = 196/436 (44%), Gaps = 62/436 (14%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS 109
           G   +A ++ ++M ++D  TW T++  +   G +  A+  F E   +    W+++I GY 
Sbjct: 213 GVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYV 272

Query: 110 NYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDL--- 166
             G+  EAFELF +M  +   P ++T  ++L  C+  G    G+  HG  I+   D    
Sbjct: 273 QSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPE 332

Query: 167 ------NAFVV--------------------------TGLVDMYAKCKCIFEAEYLFKMF 194
                 NA V                             ++  Y +  C+  A  +FK  
Sbjct: 333 AALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEM 392

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
           P  K+ ++W  M++GY   G    A++ F  MR E V+   +T+   + AC  + A   G
Sbjct: 393 P-YKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHG 451

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
            Q+H  ++  GFEA+    +AL+ MYA+CG +  AR +       + VSWN+MI    + 
Sbjct: 452 KQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQH 511

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
           G  +EAL LF +M A+ I  D  ++ ++L   A N         H+ +V  GF+ ++ + 
Sbjct: 512 GHGREALELFDQMVAQGIYPDRISFLTILT--ACN---------HAGLVDDGFQYFESME 560

Query: 375 N------------ALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEA 421
                         LID+  + G +  A  +   M  +   + W ++++GC  +G  E  
Sbjct: 561 RDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDME-- 618

Query: 422 LKYFSDMRISGICPDH 437
           L  ++  ++  + P+H
Sbjct: 619 LGAYAADQLFKMVPEH 634



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 149/278 (53%), Gaps = 4/278 (1%)

Query: 36  ASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP 94
           A  +N ALV  +S SG+I  A ++F+ M+ +D  +WNT+++ Y  SG L  A ++F E P
Sbjct: 334 ALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMP 393

Query: 95  FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ 154
           +K+  +W  ++ GY + GL  +A +LF QM+ E  +P  YT    +  C   G L+ G+Q
Sbjct: 394 YKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQ 453

Query: 155 FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
            H + ++  F+ +      L+ MYA+C  + +A  +F + P+  + V+W  MI+   Q+G
Sbjct: 454 LHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPN-VDSVSWNAMISALGQHG 512

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQ 273
           +G +A+E F  M  +G+  ++ +F +ILTAC      D G Q    +    G        
Sbjct: 513 HGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHY 572

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIVG 310
           + LID+  + G +  AR L++    +   + W +++ G
Sbjct: 573 ARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSG 610


>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g03880, mitochondrial; Flags: Precursor
 gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 247/592 (41%), Positives = 366/592 (61%), Gaps = 5/592 (0%)

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           +A++    ++  G+ ++  T+  ++  C +  A   G  +   +  +G    +++ + LI
Sbjct: 44  RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
           +MY K   L+ A +L +     N +SW +MI  +++   H++AL L   M   +++ + +
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           TY SVL    S   +++ + +H  I+K G E   FV +ALID++AK G  + A  VF+ M
Sbjct: 164 TYSSVLR---SCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
              D I W S+I G A +   + AL+ F  M+ +G   +   ++S+L AC  L +LE G 
Sbjct: 221 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 280

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
           Q H   +K      L ++N+LV +Y KCG + DA RVF+ M  RDVITW+ +I G AQNG
Sbjct: 281 QAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG 338

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY 577
             +EAL+ +++M + GTKP+YIT VG+LFACSHAGL E+  +YF SM K+YGI P  +HY
Sbjct: 339 YSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY 398

Query: 578 ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEP 637
            CMIDLLG++GKL +A  LL++M  EPDA  W+ LL ACRV  ++ L E AA  +  L+P
Sbjct: 399 GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDP 458

Query: 638 MNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHP 697
            +A  Y  LSN+Y+ + KW+    +R  M+ RGI+KEPGCSW+E N Q+H FI  D  HP
Sbjct: 459 EDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHP 518

Query: 698 LRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQG 757
              ++  K+++++  +   GYVP+ NF L ++E E  E  L +HSEKLA+AFGL+TLP  
Sbjct: 519 QIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIE 578

Query: 758 APIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             IRI KNLR+CGDCH   K  S + +R I++RD  R+HHF+ G CSCGDYW
Sbjct: 579 KVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 191/380 (50%), Gaps = 10/380 (2%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N +I  Y     L +A +LF++ P +N  +W+++I  YS   +  +A EL   M  +
Sbjct: 97  FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
             RP+ YT  +VLR C+    +      H   IK   + + FV + L+D++AK     +A
Sbjct: 157 NVRPNVYTYSSVLRSCN---GMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDA 213

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F     G + + W ++I G++QN     A+E F+ M+  G  + Q T  S+L AC  
Sbjct: 214 LSVFDEMVTG-DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG 272

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           ++  + G Q H  I+   ++ ++ + +AL+DMY KCG L+ A R+    +  + ++W++M
Sbjct: 273 LALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTM 330

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTG 366
           I G A+ G+ +EAL LF++M +   K +  T   VL  C  + +  +      S+    G
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 390

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALKYF 425
            +  +     +ID+  K G LD A  + N M+ + D ++W +L+  C    +    L  +
Sbjct: 391 IDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNM--VLAEY 448

Query: 426 SDMRISGICPDHVVVSSILS 445
           +  ++  + P+     ++LS
Sbjct: 449 AAKKVIALDPEDAGTYTLLS 468



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 150/307 (48%), Gaps = 6/307 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           + D F  + +I  +A  G   +A  +F+E    +   W+S+I G++       A ELF +
Sbjct: 191 ESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKR 250

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+  G+   Q TL +VLR C+   LL+ G Q H + +K  +D +  +   LVDMY KC  
Sbjct: 251 MKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGS 308

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A  +F    + ++ + W+TMI+G +QNGY  +A++ F  M+  G + N  T   +L 
Sbjct: 309 LEDALRVFNQMKE-RDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLF 367

Query: 244 ACAAVSARDFGAQVHGCILS-SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NE 301
           AC+     + G      +    G +        +ID+  K G LD A +LL   E + + 
Sbjct: 368 ACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDA 427

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           V+W +++     Q     A    KK+ A D + D  TY  + N +A++   ++ + + + 
Sbjct: 428 VTWRTLLGACRVQRNMVLAEYAAKKVIALDPE-DAGTYTLLSNIYANSQKWDSVEEIRTR 486

Query: 362 IVKTGFE 368
           +   G +
Sbjct: 487 MRDRGIK 493



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/300 (22%), Positives = 127/300 (42%), Gaps = 41/300 (13%)

Query: 407 SLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
           S  T   Y      A+K    ++  G+  D    S ++  C     +  G  +      +
Sbjct: 31  SEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFN 90

Query: 467 GGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFY 526
           G    + + N L+ +Y K   +NDA+++FD M  R+VI+WT +I   ++    ++AL+  
Sbjct: 91  GHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELL 150

Query: 527 DQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGR 586
             ML    +P+  T+  +L +C+  G+++    +   + +  G++      + +ID+  +
Sbjct: 151 VLMLRDNVRPNVYTYSSVLRSCN--GMSDVRMLHCGIIKE--GLESDVFVRSALIDVFAK 206

Query: 587 SGKLIEAKALLDQMVGEPDATVWKAL---------------------------------- 612
            G+  +A ++ D+MV   DA VW ++                                  
Sbjct: 207 LGEPEDALSVFDEMV-TGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTS 265

Query: 613 -LSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
            L AC     LELG +A  ++ + +  + +    L +MY   G  EDA RV   MK R +
Sbjct: 266 VLRACTGLALLELGMQAHVHIVKYD-QDLILNNALVDMYCKCGSLEDALRVFNQMKERDV 324



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 35/172 (20%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           LN ALVD +   G +++A ++F +M +RD  TW+TMI+  A +G  +EA KLF       
Sbjct: 295 LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFE------ 348

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                                    +M+  G +P+  T+  VL  CS  GLL+ G  ++ 
Sbjct: 349 -------------------------RMKSSGTKPNYITIVGVLFACSHAGLLEDG-WYYF 382

Query: 158 YAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
            ++K  + ++        ++D+  K   + +A  L        + V W T++
Sbjct: 383 RSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434


>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
           [Vitis vinifera]
          Length = 707

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 260/645 (40%), Positives = 390/645 (60%), Gaps = 10/645 (1%)

Query: 174 LVDMYAKCKCIFEAEYLFKMF-------PDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
           L+ +Y+K   +  A  LF              N     TM+  Y+  G  ++AI+ +  M
Sbjct: 64  LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYM 123

Query: 227 RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDL 286
           +  GV  N FT+P +L  CA+     FG  VHG ++ +GF ++++V++AL+DMYAKCG++
Sbjct: 124 QRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEI 183

Query: 287 DSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCF 346
             A  + +   I + V W +MI  + +     +AL LF+KM       D+ T  SV +  
Sbjct: 184 GDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAV 243

Query: 347 ASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWT 406
               D   A SVH   V  GF G   V N+++ MYAK GN++ A +VF+ M++++ ISW 
Sbjct: 244 GQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWN 303

Query: 407 SLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
           S+++G   +G   +AL  F+ M+ S   P+ V    ++SAC+ L     G+++H   + S
Sbjct: 304 SMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISS 363

Query: 467 GGCSSLSVDNSLVLVYAKCGCINDANRVFDS--MHTRDVITWTALIMGCAQNGKGKEALQ 524
                 ++ N+++ +Y KCG ++ A  +F++  +  RDV +W  LI G   +G GKEAL+
Sbjct: 364 KMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALE 423

Query: 525 FYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLL 584
            + +M   G +P+ ITF  +L ACSHAGL +  R  F  M K+  ++P   HYACM+D+L
Sbjct: 424 LFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKL-SVRPEMKHYACMVDML 482

Query: 585 GRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYV 644
           GR+G L EA  L+ ++   P   VW ALL ACR+HG+ ELGE AANNLF+LEP +   YV
Sbjct: 483 GRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYV 542

Query: 645 QLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYS 704
            +SN+Y+ + KW++   VR+ MKSRG++K    S +E  ++VH F + D+  P   ++Y 
Sbjct: 543 LMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYR 602

Query: 705 KIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFK 764
           K++ + + +K  GYVPD++  LH+VE E KE  L YHSEKLAVAFG++ + QG PI++ K
Sbjct: 603 KVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTK 662

Query: 765 NLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           NLRVC DCH A K+IS++Y R II+RD NRFHHF+ G CSCGDYW
Sbjct: 663 NLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 707



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 143/457 (31%), Positives = 242/457 (52%), Gaps = 14/457 (3%)

Query: 73  MIAAYANSGRLREAKKLFNE--------TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           +I  Y+  G L  A+ LF+         T   N F  ++++  Y+N G   EA +L+  M
Sbjct: 64  LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYM 123

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
           Q  G   + +T   VL++C+ +     GE  HG  ++T F  + FV   LVDMYAKC  I
Sbjct: 124 QRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEI 183

Query: 185 FEAEYLF-KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
            +A  +F +M    ++ V WT MIT Y Q     KA+  FR M+ EG   ++ T  S+ +
Sbjct: 184 GDAHEVFDRMLI--RDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVAS 241

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           A   +        VHG  + +GF  +V V ++++ MYAKCG+++ AR + +  E  N +S
Sbjct: 242 AVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGIS 301

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WNSM+ G+ + G   +ALSLF +M A +   +  T   +++  +     +  + +H+ ++
Sbjct: 302 WNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVI 361

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN--LMQDKDVISWTSLITGCAYHGSYEEA 421
            +  +    + NA++DMY K G+LD A  +FN   + ++DV SW  LI+G   HG  +EA
Sbjct: 362 SSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEA 421

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           L+ FS M++ G+ P+ +  +SILSAC+   +++ G++  A   K      +     +V +
Sbjct: 422 LELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDM 481

Query: 482 YAKCGCINDANRVFDSMHTRDV-ITWTALIMGCAQNG 517
             + G +N+A R+   + +R     W AL++ C  +G
Sbjct: 482 LGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHG 518



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 204/434 (47%), Gaps = 31/434 (7%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           GQ+       D F    ++  YA  G + +A ++F+    ++   W+++I  Y      +
Sbjct: 156 GQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPL 215

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           +A  LF +MQ EG+   + T  +V       G  +     HGYA+   F  +  V   +V
Sbjct: 216 KALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIV 275

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
            MYAKC  +  A  +F    + +N ++W +M++GY+QNG    A+  F  M+    + N 
Sbjct: 276 GMYAKCGNVERARLVFDRMEE-RNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNP 334

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            T   +++AC+ + ++  G ++H  ++SS  + +  +++A++DMY KCGDLD+A  +   
Sbjct: 335 VTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNN 394

Query: 296 SEIDNE--VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
            E+      SWN +I G+   G  KEAL LF +M    ++ +D T+ S+L+  +    ++
Sbjct: 395 CELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLID 454

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGC 412
             +   + + K            ++DM  + G L+ AF +   +  +     W +L+  C
Sbjct: 455 EGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLAC 514

Query: 413 AYHGSYEEALKYFSDMRISGICPDH----VVVSSILSAC--------------------- 447
             HG+ E  L   +   +  + P+H    V++S+I +A                      
Sbjct: 515 RIHGNTE--LGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKP 572

Query: 448 AELTVLEFGQQVHA 461
           A  +V+EFG +VH 
Sbjct: 573 AAFSVIEFGTEVHG 586



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 127/268 (47%), Gaps = 35/268 (13%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++  G ++ A  +F++M +R+G +WN+M++ Y  +GR  +A  LFN              
Sbjct: 278 YAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFN-------------- 323

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                            QMQ     P+  T   ++  CS  G    G + H + I +  D
Sbjct: 324 -----------------QMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMD 366

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHV-AWTTMITGYSQNGYGFKAIECFR 224
           ++  +   ++DMY KC  +  A  +F     G+  V +W  +I+GY  +G+G +A+E F 
Sbjct: 367 IDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFS 426

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
            M+VEGVE N  TF SIL+AC+     D G +    +        +   + ++DM  + G
Sbjct: 427 RMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAG 486

Query: 285 DLDSARRLLEY--SEIDNEVSWNSMIVG 310
            L+ A RL++   S   +EV W ++++ 
Sbjct: 487 FLNEAFRLIKKIPSRPSDEV-WGALLLA 513


>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
          Length = 637

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 239/572 (41%), Positives = 369/572 (64%), Gaps = 1/572 (0%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           + S++TACA   + D    +H  +  S F  +V++ ++LI +Y KCG +  ARR+ +   
Sbjct: 67  YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
             +  SW S+I G+A+     EAL L   M     K + FT+ S+L    ++      + 
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           +H+L VK  +    +V +AL+DMYA+ G +D A  VF+ ++ K+ +SW +LI G A  G 
Sbjct: 187 IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGD 246

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
            E  L  F++M+ +G    H   SS+ SA A +  LE G+ VHA  +KSG   S  V N+
Sbjct: 247 GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNT 306

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
           ++ +YAK G + DA +VFD +  +DV+TW +++   AQ G G+EA+  +++M   G   +
Sbjct: 307 ILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLN 366

Query: 538 YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALL 597
            ITF+ +L ACSH GL +  + YF+ M K Y ++P  DHY  ++DLLGR+G L +A   +
Sbjct: 367 QITFLSILTACSHGGLVKEGKQYFDMM-KEYNLEPEIDHYVTVVDLLGRAGLLNDALVFI 425

Query: 598 DQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWE 657
            +M  +P A VW ALL +CR+H + ++G+ AA+++FEL+P +  P V L N+Y++ G+W+
Sbjct: 426 FKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWD 485

Query: 658 DAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAG 717
            AARVRK+MK+ G++KEP CSWVE  + VH+F++ D  HP   +IY K +EI + I++AG
Sbjct: 486 AAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAG 545

Query: 718 YVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMK 777
           YVP+ ++ L +V+E+ ++  L YHSEK+A+AF L+ +P GA IRI KN+R+CGDCH+A +
Sbjct: 546 YVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFR 605

Query: 778 YISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           YIS V+ R I++RD+NRFHHF +G+CSCGDYW
Sbjct: 606 YISKVFKREIVVRDTNRFHHFSSGSCSCGDYW 637



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 197/384 (51%), Gaps = 2/384 (0%)

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           +++  C+    L      H +   + F  + F+   L+ +Y KC  + +A  +F   P  
Sbjct: 69  SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP-A 127

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           ++  +WT++I GY+QN    +A+     M     + N FTF S+L A  A ++   G Q+
Sbjct: 128 RDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQI 187

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           H   +   +  +VYV SAL+DMYA+CG +D A  + +  E  N VSWN++I GFAR+G  
Sbjct: 188 HALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDG 247

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
           +  L +F +M     +   FTY SV +  A    L   K VH+ ++K+G     FV N +
Sbjct: 248 ETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTI 307

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           +DMYAK G++  A  VF+ +  KDV++W S++T  A +G   EA+ +F +MR  G+  + 
Sbjct: 308 LDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQ 367

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR-VFD 496
           +   SIL+AC+   +++ G+Q   +  +      +    ++V +  + G +NDA   +F 
Sbjct: 368 ITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFK 427

Query: 497 SMHTRDVITWTALIMGCAQNGKGK 520
                    W AL+  C  +   K
Sbjct: 428 MPMKPTAAVWGALLGSCRMHKNAK 451



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 177/349 (50%), Gaps = 2/349 (0%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N++I  Y   G + +A+++F+  P ++  +W+SLI GY+   +  EA  L   M   
Sbjct: 100 FLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRG 159

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
            ++P+ +T  ++L+          GEQ H   +K  +  + +V + L+DMYA+C  +  A
Sbjct: 160 RFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMA 219

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F    + KN V+W  +I G+++ G G   +  F +M+  G E+  FT+ S+ +A A 
Sbjct: 220 IAVFDQL-ESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAG 278

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           + A + G  VH  ++ SG   + +V + ++DMYAK G +  AR++ +  +  + V+WNSM
Sbjct: 279 IGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSM 338

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           +  FA+ G  +EA++ F++M    + ++  T+ S+L   +    +   K    ++ +   
Sbjct: 339 LTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNL 398

Query: 368 EGYKFVNNALIDMYAKQGNL-DCAFMVFNLMQDKDVISWTSLITGCAYH 415
           E        ++D+  + G L D    +F +        W +L+  C  H
Sbjct: 399 EPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMH 447



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 175/354 (49%), Gaps = 17/354 (4%)

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD 388
           AR++      Y S++   A    L++A+++H+ +  + F G  F++N+LI +Y K G + 
Sbjct: 57  ARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVA 116

Query: 389 CAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
            A  VF+ M  +D+ SWTSLI G A +   +EAL     M      P+    +S+L A  
Sbjct: 117 DARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAG 176

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
                  G+Q+HA+ +K      + V ++L+ +YA+CG ++ A  VFD + +++ ++W A
Sbjct: 177 ASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNA 236

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
           LI G A+ G G+  L  + +M   G +  + T+  +  A +  G  E  +W    M    
Sbjct: 237 LIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHM---- 292

Query: 569 GIKPGPDHYA----CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLEL 624
            IK G    A     ++D+  +SG +I+A+ + D+ V + D   W ++L+A   +G   L
Sbjct: 293 -IKSGERLSAFVGNTILDMYAKSGSMIDARKVFDR-VDKKDVVTWNSMLTAFAQYG---L 347

Query: 625 GERAANNLFELEP----MNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
           G  A  +  E+      +N + ++ +    S  G  ++  +   +MK   +  E
Sbjct: 348 GREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPE 401



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 148/305 (48%), Gaps = 5/305 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +  + ++  YA  GR+  A  +F++   KN  +W++LI G++  G       +F +MQ
Sbjct: 199 DVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQ 258

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G+  + +T  +V    +  G L++G+  H + IK+   L+AFV   ++DMYAK   + 
Sbjct: 259 RNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMI 318

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A  +F    D K+ V W +M+T ++Q G G +A+  F +MR  GV  NQ TF SILTAC
Sbjct: 319 DARKVFDRV-DKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTAC 377

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           +       G Q    +     E  +     ++D+  + G L+ A   +    +    +  
Sbjct: 378 SHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVW 437

Query: 306 SMIVGFARQGFHKEA-LSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIV 363
             ++G  R   HK A +  F   H  ++  DD   P +L N +AS    + A  V  ++ 
Sbjct: 438 GALLGSCR--MHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMK 495

Query: 364 KTGFE 368
            TG +
Sbjct: 496 ATGVK 500



 Score = 47.8 bits (112), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 13/201 (6%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP----F 95
           N  L  ++ SG + +A ++F+++  +D  TWN+M+ A+A  G  REA   F E       
Sbjct: 305 NTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVH 364

Query: 96  KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
            N  T+ S++   S+ GL  E  + F  M+     P       V+ L    GLL     F
Sbjct: 365 LNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVF 424

Query: 156 HGYAIKTCFDLNAFV---VTGLVDMYAKCKC-IFEAEYLFKMFPDGKNHVAWTTMITGYS 211
                K      A V   + G   M+   K   F A+++F++ PD          I  Y+
Sbjct: 425 ---IFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNI--YA 479

Query: 212 QNGYGFKAIECFRDMRVEGVE 232
             G    A    + M+  GV+
Sbjct: 480 STGQWDAAARVRKMMKATGVK 500


>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 741

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 269/697 (38%), Positives = 402/697 (57%), Gaps = 37/697 (5%)

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP--DGKNHVAWTTM 206
           LQ     H   IKT      + ++ L+++           Y   +F      N + W TM
Sbjct: 46  LQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTM 105

Query: 207 ITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF 266
             G++ +     A++ +  M   G+  N +TFP +L +CA   A   G Q+HG +L  G+
Sbjct: 106 FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGY 165

Query: 267 EANVYVQSALIDMYAKCGDLDSARRLLEYSE----------------------------- 297
           + +++V ++LI +Y + G L+ AR++ + S                              
Sbjct: 166 DLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDE 225

Query: 298 --IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
             + + VSWN+MI G+A  G +KEAL LFK+M   +I+ D+ T  +V++  A +  +   
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELG 285

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           + VHS I   GF     + N+L+D+Y+K G L+ A  +F  +  KDVISW +LI G  + 
Sbjct: 286 RQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHM 345

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVF---LKSGGCSSL 472
             Y+EAL  F +M  SG  P+ V + SIL ACA L  ++ G+ +H      LKS   +S 
Sbjct: 346 NLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNAS- 404

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
           S+  SL+ +YAKCG I  A++VF+S+  + + +W A+I G A +G+   A   + +M   
Sbjct: 405 SLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKI 464

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIE 592
           G +PD ITFVGLL ACS +G+ +  R  F +M + Y I P  +HY CMIDLLG SG   E
Sbjct: 465 GIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKE 524

Query: 593 AKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYST 652
           A+ +++ M  EPD  +W +LL AC++ G++ELGE  A NL ++EP N   YV LSN+Y+T
Sbjct: 525 AEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYAT 584

Query: 653 AGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLL 712
           AG+W + A++R L+  +G++K PGCS +E +S VH FI  D+ HP   +IY  ++E+ +L
Sbjct: 585 AGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVL 644

Query: 713 IKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDC 772
           +++AG+VPD +  L  +EEE KE  L +HSEKLA+AFGL++   G  + I KNLRVC +C
Sbjct: 645 LEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNC 704

Query: 773 HTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           H A K IS +Y R II RD  RFHHF+ G CSC DYW
Sbjct: 705 HEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 130/470 (27%), Positives = 229/470 (48%), Gaps = 36/470 (7%)

Query: 83  LREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRL 142
           L  A  +F      N   W+++  G++     + A +L+  M   G  P+ YT   +L+ 
Sbjct: 84  LPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKS 143

Query: 143 CSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK------CKCIFE---------- 186
           C+     + G+Q HG+ +K  +DL+ FV T L+ +Y +       + +F+          
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSY 203

Query: 187 ---------------AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV 231
                          A+ LF   P  K+ V+W  MI+GY++ G   +A+E F++M    +
Sbjct: 204 TALIKGYASRGYIESAQKLFDEIP-VKDVVSWNAMISGYAETGNYKEALELFKEMMKTNI 262

Query: 232 ESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR 291
             ++ T  ++++ACA   + + G QVH  I   GF +N+ + ++L+D+Y+KCG+L++A  
Sbjct: 263 RPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACG 322

Query: 292 LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID 351
           L E     + +SWN++I G+     +KEAL LF++M     + +D T  S+L   A    
Sbjct: 323 LFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGA 382

Query: 352 LNNAKSVHSLIVK--TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
           ++  + +H  I K          +  +LIDMYAK G+++ A  VFN +  K + SW ++I
Sbjct: 383 IDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 442

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
            G A HG  + A   FS MR  GI PD +    +LSAC+   +L+ G+ +     +    
Sbjct: 443 FGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKI 502

Query: 470 SS-LSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNG 517
           +  L     ++ +    G   +A  + ++M    D + W +L+  C   G
Sbjct: 503 TPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRG 552



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 226/447 (50%), Gaps = 25/447 (5%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +  +G +++A ++F++   RD  ++  +I  YA+ G +  A+KLF+E P K+  +W+++I
Sbjct: 179 YVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMI 238

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            GY+  G   EA ELF +M     RP + T+  V+  C+  G ++ G Q H +     F 
Sbjct: 239 SGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFG 298

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            N  +V  L+D+Y+KC  +  A  LF+     K+ ++W T+I GY+      +A+  F++
Sbjct: 299 SNLKIVNSLMDLYSKCGELETACGLFEGLL-YKDVISWNTLIGGYTHMNLYKEALLLFQE 357

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI---LSSGFEANVYVQSALIDMYAK 282
           M   G   N  T  SIL ACA + A D G  +H  I   L S   A+  ++++LIDMYAK
Sbjct: 358 MLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASS-LRTSLIDMYAK 416

Query: 283 CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
           CGD+++A ++       +  SWN+MI GFA  G    A  +F +M    I+ DD T+  +
Sbjct: 417 CGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGL 476

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN-----ALIDMYAKQGNL-DCAFMVFNL 396
           L+  + +  L+  +     I +T  + YK          +ID+    G   +   M+ N+
Sbjct: 477 LSACSRSGMLDLGRH----IFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNM 532

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDM-RISGICPD-HVVVSSILSACAELTVLE 454
             + D + W SL+  C   G+ E    +  ++ +I    P  +V++S+I +       + 
Sbjct: 533 EMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEV- 591

Query: 455 FGQQVHAVFLKSG-----GCSSLSVDN 476
              ++ A+    G     GCSS+ +D+
Sbjct: 592 --AKIRALLNDKGMKKVPGCSSIEIDS 616


>gi|302798306|ref|XP_002980913.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
 gi|300151452|gb|EFJ18098.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
          Length = 809

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 279/775 (36%), Positives = 430/775 (55%), Gaps = 20/775 (2%)

Query: 51  EIDEAGQLFEKMSDRDG-FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS 109
           +I E+G L +   +    F  N ++  Y   GR  EA++ F+    KN F+W+S++  Y 
Sbjct: 39  QIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIAHKNIFSWTSILVAYF 98

Query: 110 NYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAF 169
           + GL  +A E F QM   G  P +      L +C +   L+ G   H        D +  
Sbjct: 99  HAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLEDGAGIHRQIQDKLLDSDLE 158

Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
           +   LV MY KC  +  A+ LF    + KN ++WT +++ +++NG   +     R M VE
Sbjct: 159 IGNALVSMYGKCGRLDLAKQLFDCL-EMKNVISWTILVSVFAENGRRRETWGLLRSMAVE 217

Query: 230 GVESNQFTFPSILTACAAVSARDFGA-QVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
           G++ ++    ++L  C++    D  +   H  I+ SG +    V +AL+ M+A+CG +D 
Sbjct: 218 GIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGSGLDREAVVATALLSMFARCGRVDK 277

Query: 289 ARRLLE-YSEIDNEV--SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           AR + E  ++   +V   WN+MI  +A +G  KEAL L   +  + +K +  T+ S L  
Sbjct: 278 AREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSLQLQGVKPNCITFISSLGA 337

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
            +S   L + +++H LI ++GF+    V NAL+ MY + G+L  +  +F+ M +KD+ SW
Sbjct: 338 CSS---LQDGRALHLLIDESGFDREVSVANALVTMYGRCGSLLDSAKLFSEMAEKDLASW 394

Query: 406 TSLITGCAYHGSYEEALKYFSDMR-ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
            S I   AYHG  +E +K    MR   G+ P  V + + +SAC  L      ++VH    
Sbjct: 395 NSAIAAHAYHGRSDECIKLLDQMRGEGGLEPSSVTLVTAMSACGGLADPSSSKRVHERAR 454

Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ 524
           + G  S   V N LV +Y K G ++ A  +FD    R+V TW A+     Q G  +  L 
Sbjct: 455 ELGLESETCVANGLVDMYGKAGDVDTARYIFDRALRRNVTTWNAMAGAYRQCGVTRGVLW 514

Query: 525 FYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLL 584
               M   G +PD +TFV LL  C H+GL E AR+ F +M + +GI P P HY+C+IDLL
Sbjct: 515 LVRTMQRDGYRPDSVTFVSLLSVCGHSGLLEEARYNFVAMRREFGIDPSPKHYSCVIDLL 574

Query: 585 GRSGKLIEAKALLDQM-VGEPDAT-VWKALLSACRVHGDLELGERA----ANNLFELEPM 638
            R+G+L +A+  + ++ V  P ++ +W ALL ACR  GD     R     A ++ ++EP 
Sbjct: 575 ARAGELQQAEDFIARISVSSPASSPMWMALLGACRSLGDSSSRARRAARNAMDVEKMEPR 634

Query: 639 N----AMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDR 694
           +    +  +V L+N+ + +G W++A  +RK M  +G+RKEPG S +   +++H F++ DR
Sbjct: 635 SQHDPSAAHVALANICAASGNWDEALSIRKAMAEKGLRKEPGRSLIAVKNRLHEFVAGDR 694

Query: 695 GHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTL 754
            HP R +IY+++  +   + + GYV D     HNV E  K   L  HSEKLAVAFG+L+ 
Sbjct: 695 DHPRREEIYAELRRLERAMVDRGYVVDTGMVTHNVGEADKRDLLGCHSEKLAVAFGVLST 754

Query: 755 PQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           P G+ +RI KNLR CGDCHTA+K ISA+  R I++RDSNRFHHF+ G+CSCGDYW
Sbjct: 755 PPGSSLRIIKNLRACGDCHTAIKLISAIEGREIVVRDSNRFHHFRNGSCSCGDYW 809



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 194/423 (45%), Gaps = 41/423 (9%)

Query: 38  DLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK 96
           ++  ALV  +   G +D A QLF+ +  ++  +W  +++ +A +GR RE           
Sbjct: 158 EIGNALVSMYGKCGRLDLAKQLFDCLEMKNVISWTILVSVFAENGRRRE----------- 206

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF- 155
              TW                  L   M +EG +P +  L  +L +CS +G+L       
Sbjct: 207 ---TWG-----------------LLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMA 246

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHV--AWTTMITGYSQN 213
           H Y + +  D  A V T L+ M+A+C  + +A  +F+   D    V   W  MIT Y+  
Sbjct: 247 HDYIVGSGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHR 306

Query: 214 GYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
           G   +A+     ++++GV+ N  TF S L AC+++     G  +H  I  SGF+  V V 
Sbjct: 307 GCSKEALFLLDSLQLQGVKPNCITFISSLGACSSLQD---GRALHLLIDESGFDREVSVA 363

Query: 274 SALIDMYAKCGD-LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR-D 331
           +AL+ MY +CG  LDSA+   E +E D   SWNS I   A  G   E + L  +M     
Sbjct: 364 NALVTMYGRCGSLLDSAKLFSEMAEKD-LASWNSAIAAHAYHGRSDECIKLLDQMRGEGG 422

Query: 332 IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
           ++    T  + ++      D +++K VH    + G E    V N L+DMY K G++D A 
Sbjct: 423 LEPSSVTLVTAMSACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDTAR 482

Query: 392 MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELT 451
            +F+    ++V +W ++       G     L     M+  G  PD V   S+LS C    
Sbjct: 483 YIFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGHSG 542

Query: 452 VLE 454
           +LE
Sbjct: 543 LLE 545



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 83/166 (50%), Gaps = 10/166 (6%)

Query: 441 SSILSACAELTVLEFGQQVHAVFLKSG-------GCSSLSVDNSLVLVYAKCGCINDANR 493
           + +L  C  L  L  G+++HA   +SG          +  + N LV +Y KCG  ++A R
Sbjct: 18  ARLLKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQR 77

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS-HAG 552
            FDS+  +++ +WT++++     G   +AL+ + QM+  G +PD + F+  L  C     
Sbjct: 78  AFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKR 137

Query: 553 LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLD 598
           L + A  + +  DK+  +    +    ++ + G+ G+L  AK L D
Sbjct: 138 LEDGAGIHRQIQDKL--LDSDLEIGNALVSMYGKCGRLDLAKQLFD 181


>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 290/774 (37%), Positives = 426/774 (55%), Gaps = 79/774 (10%)

Query: 63  SDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFW 122
           +D D   WN  I  +  +G+   A +LFN  P ++  +W+++I G  +      A +LF 
Sbjct: 45  TDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFE 104

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           +M      P++                               DL ++ V  ++    + +
Sbjct: 105 KM------PTR-------------------------------DLVSWNV--MISGCVRYR 125

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            +  A  LF   P+ ++ V+W  M++GY+QNGY  +A E F +M  +    N  ++  +L
Sbjct: 126 NLRAARLLFDQMPE-RDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK----NSISWNGML 180

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
            A    + R   A+    +  S  +  +   + ++  Y K   L  AR + +     +EV
Sbjct: 181 AAYVQ-NGRIEDARR---LFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEV 236

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV---- 358
           SWN+MI G+A+ G   EA  LF++   RD+    FT+ ++++ +  N  L+ A+ V    
Sbjct: 237 SWNTMISGYAQNGELLEAQRLFEESPVRDV----FTWTAMVSGYVQNGMLDEARRVFDGM 292

Query: 359 --------HSLIV-----------KTGFEGYKFVN----NALIDMYAKQGNLDCAFMVFN 395
                   +++I            +  FE     N    N +I  YA+ G++  A   F+
Sbjct: 293 PEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFD 352

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
            M  +D ISW ++I G A  G  EEAL  F +M+  G   +    +S LS CAE+  LE 
Sbjct: 353 RMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALEL 412

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
           G+QVH   +K+G  S   V N+L+++Y KCG I+DA  VF+ +  ++V++W  +I G A+
Sbjct: 413 GKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYAR 472

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
           +G GKEAL  ++ M   G  PD +T VG+L ACSH GL +    YF SM + YGI     
Sbjct: 473 HGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSK 532

Query: 576 HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
           HY CMIDLLGR+G+L +A+ L+  M  EPDA  W ALL A R+HG+ ELGE+AA  +FE+
Sbjct: 533 HYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEM 592

Query: 636 EPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG 695
           EP N+  YV LSN+Y+ +G+W D  R+R  M+ RG++K PG SWVE  +++H F   D  
Sbjct: 593 EPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSV 652

Query: 696 HPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLP 755
           HP R  IY+ ++E+ L +K+ GYV      LH+VEEE K   L YHSEKLAVAFG+L +P
Sbjct: 653 HPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIP 712

Query: 756 QGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            G PIR+ KNLRVC DCH AMK+IS +  R IILRDS+RFHHF  G CSCGDYW
Sbjct: 713 AGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 766



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 233/469 (49%), Gaps = 47/469 (10%)

Query: 58  LFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEA 117
           LF++M +RD  +WN M++ YA +G ++EAK++F+E P KN  +W+ ++  Y   G   +A
Sbjct: 133 LFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDA 192

Query: 118 FELF----------WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLN 167
             LF          W   + GY           RL   +G+  R  +    +  T     
Sbjct: 193 RRLFESKADWELISWNCMMGGYVKRN-------RLVDARGIFDRMPERDEVSWNT----- 240

Query: 168 AFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR 227
                 ++  YA+   + EA+ LF+  P  ++   WT M++GY QNG   +A   F  M 
Sbjct: 241 ------MISGYAQNGELLEAQRLFEESPV-RDVFTWTAMVSGYVQNGMLDEARRVFDGM- 292

Query: 228 VEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEA----NVYVQSALIDMYAKC 283
               E N  ++ +I+         D   ++        FEA    NV   + +I  YA+ 
Sbjct: 293 ---PEKNSVSWNAIIAGYVQCKRMDQAREL--------FEAMPCQNVSSWNTMITGYAQN 341

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
           GD+  AR   +     + +SW ++I G+A+ G+ +EAL LF +M     +++  T+ S L
Sbjct: 342 GDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTL 401

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVI 403
           +  A    L   K VH  +VK G E   +V NAL+ MY K GN+D A++VF  +++K+V+
Sbjct: 402 STCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVV 461

Query: 404 SWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVF 463
           SW ++I G A HG  +EAL  F  M+ +GI PD V +  +LSAC+   +++ G +     
Sbjct: 462 SWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSM 521

Query: 464 LKSGGCSSLSVDNS-LVLVYAKCGCINDANRVFDSMH-TRDVITWTALI 510
            +  G ++ S   + ++ +  + G ++DA  +  +M    D  TW AL+
Sbjct: 522 TQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALL 570



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 125/378 (33%), Positives = 197/378 (52%), Gaps = 31/378 (8%)

Query: 54  EAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGL 113
           +A  +F++M +RD  +WNTMI+ YA +G L EA++LF E+P ++ FTW++++ GY   G+
Sbjct: 222 DARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGM 281

Query: 114 DIEAFELF----------WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC 163
             EA  +F          W   + GY                K + Q  E F     +  
Sbjct: 282 LDEARRVFDGMPEKNSVSWNAIIAGY-------------VQCKRMDQARELFEAMPCQNV 328

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
              N  ++TG    YA+   I +A   F   P  ++ ++W  +I GY+Q+GYG +A+  F
Sbjct: 329 SSWNT-MITG----YAQNGDIAQARNFFDRMPQ-RDSISWAAIIAGYAQSGYGEEALHLF 382

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
            +M+ +G   N+ TF S L+ CA ++A + G QVHG ++ +G E+  YV +AL+ MY KC
Sbjct: 383 VEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKC 442

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
           G++D A  + E  E    VSWN+MI G+AR GF KEAL LF+ M    I  DD T   VL
Sbjct: 443 GNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVL 502

Query: 344 N-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKD 401
           + C  + +     +  +S+    G          +ID+  + G LD A  ++ N+  + D
Sbjct: 503 SACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPD 562

Query: 402 VISWTSLITGCAYHGSYE 419
             +W +L+     HG+ E
Sbjct: 563 AATWGALLGASRIHGNTE 580



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 148/285 (51%), Gaps = 2/285 (0%)

Query: 30  GNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKL 89
           G   K +   N  +  +     +D+A +LFE M  ++  +WNTMI  YA +G + +A+  
Sbjct: 291 GMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNF 350

Query: 90  FNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLL 149
           F+  P ++  +W+++I GY+  G   EA  LF +M+ +G R ++ T  + L  C+    L
Sbjct: 351 FDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAAL 410

Query: 150 QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
           + G+Q HG  +K   +   +V   L+ MY KC  I +A  +F+   + K  V+W TMI G
Sbjct: 411 ELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEE-KEVVSWNTMIAG 469

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ-VHGCILSSGFEA 268
           Y+++G+G +A+  F  M+  G+  +  T   +L+AC+     D G +  +      G  A
Sbjct: 470 YARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITA 529

Query: 269 NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           N    + +ID+  + G LD A+ L++    + + +    ++G +R
Sbjct: 530 NSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASR 574



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 83/340 (24%), Positives = 142/340 (41%), Gaps = 61/340 (17%)

Query: 324 FKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK 383
           F+++H+R   +      +  N   S    N  K+  SL        +    N  I  + +
Sbjct: 9   FRQLHSRSC-LRSLQTTTTANRKPST--RNQPKTTSSLATDADIVKW----NIAITNHMR 61

Query: 384 QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSI 443
            G  D A  +FN M  +  ISW ++I+GC  +  +  A + F  M    +   +V++S  
Sbjct: 62  NGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKMPTRDLVSWNVMIS-- 119

Query: 444 LSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDV 503
                                   GC              +   +  A  +FD M  RDV
Sbjct: 120 ------------------------GC-------------VRYRNLRAARLLFDQMPERDV 142

Query: 504 ITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFES 563
           ++W A++ G AQNG  KEA + +D+M  + +    I++ G+L A    G  E+AR  FES
Sbjct: 143 VSWNAMLSGYAQNGYVKEAKEIFDEMPCKNS----ISWNGMLAAYVQNGRIEDARRLFES 198

Query: 564 MDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
                 I      + CM+    +  +L++A+ + D+M  E D   W  ++S    +G+L 
Sbjct: 199 KADWELIS-----WNCMMGGYVKRNRLVDARGIFDRMP-ERDEVSWNTMISGYAQNGELL 252

Query: 624 LGERAANNLFELEPM-NAMPYVQLSNMYSTAGKWEDAARV 662
             +R    LFE  P+ +   +  + + Y   G  ++A RV
Sbjct: 253 EAQR----LFEESPVRDVFTWTAMVSGYVQNGMLDEARRV 288


>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
 gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
          Length = 805

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 276/754 (36%), Positives = 404/754 (53%), Gaps = 17/754 (2%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           RDG+  ++++  Y   G L  A  +F++   K+   W+ LI  Y + G    A  LF ++
Sbjct: 60  RDGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRI 119

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
             EG         +VL  CS +  L  G   H  A++    L   V + LV MY +C  +
Sbjct: 120 LQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSL 179

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            +A  LF       + V W  MIT  SQNG   +A+E F  M   G+  +  TF S+  A
Sbjct: 180 RDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKA 239

Query: 245 CAAVSARDFGAQV---HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           C++ S     +QV   H C+  +G  ++V V +AL++ YA+CG++D AR+        N 
Sbjct: 240 CSS-SPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNA 298

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS---NIDLNNAKSV 358
           VSW SMI  F + G H  A+  F  M      + +   P+    FA+     DL  A+ V
Sbjct: 299 VSWTSMIAAFTQIG-HLLAVETFHAM------LLEGVVPTRSTLFAALEGCEDLRVARLV 351

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK--DVISWTSLITGCAYHG 416
            ++  + G      +   L+  YA+    + A  VF+  ++   D    T++I   A   
Sbjct: 352 EAIAQEIGVVTDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCR 411

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVD 475
                 K +      GI PD ++  + L ACA L  L  G+Q+HA           +++ 
Sbjct: 412 DRRSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLG 471

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           N++V +Y +CG + DA   FD M  RD I+W A++   AQ+G+ ++    +  ML  G  
Sbjct: 472 NAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFD 531

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
            + I F+ LL AC+HAGL +    +F +M   +G+ P  +HY CM+DLLGR G+L +A  
Sbjct: 532 AERIAFLNLLSACAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHG 591

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
           ++  M   PDA  W AL+ ACR++GD E G  AA  + EL   +   YV L N+YS AG+
Sbjct: 592 IVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRADHTAAYVALCNIYSAAGR 651

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
           W+DAA VRK+M   G+RK PG S +E  S+VH F+  DR HP    IY++++ +M  I+ 
Sbjct: 652 WDDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIER 711

Query: 716 AGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
           AGY       LH+VEEE KE  L +HSEKLA+AFG+++ PQG+ +R+ KNLRVC DCH A
Sbjct: 712 AGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKNLRVCVDCHNA 771

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            K+IS V+ R I++RD  RFHHFK G CSCGDYW
Sbjct: 772 SKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 51/97 (52%), Gaps = 1/97 (1%)

Query: 60  EKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFE 119
           ++  DRD    N +++ Y   G LR+A+  F+  P ++  +W++++   + +G   +  +
Sbjct: 461 DRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCD 520

Query: 120 LFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG-EQF 155
           LF  M  EG+   +    N+L  C+  GL++ G E F
Sbjct: 521 LFRAMLQEGFDAERIAFLNLLSACAHAGLVKAGCEHF 557


>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 820

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 270/749 (36%), Positives = 419/749 (55%), Gaps = 22/749 (2%)

Query: 3   KLDFKILNFSLRC--------RSKIIGPARYTHNVGNS----VKPASDLNRALVDFSNSG 50
           K+D+ +L  SL          +SKI+       ++G S         DL   L D +  G
Sbjct: 73  KIDWVVLTGSLAVSVPSQTAKKSKIVVGRNRPESIGISETYQQTQVQDLIDVLRDCAEKG 132

Query: 51  EIDEAGQ-----LFEKMSDRDGFT-WNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSL 104
            I EA       L     D+D    +N     Y+     R A  +F+E P +N F+W+ +
Sbjct: 133 SIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTVM 192

Query: 105 IYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCF 164
           I G + +GL  + F+ F +M   G  P ++    +++ C     L+ G+  H   +   F
Sbjct: 193 IVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGF 252

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
             + FV T L++MYAK   I ++ ++F M  +  N V+W  MI+G + NG   +A + F 
Sbjct: 253 ATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTE-HNQVSWNAMISGCTSNGLHLEAFDLFV 311

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
            M+      N +T  S+  A   +   + G +V  C    G E NV V +ALIDMY+KCG
Sbjct: 312 RMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCG 371

Query: 285 DLDSARRLLEYSEIDNEVS--WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
            L  AR + + + I+  V+  WN+MI G+++ G  +EAL L+ +M    I  D +TY SV
Sbjct: 372 SLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSV 431

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKF-VNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
            N  A++  L   + VH +++K G +     VNNA+ D Y+K G L+    VF+ M+++D
Sbjct: 432 FNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERD 491

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
           ++SWT+L+T  +     EEAL  F  MR  G  P+    SS+L +CA L  LE+G+QVH 
Sbjct: 492 IVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHG 551

Query: 462 VFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKE 521
           +  K+G  +   ++++L+ +YAKCG I +A +VFD +   D+++WTA+I G AQ+G  ++
Sbjct: 552 LLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVED 611

Query: 522 ALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMI 581
           ALQ + +M   G K + +T + +LFACSH G+ E   +YF+ M+  YG+ P  +HYAC+I
Sbjct: 612 ALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACII 671

Query: 582 DLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAM 641
           DLLGR G+L +A   + +M  EP+  VW+ LL  CRVHG++ELGE AA  +  + P  + 
Sbjct: 672 DLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSA 731

Query: 642 PYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTD 701
            YV LSN Y   G +ED   +R +MK +G++KEPG SW+    +VH F S D+ HP + +
Sbjct: 732 TYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKE 791

Query: 702 IYSKIDEIMLLIKEAGYVPDMNFALHNVE 730
           IY K++E+   IK  GYVPD+ + L+N +
Sbjct: 792 IYVKLEELREKIKAMGYVPDLRYVLNNAD 820


>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 276/748 (36%), Positives = 415/748 (55%), Gaps = 5/748 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM- 124
           D F  N MIA Y   G L EA +LF++ P +N  +W+SLI G+S  G  +EA+  F  + 
Sbjct: 244 DLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLL 303

Query: 125 -QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
              +G  P   T+  +L +CS +G +  G   HG A+K        V   L+DMY+KC C
Sbjct: 304 ESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGC 363

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG--VESNQFTFPSI 241
           + EA  LF+   + K+ V+W +MI  YS+ G+ F+  +  R M +E   +E N+ T  ++
Sbjct: 364 LSEAAILFRKI-ENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNL 422

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           L AC   S       +HG  L   F+    + +A I  YAKCG L  A  +       + 
Sbjct: 423 LPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSV 482

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
            SWN++I G A+ G   +AL  + +M    I  DDF+  S+L        L   K +H  
Sbjct: 483 SSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGF 542

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           +++ G E   FV  +L+ +Y            F  M DK+ + W ++++G + +    EA
Sbjct: 543 VLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEA 602

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           L  F  M   G+ PD + ++SIL AC++L+ L  G++VH   LK+       V  SL+ +
Sbjct: 603 LSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDM 662

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           YAK G +  + R+F+ ++ ++V +W  +I G   +G+G +A++ ++ M     +PD  TF
Sbjct: 663 YAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTF 722

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
           +G+L AC HAGL      Y   M  +Y ++P  +HYAC+ID+LGR+G+L EA   +++M 
Sbjct: 723 LGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMP 782

Query: 602 GEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
            EPDA +W +LLS+   + DLE+GE+ A  L  LE   A  Y+ LSN+Y+TAGKW+    
Sbjct: 783 EEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRM 842

Query: 662 VRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPD 721
           VR+ MK   ++K+ GCSW+E   +V+ FI+ +  +P   +I    + +   I E GY PD
Sbjct: 843 VRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPD 902

Query: 722 MNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISA 781
            +  LH +EE  K   L  HSEK+A+ FG L   +G  +RI KNLR+C DCH A KYIS 
Sbjct: 903 CSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISK 962

Query: 782 VYLRHIILRDSNRFHHFKAGNCSCGDYW 809
              R I++RD+ RFHHFK G CSCGDYW
Sbjct: 963 AAKREIVIRDNKRFHHFKKGICSCGDYW 990



 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 175/580 (30%), Positives = 302/580 (52%), Gaps = 27/580 (4%)

Query: 68  FTWNT-MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM-Q 125
           F  NT +I  Y+  G   E++ +F+    KN F W++L+ GY    L  EA   F ++  
Sbjct: 143 FVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELIS 202

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           +  ++P  +T   +++ C+ K  +  G+  HG A+K    ++ FV   ++ +Y KC  + 
Sbjct: 203 VTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLD 262

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM--RVEGVESNQFTFPSILT 243
           EA  LF   P+ +N ++W ++I G+S+NG+  +A   FR +    +G+  +  T  ++L 
Sbjct: 263 EAVELFDKMPE-QNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLP 321

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
            C+     D G  +HG  +  G    + V +ALIDMY+KCG L  A  L    E  + VS
Sbjct: 322 VCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVS 381

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARD--IKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           WNSMI  ++R+GF  E   L +KM   +  +++++ T  ++L       +L + +++H  
Sbjct: 382 WNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGY 441

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
            ++  F+  + +NNA I  YAK G+L  A  VF  M  K V SW ++I G A +G   +A
Sbjct: 442 SLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKA 501

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           L ++ +M   GI PD   + S+L AC  L +L++G+++H   L++G   +  V  SL+ +
Sbjct: 502 LDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSL 561

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           Y  C         F++M  ++ + W A++ G +QN    EAL  + QML+ G +PD I  
Sbjct: 562 YFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAI 621

Query: 542 VGLLFACSH---AGLAENARWYFESMDKVYGIKPG--PDHY-AC-MIDLLGRSGKLIEAK 594
             +L ACS     GL +            + +K     D++ AC ++D+  +SG L  ++
Sbjct: 622 ASILGACSQLSALGLGKEVH--------CFALKNSLMEDNFVACSLMDMYAKSGFLGHSQ 673

Query: 595 ALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFE 634
            + +++ G+  A+ W  +++   VHG    G +A   LFE
Sbjct: 674 RIFNRLNGKEVAS-WNVMITGFGVHGQ---GNKAV-ELFE 708



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 194/409 (47%), Gaps = 35/409 (8%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           AL+D +S  G + EA  LF K+ ++   +WN+MI A                        
Sbjct: 353 ALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGA------------------------ 388

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEG--YRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
                  YS  G   E F+L  +M +E      ++ T+ N+L  C  +  L      HGY
Sbjct: 389 -------YSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGY 441

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFK 218
           +++  F     +    +  YAKC  +  AE++F    + K+  +W  +I G++QNG   K
Sbjct: 442 SLRHSFQYKELINNAFIAAYAKCGSLVFAEHVF-FGMNTKSVSSWNAVIGGHAQNGDPIK 500

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID 278
           A++ + +M   G+  + F+  S+L AC  +    +G ++HG +L +G E N +V  +L+ 
Sbjct: 501 ALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLS 560

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
           +Y  C      R   E     N V WN+M+ G+++     EALSLF++M +  ++ D+  
Sbjct: 561 LYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIA 620

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
             S+L   +    L   K VH   +K       FV  +L+DMYAK G L  +  +FN + 
Sbjct: 621 IASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLN 680

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSAC 447
            K+V SW  +ITG   HG   +A++ F DM+ S   PD      +L AC
Sbjct: 681 GKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQAC 729



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 163/314 (51%), Gaps = 6/314 (1%)

Query: 241 ILTACAAVSARDFGAQVHGCI-LSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
           +L  C      + G ++   + +SS F  +  + + LI MY+ CG    +R + +     
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKM-HARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
           N   WN+++ G+ R   + EA+  F ++    + + D+FT+P ++       D++  KSV
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           H + VK G     FV NA+I +Y K G LD A  +F+ M ++++ISW SLI G + +G +
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFW 292

Query: 419 EEALKYFSDMRIS--GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
            EA + F  +  S  G+ PD   + ++L  C+    ++ G  +H + +K G    L V N
Sbjct: 293 LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCN 352

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG--T 534
           +L+ +Y+KCGC+++A  +F  +  + V++W ++I   ++ G   E      +M       
Sbjct: 353 ALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELM 412

Query: 535 KPDYITFVGLLFAC 548
           + + +T + LL AC
Sbjct: 413 EVNEVTILNLLPAC 426



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 13/234 (5%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPF-----KNFFTWSSLIYGYSNYGLDIEAFE 119
           R+G   N+ +A    S     +K  +  T F     KN   W++++ GYS   L  EA  
Sbjct: 545 RNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALS 604

Query: 120 LFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYA 179
           LF QM  +G  P +  + ++L  CS    L  G++ H +A+K     + FV   L+DMYA
Sbjct: 605 LFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYA 664

Query: 180 KCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFP 239
           K   +  ++ +F    +GK   +W  MITG+  +G G KA+E F DM+    + ++FTF 
Sbjct: 665 KSGFLGHSQRIFNRL-NGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFL 723

Query: 240 SILTACA----AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
            +L AC          ++ AQ+         E  +   + +IDM  + G L+ A
Sbjct: 724 GVLQACCHAGLVSEGLNYLAQMQTLY---KLEPELEHYACVIDMLGRAGRLNEA 774



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 128/258 (49%), Gaps = 5/258 (1%)

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
           L V + F G   +N  LI MY+  G    + +VF+ + +K++  W +L++G   +  Y+E
Sbjct: 133 LCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDE 192

Query: 421 ALKYFSDM-RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
           A+  F ++  ++   PD+     ++ AC     +  G+ VH + +K G    L V N+++
Sbjct: 193 AIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMI 252

Query: 480 LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK--PD 537
            +Y KCG +++A  +FD M  +++I+W +LI G ++NG   EA + +  +L  G    PD
Sbjct: 253 ALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPD 312

Query: 538 YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALL 597
             T V LL  CS  G  +        M    G+         +ID+  + G L EA A+L
Sbjct: 313 VATMVTLLPVCSGEGNVD-VGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEA-AIL 370

Query: 598 DQMVGEPDATVWKALLSA 615
            + +       W +++ A
Sbjct: 371 FRKIENKSVVSWNSMIGA 388


>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
 gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
          Length = 920

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 278/763 (36%), Positives = 421/763 (55%), Gaps = 26/763 (3%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS-NYGLDIEAFELFW 122
           +RD F    ++ AY   G +  A ++F+     +   W++ I   + N      A  L  
Sbjct: 167 ERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVR 226

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           +M LEG  P++ +   +L  C     L      H    +  F  +  V T LV MY +C 
Sbjct: 227 RMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCG 286

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            + E+  +F+     +NHV+W  MI  ++Q G+   A   +  M+ EG   N+ TF + L
Sbjct: 287 SVDESIAVFEAMA-VRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTAL 345

Query: 243 TACAAVSARDFG--AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
            A  + S++D G  A +HG I  +G E +V V +AL+ MY   G +D AR   +     N
Sbjct: 346 KAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKN 405

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
            VSWN+M+  +   G  +EA+ LF  M  + +  +  +Y +VL C     D++ A+S+H+
Sbjct: 406 IVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCE---DVSEARSIHA 462

Query: 361 LIVKTG-FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
            +V  G F     + N ++ M+A+ G+L+ A   F+    KD +SW + +   +      
Sbjct: 463 EVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLH 522

Query: 420 EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
            A+  F  M+  G  PD   + S++  CA+L  LE G+ +          +++ V+  +V
Sbjct: 523 GAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQL-----SAAIEVERDVV 577

Query: 480 L------VYAKCGC-INDANRVFDSM--HTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
           +      + AKCG  +++  R+F  M    +D++ W  +I   AQ+G G++AL+ +  M 
Sbjct: 578 VASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQ 637

Query: 531 ARGT-KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP-DHYACMIDLLGRSG 588
            R + +PD  TFV +L  CSHAGL E+    F    +V GI+  P +HYAC++D+LGR G
Sbjct: 638 QRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMG 697

Query: 589 KLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSN 648
            L EA+  + +M    D+ VW +LL AC  +GDLE GERAA    EL   +++ YV LSN
Sbjct: 698 YLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSN 757

Query: 649 MYSTAGKWEDAARVRKLMKSRGIRKE-PGCSWVETNSQVHIFISEDRGHPLRTDIYSKID 707
           +Y+ AG+WED+ RVR+ M  R ++K  PG S +   ++VH F + DR HP    IY++++
Sbjct: 758 IYAAAGRWEDSIRVREDMAERRVKKRVPGKSSIVVKNRVHEFFARDRSHPQSDAIYAELE 817

Query: 708 EIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLR 767
            +  LI+EAGYVPD    LH+VEEE KE  L YHSEKLA+AFGL+++P    IR+ KNLR
Sbjct: 818 RLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLISVPHRHSIRVIKNLR 877

Query: 768 VCGDCHTAMKYISAVYLRHIILRDSNRFHHF-KAGNCSCGDYW 809
           VC DCHTA K+I+ V  R I +RD NRFHHF K G CSCGDYW
Sbjct: 878 VCKDCHTATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 920



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/512 (24%), Positives = 230/512 (44%), Gaps = 40/512 (7%)

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
           TL  +LR C     L +G Q H   +K     N  +   LV MY+KC+ + +A   F   
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
              +    W T+I   S     F   + +  M++E    N+    +I+    A+++ D  
Sbjct: 86  -RSRGIATWNTLIAAQSSPAAVF---DLYTRMKLEERAENRPNKLTIIAVLGAIASGDPS 141

Query: 255 AQ-------------VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           +              VH  I  S  E +++V +AL+D Y KCG ++SA  +    ++ + 
Sbjct: 142 SSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDL 201

Query: 302 VSWNSMIVGFARQGFHKE-ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
           + WN+ I+  A      + AL L ++M    +  +  ++ ++L+    +  L  A+S+H+
Sbjct: 202 ICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHA 261

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
            + + GF G   V  AL+ MY + G++D +  VF  M  ++ +SW ++I   A  G    
Sbjct: 262 RVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSA 321

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ--VHAVFLKSGGCSSLSVDNSL 478
           A   +  M+  G  P+ +   + L A    +  + G+   +H     +G    + V  +L
Sbjct: 322 AFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTAL 381

Query: 479 VLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDY 538
           V +Y   G I+ A   FD++  +++++W A++     NG+ +EA++ +  M  +   P+ 
Sbjct: 382 VTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNK 441

Query: 539 ITFVGLLFACS--------HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKL 590
           ++++ +L  C         HA +  N  +  ES      I  G      ++ +  RSG L
Sbjct: 442 VSYLAVLGCCEDVSEARSIHAEVVGNGLFAQES-----SIANG------VVRMFARSGSL 490

Query: 591 IEAKALLDQMVGEPDATVWKALLSACRVHGDL 622
            EA A  D  V + D+  W   ++A     DL
Sbjct: 491 EEAVAAFDATVVK-DSVSWNTKVAALSAREDL 521



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 114/469 (24%), Positives = 195/469 (41%), Gaps = 84/469 (17%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           + ++G ID A   F+ +  ++  +WN M+ AY ++GR R                     
Sbjct: 385 YGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAR--------------------- 423

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT-CF 164
                     EA ELF  M+ +   P++ +   VL  C     +      H   +    F
Sbjct: 424 ----------EAMELFAAMKRQSLAPNKVSYLAVLGCCE---DVSEARSIHAEVVGNGLF 470

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
              + +  G+V M+A+   + EA   F      K+ V+W T +   S       AI  F 
Sbjct: 471 AQESSIANGVVRMFARSGSLEEAVAAFDATV-VKDSVSWNTKVAALSAREDLHGAITAFY 529

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKC 283
            M+ EG   ++FT  S++  CA +   + G  +   + ++   E +V V SA+++M AKC
Sbjct: 530 TMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKC 589

Query: 284 G-DLDSARRLLEYSEIDNE--VSWNSMIVGFARQGFHKEALSLFKKMHAR-DIKIDDFTY 339
           G  +D   RL      D +  V+WN+MI  +A+ G  ++AL LF+ M  R  ++ D  T+
Sbjct: 590 GSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTF 649

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM-- 397
            SVL+  +           H+ +V+ G                    + C F+   ++  
Sbjct: 650 VSVLSGCS-----------HAGLVEDG--------------------IHCFFLAREVLGI 678

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
           + + V  +  L+      G   EA  +   M +     D VV +S+L AC+    LE G+
Sbjct: 679 EQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPA---DSVVWTSLLGACSSYGDLEGGE 735

Query: 458 QVHAVFL---KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDV 503
           +    F+   +S     + + N    +YA  G   D+ RV + M  R V
Sbjct: 736 RAARAFIELYRSDSVGYVVLSN----IYAAAGRWEDSIRVREDMAERRV 780



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 87/202 (43%), Gaps = 18/202 (8%)

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
            ++ +L  C     L  G+Q+H   +K G   +  + N LV +Y+KC  ++DAN  F ++
Sbjct: 26  TLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSAL 85

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR---GTKPDYITFVGLLFACSHAGLAE 555
            +R + TW  LI   A           Y +M        +P+ +T + +L A +    + 
Sbjct: 86  RSRGIATWNTLI---AAQSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGAIASGDPSS 142

Query: 556 NARWYFESM-------DKVYGIKPGPDHY--ACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ++     S+       D + G     D +    ++D  G+ G  +E+   +   +  PD 
Sbjct: 143 SSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCG-CVESALEVFSRIQVPDL 201

Query: 607 TVWKALLSACRVHGDLELGERA 628
             W A + AC   G+ E  +RA
Sbjct: 202 ICWNAAIMAC--AGNDERPDRA 221


>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 276/748 (36%), Positives = 415/748 (55%), Gaps = 5/748 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM- 124
           D F  N MIA Y   G L EA +LF++ P +N  +W+SLI G+S  G  +EA+  F  + 
Sbjct: 244 DLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLL 303

Query: 125 -QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
              +G  P   T+  +L +CS +G +  G   HG A+K        V   L+DMY+KC C
Sbjct: 304 ESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGC 363

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG--VESNQFTFPSI 241
           + EA  LF+   + K+ V+W +MI  YS+ G+ F+  +  R M +E   +E N+ T  ++
Sbjct: 364 LSEAAILFRKI-ENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNL 422

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           L AC   S       +HG  L   F+    + +A I  YAKCG L  A  +       + 
Sbjct: 423 LPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSV 482

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
            SWN++I G A+ G   +AL  + +M    I  DDF+  S+L        L   K +H  
Sbjct: 483 SSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGF 542

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           +++ G E   FV  +L+ +Y            F  M DK+ + W ++++G + +    EA
Sbjct: 543 VLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEA 602

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           L  F  M   G+ PD + ++SIL AC++L+ L  G++VH   LK+       V  SL+ +
Sbjct: 603 LSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDM 662

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           YAK G +  + R+F+ ++ ++V +W  +I G   +G+G +A++ ++ M     +PD  TF
Sbjct: 663 YAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTF 722

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
           +G+L AC HAGL      Y   M  +Y ++P  +HYAC+ID+LGR+G+L EA   +++M 
Sbjct: 723 LGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMP 782

Query: 602 GEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
            EPDA +W +LLS+   + DLE+GE+ A  L  LE   A  Y+ LSN+Y+TAGKW+    
Sbjct: 783 EEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRM 842

Query: 662 VRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPD 721
           VR+ MK   ++K+ GCSW+E   +V+ FI+ +  +P   +I    + +   I E GY PD
Sbjct: 843 VRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGYTPD 902

Query: 722 MNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISA 781
            +  LH +EE  K   L  HSEK+A+ FG L   +G  +RI KNLR+C DCH A KYIS 
Sbjct: 903 CSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKYISK 962

Query: 782 VYLRHIILRDSNRFHHFKAGNCSCGDYW 809
              R I++RD+ RFHHFK G CSCGDYW
Sbjct: 963 AAKREIVIRDNKRFHHFKKGICSCGDYW 990



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 175/580 (30%), Positives = 301/580 (51%), Gaps = 27/580 (4%)

Query: 68  FTWNT-MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM-Q 125
           F  NT +I  Y+  G   E++ +F+    KN F W++L+ GY    L  EA   F ++  
Sbjct: 143 FVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELIS 202

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           +  ++P  +T   +++ C+ K  +  G+  HG A+K    ++ FV   ++ +Y KC  + 
Sbjct: 203 VTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLD 262

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM--RVEGVESNQFTFPSILT 243
           EA  LF   P+ +N ++W ++I G+S+NG+  +A   FR +    +G+  +  T  ++L 
Sbjct: 263 EAVELFDKMPE-QNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLP 321

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
            C+     D G  +HG  +  G    + V +ALIDMY+KCG L  A  L    E  + VS
Sbjct: 322 VCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVS 381

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARD--IKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           WNSMI  ++R+GF  E   L +KM   +  +++++ T  ++L       +L + +++H  
Sbjct: 382 WNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGY 441

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
            ++  F+  + +NNA I  YAK G+L  A  VF  M  K V SW ++I G A +G   +A
Sbjct: 442 SLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKA 501

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           L ++ +M   GI PD   + S+L AC  L +L++G+++H   L++G   +  V  SL+ +
Sbjct: 502 LDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSL 561

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           Y  C         F+ M  ++ + W A++ G +QN    EAL  + QML+ G +PD I  
Sbjct: 562 YFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAI 621

Query: 542 VGLLFACSH---AGLAENARWYFESMDKVYGIKPG--PDHY-AC-MIDLLGRSGKLIEAK 594
             +L ACS     GL +            + +K     D++ AC ++D+  +SG L  ++
Sbjct: 622 ASILGACSQLSALGLGKEVH--------CFALKNSLMEDNFVACSLMDMYAKSGFLGHSQ 673

Query: 595 ALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFE 634
            + +++ G+  A+ W  +++   VHG    G +A   LFE
Sbjct: 674 RIFNRLNGKEVAS-WNVMITGFGVHGQ---GNKAV-ELFE 708



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 194/409 (47%), Gaps = 35/409 (8%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           AL+D +S  G + EA  LF K+ ++   +WN+MI A                        
Sbjct: 353 ALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGA------------------------ 388

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEG--YRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
                  YS  G   E F+L  +M +E      ++ T+ N+L  C  +  L      HGY
Sbjct: 389 -------YSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGY 441

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFK 218
           +++  F     +    +  YAKC  +  AE++F    + K+  +W  +I G++QNG   K
Sbjct: 442 SLRHSFQYKELINNAFIAAYAKCGSLVFAEHVF-FGMNTKSVSSWNAVIGGHAQNGDPIK 500

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID 278
           A++ + +M   G+  + F+  S+L AC  +    +G ++HG +L +G E N +V  +L+ 
Sbjct: 501 ALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLS 560

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
           +Y  C      R   E     N V WN+M+ G+++     EALSLF++M +  ++ D+  
Sbjct: 561 LYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIA 620

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
             S+L   +    L   K VH   +K       FV  +L+DMYAK G L  +  +FN + 
Sbjct: 621 IASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLN 680

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSAC 447
            K+V SW  +ITG   HG   +A++ F DM+ S   PD      +L AC
Sbjct: 681 GKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQAC 729



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 163/314 (51%), Gaps = 6/314 (1%)

Query: 241 ILTACAAVSARDFGAQVHGCI-LSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
           +L  C      + G ++   + +SS F  +  + + LI MY+ CG    +R + +     
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKM-HARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
           N   WN+++ G+ R   + EA+  F ++    + + D+FT+P ++       D++  KSV
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           H + VK G     FV NA+I +Y K G LD A  +F+ M ++++ISW SLI G + +G +
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFW 292

Query: 419 EEALKYFSDMRIS--GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
            EA + F  +  S  G+ PD   + ++L  C+    ++ G  +H + +K G    L V N
Sbjct: 293 LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCN 352

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG--T 534
           +L+ +Y+KCGC+++A  +F  +  + V++W ++I   ++ G   E      +M       
Sbjct: 353 ALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELM 412

Query: 535 KPDYITFVGLLFAC 548
           + + +T + LL AC
Sbjct: 413 EVNEVTILNLLPAC 426



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 13/234 (5%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPF-----KNFFTWSSLIYGYSNYGLDIEAFE 119
           R+G   N+ +A    S     +K  +  T F     KN   W++++ GYS   L  EA  
Sbjct: 545 RNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALS 604

Query: 120 LFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYA 179
           LF QM  +G  P +  + ++L  CS    L  G++ H +A+K     + FV   L+DMYA
Sbjct: 605 LFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYA 664

Query: 180 KCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFP 239
           K   +  ++ +F    +GK   +W  MITG+  +G G KA+E F DM+    + ++FTF 
Sbjct: 665 KSGFLGHSQRIFNRL-NGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFL 723

Query: 240 SILTACA----AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
            +L AC          ++ AQ+         E  +   + +IDM  + G L+ A
Sbjct: 724 GVLQACCHAGLVSEGLNYLAQMQTLY---KLEPELEHYACVIDMLGRAGRLNEA 774



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 128/258 (49%), Gaps = 5/258 (1%)

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
           L V + F G   +N  LI MY+  G    + +VF+ + +K++  W +L++G   +  Y+E
Sbjct: 133 LCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDE 192

Query: 421 ALKYFSDM-RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
           A+  F ++  ++   PD+     ++ AC     +  G+ VH + +K G    L V N+++
Sbjct: 193 AIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMI 252

Query: 480 LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK--PD 537
            +Y KCG +++A  +FD M  +++I+W +LI G ++NG   EA + +  +L  G    PD
Sbjct: 253 ALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPD 312

Query: 538 YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALL 597
             T V LL  CS  G  +        M    G+         +ID+  + G L EA A+L
Sbjct: 313 VATMVTLLPVCSGEGNVD-VGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEA-AIL 370

Query: 598 DQMVGEPDATVWKALLSA 615
            + +       W +++ A
Sbjct: 371 FRKIENKSVVSWNSMIGA 388


>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 736

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 253/666 (37%), Positives = 389/666 (58%), Gaps = 9/666 (1%)

Query: 149 LQRGEQFHGYAIK-TCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG---KNHVAWT 204
            ++G+Q H + I  +  + N ++ T L   YA C  + +AE +F    DG   KN   W 
Sbjct: 75  FKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIF----DGIVLKNSFLWN 130

Query: 205 TMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS 264
            MI GY+ NG   K++  +R+M   G  ++ FT+P +L AC  +   + G +VH  ++  
Sbjct: 131 FMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVC 190

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLF 324
           G E+++YV ++L+ MYAK GD+ +AR + +     +  SWN+MI G+A+      A  +F
Sbjct: 191 GLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVF 250

Query: 325 KKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY-KFVNNALIDMYAK 383
             M    +  D  T   +L+  A    +   K +H   V+     Y KF  N+LI+MY  
Sbjct: 251 DLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCN 310

Query: 384 QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSI 443
              +  A  +F  ++ KD +SW S+I G A +G   E+L+ F  M + G  PD V   ++
Sbjct: 311 CNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAV 370

Query: 444 LSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDV 503
           L AC ++  L +G  +H+  +K G  ++  V  +LV +Y+KCG +  + RVFD M  + +
Sbjct: 371 LGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSL 430

Query: 504 ITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFES 563
           ++W+A++ G   +G+G+EA+   D M A    PD   F  +L ACSHAGL    +  F  
Sbjct: 431 VSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYK 490

Query: 564 MDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
           M+K Y +KP   HY+CM+DLLGR+G L EA  ++  M  +P + +W ALL+A R+H +++
Sbjct: 491 MEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIK 550

Query: 624 LGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETN 683
           L E +A  +F++ P     Y+ LSN+Y+   +W+D  RVR +++ +G++K PGCS++E +
Sbjct: 551 LAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELD 610

Query: 684 SQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSE 743
           + VH F+  D+ H    DIY+K++E+   +KEAGY PD +   ++VEEE KE  L  HSE
Sbjct: 611 NMVHRFLVGDKSHQQTEDIYAKLNELKQQLKEAGYKPDTSLVFYDVEEEVKEKMLWDHSE 670

Query: 744 KLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNC 803
           +LA+AF L+    G  IRI KNLRVCGDCHT  K IS +  R II+RD +RFHHF  G C
Sbjct: 671 RLAIAFALINTGPGTVIRITKNLRVCGDCHTVTKLISELTGREIIMRDIHRFHHFIKGFC 730

Query: 804 SCGDYW 809
           SCGDYW
Sbjct: 731 SCGDYW 736



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 150/478 (31%), Positives = 249/478 (52%), Gaps = 13/478 (2%)

Query: 43  LVDFSNSGEIDEAGQLFEKM---SDRDGFTW-NTMIAA-YANSGRLREAKKLFNETPFKN 97
           L  F+N+    +  QL   M   S  +  T+ NT +AA YA  G + +A+ +F+    KN
Sbjct: 66  LQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKN 125

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
            F W+ +I GY++ GL +++  L+ +M   G R   +T   VL+ C    L++ G + H 
Sbjct: 126 SFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHS 185

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
             +    + + +V   L+ MYAK   +  A  +F    + ++  +W TMI+GY++N    
Sbjct: 186 EVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAE-RDLTSWNTMISGYAKNADSG 244

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG-CILSSGFEANVYVQSAL 276
            A   F  M   G+ ++  T   +L+ACA + A   G  +HG  + +S    N +  ++L
Sbjct: 245 TAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSL 304

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           I+MY  C  +  ARRL E     + VSWNSMI+G+AR G   E+L LF++M       D 
Sbjct: 305 IEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQ 364

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
            T+ +VL        L    S+HS +VK GF+    V  AL+DMY+K G+L C+  VF+ 
Sbjct: 365 VTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDE 424

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
           M DK ++SW++++ G   HG   EA+     M+ + + PD+ V +SILSAC+   ++  G
Sbjct: 425 MPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEG 484

Query: 457 QQVHAVFLKSGGCS-SLSVDNSLVLVYAKCGCINDANRVFDSMH---TRDVITWTALI 510
           +++     K      +LS  + +V +  + G +++A  +  +M    T D+  W AL+
Sbjct: 485 KEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDI--WAALL 540


>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
 gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
          Length = 703

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 280/765 (36%), Positives = 417/765 (54%), Gaps = 88/765 (11%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           F+  G+ID A  +F+ +  +   +WN ++A Y ++ R  EA+KLF++ P +N  +W+ L+
Sbjct: 26  FARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPERNTISWNGLV 85

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            GY   G+  EA ++F +M      P +    NV+   S+                    
Sbjct: 86  SGYVKNGMISEARKVFDKM------PER----NVVSWTSM-------------------- 115

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
           +  +V  GL+D         EAE LF   P+ KN V+WT M+ G  ++G   +A   F  
Sbjct: 116 VRGYVQEGLID---------EAELLFWRMPE-KNVVSWTVMLGGLIEDGRVDEARRLFDM 165

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           + V+ V ++      + +      AR+        I     + NV   +++I  YA    
Sbjct: 166 IPVKDVVASTNMIGGLCSEGRLSEARE--------IFDEMPQRNVVAWTSMISGYAMNNK 217

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           +D AR+L E     NEV+W +M+ G+ R G   EA  LFK M  +           V  C
Sbjct: 218 VDVARKLFEVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAMPVK----------PVAAC 267

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
                                        N +I  +   G +  A  VF+ M++KD  +W
Sbjct: 268 -----------------------------NGMIMGFGLNGEVGKARWVFDQMKEKDDGTW 298

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
           ++LI      G   EAL  FS M+  G+ P+   + SILS C  L  L+ G+QVH+  ++
Sbjct: 299 SALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVR 358

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
           S     + V + L+ +Y KCG +    RVFD   ++D++ W ++I G AQ+G G++AL+ 
Sbjct: 359 SHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEV 418

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
           + +M + G  PD ITF+G+L AC + G  +     FESM   Y +    +HYACM+DLLG
Sbjct: 419 FHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLG 478

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ 645
           R+GKL EA  L++ M  E DA VW ALLSACR H +L+L E AA  L +LEP +A PY+ 
Sbjct: 479 RAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYIL 538

Query: 646 LSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG-HPLRTDIYS 704
           LSN+Y++  +W+D A +RK M++R + K PGCSW+E +++VH+F       HP    I  
Sbjct: 539 LSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASHPEHEMIMK 598

Query: 705 KIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFK 764
           K++++   ++EAGY PD +F +H+V+EE K   L +HSEK+AVA+GLL +P G PIR+ K
Sbjct: 599 KLEKLGASLREAGYCPDGSFVMHDVDEEDKVHSLRHHSEKMAVAYGLLKVPVGKPIRVMK 658

Query: 765 NLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           NLRVCGDCH+A+K I+ V  R IILRD+NRFHHFK G CSC D+W
Sbjct: 659 NLRVCGDCHSAIKLIAQVTGREIILRDANRFHHFKDGLCSCRDFW 703



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 140/510 (27%), Positives = 238/510 (46%), Gaps = 75/510 (14%)

Query: 34  KPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNET 93
           K  +  N  +  + ++    EA +LF+KM +R+  +WN +++ Y  +G + EA+K+F++ 
Sbjct: 45  KTVTSWNAIVAGYFHNKRPAEAQKLFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKM 104

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ---------LEGYRPSQYTLDNVLRL-- 142
           P +N  +W+S++ GY   GL  EA  LFW+M          + G       +D   RL  
Sbjct: 105 PERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLFD 164

Query: 143 -CSLKGLLQRGEQFHGY-------AIKTCFD----LNAFVVTGLVDMYAKCKCIFEAEYL 190
              +K ++       G          +  FD     N    T ++  YA    +  A  L
Sbjct: 165 MIPVKDVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKL 224

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F++ PD KN V WT M+ GY+++G   +A E F+ M V+ V            AC     
Sbjct: 225 FEVMPD-KNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPV-----------AAC----- 267

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
                  +G I+  GF  N              G++  AR + +  +  ++ +W+++I  
Sbjct: 268 -------NGMIM--GFGLN--------------GEVGKARWVFDQMKEKDDGTWSALIKI 304

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           + R+GF  EAL+LF  M    ++ +  +  S+L+   S   L++ + VHS +V++ F+  
Sbjct: 305 YERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLD 364

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
            +V++ LI MY K G+L     VF+    KD++ W S+I G A HG  E+AL+ F +M  
Sbjct: 365 IYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFS 424

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS------LVLVYAK 484
           SG  PD +    +LSAC     ++ G ++          S   VD        +V +  +
Sbjct: 425 SGAAPDEITFIGVLSACGYTGKVKEGLEIFESMK-----SKYQVDQKTEHYACMVDLLGR 479

Query: 485 CGCINDANRVFDSMHTR-DVITWTALIMGC 513
            G +N+A  + ++M    D I W AL+  C
Sbjct: 480 AGKLNEAMNLIENMPVEADAIVWGALLSAC 509



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 136/279 (48%), Gaps = 36/279 (12%)

Query: 33  VKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE 92
           VKP +  N  ++ F  +GE+ +A  +F++M ++D  TW+ +I  Y               
Sbjct: 261 VKPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERK------------ 308

Query: 93  TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
                              G ++EA  LF  MQ EG RP+  ++ ++L +C     L  G
Sbjct: 309 -------------------GFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHG 349

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
            Q H   +++ FDL+ +V + L+ MY KC  +   + +F  F   K+ V W ++I GY+Q
Sbjct: 350 RQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRF-SSKDIVMWNSIIAGYAQ 408

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYV 272
           +G+G KA+E F +M   G   ++ TF  +L+AC        G ++    + S ++ +   
Sbjct: 409 HGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFES-MKSKYQVDQKT 467

Query: 273 Q--SALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
           +  + ++D+  + G L+ A  L+E   ++ + + W +++
Sbjct: 468 EHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALL 506



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 19/205 (9%)

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
           SS ++    +  +A+ G I+ A  +FD + ++ V +W A++ G   N +  EA + +D+M
Sbjct: 14  SSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKM 73

Query: 530 LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGK 589
             R T    I++ GL+      G+   AR  F+ M +   +      +  M+    + G 
Sbjct: 74  PERNT----ISWNGLVSGYVKNGMISEARKVFDKMPERNVVS-----WTSMVRGYVQEGL 124

Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNM 649
           + EA+ L  +M  E +   W  +L      G ++   R    LF++ P+  +  V  +NM
Sbjct: 125 IDEAELLFWRM-PEKNVVSWTVMLGGLIEDGRVDEARR----LFDMIPVKDV--VASTNM 177

Query: 650 YS---TAGKWEDAARVRKLMKSRGI 671
                + G+  +A  +   M  R +
Sbjct: 178 IGGLCSEGRLSEAREIFDEMPQRNV 202


>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
          Length = 698

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 260/699 (37%), Positives = 395/699 (56%), Gaps = 67/699 (9%)

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           M+AK   + +A  +F   P+ ++ V+WT M+ G ++ G   +AI+   DM  +G    QF
Sbjct: 1   MFAKSGRLADARGVFAEMPE-RDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQF 59

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD----------- 285
           T  ++L++CA   A   G +VH  ++  G  + V V +++++MY KCGD           
Sbjct: 60  TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERM 119

Query: 286 --------------------LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
                               +D A  L E     + VSWN+MI G+ + G   +AL LF 
Sbjct: 120 PVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFS 179

Query: 326 KM-HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
           +M H   +  D+FT  SVL+  A+  ++   K VH+ I++T       V NALI  YAK 
Sbjct: 180 RMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKS 239

Query: 385 G---------------------------------NLDCAFMVFNLMQDKDVISWTSLITG 411
           G                                 +++ A  +F +M ++DV++WT++I G
Sbjct: 240 GSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVG 299

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
              +G  +EA+  F  M   G  P+   ++++LS CA L  L++G+Q+H   ++S    S
Sbjct: 300 YEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQS 359

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQML 530
            SV N+++ +YA+ G    A R+FD +  R + ITWT++I+  AQ+G+G+EA+  +++ML
Sbjct: 360 SSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEML 419

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKL 590
             G +PD IT+VG+L ACSHAG     + Y++ +   + I P   HYACM+DLL R+G  
Sbjct: 420 RAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLF 479

Query: 591 IEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMY 650
            EA+  + +M  EPDA  W +LLSACRVH + EL E AA  L  ++P N+  Y  ++N+Y
Sbjct: 480 SEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVY 539

Query: 651 STAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIM 710
           S  G+W DAAR+ K  K + +RKE G SW    S++H+F ++D  HP R  +Y+    + 
Sbjct: 540 SACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMW 599

Query: 711 LLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCG 770
             IK AG+VPD+   LH+V++E KE  L+ HSEKLA+AFGL++ P+   +R+ KNLRVC 
Sbjct: 600 EEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCN 659

Query: 771 DCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           DCH A+K IS V  R II+RD+ RFHHF+ G CSC DYW
Sbjct: 660 DCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 698



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 169/620 (27%), Positives = 277/620 (44%), Gaps = 118/620 (19%)

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
           +A SGRL +A+ +F E P ++  +W+ ++ G +  G   EA +    M  +G+ P+Q+TL
Sbjct: 2   FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTL 61

Query: 137 DNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC------KCIFE---- 186
            NVL  C++      G + H + +K        V   +++MY KC        +FE    
Sbjct: 62  TNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPV 121

Query: 187 ---------------------AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
                                AE LF+  PD ++ V+W  MI GY+QNG   KA++ F  
Sbjct: 122 RSVSSWNAMVSLNTHLGRMDLAESLFESMPD-RSIVSWNAMIAGYNQNGLDAKALKLFSR 180

Query: 226 MRVE-GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
           M  E  +  ++FT  S+L+ACA +     G QVH  IL +    N  V +ALI  YAK G
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240

Query: 285 DLDSARRLLEYS-EID--------------------------------NEVSWNSMIVGF 311
            +++ARR+++ S E D                                + V+W +MIVG+
Sbjct: 241 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
            + G + EA+ LF+ M     + + +T  +VL+  AS   L+  K +H   +++  E   
Sbjct: 301 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSS 360

Query: 372 FVNNALIDMYAKQGNLDCAFMVFN-LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
            V+NA+I MYA+ G+   A  +F+ +   K+ I+WTS+I   A HG  EEA+  F +M  
Sbjct: 361 SVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLR 420

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
           +G+ PD +    +LSAC+           HA                        G +N+
Sbjct: 421 AGVEPDRITYVGVLSACS-----------HA------------------------GFVNE 445

Query: 491 ANRVFDSMHTRDVIT-----WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
             R +D +     I      +  ++   A+ G   EA +F  +M     +PD I +  LL
Sbjct: 446 GKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRM---PVEPDAIAWGSLL 502

Query: 546 FACSHAGLAENARWYFESMDKVYGIKP-GPDHYACMIDLLGRSGKLIEA----KALLDQM 600
            AC    + +NA     + +K+  I P     Y+ + ++    G+  +A    KA  ++ 
Sbjct: 503 SACR---VHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKA 559

Query: 601 VGEPDATVWKALLSACRVHG 620
           V +     W  + S   V G
Sbjct: 560 VRKETGFSWTHIRSKIHVFG 579



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/448 (28%), Positives = 219/448 (48%), Gaps = 42/448 (9%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  L  +   G+ + A  +FE+M  R   +WN M++   + GR+  A+ LF   P ++  
Sbjct: 97  NSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIV 156

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
           +W+++I GY+  GLD +A +LF +M  E    P ++T+ +VL  C+  G ++ G+Q H Y
Sbjct: 157 SWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAY 216

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF--------------------------- 191
            ++T    N+ V   L+  YAK   +  A  +                            
Sbjct: 217 ILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDME 276

Query: 192 ---KMFP--DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
              +MF   + ++ VAWT MI GY QNG   +AI+ FR M   G E N +T  ++L+ CA
Sbjct: 277 SAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCA 336

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE-VSWN 305
           +++  D+G Q+H   + S  E +  V +A+I MYA+ G    ARR+ +      E ++W 
Sbjct: 337 SLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWT 396

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           SMIV  A+ G  +EA+ LF++M    ++ D  TY  VL+  +    +N  K  +  I   
Sbjct: 397 SMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNE 456

Query: 366 GFEGYKFVNNA-LIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALK 423
                +  + A ++D+ A+ G    A      M  + D I+W SL++ C  H + E  L 
Sbjct: 457 HQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAE--LA 514

Query: 424 YFSDMRISGICPD----HVVVSSILSAC 447
             +  ++  I P+    +  ++++ SAC
Sbjct: 515 ELAAEKLLSIDPNNSGAYSAIANVYSAC 542



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 139/277 (50%), Gaps = 5/277 (1%)

Query: 37  SDLNRALVD-FSNSGEIDEAGQLFEKM--SDRDGFTWNTMIAAYANSGRLREAKKLFNET 93
           S +  AL+  ++ SG ++ A ++ ++   +D +  ++  ++  Y   G +  A+++F   
Sbjct: 226 SQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVM 285

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE 153
             ++   W+++I GY   G + EA +LF  M   G  P+ YTL  VL +C+    L  G+
Sbjct: 286 NNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGK 345

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQN 213
           Q H  AI++  + ++ V   ++ MYA+      A  +F      K  + WT+MI   +Q+
Sbjct: 346 QIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQH 405

Query: 214 GYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
           G G +A+  F +M   GVE ++ T+  +L+AC+     + G + +  I +    A     
Sbjct: 406 GQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSH 465

Query: 274 SA-LIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
            A ++D+ A+ G    A+  +    ++ + ++W S++
Sbjct: 466 YACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLL 502


>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 763

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 282/780 (36%), Positives = 424/780 (54%), Gaps = 87/780 (11%)

Query: 61  KMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFEL 120
           K  D D  TWN  I+++  +G    A ++FN  P ++  +++++I GY            
Sbjct: 40  KFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGY------------ 87

Query: 121 FWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK 180
                    R ++++L   L              F     +  F  N  ++TG    Y +
Sbjct: 88  --------LRNAKFSLARDL--------------FDKMPERDLFSWNV-MLTG----YVR 120

Query: 181 CKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
            + + EA  LF + P  K+ V+W  M++GY+QNG+  +A E F  M       N  ++  
Sbjct: 121 NRRLGEAHKLFDLMPK-KDVVSWNAMLSGYAQNGFVDEAREVFNKM----PHRNSISWNG 175

Query: 241 ILTACA-----AVSARDFGAQVH------GCILSSGFEAN----------------VYVQ 273
           +L A         + R F +Q +       C++    + N                V   
Sbjct: 176 LLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISW 235

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
           + +I  YA+ GDL  A+RL   S I +  +W +M+ G+ + G   EA   F +M  ++  
Sbjct: 236 NTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKN-- 293

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN----NALIDMYAKQGNLDC 389
             + +Y ++L  +     +        +I    FE     N    N +I  Y + G +  
Sbjct: 294 --EISYNAMLAGYVQYKKM--------VIAGELFEAMPCRNISSWNTMITGYGQNGGIAQ 343

Query: 390 AFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE 449
           A  +F++M  +D +SW ++I+G A +G YEEAL  F +M+  G   +    S  LS CA+
Sbjct: 344 ARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCAD 403

Query: 450 LTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTAL 509
           +  LE G+QVH   +K+G  +   V N+L+ +Y KCG  ++AN VF+ +  +DV++W  +
Sbjct: 404 IAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTM 463

Query: 510 IMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG 569
           I G A++G G++AL  ++ M   G KPD IT VG+L ACSH+GL +    YF SMD+ Y 
Sbjct: 464 IAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYN 523

Query: 570 IKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAA 629
           +KP   HY CMIDLLGR+G+L EA+ L+  M  +P A  W ALL A R+HG+ ELGE+AA
Sbjct: 524 VKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAA 583

Query: 630 NNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIF 689
             +F++EP N+  YV LSN+Y+ +G+W D  ++R  M+  G++K  G SWVE  +++H F
Sbjct: 584 EMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTF 643

Query: 690 ISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAF 749
              D  HP +  IY+ ++E+ L ++  GYV      LH+VEEE KE  L YHSEKLAVAF
Sbjct: 644 SVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAF 703

Query: 750 GLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           G+LT+P G PIR+ KNLRVC DCH A+K+IS +  R IILRDS+RFHHF  G CSCGDYW
Sbjct: 704 GILTIPAGRPIRVMKNLRVCQDCHNAIKHISKIVGRLIILRDSHRFHHFSEGICSCGDYW 763



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 125/370 (33%), Positives = 202/370 (54%), Gaps = 11/370 (2%)

Query: 52  IDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNY 111
           + +A QLF++M  RD  +WNTMI+ YA  G L +AK+LFNE+P ++ FTW++++ GY   
Sbjct: 217 LGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQN 276

Query: 112 GLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV 171
           G+  EA + F +M ++        L   ++    K ++  GE F     +     N  ++
Sbjct: 277 GMVDEARKYFDEMPVKNEISYNAMLAGYVQY---KKMVIAGELFEAMPCRNISSWNT-MI 332

Query: 172 TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV 231
           TG    Y +   I +A  LF M P  ++ V+W  +I+GY+QNG+  +A+  F +M+ +G 
Sbjct: 333 TG----YGQNGGIAQARKLFDMMPQ-RDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGE 387

Query: 232 ESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR 291
            SN+ TF   L+ CA ++A + G QVHG ++ +GFE   +V +AL+ MY KCG  D A  
Sbjct: 388 SSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEAND 447

Query: 292 LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNI 350
           + E  E  + VSWN+MI G+AR GF ++AL LF+ M    +K D+ T   VL+ C  S +
Sbjct: 448 VFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGL 507

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA-FMVFNLMQDKDVISWTSLI 409
                +  +S+      +        +ID+  + G L+ A  ++ N+  D    SW +L+
Sbjct: 508 IDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALL 567

Query: 410 TGCAYHGSYE 419
                HG+ E
Sbjct: 568 GASRIHGNTE 577



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 217/437 (49%), Gaps = 40/437 (9%)

Query: 35  PASDL---NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN 91
           P  DL   N  L  +  +  + EA +LF+ M  +D  +WN M++ YA +G + EA+++FN
Sbjct: 104 PERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFN 163

Query: 92  ETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQR 151
           + P +N  +W+ L+  Y + G   EA  LF          SQ   + +   C + G ++R
Sbjct: 164 KMPHRNSISWNGLLAAYVHNGRLKEARRLF---------ESQSNWELISWNCLMGGYVKR 214

Query: 152 G------EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTT 205
                  + F    ++     N      ++  YA+   + +A+ LF   P  ++   WT 
Sbjct: 215 NMLGDARQLFDRMPVRDVISWNT-----MISGYAQVGDLSQAKRLFNESPI-RDVFTWTA 268

Query: 206 MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
           M++GY QNG   +A + F +M V+    N+ ++ ++L             ++        
Sbjct: 269 MVSGYVQNGMVDEARKYFDEMPVK----NEISYNAMLAGYVQYKKMVIAGEL-------- 316

Query: 266 FEA----NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEAL 321
           FEA    N+   + +I  Y + G +  AR+L +     + VSW ++I G+A+ G ++EAL
Sbjct: 317 FEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEAL 376

Query: 322 SLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMY 381
           ++F +M       +  T+   L+  A    L   K VH  +VK GFE   FV NAL+ MY
Sbjct: 377 NMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMY 436

Query: 382 AKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVS 441
            K G+ D A  VF  +++KDV+SW ++I G A HG   +AL  F  M+ +G+ PD + + 
Sbjct: 437 FKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMV 496

Query: 442 SILSACAELTVLEFGQQ 458
            +LSAC+   +++ G +
Sbjct: 497 GVLSACSHSGLIDRGTE 513



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/281 (30%), Positives = 145/281 (51%), Gaps = 9/281 (3%)

Query: 33  VKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE 92
           VK     N  L  +    ++  AG+LFE M  R+  +WNTMI  Y  +G + +A+KLF+ 
Sbjct: 291 VKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDM 350

Query: 93  TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
            P ++  +W+++I GY+  G   EA  +F +M+ +G   ++ T    L  C+    L+ G
Sbjct: 351 MPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELG 410

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
           +Q HG  +K  F+   FV   L+ MY KC    EA  +F+   + K+ V+W TMI GY++
Sbjct: 411 KQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEE-KDVVSWNTMIAGYAR 469

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYV 272
           +G+G +A+  F  M+  GV+ ++ T   +L+AC+     D G +      S   + NV  
Sbjct: 470 HGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEY---FYSMDRDYNVKP 526

Query: 273 QSA----LIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
            S     +ID+  + G L+ A  L+     D    SW +++
Sbjct: 527 TSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALL 567


>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 275/696 (39%), Positives = 396/696 (56%), Gaps = 35/696 (5%)

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP--DGKNHVAWTTM 206
           LQ     H   IKT      + ++ L++            Y   +F      N + W TM
Sbjct: 15  LQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTM 74

Query: 207 ITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF 266
             G++ +     A+  +  M   G+  N +TFP +L +CA   A   G Q+HG +L  G+
Sbjct: 75  FRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGY 134

Query: 267 EANVYVQSALIDMYAKCGDLDSARRLLEYSE----------------------------- 297
           + ++YV ++LI MY + G L+ AR++ + S                              
Sbjct: 135 DLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDE 194

Query: 298 --IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
             I + VSWN+MI G+A  G +KEAL LFK+M   +++ D+ T  SV++  A +  +   
Sbjct: 195 IPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELG 254

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           + VHS I   GF     + NALID+Y K G ++ A  +F  +  KDVISW +LI G  + 
Sbjct: 255 RQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHM 314

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK--SGGCSSLS 473
             Y+EAL  F +M  SG  P+ V + SIL ACA L  +E G+ +H    K   G  ++ S
Sbjct: 315 NLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASS 374

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
              SL+ +YAKCG I  A +VFDS+  R + +W A+I G A +G+   A   + +M    
Sbjct: 375 HRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNE 434

Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
            +PD ITFVGLL ACSH+G+ +  R  F SM + Y I P  +HY CMIDLLG SG   EA
Sbjct: 435 IEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEA 494

Query: 594 KALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTA 653
           + +++ M  EPD  +W +LL AC+++ ++ELGE  A NL ++EP N   YV LSN+Y+TA
Sbjct: 495 EEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATA 554

Query: 654 GKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLI 713
           G+W + A++R L+  +G++K PGCS +E +S VH FI  D+ HP   +IY  ++E+ +L+
Sbjct: 555 GRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLL 614

Query: 714 KEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCH 773
           +EAG+VPD +  L  +EEE KE  L +HSEKLA+AFGL++   G  + I KNLRVC +CH
Sbjct: 615 EEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCH 674

Query: 774 TAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            A K IS +Y R II RD  RFHHF+ G CSC DYW
Sbjct: 675 EATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 153/579 (26%), Positives = 258/579 (44%), Gaps = 101/579 (17%)

Query: 55  AGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLD 114
           A  +FE + + +   WNTM   +A S                                  
Sbjct: 56  AISVFETIQEPNLLIWNTMFRGHALSSD-------------------------------P 84

Query: 115 IEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
           + A  L+  M   G  P+ YT   +L+ C+     + G+Q HG+ +K  +DL+ +V T L
Sbjct: 85  VSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSL 144

Query: 175 VDMYAKCKCIFEAEYLF----------------------------KMFPD--GKNHVAWT 204
           + MY +   + +A  +F                            KMF +   K+ V+W 
Sbjct: 145 ISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWN 204

Query: 205 TMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS 264
            MI+GY++ G   +A+E F++M    V  ++ T  S+++ACA  ++ + G QVH  I   
Sbjct: 205 AMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDH 264

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLF 324
           GF +N+ + +ALID+Y KCG++++A  L E     + +SWN++I G+     +KEAL LF
Sbjct: 265 GFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLF 324

Query: 325 KKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK--TGFEGYKFVNNALIDMYA 382
           ++M       +D T  S+L   A    +   + +H  I K   G         +LIDMYA
Sbjct: 325 QEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYA 384

Query: 383 KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
           K G+++ A  VF+ + ++ + SW ++I G A HG    A   FS MR + I PD +    
Sbjct: 385 KCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVG 444

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
           +LSAC+   +L+ G+ +           S+  D  +       GC+ D            
Sbjct: 445 LLSACSHSGMLDLGRHIF---------RSMKEDYKITPKLEHYGCMID------------ 483

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
                  ++G   +G  KEA +  + M     +PD + +  LL AC      E    Y +
Sbjct: 484 -------LLG--HSGLFKEAEEMINTM---EMEPDGVIWCSLLKACKMYANVELGESYAQ 531

Query: 563 SMDKVYGIKPGPDHYACMIDLL---GRSGKLIEAKALLD 598
           ++ K+    PG   Y  + ++    GR  ++ + +ALL+
Sbjct: 532 NLIKIEPKNPGS--YVLLSNIYATAGRWNEVAKIRALLN 568



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 226/446 (50%), Gaps = 23/446 (5%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +  +G +++A ++F++ S RD  ++  +I  YA+ G +  A+K+F+E P K+  +W+++I
Sbjct: 148 YVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMI 207

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            GY+  G + EA ELF +M     RP + T+ +V+  C+    ++ G Q H +     F 
Sbjct: 208 SGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFG 267

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            N  +V  L+D+Y KC  +  A  LF+     K+ ++W T+I GY+      +A+  F++
Sbjct: 268 SNLKIVNALIDLYIKCGEVETACGLFEGL-SYKDVISWNTLIGGYTHMNLYKEALLLFQE 326

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS--SGFEANVYVQSALIDMYAKC 283
           M   G   N  T  SIL ACA + A + G  +H  I     G       +++LIDMYAKC
Sbjct: 327 MLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKC 386

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
           GD+++A+++ +     +  SWN+MI GFA  G    A  +F +M   +I+ DD T+  +L
Sbjct: 387 GDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLL 446

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN-----ALIDMYAKQGNLDCAFMVFNLMQ 398
           +  + +  L+  +     I ++  E YK          +ID+    G    A  + N M+
Sbjct: 447 SACSHSGMLDLGRH----IFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTME 502

Query: 399 -DKDVISWTSLITGCAYHGSYEEALKYFSDM-RISGICP-DHVVVSSILSACAELTVLEF 455
            + D + W SL+  C  + + E    Y  ++ +I    P  +V++S+I +       +  
Sbjct: 503 MEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEV-- 560

Query: 456 GQQVHAVFLKSG-----GCSSLSVDN 476
             ++ A+    G     GCSS+ +D+
Sbjct: 561 -AKIRALLNDKGMKKVPGCSSIEIDS 585


>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 258/700 (36%), Positives = 391/700 (55%), Gaps = 13/700 (1%)

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA +   +M       + ++   +   C     L  G   H    +T  + +  +   L+
Sbjct: 70  EAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLL 129

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
            MY  C    + + +F      KN V+W  +I+ Y++NG   KAI  F DM+  G+  N 
Sbjct: 130 RMYCDCGSCIDVQKVFDEML-MKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNS 188

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
             + S+L +C   S  + G Q+H  ++ +   AN+ V++A+ +MY +CG L+ A+ + + 
Sbjct: 189 AVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDG 248

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
            +  N V+W  ++VG+ +    + AL LF +M    +++D+F +  VL       D +  
Sbjct: 249 MDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMG 308

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           + +HS IVK G E    V   L+D Y K G+++ A+  F  + + + +SW++LI+G +  
Sbjct: 309 RQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQS 368

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G  E+ +K F+ +R  G+  +  + +S+  ACA    L  G Q H   +K G  S L  +
Sbjct: 369 GRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGE 428

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           +++V +Y+KCG ++ A R F+S+   D + WTA+I G A +G   EAL F+ +M + G +
Sbjct: 429 SAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVR 488

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           P+ +TF+ +L ACSH+GL   A+ Y  SM + YG+KP  DHY CMID   R+G L EA  
Sbjct: 489 PNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALE 548

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
           L+++M  EPDA  WK+LL  C  H DL+LG+ AA NLF L+P +   Y+ L N+YS  GK
Sbjct: 549 LINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGK 608

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
           WE+A  VRKLM  R ++KE  CSW+    QVH F+  DR HP    IYSK++E       
Sbjct: 609 WEEAGHVRKLMAERELKKEVSCSWISVKGQVHRFVVGDRHHPQTEAIYSKLEEFKC---- 664

Query: 716 AGYVPDMNFALHNVEEE------GKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVC 769
              V D    L N E++       ++  L  HSEKLA+AFGL++    API +FKNLR C
Sbjct: 665 --SVIDSPVRLLNEEDDVSCSLSARKEQLLDHSEKLAIAFGLISTEDNAPILVFKNLRAC 722

Query: 770 GDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            DCH   K +S V  R I++RDS RFHHFK+G CSC DYW
Sbjct: 723 RDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCNDYW 762



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 137/460 (29%), Positives = 241/460 (52%), Gaps = 5/460 (1%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
           +L   + +  G   N ++  Y + G   + +K+F+E   KN  +W  +I  Y+  G   +
Sbjct: 112 RLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEK 171

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
           A  LF  MQ  G RP+     ++L+ C     L+ G+Q H + I+   + N  V T + +
Sbjct: 172 AIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICN 231

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           MY +C  +  A+ +F    D +N V WT ++ GY+Q      A+E F  M +EGVE ++F
Sbjct: 232 MYVRCGWLEGAKLVFDGM-DAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEF 290

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
            F  +L  C  +   D G Q+H  I+  G E+ V V + L+D Y KCGD++SA R     
Sbjct: 291 VFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRI 350

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              N+VSW+++I GF++ G  ++ + +F  + +  + ++ F Y SV    A+  +LN   
Sbjct: 351 SEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGS 410

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
             H   +K G   Y +  +A++ MY+K G LD A   F  + + D ++WT++I+G AYHG
Sbjct: 411 QAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHG 470

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD- 475
           +  EAL +F  M+  G+ P+ V   ++L+AC+   ++   +Q      +  G    ++D 
Sbjct: 471 NAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKP-TIDH 529

Query: 476 -NSLVLVYAKCGCINDANRVFDSM-HTRDVITWTALIMGC 513
            + ++  Y++ G + +A  + + M    D ++W +L+ GC
Sbjct: 530 YDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGC 569



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 158/323 (48%), Gaps = 10/323 (3%)

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N  +V  ++QG  KEA    K+M   D+ +   +Y  +         L + + +H  + +
Sbjct: 56  NLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRR 115

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
           T       + N L+ MY   G+      VF+ M  K+++SW  +I+  A +G  E+A++ 
Sbjct: 116 TVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRL 175

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           FSDM+ SGI P+  V  S+L +C   + LE G+Q+H+  +++   ++++V+ ++  +Y +
Sbjct: 176 FSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVR 235

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG +  A  VFD M  ++ +TWT L++G  Q  K + AL+ + +M   G + D   F  +
Sbjct: 236 CGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIV 295

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC----MIDLLGRSGKLIEAKALLDQM 600
           L  C   GL +   W        + +K G +        ++D   + G +  A     + 
Sbjct: 296 LKVC--CGLED---WDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGR- 349

Query: 601 VGEPDATVWKALLSACRVHGDLE 623
           + EP+   W AL+S     G LE
Sbjct: 350 ISEPNDVSWSALISGFSQSGRLE 372



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 66/169 (39%), Gaps = 40/169 (23%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +S  G +D A + FE + + D   W  +I+                              
Sbjct: 435 YSKCGRLDYARRAFESIDEPDAVAWTAIIS------------------------------ 464

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG-----YAI 160
            GY+ +G   EA   F +MQ  G RP+  T   VL  CS  GL+   +Q+ G     Y +
Sbjct: 465 -GYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGV 523

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
           K   D        ++D Y++   + EA  L    P   + ++W +++ G
Sbjct: 524 KPTIDH----YDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGG 568


>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Vitis vinifera]
 gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 267/749 (35%), Positives = 419/749 (55%), Gaps = 2/749 (0%)

Query: 62  MSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELF 121
           + +R+  +    +++Y   G ++ A  LF      + F W+ +I G+ + GL  +A + +
Sbjct: 55  LVERNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFY 114

Query: 122 WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
            +M+  G R   +T   V++ C     L  GE+ HG  IK+  DL+ ++   L+ MYAK 
Sbjct: 115 HRMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKI 174

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
            CI  AE +F+  P  ++ V+W +MI+GY   G G++++ CFR+M+  G++ ++F+   I
Sbjct: 175 GCIESAEMVFREMP-VRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGI 233

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           L AC+       G ++H  ++ S  E +V VQ++L+DMYAKCG +D A RL +     + 
Sbjct: 234 LGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSI 293

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMH-ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
           V+WN+MI G++      E+ +  +KM     +  D  T  ++L   A    +   KSVH 
Sbjct: 294 VAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHG 353

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
             ++ GF  +  +  AL+DMY + G L  A  +F  M ++++ISW ++I     +G   +
Sbjct: 354 FAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRK 413

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
           A+  F D+    + PD   ++SIL A AEL  L   +Q+H    K    S+  V NS+V 
Sbjct: 414 AMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVF 473

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           +Y KCG +  A  +FD M  +DVI+W  +IM  A +G G+ +++ + +M  +G +P+  T
Sbjct: 474 MYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGST 533

Query: 541 FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
           FV LL +CS AGL      YF SM + Y I PG +HY C++DL+GR+G L  AK  +++M
Sbjct: 534 FVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEM 593

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAA 660
              P A +W +LL+A R  GD+EL E AA ++  LE  N   YV LSNMY+ AG+WED  
Sbjct: 594 PLAPTARIWGSLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVE 653

Query: 661 RVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
           R++  MK  G+ K  GCS V+ +S+   F+++DR       +Y  +D I   I E  YV 
Sbjct: 654 RIKFHMKKEGLEKSVGCSVVDLSSKTFRFVNQDRSDNEINMVYDVLDIISKKIGEDVYVH 713

Query: 721 DMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYIS 780
            +     +  E+ +      HS +LA+ FGL++   G P+ + KN+R+C  CH   K IS
Sbjct: 714 SLTKFRPSDLEKKRANSAKSHSLRLAICFGLISTTIGNPVLVRKNIRICEACHRFAKRIS 773

Query: 781 AVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
               R II+RDS  FHHF  G+CSCGDYW
Sbjct: 774 ETTKREIIVRDSKIFHHFNGGHCSCGDYW 802



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 132/394 (33%), Positives = 218/394 (55%), Gaps = 2/394 (0%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G++ +   D D +  N++I  YA  G +  A+ +F E P ++  +W+S+I GY + G   
Sbjct: 150 GKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVRDLVSWNSMISGYVSVGDGW 209

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
            +   F +MQ  G +  ++++  +L  CSL+G L+ G++ H   +++  +L+  V T LV
Sbjct: 210 RSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLV 269

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESN 234
           DMYAKC  +  AE LF    D K+ VAW  MI GYS N   F++    R M+  G +  +
Sbjct: 270 DMYAKCGRMDYAERLFDQITD-KSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPD 328

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
             T  ++L  CA + A   G  VHG  + +GF  ++ +++AL+DMY +CG L  A  L  
Sbjct: 329 WITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFG 388

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
                N +SWN+MI  + + G +++A++LF+ +  + +K D  T  S+L  +A    L  
Sbjct: 389 QMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLRE 448

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
           A+ +H  + K   +   FV+N+++ MY K GNL  A  +F+ M  KDVISW ++I   A 
Sbjct: 449 AEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAI 508

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
           HG    +++ FS+MR  G  P+     S+L +C+
Sbjct: 509 HGFGRISIELFSEMREKGFEPNGSTFVSLLLSCS 542



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 134/301 (44%), Gaps = 37/301 (12%)

Query: 19  IIGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAY 77
           ++G + +   + N   P   L  ALVD +   G++  A  LF +M++R+  +WN MIA+Y
Sbjct: 346 LLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASY 405

Query: 78  ANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLD 137
             +G  R+A  LF +   K                                 +P   T+ 
Sbjct: 406 TKNGENRKAMTLFQDLCNKTL-------------------------------KPDATTIA 434

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           ++L   +    L+  EQ HGY  K   D N FV   +V MY KC  +  A  +F      
Sbjct: 435 SILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMT-F 493

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           K+ ++W T+I  Y+ +G+G  +IE F +MR +G E N  TF S+L +C+     + G + 
Sbjct: 494 KDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEY 553

Query: 258 HGCILSSGFEANVYVQ--SALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIVGFARQ 314
               +   +  N  ++    ++D+  + G+LD A+  +E   +      W S++     +
Sbjct: 554 FNS-MKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNK 612

Query: 315 G 315
           G
Sbjct: 613 G 613


>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 291/821 (35%), Positives = 437/821 (53%), Gaps = 118/821 (14%)

Query: 23  ARYTHNVGNSVKPA---SDL---NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAA 76
            R + +V N+ KP     D+   N+A+     +G  D A  +F  M  R   ++N MI+ 
Sbjct: 30  TRRSESVTNNNKPRVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISG 89

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
           Y  + +   A+ LF++ P ++ F+                     W + L GY       
Sbjct: 90  YLRNSKFNLARNLFDQMPERDLFS---------------------WNVMLTGY------- 121

Query: 137 DNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD 196
              +R C L                                        +A  LF + P+
Sbjct: 122 ---VRNCRLG---------------------------------------DARRLFDLMPE 139

Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
            K+ V+W ++++GY+QNGY  +A E F +M     E N  ++  +L A         G  
Sbjct: 140 -KDVVSWNSLLSGYAQNGYVDEAREVFDNM----PEKNSISWNGLLAAYV-----HNGRI 189

Query: 257 VHGCIL-SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
              C+L  S  + ++   + L+  + +   L  AR L +   + + +SWN+MI G+A+ G
Sbjct: 190 EEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGG 249

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK------------SVHSLI- 362
              +A  LF +   RD+    FT+ ++++ +  N  L+ AK            S +++I 
Sbjct: 250 GLSQARRLFDESPTRDV----FTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIA 305

Query: 363 --VKTG--------FEGYKFVN----NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
             V+T         FE     N    N +I  Y + G++  A   F++M  +D +SW ++
Sbjct: 306 GYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAI 365

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
           I G A  G YEEAL  F +++  G   +       LS CA++  LE G+Q+H   +K G 
Sbjct: 366 IAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGY 425

Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
            +   V N+L+ +Y KCG I++AN  F+ +  +DV++W  ++ G A++G G++AL  ++ 
Sbjct: 426 GTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFES 485

Query: 529 MLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSG 588
           M   G KPD IT VG+L ACSH GL +    YF SM K YG+ P   HY CMIDLLGR+G
Sbjct: 486 MKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAG 545

Query: 589 KLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSN 648
           +L EA+ L+  M  +P A  W ALL A R+HG+ ELGE+AA  +F++EP N+  YV LSN
Sbjct: 546 RLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSN 605

Query: 649 MYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDE 708
           +Y+ +G+W DA ++R  M+  G++K PG SWVE  +++H F   D  HP +  IY+ ++E
Sbjct: 606 LYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEE 665

Query: 709 IMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRV 768
           + L ++E GYV      LH+VEEE KE  L YHSEKLAVAFG+LT+P G PIR+ KNLRV
Sbjct: 666 LDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRV 725

Query: 769 CGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           C DCH+A+K+IS +  R IILRDS+RFHHF  G CSCGDYW
Sbjct: 726 CEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 128/272 (47%), Gaps = 67/272 (24%)

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
            L    + GL +    YF  M++ Y + P   HY CMIDLLGR  +L E           
Sbjct: 770 FLLVVIYTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEG---------- 819

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
                  ALL A R+HG+ ELGE+AA   F++ P N           S   K        
Sbjct: 820 -------ALLGASRIHGNTELGEKAAQMFFKMGPQN-----------SGISK-------- 853

Query: 664 KLMKSRGIRKEPGCSWVETNSQVH-----IFISEDRGHPLRTDIYSKIDEIMLLIKEAGY 718
             M+  G++K PG SW E  +++H     +F+S +R                   +  G+
Sbjct: 854 --MRDVGVQKVPGYSWFEVQNKIHTFSVGLFLSRER-------------------ENIGF 892

Query: 719 VPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKN-LRVCGDCHTAMK 777
           + +++  +   EEE +   L Y SE LA A G+LT+P G P R+ K  + VC DC +A+K
Sbjct: 893 LEELDLKMREREEEKERT-LKYLSENLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIK 951

Query: 778 YISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           ++S +  R I LRDS   H F    CSCG+YW
Sbjct: 952 HMSKIVGRLITLRDS---HRFNESICSCGEYW 980



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 150/357 (42%), Gaps = 66/357 (18%)

Query: 16  RSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIA 75
           R K +G AR+  +    V+ A   N  +  ++  G + +A +LF++   RD FTW  M++
Sbjct: 216 RKKKLGDARWLFD-KMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVS 274

Query: 76  AYANSGRLREAKKLFNETPFK-------------------------------NFFTWSSL 104
            Y  +G L EAK  F+E P K                               N  +W+++
Sbjct: 275 GYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTM 334

Query: 105 IYGYSNYGLDIEAFELF----------WQMQLEGYRPSQY-------------------- 134
           I GY   G   +A + F          W   + GY  S +                    
Sbjct: 335 ITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNR 394

Query: 135 -TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKM 193
            T    L  C+    L+ G+Q HG A+K  +    FV   L+ MY KC  I EA   F+ 
Sbjct: 395 ATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEG 454

Query: 194 FPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDF 253
             + K+ V+W TM+ GY+++G+G +A+  F  M+  GV+ ++ T   +L+AC+     D 
Sbjct: 455 IEE-KDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDR 513

Query: 254 GAQ-VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
           G +  +      G        + +ID+  + G L+ A+ L+          SW +++
Sbjct: 514 GTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALL 570


>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 257/623 (41%), Positives = 374/623 (60%), Gaps = 3/623 (0%)

Query: 190 LFKMFPDGK-NHVAWTTMITGYSQNGYGFKAIECFRDM--RVEGVESNQFTFPSILTACA 246
           LF++ P    +   +  ++  +   G+   A+  F +M        ++Q T    L +C+
Sbjct: 72  LFRLGPRPPLSTPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCS 131

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            + A D G  V    +  G  A+ +V S+LI MYA CGD+ +AR + + +E    V WN+
Sbjct: 132 RMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNA 191

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           ++  + + G   E + +FK M    +  D+ T  SV+       D    K V   + + G
Sbjct: 192 IVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEG 251

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
                 +  AL+DMYAK G +  A  +F+ MQ +DV++W+++I+G        EAL  FS
Sbjct: 252 LARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFS 311

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
           +M+++ + P+ V + S+LSACA L  LE G+ VH+   +     +  +  +LV  YAKCG
Sbjct: 312 EMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCG 371

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
           CI+DA   F+SM  ++  TWTALI G A NG+G+EAL+ +  M   G +P  +TF+G+L 
Sbjct: 372 CIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLM 431

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ACSH+ L E  R +F+SM + YGIKP  +HY CM+DLLGR+G + EA   +  M  EP+A
Sbjct: 432 ACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNA 491

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
            +W+ALLS+C VH ++ +GE A   +  L P ++  YV LSN+Y++AG+W+DAA VRK M
Sbjct: 492 VIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEM 551

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFAL 726
           K RGI K PGCS +E +  V  F +ED  HP   +IY K++E++  IK AGYVP+     
Sbjct: 552 KDRGIEKTPGCSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNTADVR 611

Query: 727 HNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRH 786
             VEE  KE+ +++HSEKLA+AFGL+ L  GA IR+ KNLRVC DCH+A K IS VY R 
Sbjct: 612 LEVEEREKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCADCHSATKLISKVYDRE 671

Query: 787 IILRDSNRFHHFKAGNCSCGDYW 809
           I++RD N FHHFK G CSC DYW
Sbjct: 672 IVVRDRNIFHHFKDGTCSCNDYW 694



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 150/513 (29%), Positives = 239/513 (46%), Gaps = 25/513 (4%)

Query: 21  GPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANS 80
            P R       S  P   L+ AL+    SGE+  + + F  + +          AA A+ 
Sbjct: 19  APPRAPLRADPSYLP--QLHAALI---KSGELTGSAKSFHSLLE----------AAAASP 63

Query: 81  GRLREAKKLFNETPFKNFFT--WSSLIYGYSNYGLDIEAFELFWQM--QLEGYRPSQYTL 136
             L  A  LF   P     T  ++ L+  + + G   +A  LF +M          Q+T 
Sbjct: 64  TLLPYAVSLFRLGPRPPLSTPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTA 123

Query: 137 DNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD 196
              L+ CS    L  G     YA+K     + FV++ L+ MYA C  +  A  +F    +
Sbjct: 124 ACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEE 183

Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
               V W  ++  Y +NG   + +E F+ M   GV  ++ T  S++TAC  +     G  
Sbjct: 184 -SGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKW 242

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           V G +   G   N  + +AL+DMYAKCG++  ARRL +  +  + V+W++MI G+ +   
Sbjct: 243 VAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQ 302

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
            +EAL LF +M    ++ +D T  SVL+  A    L   K VHS + +        +  A
Sbjct: 303 CREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTA 362

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           L+D YAK G +D A   F  M  K+  +WT+LI G A +G   EAL+ FS MR +GI P 
Sbjct: 363 LVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPT 422

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVF 495
            V    +L AC+   ++E G++      +  G    +     +V +  + G +++A +  
Sbjct: 423 DVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFI 482

Query: 496 DSMHTR-DVITWTALIMGCAQN---GKGKEALQ 524
            +M    + + W AL+  CA +   G G+EAL+
Sbjct: 483 RTMPIEPNAVIWRALLSSCAVHRNVGIGEEALK 515


>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Cucumis sativus]
          Length = 678

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 240/579 (41%), Positives = 368/579 (63%), Gaps = 1/579 (0%)

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           +E  +  +  +L  C  +     G  +H  I SS FE ++ + + +++MYAKCG L+ A+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
            L +     + VSW  +I G+++ G   EAL+LF KM     + ++FT  S+L    +  
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
             ++ + +H+  +K G++    V ++L+DMYA+  ++  A ++FN +  K+V+SW +LI 
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
           G A  G  E  ++ F  M   G  P H   SS+ +ACA    LE G+ VHA  +KSGG  
Sbjct: 281 GHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQP 340

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
              + N+L+ +YAK G I DA +VF  +  +D+++W ++I G AQ+G G EALQ ++QML
Sbjct: 341 IAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQML 400

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKL 590
               +P+ ITF+ +L ACSH+GL +  ++YFE M K + I+    H+  ++DLLGR+G+L
Sbjct: 401 KAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKK-HKIEAQVAHHVTVVDLLGRAGRL 459

Query: 591 IEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMY 650
            EA   +++M  +P A VW ALL +CR+H +++LG  AA  +FEL+P ++ P+V LSN+Y
Sbjct: 460 NEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIY 519

Query: 651 STAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIM 710
           ++AG+  DAA+VRK+MK  G++KEP CSWVE  ++VH+F++ D  HP+R +I    ++I 
Sbjct: 520 ASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKIS 579

Query: 711 LLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCG 770
             IKE GYVPD +  L  + ++ +E+ L YHSEKLA+AF +L  P G  IRI KN+R+CG
Sbjct: 580 GKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICG 639

Query: 771 DCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           DCH+A K+ S V  R II+RD+NRFHHF  G CSC DYW
Sbjct: 640 DCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 678



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 123/384 (32%), Positives = 208/384 (54%), Gaps = 2/384 (0%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P +     +L  C+    L++G   H +   + F+ +  ++  +++MYAKC  + EA+ L
Sbjct: 103 PERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDL 162

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P  K+ V+WT +I+GYSQ+G   +A+  F  M   G + N+FT  S+L A     +
Sbjct: 163 FDKMPT-KDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPS 221

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              G Q+H   L  G++ NV+V S+L+DMYA+   +  A+ +       N VSWN++I G
Sbjct: 222 DHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAG 281

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
            AR+G  +  + LF +M  +  +   FTY SV    AS+  L   K VH+ ++K+G +  
Sbjct: 282 HARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPI 341

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
            ++ N LIDMYAK G++  A  VF  +  +D++SW S+I+G A HG   EAL+ F  M  
Sbjct: 342 AYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLK 401

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
           + + P+ +   S+L+AC+   +L+ GQ    +  K    + ++   ++V +  + G +N+
Sbjct: 402 AKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNE 461

Query: 491 ANRVFDSMHTRDV-ITWTALIMGC 513
           AN+  + M  +     W AL+  C
Sbjct: 462 ANKFIEEMPIKPTAAVWGALLGSC 485



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 214/419 (51%), Gaps = 18/419 (4%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++  YA  G L EA+ LF++ P K+  +W+ LI GYS  G   EA  LF +M   G++
Sbjct: 144 NFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQ 203

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+++TL ++L+          G Q H +++K  +D+N  V + L+DMYA+   + EA+ +
Sbjct: 204 PNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVI 263

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F      KN V+W  +I G+++ G G   +  F  M  +G E   FT+ S+ TACA+  +
Sbjct: 264 FNSLA-AKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGS 322

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            + G  VH  ++ SG +   Y+ + LIDMYAK G +  A+++       + VSWNS+I G
Sbjct: 323 LEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISG 382

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           +A+ G   EAL LF++M    ++ ++ T+ SVL   + +  L+  +    L+ K   E  
Sbjct: 383 YAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQ 442

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYH-----GSYEEALKY 424
              +  ++D+  + G L+ A      M  K   + W +L+  C  H     G Y     +
Sbjct: 443 VAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIF 502

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG-----GCSSLSVDNSL 478
             D   SG    HV++S+I ++   L+      +V  +  +SG      CS + ++N +
Sbjct: 503 ELDPHDSG---PHVLLSNIYASAGRLSD---AAKVRKMMKESGVKKEPACSWVEIENEV 555


>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 928

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 264/732 (36%), Positives = 416/732 (56%), Gaps = 2/732 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N++I+   + G +  A  +F++   ++  +W+S+   Y+  G   E+F +F  M+     
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 241

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            +  T+  +L +       + G   HG  +K  FD    V   L+ MYA      EA  +
Sbjct: 242 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 301

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           FK  P  K+ ++W +++  +  +G    A+     M   G   N  TF S L AC     
Sbjct: 302 FKQMPT-KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 360

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            + G  +HG ++ SG   N  + +AL+ MY K G++  +RR+L      + V+WN++I G
Sbjct: 361 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 420

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEG 369
           +A      +AL+ F+ M    +  +  T  SVL+ C      L   K +H+ IV  GFE 
Sbjct: 421 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 480

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
            + V N+LI MYAK G+L  +  +FN + ++++I+W +++   A+HG  EE LK  S MR
Sbjct: 481 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 540

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
             G+  D    S  LSA A+L VLE GQQ+H + +K G      + N+   +Y+KCG I 
Sbjct: 541 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG 600

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
           +  ++      R + +W  LI    ++G  +E    + +ML  G KP ++TFV LL ACS
Sbjct: 601 EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS 660

Query: 550 HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
           H GL +    Y++ + + +G++P  +H  C+IDLLGRSG+L EA+  + +M  +P+  VW
Sbjct: 661 HGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVW 720

Query: 610 KALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
           ++LL++C++HG+L+ G +AA NL +LEP +   YV  SNM++T G+WED   VRK M  +
Sbjct: 721 RSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFK 780

Query: 670 GIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNV 729
            I+K+  CSWV+   +V  F   DR HP   +IY+K+++I  LIKE+GYV D + AL + 
Sbjct: 781 NIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDT 840

Query: 730 EEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIIL 789
           +EE KE  L  HSE+LA+A+ L++ P+G+ +RIFKNLR+C DCH+  K++S V  R I+L
Sbjct: 841 DEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVL 900

Query: 790 RDSNRFHHFKAG 801
           RD  RFHHF+ G
Sbjct: 901 RDQYRFHHFERG 912



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 150/532 (28%), Positives = 264/532 (49%), Gaps = 5/532 (0%)

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKG-LLQRG 152
           P +N  +W++++ G    GL +E  E F +M   G +PS + + +++  C   G + + G
Sbjct: 2   PVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREG 61

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
            Q HG+  K+    + +V T ++ +Y     +  +  +F+  PD +N V+WT+++ GYS 
Sbjct: 62  VQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPD-RNVVSWTSLMVGYSD 120

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYV 272
            G   + I+ ++ MR EGV  N+ +   ++++C  +     G Q+ G ++ SG E+ + V
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180

Query: 273 QSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI 332
           +++LI M    G++D A  + +     + +SWNS+   +A+ G  +E+  +F  M     
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240

Query: 333 KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM 392
           +++  T  ++L+           + +H L+VK GF+    V N L+ MYA  G    A +
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 300

Query: 393 VFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV 452
           VF  M  KD+ISW SL+      G   +AL     M  SG   ++V  +S L+AC     
Sbjct: 301 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 360

Query: 453 LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMG 512
            E G+ +H + + SG   +  + N+LV +Y K G ++++ RV   M  RDV+ W ALI G
Sbjct: 361 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 420

Query: 513 CAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG-LAENARWYFESMDKVYGIK 571
            A++    +AL  +  M   G   +YIT V +L AC   G L E  +     +    G +
Sbjct: 421 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA-GFE 479

Query: 572 PGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
                   +I +  + G L  ++ L + +    +   W A+L+A   HG  E
Sbjct: 480 SDEHVKNSLITMYAKCGDLSSSQDLFNGL-DNRNIITWNAMLAANAHHGHGE 530



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 155/566 (27%), Positives = 277/566 (48%), Gaps = 18/566 (3%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +    ++  Y   G +  ++K+F E P +N  +W+SL+ GYS+ G   E  +++  M+
Sbjct: 76  DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMR 135

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            EG   ++ ++  V+  C L      G Q  G  +K+  +    V   L+ M      + 
Sbjct: 136 GEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVD 195

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A Y+F    + ++ ++W ++   Y+QNG+  ++   F  MR    E N  T  ++L+  
Sbjct: 196 YANYIFDQMSE-RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVL 254

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
             V  + +G  +HG ++  GF++ V V + L+ MYA  G    A  + +     + +SWN
Sbjct: 255 GHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWN 314

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVK 364
           S++  F   G   +AL L   M +    ++  T+ S L  CF  +      + +H L+V 
Sbjct: 315 SLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF-FEKGRILHGLVVV 373

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
           +G    + + NAL+ MY K G +  +  V   M  +DV++W +LI G A     ++AL  
Sbjct: 374 SGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAA 433

Query: 425 FSDMRISGICPDHVVVSSILSAC-AELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
           F  MR+ G+  +++ V S+LSAC     +LE G+ +HA  + +G  S   V NSL+ +YA
Sbjct: 434 FQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYA 493

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG ++ +  +F+ +  R++ITW A++   A +G G+E L+   +M + G   D  +F  
Sbjct: 494 KCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSE 553

Query: 544 LLFACSHAGLAENARWYFESMDKVYG--IKPGPDH----YACMIDLLGRSGKLIEAKALL 597
            L A +   + E  +       +++G  +K G +H    +    D+  + G++ E   +L
Sbjct: 554 GLSAAAKLAVLEEGQ-------QLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKML 606

Query: 598 DQMVGEPDATVWKALLSACRVHGDLE 623
              V     + W  L+SA   HG  E
Sbjct: 607 PPSVNRSLPS-WNILISALGRHGYFE 631



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 118/249 (47%), Gaps = 7/249 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           + D    N++I  YA  G L  ++ LFN    +N  TW++++   +++G   E  +L  +
Sbjct: 479 ESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSK 538

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+  G    Q++    L   +   +L+ G+Q HG A+K  F+ ++F+     DMY+KC  
Sbjct: 539 MRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGE 598

Query: 184 IFEAEYLFKMFPDGKNHV--AWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
           I E   + KM P   N    +W  +I+   ++GY  +    F +M   G++    TF S+
Sbjct: 599 IGE---VVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSL 655

Query: 242 LTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID- 299
           LTAC+     D G   +  I    G E  +     +ID+  + G L  A   +    +  
Sbjct: 656 LTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKP 715

Query: 300 NEVSWNSMI 308
           N++ W S++
Sbjct: 716 NDLVWRSLL 724



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 118/230 (51%), Gaps = 7/230 (3%)

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL-TVLEF 455
           M  ++ +SW ++++G    G Y E +++F  M   GI P   V++S+++AC    ++   
Sbjct: 1   MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
           G QVH    KSG  S + V  +++ +Y   G ++ + +VF+ M  R+V++WT+L++G + 
Sbjct: 61  GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY--GIKPG 573
            G+ +E +  Y  M   G   +  +   ++ +C   GL ++     + + +V   G++  
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQVVKSGLESK 177

Query: 574 PDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
                 +I +LG  G +  A  + DQM  E D   W ++ +A   +G +E
Sbjct: 178 LAVENSLISMLGSMGNVDYANYIFDQM-SERDTISWNSIAAAYAQNGHIE 226


>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g15130
 gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 263/688 (38%), Positives = 404/688 (58%), Gaps = 10/688 (1%)

Query: 131 PSQ-YTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           P+Q   L ++LR+C+ KGL  +G Q H Y +K+   LN      L+DMY KC+    A  
Sbjct: 3   PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +F   P+ +N V+W+ +++G+  NG    ++  F +M  +G+  N+FTF + L AC  ++
Sbjct: 63  VFDSMPE-RNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
           A + G Q+HG  L  GFE  V V ++L+DMY+KCG ++ A ++       + +SWN+MI 
Sbjct: 122 ALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIA 181

Query: 310 GFARQGFHKEALSLFKKMHARDIK--IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           GF   G+  +AL  F  M   +IK   D+FT  S+L   +S   +   K +H  +V++GF
Sbjct: 182 GFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGF 241

Query: 368 E--GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
                  +  +L+D+Y K G L  A   F+ +++K +ISW+SLI G A  G + EA+  F
Sbjct: 242 HCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLF 301

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             ++      D   +SSI+   A+  +L  G+Q+ A+ +K       SV NS+V +Y KC
Sbjct: 302 KRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKC 361

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G +++A + F  M  +DVI+WT +I G  ++G GK++++ + +ML    +PD + ++ +L
Sbjct: 362 GLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVL 421

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
            ACSH+G+ +     F  + + +GIKP  +HYAC++DLLGR+G+L EAK L+D M  +P+
Sbjct: 422 SACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPN 481

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
             +W+ LLS CRVHGD+ELG+     L  ++  N   YV +SN+Y  AG W +    R+L
Sbjct: 482 VGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNAREL 541

Query: 666 MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEI-MLLIKEAGYVPDMNF 724
              +G++KE G SWVE   +VH F S +  HPL   I   + E    L +E GYV  +  
Sbjct: 542 GNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKH 601

Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLT--LPQ-GAPIRIFKNLRVCGDCHTAMKYISA 781
            LH++++E KE  L  HSEKLA+   L T  L Q G  IR+FKNLRVC DCH  +K +S 
Sbjct: 602 ELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSK 661

Query: 782 VYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +     ++RD+ RFH F+ G CSCGDYW
Sbjct: 662 ITKIAYVVRDAVRFHSFEDGCCSCGDYW 689



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 159/491 (32%), Positives = 266/491 (54%), Gaps = 18/491 (3%)

Query: 47  SNSGEIDEAGQ----LFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWS 102
           +  G  D+ GQ    L +  S  +  T N +I  Y        A K+F+  P +N  +WS
Sbjct: 17  TRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWS 76

Query: 103 SLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT 162
           +L+ G+   G    +  LF +M  +G  P+++T    L+ C L   L++G Q HG+ +K 
Sbjct: 77  ALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKI 136

Query: 163 CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIEC 222
            F++   V   LVDMY+KC  I EAE +F+   D ++ ++W  MI G+   GYG KA++ 
Sbjct: 137 GFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVD-RSLISWNAMIAGFVHAGYGSKALDT 195

Query: 223 FRDMRVEGVES--NQFTFPSILTACAAVSARDFGAQVHGCILSSGFE--ANVYVQSALID 278
           F  M+   ++   ++FT  S+L AC++      G Q+HG ++ SGF   ++  +  +L+D
Sbjct: 196 FGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVD 255

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
           +Y KCG L SAR+  +  +    +SW+S+I+G+A++G   EA+ LFK++   + +ID F 
Sbjct: 256 LYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFA 315

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVK--TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
             S++  FA    L   K + +L VK  +G E    V N+++DMY K G +D A   F  
Sbjct: 316 LSSIIGVFADFALLRQGKQMQALAVKLPSGLE--TSVLNSVVDMYLKCGLVDEAEKCFAE 373

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
           MQ KDVISWT +ITG   HG  +++++ F +M    I PD V   ++LSAC+   +++ G
Sbjct: 374 MQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEG 433

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVL-VYAKCGCINDANRVFDSMHTR-DVITWTALIMGCA 514
           +++ +  L++ G        + V+ +  + G + +A  + D+M  + +V  W  L+  C 
Sbjct: 434 EELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCR 493

Query: 515 QNGK---GKEA 522
            +G    GKE 
Sbjct: 494 VHGDIELGKEV 504



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 195/389 (50%), Gaps = 39/389 (10%)

Query: 38  DLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK 96
           ++  +LVD +S  G I+EA ++F ++ DR   +WN MIA + ++                
Sbjct: 143 EVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHA---------------- 186

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
                     GY +  LD   F +  +  ++  RP ++TL ++L+ CS  G++  G+Q H
Sbjct: 187 ----------GYGSKALD--TFGMMQEANIK-ERPDEFTLTSLLKACSSTGMIYAGKQIH 233

Query: 157 GYAIKTCFDL--NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
           G+ +++ F    +A +   LVD+Y KC  +F A   F    + K  ++W+++I GY+Q G
Sbjct: 234 GFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKE-KTMISWSSLILGYAQEG 292

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI--LSSGFEANVYV 272
              +A+  F+ ++    + + F   SI+   A  +    G Q+      L SG E +V  
Sbjct: 293 EFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL- 351

Query: 273 QSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI 332
            ++++DMY KCG +D A +     ++ + +SW  +I G+ + G  K+++ +F +M   +I
Sbjct: 352 -NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNI 410

Query: 333 KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT-GFEGYKFVNNALIDMYAKQGNLDCAF 391
           + D+  Y +VL+  + +  +   + + S +++T G +        ++D+  + G L  A 
Sbjct: 411 EPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAK 470

Query: 392 MVFNLMQDK-DVISWTSLITGCAYHGSYE 419
            + + M  K +V  W +L++ C  HG  E
Sbjct: 471 HLIDTMPIKPNVGIWQTLLSLCRVHGDIE 499


>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 288/821 (35%), Positives = 432/821 (52%), Gaps = 118/821 (14%)

Query: 23  ARYTHNVGNSVKPA---SDL---NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAA 76
            R + +V N+ KP     D+   N+A+     +G  D A  +F  M  R   ++N MI+ 
Sbjct: 30  TRRSESVTNNNKPRVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISG 89

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
           Y  + +   A+ LF++ P ++ F+                     W + L GY       
Sbjct: 90  YLRNSKFNLARNLFDQMPERDLFS---------------------WNVMLTGY------- 121

Query: 137 DNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD 196
              +R C L                                        +A  LF + P+
Sbjct: 122 ---VRNCRLG---------------------------------------DARRLFDLMPE 139

Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
            K+ V+W ++++GY+QNGY  +A E F +M     E N  ++  +L A         G  
Sbjct: 140 -KDVVSWNSLLSGYAQNGYVDEAREVFDNM----PEKNSISWNGLLAAYV-----HNGRI 189

Query: 257 VHGCIL-SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
              C+L  S  + ++   + L+  + +   L  AR L +   + + +SWN+MI G+A+ G
Sbjct: 190 EEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGG 249

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL-------------- 361
              +A  LF +   RD+    FT+ ++++ +  N  L+ AK+                  
Sbjct: 250 GLSQARRLFDESPTRDV----FTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIA 305

Query: 362 ---------IVKTGFEGYKFVN----NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
                    I +  FE     N    N +I  Y + G++  A   F++M  +D +SW ++
Sbjct: 306 GYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAI 365

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
           I G A  G YEEAL  F +++  G   +       LS CA++  LE G+Q+H   +K G 
Sbjct: 366 IAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGY 425

Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
            +   V N+L+ +Y KCG I++AN  F+ +  +DV++W  ++ G A++G G++AL  ++ 
Sbjct: 426 GTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFES 485

Query: 529 MLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSG 588
           M   G KPD IT VG+L ACSH GL +    YF SM K YG+ P   HY CMIDLLGR+G
Sbjct: 486 MKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAG 545

Query: 589 KLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSN 648
           +L EA+ L+  M  +P A  W ALL A R+HG+ ELGE+AA  +F++EP N+  YV LSN
Sbjct: 546 RLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSN 605

Query: 649 MYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDE 708
           +Y+ +G+W DA ++R  M+  G++K PG SWVE  +++H F   D  HP +  IY+ ++E
Sbjct: 606 LYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEE 665

Query: 709 IMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRV 768
           + L ++E GYV      LH+VEEE KE  L YHSEKLAVAFG+LT+P G PIR+ KNLRV
Sbjct: 666 LDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRV 725

Query: 769 CGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           C DCH+A+K+IS +  R IILRDS+RFHHF  G CSCGDYW
Sbjct: 726 CEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 145/341 (42%), Gaps = 65/341 (19%)

Query: 16  RSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIA 75
           R K +G AR+  +    V+ A   N  +  ++  G + +A +LF++   RD FTW  M++
Sbjct: 216 RKKKLGDARWLFD-KMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVS 274

Query: 76  AYANSGRLREAKKLFNETPFK-------------------------------NFFTWSSL 104
            Y  +G L EAK  F+E P K                               N  +W+++
Sbjct: 275 GYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTM 334

Query: 105 IYGYSNYGLDIEAFELF----------WQMQLEGYRPSQY-------------------- 134
           I GY   G   +A + F          W   + GY  S +                    
Sbjct: 335 ITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNR 394

Query: 135 -TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKM 193
            T    L  C+    L+ G+Q HG A+K  +    FV   L+ MY KC  I EA   F+ 
Sbjct: 395 ATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEG 454

Query: 194 FPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDF 253
             + K+ V+W TM+ GY+++G+G +A+  F  M+  GV+ ++ T   +L+AC+     D 
Sbjct: 455 IEE-KDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDR 513

Query: 254 GAQ-VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
           G +  +      G        + +ID+  + G L+ A+ L+
Sbjct: 514 GTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLI 554


>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
 gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 252/678 (37%), Positives = 399/678 (58%), Gaps = 5/678 (0%)

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAI---KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
           L+ +L++C+    L+ GE  H + I   ++    +A+ +  L+++Y KC+    A  LF 
Sbjct: 34  LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACAAVSAR 251
           + P+ +N V+W  M+ GY  +G+ F+ ++ F+ M   G    N+F    +  +C+     
Sbjct: 94  LMPE-RNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRI 152

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
           + G Q HGC L  G  ++ +V++ L+ MY+ C     A R+L+     +   ++S + G+
Sbjct: 153 EEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGY 212

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
              G  KE L + +K    D   ++ TY S L  F++  DLN A  VHS +V+ GF    
Sbjct: 213 LECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEV 272

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
               ALI+MY K G +  A  VF+    +++   T+++       S+EEAL  FS M   
Sbjct: 273 EACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTK 332

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
            + P+    + +L++ AEL++L+ G  +H + LKSG  + + V N+LV +YAK G I DA
Sbjct: 333 EVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDA 392

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
            + F  M  RD++TW  +I GC+ +G G+EAL+ +D+M+  G  P+ ITF+G+L ACSH 
Sbjct: 393 RKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHI 452

Query: 552 GLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKA 611
           G  E    YF  + K + ++P   HY C++ LL ++G   +A+  +     E D   W+ 
Sbjct: 453 GFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRT 512

Query: 612 LLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
           LL+AC V  +  LG++ A    E  P ++  YV LSN+++ + +WE  A+VR LM +RG+
Sbjct: 513 LLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGV 572

Query: 672 RKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEE 731
           +KEPG SW+   +Q H+F++ED  HP  T IY+K+ E+M  IK  GY PD+  A H+V+E
Sbjct: 573 KKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDE 632

Query: 732 EGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRD 791
           E +E  L+YHSEKLAVA+GL+  P+ +P+ + KN+R+C DCH+A+K IS +  R+I++RD
Sbjct: 633 EQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRD 692

Query: 792 SNRFHHFKAGNCSCGDYW 809
           SNRFHHF  G CSC DYW
Sbjct: 693 SNRFHHFLDGQCSCCDYW 710



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 143/492 (29%), Positives = 239/492 (48%), Gaps = 17/492 (3%)

Query: 35  PASDLNRALVDFSNS-----GEIDEAGQLFEKMSDR--DGFTWNTMIAAYANSGRLREAK 87
           P   LN  L   +NS     GE   A  +    S R  D +  N++I  Y        A+
Sbjct: 30  PIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRAR 89

Query: 88  KLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVLRLCSLK 146
           KLF+  P +N  +W +++ GY N G D E  +LF  M   G  RP+++    V + CS  
Sbjct: 90  KLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNS 149

Query: 147 GLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTM 206
           G ++ G+QFHG  +K     + FV   LV MY+ C    EA  +    P     V +++ 
Sbjct: 150 GRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSV-FSSA 208

Query: 207 ITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF 266
           ++GY + G   + ++  R    E    N  T+ S L   + +   +   QVH  ++  GF
Sbjct: 209 LSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGF 268

Query: 267 EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK 326
            A V    ALI+MY KCG +  A+R+ + +   N     +++  + +    +EAL+LF K
Sbjct: 269 NAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSK 328

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
           M  +++  +++T+  +LN  A    L     +H L++K+G+  +  V NAL++MYAK G+
Sbjct: 329 MDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGS 388

Query: 387 LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSA 446
           ++ A   F+ M  +D+++W ++I+GC++HG   EAL+ F  M  +G  P+ +    +L A
Sbjct: 389 IEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQA 448

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDSMHTR---- 501
           C+ +  +E G       +K       +     +V + +K G   DA    D M T     
Sbjct: 449 CSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAE---DFMRTAPIEW 505

Query: 502 DVITWTALIMGC 513
           DV+ W  L+  C
Sbjct: 506 DVVAWRTLLNAC 517



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 78/148 (52%), Gaps = 4/148 (2%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++  YA SG + +A+K F+   F++  TW+++I G S++GL  EA E F +M   G  
Sbjct: 377 NALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEI 436

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAE 188
           P++ T   VL+ CS  G +++G  +    +K  FD+   +   T +V + +K     +AE
Sbjct: 437 PNRITFIGVLQACSHIGFVEQGLHYFNQLMKK-FDVQPDIQHYTCIVGLLSKAGMFKDAE 495

Query: 189 YLFKMFPDGKNHVAWTTMITG-YSQNGY 215
              +  P   + VAW T++   Y +  Y
Sbjct: 496 DFMRTAPIEWDVVAWRTLLNACYVRRNY 523


>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 277/720 (38%), Positives = 411/720 (57%), Gaps = 54/720 (7%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY- 189
           PS   L N   L SL+ +       H   IKT      + ++ L++      CI    + 
Sbjct: 4   PSLSLLHNCKTLQSLRII-------HAQMIKTGLHNTNYALSRLLEF-----CILSPNFD 51

Query: 190 -------LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
                  +F+   +  N + W TM  G++ +     AI+ +  M   G+  N +TFP +L
Sbjct: 52  GLPYAISVFETIQE-PNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLL 110

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD----------------- 285
            +CA +     G Q+HG +L  G+E ++YV ++LI MY K G                  
Sbjct: 111 KSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVV 170

Query: 286 --------------LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD 331
                         ++SA+++ +   + + VSWN++I G+A  G +KEAL LFK+M   +
Sbjct: 171 SYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTN 230

Query: 332 IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
           +K D+ T  +V++  A +  +   + VHS I   G      + NALID+Y+K G ++ A 
Sbjct: 231 VKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETAC 290

Query: 392 MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELT 451
            +F  + +KDVISW ++I G  +   Y+EAL  F +M  SG  P+ V + SIL ACA+L 
Sbjct: 291 GLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLG 350

Query: 452 VLEFGQQVHAVFLK--SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTAL 509
            ++FG+ +H    K   G  ++ S+  SL+ +YAKCG I  A++VF+SMH R +    A+
Sbjct: 351 AIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAM 410

Query: 510 IMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG 569
           I G A +G+   A   + +M   G +PD ITFVGLL ACSH+G+ +  R  F SM + Y 
Sbjct: 411 IFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYK 470

Query: 570 IKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAA 629
           I P  +HY CMIDLLG  G   EA+ +++ M  EPD  +W +LL AC++HG++ELGE  A
Sbjct: 471 ITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFA 530

Query: 630 NNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIF 689
             L ++EP N   YV LSN+Y+TAG+W + A +R L+  +G++K PGCS +E +S VH F
Sbjct: 531 QKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEF 590

Query: 690 ISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAF 749
           I  D+ HP   +IY  ++E+ +L++EAG+VPD +  L  +EEE K+  L +HSEKLA+AF
Sbjct: 591 IIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEFKQGALRHHSEKLAIAF 650

Query: 750 GLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           GL++   G  + I KNLRVC +CH A K IS +Y R II RD  RFHHF+ G CSC DYW
Sbjct: 651 GLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 234/482 (48%), Gaps = 34/482 (7%)

Query: 83  LREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRL 142
           L  A  +F      N   W+++  G++     + A +L+  M   G  P+ YT   +L+ 
Sbjct: 53  LPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKS 112

Query: 143 CSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF----------- 191
           C+   + + G+Q HG+ +K  ++L+ +V T L+ MY K     +A  +F           
Sbjct: 113 CAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSY 172

Query: 192 -----------------KMFPD--GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
                            KMF +   K+ V+W  +I+GY+  G   +A++ F++M    V+
Sbjct: 173 TALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVK 232

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
            ++ T  ++++ACA   +   G QVH  I   G  +N+ + +ALID+Y+KCG++++A  L
Sbjct: 233 PDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGL 292

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
            +     + +SWN+MI G+     +KEAL LF++M       +D T  S+L   A    +
Sbjct: 293 FQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAI 352

Query: 353 NNAKSVHSLIVK--TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           +  + +H  I K   G      +  +LIDMYAK G+++ A  VFN M  + + +  ++I 
Sbjct: 353 DFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIF 412

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
           G A HG    A   FS MR +GI PD +    +LSAC+   +L+ G+++     ++   +
Sbjct: 413 GFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKIT 472

Query: 471 -SLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQ 528
             L     ++ +    G   +A  + ++M    D + W +L+  C  +G  +    F  +
Sbjct: 473 PKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQK 532

Query: 529 ML 530
           ++
Sbjct: 533 LI 534



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 220/446 (49%), Gaps = 23/446 (5%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +  +G   +A ++F+  S RD  ++  +I  YA+ G +  A+K+F+E P K+  +W+++I
Sbjct: 148 YVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAII 207

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            GY++ G + EA +LF +M     +P + T+  V+  C+  G +Q G Q H +       
Sbjct: 208 SGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLG 267

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            N  +V  L+D+Y+KC  +  A  LF+   + K+ ++W TMI GY+      +A+  F++
Sbjct: 268 SNLKIVNALIDLYSKCGEVETACGLFQGLSN-KDVISWNTMIGGYTHLNLYKEALLLFQE 326

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS--SGFEANVYVQSALIDMYAKC 283
           M   G   N  T  SIL ACA + A DFG  +H  I     G      ++++LIDMYAKC
Sbjct: 327 MLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKC 386

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
           GD+++A ++          + N+MI GFA  G    A  +F +M    I+ DD T+  +L
Sbjct: 387 GDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLL 446

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN-----ALIDMYAKQGNLDCAFMVFNLM- 397
           +  + +  L+  +     I ++  + YK          +ID+    G    A  + N M 
Sbjct: 447 SACSHSGMLDLGRR----IFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMT 502

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDM-RISGICP-DHVVVSSILSACAELTVLEF 455
            + D + W SL+  C  HG+ E    +   + +I    P  +V++S+I +       +  
Sbjct: 503 MEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEV-- 560

Query: 456 GQQVHAVFLKSG-----GCSSLSVDN 476
              + A+    G     GCSS+ +D+
Sbjct: 561 -ANIRALLNDKGMKKVPGCSSIEIDS 585


>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
 gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
 gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 776

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 269/758 (35%), Positives = 429/758 (56%), Gaps = 32/758 (4%)

Query: 68  FTWNTMIAAYAN--SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           F  N ++A+Y     G    A +L +E P +N  +++ +I  YS  GL   +   F + +
Sbjct: 35  FLRNCLLASYCRLGVGAPLHAARLLDEMPRRNAVSYNLVIVAYSRAGLPALSLATFARAR 94

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
                  ++T    L  CS    ++ G+  H   +        F+   +  MYA+C  + 
Sbjct: 95  AWARVVDRFTYAAALAACSRALDVRTGKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMG 154

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           EA  +F    + ++ V+W  +++GY + G   + +E F  M   G+  N F   SI+  C
Sbjct: 155 EARRVFDAAEE-RDDVSWNALLSGYVRAGAREETLEVFSLMCRHGLGWNSFALGSIIKCC 213

Query: 246 AA---------VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           A+         V        VHGC++ +G +A++++ SA+IDMYAK G L +A  L +  
Sbjct: 214 ASSSSYAAAGDVGGGRIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSV 273

Query: 297 EIDNEVSWNSMIVGFARQ---GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
              N +  N+MI GF R+      +EAL L+ ++ +R ++  +F++ S+L       +  
Sbjct: 274 PDPNVIVLNAMIAGFCREEAADVAREALGLYSELQSRGMQPSEFSFSSILRACNLAGEFG 333

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
             K +H  ++K  F+G  ++ +ALID+Y+  G ++  +  F  +  +DV+ WTS+I+GC 
Sbjct: 334 FGKQIHGQVLKHSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCV 393

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
            +  +EEAL+ F +    G+ PD   +SS+++ACA L V   G+Q+  + +KSG     +
Sbjct: 394 QNELFEEALRLFQESVRCGLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTA 453

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML-AR 532
           + NS + + A+ G ++ A R F  M +RDV++W+A+I   A +G  ++AL  +++ML A+
Sbjct: 454 MGNSFIHMCARSGDVDAATRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAK 513

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIE 592
              P+ ITF+ +L ACSH GL +    Y+  M+  YG+ P   H  C++DLLGR+G+L +
Sbjct: 514 VAPPNEITFLSILTACSHGGLVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLAD 573

Query: 593 AKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYST 652
           A+A +       DA VW++LL++CR+HGD+E G+  A+ + +LEP ++  YV L NMY  
Sbjct: 574 AEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADKIMDLEPTSSASYVILYNMYLD 633

Query: 653 AGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLL 712
           AG+   A++ R LMK RG++KEPG SW+E +S VH F++ D+ HP    IY K+ E  ++
Sbjct: 634 AGELSSASKTRDLMKERGVKKEPGLSWIELSSGVHSFVAGDKSHPESKAIYRKVAE--MV 691

Query: 713 IKEAGYVPDMNFALHNVEEEGKEIGLA-YHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGD 771
            K AG                +E  LA  HSEKLAVAFG++ LPQ APIR+ KNLRVC D
Sbjct: 692 SKVAGI-------------SSREQDLAGCHSEKLAVAFGMIHLPQSAPIRVMKNLRVCRD 738

Query: 772 CHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           CH+ M+ IS    R IILRD+ RFH F+ G+CSCG YW
Sbjct: 739 CHSTMELISKSERREIILRDAIRFHRFRDGSCSCGGYW 776



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 186/390 (47%), Gaps = 31/390 (7%)

Query: 50  GEIDEA--GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYG 107
           G I EA  G + +   D D F  + MI  YA  G L  A  LF   P  N    +++I G
Sbjct: 228 GRIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAG 287

Query: 108 Y-SNYGLDI--EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCF 164
           +      D+  EA  L+ ++Q  G +PS+++  ++LR C+L G    G+Q HG  +K  F
Sbjct: 288 FCREEAADVAREALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSF 347

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
             + ++ + L+D+Y+   C+ +    F+  P  ++ V WT++I+G  QN    +A+  F+
Sbjct: 348 QGDVYIGSALIDLYSGSGCMEDGYRCFRSLPK-QDVVIWTSVISGCVQNELFEEALRLFQ 406

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
           +    G+  + F   S++ ACA+++    G Q+    + SGF     + ++ I M A+ G
Sbjct: 407 ESVRCGLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSG 466

Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM-HARDIKIDDFTYPSVL 343
           D+D+A R  +  E  + VSW+++I   A  G  ++AL +F +M  A+    ++ T+ S+L
Sbjct: 467 DVDAATRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSIL 526

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN------------ALIDMYAKQGNL-DCA 390
              +           H  +V  G   Y  +N+             ++D+  + G L D  
Sbjct: 527 TACS-----------HGGLVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAE 575

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
             + +     D + W SL+  C  HG  E 
Sbjct: 576 AFIRDSAFHDDAVVWRSLLASCRIHGDMER 605



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 82/364 (22%), Positives = 150/364 (41%), Gaps = 45/364 (12%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           GQ+ +     D +  + +I  Y+ SG + +  + F   P ++   W+S+I G     L  
Sbjct: 340 GQVLKHSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFE 399

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  LF +    G RP  + + +V+  C+   + + GEQ    A+K+ F+    +    +
Sbjct: 400 EALRLFQESVRCGLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSFI 459

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV-ESN 234
            M A+   +  A   F+   + ++ V+W+ +I+ ++ +G    A+  F +M    V   N
Sbjct: 460 HMCARSGDVDAATRRFQEM-ESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPN 518

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLL 293
           + TF SILTAC+     D G + +G +    G    +   + ++D+  + G L  A   +
Sbjct: 519 EITFLSILTACSHGGLVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFI 578

Query: 294 EYSEI-DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
             S   D+ V W S++      G  +    +  K+                      +DL
Sbjct: 579 RDSAFHDDAVVWRSLLASCRIHGDMERGQLVADKI----------------------MDL 616

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV-----ISWTS 407
               S   +I              L +MY   G L  A    +LM+++ V     +SW  
Sbjct: 617 EPTSSASYVI--------------LYNMYLDAGELSSASKTRDLMKERGVKKEPGLSWIE 662

Query: 408 LITG 411
           L +G
Sbjct: 663 LSSG 666



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 6/115 (5%)

Query: 47  SNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE-----TPFKNFFTW 101
           + SG++D A + F++M  RD  +W+ +I+++A+ G  R+A  +FNE         N  T+
Sbjct: 463 ARSGDVDAATRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITF 522

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
            S++   S+ GL  E    +  M  E G  P+      V+ L    G L   E F
Sbjct: 523 LSILTACSHGGLVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAF 577


>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 290/789 (36%), Positives = 438/789 (55%), Gaps = 57/789 (7%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  NT+I  Y   G L  A+KLF+E   +N  TW+ LI GY+  G   EA   F  M   
Sbjct: 135 FLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRA 194

Query: 128 GYRPSQYTLDNVLRLCSLKGL--LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC-KCI 184
           G+ P+ Y   + LR C   G    + G Q HG   KT +  +  V   L+ MY  C    
Sbjct: 195 GFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSA 254

Query: 185 FEAEYLFKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV-----ESNQF 236
            +A  +F    DG   +N ++W ++I+ YS+ G    A + F  M+ EG+      ++ F
Sbjct: 255 NDARSVF----DGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAF 310

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEAN-VYVQSALIDMYAKCGDLDSARRLLEY 295
           +  S+L        R  G +VH  ++ +G   N V + + L++MYAK G +  A  + E 
Sbjct: 311 SEFSVLE-----EGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFEL 365

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD---------------------IK- 333
               + VSWNS+I G  +    ++A  +F  M   D                     +K 
Sbjct: 366 MVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKY 425

Query: 334 ----------IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK 383
                     +   T+ ++L+  +S      +  +H+L++K        + NAL+  Y K
Sbjct: 426 FLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGK 485

Query: 384 QGNL-DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
            G + +C  +   + + +D +SW S+I+G  ++    +A+     M   G   D    ++
Sbjct: 486 CGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFAT 545

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
           ILSACA +  LE G +VHA  +++   S + V ++LV +Y+KCG I+ A+R F+ M  R+
Sbjct: 546 ILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRN 605

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
           V +W ++I G A++G G++AL+ + +M+  G  PD++TFVG+L ACSH G  E    +F+
Sbjct: 606 VYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFK 665

Query: 563 SMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA-CRVHG- 620
           SM +VY + P  +H++CM+DLLGR+GKL E    ++ M  +P+  +W+ +L A CR +G 
Sbjct: 666 SMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGR 725

Query: 621 DLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWV 680
           + ELG RAA  L ELEP NA+ YV L+NMY++  KWED A+ R  MK   ++KE GCSWV
Sbjct: 726 NTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWV 785

Query: 681 ETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAY 740
                VH+F++ D+ HP +  IY K+ E+   +++AGY+P   +AL ++E E KE  L+Y
Sbjct: 786 TMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSY 845

Query: 741 HSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKA 800
           HSEK+AVAF +LT     PIRI KNLRVCGDCH+A  YIS +  R I+LRDSNRFHHF+ 
Sbjct: 846 HSEKIAVAF-VLTRQSALPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFED 904

Query: 801 GNCSCGDYW 809
           G CSCGDYW
Sbjct: 905 GKCSCGDYW 913



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 194/381 (50%), Gaps = 25/381 (6%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++ SG I +A  +FE M ++D  +WN++I+    +    +A ++F+  P  +  +W+S+I
Sbjct: 350 YAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVI 409

Query: 106 YGYSNYGLDI-EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCF 164
              S+    + +A + F QM   G+  S+ T  N+L   S   L +   Q H   +K C 
Sbjct: 410 GALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCL 469

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
             +  +   L+  Y KC  + E E +F    + ++ V+W +MI+GY  N    KA++   
Sbjct: 470 SDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVW 529

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
            M  +G   + FTF +IL+ACA+V+  + G +VH C + +  E++V V SAL+DMY+KCG
Sbjct: 530 FMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCG 589

Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
            +D A R  E   + N  SWNSMI G+AR G  ++AL LF +M       D  T+  VL+
Sbjct: 590 RIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLS 649

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVN------------NALIDMYAKQGNLDCAFM 392
             +           H   V+ GFE +K ++            + ++D+  + G LD    
Sbjct: 650 ACS-----------HVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGD 698

Query: 393 VFNLMQDK-DVISWTSLITGC 412
             N M  K +V+ W +++  C
Sbjct: 699 FINSMPMKPNVLIWRTVLGAC 719



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 194/438 (44%), Gaps = 62/438 (14%)

Query: 233 SNQFTFPSILT----ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
           S+  TF S++     +C +  AR+   Q     +  GF  N+++ + LI++Y + GDL S
Sbjct: 97  SSSETFESLINRYQGSCCSEEARELHLQS----IKYGFVGNLFLSNTLINIYVRIGDLGS 152

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFA 347
           A++L +     N V+W  +I G+ + G   EA + F+ M       + + + S L  C  
Sbjct: 153 AQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQE 212

Query: 348 SNID-LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK-QGNLDCAFMVFNLMQDKDVISW 405
           S          +H LI KT +     V N LI MY     + + A  VF+ +  ++ ISW
Sbjct: 213 SGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISW 272

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGIC----PDHVVVSSILSACAELTVLE----FGQ 457
            S+I+  +  G    A   FS M+  G+     P+         A +E +VLE     G+
Sbjct: 273 NSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPN--------DAFSEFSVLEEGRRKGR 324

Query: 458 QVHAVFLKSG-GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
           +VHA  +++G   + +++ N LV +YAK G I DA  VF+ M  +D ++W +LI G  QN
Sbjct: 325 EVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQN 384

Query: 517 --------------------------------GKGKEALQFYDQMLARGTKPDYITFVGL 544
                                               +A++++ QM+  G     +TF+ +
Sbjct: 385 ECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINI 444

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L A S   L E +      + K Y +         ++   G+ G++ E + +  +M    
Sbjct: 445 LSAVSSLSLHEVSHQIHALVLK-YCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETR 503

Query: 605 DATVWKALLSACRVHGDL 622
           D   W +++S   +H +L
Sbjct: 504 DEVSWNSMISG-YIHNEL 520


>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
          Length = 630

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 246/592 (41%), Positives = 365/592 (61%), Gaps = 5/592 (0%)

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           +A++    ++  G+ ++  T+  ++  C +  A   G  +   +  +G    +++ + LI
Sbjct: 44  RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
           +MY K   L+ A +L +     N +SW +MI  +++   H++AL L   M   +++ + +
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           TY SVL    S   +++ + +H  I+K G E   FV +ALID++AK G  + A  VF+ M
Sbjct: 164 TYSSVLR---SCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
              D I W S+I G A +   + AL+ F  M+ +G   +   ++S+L AC  L +LE G 
Sbjct: 221 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 280

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
           Q H   +K      L ++N+LV +Y KCG + DA RVF+ M  RDVITW+ +I G AQNG
Sbjct: 281 QAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG 338

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY 577
             +EAL+ +++M + GTKP+YIT VG+LFACSHAGL E+  +YF SM K+YGI P  +HY
Sbjct: 339 YSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY 398

Query: 578 ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEP 637
            CMIDLLG++GKL +A  LL++M  EPDA  W+ LL ACRV  ++ L E AA  +  L+P
Sbjct: 399 GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDP 458

Query: 638 MNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHP 697
            +A  Y  LSN+Y+ + KW+    +R  M+ RGI+KEPGCSW+E N Q+H FI  D  HP
Sbjct: 459 EDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHP 518

Query: 698 LRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQG 757
              ++  K+++++  +   GYVP+ NF L ++E E  E  L +HSEKLA+AFGL+TLP  
Sbjct: 519 QIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIE 578

Query: 758 APIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             IRI KNLR+CGDCH   K  S + +R I++R   R+HHF+ G CSCGDYW
Sbjct: 579 KVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRGPIRYHHFQDGKCSCGDYW 630



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 191/380 (50%), Gaps = 10/380 (2%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N +I  Y     L +A +LF++ P +N  +W+++I  YS   +  +A EL   M  +
Sbjct: 97  FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
             RP+ YT  +VLR C+    +      H   IK   + + FV + L+D++AK     +A
Sbjct: 157 NVRPNVYTYSSVLRSCN---GMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDA 213

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F     G + + W ++I G++QN     A+E F+ M+  G  + Q T  S+L AC  
Sbjct: 214 LSVFDEMVTG-DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG 272

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           ++  + G Q H  I+   ++ ++ + +AL+DMY KCG L+ A R+    +  + ++W++M
Sbjct: 273 LALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTM 330

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTG 366
           I G A+ G+ +EAL LF++M +   K +  T   VL  C  + +  +      S+    G
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 390

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALKYF 425
            +  +     +ID+  K G LD A  + N M+ + D ++W +L+  C    +    L  +
Sbjct: 391 IDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNM--VLAEY 448

Query: 426 SDMRISGICPDHVVVSSILS 445
           +  ++  + P+     ++LS
Sbjct: 449 AAKKVIALDPEDAGTYTLLS 468



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 150/307 (48%), Gaps = 6/307 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           + D F  + +I  +A  G   +A  +F+E    +   W+S+I G++       A ELF +
Sbjct: 191 ESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKR 250

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+  G+   Q TL +VLR C+   LL+ G Q H + +K  +D +  +   LVDMY KC  
Sbjct: 251 MKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGS 308

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A  +F    + ++ + W+TMI+G +QNGY  +A++ F  M+  G + N  T   +L 
Sbjct: 309 LEDALRVFNQMKE-RDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLF 367

Query: 244 ACAAVSARDFGAQVHGCILS-SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NE 301
           AC+     + G      +    G +        +ID+  K G LD A +LL   E + + 
Sbjct: 368 ACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDA 427

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           V+W +++     Q     A    KK+ A D + D  TY  + N +A++   ++ + + + 
Sbjct: 428 VTWRTLLGACRVQRNMVLAEYAAKKVIALDPE-DAGTYTLLSNIYANSQKWDSVEEIRTR 486

Query: 362 IVKTGFE 368
           +   G +
Sbjct: 487 MRDRGIK 493



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/300 (22%), Positives = 127/300 (42%), Gaps = 41/300 (13%)

Query: 407 SLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
           S  T   Y      A+K    ++  G+  D    S ++  C     +  G  +      +
Sbjct: 31  SEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFN 90

Query: 467 GGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFY 526
           G    + + N L+ +Y K   +NDA+++FD M  R+VI+WT +I   ++    ++AL+  
Sbjct: 91  GHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELL 150

Query: 527 DQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGR 586
             ML    +P+  T+  +L +C+  G+++    +   + +  G++      + +ID+  +
Sbjct: 151 VLMLRDNVRPNVYTYSSVLRSCN--GMSDVRMLHCGIIKE--GLESDVFVRSALIDVFAK 206

Query: 587 SGKLIEAKALLDQMVGEPDATVWKAL---------------------------------- 612
            G+  +A ++ D+MV   DA VW ++                                  
Sbjct: 207 LGEPEDALSVFDEMV-TGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTS 265

Query: 613 -LSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
            L AC     LELG +A  ++ + +  + +    L +MY   G  EDA RV   MK R +
Sbjct: 266 VLRACTGLALLELGMQAHVHIVKYD-QDLILNNALVDMYCKCGSLEDALRVFNQMKERDV 324



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 35/172 (20%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           LN ALVD +   G +++A ++F +M +RD  TW+TMI+  A +G  +EA KLF       
Sbjct: 295 LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFE------ 348

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                                    +M+  G +P+  T+  VL  CS  GLL+ G  ++ 
Sbjct: 349 -------------------------RMKSSGTKPNYITIVGVLFACSHAGLLEDG-WYYF 382

Query: 158 YAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
            ++K  + ++        ++D+  K   + +A  L        + V W T++
Sbjct: 383 RSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434


>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
 gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
 gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
          Length = 694

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 253/659 (38%), Positives = 387/659 (58%), Gaps = 4/659 (0%)

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
           +Q H   +      + F++T L+   +    I  A  +F   P  +    W  +I GYS+
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQI-FPWNAIIRGYSR 96

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYV 272
           N +   A+  + +M++  V  + FTFP +L AC+ +S    G  VH  +   GF+A+V+V
Sbjct: 97  NNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156

Query: 273 QSALIDMYAKCGDLDSARRLLEYSEIDNE--VSWNSMIVGFARQGFHKEALSLFKKMHAR 330
           Q+ LI +YAKC  L SAR + E   +     VSW +++  +A+ G   EAL +F +M   
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
           D+K D     SVLN F    DL   +S+H+ +VK G E    +  +L  MYAK G +  A
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
            ++F+ M+  ++I W ++I+G A +G   EA+  F +M    + PD + ++S +SACA++
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
             LE  + ++    +S     + + ++L+ ++AKCG +  A  VFD    RDV+ W+A+I
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396

Query: 511 MGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGI 570
           +G   +G+ +EA+  Y  M   G  P+ +TF+GLL AC+H+G+     W+F  M   + I
Sbjct: 397 VGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKI 455

Query: 571 KPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAAN 630
            P   HYAC+IDLLGR+G L +A  ++  M  +P  TVW ALLSAC+ H  +ELGE AA 
Sbjct: 456 NPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQ 515

Query: 631 NLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFI 690
            LF ++P N   YVQLSN+Y+ A  W+  A VR  MK +G+ K+ GCSWVE   ++  F 
Sbjct: 516 QLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFR 575

Query: 691 SEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFG 750
             D+ HP   +I  +++ I   +KE G+V + + +LH++ +E  E  L  HSE++A+A+G
Sbjct: 576 VGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYG 635

Query: 751 LLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           L++ PQG P+RI KNLR C +CH A K IS +  R I++RD+NRFHHFK G CSCGDYW
Sbjct: 636 LISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 230/452 (50%), Gaps = 2/452 (0%)

Query: 67  GFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL 126
           GF    +I A ++ G +  A+++F++ P    F W+++I GYS      +A  ++  MQL
Sbjct: 53  GFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQL 112

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
               P  +T  ++L+ CS    LQ G   H    +  FD + FV  GL+ +YAKC+ +  
Sbjct: 113 ARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGS 172

Query: 187 AEYLFKMFP-DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           A  +F+  P   +  V+WT +++ Y+QNG   +A+E F  MR   V+ +     S+L A 
Sbjct: 173 ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAF 232

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
             +     G  +H  ++  G E    +  +L  MYAKCG + +A+ L +  +  N + WN
Sbjct: 233 TCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWN 292

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +MI G+A+ G+ +EA+ +F +M  +D++ D  +  S ++  A    L  A+S++  + ++
Sbjct: 293 AMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS 352

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
            +    F+++ALIDM+AK G+++ A +VF+   D+DV+ W+++I G   HG   EA+  +
Sbjct: 353 DYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLY 412

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             M   G+ P+ V    +L AC    ++  G                     ++ +  + 
Sbjct: 413 RAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRA 472

Query: 486 GCINDANRVFDSMHTRDVIT-WTALIMGCAQN 516
           G ++ A  V   M  +  +T W AL+  C ++
Sbjct: 473 GHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 137/469 (29%), Positives = 221/469 (47%), Gaps = 51/469 (10%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF--KNFFTWSSLIYGYSNYGL 113
            Q+F    D D F  N +IA YA   RL  A+ +F   P   +   +W++++  Y+  G 
Sbjct: 143 AQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE 202

Query: 114 DIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG 173
            +EA E+F QM+    +P    L +VL   +    L++G   H   +K   ++   ++  
Sbjct: 203 PMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS 262

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
           L  MYAKC  +  A+ LF       N + W  MI+GY++NGY  +AI+ F +M  + V  
Sbjct: 263 LNTMYAKCGQVATAKILFDKM-KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
           +  +  S ++ACA V + +    ++  +  S +  +V++ SALIDM+AKCG ++ AR + 
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
           + +   + V W++MIVG+   G  +EA+SL++ M    +  +D T+  +L   A N    
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL--MACN---- 435

Query: 354 NAKSVHSLIVKTGFEGYKFVNN--------------ALIDMYAKQGNLDCAFMVFNLMQ- 398
                HS +V+   EG+ F N                +ID+  + G+LD A+ V   M  
Sbjct: 436 -----HSGMVR---EGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPV 487

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD---HVVVSSILSACAEL--TVL 453
              V  W +L++ C  H   E  L  ++  ++  I P    H V  S L A A L   V 
Sbjct: 488 QPGVTVWGALLSACKKHRHVE--LGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVA 545

Query: 454 EFGQQVHAVFL-KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR 501
           E   ++    L K  GCS + V   L           +A RV D  H R
Sbjct: 546 EVRVRMKEKGLNKDVGCSWVEVRGRL-----------EAFRVGDKSHPR 583



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 112/264 (42%), Gaps = 33/264 (12%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++  G++  A  LF+KM   +   WN MI+ YA +G  REA  +F+E   K+        
Sbjct: 267 YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDV------- 319

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                                   RP   ++ + +  C+  G L++    + Y  ++ + 
Sbjct: 320 ------------------------RPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR 355

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            + F+ + L+DM+AKC  +  A  +F    D ++ V W+ MI GY  +G   +AI  +R 
Sbjct: 356 DDVFISSALIDMFAKCGSVEGARLVFDRTLD-RDVVVWSAMIVGYGLHGRAREAISLYRA 414

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M   GV  N  TF  +L AC        G      +            + +ID+  + G 
Sbjct: 415 MERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGH 474

Query: 286 LDSARRLLEYSEIDNEVS-WNSMI 308
           LD A  +++   +   V+ W +++
Sbjct: 475 LDQAYEVIKCMPVQPGVTVWGALL 498



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/186 (19%), Positives = 80/186 (43%), Gaps = 5/186 (2%)

Query: 29  VGNSVKPAS-DLNRALVDFSNSGEIDEAGQLFEKMSDRD----GFTWNTMIAAYANSGRL 83
           +   V+P +  +  A+   +  G +++A  ++E +   D     F  + +I  +A  G +
Sbjct: 315 INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSV 374

Query: 84  REAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLC 143
             A+ +F+ T  ++   WS++I GY  +G   EA  L+  M+  G  P+  T   +L  C
Sbjct: 375 EGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMAC 434

Query: 144 SLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAW 203
           +  G+++ G  F         +        ++D+  +   + +A  + K  P       W
Sbjct: 435 NHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVW 494

Query: 204 TTMITG 209
             +++ 
Sbjct: 495 GALLSA 500


>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 923

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 264/741 (35%), Positives = 421/741 (56%), Gaps = 3/741 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N++I  + N  R+++A++LF+    ++  +W+++I  YS+  +  + F +   M+    +
Sbjct: 184 NSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVK 243

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P   TL +++ +C+   L+  G   H   + +    +  ++  LV+MY+    + EAE L
Sbjct: 244 PDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESL 303

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF-RDMRVEGVESNQFTFPSILTACAAVS 249
           F+     ++ ++W TMI+ Y Q+    +A+E   + ++ +    N  TF S L AC++  
Sbjct: 304 FRNMSR-RDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPE 362

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
           A   G  +H  IL    +  + + ++L+ MY+KC  ++   R+ E     + VS N +  
Sbjct: 363 ALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTG 422

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN-AKSVHSLIVKTGFE 368
           G+A       A+ +F  M    IK +  T  ++     S  DL++    +H+ + +TG  
Sbjct: 423 GYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLL 482

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
             +++ N+LI MYA  G+L+ +  +F+ + +K VISW ++I     HG  EEA+K F D 
Sbjct: 483 SDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDS 542

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
           + +G   D   ++  LS+ A L  LE G Q+H + +K+G      V N+ + +Y KCG +
Sbjct: 543 QHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKM 602

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
           +   +       R    W  LI G A+ G  KEA   +  M++ G KPDY+TFV LL AC
Sbjct: 603 DCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSAC 662

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           SHAGL +    Y+ SM   +G+ PG  H  C++DLLGR GK  EA+  +D+M   P+  +
Sbjct: 663 SHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLI 722

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           W++LLS+ R H +L++G +AA NL EL+P +   YV LSN+Y+T  +W D  ++R  MK+
Sbjct: 723 WRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKT 782

Query: 669 RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHN 728
             + K P CSW++  ++V  F   DR H     IY K+DEI+L ++E GYV D + ALH+
Sbjct: 783 IKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLREVGYVADTSSALHD 842

Query: 729 VEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHII 788
            +EE KE  L  HSEKLA+A+GLL +P+G+ IRIFKNLRVC DCH   K +S V+ R I+
Sbjct: 843 TDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRIFKNLRVCADCHLVFKLVSMVFHREIV 902

Query: 789 LRDSNRFHHFKAGNCSCGDYW 809
           LRD  RFH FK G+CSC D+W
Sbjct: 903 LRDPYRFHQFKHGSCSCSDFW 923



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 157/610 (25%), Positives = 277/610 (45%), Gaps = 41/610 (6%)

Query: 56  GQLFEKMSDRDGFTWNTMIAA-----YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSN 110
           G     ++ R G   N  I       Y + G +  A++LF E P +N  +W++++   S+
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSS 122

Query: 111 YGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV 170
            G   EA   + +M+ EG   +   L  V+ LC        G Q   + + +    +  V
Sbjct: 123 NGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSV 182

Query: 171 VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG 230
              L+ M+   + + +AE LF    + ++ ++W  MI+ YS      K      DMR   
Sbjct: 183 ANSLITMFGNLRRVQDAERLFDRMEE-RDRISWNAMISMYSHEEVYSKCFIVLSDMRHGE 241

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           V+ +  T  S+++ CA+      G+ +H   +SSG   +V + +AL++MY+  G LD A 
Sbjct: 242 VKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAE 301

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEAL-SLFKKMHARDIKIDDFTYPSVLNCFASN 349
            L       + +SWN+MI  + +     EAL +L + +   +   +  T+ S L   +S 
Sbjct: 302 SLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSP 361

Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
             L N +++H++I++   +    + N+L+ MY+K  +++    VF  M   DV+S   L 
Sbjct: 362 EALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLT 421

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLE-FGQQVHAVFLKSGG 468
            G A       A++ FS MR +GI P+++ + ++   C  L  L  +G  +HA   ++G 
Sbjct: 422 GGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGL 481

Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
            S   + NSL+ +YA CG +  +  +F  ++ + VI+W A+I    ++G+G+EA++ +  
Sbjct: 482 LSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMD 541

Query: 529 MLARGTKPDYITFVGLLFACSH-AGLAENARWYFES------------------------ 563
               G K D       L + ++ A L E  + +  S                        
Sbjct: 542 SQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGK 601

Query: 564 MDKVYGIKPGPDH-----YACMIDLLGRSGKLIEAKALLDQMVG---EPDATVWKALLSA 615
           MD +    P P H     +  +I    R G   EA+     MV    +PD   + ALLSA
Sbjct: 602 MDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSA 661

Query: 616 CRVHGDLELG 625
           C   G ++ G
Sbjct: 662 CSHAGLIDKG 671



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 223/463 (48%), Gaps = 5/463 (1%)

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQR-- 151
           P +   +W + + G +  GL+  AF L   M+      S + L +++  C  +G  +   
Sbjct: 2   PHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAA 61

Query: 152 -GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
            G   H    +     N ++ T L+ +Y     +  A+ LF   P  +N V+WT ++   
Sbjct: 62  CGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQ-RNVVSWTAIMVAL 120

Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV 270
           S NG   +A+  +R MR EGV  N     ++++ C A+     G QV   ++ SG   +V
Sbjct: 121 SSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHV 180

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
            V ++LI M+     +  A RL +  E  + +SWN+MI  ++ +  + +   +   M   
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHG 240

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
           ++K D  T  S+++  AS+  +     +HSL V +G      + NAL++MY+  G LD A
Sbjct: 241 EVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEA 300

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD-MRISGICPDHVVVSSILSACAE 449
             +F  M  +DVISW ++I+      S  EAL+     ++     P+ +  SS L AC+ 
Sbjct: 301 ESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSS 360

Query: 450 LTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTAL 509
              L  G+ +HA+ L+    + L + NSL+ +Y+KC  + D  RVF+SM   DV++   L
Sbjct: 361 PEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVL 420

Query: 510 IMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
             G A       A++ +  M   G KP+YIT + L   C   G
Sbjct: 421 TGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLG 463



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 225/500 (45%), Gaps = 45/500 (9%)

Query: 20  IGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYA 78
           +G   ++  V + +  +  L  ALV+ +S +G++DEA  LF  MS RD  +WNTMI++Y 
Sbjct: 264 LGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYV 323

Query: 79  NSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ-MQLEGYRPSQYTLD 137
            S                                  +EA E   Q +Q +   P+  T  
Sbjct: 324 QSNSC-------------------------------VEALETLGQLLQTDEGPPNSMTFS 352

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           + L  CS    L  G   H   ++        +   L+ MY+KC  + + E +F+  P  
Sbjct: 353 SALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMP-C 411

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS-ARDFGAQ 256
            + V+   +  GY+       A+  F  MR  G++ N  T  ++   C ++     +G  
Sbjct: 412 YDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMP 471

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE--VSWNSMIVGFARQ 314
           +H  +  +G  ++ Y+ ++LI MYA CGDL+S+  +  +S I+N+  +SWN++I    R 
Sbjct: 472 LHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGI--FSRINNKSVISWNAIIAANVRH 529

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
           G  +EA+ LF        K+D F     L+  A+   L     +H L VK G +    V 
Sbjct: 530 GRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVV 589

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           NA +DMY K G +DC          +    W +LI+G A +G ++EA   F  M   G  
Sbjct: 590 NATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQK 649

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV--YAKCGCINDAN 492
           PD+V   ++LSAC+   +++ G   +     + G S   + + + +V    + G   +A 
Sbjct: 650 PDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSP-GIKHCVCIVDLLGRLGKFAEAE 708

Query: 493 RVFDSMHT--RDVITWTALI 510
           +  D M     D+I W +L+
Sbjct: 709 KFIDEMPVLPNDLI-WRSLL 727



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 179/361 (49%), Gaps = 4/361 (1%)

Query: 202 AWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD---FGAQVH 258
           +W T ++G ++ G    A    R MR   V  + F   S++TAC     ++    GA +H
Sbjct: 8   SWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACGAAIH 67

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
                +G   NVY+ +AL+ +Y   G + +A+RL       N VSW +++V  +  G  +
Sbjct: 68  ALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCME 127

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           EAL  +++M    +  +     +V++   +  D      V + +V +G   +  V N+LI
Sbjct: 128 EALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLI 187

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
            M+     +  A  +F+ M+++D ISW ++I+  ++   Y +     SDMR   + PD  
Sbjct: 188 TMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVT 247

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
            + S++S CA   ++  G  +H++ + SG   S+ + N+LV +Y+  G +++A  +F +M
Sbjct: 248 TLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNM 307

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT-KPDYITFVGLLFACSHAGLAENA 557
             RDVI+W  +I    Q+    EAL+   Q+L      P+ +TF   L ACS      N 
Sbjct: 308 SRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNG 367

Query: 558 R 558
           R
Sbjct: 368 R 368



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 143/302 (47%), Gaps = 17/302 (5%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +  N++I  YA  G L  +  +F+    K+  +W+++I     +G   EA +LF   Q
Sbjct: 484 DEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQ 543

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G +  ++ L   L   +    L+ G Q HG ++K   D ++ VV   +DMY KC    
Sbjct: 544 HAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCG--- 600

Query: 186 EAEYLFKMFPDGKNHVA--WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + + + K  PD  +     W T+I+GY++ GY  +A + F+ M   G + +  TF ++L+
Sbjct: 601 KMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLS 660

Query: 244 ACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLL-EYSEIDNE 301
           AC+     D G   +  +  + G    +     ++D+  + G    A + + E   + N+
Sbjct: 661 ACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPND 720

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF---TYPSVLNCFASN---IDLNNA 355
           + W S++   +    HK  L + +K     +++D F    Y  + N +A+N   +D++  
Sbjct: 721 LIWRSLL---SSSRTHKN-LDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKL 776

Query: 356 KS 357
           +S
Sbjct: 777 RS 778



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 7/176 (3%)

Query: 39  LNRALVDFSNSGEIDEAGQL----FEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP 94
           L   L   +N   ++E  QL     +   D D    N  +  Y   G++    K   +  
Sbjct: 554 LAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPA 613

Query: 95  FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ 154
            +    W++LI GY+ YG   EA + F  M   G +P   T   +L  CS  GL+ +G  
Sbjct: 614 HRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMD 673

Query: 155 FHGYAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
           ++     T F ++  +     +VD+  +     EAE      P   N + W ++++
Sbjct: 674 YYNSMAPT-FGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLS 728


>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 695

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 276/673 (41%), Positives = 403/673 (59%), Gaps = 4/673 (0%)

Query: 140 LRLCSLKGLLQRGEQFHG-YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           L+ C   G L+ G   H    +      + F+   L+ MY+ C  +  A  LF   P   
Sbjct: 24  LQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAMPR-P 82

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           N V+WTT+++G +QN     A+  F  M   G+   QF   S   A AA++AR  GAQ+H
Sbjct: 83  NLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQLH 142

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
              +  GF+A ++V S L DMY+K G L  A R+ +     + V+W +MI G+A+ G  +
Sbjct: 143 CVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLE 202

Query: 319 EALSLFKKMHARD-IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
            A+  F+ M     +  D     SVL+      D   A+++HS ++K+GFE    V NAL
Sbjct: 203 AAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNAL 262

Query: 378 IDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
            DMYAK  ++D A  V  + Q   +V+S TSLI G       E+AL  F ++R  G+ P+
Sbjct: 263 TDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPN 322

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFD 496
               SS++  CA   +LE G Q+HA  +K+   S   V ++L+ +Y KCG I+ + ++F 
Sbjct: 323 EFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFK 382

Query: 497 SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAEN 556
            +     I W A I   AQ+G G+EA++ +D+M + G +P++ITFV LL ACSHAGL + 
Sbjct: 383 EIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDE 442

Query: 557 ARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSAC 616
              YF SM   +GI+P  +HY+C+ID+ GR+G+L EA+  + +M  +P+A  W +LL AC
Sbjct: 443 GLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGAC 502

Query: 617 RVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPG 676
           R+ G+ ELGE AA+N+ +LEP N   +V LS +Y++ G+WED   VRKLM+   I+K PG
Sbjct: 503 RMRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMRDNRIKKLPG 562

Query: 677 CSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEI 736
            SWV++N + H+F SED  HP +  IY K++E+   IKE GYVPD  F   N+E+  K+ 
Sbjct: 563 FSWVDSNKKTHVFGSEDWSHPQQEKIYEKLEELYERIKEEGYVPDTRFLPCNLEDTAKQR 622

Query: 737 GLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFH 796
            L YHSE++AVAF L+++P   PI + KNLR+C DCH+A+K+IS V  R II+RD++RFH
Sbjct: 623 ILRYHSERIAVAFALISMPATKPIIVKKNLRICADCHSALKFISKVENRDIIVRDNSRFH 682

Query: 797 HFKAGNCSCGDYW 809
           HF  G CSCGDYW
Sbjct: 683 HFVKGGCSCGDYW 695



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 139/474 (29%), Positives = 237/474 (50%), Gaps = 7/474 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N +I  Y++   +  A +LF+  P  N  +W++L+ G +   +  +A   F  M   
Sbjct: 54  FLANHLITMYSHCADVPSAVRLFDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRA 113

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G  P+Q+ L +  R  +       G Q H   ++  FD   FV + L DMY+K   + EA
Sbjct: 114 GLVPTQFALSSAARAAAALAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEA 173

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACA 246
             +F   P  K+ VAWT MI GY++NG    A+  FRDMR EG V ++Q    S+L+A  
Sbjct: 174 CRVFDQMPQ-KDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASG 232

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWN 305
            +        +H C++ SGFE  V V++AL DMYAK  D+D+A R+++  +   N VS  
Sbjct: 233 GLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSAT 292

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           S+I G+      ++AL +F ++  + ++ ++FT+ S++   A    L     +H+ ++KT
Sbjct: 293 SLIDGYIETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKT 352

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
                 FV++ L+DMY K G +  +  +F  ++    I+W + I   A HG   EA++ F
Sbjct: 353 SLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAF 412

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL-VYAK 484
             M  SGI P+H+   S+L+AC+   +++ G +         G        S ++ +Y +
Sbjct: 413 DRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGR 472

Query: 485 CGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
            G +++A +    M  + +   W +L+  C   G  +      D M+    +PD
Sbjct: 473 AGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGNKELGEIAADNMMK--LEPD 524



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 182/362 (50%), Gaps = 9/362 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D + F  + +   Y+ SG L EA ++F++ P K+   W+++I GY+  G    A   F  
Sbjct: 151 DAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEAAVIAFRD 210

Query: 124 MQLEGYRPS-QYTLDNVLRLCSLKGLLQRG---EQFHGYAIKTCFDLNAFVVTGLVDMYA 179
           M+ EG   + Q+ L +VL   S  G L+ G      H   +K+ F+    V   L DMYA
Sbjct: 211 MRREGLVGADQHVLCSVL---SASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYA 267

Query: 180 KCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFP 239
           K   +  A  + K+     N V+ T++I GY +     KA+  F ++R +GVE N+FTF 
Sbjct: 268 KAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNEFTFS 327

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
           S++  CA  +  + GAQ+H  ++ +   ++ +V S L+DMY KCG +  + +L +  E  
Sbjct: 328 SMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYH 387

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSV 358
            +++WN+ I   A+ G  +EA+  F +M +  I+ +  T+ S+L  C  + +     K  
Sbjct: 388 TDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKYF 447

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGS 417
           +S+    G E      + +IDMY + G LD A      M  K +   W SL+  C   G+
Sbjct: 448 YSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGN 507

Query: 418 YE 419
            E
Sbjct: 508 KE 509


>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
 gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
          Length = 534

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 238/539 (44%), Positives = 345/539 (64%), Gaps = 5/539 (0%)

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
           ++ + LI+MY K G L  A+ + +     N VSW +MI  ++    + +AL     M   
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
            ++ + FTY SVL        L N + +H  I+K G +   FV +ALID+Y++ G L+ A
Sbjct: 61  GVRPNMFTYSSVLRACDG---LFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENA 117

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
             VF+ M   D++ W+S+I G A +   +EAL+ F  M+ +G       ++S+L AC  L
Sbjct: 118 LRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGL 177

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
            +LE G+QVH   LK      L ++N+L+ +Y KCG + DAN VF  M  +DVI+W+ +I
Sbjct: 178 ALLELGRQVHVHVLKYD--QDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMI 235

Query: 511 MGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGI 570
            G AQNG  KEAL+ ++ M   G KP+Y+T VG+LFACSHAGL E   +YF SM +++GI
Sbjct: 236 AGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGI 295

Query: 571 KPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAAN 630
            PG +HY CMIDLLGR+G+L EA  L+++M  EPDA  W+ALL+ACRVH ++++   AA 
Sbjct: 296 DPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAK 355

Query: 631 NLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFI 690
            +  L+P +A  YV LSN+Y+   +W D A VR+ M +RGI+KEPGCSW+E + Q+H FI
Sbjct: 356 QILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFI 415

Query: 691 SEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFG 750
             DR HP   +I  ++++++  +   GYVPD NF L ++E E  +  L YHSEKLA+ FG
Sbjct: 416 LGDRSHPQIREINIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQDSLRYHSEKLAIVFG 475

Query: 751 LLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           L++LP+G  IRI KNLR+CGDCH   K ++ +  R I++RD  R+HHF+ G CSCGD+W
Sbjct: 476 LMSLPRGQTIRIRKNLRICGDCHLFTKLLAKMEQRIIVIRDPVRYHHFQDGLCSCGDFW 534



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/378 (34%), Positives = 205/378 (54%), Gaps = 9/378 (2%)

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
           F++  L++MY K   + +A+ +F   PD +N V+WTTMI+ YS      KA+E    M  
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPD-RNVVSWTTMISAYSAAKLNDKALEFLVLMLR 59

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
           EGV  N FT+ S+L AC  +       Q+H CI+  G +++V+V+SALID+Y++ G+L++
Sbjct: 60  EGVRPNMFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELEN 116

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
           A R+ +     + V W+S+I GFA+     EAL LFK+M          T  SVL     
Sbjct: 117 ALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTG 176

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
              L   + VH  ++K  ++    +NNAL+DMY K G+L+ A  VF  M +KDVISW+++
Sbjct: 177 LALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTM 234

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG-QQVHAVFLKSG 467
           I G A +G  +EALK F  M++ GI P++V +  +L AC+   ++E G    H++    G
Sbjct: 235 IAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFG 294

Query: 468 GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFY 526
                     ++ +  + G +++A  + + M    D +TW AL+  C  +     A+   
Sbjct: 295 IDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAA 354

Query: 527 DQMLARGTKPDYITFVGL 544
            Q+L R    D  T+V L
Sbjct: 355 KQIL-RLDPQDAGTYVLL 371



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 185/357 (51%), Gaps = 8/357 (2%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N +I  Y   G L +A+ +F++ P +N  +W+++I  YS   L+ +A E    M  E
Sbjct: 1   FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G RP+ +T  +VLR C   GL     Q H   IK   D + FV + L+D+Y++   +  A
Sbjct: 61  GVRPNMFTYSSVLRACD--GLFNL-RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENA 117

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F     G + V W+++I G++QN  G +A+  F+ M+  G  + Q T  S+L AC  
Sbjct: 118 LRVFDEMVTG-DLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTG 176

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           ++  + G QVH  +L   ++ ++ + +AL+DMY KCG L+ A  +       + +SW++M
Sbjct: 177 LALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTM 234

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTG 366
           I G A+ G+ KEAL LF+ M    IK +  T   VL  C  + +        HS+    G
Sbjct: 235 IAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFG 294

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEAL 422
            +  +     +ID+  + G L  A  + N M+ + D ++W +L+  C  H + + A+
Sbjct: 295 IDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAI 351



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 147/307 (47%), Gaps = 6/307 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D F  + +I  Y+  G L  A ++F+E    +   WSS+I G++      EA  LF +
Sbjct: 95  DSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKR 154

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+  G+   Q TL +VLR C+   LL+ G Q H + +K  +D +  +   L+DMY KC  
Sbjct: 155 MKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGS 212

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A  +F    + K+ ++W+TMI G +QNGY  +A++ F  M+V G++ N  T   +L 
Sbjct: 213 LEDANAVFVRMVE-KDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLF 271

Query: 244 ACAAVSARDFGA-QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NE 301
           AC+     + G    H      G +        +ID+  + G L  A  L+   E + + 
Sbjct: 272 ACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDA 331

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           V+W +++           A+   K++   D + D  TY  + N +A+    N+   V   
Sbjct: 332 VTWRALLNACRVHRNVDVAIHAAKQILRLDPQ-DAGTYVLLSNIYANTQRWNDVAEVRRT 390

Query: 362 IVKTGFE 368
           +   G +
Sbjct: 391 MTNRGIK 397



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 6/101 (5%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF-- 95
           LN AL+D +   G +++A  +F +M ++D  +W+TMIA  A +G  +EA KLF       
Sbjct: 199 LNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLG 258

Query: 96  --KNFFTWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQ 133
              N+ T   +++  S+ GL  E    F  M +L G  P +
Sbjct: 259 IKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGR 299


>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
 gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
          Length = 908

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 275/771 (35%), Positives = 435/771 (56%), Gaps = 33/771 (4%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  F   G ++EA  +F  M + D  +WN+MIAAY  +G  +E+ +          F
Sbjct: 170 NSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRC---------F 220

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           +W   ++   N                        TL  +L  C     L+ G   H   
Sbjct: 221 SWMFRVHKEIN----------------------STTLSTMLAGCGSVDNLKWGRGIHSLV 258

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           +K  ++ N      L+ MY+      +AE +F+   + K+ ++W +M+  Y+Q+G    A
Sbjct: 259 LKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVE-KDMISWNSMMACYAQDGNCLDA 317

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           ++    M      +N  TF S L AC+       G  +H  ++  G   NV V +AL+ +
Sbjct: 318 LKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIVGNALVTL 377

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           YAK G +  A+++ +     + V+WN++I G A      EAL  FK M    + I+  T 
Sbjct: 378 YAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPINYITI 437

Query: 340 PSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
            +VL  C A N  L +   +H+ I+ TGF+  ++V N+LI MYAK G+L+ +  +F+ + 
Sbjct: 438 SNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLT 497

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
            K+  +W +++   A+HG  EEALK+  +MR +G+  D    S  L+A A+L +LE GQQ
Sbjct: 498 SKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQ 557

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK 518
           +H + +K G  S+  V ++ + +Y KCG I+D  R+      R  ++W  L    +++G 
Sbjct: 558 LHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPINRSRLSWNILTSSFSRHGF 617

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA 578
            ++A + + +M+  G KPD++TFV LL ACSH G+ E    Y++SM K +GI     H  
Sbjct: 618 FEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIKEFGIPAKIGHCV 677

Query: 579 CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM 638
           C+IDLLGRSG+  EA+  + +M   P   VW++LL+AC+ HG+LELG +A  NL +L+P 
Sbjct: 678 CIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLLAACKTHGNLELGRKAVENLLKLDPS 737

Query: 639 NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPL 698
           +   YV  SN+ +T GKWED  ++R+ M    I+K+P CSWV+  +++ +F   D  HP 
Sbjct: 738 DDSAYVLYSNICATTGKWEDVEKIRRQMGLNKIKKKPACSWVKLKNKLSLFGMGDHSHPQ 797

Query: 699 RTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA 758
            ++IY+K++E+  +IKEAGY+PD+++AL + +EE KE  L  HSE+LA+A+GL++ P+G+
Sbjct: 798 ASEIYAKLEELKKMIKEAGYIPDISYALQDTDEEQKEHNLWNHSERLALAYGLISSPEGS 857

Query: 759 PIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            ++IFKNLRVCGDCH+  K+ S +  R I+LRD  RFH F  G CSC DYW
Sbjct: 858 TLKIFKNLRVCGDCHSVYKFASGILGRKIVLRDPYRFHQFSGGQCSCTDYW 908



 Score =  233 bits (593), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 174/618 (28%), Positives = 295/618 (47%), Gaps = 14/618 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F   +++  Y N G   +A K+F E  +KN  +W++L+  Y +YG       ++ +M+
Sbjct: 64  DVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYRRMR 123

Query: 126 LEGYRPSQYTLDNVLRLC-SLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
            EG   +  T+ +V+  C SL+  L  G Q  G+ IK   + N  V   L+ M+     +
Sbjct: 124 SEGMSCNDNTMSSVISTCVSLENELL-GYQVLGHVIKYGLETNVSVANSLISMFGYFGSV 182

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            EA Y+F    D  + ++W +MI  Y +NG   +++ CF  M     E N  T  ++L  
Sbjct: 183 EEACYVFSGM-DEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAG 241

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C +V    +G  +H  +L  G+ +NV   + LI MY+  G  + A  + +     + +SW
Sbjct: 242 CGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISW 301

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           NSM+  +A+ G   +AL L   M       +  T+ S L   +        K +H+L++ 
Sbjct: 302 NSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIH 361

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            G      V NAL+ +YAK G +  A  VF  M  +D ++W +LI G A     +EALK 
Sbjct: 362 VGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKA 421

Query: 425 FSDMRISGICPDHVVVSSILSAC-AELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
           F  MR  G+  +++ +S++L AC A   +LE G  +HA  + +G  S   V NSL+ +YA
Sbjct: 422 FKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYA 481

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG +N +N +FD + +++   W A++   A +G  +EAL+F  +M   G   D  +F  
Sbjct: 482 KCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSE 541

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
            L A +   + E  +     +    G    P   +  +D+ G+ G++ +   ++ + +  
Sbjct: 542 CLAAAAKLAILEEGQ-QLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPINR 600

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP----YVQLSNMYSTAGKWEDA 659
              + W  L S+   HG     E+A     E+  +   P    +V L +  S  G  E+ 
Sbjct: 601 SRLS-WNILTSSFSRHG---FFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEG 656

Query: 660 -ARVRKLMKSRGIRKEPG 676
            A    ++K  GI  + G
Sbjct: 657 LAYYDSMIKEFGIPAKIG 674



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 139/443 (31%), Positives = 227/443 (51%), Gaps = 2/443 (0%)

Query: 107 GYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL-KGLLQRGEQFHGYAIKTCFD 165
           G+   G   E+   F +M+  G +PS   + +++  C   + +L  G Q HG+ +K    
Sbjct: 3   GFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVGLL 62

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            + FV T LV +Y       +A  +F+     KN V+WT ++  Y   G     +  +R 
Sbjct: 63  SDVFVGTSLVHLYGNYGLAADAMKVFQEMIY-KNVVSWTALMVAYVDYGEPSMVMNIYRR 121

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           MR EG+  N  T  S+++ C ++     G QV G ++  G E NV V ++LI M+   G 
Sbjct: 122 MRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGS 181

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           ++ A  +    +  + +SWNSMI  + R G  KE+L  F  M     +I+  T  ++L  
Sbjct: 182 VEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAG 241

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
             S  +L   + +HSL++K G+      +N LI MY+  G  + A +VF  M +KD+ISW
Sbjct: 242 CGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISW 301

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
            S++   A  G+  +ALK  + M       ++V  +S L+AC++      G+ +HA+ + 
Sbjct: 302 NSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIH 361

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
            G   ++ V N+LV +YAK G + +A +VF +M  RD +TW ALI G A + +  EAL+ 
Sbjct: 362 VGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKA 421

Query: 526 YDQMLARGTKPDYITFVGLLFAC 548
           +  M   G   +YIT   +L AC
Sbjct: 422 FKLMREEGVPINYITISNVLGAC 444



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 221/446 (49%), Gaps = 9/446 (2%)

Query: 207 ITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDF-GAQVHGCILSSG 265
           ++G+ + G   +++  F +MR  GV+ +     S++TAC         G QVHG I+  G
Sbjct: 1   MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
             ++V+V ++L+ +Y   G    A ++ +     N VSW +++V +   G     +++++
Sbjct: 61  LLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYR 120

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           +M +  +  +D T  SV++   S  +      V   ++K G E    V N+LI M+   G
Sbjct: 121 RMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFG 180

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
           +++ A  VF+ M + D ISW S+I     +G  +E+L+ FS M       +   +S++L+
Sbjct: 181 SVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLA 240

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
            C  +  L++G+ +H++ LK G  S++   N+L+ +Y+  G   DA  VF  M  +D+I+
Sbjct: 241 GCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMIS 300

Query: 506 WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMD 565
           W +++   AQ+G   +AL+    M       +Y+TF   L ACS    A   +     + 
Sbjct: 301 WNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVI 360

Query: 566 KVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELG 625
            V G+         ++ L  +SG +IEAK +  Q + + D   W AL+     H D E  
Sbjct: 361 HV-GLHENVIVGNALVTLYAKSGLMIEAKKVF-QTMPKRDGVTWNALIGG---HADSEEP 415

Query: 626 ERAANNLFELEPMNAMP--YVQLSNM 649
           + A    F+L     +P  Y+ +SN+
Sbjct: 416 DEAL-KAFKLMREEGVPINYITISNV 440


>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
          Length = 1058

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 287/753 (38%), Positives = 435/753 (57%), Gaps = 12/753 (1%)

Query: 66   DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
            D +  + +++A+A  G   EAK +F     KN  T + LI G        EA ++F   +
Sbjct: 309  DLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTR 368

Query: 126  --LEGYRPSQYTLDNVLRLCSL-KGLLQRGEQFHGYAIKTCF-DLNAFVVTGLVDMYAKC 181
              ++    +   L + L   S+ +  L+ G   HG+ ++T   DL   V  GLV+MYAKC
Sbjct: 369  NTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKC 428

Query: 182  KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
              I  A  +F++  +  + ++W T+I+   QNG   +A+  +  MR   +  + F   S 
Sbjct: 429  GAIESASKIFQLM-EATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISS 487

Query: 242  LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
            L++CA +     G QVH   +  G + +  V + L+ MY +CG +    ++       +E
Sbjct: 488  LSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDE 547

Query: 302  VSWNSMI-VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
            VSWN+M+ V  + Q    E + +F  M    +  +  T+ ++L   +    L   K VH+
Sbjct: 548  VSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHA 607

Query: 361  LIVKTGFEGYKFVNNALIDMYAKQGNL-DCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
             ++K G      V+NALI  YAK G++  C  +  N+   +D ISW S+I+G  Y+G+ +
Sbjct: 608  AVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQ 667

Query: 420  EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
            EA+     M  SG   D    S IL+ACA +  LE G ++HA  ++S   S + V+++LV
Sbjct: 668  EAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALV 727

Query: 480  LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
             +Y+KCG ++ A+++F+SM  R+  +W ++I G A++G G++A++ +++ML     PD++
Sbjct: 728  DMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHV 787

Query: 540  TFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ 599
            TFV +L ACSHAGL E    YFE M   +GI P  +HY+C+IDLLGR+GK+ + K  + +
Sbjct: 788  TFVSVLSACSHAGLVERGLEYFEMMPD-HGILPQIEHYSCVIDLLGRAGKIDKIKEYIQR 846

Query: 600  MVGEPDATVWKALLSACRVHGD---LELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
            M  EP+A +W+ +L ACR   D   ++LG  A+  L E+EP N + YV  SN ++  G W
Sbjct: 847  MPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLASNFHAATGMW 906

Query: 657  EDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA 716
            ED A+ R  M+    +KE G SWV  N  VH FI+ DR HP   +IY K++ ++  I+ A
Sbjct: 907  EDTAKARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKEIYEKLNFLIQNIRNA 966

Query: 717  GYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAM 776
            GYVP   +AL+++EEE KE  L+YHSEKLA+AF +LT     PIRI KNLRVCGDCH A 
Sbjct: 967  GYVPLTEYALYDLEEENKEELLSYHSEKLAIAF-VLTRSSSGPIRIMKNLRVCGDCHIAF 1025

Query: 777  KYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            +YIS +  R IILRDS RFHHFK G CSCGDYW
Sbjct: 1026 RYISQMISRQIILRDSIRFHHFKDGKCSCGDYW 1058



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 179/587 (30%), Positives = 299/587 (50%), Gaps = 25/587 (4%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
           +L ++  + D F  N ++ +YA   RL  A ++F+E P +N  +W+ L+ GY  +G+  E
Sbjct: 86  ELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEE 145

Query: 117 AFELFWQMQLE---GYRPSQYTLDNVLRLCSLKGLLQRG--EQFHGYAIKTCFDLNAFVV 171
           AF +F  M  E   G RP+ +T   +LR C   G  + G   Q HG   KT +  N  V 
Sbjct: 146 AFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVC 205

Query: 172 TGLVDMYAKCKC--IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM--- 226
             L+ MY  C       A+ +F   P  ++ + W  +++ Y++ G        F+DM   
Sbjct: 206 NALISMYGSCTVGPPILAQRVFDGTPI-RDLITWNALMSVYAKKGDVASTFTLFKDMQRG 264

Query: 227 --RVEGVESNQFTFPSILTACAAVSARDFGA-QVHGCILSSGFEANVYVQSALIDMYAKC 283
             R++ +   + TF S++TA +  S       QV   +L SG  +++YV SAL+  +A+ 
Sbjct: 265 DSRIQ-LRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFARH 323

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
           G  D A+ +    +  N V+ N +IVG  RQ F +EA+ +F       + ++  TY  +L
Sbjct: 324 GLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTR-NTVDVNADTYVVLL 382

Query: 344 NCFA----SNIDLNNAKSVHSLIVKTGFEGYKF-VNNALIDMYAKQGNLDCAFMVFNLMQ 398
           +  A    S   L   + VH  +++TG    K  V+N L++MYAK G ++ A  +F LM+
Sbjct: 383 SALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLME 442

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
             D ISW ++I+    +G+ EEA+ ++S MR S I P +  + S LS+CA L +L  GQQ
Sbjct: 443 ATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQ 502

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTAL--IMGCAQN 516
           VH   +K G     SV N LV +Y +CG ++D  +VF+SM   D ++W  +  +M  +Q 
Sbjct: 503 VHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQT 562

Query: 517 GKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH 576
               E ++ ++ M+  G  P+ +TF+ LL A S   + E  +    ++ K +G+      
Sbjct: 563 -PISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMK-HGVMEDNVV 620

Query: 577 YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
              +I    +SG +   + L   M    DA  W +++S    +G+L+
Sbjct: 621 DNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQ 667



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 126/275 (45%), Gaps = 35/275 (12%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDR-DGFTWNTMIAAYANSGRLREAKKLFNETPFK 96
           ++ AL+  ++ SG++     LF  MSDR D  +WN+MI+ Y  +G L+            
Sbjct: 620 VDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQ------------ 667

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
                              EA +  W M   G      T   +L  C+    L+RG + H
Sbjct: 668 -------------------EAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELH 708

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
            + I++  + +  V + LVDMY+KC  +  A  LF      +N  +W +MI+GY+++G G
Sbjct: 709 AFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQ-RNEFSWNSMISGYARHGLG 767

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
            KAIE F +M       +  TF S+L+AC+     + G +    +   G    +   S +
Sbjct: 768 RKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMMPDHGILPQIEHYSCV 827

Query: 277 IDMYAKCGDLDSARRLLEYSEID-NEVSWNSMIVG 310
           ID+  + G +D  +  ++   I+ N + W +++V 
Sbjct: 828 IDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVA 862



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 177/388 (45%), Gaps = 28/388 (7%)

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           +H  ++  G   ++++ + L++ YAK   L +A ++ +     N VSW  ++ G+   G 
Sbjct: 83  LHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGI 142

Query: 317 HKEALSLFKKMHARDI----KIDDFTYPSVLN-CFASNID-LNNAKSVHSLIVKTGFEGY 370
            +EA  +F+ M  R++    +   FT+ ++L  C     D L  A  VH L+ KT +   
Sbjct: 143 AEEAFRVFRAM-LREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASN 201

Query: 371 KFVNNALIDMYAK--QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
             V NALI MY     G    A  VF+    +D+I+W +L++  A  G        F DM
Sbjct: 202 TTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDM 261

Query: 429 -----RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
                RI     +H   S I +A           QV    LKSG  S L V ++LV  +A
Sbjct: 262 QRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFA 321

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT-KPDYITFV 542
           + G  ++A  +F S+  ++ +T   LI+G  +    +EA++ +  +  R T   +  T+V
Sbjct: 322 RHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIF--VGTRNTVDVNADTYV 379

Query: 543 GLLFACSHAGLAENARWYFESMDKVYG--IKPGPDHYAC-----MIDLLGRSGKLIEAKA 595
            LL A +   ++E           V+G  ++ G           ++++  + G  IE+ +
Sbjct: 380 VLLSALAEYSISEEG---LRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGA-IESAS 435

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLE 623
            + Q++   D   W  ++SA   +G+ E
Sbjct: 436 KIFQLMEATDRISWNTIISALDQNGNCE 463



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 101/207 (48%), Gaps = 13/207 (6%)

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           D N+ +++H  ++K G     F+ N L++ YAK   L  A  VF+ M +++ +SWT L++
Sbjct: 76  DANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVS 135

Query: 411 GCAYHGSYEEALKYFSDMR---ISGICPDHVVVSSILSACAE--LTVLEFGQQVHAVFLK 465
           G   HG  EEA + F  M     +G  P      ++L AC +     L F  QVH +  K
Sbjct: 136 GYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSK 195

Query: 466 SGGCSSLSVDNSLVLVYAKC--GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEAL 523
           +   S+ +V N+L+ +Y  C  G    A RVFD    RD+ITW AL+   A+ G      
Sbjct: 196 TEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTF 255

Query: 524 QFYDQMLARG-----TKPDYITFVGLL 545
             +  M  RG      +P   TF  L+
Sbjct: 256 TLFKDM-QRGDSRIQLRPTEHTFGSLI 281



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 72/176 (40%), Gaps = 32/176 (18%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           ALVD +S  G +D A +LF  M+ R+ F+WN+MI+ YA                      
Sbjct: 725 ALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYA---------------------- 762

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
                     +GL  +A E+F +M      P   T  +VL  CS  GL++RG ++     
Sbjct: 763 ---------RHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMMP 813

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
                      + ++D+  +   I + +   +  P   N + W T++    Q+  G
Sbjct: 814 DHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVACRQSKDG 869


>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 833

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 296/791 (37%), Positives = 431/791 (54%), Gaps = 74/791 (9%)

Query: 73  MIAAYANSGRLREAKKLF--NETP-FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGY 129
           +I  Y +S  +  A  L   N TP   + + W+ LI    ++     A  LF +M+   +
Sbjct: 63  LIYTYISSNSITNAILLLEKNVTPSHSSVYWWNQLIRHALHFNSPNTALRLFRRMKTLHW 122

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
            P  YT   V + C      + G   HG  I+  F+ N FV   ++ MY KCK +  A  
Sbjct: 123 TPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARK 182

Query: 190 LFK--MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE-GVESNQFTFPSILTACA 246
           +F    +    + V W ++++ YS       A+  FR+M V  G+  +     +IL  C 
Sbjct: 183 VFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCG 242

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            +     G QVHG  + SG   +V+V +AL+DMYAKCG ++ A ++ E     + V+WN+
Sbjct: 243 YLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNA 302

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS------------------ 348
           M+ G+++ G  ++ALSLF KM    I+ D  T+ SV++ +A                   
Sbjct: 303 MVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCR 362

Query: 349 ---NI--------------DLNNAKSVHSLIVKTGFEGYK-------FVNNALIDMYAKQ 384
              N+               L + K  H   VK   +G          V NALIDMYAK 
Sbjct: 363 CRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKC 422

Query: 385 GNLDCAFMVFNLM--QDKDVISWTSLITGCAYHGSYEEALKYFSDM-RISG-ICPDHVVV 440
            +L+ A  +F+ +  +D+DV++WT +I G A HG    AL+ FS+M +I   I P+   +
Sbjct: 423 KSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTI 482

Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSS--LSVDNSLVLVYAKCGCINDANRVFDSM 498
           S +L ACA L  L+FG+Q+HA  L+     S  L V N L+ +Y+K G ++ A  VFDSM
Sbjct: 483 SCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSM 542

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENAR 558
             R+ ++WT+L+ G   +G+ ++A + +D+M       D ITF+ +L+ACSH+G      
Sbjct: 543 SKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSG------ 596

Query: 559 WYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRV 618
                MD  +G+ PG +HYACM+DLLGR+G+L EA  L++ M  EP   VW ALLSACR+
Sbjct: 597 -----MD--FGVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRI 649

Query: 619 HGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCS 678
           H + EL E AA  L EL+  N   Y  LSN+Y+ A +W+D AR+  LMK  GI+K PG S
Sbjct: 650 HSNEELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGWS 709

Query: 679 WVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGL 738
           WV+    +  F   DR H     IY  + +++  IK        NF+LH+V++E K   L
Sbjct: 710 WVKGRKGMETFYVGDRTHLQSQKIYETLADLIKRIKA-------NFSLHDVDDEEKGDQL 762

Query: 739 AYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHF 798
           + HSEKLA+A+ +LTLP GAPIRI KNLR+CGD H+A+ YIS +    IILRDS+RFH F
Sbjct: 763 SEHSEKLALAYAILTLPPGAPIRITKNLRICGDFHSAITYISMIVEHEIILRDSSRFHQF 822

Query: 799 KAGNCSCGDYW 809
           K G+CSC  YW
Sbjct: 823 KNGSCSCKGYW 833



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 130/399 (32%), Positives = 213/399 (53%), Gaps = 32/399 (8%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF----NETPFK 96
           ALVD ++  G++++A ++FE+M  +D  TWN M+  Y+ +GR  +A  LF     E    
Sbjct: 271 ALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIES 330

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
           +  TWSS+I GY+  G   EA ++F QM     RP+  TL ++L  C+  G L  G++ H
Sbjct: 331 DVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETH 390

Query: 157 GYAIKTCF------DLNAF-VVTGLVDMYAKCKCIFEAEYLF-KMFPDGKNHVAWTTMIT 208
            Y++K         D +   V+  L+DMYAKCK +  A  +F ++ P  ++ V WT MI 
Sbjct: 391 CYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIG 450

Query: 209 GYSQNGYGFKAIECFRDM-RVEG-VESNQFTFPSILTACAAVSARDFGAQVHGCIL-SSG 265
           GY+Q+G    A++ F +M +++  +  N FT   +L ACA ++A  FG Q+H  +L  S 
Sbjct: 451 GYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSR 510

Query: 266 FEANV-YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLF 324
            +++V +V + LIDMY+K GD+D+A+ + +     N VSW S++ G+   G  ++A  +F
Sbjct: 511 IDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVF 570

Query: 325 KKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK 383
            +M    + +D  T+  VL  C  S +D           V  G E Y      ++D+  +
Sbjct: 571 DEMRKEALVLDGITFLVVLYACSHSGMDFG---------VDPGVEHYA----CMVDLLGR 617

Query: 384 QGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEA 421
            G L  A  + N M  +   + W +L++ C  H + E A
Sbjct: 618 AGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELA 656



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 152/499 (30%), Positives = 235/499 (47%), Gaps = 66/499 (13%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNF---FTWSSLIYGYSNYGLDIEAFELFWQM 124
           F  N +I+ Y     +  A+K+F+E  ++      TW+S++  YS+  +   A  LF +M
Sbjct: 162 FVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREM 221

Query: 125 QLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
            +  G  P    + N+L +C   GL   G Q HG+ +++    + FV   LVDMYAKC  
Sbjct: 222 TVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGK 281

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES---------- 233
           + +A  +F+     K+ V W  M+TGYSQNG    A+  F  MR E +ES          
Sbjct: 282 MEDANKVFERM-RFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVIS 340

Query: 234 -------------------------NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEA 268
                                    N  T  S+L+ACA+V A   G + H   +    + 
Sbjct: 341 GYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKG 400

Query: 269 -------NVYVQSALIDMYAKCGDLDSARRLL-EYSEIDNE-VSWNSMIVGFARQGFHKE 319
                  ++ V +ALIDMYAKC  L+ AR +  E    D + V+W  MI G+A+ G    
Sbjct: 401 EHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANH 460

Query: 320 ALSLFKKMHARD--IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF--EGYKFVNN 375
           AL LF +M   D  I  +DFT   VL   A    L   K +H+ +++         FV N
Sbjct: 461 ALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVAN 520

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
            LIDMY+K G++D A +VF+ M  ++ +SWTSL+TG   HG  E+A + F +MR   +  
Sbjct: 521 CLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVL 580

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           D +    +L AC+  + ++FG       ++   C        +V +  + G + +A R+ 
Sbjct: 581 DGITFLVVLYACSH-SGMDFGVDPG---VEHYAC--------MVDLLGRAGRLGEAMRLI 628

Query: 496 DSMHTRDV-ITWTALIMGC 513
           + M      + W AL+  C
Sbjct: 629 NDMPIEPTPVVWIALLSAC 647



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 192/434 (44%), Gaps = 58/434 (13%)

Query: 257 VHGCILSSGFEANVYVQ-SALIDMYAKCGDLDSARRLLEYSEIDNEVS---WNSMIVGFA 312
           +H   + +G   N Y   + LI  Y     + +A  LLE +   +  S   WN +I    
Sbjct: 43  LHQQYIINGHLLNSYTNVTNLIYTYISSNSITNAILLLEKNVTPSHSSVYWWNQLI---- 98

Query: 313 RQGFH----KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
           R   H      AL LF++M       D +T+P V        +     S+H  +++ GFE
Sbjct: 99  RHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFE 158

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK---DVISWTSLITGCAYHGSYEEALKYF 425
              FV NA+I MY K   +  A  VF+ +  +   D ++W S+++  ++      A+  F
Sbjct: 159 SNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLF 218

Query: 426 SDMRIS-GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
            +M +  GI PD V V +IL  C  L +   G+QVH   ++SG    + V N+LV +YAK
Sbjct: 219 REMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAK 278

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGK-------------------------- 518
           CG + DAN+VF+ M  +DV+TW A++ G +QNG+                          
Sbjct: 279 CGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSV 338

Query: 519 ---------GKEALQFYDQMLARGTKPDYITFVGLLFACSHAG-LAENARWYFESMDKVY 568
                    G EA+  + QM     +P+ +T + LL AC+  G L      +  S+  + 
Sbjct: 339 ISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFIL 398

Query: 569 GIKPGPDH-----YACMIDLLGRSGKLIEAKALLDQMV-GEPDATVWKALLSACRVHGDL 622
             +   D         +ID+  +   L  A+A+ D++   + D   W  ++     HGD 
Sbjct: 399 KGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDA 458

Query: 623 ELGERAANNLFELE 636
               +  + +F+++
Sbjct: 459 NHALQLFSEMFKID 472


>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
 gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
          Length = 713

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 264/667 (39%), Positives = 382/667 (57%), Gaps = 7/667 (1%)

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
           L    + H        D N F+   LVD Y+K   +  A+  F        H +W  ++ 
Sbjct: 48  LDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAH-SWNILMA 106

Query: 209 GYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEA 268
            Y+QNG+   A   F  M  +GV  N  T  + L AC A      G +++  I S   E 
Sbjct: 107 AYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEI 166

Query: 269 NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH 328
           + +V+S+LI MY +C +++ A R  + S   + V W +MI  +A       AL L ++M 
Sbjct: 167 DSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMD 226

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE-GYKFVNNALIDMYAKQGNL 387
              IK+   TY S+L+  AS +DL N  + H      G +     V   L+++Y K G +
Sbjct: 227 LEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRV 286

Query: 388 DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSAC 447
           D A  V + M  +  +SWT++I   A +G+  EA+  F  M + G  P  + + S++ +C
Sbjct: 287 DDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSC 346

Query: 448 AELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAKCGCINDANRVFD--SMHTRDVI 504
           A L  L  G+++HA    S   S SL + N+++ +Y KCG +  A  VF+   + TR V+
Sbjct: 347 AVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVV 406

Query: 505 TWTALIMGCAQNGKGKEALQFYDQMLARG-TKPDYITFVGLLFACSHAGLAENARWYFES 563
           TWTA+I   AQNG G+EA++ + +ML  G T+P+ +TF+ +L ACSH G  E A  +F S
Sbjct: 407 TWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCS 466

Query: 564 MDKVYGIKPGPDHYACMIDLLGRSGKLIEA-KALLDQMVGEPDATVWKALLSACRVHGDL 622
           M   +G+ P  DHY C++DLLGR+G+L EA K LL     E D   W A LSAC+++GDL
Sbjct: 467 MGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDL 526

Query: 623 ELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVET 682
           E  +RAA  + ELEP N    V LSN+Y+  G+  D AR+R  MKS G++K  G SW+E 
Sbjct: 527 ERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEI 586

Query: 683 NSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHS 742
           N++VH F+  D  HP + +IYS+++ +   IKEAGYVPD    L +V+EE K   L YHS
Sbjct: 587 NNRVHEFMVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMVLRDVDEEKKVQLLGYHS 646

Query: 743 EKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGN 802
           E+LA+A G+++ P G  +R+ KNLRVC DCH A K+IS +  R II+RD++RFHHFK G 
Sbjct: 647 ERLAMALGIISTPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGV 706

Query: 803 CSCGDYW 809
           CSCGDYW
Sbjct: 707 CSCGDYW 713



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 143/471 (30%), Positives = 232/471 (49%), Gaps = 11/471 (2%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            Q+  +  DR+ F  N ++ AY+  G L  A+  F      N  +W+ L+  Y+  G   
Sbjct: 56  AQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRITLHNAHSWNILMAAYAQNGHPR 115

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
            A  LF  M  +G RP+  TL   L  C+    L  G + +        ++++ V + L+
Sbjct: 116 GAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVESSLI 175

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
            MY +C+ I EAE  F   P+ K+ V WT MI+ Y+ N    +A+E  R M +EG++   
Sbjct: 176 TMYGRCREIEEAERAFDRSPE-KDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGL 234

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFE-ANVYVQSALIDMYAKCGDLDSARRLLE 294
            T+ S+L ACA+      G   H    + G + ++  V   L+++Y KCG +D ARR+L+
Sbjct: 235 PTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLD 294

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
              +   VSW +MI  +A+ G   EA++LF+ M     +  D T  SV++  A    L+ 
Sbjct: 295 AMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSL 354

Query: 355 AKSVHSLIVKT-GFEGYKFVNNALIDMYAKQGNLDCAFMVFNL--MQDKDVISWTSLITG 411
            K +H+ I  +  F     + NA+I MY K GNL+ A  VF    ++ + V++WT++I  
Sbjct: 355 GKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRA 414

Query: 412 CAYHGSYEEALKYFSDMRI-SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
            A +G  EEA++ F +M I  G  P+ V   S+L AC+ L  LE   + H   +      
Sbjct: 415 YAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWE-HFCSMGPDFGV 473

Query: 471 SLSVDN--SLVLVYAKCGCINDANRVF--DSMHTRDVITWTALIMGCAQNG 517
             + D+   LV +  + G + +A ++         DV+ W A +  C  NG
Sbjct: 474 PPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNG 524



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 117/255 (45%), Gaps = 41/255 (16%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +   G +D+A ++ + M  R   +W  MIAAYA +G                        
Sbjct: 280 YGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNA---------------------- 317

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT-CF 164
                     EA  LF  M LEG  PS  TL +V+  C++ G L  G++ H     +  F
Sbjct: 318 ---------AEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSF 368

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP-DGKNHVAWTTMITGYSQNGYGFKAIECF 223
             +  ++  ++ MY KC  +  A  +F+  P   ++ V WT MI  Y+QNG G +AIE F
Sbjct: 369 SQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELF 428

Query: 224 RDMRVE-GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF----EANVYVQSALID 278
           ++M ++ G E N+ TF S+L AC+ +   +  A  H C +   F      + Y    L+D
Sbjct: 429 QEMLIDGGTEPNRVTFLSVLCACSHLGQLE-QAWEHFCSMGPDFGVPPAGDHYC--CLVD 485

Query: 279 MYAKCGDLDSARRLL 293
           +  + G L  A +LL
Sbjct: 486 LLGRAGRLGEAEKLL 500


>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 672

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 261/636 (41%), Positives = 385/636 (60%), Gaps = 20/636 (3%)

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +F  + D  +  +W ++I  ++++G   +A+  F  MR   +  N+ TFP  + +C+++ 
Sbjct: 41  MFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLY 100

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
               G Q+H      G+ ++++V SALIDMY+KCG L+ AR+L +     N VSW SMI 
Sbjct: 101 DLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMIS 160

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSV-----------LNCFASNIDLNNAKSV 358
           G+ +    +EA+ LFK+     + +D+  Y  +           L C  S       KSV
Sbjct: 161 GYVQNERAREAVFLFKEF----LLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSV 216

Query: 359 ----HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
               H L VK GFEG   V N L+D YAK G +  +  VF+ M++ DV SW SLI   A 
Sbjct: 217 TECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQ 276

Query: 415 HGSYEEALKYFSDMRISG-ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
           +G   EA   FSDM   G +  + V +S++L ACA    L+ G+ +H   +K     +L 
Sbjct: 277 NGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLV 336

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
           V  S+V +Y KCG +  A + FD +  ++V +WT ++ G   +G GKEA++ + +M+  G
Sbjct: 337 VGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCG 396

Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
            KP+YITFV +L ACSHAGL +    +F  M   + ++PG +HY+CM+DLLGR+G L EA
Sbjct: 397 IKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEA 456

Query: 594 KALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTA 653
             L+ +M  +PD  VW +LL ACR+H ++ELGE +A  LF+L+P N   YV LSN+Y+ A
Sbjct: 457 YGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADA 516

Query: 654 GKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLI 713
           G+W+D  R+R LMK+ G+ K PG S VE   +VH+F+  D+ HP    IY  +DE+ + +
Sbjct: 517 GRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKL 576

Query: 714 KEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCH 773
           +E GY+P++   L++V+ E K + L  HSEKLAVAFG++    G+ I+I KNLR+CGDCH
Sbjct: 577 QEVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDCH 636

Query: 774 TAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            A+K IS +  R I++RDS RFHHFK G CSCGDYW
Sbjct: 637 FAIKLISKIVNREIVIRDSKRFHHFKDGLCSCGDYW 672



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/434 (29%), Positives = 222/434 (51%), Gaps = 21/434 (4%)

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
           + ++W+S+I  ++  G  ++A   F  M+     P++ T    ++ CS    L  G+Q H
Sbjct: 50  SVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIH 109

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
             A    +  + FV + L+DMY+KC  + +A  LF   P+ +N V+WT+MI+GY QN   
Sbjct: 110 QQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPE-RNVVSWTSMISGYVQNERA 168

Query: 217 FKAIECFRD-MRVEGVESNQFT----------FPSILTACAAVSARDFGAQVHGCILSSG 265
            +A+  F++ + V+  + ++               +++ACA V  +     VHG  +  G
Sbjct: 169 REAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKG 228

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
           FE  + V + L+D YAKCG++  +R++ +  E  +  SWNS+I  +A+ G   EA SLF 
Sbjct: 229 FEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFS 288

Query: 326 KMHAR-DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
            M  R +++ +  T  +VL   A +  L   K +H  +VK   E    V  +++DMY K 
Sbjct: 289 DMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKC 348

Query: 385 GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
           G ++ A   F+ ++ K+V SWT ++ G   HG  +EA+K F +M   GI P+++   S+L
Sbjct: 349 GRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVL 408

Query: 445 SACAELTVLEFG----QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT 500
           +AC+   +L+ G     ++   F    G    S    +V +  + G + +A  +   M  
Sbjct: 409 AACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYS---CMVDLLGRAGYLKEAYGLIQEMKV 465

Query: 501 R-DVITWTALIMGC 513
           + D I W +L+  C
Sbjct: 466 KPDFIVWGSLLGAC 479



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 182/396 (45%), Gaps = 25/396 (6%)

Query: 42  ALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTW 101
           +L D     +I +   +F   SD   F  + +I  Y+  G L +A+KLF+E P +N  +W
Sbjct: 98  SLYDLCAGKQIHQQAFVFGYGSDI--FVASALIDMYSKCGYLNDARKLFDEIPERNVVSW 155

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQL------EGYRPSQYTLDNVLRLCSLKG-----LLQ 150
           +S+I GY       EA  LF +  L      +        +D+VL  C +       +  
Sbjct: 156 TSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKS 215

Query: 151 RGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
             E  HG A+K  F+    V   L+D YAKC  I  +  +F    +  +  +W ++I  Y
Sbjct: 216 VTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEE-TDVCSWNSLIAVY 274

Query: 211 SQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
           +QNG   +A   F DM   G V  N  T  ++L ACA   A   G  +H  ++    E N
Sbjct: 275 AQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDN 334

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA 329
           + V ++++DMY KCG ++ AR+  +  +  N  SW  M+ G+   G  KEA+ +F +M  
Sbjct: 335 LVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIR 394

Query: 330 RDIKIDDFTYPSVLNCFASNIDLNNA-----KSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
             IK +  T+ SVL   +    L        K      V+ G E Y    + ++D+  + 
Sbjct: 395 CGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHY----SCMVDLLGRA 450

Query: 385 GNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGSYE 419
           G L  A+ +   M+ K D I W SL+  C  H + E
Sbjct: 451 GYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVE 486


>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 285/774 (36%), Positives = 426/774 (55%), Gaps = 82/774 (10%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY-SNYGLDIEAFELFW 122
           D D   WN  I+AY   G+   A  +FN    ++  T++++I GY SN   D  A ++F 
Sbjct: 57  DSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDC-ARKVFE 115

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           +M      P +                               DL ++ V  ++  Y K  
Sbjct: 116 KM------PDR-------------------------------DLISWNV--MLSGYVKNG 136

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            +  A  LF   P+ K+ V+W  M++G++QNG+  +A + F  M V+    N+ ++  +L
Sbjct: 137 NLSAARALFNQMPE-KDVVSWNAMLSGFAQNGFVEEARKIFDQMLVK----NEISWNGLL 191

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           +A    + R   A+    +  S  +  +   + L+  Y +   LD AR L +   + +++
Sbjct: 192 SAYVQ-NGRIEDARR---LFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKI 247

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS----- 357
           SWN MI G+A+ G   EA  LF+++  RD+    F + ++++ F  N  L+ A       
Sbjct: 248 SWNIMITGYAQNGLLSEARRLFEELPIRDV----FAWTAMVSGFVQNGMLDEATRIFEEM 303

Query: 358 ---------------VHSLIVKTGFEGYKFVN-------NALIDMYAKQGNLDCAFMVFN 395
                          V S  ++   E +  +        N ++  YA+ GN+D A ++F+
Sbjct: 304 PEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFD 363

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
            M  +D ISW ++I+G A  G  EEAL  F  M+  G   +   ++  LS+CAE+  LE 
Sbjct: 364 EMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALEL 423

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
           G+Q+H   +K+G  +     N+L+ +Y KCG I +A  VF+ +  +D+++W  +I G A+
Sbjct: 424 GKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYAR 483

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
           +G GKEAL  ++ M     KPD +T VG+L ACSH GL +    YF SM + YGI     
Sbjct: 484 HGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAK 542

Query: 576 HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
           HY CMIDLLGR+G+L EA  L+  M   PDA  W ALL A R+HGD ELGE+AA  +FE+
Sbjct: 543 HYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEM 602

Query: 636 EPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG 695
           EP N+  YV LSN+Y+ +G+W +   +R  M+ +G++K PG SWVE  ++ HIF   D  
Sbjct: 603 EPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCS 662

Query: 696 HPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLP 755
           HP    IY+ ++E+ L +K+ G+V      LH+VEEE KE  L YHSEKLAVAFG+L++P
Sbjct: 663 HPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIP 722

Query: 756 QGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            G PIR+ KNLRVC DCH A+K+IS +  R II+RDSNRFHHF  G+CSCGDYW
Sbjct: 723 PGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 133/500 (26%), Positives = 244/500 (48%), Gaps = 43/500 (8%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  + ++ + D A ++FEKM DRD  +WN M++ Y  +G L  A+ LFN+ P K+  
Sbjct: 95  NAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVV 154

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           +W++++ G++  G   EA ++F QM ++    ++ + + +L      G ++   +     
Sbjct: 155 SWNAMLSGFAQNGFVEEARKIFDQMLVK----NEISWNGLLSAYVQNGRIEDARRL---- 206

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
             +  D        L+  Y + K + +A  LF   P  ++ ++W  MITGY+QNG   +A
Sbjct: 207 FDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMP-VRDKISWNIMITGYAQNGLLSEA 265

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARD----------------FGAQVHGCILS 263
              F ++ +  V    F + ++++        D                + A + G + S
Sbjct: 266 RRLFEELPIRDV----FAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQS 321

Query: 264 SGFEA-----------NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
              E            N    + ++  YA+CG++D A+ L +     + +SW +MI G+A
Sbjct: 322 QQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYA 381

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
           + G  +EAL LF KM      ++       L+  A    L   K +H  +VK GF+    
Sbjct: 382 QSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYI 441

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
             NAL+ MY K G+++ AF VF  + +KD++SW ++I G A HG  +EAL  F  M+++ 
Sbjct: 442 AGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT- 500

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQ-VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
           I PD V +  +LSAC+   +++ G +  ++++   G  ++      ++ +  + G +++A
Sbjct: 501 IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEA 560

Query: 492 NRVFDSM-HTRDVITWTALI 510
             +  SM    D  TW AL+
Sbjct: 561 LNLMKSMPFYPDAATWGALL 580



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/394 (31%), Positives = 193/394 (48%), Gaps = 60/394 (15%)

Query: 52  IDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNY 111
           +D+A  LF++M  RD  +WN MI  YA +G L EA++LF E P ++ F W++++ G+   
Sbjct: 231 LDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQN 290

Query: 112 GLDIEAFELF----------WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIK 161
           G+  EA  +F          W   + GY  SQ              + +  E F     +
Sbjct: 291 GMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQ-------------IEKARELFDQMPSR 337

Query: 162 TCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIE 221
                N  +VTG    YA+C  I +A+ LF   P  ++ ++W  MI+GY+Q+G   +A+ 
Sbjct: 338 NTSSWNT-MVTG----YAQCGNIDQAKILFDEMPQ-RDCISWAAMISGYAQSGQSEEALH 391

Query: 222 CFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYA 281
            F  M+ +G   N+      L++CA ++A + G Q+HG ++ +GF+      +AL+ MY 
Sbjct: 392 LFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYG 451

Query: 282 KCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPS 341
           KCG ++ A  + E     + VSWN+MI G+AR GF KEAL+LF+ M    IK DD T   
Sbjct: 452 KCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKM-TIKPDDVTLVG 510

Query: 342 VLNCFASNIDLNNAKSVHSLIVKTGFE-------GYKFVNNA-----LIDMYAKQGNLDC 389
           VL+  +           H+ +V  G E        Y    NA     +ID+  + G LD 
Sbjct: 511 VLSACS-----------HTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDE 559

Query: 390 AFMVFNLMQD----KDVISWTSLITGCAYHGSYE 419
           A    NLM+      D  +W +L+     HG  E
Sbjct: 560 A---LNLMKSMPFYPDAATWGALLGASRIHGDTE 590


>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
 gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 243/609 (39%), Positives = 369/609 (60%), Gaps = 40/609 (6%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
            + +++ +C        G +VH  I  SGF   +++ + L++MYAKC  L  +++L +  
Sbjct: 72  VYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEM 131

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA- 355
              +  SWN +I G+A+ G  +EA SLF KM  RD    +F++ ++++ +  +   N A 
Sbjct: 132 PERDLCSWNILISGYAKMGLLQEAKSLFDKMPERD----NFSWTAMISGYVRHDRPNEAL 187

Query: 356 -----------------------------------KSVHSLIVKTGFEGYKFVNNALIDM 380
                                              K +H  I++TG +  + V +AL DM
Sbjct: 188 ELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDM 247

Query: 381 YAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVV 440
           Y K G+++ A  +F+ M D+D+++WT++I      G  +E    F+D+  SGI P+    
Sbjct: 248 YGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTF 307

Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT 500
           S +L+ACA  T  E G++VH    + G        ++LV +Y+KCG +  A RVF     
Sbjct: 308 SGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQ 367

Query: 501 RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWY 560
            D+ +WT+LI G AQNG+  EA+++++ ++  GT+PD+ITFVG+L AC+HAGL +    Y
Sbjct: 368 PDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDY 427

Query: 561 FESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
           F S+ + YG+    DHYAC+IDLL RSG+  EA+ ++ +M  +PD  +W +LL  CR+HG
Sbjct: 428 FHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHG 487

Query: 621 DLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWV 680
           +L+L +RAA  LFE+EP N   YV L+N+Y+TAG W + A++RK M  RG+ K+PG SW+
Sbjct: 488 NLKLAQRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWI 547

Query: 681 ETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAY 740
                VH+F+  D  HP   +I   + ++   +KE G+VPD NF LH+VE+E KE  L+Y
Sbjct: 548 AIKRDVHVFLVGDDSHPKSKEINEFLGKLSKRMKEEGFVPDTNFVLHDVEDEQKEQNLSY 607

Query: 741 HSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKA 800
           HSEKLAVAFG+++ P+G PI++FKNLR C DCHTA+K+IS +  R II+RDSNRFH F+ 
Sbjct: 608 HSEKLAVAFGIISTPEGTPIKVFKNLRTCVDCHTAIKFISKITNRKIIVRDSNRFHFFED 667

Query: 801 GNCSCGDYW 809
           G+CSC DYW
Sbjct: 668 GHCSCRDYW 676



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 149/553 (26%), Positives = 265/553 (47%), Gaps = 53/553 (9%)

Query: 39  LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF 98
           LNR L  ++    + ++ +LF++M +RD  +WN +I+ YA  G L+EAK LF++ P ++ 
Sbjct: 108 LNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDN 167

Query: 99  FTWSSLIYGYSNYGLDIEAFELFWQMQL-EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
           F+W+++I GY  +    EA ELF  M+  +  + +++T+ + L   +    L+ G++ HG
Sbjct: 168 FSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHG 227

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
           Y ++T  D +  V + L DMY KC  I EA ++F    D ++ V WT MI  Y Q+G   
Sbjct: 228 YIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVD-RDIVTWTAMIDRYFQDGRRK 286

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           +  + F D+   G+  N+FTF  +L ACA  ++ + G +VHG +   GF+   +  SAL+
Sbjct: 287 EGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALV 346

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
            MY+KCG++ SA R+ + +   +  SW S+I G+A+ G   EA+  F+ +     + D  
Sbjct: 347 HMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHI 406

Query: 338 TYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
           T+  VL+ C  + +        HS+  + G          +ID+ A+ G  D A  + + 
Sbjct: 407 TFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISK 466

Query: 397 MQDK-DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
           M  K D   W SL+ GC  HG+ +                        L+  A   + E 
Sbjct: 467 MSMKPDKFLWASLLGGCRIHGNLK------------------------LAQRAAEALFEI 502

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVI-----TWTAL- 509
             +  A ++            +L  +YA  G  ++  ++  +M  R V+     +W A+ 
Sbjct: 503 EPENPATYV------------TLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIK 550

Query: 510 ------IMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG-LLFACSHAGLAENARWYFE 562
                 ++G   + K KE  +F  ++  R  +  ++     +L         +N  ++ E
Sbjct: 551 RDVHVFLVGDDSHPKSKEINEFLGKLSKRMKEEGFVPDTNFVLHDVEDEQKEQNLSYHSE 610

Query: 563 SMDKVYGIKPGPD 575
            +   +GI   P+
Sbjct: 611 KLAVAFGIISTPE 623



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 144/492 (29%), Positives = 241/492 (48%), Gaps = 39/492 (7%)

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA ++  Q+     +PS      +++ C    LLQ+G++ H +   + F    F++  L+
Sbjct: 57  EALQILHQID----KPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLL 112

Query: 176 DMYAKCKCIFEAEYLFKMFPD------------------------------GKNHVAWTT 205
           +MYAKC  + +++ LF   P+                               +++ +WT 
Sbjct: 113 EMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTA 172

Query: 206 MITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS 264
           MI+GY ++    +A+E FR M R +  +SN+FT  S L A AAV     G ++HG I+ +
Sbjct: 173 MISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRT 232

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLF 324
           G +++  V SAL DMY KCG ++ AR + +     + V+W +MI  + + G  KE   LF
Sbjct: 233 GLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLF 292

Query: 325 KKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
             +    I+ ++FT+  VLN  A+       K VH  + + GF+ + F  +AL+ MY+K 
Sbjct: 293 ADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKC 352

Query: 385 GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
           GN+  A  VF      D+ SWTSLI G A +G  +EA++YF  +  SG  PDH+    +L
Sbjct: 353 GNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVL 412

Query: 445 SACAELTVLEFG-QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-D 502
           SACA   +++ G    H++  + G   +      ++ + A+ G  ++A  +   M  + D
Sbjct: 413 SACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPD 472

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
              W +L+ GC  +G  K A Q   + L      +  T+V L    + AG+        +
Sbjct: 473 KFLWASLLGGCRIHGNLKLA-QRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIRK 531

Query: 563 SMDKVYGI-KPG 573
           +MD    + KPG
Sbjct: 532 TMDDRGVVKKPG 543



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 105/247 (42%), Gaps = 27/247 (10%)

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           I +  +Q  L  A  + + +       +++LI  C      ++  K    +++SG  P  
Sbjct: 46  IHILCQQNRLKEALQILHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGL 105

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
            +++ +L   A+   L   Q++     +   CS     N L+  YAK G + +A  +FD 
Sbjct: 106 FILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSW----NILISGYAKMGLLQEAKSLFDK 161

Query: 498 MHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV-------GLLFACSH 550
           M  RD  +WTA+I G  ++ +  EAL+ + +M+ R        F             C  
Sbjct: 162 MPERDNFSWTAMISGYVRHDRPNEALELF-RMMKRSDNSKSNKFTVSSALAAAAAVPCLR 220

Query: 551 AGLAENARWYFESMDKVYGIKPGPDH----YACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
            G   +           Y ++ G D     ++ + D+ G+ G + EA+ + D+MV + D 
Sbjct: 221 IGKEIHG----------YIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMV-DRDI 269

Query: 607 TVWKALL 613
             W A++
Sbjct: 270 VTWTAMI 276


>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
          Length = 1012

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 261/724 (36%), Positives = 404/724 (55%), Gaps = 1/724 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N ++  Y   G L  A++LF+  P +N  ++ +L+  ++  G    A  LF +++
Sbjct: 95  DLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLR 154

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            EG+  +Q+ L  +L+L             H  A K   D NAFV +GL+D Y+ C  + 
Sbjct: 155 WEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVS 214

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +AE++F      K+ V WT M++ YS+N     A   F  MRV G + N F   S+L A 
Sbjct: 215 DAEHVFNGIVR-KDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAA 273

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
             + +   G  +HGC + +  +   +V  AL+DMYAKCGD+  AR   E    D+ +  +
Sbjct: 274 VCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLS 333

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
            MI  +A+   +++A  LF ++    +  ++++  SVL    + + L+  K +H+  +K 
Sbjct: 334 FMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKI 393

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G E   FV NAL+D YAK  ++D +  +F+ ++D + +SW +++ G +  G  EEAL  F
Sbjct: 394 GHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVF 453

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
            +M+ + +    V  SS+L ACA    +    Q+H    KS   +   + NSL+  YAKC
Sbjct: 454 CEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKC 513

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G I DA +VF  +  RD+I+W A+I G A +G+  +AL+ +D+M     + + ITFV LL
Sbjct: 514 GYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALL 573

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
             CS  GL  +    F+SM   +GIKP  +HY C++ LLGR+G+L +A   +  +   P 
Sbjct: 574 SVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPS 633

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
           A VW+ALLS+C +H ++ LG  +A  + E+EP +   YV LSNMY+ AG  +  A +RK 
Sbjct: 634 AMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKS 693

Query: 666 MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFA 725
           M++ G+RK PG SWVE   ++H F      HP    I + ++ + L     GY+PD+N  
Sbjct: 694 MRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVV 753

Query: 726 LHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLR 785
           LH+V++E K   L  HSE+LA+A+GL+  P G PIRI KNLR C DCHTA   IS +  R
Sbjct: 754 LHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKR 813

Query: 786 HIIL 789
            II+
Sbjct: 814 EIIV 817



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 155/513 (30%), Positives = 264/513 (51%), Gaps = 5/513 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D + F  + +I AY+    + +A+ +FN    K+   W++++  YS       AF +F +
Sbjct: 194 DHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSK 253

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M++ G +P+ + L +VL+       +  G+  HG AIKT  D    V   L+DMYAKC  
Sbjct: 254 MRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGD 313

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I +A   F+M P   + +  + MI+ Y+Q+    +A E F  +    V  N+++  S+L 
Sbjct: 314 IKDARLAFEMIP-YDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQ 372

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC  +   DFG Q+H   +  G E++++V +AL+D YAKC D+DS+ ++       NEVS
Sbjct: 373 ACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVS 432

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN+++VGF++ G  +EALS+F +M A  +     TY SVL   AS   + +A  +H  I 
Sbjct: 433 WNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIE 492

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K+ F     + N+LID YAK G +  A  VF  + ++D+ISW ++I+G A HG   +AL+
Sbjct: 493 KSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALE 552

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV-HAVFLKSGGCSSLSVDNSLVLVY 482
            F  M  S +  + +   ++LS C+   ++  G  +  ++ +  G   S+     +V + 
Sbjct: 553 LFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLL 612

Query: 483 AKCGCINDANR-VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
            + G +NDA + + D       + W AL+  C  + K     +F  + +      D  T+
Sbjct: 613 GRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIH-KNVALGRFSAEKILEIEPQDETTY 671

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
           V L    + AG  +      +SM  + G++  P
Sbjct: 672 VLLSNMYAAAGSLDQVALLRKSMRNI-GVRKVP 703



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 210/401 (52%), Gaps = 9/401 (2%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G   + ++D +      ++  YA  G +++A+  F   P+ +    S +I  Y+    + 
Sbjct: 287 GCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNE 346

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           +AFELF ++      P++Y+L +VL+ C+    L  G+Q H +AIK   + + FV   L+
Sbjct: 347 QAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALM 406

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           D YAKC  +  +  +F    D  N V+W T++ G+SQ+G G +A+  F +M+   +   Q
Sbjct: 407 DFYAKCNDMDSSLKIFSSLRDA-NEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQ 465

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            T+ S+L ACA+ ++     Q+H  I  S F  +  + ++LID YAKCG +  A ++ ++
Sbjct: 466 VTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQH 525

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               + +SWN++I G+A  G   +AL LF +M+  +++ +D T+ ++L+  +S   +N+ 
Sbjct: 526 LMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHG 585

Query: 356 KSV-HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM-VFNLMQDKDVISWTSLITGCA 413
            S+  S+ +  G +        ++ +  + G L+ A   + ++      + W +L++ C 
Sbjct: 586 LSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCI 645

Query: 414 YHGSYEEALKYFSDMRISGICPD----HVVVSSILSACAEL 450
            H +   AL  FS  +I  I P     +V++S++ +A   L
Sbjct: 646 IHKNV--ALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSL 684



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 6/125 (4%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           +  +L+D ++  G I +A ++F+ + +RD  +WN +I+ YA  G+  +A +LF+     N
Sbjct: 502 IGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSN 561

Query: 98  F----FTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRG 152
                 T+ +L+   S+ GL      LF  M+++ G +PS      ++RL    G L   
Sbjct: 562 VESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDA 621

Query: 153 EQFHG 157
            QF G
Sbjct: 622 LQFIG 626



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 30/217 (13%)

Query: 416 GSYEEALKYFSDMRIS-GICP-----DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
            +Y  AL++  D   S  I P     D    +  L  C        G+ VH   ++ GG 
Sbjct: 32  AAYAAALQWLEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGV 91

Query: 470 SSLSV--DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYD 527
             L +   N L+ +Y K G +  A R+FD M  R+++++  L+   AQ G  + A   + 
Sbjct: 92  GRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFR 151

Query: 528 QMLARGTKPD---YITFVGLLFACSHAGLA---ENARWYFESMDKVYGIKPGPDHYA--- 578
           ++   G + +     T + L  A   AGLA    +  W           K G DH A   
Sbjct: 152 RLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAW-----------KLGHDHNAFVG 200

Query: 579 -CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
             +ID       + +A+ + + +V   DA VW A++S
Sbjct: 201 SGLIDAYSLCSLVSDAEHVFNGIV-RKDAVVWTAMVS 236


>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 258/644 (40%), Positives = 386/644 (59%), Gaps = 33/644 (5%)

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           N + W TMI G++ +     ++  +  M   G+  N +TFP +L +CA       G Q+H
Sbjct: 28  NQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAKSKTFTEGQQIH 87

Query: 259 GCILSSGFEANVYVQSALIDMY-------------------------------AKCGDLD 287
           G +L  GF+ ++YV ++LI MY                               A  GD+ 
Sbjct: 88  GQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYASRGDIR 147

Query: 288 SARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFA 347
           SA++L +   + + VSWN+MI G+A  G +KEAL LF++M   +++ D+ TY +VL+  A
Sbjct: 148 SAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACA 207

Query: 348 SNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTS 407
            +  +   + VHS +   GF+    + NALID+Y+K G ++ A  +F  +  KDVISW +
Sbjct: 208 HSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNT 267

Query: 408 LITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK-- 465
           LI G  +   Y+EAL  F +M  SG  P+ V + S+L ACA L  ++ G+ +H    K  
Sbjct: 268 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRL 327

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
            G  ++ S+  SL+ +YAKCG I  A++VF+SM  + + +W A+I G A +G+   +   
Sbjct: 328 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDL 387

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
           + +M   G +PD ITFVGLL ACSH+G+ +  R  F SM + Y + P  +HY CMIDLLG
Sbjct: 388 FSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLG 447

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ 645
            SG   EA+ +++ M  EPD  +W +LL AC++HG++EL E  A NL ++EP N   Y+ 
Sbjct: 448 HSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPENPSSYIL 507

Query: 646 LSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSK 705
           LSN+Y++AG+WED AR+R L+  + ++K PGCS +E +S V  F+  D+ HP   +IY  
Sbjct: 508 LSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVVGDKFHPQNREIYGM 567

Query: 706 IDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKN 765
           ++E+ +L++EAG+VPD +  L  +EEE KE  L +HSEKLA+AFGL++   G  + I KN
Sbjct: 568 LEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKN 627

Query: 766 LRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           LRVC +CH A K +S +Y R I+ RD  RFHHF+ G CSC DYW
Sbjct: 628 LRVCRNCHEATKLLSKIYKREIVARDRTRFHHFRDGVCSCNDYW 671



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 137/483 (28%), Positives = 231/483 (47%), Gaps = 36/483 (7%)

Query: 83  LREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRL 142
           L  A  +F      N   W+++I G++     + +  L+  M   G  P+ YT   +L+ 
Sbjct: 14  LPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKS 73

Query: 143 CSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM------------------------- 177
           C+       G+Q HG  +K  FDL+ +V T L+ M                         
Sbjct: 74  CAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSY 133

Query: 178 ------YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV 231
                 YA    I  A+ LF   P  K+ V+W  MI+GY++ G   +A+E F +M    V
Sbjct: 134 TALITGYASRGDIRSAQKLFDEIP-VKDVVSWNAMISGYAETGCYKEALELFEEMMKMNV 192

Query: 232 ESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR 291
             ++ T+ ++L+ACA   + + G QVH  +   GF++N+ + +ALID+Y+KCG++++A  
Sbjct: 193 RPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACG 252

Query: 292 LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID 351
           L +     + +SWN++I G+     +KEAL LF++M       +D T  SVL   A    
Sbjct: 253 LFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGA 312

Query: 352 LNNAKSVHSLIVK--TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
           ++  + +H  I K   G      +  +LIDMYAK G+++ A  VFN M  K + SW ++I
Sbjct: 313 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMI 372

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
            G A HG  + +   FS MR  GI PD +    +LSAC+   +L+ G+ +     +    
Sbjct: 373 FGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKM 432

Query: 470 S-SLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYD 527
           +  L     ++ +    G   +A  + ++M    D + W +L+  C  +G  + A  F  
Sbjct: 433 TPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQ 492

Query: 528 QML 530
            ++
Sbjct: 493 NLI 495



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 134/441 (30%), Positives = 226/441 (51%), Gaps = 25/441 (5%)

Query: 52  IDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNY 111
           +++A ++F++ S RD  ++  +I  YA+ G +R A+KLF+E P K+  +W+++I GY+  
Sbjct: 115 LEDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAET 174

Query: 112 GLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV 171
           G   EA ELF +M     RP + T   VL  C+  G ++ G Q H +     FD N  +V
Sbjct: 175 GCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIV 234

Query: 172 TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV 231
             L+D+Y+KC  +  A  LF+     K+ ++W T+I GY+      +A+  F++M   G 
Sbjct: 235 NALIDLYSKCGEVETACGLFQGL-SYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE 293

Query: 232 ESNQFTFPSILTACAAVSARDFGAQVHGCILS--SGFEANVYVQSALIDMYAKCGDLDSA 289
             N  T  S+L ACA + A D G  +H  I     G      ++++LIDMYAKCGD+++A
Sbjct: 294 TPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAA 353

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
            ++       +  SWN+MI GFA  G    +  LF +M    I+ DD T+  +L+  + +
Sbjct: 354 HQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHS 413

Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNN-----ALIDMYAKQGNLDCAFMVFNLMQ-DKDVI 403
             L+  +     I ++  + YK          +ID+    G    A  + N M+ + D +
Sbjct: 414 GMLDLGRH----IFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGV 469

Query: 404 SWTSLITGCAYHGSYEEALKYFSDM-RISGICP-DHVVVSSILSAC------AELTVLEF 455
            W SL+  C  HG+ E A  +  ++ +I    P  ++++S+I ++       A +  L  
Sbjct: 470 IWCSLLKACKMHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLN 529

Query: 456 GQQVHAVFLKSGGCSSLSVDN 476
           G+ +  V     GCSS+ VD+
Sbjct: 530 GKCMKKV----PGCSSIEVDS 546



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 179/367 (48%), Gaps = 33/367 (8%)

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           L  A  + E  +  N++ WN+MI G A       +L+L+  M +  +  + +T+P +L  
Sbjct: 14  LPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKS 73

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
            A +      + +H  ++K GF+   +V+ +LI MY +   L+ A+ VF+    +DV+S+
Sbjct: 74  CAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSY 133

Query: 406 TSLITGCAYHGS-------------------------------YEEALKYFSDMRISGIC 434
           T+LITG A  G                                Y+EAL+ F +M    + 
Sbjct: 134 TALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVR 193

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           PD     ++LSACA    +E G+QVH+     G  S+L + N+L+ +Y+KCG +  A  +
Sbjct: 194 PDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGL 253

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
           F  +  +DVI+W  LI G       KEAL  + +ML  G  P+ +T + +L AC+H G  
Sbjct: 254 FQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAI 313

Query: 555 ENARWYFESMDK-VYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
           +  RW    +DK + G+         +ID+  + G +  A  + + M+ +  ++ W A++
Sbjct: 314 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSS-WNAMI 372

Query: 614 SACRVHG 620
               +HG
Sbjct: 373 FGFAMHG 379



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 120/280 (42%), Gaps = 39/280 (13%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           AL+D +S  GE++ A  LF+ +S +D  +WNT+I  Y +    +EA  LF E        
Sbjct: 236 ALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQE-------- 287

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
                                  M   G  P+  T+ +VL  C+  G +  G   H Y  
Sbjct: 288 -----------------------MLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYID 324

Query: 161 KTCFDLN--AFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFK 218
           K    +   + + T L+DMYAKC  I  A  +F      K+  +W  MI G++ +G    
Sbjct: 325 KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLH-KSLSSWNAMIFGFAMHGRADA 383

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ--SAL 276
           + + F  MR  G+E +  TF  +L+AC+     D G  +    ++  ++    ++    +
Sbjct: 384 SFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRS-MTQDYKMTPKLEHYGCM 442

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNE-VSWNSMIVGFARQG 315
           ID+    G    A  ++   E++ + V W S++      G
Sbjct: 443 IDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHG 482


>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
 gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
          Length = 802

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 264/712 (37%), Positives = 396/712 (55%), Gaps = 75/712 (10%)

Query: 172 TGLVDMYAKCKCIFEAEYLFKMFPDGK-NHVAWTTMITGYSQNGYGFKAIECFRDMRVEG 230
           T LV  YA    +  A   F   P  + + V    +I+ Y++  +   A+  FR +   G
Sbjct: 92  TSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151

Query: 231 -VESNQFTFPSILTACAA---VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC--- 283
            +  + ++F ++L+A      +S R   AQ+   +L SG    + V +AL+ +Y KC   
Sbjct: 152 SLRPDDYSFTALLSAAGHLPNISVRHC-AQLQCSVLKSGAGGVLSVSNALVALYMKCEAL 210

Query: 284 -------------------------------GDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
                                          GD+ +AR + E  ++  +V WN+MI G+ 
Sbjct: 211 EATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYV 270

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK--TGF--E 368
             G   EA  LF++M    + +D+FT+ SVL+  A+     + KSVH  I +    F  E
Sbjct: 271 HSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPE 330

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA--------------- 413
               VNNAL+ +Y+K GN+  A  +F+ M+ KDV+SW ++++G                 
Sbjct: 331 AALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEM 390

Query: 414 ---------------YHGSY-EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
                           HG + E+ALK F+ MR   + P     +  +SAC EL  L+ G+
Sbjct: 391 PYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGK 450

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
           Q+H   ++ G   S S  N+L+ +YA+CG + +AN +F  M   D ++W A+I    Q+G
Sbjct: 451 QLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHG 510

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY 577
            G+EAL+ +D+M+A G  PD I+F+ +L AC+H+GL +    YFESM + +GI PG DHY
Sbjct: 511 HGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHY 570

Query: 578 ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEP 637
             +IDLLGR+G++ EA+ L+  M  EP  ++W+A+LS CR  GD+ELG  AA+ LF++ P
Sbjct: 571 TRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTP 630

Query: 638 MNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHP 697
            +   Y+ LSN YS AG+W DAARVRKLM+ RG++KEPGCSW+E  ++VH+F+  D  HP
Sbjct: 631 QHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDTKHP 690

Query: 698 LRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQG 757
               +Y  ++ +   +++ GYVPD    LH++E   KE  L  HSE+LAV FGLL LP G
Sbjct: 691 EAHKVYKFLEMVGARMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLKLPPG 750

Query: 758 APIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           A + + KNLR+C DCH  M ++S    R I++RD  RFHHFK G CSCG+YW
Sbjct: 751 ATVTVLKNLRICDDCHAVMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 163/599 (27%), Positives = 258/599 (43%), Gaps = 103/599 (17%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP--FKNFFTWSS 103
           ++ SG++  A  LF   +D       +++AAYA +GRL  A   F+  P   ++    ++
Sbjct: 69  YTLSGDLPAAATLFR--ADPCPVAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNA 126

Query: 104 LIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT 162
           +I  Y+       A  +F  +   G  RP  Y         S   LL         +++ 
Sbjct: 127 VISAYARASHAAPAVAVFRSLLASGSLRPDDY---------SFTALLSAAGHLPNISVRH 177

Query: 163 CFDLNAFVV-----------TGLVDMYAKCKCI---FEAEYLFKMFPDGKNHVAWTT--- 205
           C  L   V+             LV +Y KC+ +    +A  +    PD K+ + WTT   
Sbjct: 178 CAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPD-KDALTWTTMVV 236

Query: 206 ----------------------------MITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
                                       MI+GY  +G   +A E FR M +E V  ++FT
Sbjct: 237 GYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFT 296

Query: 238 FPSILTACAAVSARDFGAQVHGCI--LSSGF--EANVYVQSALIDMYAKCGDLDSARRL- 292
           F S+L+ACA       G  VHG I  L   F  EA + V +AL+ +Y+KCG++  ARR+ 
Sbjct: 297 FTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIF 356

Query: 293 ------------------LEYSEID------------NEVSWNSMIVGFARQGFHKEALS 322
                             +E S +D            NE+SW  M+ G+   GF ++AL 
Sbjct: 357 DNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALK 416

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYA 382
           LF +M A D+K  D+TY   ++       L + K +H  +V+ GFEG     NALI MYA
Sbjct: 417 LFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYA 476

Query: 383 KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
           + G +  A ++F +M + D +SW ++I+    HG   EAL+ F  M   GI PD +   +
Sbjct: 477 RCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLT 536

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGG-CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR 501
           +L+AC    +++ G Q      +  G          L+ +  + G I +A  +  +M   
Sbjct: 537 VLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFE 596

Query: 502 DVIT-WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW 559
              + W A++ GC  +G  +      DQ+     + D  T++ L    S AG     RW
Sbjct: 597 PTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDG-TYILLSNTYSAAG-----RW 649



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 147/283 (51%), Gaps = 4/283 (1%)

Query: 36  ASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP 94
           A  +N ALV  +S  G I  A ++F+ M  +D  +WNT+++ Y  S  L +A ++F E P
Sbjct: 332 ALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMP 391

Query: 95  FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ 154
           +KN  +W  ++ GY + G   +A +LF +M+ E  +P  YT    +  C   G L+ G+Q
Sbjct: 392 YKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQ 451

Query: 155 FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
            HG+ ++  F+ +      L+ MYA+C  + EA  +F + P+  + V+W  MI+   Q+G
Sbjct: 452 LHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPN-IDSVSWNAMISALGQHG 510

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQ 273
           +G +A+E F  M  EG+  ++ +F ++LTAC      D G Q    +    G        
Sbjct: 511 HGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHY 570

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIVGFARQG 315
           + LID+  + G +  AR L++    +   S W +++ G    G
Sbjct: 571 TRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSG 613


>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g24000, mitochondrial-like [Cucumis sativus]
          Length = 677

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 242/579 (41%), Positives = 368/579 (63%), Gaps = 2/579 (0%)

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           +E  +  +  +L  C  +     G  +H  I SS FE ++ + + +++MYAKCG L+ A+
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
            L +     + VSW  +I G+++ G   EAL+LF KM     + ++FT  S+L    +  
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
             ++ + +H+  +K G++    V ++L+DMYA+  ++  A ++FN +  K+V+SW +LI 
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
           G A  G  E  ++ F  M   G  P H   SS+L ACA    LE G+ VHA  +KSGG  
Sbjct: 281 GHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQP 339

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
              + N+L+ +YAK G I DA +VF  +  +D+++W ++I G AQ+G G EALQ ++QML
Sbjct: 340 IAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQML 399

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKL 590
               +P+ ITF+ +L ACSH+GL +  ++YFE M K + I+    H+  ++DLLGR+G+L
Sbjct: 400 KAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKK-HKIEAQVAHHVTVVDLLGRAGRL 458

Query: 591 IEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMY 650
            EA   +++M  +P A VW ALL ACR+H +++LG  AA  +FEL+P ++ P+V LSN+Y
Sbjct: 459 NEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIY 518

Query: 651 STAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIM 710
           ++AG+  DAA+VRK+MK  G++KEP CSWVE  ++VH+F++ D  HP+R +I    ++I 
Sbjct: 519 ASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKIS 578

Query: 711 LLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCG 770
             IKE GYVPD +  L  + ++ +E+ L YHSEKLA+AF +L  P G  IRI KN+R+CG
Sbjct: 579 GKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGLTIRIKKNIRICG 638

Query: 771 DCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           DCH+A K+ S V  R II+RD+NRFHHF  G CSC DYW
Sbjct: 639 DCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 677



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 125/384 (32%), Positives = 210/384 (54%), Gaps = 3/384 (0%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P +     +L  C+    L++G   H +   + F+ +  ++  +++MYAKC  + EA+ L
Sbjct: 103 PERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDL 162

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P  K+ V+WT +I+GYSQ+G   +A+  F  M   G + N+FT  S+L A     +
Sbjct: 163 FDKMPT-KDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPS 221

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              G Q+H   L  G++ NV+V S+L+DMYA+   +  A+ +       N VSWN++I G
Sbjct: 222 DHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAG 281

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
            AR+G  +  + LF +M  +  +   FTY SVL C AS+  L   K VH+ ++K+G +  
Sbjct: 282 HARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLAC-ASSGSLEQGKWVHAHVIKSGGQPI 340

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
            ++ N LIDMYAK G++  A  VF  +  +D++SW S+I+G A HG   EAL+ F  M  
Sbjct: 341 AYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLK 400

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
           + + P+ +   S+L+AC+   +L+ GQ    +  K    + ++   ++V +  + G +N+
Sbjct: 401 AKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNE 460

Query: 491 ANRVFDSMHTRDV-ITWTALIMGC 513
           AN+  + M  +     W AL+  C
Sbjct: 461 ANKFIEEMPIKPTAAVWGALLGAC 484



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 214/419 (51%), Gaps = 19/419 (4%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++  YA  G L EA+ LF++ P K+  +W+ LI GYS  G   EA  LF +M   G++
Sbjct: 144 NFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQ 203

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+++TL ++L+          G Q H +++K  +D+N  V + L+DMYA+   + EA+ +
Sbjct: 204 PNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVI 263

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F      KN V+W  +I G+++ G G   +  F  M  +G E   FT+ S+L ACA+  +
Sbjct: 264 FNSLA-AKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGS 321

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            + G  VH  ++ SG +   Y+ + LIDMYAK G +  A+++       + VSWNS+I G
Sbjct: 322 LEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISG 381

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           +A+ G   EAL LF++M    ++ ++ T+ SVL   + +  L+  +    L+ K   E  
Sbjct: 382 YAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQ 441

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYH-----GSYEEALKY 424
              +  ++D+  + G L+ A      M  K   + W +L+  C  H     G Y     +
Sbjct: 442 VAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIF 501

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG-----GCSSLSVDNSL 478
             D   SG    HV++S+I ++   L+      +V  +  +SG      CS + ++N +
Sbjct: 502 ELDPHDSG---PHVLLSNIYASAGRLSD---AAKVRKMMKESGVKKEPACSWVEIENEV 554


>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 259/746 (34%), Positives = 424/746 (56%), Gaps = 10/746 (1%)

Query: 72  TMIAAYANSGRLREAKKL-FNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ----MQL 126
           T IA+ + S + R+ K L F  +     F+    I      G   EA +   +    + L
Sbjct: 40  TPIASLSLSAQTRQTKSLSFANSSTNRQFSSLHEIKKLCESGNLKEALDFLQRESDDVVL 99

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV-TGLVDMYAKCKCIF 185
           +  + S+  +  +L+ C  +  ++ G + H     +    N FV+ T ++ MY+ C    
Sbjct: 100 DSAQRSE-AMGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPS 158

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILTA 244
           ++  +F      KN   W  +++ Y++N     A+  F ++  V   + + FT P ++ A
Sbjct: 159 DSRMVFDKLRR-KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKA 217

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA-RRLLEYSEIDNEVS 303
           CA +     G  +HG        ++V+V +ALI MY KCG ++ A +R+ +  +     S
Sbjct: 218 CAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSS 277

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN+++ G+A+    ++AL L+ +M    +  D FT  S+L   +    L+  + +H   +
Sbjct: 278 WNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFAL 337

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           + G     F+  +L+ +Y   G    A ++F+ M+ + ++SW  +I G + +G  +EA+ 
Sbjct: 338 RNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAIN 397

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            F  M   GI P  + +  +  AC++L+ L  G+++H   LK+     + V +S++ +YA
Sbjct: 398 LFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYA 457

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           K GCI  + R+FD +  +DV +W  +I G   +G+GKEAL+ +++ML  G KPD  TF G
Sbjct: 458 KGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTG 517

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           +L ACSHAGL E+   YF  M  ++ I+P  +HY C++D+LGR+G++ +A  L+++M G+
Sbjct: 518 ILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGD 577

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
           PD+ +W +LLS+CR+HG+L LGE+ AN L ELEP     YV +SN+++ +GKW+D  RVR
Sbjct: 578 PDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVR 637

Query: 664 KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMN 723
             MK  G++K+ GCSW+E   +VH F+  D   P   ++      + + I   GY PD  
Sbjct: 638 GRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTG 697

Query: 724 FALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVY 783
             LH++EEE K   L  HSEKLA++FGLL   +G P+R++KNLR+CGDCH A K+IS V 
Sbjct: 698 SVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVV 757

Query: 784 LRHIILRDSNRFHHFKAGNCSCGDYW 809
            R I++RD+ RFHHF+ G CSCGDYW
Sbjct: 758 NRDIVVRDNKRFHHFRDGICSCGDYW 783



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 242/487 (49%), Gaps = 5/487 (1%)

Query: 68  FTWNT-MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM-Q 125
           F  NT +I  Y+  G   +++ +F++   KN F W++++  Y+   L  +A  +F ++  
Sbjct: 141 FVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELIS 200

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           +  ++P  +TL  V++ C+    L  G+  HG A K     + FV   L+ MY KC  + 
Sbjct: 201 VTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVE 260

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           EA        D K   +W  ++ GY+QN    KA++ +  M   G++ + FT  S+L AC
Sbjct: 261 EAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLAC 320

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           + + +  +G ++HG  L +G   + ++  +L+ +Y  CG   +A+ L +  E  + VSWN
Sbjct: 321 SRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWN 380

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
            MI G+++ G   EA++LF++M +  I+  +     V    +    L   K +H   +K 
Sbjct: 381 VMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKA 440

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
                 FV++++IDMYAK G +  +  +F+ +++KDV SW  +I G   HG  +EAL+ F
Sbjct: 441 HLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELF 500

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAK 484
             M   G+ PD    + IL AC+   ++E G +     L        L     +V +  +
Sbjct: 501 EKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGR 560

Query: 485 CGCINDANRVFDSMH-TRDVITWTALIMGCAQNGKGKEALQFYDQMLA-RGTKPDYITFV 542
            G I+DA R+ + M    D   W++L+  C  +G      +  +++L     KP+    +
Sbjct: 561 AGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLI 620

Query: 543 GLLFACS 549
             LFA S
Sbjct: 621 SNLFAGS 627



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 127/245 (51%), Gaps = 3/245 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F   ++++ Y   G+   A+ LF+    ++  +W+ +I GYS  GL  EA  LF QM 
Sbjct: 344 DPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQML 403

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            +G +P +  +  V   CS    L+ G++ H +A+K     + FV + ++DMYAK  CI 
Sbjct: 404 SDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIG 463

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            ++ +F    + K+  +W  +I GY  +G G +A+E F  M   G++ + FTF  IL AC
Sbjct: 464 LSQRIFDRLRE-KDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMAC 522

Query: 246 AAVSARDFGAQVHGCILS-SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS- 303
           +     + G +    +L+    E  +   + ++DM  + G +D A RL+E    D +   
Sbjct: 523 SHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRI 582

Query: 304 WNSMI 308
           W+S++
Sbjct: 583 WSSLL 587



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 39/178 (21%), Positives = 76/178 (42%), Gaps = 33/178 (18%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           ++ +++D ++  G I  + ++F+++ ++D  +WN +IA Y   GR +             
Sbjct: 448 VSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGK------------- 494

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG-EQFH 156
                             EA ELF +M   G +P  +T   +L  CS  GL++ G E F+
Sbjct: 495 ------------------EALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFN 536

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
                   +      T +VDM  +   I +A  L +  P   +   W+++++    +G
Sbjct: 537 QMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHG 594


>gi|224140235|ref|XP_002323489.1| predicted protein [Populus trichocarpa]
 gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 276/781 (35%), Positives = 429/781 (54%), Gaps = 38/781 (4%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D    N +IAAY   G + +A ++F      +  ++S+LI  +S    + EA +LF++M+
Sbjct: 136 DTHLGNAVIAAYIKLGLVVDAYEVFMGMSTPDVVSYSALISSFSKLNRETEAIQLFFRMR 195

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           + G  P++Y+   +L  C     L+ G Q H  AIK  +    FV   L+ +Y KC C+ 
Sbjct: 196 ISGIEPNEYSFVAILTACIRSLELEMGLQVHALAIKLGYSQLVFVANALIGLYGKCGCLD 255

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILTA 244
            A +LF   P  ++  +W TMI+   +     KA+E FR + + +G +++QFT  ++LTA
Sbjct: 256 HAIHLFDEMPQ-RDIASWNTMISSLVKGLSYEKALELFRVLNQNKGFKADQFTLSTLLTA 314

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL------------ 292
           CA   AR  G ++H   +  G E N+ V +A+I  Y +CG L+    L            
Sbjct: 315 CARCHARIQGREIHAYAIRIGLENNLSVSNAIIGFYTRCGSLNHVAALFERMPVRDIITW 374

Query: 293 -------LEYSEID------------NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
                  +E+  +D            N VS+N+++ GF +     +AL+LF +M     +
Sbjct: 375 TEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFCKNNEGLKALNLFVRMVQEGAE 434

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
           + DFT   V+N     + L  ++ +H  I+K GF     +  ALIDM +K G +D A  +
Sbjct: 435 LTDFTLTGVINACGLLLKLEISRQIHGFIIKFGFRSNACIEAALIDMCSKCGRMDDADRM 494

Query: 394 FNLMQDK--DVISWTSLITGCAYHGSYEEALKYFSDMRISG-ICPDHVVVSSILSACAEL 450
           F  +     + I  TS+I G A +G  EEA+  F   +  G +  D V  +SIL  C  L
Sbjct: 495 FQSLSTDGGNSIIQTSMICGYARNGLPEEAICLFYRCQSEGTMVLDEVAFTSILGVCGTL 554

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
              E G+Q+H   LK+G  + L V NS++ +Y+KC  I+DA + F++M   DV++W  LI
Sbjct: 555 GFHEVGKQIHCQALKTGFHAELGVGNSIISMYSKCYNIDDAIKAFNTMPGHDVVSWNGLI 614

Query: 511 MGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL--FACSHAGLAENARWYFESMDKVY 568
            G   + +G EAL  +  M   G KPD ITFV ++  +  + + L +  R  F SM  ++
Sbjct: 615 AGQLLHRQGDEALAIWSSMEKAGIKPDAITFVLIVSAYKFTSSNLLDECRSLFLSMKMIH 674

Query: 569 GIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
            ++P  +HYA ++ +LG  G L EA+ L+++M  +P+ +VW+ALL  CR+H +  +G+R 
Sbjct: 675 DLEPTSEHYASLVGVLGYWGLLEEAEELINKMPFDPEVSVWRALLDGCRLHANTSIGKRV 734

Query: 629 ANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHI 688
           A ++  +EP +   YV +SN+Y+ +G+W  +  VR+ M+ RG+RK P  SWV    Q+H 
Sbjct: 735 AKHIIGMEPRDPSTYVLVSNLYAASGRWHCSEMVRENMRDRGLRKHPCRSWVIIKKQLHT 794

Query: 689 FISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVA 748
           F + D+ HP   DIYS +D ++L   +AGY PDM+F L  VEE+ K+  L YHS KLA  
Sbjct: 795 FYARDKSHPQSNDIYSGLDILILKCLKAGYEPDMSFVLQEVEEQQKKDFLFYHSAKLAAT 854

Query: 749 FGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDY 808
           +GLL    G PIR+ KN+ +C DCHT +KY + V  R II RD++ FH F  G CSC  Y
Sbjct: 855 YGLLKTRPGEPIRVVKNILLCRDCHTFLKYATVVTQREIIFRDASGFHCFSNGQCSCKGY 914

Query: 809 W 809
           W
Sbjct: 915 W 915



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 161/561 (28%), Positives = 243/561 (43%), Gaps = 83/561 (14%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +   G +D A  LF++M  RD  +WNTMI                           SSL+
Sbjct: 248 YGKCGCLDHAIHLFDEMPQRDIASWNTMI---------------------------SSLV 280

Query: 106 YGYSNYGLDIEAFELFWQM-QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCF 164
            G S      +A ELF  + Q +G++  Q+TL  +L  C+      +G + H YAI+   
Sbjct: 281 KGLSYE----KALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGREIHAYAIRIGL 336

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP----------------------------- 195
           + N  V   ++  Y +C  +     LF+  P                             
Sbjct: 337 ENNLSVSNAIIGFYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNK 396

Query: 196 -DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
              KN V++  ++TG+ +N  G KA+  F  M  EG E   FT   ++ AC  +   +  
Sbjct: 397 MPEKNSVSYNALLTGFCKNNEGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEIS 456

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID--NEVSWNSMIVGFA 312
            Q+HG I+  GF +N  +++ALIDM +KCG +D A R+ +    D  N +   SMI G+A
Sbjct: 457 RQIHGFIIKFGFRSNACIEAALIDMCSKCGRMDDADRMFQSLSTDGGNSIIQTSMICGYA 516

Query: 313 RQGFHKEALSLFKKMHAR-DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
           R G  +EA+ LF +  +   + +D+  + S+L    +       K +H   +KTGF    
Sbjct: 517 RNGLPEEAICLFYRCQSEGTMVLDEVAFTSILGVCGTLGFHEVGKQIHCQALKTGFHAEL 576

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
            V N++I MY+K  N+D A   FN M   DV+SW  LI G   H   +EAL  +S M  +
Sbjct: 577 GVGNSIISMYSKCYNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQGDEALAIWSSMEKA 636

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN----SLVLVYAKCGC 487
           GI PD +    I+SA  + T      +  ++FL       L   +    SLV V    G 
Sbjct: 637 GIKPDAITFVLIVSA-YKFTSSNLLDECRSLFLSMKMIHDLEPTSEHYASLVGVLGYWGL 695

Query: 488 INDANRVFDSM-HTRDVITWTALIMGC---AQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           + +A  + + M    +V  W AL+ GC   A    GK   +    M  R   P     V 
Sbjct: 696 LEEAEELINKMPFDPEVSVWRALLDGCRLHANTSIGKRVAKHIIGMEPR--DPSTYVLVS 753

Query: 544 LLFACSHAGLAENARWYFESM 564
            L+A S        RW+   M
Sbjct: 754 NLYAAS-------GRWHCSEM 767



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 127/419 (30%), Positives = 213/419 (50%), Gaps = 11/419 (2%)

Query: 8   ILNFSLRCRSKIIGPARYTHNVGNSVKPASDLNRALVDF-SNSGEIDEAGQLFEKMSDRD 66
           +L    RC ++I G   + + +   ++    ++ A++ F +  G ++    LFE+M  RD
Sbjct: 311 LLTACARCHARIQGREIHAYAIRIGLENNLSVSNAIIGFYTRCGSLNHVAALFERMPVRD 370

Query: 67  GFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL 126
             TW  MI AY   G +  A  +FN+ P KN  ++++L+ G+      ++A  LF +M  
Sbjct: 371 IITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFCKNNEGLKALNLFVRMVQ 430

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
           EG   + +TL  V+  C L   L+   Q HG+ IK  F  NA +   L+DM +KC  + +
Sbjct: 431 EGAELTDFTLTGVINACGLLLKLEISRQIHGFIIKFGFRSNACIEAALIDMCSKCGRMDD 490

Query: 187 AEYLFK-MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES-NQFTFPSILTA 244
           A+ +F+ +  DG N +  T+MI GY++NG   +AI  F   + EG    ++  F SIL  
Sbjct: 491 ADRMFQSLSTDGGNSIIQTSMICGYARNGLPEEAICLFYRCQSEGTMVLDEVAFTSILGV 550

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C  +   + G Q+H   L +GF A + V +++I MY+KC ++D A +        + VSW
Sbjct: 551 CGTLGFHEVGKQIHCQALKTGFHAELGVGNSIISMYSKCYNIDDAIKAFNTMPGHDVVSW 610

Query: 305 NSMIVG--FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC--FASNIDLNNAKSVH- 359
           N +I G    RQG   EAL+++  M    IK D  T+  +++   F S+  L+  +S+  
Sbjct: 611 NGLIAGQLLHRQG--DEALAIWSSMEKAGIKPDAITFVLIVSAYKFTSSNLLDECRSLFL 668

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGS 417
           S+ +    E       +L+ +    G L+ A  + N M  D +V  W +L+ GC  H +
Sbjct: 669 SMKMIHDLEPTSEHYASLVGVLGYWGLLEEAEELINKMPFDPEVSVWRALLDGCRLHAN 727



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 185/381 (48%), Gaps = 35/381 (9%)

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
           D    +H  IL  G   + ++ +A+I  Y K G +  A  +       + VS++++I  F
Sbjct: 121 DLARALHASILKLG--EDTHLGNAVIAAYIKLGLVVDAYEVFMGMSTPDVVSYSALISSF 178

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
           ++     EA+ LF +M    I+ +++++ ++L     +++L     VH+L +K G+    
Sbjct: 179 SKLNRETEAIQLFFRMRISGIEPNEYSFVAILTACIRSLELEMGLQVHALAIKLGYSQLV 238

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM-RI 430
           FV NALI +Y K G LD A  +F+ M  +D+ SW ++I+      SYE+AL+ F  + + 
Sbjct: 239 FVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSLVKGLSYEKALELFRVLNQN 298

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
            G   D   +S++L+ACA       G+++HA  ++ G  ++LSV N+++  Y +CG +N 
Sbjct: 299 KGFKADQFTLSTLLTACARCHARIQGREIHAYAIRIGLENNLSVSNAIIGFYTRCGSLNH 358

Query: 491 ANRVFDSMHTRDVITWT-------------------------------ALIMGCAQNGKG 519
              +F+ M  RD+ITWT                               AL+ G  +N +G
Sbjct: 359 VAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSVSYNALLTGFCKNNEG 418

Query: 520 KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC 579
            +AL  + +M+  G +    T  G++ AC      E +R     + K +G +      A 
Sbjct: 419 LKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQIHGFIIK-FGFRSNACIEAA 477

Query: 580 MIDLLGRSGKLIEAKALLDQM 600
           +ID+  + G++ +A  +   +
Sbjct: 478 LIDMCSKCGRMDDADRMFQSL 498



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 152/304 (50%), Gaps = 7/304 (2%)

Query: 332 IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
           I++DD      L+   ++IDL  A+++H+ I+K G + +  + NA+I  Y K G +  A+
Sbjct: 102 IEVDDLFNLLRLSVKYTDIDL--ARALHASILKLGEDTH--LGNAVIAAYIKLGLVVDAY 157

Query: 392 MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELT 451
            VF  M   DV+S+++LI+  +      EA++ F  MRISGI P+     +IL+AC    
Sbjct: 158 EVFMGMSTPDVVSYSALISSFSKLNRETEAIQLFFRMRISGIEPNEYSFVAILTACIRSL 217

Query: 452 VLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIM 511
            LE G QVHA+ +K G    + V N+L+ +Y KCGC++ A  +FD M  RD+ +W  +I 
Sbjct: 218 ELEMGLQVHALAIKLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMIS 277

Query: 512 GCAQNGKGKEALQFYDQM-LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGI 570
              +    ++AL+ +  +   +G K D  T   LL AC+        R       ++ G+
Sbjct: 278 SLVKGLSYEKALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGREIHAYAIRI-GL 336

Query: 571 KPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAAN 630
           +        +I    R G L    AL ++M    D   W  +++A    G ++L     N
Sbjct: 337 ENNLSVSNAIIGFYTRCGSLNHVAALFERMPVR-DIITWTEMITAYMEFGLVDLAVDMFN 395

Query: 631 NLFE 634
            + E
Sbjct: 396 KMPE 399


>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
 gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
          Length = 716

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 266/721 (36%), Positives = 421/721 (58%), Gaps = 20/721 (2%)

Query: 104 LIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC 163
           +I      G  ++A EL+ +M+  G    ++ + +++  C+    L+ G + H + I T 
Sbjct: 1   MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
           F  +  + T L+ MYAKC  + +A+ +F+   + K+  AW+++I  Y++ G G  A+  +
Sbjct: 61  FRTDIPLETALLQMYAKCGSLDDAKRVFEGM-EIKDLFAWSSIIAAYARAGRGEMAVVLY 119

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
           R M  EGVE N  TF   L  CA+V+    G  +H  IL+S    +  +Q +L++MY KC
Sbjct: 120 RRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKC 179

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD-IKIDDFTYPSV 342
            ++  AR++ E  +  N  S+ +MI  + + G H EAL LF +M   + I+ + +T+ ++
Sbjct: 180 DEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATI 239

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV 402
           L       +L   + VH  +   GF+    V NAL+ MY K G+   A  VF+ M  ++V
Sbjct: 240 LGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNV 299

Query: 403 ISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAV 462
           ISWTS+I   A HG+ +EAL  F  M +    P  V  SS L+ACA L  L+ G+++H  
Sbjct: 300 ISWTSMIAAYAQHGNPQEALNLFKRMDVE---PSGVSFSSALNACALLGALDEGREIHHR 356

Query: 463 FLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEA 522
            +++   +S  ++ SL+ +YA+CG ++DA RVF+ M TRD  +  A+I    Q+G+ K+A
Sbjct: 357 VVEAN-LASPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQA 415

Query: 523 LQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMID 582
           L+ Y +M   G   D ITFV +L ACSH  L  + R + +S+   +G+ P  +HY CM+D
Sbjct: 416 LRIYRKMEQEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVD 475

Query: 583 LLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           +LGRSG+L +A+ L++ M  + DA  W  LLS C+ HGDL+ GERAA  +FEL P   +P
Sbjct: 476 VLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPAETLP 535

Query: 643 YVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDR-----GHP 697
           YV LSNMY+ A +++DA RVRK M+ RG+ +    S++E ++++H+F S  R     GH 
Sbjct: 536 YVFLSNMYAAAKRFDDARRVRKEMEERGVTRPVAVSYIEIDNELHMFTSGGRDEQQEGHD 595

Query: 698 LRT--DIYSKIDEIMLLIKEAGYVPDMNFALHNVE----EEGKEIGLAYHSEKLAVAFGL 751
            RT   + S + E++  +K+AGYVPD        +    EE K+  L +HSE+LA+A+GL
Sbjct: 596 GRTMERVRSLLVELLEPMKQAGYVPDTREVYLEQQGVTSEEEKQRSLCFHSERLAIAYGL 655

Query: 752 LTLP---QGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDY 808
           +         P+R+  + RVC  CH+A+K +S +  + I +RD +RFHHF+ G CSCGD+
Sbjct: 656 IAAKDPDDSRPLRVVNSHRVCSGCHSAIKLLSDITEKRIFVRDGSRFHHFEKGACSCGDH 715

Query: 809 W 809
           W
Sbjct: 716 W 716



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 151/509 (29%), Positives = 257/509 (50%), Gaps = 17/509 (3%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
             ++  YA  G L +AK++F     K+ F WSS+I  Y+  G    A  L+ +M  EG  
Sbjct: 69  TALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVE 128

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+  T    L  C+    L  G   H   + +    +  +   L++MY KC  + EA  +
Sbjct: 129 PNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKV 188

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILTACAAVS 249
           F+     +N  ++T MI+ Y Q G   +A+E F  M +VE +E N +TF +IL A   + 
Sbjct: 189 FEGM-KARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLG 247

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
             + G +VH  + S GF+ NV VQ+AL+ MY KCG    AR++ +     N +SW SMI 
Sbjct: 248 NLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIA 307

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
            +A+ G  +EAL+LFK+M   D++    ++ S LN  A    L+  + +H  +V+     
Sbjct: 308 AYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEANLAS 364

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
            + +  +L+ MYA+ G+LD A  VFN M+ +D  S  ++I     HG  ++AL+ +  M 
Sbjct: 365 PQ-METSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKME 423

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL--VYAKCGC 487
             GI  D +   S+L AC+  +++   +      +   G   L V++ L +  V  + G 
Sbjct: 424 QEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPL-VEHYLCMVDVLGRSGR 482

Query: 488 INDANRVFDSM-HTRDVITWTALIMGCAQNG---KGKEALQFYDQMLARGTKPDYITFVG 543
           + DA  + ++M +  D + W  L+ GC ++G   +G+ A +   ++    T P Y+ F+ 
Sbjct: 483 LGDAEELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPAETLP-YV-FLS 540

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKP 572
            ++A   A   ++AR   + M++    +P
Sbjct: 541 NMYAA--AKRFDDARRVRKEMEERGVTRP 567



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 73/181 (40%), Gaps = 54/181 (29%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++  G +D+A ++F +M  RD F+ N MIAA+   GR ++A +++               
Sbjct: 375 YARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYR-------------- 420

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                            +M+ EG      T  +VL  CS           H   +  C D
Sbjct: 421 -----------------KMEQEGIPADGITFVSVLVACS-----------HTSLVADCRD 452

Query: 166 -LNAFVVTG-----------LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQN 213
            L + V+             +VD+  +   + +AE L +  P   + VAW T+++G  ++
Sbjct: 453 FLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRH 512

Query: 214 G 214
           G
Sbjct: 513 G 513


>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 613

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 232/527 (44%), Positives = 335/527 (63%)

Query: 283 CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
           C  +  A ++    +  N  +WN+MI G+A       AL L+++MH   I+ D  TYP +
Sbjct: 87  CSPMSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFL 146

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV 402
           L   A  +D+   + VHS+ ++ GFE   FV N L+ MYA  G+ + A  +F LM ++++
Sbjct: 147 LKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNL 206

Query: 403 ISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAV 462
           ++W S+I G A +G   EAL  F +M + G+ PD   + S+LSACAEL  L  G++ H  
Sbjct: 207 VTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVY 266

Query: 463 FLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEA 522
            +K G   +L   N+L+ +YAKCG I  A++VFD M  + V++WT+LI+G A NG GKEA
Sbjct: 267 MVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEA 326

Query: 523 LQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMID 582
           L+ + ++  +G  P  ITFVG+L+ACSH G+ +    YF+ M + YGI P  +HY CM+D
Sbjct: 327 LELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVD 386

Query: 583 LLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           LLGR+G + +A   +  M  +P+A VW+ LL AC +HG L LGE A   L +LEP ++  
Sbjct: 387 LLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGD 446

Query: 643 YVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDI 702
           YV LSN+Y++  +W D  +VR+ M   G++K PG S VE  +++H F+  DR HP   +I
Sbjct: 447 YVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEI 506

Query: 703 YSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRI 762
           Y K+ EI  L+K  GYVP ++  L ++EEE KE  L+YHSEK+A+AF L+    G PIR+
Sbjct: 507 YVKLAEITKLLKLEGYVPHISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRV 566

Query: 763 FKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            KNLRVC DCH A+K IS V+ R I++RD +RFHHFK G+CSC DYW
Sbjct: 567 VKNLRVCADCHLAIKLISKVFDREIVVRDRSRFHHFKDGHCSCKDYW 613



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 116/371 (31%), Positives = 192/371 (51%), Gaps = 11/371 (2%)

Query: 154 QFHGYAIK-----TCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
           Q H ++I+     T  D+  +++  L+     C  +  A  +F    +  N   W TMI 
Sbjct: 58  QIHAFSIRHGVPLTNPDMGKYLIFTLLSF---CSPMSYAHQIFSQIQN-PNIFTWNTMIR 113

Query: 209 GYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEA 268
           GY+++     A+E +R M V  +E +  T+P +L A A +     G +VH   + +GFE+
Sbjct: 114 GYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFES 173

Query: 269 NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH 328
            V+VQ+ L+ MYA CG  +SA +L E     N V+WNS+I G+A  G   EAL+LF++M 
Sbjct: 174 LVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMG 233

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD 388
            R ++ D FT  S+L+  A    L   +  H  +VK G +G     NAL+D+YAK G++ 
Sbjct: 234 LRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIR 293

Query: 389 CAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
            A  VF+ M++K V+SWTSLI G A +G  +EAL+ F ++   G+ P  +    +L AC+
Sbjct: 294 QAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACS 353

Query: 449 ELTVLEFGQQVHAVFLKSGG-CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITW 506
              +++ G        +  G    +     +V +  + G +  A+    +M  + + + W
Sbjct: 354 HCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVW 413

Query: 507 TALIMGCAQNG 517
             L+  C  +G
Sbjct: 414 RTLLGACTIHG 424



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 185/365 (50%), Gaps = 27/365 (7%)

Query: 86  AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL 145
           A ++F++    N FTW+++I GY+     + A EL+ QM +    P  +T   +L+  + 
Sbjct: 93  AHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAK 152

Query: 146 KGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTT 205
              ++ GE+ H  AI+  F+   FV   LV MYA C     A  LF++  + +N V W +
Sbjct: 153 LMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAE-RNLVTWNS 211

Query: 206 MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
           +I GY+ NG   +A+  FR+M + GVE + FT  S+L+ACA + A   G + H  ++  G
Sbjct: 212 VINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVG 271

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
            + N++  +AL+D+YAKCG +  A ++ +  E  + VSW S+IVG A  GF KEAL LFK
Sbjct: 272 LDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFK 331

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN---------- 375
           ++  + +   + T+  VL   +           H  +V  GF+ +K +            
Sbjct: 332 ELERKGLMPSEITFVGVLYACS-----------HCGMVDEGFDYFKRMKEEYGIVPKIEH 380

Query: 376 --ALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
              ++D+  + G +  A   + N+    + + W +L+  C  HG    AL   +  ++  
Sbjct: 381 YGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHL--ALGEVARAQLLQ 438

Query: 433 ICPDH 437
           + P H
Sbjct: 439 LEPKH 443



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 129/260 (49%), Gaps = 8/260 (3%)

Query: 56  GQLFEKMSDRDGF-----TWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSN 110
           G+    ++ R+GF       NT++  YA  G    A KLF     +N  TW+S+I GY+ 
Sbjct: 159 GEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYAL 218

Query: 111 YGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV 170
            G   EA  LF +M L G  P  +T+ ++L  C+  G L  G + H Y +K   D N   
Sbjct: 219 NGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHA 278

Query: 171 VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG 230
              L+D+YAKC  I +A  +F    + K+ V+WT++I G + NG+G +A+E F+++  +G
Sbjct: 279 GNALLDLYAKCGSIRQAHKVFDEMEE-KSVVSWTSLIVGLAVNGFGKEALELFKELERKG 337

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSA 289
           +  ++ TF  +L AC+     D G      +    G    +     ++D+  + G +  A
Sbjct: 338 LMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQA 397

Query: 290 RRLLEYSEID-NEVSWNSMI 308
              ++   +  N V W +++
Sbjct: 398 HEFIQNMPMQPNAVVWRTLL 417



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 1/146 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++  YA  G +R+A K+F+E   K+  +W+SLI G +  G   EA ELF +++ +G  
Sbjct: 280 NALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLM 339

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG-LVDMYAKCKCIFEAEY 189
           PS+ T   VL  CS  G++  G  +     +    +      G +VD+  +   + +A  
Sbjct: 340 PSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHE 399

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGY 215
             +  P   N V W T++   + +G+
Sbjct: 400 FIQNMPMQPNAVVWRTLLGACTIHGH 425



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 63/120 (52%), Gaps = 6/120 (5%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF-- 98
           AL+D ++  G I +A ++F++M ++   +W ++I   A +G  +EA +LF E   K    
Sbjct: 281 ALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMP 340

Query: 99  --FTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
              T+  ++Y  S+ G+  E F+ F +M+ E G  P       ++ L    GL+++  +F
Sbjct: 341 SEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEF 400


>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 253/659 (38%), Positives = 386/659 (58%), Gaps = 4/659 (0%)

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
           +Q H   +      + F++T L+   +    I  A  +F   P  +    W  +I GYS+
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQI-FPWNAIIRGYSR 96

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYV 272
           N +   A+  + +M++  V  + FTFP +L AC+ +S    G  VH  +   GF+A+V+V
Sbjct: 97  NNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156

Query: 273 QSALIDMYAKCGDLDSARRLLEYSEIDNE--VSWNSMIVGFARQGFHKEALSLFKKMHAR 330
           Q+ LI +YAKC  L SAR + E   +     VSW +++  +A+ G   EAL +F  M   
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKM 216

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
           D+K D     SVLN F    DL   +S+H+ +VK G E    +  +L  MYAK G +  A
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
            ++F+ M+  ++I W ++I+G A +G   EA+  F +M    + PD + ++S +SACA++
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
             LE  + ++    +S     + + ++L+ ++AKCG +  A  VFD    RDV+ W+A+I
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396

Query: 511 MGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGI 570
           +G   +G+ +EA+  Y  M   G  P+ +TF+GLL AC+H+G+     W+F  M   + I
Sbjct: 397 VGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMAD-HKI 455

Query: 571 KPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAAN 630
            P   HYAC+IDLLGR+G L +A  ++  M  +P  TVW ALLSAC+ H  +ELGE AA 
Sbjct: 456 NPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQ 515

Query: 631 NLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFI 690
            LF ++P N   YVQLSN+Y+ A  W+  A VR  MK +G+ K+ GCSWVE   ++  F 
Sbjct: 516 QLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFR 575

Query: 691 SEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFG 750
             D+ HP   +I  +++ I   +KE G+V + + +LH++ +E  E  L  HSE++A+A+G
Sbjct: 576 VGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYG 635

Query: 751 LLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           L++ PQG P+RI KNLR C +CH A K IS +  R I++RD+NRFHHFK G CSCGDYW
Sbjct: 636 LISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 231/452 (51%), Gaps = 2/452 (0%)

Query: 67  GFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL 126
           GF    +I A ++ G +  A+++F++ P    F W+++I GYS      +A  ++  MQL
Sbjct: 53  GFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQL 112

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
               P  +T  ++L+ CS    LQ G   H    +  FD + FV  GL+ +YAKC+ +  
Sbjct: 113 ARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGS 172

Query: 187 AEYLFKMFP-DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           A  +F+  P   +  V+WT +++ Y+QNG   +A+E F  MR   V+ +     S+L A 
Sbjct: 173 ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAF 232

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
             +     G  +H  ++  G E    +  +L  MYAKCG + +A+ L +  +  N + WN
Sbjct: 233 TCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWN 292

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +MI G+A+ G+ +EA+ +F +M  +D++ D  +  S ++  A    L  A+S++  + ++
Sbjct: 293 AMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS 352

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
            +    F+++ALIDM+AK G+++ A +VF+   D+DV+ W+++I G   HG   EA+  +
Sbjct: 353 DYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLY 412

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             M   G+ P+ V    +L AC    ++  G     +               ++ +  + 
Sbjct: 413 RAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMADHKINPQQQHYACVIDLLGRA 472

Query: 486 GCINDANRVFDSMHTRDVIT-WTALIMGCAQN 516
           G ++ A  V   M  +  +T W AL+  C ++
Sbjct: 473 GHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 133/466 (28%), Positives = 220/466 (47%), Gaps = 45/466 (9%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF--KNFFTWSSLIYGYSNYGL 113
            Q+F    D D F  N +IA YA   RL  A+ +F   P   +   +W++++  Y+  G 
Sbjct: 143 AQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE 202

Query: 114 DIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG 173
            +EA E+F  M+    +P    L +VL   +    L++G   H   +K   ++   ++  
Sbjct: 203 PMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS 262

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
           L  MYAKC  +  A+ LF       N + W  MI+GY++NGY  +AI+ F +M  + V  
Sbjct: 263 LNTMYAKCGQVATAKILFDKM-KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
           +  +  S ++ACA V + +    ++  +  S +  +V++ SALIDM+AKCG ++ AR + 
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
           + +   + V W++MIVG+   G  +EA+SL++ M    +  +D T+  +L   A N    
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL--MACN---- 435

Query: 354 NAKSVHSLIVKTGFEGYKFVNN-----------ALIDMYAKQGNLDCAFMVFNLMQ-DKD 401
                HS +V+ G+  +  + +            +ID+  + G+LD A+ V   M     
Sbjct: 436 -----HSGMVREGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG 490

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPD---HVVVSSILSACAEL--TVLEFG 456
           V  W +L++ C  H   E  L  ++  ++  I P    H V  S L A A L   V E  
Sbjct: 491 VTVWGALLSACKKHRHVE--LGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVR 548

Query: 457 QQVHAVFL-KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR 501
            ++    L K  GCS + V   L           +A RV D  H R
Sbjct: 549 VRMKEKGLNKDVGCSWVEVRGRL-----------EAFRVGDKSHPR 583



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 112/264 (42%), Gaps = 33/264 (12%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++  G++  A  LF+KM   +   WN MI+ YA +G  REA  +F+E   K+        
Sbjct: 267 YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDV------- 319

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                                   RP   ++ + +  C+  G L++    + Y  ++ + 
Sbjct: 320 ------------------------RPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR 355

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            + F+ + L+DM+AKC  +  A  +F    D ++ V W+ MI GY  +G   +AI  +R 
Sbjct: 356 DDVFISSALIDMFAKCGSVEGARLVFDRTLD-RDVVVWSAMIVGYGLHGRAREAISLYRA 414

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M   GV  N  TF  +L AC        G      +            + +ID+  + G 
Sbjct: 415 MERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMADHKINPQQQHYACVIDLLGRAGH 474

Query: 286 LDSARRLLEYSEIDNEVS-WNSMI 308
           LD A  +++   +   V+ W +++
Sbjct: 475 LDQAYEVIKCMPVQPGVTVWGALL 498



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/186 (19%), Positives = 80/186 (43%), Gaps = 5/186 (2%)

Query: 29  VGNSVKPAS-DLNRALVDFSNSGEIDEAGQLFEKMSDRD----GFTWNTMIAAYANSGRL 83
           +   V+P +  +  A+   +  G +++A  ++E +   D     F  + +I  +A  G +
Sbjct: 315 INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSV 374

Query: 84  REAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLC 143
             A+ +F+ T  ++   WS++I GY  +G   EA  L+  M+  G  P+  T   +L  C
Sbjct: 375 EGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMAC 434

Query: 144 SLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAW 203
           +  G+++ G  F         +        ++D+  +   + +A  + K  P       W
Sbjct: 435 NHSGMVREGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVW 494

Query: 204 TTMITG 209
             +++ 
Sbjct: 495 GALLSA 500


>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
 gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 272/751 (36%), Positives = 416/751 (55%), Gaps = 8/751 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N +++ Y   G + +A +LF+  P +N  +W+S+I  +S+ G   E+F L  +M 
Sbjct: 221 DVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMM 280

Query: 126 LE----GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
            E     + P   TL  VL +C+ +  +  G+  HG+A+K   D    +   L+DMY+KC
Sbjct: 281 EENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKC 340

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV--EGVESNQFTFP 239
            CI  A+ +FKM  + KN V+W TM+ G+S  G      +  R M    E V++++ T  
Sbjct: 341 GCITNAQMIFKM-NNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTIL 399

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
           + +  C   S      ++H   L   F  N  V +A +  YAKCG L  A+R+       
Sbjct: 400 NAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSK 459

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
              SWN++I G A+    + +L    +M    +  D FT  S+L+  +    L   K VH
Sbjct: 460 TVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVH 519

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
             I++   E   FV  +++ +Y   G L     +F+ M+DK ++SW ++ITG   +G  +
Sbjct: 520 GFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPD 579

Query: 420 EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
            AL  F  M + GI    + +  +  AC+ L  L  G++ HA  LK        +  SL+
Sbjct: 580 RALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLI 639

Query: 480 LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
            +YAK G I  +++VF+ +  +   +W A+IMG   +G  KEA++ +++M   G  PD +
Sbjct: 640 DMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDL 699

Query: 540 TFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA-KALLD 598
           TF+G+L AC+H+GL      Y + M   +G+KP   HYAC+ID+LGR+G+L +A + + +
Sbjct: 700 TFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAE 759

Query: 599 QMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWED 658
           +M  E D  +WK+LLS+CR+H +LE+GE+ A  LFELEP     YV LSN+Y+  GKWED
Sbjct: 760 EMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWED 819

Query: 659 AARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGY 718
             +VR+ M    +RK+ GCSW+E N +V  F+  +R      +I S    + + I + GY
Sbjct: 820 VRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGY 879

Query: 719 VPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKY 778
            PD     H++ EE K   L  HSEKLA+ +GL+   +G  IR++KNLR+C DCH A K 
Sbjct: 880 RPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKL 939

Query: 779 ISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           IS V  R I++RD+ RFHHFK G CSCGDYW
Sbjct: 940 ISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 161/560 (28%), Positives = 272/560 (48%), Gaps = 20/560 (3%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRP 131
           +I  YA  G   +++ +F+    KN F W+++I  YS   L  E  E F +M       P
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
             +T   V++ C+    +  G   HG  +KT    + FV   LV  Y     + +A  LF
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES----NQFTFPSILTACAA 247
            + P+ +N V+W +MI  +S NG+  ++     +M  E  +     +  T  ++L  CA 
Sbjct: 246 DIMPE-RNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAR 304

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
                 G  VHG  +    +  + + +AL+DMY+KCG + +A+ + + +   N VSWN+M
Sbjct: 305 EREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTM 364

Query: 308 IVGFARQGFHKEALSLFKKMHA--RDIKIDDFT-YPSVLNCFASNIDLNNAKSVHSLIVK 364
           + GF+ +G       + ++M A   D+K D+ T   +V  CF  +  L + K +H   +K
Sbjct: 365 VGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF-LPSLKELHCYSLK 423

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
             F   + V NA +  YAK G+L  A  VF+ ++ K V SW +LI G A       +L  
Sbjct: 424 QEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDA 483

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
              M+ISG+ PD   V S+LSAC++L  L  G++VH   +++     L V  S++ +Y  
Sbjct: 484 HLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIH 543

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG +     +FD+M  + +++W  +I G  QNG    AL  + QM+  G +   I+ + +
Sbjct: 544 CGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPV 603

Query: 545 LFACSHAGLAENARWYFESMDKVYGIK---PGPDHYAC-MIDLLGRSGKLIEAKALLDQM 600
             ACS   L  + R   E+    Y +K         AC +ID+  ++G + ++  + + +
Sbjct: 604 FGACS---LLPSLRLGREA--HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGL 658

Query: 601 VGEPDATVWKALLSACRVHG 620
             E     W A++    +HG
Sbjct: 659 -KEKSTASWNAMIMGYGIHG 677



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 189/385 (49%), Gaps = 8/385 (2%)

Query: 172 TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEG 230
           T ++ MYA C    ++ ++F      KN   W  +I+ YS+N    + +E F +M     
Sbjct: 124 TRIITMYAMCGSPDDSRFVFDALR-SKNLFQWNAVISSYSRNELYDEVLETFIEMISTTD 182

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           +  + FT+P ++ ACA +S    G  VHG ++ +G   +V+V +AL+  Y   G +  A 
Sbjct: 183 LLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDAL 242

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD----IKIDDFTYPSVLNCF 346
           +L +     N VSWNSMI  F+  GF +E+  L  +M   +       D  T  +VL   
Sbjct: 243 QLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC 302

Query: 347 ASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWT 406
           A   ++   K VH   VK   +    +NNAL+DMY+K G +  A M+F +  +K+V+SW 
Sbjct: 303 AREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWN 362

Query: 407 SLITGCAYHGSYEEALKYFSDMRISG--ICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
           +++ G +  G           M   G  +  D V + + +  C   + L   +++H   L
Sbjct: 363 TMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSL 422

Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ 524
           K     +  V N+ V  YAKCG ++ A RVF  + ++ V +W ALI G AQ+   + +L 
Sbjct: 423 KQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLD 482

Query: 525 FYDQMLARGTKPDYITFVGLLFACS 549
            + QM   G  PD  T   LL ACS
Sbjct: 483 AHLQMKISGLLPDSFTVCSLLSACS 507



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 154/318 (48%), Gaps = 8/318 (2%)

Query: 241 ILTACAAVSARDFGAQVHGCIL-SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
           +L A       + G ++H  +  S+    +  + + +I MYA CG  D +R + +     
Sbjct: 90  LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKM-HARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
           N   WN++I  ++R   + E L  F +M    D+  D FTYP V+   A   D+    +V
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           H L+VKTG     FV NAL+  Y   G +  A  +F++M +++++SW S+I   + +G  
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269

Query: 419 EEALKYFSDMRIS----GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
           EE+     +M          PD   + ++L  CA    +  G+ VH   +K      L +
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG- 533
           +N+L+ +Y+KCGCI +A  +F   + ++V++W  ++ G +  G          QMLA G 
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 389

Query: 534 -TKPDYITFVGLLFACSH 550
             K D +T +  +  C H
Sbjct: 390 DVKADEVTILNAVPVCFH 407



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 126/248 (50%), Gaps = 4/248 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           +RD F + ++++ Y + G L   + LF+    K+  +W+++I GY   G    A  +F Q
Sbjct: 528 ERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQ 587

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M L G +    ++  V   CSL   L+ G + H YA+K   + +AF+   L+DMYAK   
Sbjct: 588 MVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGS 647

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I ++  +F    + K+  +W  MI GY  +G   +AI+ F +M+  G   +  TF  +LT
Sbjct: 648 ITQSSKVFNGLKE-KSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLT 706

Query: 244 ACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLL--EYSEIDN 300
           AC        G +    + SS G + N+   + +IDM  + G LD A R++  E SE  +
Sbjct: 707 ACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEAD 766

Query: 301 EVSWNSMI 308
              W S++
Sbjct: 767 VGIWKSLL 774


>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera]
 gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
          Length = 703

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 258/654 (39%), Positives = 379/654 (57%), Gaps = 7/654 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLD--IEAFELFWQMQLEG 128
           N+++  YA   RLREAK +F     K+  +W+ +I GYS +G        ELF +M+ E 
Sbjct: 44  NSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAEN 103

Query: 129 YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIK--TCFDLNAFVVTGLVDMYAKCKCIFE 186
             P+ +T   V    S       G   H  AIK  +C D+  FV + L++MY K     E
Sbjct: 104 TAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDV--FVGSSLMNMYCKAGLTPE 161

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A  +F   P+ +N V+W TMI+GY+      +A+  FR MR E    N+F F S+L+A  
Sbjct: 162 ARKVFDTMPE-RNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALT 220

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
                + G Q+H   + +G  + V V +AL+ MYAKCG LD A +  E S   N ++W++
Sbjct: 221 LPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSA 280

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           MI G+A+ G   +AL LF  MH   I+  +FT+  V+N  +        K VH  ++K G
Sbjct: 281 MITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLG 340

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
           FE   +V  AL+DMYAK  ++  A   F+ +Q+ D++ WTS+I G   +G  E+AL  + 
Sbjct: 341 FESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYG 400

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
            M + GI P+ + ++S+L AC+ L  LE G+Q+HA  +K G    + + ++L  +YAKCG
Sbjct: 401 RMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCG 460

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
           C+ D   VF  M  RDVI+W A+I G +QNG GKEAL+ +++M   GTKPDY+TFV +L 
Sbjct: 461 CLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILS 520

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ACSH GL E    YF  M   +G+ P  +HYACM+D+L R+GKL EA    +    +   
Sbjct: 521 ACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGM 580

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
            +W+ +L ACR + + ELG  A   L EL    +  YV LS++YS  G+WED  RVR++M
Sbjct: 581 CLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSSIYSALGRWEDVERVRRMM 640

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
           K RG+ KEPGCSW+E  S VH+F+ +D+ HP   DI+ ++ ++   +K+ GY P
Sbjct: 641 KLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIHVELRQLSKQMKDEGYEP 694



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 141/477 (29%), Positives = 212/477 (44%), Gaps = 69/477 (14%)

Query: 29  VGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAK 87
           V N +     +  ALV  ++  G +D+A Q FE  SD++  TW+ MI  YA SG   +A 
Sbjct: 236 VKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKAL 295

Query: 88  KLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKG 147
           KLF+                                M L G RPS++T   V+  CS  G
Sbjct: 296 KLFS-------------------------------SMHLSGIRPSEFTFVGVINACSDLG 324

Query: 148 LLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
               G+Q H Y +K  F+   +V+T LVDMYAKC  I +A   F    +  + V WT+MI
Sbjct: 325 AAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQE-PDIVLWTSMI 383

Query: 208 TGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFE 267
            GY QNG    A+  +  M +EG+  N+ T  S+L AC++++A + G Q+H   +  GF 
Sbjct: 384 GGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFG 443

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM 327
             V + SAL  MYAKCG L     +       + +SWN+MI G ++ G  KEAL LF++M
Sbjct: 444 LEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEM 503

Query: 328 HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL 387
                K D  T+ ++L+  +           H  +V+ G+  ++ +              
Sbjct: 504 QLEGTKPDYVTFVNILSACS-----------HMGLVERGWGYFRMM-------------- 538

Query: 388 DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS-GICPDHVVVSSILSA 446
              F  F +  D  V  +  ++   +  G  +EA+++     I  G+C   +    IL A
Sbjct: 539 ---FDEFGM--DPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRI----ILGA 589

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDV 503
           C      E G       ++ G   S S    L  +Y+  G   D  RV   M  R V
Sbjct: 590 CRNYRNYELGAYAGEKLMELGSQES-SAYVLLSSIYSALGRWEDVERVRRMMKLRGV 645


>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 697

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 238/571 (41%), Positives = 368/571 (64%), Gaps = 1/571 (0%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           + S++TACA   + D    +H  +  S F  +V++ ++LI +Y KCG +  ARR+ +   
Sbjct: 67  YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
             +  SW S+I G+A+     EAL L   M     K + FT+ S+L    ++      + 
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           +H+L VK  +    +V +AL+DMYA+ G +D A  VF+ ++ K+ +SW +LI G A  G 
Sbjct: 187 IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGD 246

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
            E  L  F++M+ +G    H   SS+ SA A +  LE G+ VHA  +KSG   S  V N+
Sbjct: 247 GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNT 306

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
           ++ +YAK G + DA +VFD +  +DV+TW +++   AQ G G+EA+  +++M   G   +
Sbjct: 307 ILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLN 366

Query: 538 YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALL 597
            ITF+ +L ACSH GL +  + YF+ M K Y ++P  DHY  ++DLLGR+G L +A   +
Sbjct: 367 QITFLSILTACSHGGLVKEGKQYFDMM-KEYNLEPEIDHYVTVVDLLGRAGLLNDALVFI 425

Query: 598 DQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWE 657
            +M  +P A VW ALL +CR+H + ++G+ AA+++FEL+P +  P V L N+Y++ G+W+
Sbjct: 426 FKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWD 485

Query: 658 DAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAG 717
            AARVRK+MK+ G++KEP CSWVE  + VH+F++ D  HP   +IY K +EI + I++AG
Sbjct: 486 AAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAG 545

Query: 718 YVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMK 777
           YVP+ ++ L +V+E+ ++  L YHSEK+A+AF L+ +P GA IRI KN+R+CGDCH+A +
Sbjct: 546 YVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFR 605

Query: 778 YISAVYLRHIILRDSNRFHHFKAGNCSCGDY 808
           YIS V+ R I++RD+NRFHHF +G+CSCGDY
Sbjct: 606 YISKVFKREIVVRDTNRFHHFSSGSCSCGDY 636



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 197/384 (51%), Gaps = 2/384 (0%)

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           +++  C+    L      H +   + F  + F+   L+ +Y KC  + +A  +F   P  
Sbjct: 69  SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP-A 127

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           ++  +WT++I GY+QN    +A+     M     + N FTF S+L A  A ++   G Q+
Sbjct: 128 RDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQI 187

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           H   +   +  +VYV SAL+DMYA+CG +D A  + +  E  N VSWN++I GFAR+G  
Sbjct: 188 HALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDG 247

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
           +  L +F +M     +   FTY SV +  A    L   K VH+ ++K+G     FV N +
Sbjct: 248 ETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTI 307

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           +DMYAK G++  A  VF+ +  KDV++W S++T  A +G   EA+ +F +MR  G+  + 
Sbjct: 308 LDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQ 367

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR-VFD 496
           +   SIL+AC+   +++ G+Q   +  +      +    ++V +  + G +NDA   +F 
Sbjct: 368 ITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFK 427

Query: 497 SMHTRDVITWTALIMGCAQNGKGK 520
                    W AL+  C  +   K
Sbjct: 428 MPMKPTAAVWGALLGSCRMHKNAK 451



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 177/349 (50%), Gaps = 2/349 (0%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N++I  Y   G + +A+++F+  P ++  +W+SLI GY+   +  EA  L   M   
Sbjct: 100 FLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRG 159

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
            ++P+ +T  ++L+          GEQ H   +K  +  + +V + L+DMYA+C  +  A
Sbjct: 160 RFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMA 219

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F    + KN V+W  +I G+++ G G   +  F +M+  G E+  FT+ S+ +A A 
Sbjct: 220 IAVFDQL-ESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAG 278

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           + A + G  VH  ++ SG   + +V + ++DMYAK G +  AR++ +  +  + V+WNSM
Sbjct: 279 IGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSM 338

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           +  FA+ G  +EA++ F++M    + ++  T+ S+L   +    +   K    ++ +   
Sbjct: 339 LTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNL 398

Query: 368 EGYKFVNNALIDMYAKQGNL-DCAFMVFNLMQDKDVISWTSLITGCAYH 415
           E        ++D+  + G L D    +F +        W +L+  C  H
Sbjct: 399 EPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMH 447



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 175/354 (49%), Gaps = 17/354 (4%)

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD 388
           AR++      Y S++   A    L++A+++H+ +  + F G  F++N+LI +Y K G + 
Sbjct: 57  ARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVA 116

Query: 389 CAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
            A  VF+ M  +D+ SWTSLI G A +   +EAL     M      P+    +S+L A  
Sbjct: 117 DARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAG 176

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
                  G+Q+HA+ +K      + V ++L+ +YA+CG ++ A  VFD + +++ ++W A
Sbjct: 177 ASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNA 236

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
           LI G A+ G G+  L  + +M   G +  + T+  +  A +  G  E  +W    M    
Sbjct: 237 LIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHM---- 292

Query: 569 GIKPGPDHYA----CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLEL 624
            IK G    A     ++D+  +SG +I+A+ + D+ V + D   W ++L+A   +G   L
Sbjct: 293 -IKSGERLSAFVGNTILDMYAKSGSMIDARKVFDR-VDKKDVVTWNSMLTAFAQYG---L 347

Query: 625 GERAANNLFELEP----MNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
           G  A  +  E+      +N + ++ +    S  G  ++  +   +MK   +  E
Sbjct: 348 GREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPE 401



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 148/305 (48%), Gaps = 5/305 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +  + ++  YA  GR+  A  +F++   KN  +W++LI G++  G       +F +MQ
Sbjct: 199 DVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQ 258

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G+  + +T  +V    +  G L++G+  H + IK+   L+AFV   ++DMYAK   + 
Sbjct: 259 RNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMI 318

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A  +F    D K+ V W +M+T ++Q G G +A+  F +MR  GV  NQ TF SILTAC
Sbjct: 319 DARKVFDRV-DKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTAC 377

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           +       G Q    +     E  +     ++D+  + G L+ A   +    +    +  
Sbjct: 378 SHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVW 437

Query: 306 SMIVGFARQGFHKEA-LSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIV 363
             ++G  R   HK A +  F   H  ++  DD   P +L N +AS    + A  V  ++ 
Sbjct: 438 GALLGSCR--MHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMK 495

Query: 364 KTGFE 368
            TG +
Sbjct: 496 ATGVK 500



 Score = 47.8 bits (112), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 13/201 (6%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP----F 95
           N  L  ++ SG + +A ++F+++  +D  TWN+M+ A+A  G  REA   F E       
Sbjct: 305 NTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVH 364

Query: 96  KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
            N  T+ S++   S+ GL  E  + F  M+     P       V+ L    GLL     F
Sbjct: 365 LNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVF 424

Query: 156 HGYAIKTCFDLNAFV---VTGLVDMYAKCKC-IFEAEYLFKMFPDGKNHVAWTTMITGYS 211
                K      A V   + G   M+   K   F A+++F++ PD          I  Y+
Sbjct: 425 ---IFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNI--YA 479

Query: 212 QNGYGFKAIECFRDMRVEGVE 232
             G    A    + M+  GV+
Sbjct: 480 STGQWDAAARVRKMMKATGVK 500


>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
 gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 253/622 (40%), Positives = 374/622 (60%), Gaps = 2/622 (0%)

Query: 190 LFKMFPDGK-NHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILTACAA 247
           LF++ P    +   +  ++      G+   A+  F +M  V  V  +Q T    L +C+ 
Sbjct: 72  LFRLGPRPPLSTPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSR 131

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           +   D G  +    +  G  A+ +V S+LI MYA C D+ +A+ L +  E +  V WN++
Sbjct: 132 MCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAI 191

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I  + + G   E + +FK M    +  D+ T  SV+       D    K V   + + G 
Sbjct: 192 ITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGL 251

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
              + +  ALIDMYAK G L  A  +F+ MQ +DV++W+++I+G        EAL  FS+
Sbjct: 252 VRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSE 311

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           M+++ + P+ V + S+LSACA L  LE G+ VH+   +     ++ +  +LV  YAKCGC
Sbjct: 312 MQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGC 371

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           I+DA   F+SM  ++  TWTALI G A NG+G+EAL+ +  M     +P  +TF+G+L A
Sbjct: 372 IDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMA 431

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
           CSH+ L E  R +F+SM + YGIKP  +HY C++DLLGR+G + EA   +  M  EP+A 
Sbjct: 432 CSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAV 491

Query: 608 VWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
           +W+ALLS+C VH ++E+GE A   +  L P ++  Y+ LSN+Y++ G+W++AA +RK MK
Sbjct: 492 IWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMK 551

Query: 668 SRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALH 727
            RGI K PGCS +E +  V  F +ED  HP   +IY K++E++  IK AGY+P+      
Sbjct: 552 DRGIEKTPGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTADVRL 611

Query: 728 NVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHI 787
            V+E  KE+ +++HSEKLA+AFGL+ L  GA IR+ KNLRVC DCH+A K IS VY R I
Sbjct: 612 EVDEHEKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCTDCHSATKLISKVYNREI 671

Query: 788 ILRDSNRFHHFKAGNCSCGDYW 809
           ++RD NRFHHFK G CSC DYW
Sbjct: 672 VVRDRNRFHHFKDGTCSCNDYW 693



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 154/512 (30%), Positives = 244/512 (47%), Gaps = 22/512 (4%)

Query: 21  GPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANS 80
           GPA     +    +    L+ AL+    SGE+  + + F  + +          AA A+ 
Sbjct: 17  GPAPPHAPLRTDPRYLPQLHAALI---KSGELTGSPKCFHSLLE----------AAAASP 63

Query: 81  GRLREAKKLFNETPFKNFFT--WSSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQYTLD 137
             L  A  LF   P     T  ++ L+    + G   +A  LF +M  +    P Q+T+ 
Sbjct: 64  TLLPYAVSLFRLGPRPPLSTPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVA 123

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
             L+ CS    L  G     YA+K     + FV++ L+ MYA C+ +  A+ LF    + 
Sbjct: 124 CALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEE- 182

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
              V W  +IT Y +NG   + +E F+ M   GV  ++ T  S++TAC  +     G  V
Sbjct: 183 NGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWV 242

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
              +   G   N  + +ALIDMYAKCG+L  ARRL +  +  + V+W++MI G+ +    
Sbjct: 243 AEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQC 302

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
           +EAL+LF +M   +++ +D T  SVL+  A    L   K VHS I +        +  AL
Sbjct: 303 REALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTAL 362

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           +D YAK G +D A   F  M  K+  +WT+LI G A +G   EAL+ FS MR + I P  
Sbjct: 363 VDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTD 422

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL-VYAKCGCINDANRVFD 496
           V    +L AC+   ++E G++      +  G    +     V+ +  + G I++A +   
Sbjct: 423 VTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIR 482

Query: 497 SMHTR-DVITWTALIMGCAQNGK---GKEALQ 524
           +M    + + W AL+  CA +     G+EAL+
Sbjct: 483 TMPIEPNAVIWRALLSSCAVHKNVEIGEEALK 514


>gi|359493563|ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71420-like [Vitis vinifera]
          Length = 741

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 280/707 (39%), Positives = 407/707 (57%), Gaps = 23/707 (3%)

Query: 116 EAFELFWQMQLEG-YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI--KTCFDLNAFVVT 172
           EA +LF+ +        S +T   + + C+ +  L  G+  H +        D N F+  
Sbjct: 45  EALKLFYSITPPPPLVHSHHTYAALFQACARRSSLPEGQALHRHMFLHNPNSDFNLFLTN 104

Query: 173 GLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV- 231
            +V+MYAKC  +  A  +F   P+ KN V+WT +++GY+Q+G   ++ ECFR  R   + 
Sbjct: 105 HVVNMYAKCGSLDYAHQMFDEMPE-KNIVSWTALVSGYAQHG---RSNECFRVFRGMLIW 160

Query: 232 -ESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK-CGDLDSA 289
            +  +F F S+++AC      + G QVH   L + F++ VYV +ALI MY K CG  D A
Sbjct: 161 HQPTEFAFASVISACGGDD--NCGRQVHALALKTSFDSCVYVGNALIMMYCKSCGGADEA 218

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
             + E     N VSWNSMI GF   G    AL LF +MH   I+ D  T  S+ +C    
Sbjct: 219 WNVYEAMGFRNLVSWNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGM 278

Query: 350 ID-LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN--LDCAFMVFNLMQDKDVISWT 406
            D L     +  L +KTGF     V  AL+  Y+  G    DC  +   L   +DV+SWT
Sbjct: 279 GDGLECCFQLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLELDGRQDVVSWT 338

Query: 407 SLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
            +I   A     ++AL  F       + PD  + S +L ACA L        V +  LK 
Sbjct: 339 GIIAAFAERDP-KKALVIFRQFLRECLAPDRHMFSIVLKACAGLATERHALTVQSHVLKV 397

Query: 467 GGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFY 526
           G    + + N+L+   A+CG +  + +VFD M +RD ++W +++   A +G+GKEAL  +
Sbjct: 398 GFEDDIVLANALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHGQGKEALLLF 457

Query: 527 DQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGR 586
            QM A   +PD  TFV LL ACSHAG+AE     FE+M   +GI P  DHYACM+D+LGR
Sbjct: 458 SQMDA---QPDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQLDHYACMVDILGR 514

Query: 587 SGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQL 646
           +G++ EAK L+D+M  EPD+ VW ALL +CR HG+ +L + AA  L EL+P N++ YV +
Sbjct: 515 AGQISEAKELIDKMPMEPDSVVWSALLGSCRKHGETKLAKLAAVKLKELDPNNSLGYVLM 574

Query: 647 SNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKI 706
           SN++ T G++ +A  +R+ M+ + +RKEPG SW+E  +QVH F S  + HP +  I +++
Sbjct: 575 SNIFCTDGRFNEARLIRREMEGKIVRKEPGLSWIEVGNQVHEFASGGQQHPEKEAICARL 634

Query: 707 DEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLP----QGAPIRI 762
           +E++  +K+ GYVP ++ ALH++E+E KE  L YHSEKLA+AF L+ +      G  I+I
Sbjct: 635 EELVRRLKDLGYVPQISLALHDIEDEHKEEQLYYHSEKLALAFALMNVGSICCSGNTIKI 694

Query: 763 FKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            KN+R+C DCH  MK  S +    I++RDSNRFHHFKA  CSC DYW
Sbjct: 695 MKNIRICVDCHNFMKLASELVDMEIVVRDSNRFHHFKAKVCSCNDYW 741



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 141/466 (30%), Positives = 228/466 (48%), Gaps = 14/466 (3%)

Query: 63  SDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFW 122
           SD + F  N ++  YA  G L  A ++F+E P KN  +W++L+ GY+ +G   E F +F 
Sbjct: 96  SDFNLFLTNHVVNMYAKCGSLDYAHQMFDEMPEKNIVSWTALVSGYAQHGRSNECFRVFR 155

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK-C 181
            M L  ++P+++   +V+  C   G    G Q H  A+KT FD   +V   L+ MY K C
Sbjct: 156 GM-LIWHQPTEFAFASVISACG--GDDNCGRQVHALALKTSFDSCVYVGNALIMMYCKSC 212

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
               EA  +++     +N V+W +MI G+   G G +A+E F  M V G+  ++ T  SI
Sbjct: 213 GGADEAWNVYEAM-GFRNLVSWNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRATLVSI 271

Query: 242 LTA-CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD--LDSARRLLEYSEI 298
            +  C      +   Q+    + +GF   + V +AL+  Y+  G    D  R  LE    
Sbjct: 272 FSCLCGMGDGLECCFQLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLELDGR 331

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
            + VSW  +I  FA +   K+AL +F++     +  D   +  VL   A      +A +V
Sbjct: 332 QDVVSWTGIIAAFAERD-PKKALVIFRQFLRECLAPDRHMFSIVLKACAGLATERHALTV 390

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
            S ++K GFE    + NALI   A+ G++  +  VF+ M  +D +SW S++   A HG  
Sbjct: 391 QSHVLKVGFEDDIVLANALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHGQG 450

Query: 419 EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG-CSSLSVDNS 477
           +EAL  FS M      PD     ++LSAC+   + E G ++      + G    L     
Sbjct: 451 KEALLLFSQMDAQ---PDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQLDHYAC 507

Query: 478 LVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEA 522
           +V +  + G I++A  + D M    D + W+AL+  C ++G+ K A
Sbjct: 508 MVDILGRAGQISEAKELIDKMPMEPDSVVWSALLGSCRKHGETKLA 553



 Score = 46.6 bits (109), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 1/79 (1%)

Query: 47  SNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK-NFFTWSSLI 105
           +  G +  + Q+F+KM  RD  +WN+M+ AYA  G+ +EA  LF++   + +  T+ +L+
Sbjct: 414 ARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHGQGKEALLLFSQMDAQPDGATFVALL 473

Query: 106 YGYSNYGLDIEAFELFWQM 124
              S+ G+  E  ++F  M
Sbjct: 474 SACSHAGMAEEGAKIFETM 492


>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 246/579 (42%), Positives = 368/579 (63%), Gaps = 1/579 (0%)

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           +E ++  + ++L  C  +     G  VH  +L+S F+ ++ +Q++L+ MYA+CG L+ AR
Sbjct: 70  LEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGAR 129

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
           RL +     + VSW SMI G+A+     +AL LF +M +   + ++FT  S++ C     
Sbjct: 130 RLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMA 189

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
             N  + +H+   K G     FV ++L+DMYA+ G L  A +VF+ +  K+ +SW +LI 
Sbjct: 190 SYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIA 249

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
           G A  G  EEAL  F  M+  G  P     S++LS+C+ +  LE G+ +HA  +KS    
Sbjct: 250 GYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKL 309

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
              V N+L+ +YAK G I DA +VFD +   DV++  ++++G AQ+G GKEA Q +D+M+
Sbjct: 310 VGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMI 369

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKL 590
             G +P+ ITF+ +L ACSHA L +  + YF  M K Y I+P   HYA ++DLLGR+G L
Sbjct: 370 RFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRK-YNIEPKVSHYATIVDLLGRAGLL 428

Query: 591 IEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMY 650
            +AK+ +++M  EP   +W ALL A ++H + E+G  AA  +FEL+P     +  L+N+Y
Sbjct: 429 DQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIY 488

Query: 651 STAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIM 710
           ++AG+WED A+VRK+MK  G++KEP CSWVE  + VH+F++ D  HP +  I+   +++ 
Sbjct: 489 ASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEKLN 548

Query: 711 LLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCG 770
             IKE GYVPD +  L  V+++ KE+ L YHSEKLA++F LL  P G+ IRI KN+RVCG
Sbjct: 549 QKIKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGSTIRIMKNIRVCG 608

Query: 771 DCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           DCH+A+KY+S V  R II+RD+NRFHHF  G CSCGDYW
Sbjct: 609 DCHSAIKYVSLVVKREIIVRDTNRFHHFCDGFCSCGDYW 647



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 212/391 (54%), Gaps = 1/391 (0%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P +   + +L+ C+  G L+ G+  H + + + F  +  +   L+ MYA+C  +  A  L
Sbjct: 72  PDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRL 131

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P  ++ V+WT+MITGY+QN     A+  F  M  +G E N+FT  S++  C  +++
Sbjct: 132 FDEMPH-RDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMAS 190

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            + G Q+H C    G  +NV+V S+L+DMYA+CG L  A  + +     NEVSWN++I G
Sbjct: 191 YNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAG 250

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           +AR+G  +EAL+LF +M     +  +FTY ++L+  +S   L   K +H+ ++K+  +  
Sbjct: 251 YARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLV 310

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
            +V N L+ MYAK G++  A  VF+ +   DV+S  S++ G A HG  +EA + F +M  
Sbjct: 311 GYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIR 370

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
            GI P+ +   S+L+AC+   +L+ G+    +  K      +S   ++V +  + G ++ 
Sbjct: 371 FGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQ 430

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKE 521
           A    + M     +     ++G ++  K  E
Sbjct: 431 AKSFIEEMPIEPTVAIWGALLGASKMHKNTE 461



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 207/415 (49%), Gaps = 10/415 (2%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N+++  YA  G L  A++LF+E P ++  +W+S+I GY+      +A  LF +M  +G  
Sbjct: 113 NSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAE 172

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+++TL ++++ C        G Q H    K     N FV + LVDMYA+C  + EA  +
Sbjct: 173 PNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLV 232

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F      KN V+W  +I GY++ G G +A+  F  M+ EG    +FT+ ++L++C+++  
Sbjct: 233 FDKL-GCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGC 291

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            + G  +H  ++ S  +   YV + L+ MYAK G +  A ++ +     + VS NSM++G
Sbjct: 292 LEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIG 351

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           +A+ G  KEA   F +M    I+ +D T+ SVL   +    L+  K    L+ K   E  
Sbjct: 352 YAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPK 411

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEALKYFSDMR 429
                 ++D+  + G LD A      M  +  ++ W +L+     H + E  +  ++  R
Sbjct: 412 VSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTE--MGAYAAQR 469

Query: 430 ISGICPDHVVVSSILSAC-AELTVLEFGQQVHAVFLKSG-----GCSSLSVDNSL 478
           +  + P +    ++L+   A     E   +V  +   SG      CS + V+NS+
Sbjct: 470 VFELDPSYPGTHTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSV 524



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 208/432 (48%), Gaps = 36/432 (8%)

Query: 267 EANVYVQSALIDMYAKCG-DLDSARRLLEYSE-----IDNEVSWNSMIVGFARQGFH-KE 319
           E +  V  +L+ + + C  DL S RRL ++SE     ID+            R   + K 
Sbjct: 6   ERSSSVLKSLLQIVSPCKRDLGSFRRLWQHSESTFCVIDDR--------NLLRPSLNSKT 57

Query: 320 ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALID 379
            L +   +    ++ D   Y ++L        L   K VH  ++ + F+    + N+L+ 
Sbjct: 58  GLHVLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLF 117

Query: 380 MYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVV 439
           MYA+ G+L+ A  +F+ M  +D++SWTS+ITG A +    +AL  F  M   G  P+   
Sbjct: 118 MYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFT 177

Query: 440 VSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH 499
           +SS++  C  +     G+Q+HA   K G  S++ V +SLV +YA+CG + +A  VFD + 
Sbjct: 178 LSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLG 237

Query: 500 TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW 559
            ++ ++W ALI G A+ G+G+EAL  + +M   G +P   T+  LL +CS  G  E  +W
Sbjct: 238 CKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKW 297

Query: 560 ----YFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
                 +S  K+ G          ++ +  +SG + +A+ + D++V + D     ++L  
Sbjct: 298 LHAHLMKSSQKLVGYVGNT-----LLHMYAKSGSIRDAEKVFDKLV-KVDVVSCNSMLIG 351

Query: 616 CRVHGDLELGERAANNL-----FELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRG 670
              HG   LG+ AA        F +EP N + ++ +    S A   ++      LM+   
Sbjct: 352 YAQHG---LGKEAAQQFDEMIRFGIEP-NDITFLSVLTACSHARLLDEGKHYFGLMRKYN 407

Query: 671 IRKEPGCSWVET 682
           I  EP  S   T
Sbjct: 408 I--EPKVSHYAT 417



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 132/242 (54%), Gaps = 2/242 (0%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  ++++  YA  G L EA  +F++   KN  +W++LI GY+  G   EA  LF +MQ E
Sbjct: 211 FVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQRE 270

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           GYRP+++T   +L  CS  G L++G+  H + +K+   L  +V   L+ MYAK   I +A
Sbjct: 271 GYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDA 330

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
           E +F       + V+  +M+ GY+Q+G G +A + F +M   G+E N  TF S+LTAC+ 
Sbjct: 331 EKVFDKLVK-VDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSH 389

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNS 306
               D G    G +     E  V   + ++D+  + G LD A+  +E   I+  V+ W +
Sbjct: 390 ARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGA 449

Query: 307 MI 308
           ++
Sbjct: 450 LL 451



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 69/141 (48%)

Query: 67  GFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL 126
           G+  NT++  YA SG +R+A+K+F++    +  + +S++ GY+ +GL  EA + F +M  
Sbjct: 311 GYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIR 370

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
            G  P+  T  +VL  CS   LL  G+ + G   K   +        +VD+  +   + +
Sbjct: 371 FGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQ 430

Query: 187 AEYLFKMFPDGKNHVAWTTMI 207
           A+   +  P       W  ++
Sbjct: 431 AKSFIEEMPIEPTVAIWGALL 451


>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 284/774 (36%), Positives = 425/774 (54%), Gaps = 82/774 (10%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY-SNYGLDIEAFELFW 122
           D D   WN  I+AY   G+   A  +FN    ++  T++++I GY SN   D  A ++F 
Sbjct: 57  DSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDC-ARKVFE 115

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           +M      P +                               DL ++ V  ++  Y K  
Sbjct: 116 KM------PDR-------------------------------DLISWNV--MLSGYVKNG 136

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            +  A  LF   P+ K+ V+W  M++G++QNG+  +A + F  M V+    N+ ++  +L
Sbjct: 137 NLSAARALFNQMPE-KDVVSWNAMLSGFAQNGFVEEARKIFDQMLVK----NEISWNGLL 191

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           +A    + R   A+    +  S  +  +   + L+  Y +   LD AR L +   + +++
Sbjct: 192 SAYVQ-NGRIEDARR---LFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKI 247

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS----- 357
           SWN MI G+A+ G   EA  LF+++  RD+    F + ++++ F  N  L+ A       
Sbjct: 248 SWNIMITGYAQNGLLSEARRLFEELPIRDV----FAWTAMVSGFVQNGMLDEATRIFEEM 303

Query: 358 ---------------VHSLIVKTGFEGYKFVN-------NALIDMYAKQGNLDCAFMVFN 395
                          V S  ++   E +  +        N ++  YA+ GN+D A ++F+
Sbjct: 304 PEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFD 363

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
            M  +D ISW ++I+G A  G  EEAL  F  M+  G   +   ++  LS+CAE+  LE 
Sbjct: 364 EMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALEL 423

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
           G+Q+H   +K+G  +     N+L+ +Y KCG I +A  VF+ +  +D+++W  +I G A+
Sbjct: 424 GKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYAR 483

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
           +G GKEAL  ++ M     KPD +T VG+L ACSH G  +    YF SM + YGI     
Sbjct: 484 HGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAK 542

Query: 576 HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
           HY CMIDLLGR+G+L EA  L+  M   PDA  W ALL A R+HGD ELGE+AA  +FE+
Sbjct: 543 HYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEM 602

Query: 636 EPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG 695
           EP N+  YV LSN+Y+ +G+W +   +R  M+ +G++K PG SWVE  ++ HIF   D  
Sbjct: 603 EPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCS 662

Query: 696 HPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLP 755
           HP    IY+ ++E+ L +K+ G+V      LH+VEEE KE  L YHSEKLAVAFG+L++P
Sbjct: 663 HPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIP 722

Query: 756 QGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            G PIR+ KNLRVC DCH A+K+IS +  R II+RDSNRFHHF  G+CSCGDYW
Sbjct: 723 PGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSCGDYW 776



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 133/500 (26%), Positives = 243/500 (48%), Gaps = 43/500 (8%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  + ++ + D A ++FEKM DRD  +WN M++ Y  +G L  A+ LFN+ P K+  
Sbjct: 95  NAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVV 154

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           +W++++ G++  G   EA ++F QM ++    ++ + + +L      G ++   +     
Sbjct: 155 SWNAMLSGFAQNGFVEEARKIFDQMLVK----NEISWNGLLSAYVQNGRIEDARRL---- 206

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
             +  D        L+  Y + K + +A  LF   P  ++ ++W  MITGY+QNG   +A
Sbjct: 207 FDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMP-VRDKISWNIMITGYAQNGLLSEA 265

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARD----------------FGAQVHGCILS 263
              F ++ +  V    F + ++++        D                + A + G + S
Sbjct: 266 RRLFEELPIRDV----FAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQS 321

Query: 264 SGFEA-----------NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
              E            N    + ++  YA+CG++D A+ L +     + +SW +MI G+A
Sbjct: 322 QQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYA 381

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
           + G  +EAL LF KM      ++       L+  A    L   K +H  +VK GF+    
Sbjct: 382 QSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYI 441

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
             NAL+ MY K G+++ AF VF  + +KD++SW ++I G A HG  +EAL  F  M+++ 
Sbjct: 442 AGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT- 500

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQ-VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
           I PD V +  +LSAC+    ++ G +  ++++   G  ++      ++ +  + G +++A
Sbjct: 501 IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEA 560

Query: 492 NRVFDSM-HTRDVITWTALI 510
             +  SM    D  TW AL+
Sbjct: 561 LNLMKSMPFYPDAATWGALL 580



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 125/394 (31%), Positives = 192/394 (48%), Gaps = 60/394 (15%)

Query: 52  IDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNY 111
           +D+A  LF++M  RD  +WN MI  YA +G L EA++LF E P ++ F W++++ G+   
Sbjct: 231 LDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQN 290

Query: 112 GLDIEAFELF----------WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIK 161
           G+  EA  +F          W   + GY  SQ              + +  E F     +
Sbjct: 291 GMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQ-------------IEKARELFDQMPSR 337

Query: 162 TCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIE 221
                N  +VTG    YA+C  I +A+ LF   P  ++ ++W  MI+GY+Q+G   +A+ 
Sbjct: 338 NTSSWNT-MVTG----YAQCGNIDQAKILFDEMPQ-RDCISWAAMISGYAQSGQSEEALH 391

Query: 222 CFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYA 281
            F  M+ +G   N+      L++CA ++A + G Q+HG ++ +GF+      +AL+ MY 
Sbjct: 392 LFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYG 451

Query: 282 KCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPS 341
           KCG ++ A  + E     + VSWN+MI G+AR GF KEAL+LF+ M    IK DD T   
Sbjct: 452 KCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKM-TIKPDDVTLVG 510

Query: 342 VLNCFASNIDLNNAKSVHSLIVKTGFE-------GYKFVNNA-----LIDMYAKQGNLDC 389
           VL+  +           H+  V  G E        Y    NA     +ID+  + G LD 
Sbjct: 511 VLSACS-----------HTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDE 559

Query: 390 AFMVFNLMQD----KDVISWTSLITGCAYHGSYE 419
           A    NLM+      D  +W +L+     HG  E
Sbjct: 560 A---LNLMKSMPFYPDAATWGALLGASRIHGDTE 590


>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
           [Brassica oleracea]
          Length = 968

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 267/752 (35%), Positives = 419/752 (55%), Gaps = 9/752 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N +++ Y  +G + +A ++F   P +N  +W+S+I  +S+ GL  E F L  QM 
Sbjct: 218 DVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMM 277

Query: 126 LE----GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
            +     + P   TL  VL +C+    +  G+  HG A+K   D    V   L+DMY+KC
Sbjct: 278 EKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKC 337

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG--VESNQFTFP 239
            CI +A+ +FK+  + KN V+W TM+ G+S  G   K  +  R M   G  + +++ T  
Sbjct: 338 GCINDAQVIFKL-NNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTIL 396

Query: 240 SILTACAAVSARDFGAQVHGCILSSGF-EANVYVQSALIDMYAKCGDLDSARRLLEYSEI 298
           + +  C   S      ++H   L   F   N  V +A +  YAKCG L  A R+      
Sbjct: 397 NAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRS 456

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
               SWN++I G+++    + +L  + +M +  +  D FT  S+L+  +    L   K V
Sbjct: 457 KTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEV 516

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           H LI++   E   FV  +L+ +Y   G L  A ++F+ M+DK ++SW +++ G   +G  
Sbjct: 517 HGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFP 576

Query: 419 EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSL 478
           E AL  F  M + G+ P  + + S+  AC+ L  L  G++ H   LK     +  +  S+
Sbjct: 577 ERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSV 636

Query: 479 VLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDY 538
           + +YAK G + ++ +VF+ +  R V +W A++MG   +G+ KEA++ +++M   G  PD 
Sbjct: 637 IDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDE 696

Query: 539 ITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA-KALL 597
           +TF+G+L AC+H+GL      Y + M  ++G+ P   HYAC+ID+L R+GKL EA K   
Sbjct: 697 LTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIAT 756

Query: 598 DQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWE 657
           ++M  EP   +W  LLS+CR+H +LE+GE+ A  LF  EP     YV LSN+Y+ +GKW+
Sbjct: 757 EEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWD 816

Query: 658 DAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAG 717
           +  +VR+ MK   +RK+ GCSW+E N +V  F++ +       +I S    +   I + G
Sbjct: 817 EVRKVRQRMKEMSLRKDAGCSWIELNGKVFSFVAGESSLDGFEEIKSLWSVLEREIGKMG 876

Query: 718 YVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMK 777
           Y PD +   H++ EE K   L  HSEKLA+ +GL+   +G  +R++KNLR+C DCH A K
Sbjct: 877 YRPDTSSVQHDLSEEEKTEQLRGHSEKLAITYGLIRTSEGTTLRVYKNLRICVDCHNAAK 936

Query: 778 YISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            IS V  R I++RD+ RFHHFK G CSCGDYW
Sbjct: 937 LISKVMEREIVVRDNKRFHHFKNGFCSCGDYW 968



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 205/387 (52%), Gaps = 4/387 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D++    N ++  Y+  G + +A+ +F     KN  +W++++ G+S  G   + F+L  Q
Sbjct: 321 DKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQ 380

Query: 124 MQLEG--YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCF-DLNAFVVTGLVDMYAK 180
           M   G   R  + T+ N + +C  + +L   ++ H Y++K  F   N  V    V  YAK
Sbjct: 381 MLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAK 440

Query: 181 CKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
           C  +  A  +F      K   +W  +I GYSQ+     +++ +  M+  G+  + FT  S
Sbjct: 441 CGSLSYAHRVFCSI-RSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCS 499

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           +L+AC+ + +   G +VHG I+ +  E + +V  +L+ +Y  CG+L +A  L +  E   
Sbjct: 500 LLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKT 559

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
            VSWN+M+ G+ + GF + ALSLF++M    ++  + +  SV    +    L   +  H 
Sbjct: 560 LVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHG 619

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
             +K   E   F+  ++IDMYAK G++  +F VFN ++++ V SW +++ G   HG  +E
Sbjct: 620 YALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKE 679

Query: 421 ALKYFSDMRISGICPDHVVVSSILSAC 447
           A+K F +M+ +G CPD +    +L+AC
Sbjct: 680 AIKLFEEMQRTGHCPDELTFLGVLTAC 706



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 131/411 (31%), Positives = 207/411 (50%), Gaps = 10/411 (2%)

Query: 149 LQRGEQFHGYAIKTCFDLNAFVV-TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
           +Q G + H    ++    N  V+ T ++ MY+ C    ++  +F      KN   W  +I
Sbjct: 97  IQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRK-KNLFQWNAVI 155

Query: 208 TGYSQNGYGFKAIECFRDMRVE-GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF 266
           + YS+N      +E F  M  E G+  + FTFP ++ ACA VS    G  VHG ++ +  
Sbjct: 156 SSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRL 215

Query: 267 EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK 326
             +V+V +AL+  Y   G +  A R+ +     N VSWNSMI  F+  G  +E   L  +
Sbjct: 216 VEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQ 275

Query: 327 MHARDIKI----DDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYA 382
           M  +D +I    D  T  +VL   A + ++   K VH L +K   +    VNNAL+DMY+
Sbjct: 276 MMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYS 335

Query: 383 KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG--ICPDHVVV 440
           K G ++ A ++F L  +K+V+SW +++ G +  G   +       M   G  +  D V +
Sbjct: 336 KCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTI 395

Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSSLS-VDNSLVLVYAKCGCINDANRVFDSMH 499
            + +  C E +VL   +++H   LK     +   V N+ V  YAKCG ++ A+RVF S+ 
Sbjct: 396 LNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIR 455

Query: 500 TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           ++ V +W ALI G +Q+   + +L  Y QM + G  PD  T   LL ACS 
Sbjct: 456 SKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQ 506



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 131/264 (49%), Gaps = 20/264 (7%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G +     +RD F + ++++ Y + G L  A  LF+    K   +W++++ GY   G   
Sbjct: 518 GLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPE 577

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
            A  LF QM L G +P + ++ +V   CSL   L+ G + HGYA+K   + NAF+   ++
Sbjct: 578 RALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVI 637

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNH--VAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
           DMYAK   + E+   FK+F   K     +W  M+ GY  +G   +AI+ F +M+  G   
Sbjct: 638 DMYAKNGSVMES---FKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCP 694

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCI-----LSSGFEANVYVQ--SALIDMYAKCGDL 286
           ++ TF  +LTAC      +    VH  +     + + F  N  ++  + +IDM  + G L
Sbjct: 695 DELTFLGVLTAC------NHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKL 748

Query: 287 DSARRLL--EYSEIDNEVSWNSMI 308
           D A ++   E SE      WN ++
Sbjct: 749 DEALKIATEEMSEEPGVGIWNFLL 772



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 34/144 (23%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++ +G + E+ ++F  + +R   +WN M+  Y   GR +EA KLF E             
Sbjct: 640 YAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEE------------- 686

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                             MQ  G+ P + T   VL  C+  GL+  G  +    +KT F 
Sbjct: 687 ------------------MQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLD-QMKTLFG 727

Query: 166 LNAFV--VTGLVDMYAKCKCIFEA 187
           +N  +     ++DM  +   + EA
Sbjct: 728 MNPTLKHYACVIDMLVRAGKLDEA 751


>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 738

 Score =  491 bits (1263), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 273/695 (39%), Positives = 389/695 (55%), Gaps = 39/695 (5%)

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNH-----VAWTTMI 207
           +Q H   IKT  +   FV + L+   A      +  Y   +F + + H       W ++I
Sbjct: 45  KQIHSLIIKTGLNNTVFVQSKLIHFCAVSPS-GDLSYALSLFEENQQHHKHNVFIWNSLI 103

Query: 208 TGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFE 267
            GYS +     ++  F  M   GV+ N  TFP +  +C    A   G Q+H   L     
Sbjct: 104 RGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALH 163

Query: 268 ANVYVQSALIDMYAKCGD-------------------------------LDSARRLLEYS 296
            N +V +++I MYA  G+                               LD ARRL +  
Sbjct: 164 FNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEI 223

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
            + + VSWN+MI G+ + G  +EA+  F +M   ++  +  T   VL+           K
Sbjct: 224 PVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGK 283

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            + S +   GF     + NALIDMY K G  D A  +F+ +++KDVISW ++I G +Y  
Sbjct: 284 WIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLS 343

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS-GGCSSLSVD 475
            YEEAL  F  M  S + P+ V    IL ACA L  L+ G+ VHA   K+    S+ S+ 
Sbjct: 344 LYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLW 403

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT- 534
            SL+ +YAKCGCI  A RVF SMH+R++ +W A++ G A +G  + AL  + +M+ +G  
Sbjct: 404 TSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLF 463

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAK 594
           +PD ITFVG+L AC+ AGL +    YF SM + YGI P   HY CMIDLL R+ K  EA+
Sbjct: 464 RPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAE 523

Query: 595 ALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAG 654
            L+  M  EPD  +W +LLSAC+ HG +E GE  A  LF+LEP NA  +V LSN+Y+ AG
Sbjct: 524 ILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAG 583

Query: 655 KWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIK 714
           +W+D AR+R  +  +G++K PGC+ +E +  VH F+  D+ HP   +IY  ++E+  L++
Sbjct: 584 RWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLLE 643

Query: 715 EAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHT 774
           E G+VP+ +  L++++EE KE  L+ HSEKLA++FGL+    G  IRI KNLRVCG+CH+
Sbjct: 644 ENGFVPNTSEVLYDMDEEWKEGALSQHSEKLAISFGLIKTKPGTTIRIVKNLRVCGNCHS 703

Query: 775 AMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           A K IS ++ R II RD NRFHHFK G CSC D W
Sbjct: 704 ATKLISKIFNREIIARDRNRFHHFKDGFCSCNDCW 738



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 147/485 (30%), Positives = 235/485 (48%), Gaps = 47/485 (9%)

Query: 76  AYANSGRLREAKKLFNETP---FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           A + SG L  A  LF E       N F W+SLI GYS     + +  LF +M   G +P+
Sbjct: 71  AVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPN 130

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC----------- 181
            +T   + + C+       G+Q H +A+K     N  V T ++ MYA             
Sbjct: 131 SHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFD 190

Query: 182 --------------------KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIE 221
                                C+ +A  LF   P  K+ V+W  MI+GY Q+G   +AI 
Sbjct: 191 KSSLRDAVSFTALITGYVSQGCLDDARRLFDEIP-VKDVVSWNAMISGYVQSGRFEEAIV 249

Query: 222 CFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYA 281
           CF +M+   V  N+ T   +L+AC    + + G  +   +  +GF +N+ + +ALIDMY 
Sbjct: 250 CFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYC 309

Query: 282 KCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPS 341
           KCG+ D AR L +  E  + +SWN+MI G++    ++EAL+LF+ M   ++K +D T+  
Sbjct: 310 KCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLG 369

Query: 342 VLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA-----LIDMYAKQGNLDCAFMVFNL 396
           +L+  A    L+  K VH+ I K      +  +NA     LIDMYAK G ++ A  VF  
Sbjct: 370 ILHACACLGALDLGKWVHAYIDKN----LRNSSNASLWTSLIDMYAKCGCIEAAERVFRS 425

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC-PDHVVVSSILSACAELTVLEF 455
           M  +++ SW ++++G A HG  E AL  FS+M   G+  PD +    +LSAC +  +++ 
Sbjct: 426 MHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDL 485

Query: 456 GQQVHAVFLKSGGCS-SLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
           G Q     ++  G S  L     ++ + A+     +A  +  +M    D   W +L+  C
Sbjct: 486 GHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSAC 545

Query: 514 AQNGK 518
             +G+
Sbjct: 546 KAHGR 550



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 122/379 (32%), Positives = 192/379 (50%), Gaps = 7/379 (1%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +++ GE+D A  +F+K S RD  ++  +I  Y + G L +A++LF+E P K+  +W+++I
Sbjct: 176 YASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMI 235

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            GY   G   EA   F++MQ     P++ T+  VL  C      + G+    +     F 
Sbjct: 236 SGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFG 295

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            N  +   L+DMY KC     A  LF    + K+ ++W TMI GYS      +A+  F  
Sbjct: 296 SNLQLTNALIDMYCKCGETDIARELFDGIEE-KDVISWNTMIGGYSYLSLYEEALALFEV 354

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCG 284
           M    V+ N  TF  IL ACA + A D G  VH  I  +    +N  + ++LIDMYAKCG
Sbjct: 355 MLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCG 414

Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI-KIDDFTYPSVL 343
            +++A R+       N  SWN+M+ GFA  G  + AL+LF +M  + + + DD T+  VL
Sbjct: 415 CIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVL 474

Query: 344 NCF--ASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA-FMVFNLMQDK 400
           +    A  +DL + +   S+I   G          +ID+ A+    + A  ++ N+  + 
Sbjct: 475 SACTQAGLVDLGH-QYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEP 533

Query: 401 DVISWTSLITGCAYHGSYE 419
           D   W SL++ C  HG  E
Sbjct: 534 DGAIWGSLLSACKAHGRVE 552



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 104/401 (25%), Positives = 161/401 (40%), Gaps = 73/401 (18%)

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYA--KQGNLDCAFMVFNLMQD- 399
           LN      ++N  K +HSLI+KTG     FV + LI   A    G+L  A  +F   Q  
Sbjct: 32  LNLLEKCKNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQH 91

Query: 400 --KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
              +V  W SLI G +   S   +L  FS M   G+ P+      +  +C +      G+
Sbjct: 92  HKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGK 151

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKC-------------------------------G 486
           Q+HA  LK     +  V  S++ +YA                                 G
Sbjct: 152 QLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQG 211

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
           C++DA R+FD +  +DV++W A+I G  Q+G+ +EA+  + +M      P+  T V +L 
Sbjct: 212 CLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLS 271

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLD-------- 598
           AC H    E  +W   S  +  G          +ID+  + G+   A+ L D        
Sbjct: 272 ACGHTRSGELGKW-IGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVI 330

Query: 599 ---QMVG-----------------------EPDATVWKALLSACRVHGDLELGE--RAAN 630
               M+G                       +P+   +  +L AC   G L+LG+   A  
Sbjct: 331 SWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYI 390

Query: 631 NLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
           +       NA  +  L +MY+  G  E A RV + M SR +
Sbjct: 391 DKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNL 431


>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 693

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 280/731 (38%), Positives = 406/731 (55%), Gaps = 46/731 (6%)

Query: 82  RLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDN-VL 140
           +L +A  L       +F  ++ L+   +     I+A  L   M+L  ++P    + N +L
Sbjct: 6   KLHQAIDLLYSHGLASFDDYTRLVLHCARANDFIQAKRLQSHMELNLFQPKDSFIHNQLL 65

Query: 141 RLCSLKGLLQRGEQ-FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKN 199
            L +  G L   +  F     +  +  N      L+  YAK   +     +F   P  ++
Sbjct: 66  HLYAKFGKLSDAQNVFDNMTKRDVYSWNT-----LLSAYAKMGMVENLHVVFDQMP-YRD 119

Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG 259
            V++ T+I  ++ NG+  KA++    M+ +G +  Q++  + L AC+ +     G Q+HG
Sbjct: 120 SVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIHG 179

Query: 260 CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKE 319
            I+ +    N +V++A+ DMYAKCGD+D AR L +     N VSWN MI G+ + G   E
Sbjct: 180 RIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNE 239

Query: 320 ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALID 379
            + LF +M    +K D  T  +VLN                                   
Sbjct: 240 CIHLFNEMQLSGLKPDLVTVSNVLNA---------------------------------- 265

Query: 380 MYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVV 439
            Y + G +D A  +F  +  KD I WT++I G A +G  E+A   F DM    + PD   
Sbjct: 266 -YFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYT 324

Query: 440 VSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH 499
           +SS++S+CA+L  L  GQ VH   +  G  +S+ V ++LV +Y KCG   DA  +F++M 
Sbjct: 325 ISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMP 384

Query: 500 TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW 559
            R+VITW A+I+G AQNG+  EAL  Y++M     KPD ITFVG+L AC +A + +  + 
Sbjct: 385 IRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQK 444

Query: 560 YFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVH 619
           YF+S+ + +GI P  DHYACMI LLGRSG + +A  L+  M  EP+  +W  LLS C   
Sbjct: 445 YFDSISE-HGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLSVC-AK 502

Query: 620 GDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSW 679
           GDL+  E AA++LFEL+P NA PY+ LSN+Y+  G+W+D A VR LMK +  +K    SW
Sbjct: 503 GDLKNAELAASHLFELDPRNAGPYIMLSNLYAACGRWKDVAVVRSLMKEKNAKKFAAYSW 562

Query: 680 VETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLA 739
           VE  ++VH F+SED  HP    IY +++ ++ ++++ GY PD N  LHNV EE K   ++
Sbjct: 563 VEVGNKVHRFVSEDHYHPEVGKIYGELNRLISILQQIGYNPDTNIVLHNVGEEEKFRSIS 622

Query: 740 YHSEKLAVAFGLLTLPQG-APIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHF 798
           YHSEKLA+AF L+  P G APIRI KN+RVC DCH  MK+ S    R II+RDSNRFHHF
Sbjct: 623 YHSEKLALAFALIRKPNGVAPIRIIKNIRVCDDCHVFMKFASITISRPIIMRDSNRFHHF 682

Query: 799 KAGNCSCGDYW 809
             G CSC D W
Sbjct: 683 FGGKCSCNDNW 693



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/512 (28%), Positives = 254/512 (49%), Gaps = 40/512 (7%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N+ L  ++  G++ +A  +F+ M+ RD ++WNT+++AYA  G +     +F++ P+++  
Sbjct: 62  NQLLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSV 121

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           ++++LI  +++ G   +A ++  +MQ +G++P+QY+  N L+ CS    L+ G+Q HG  
Sbjct: 122 SYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRI 181

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           +      N FV   + DMYAKC  I +A  LF    D KN V+W  MI+GY + G   + 
Sbjct: 182 VVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMID-KNVVSWNLMISGYVKMGNPNEC 240

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           I  F +M++ G++ +  T  ++L A                                   
Sbjct: 241 IHLFNEMQLSGLKPDLVTVSNVLNA----------------------------------- 265

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           Y +CG +D AR L       +E+ W +MIVG+A+ G  ++A  LF  M  R++K D +T 
Sbjct: 266 YFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTI 325

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
            S+++  A    L + + VH  +V  G +    V++AL+DMY K G    A ++F  M  
Sbjct: 326 SSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPI 385

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           ++VI+W ++I G A +G   EAL  +  M+     PD++    +LSAC    +++ GQ+ 
Sbjct: 386 RNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQKY 445

Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM-HTRDVITWTALIMGCAQNG- 517
                + G   +L     ++ +  + G ++ A  +   M H  +   W+ L+  CA+   
Sbjct: 446 FDSISEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLSVCAKGDL 505

Query: 518 -KGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
              + A     ++  R   P YI    L  AC
Sbjct: 506 KNAELAASHLFELDPRNAGP-YIMLSNLYAAC 536


>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
 gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
          Length = 710

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 245/678 (36%), Positives = 399/678 (58%), Gaps = 5/678 (0%)

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA---FVVTGLVDMYAKCKCIFEAEYLFK 192
           L+ +L++C+    L+ GE  HG+ I T     A   + +  L+++Y KC     A  +F 
Sbjct: 34  LNELLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFD 93

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV-EGVESNQFTFPSILTACAAVSAR 251
           + P+ +N V+W  M+ GY  +G+ F+ ++ F+ M   +    N+F    +  +C++    
Sbjct: 94  LMPE-RNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRI 152

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
           + G Q HGC L SG  ++ +V++ L+ MY+ C     A R+L+     +   ++S + G+
Sbjct: 153 EEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGY 212

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
              G  KE   + ++M   D+ +D+ TY S L   ++  DLN A+ +HS +V+ GF    
Sbjct: 213 LECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEV 272

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
             + A+I+MY K G +  A  VF+    ++++  T+++       S+EEAL  FS M   
Sbjct: 273 EASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTK 332

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
            + P+    +  L++ AEL++L+ G  +H + LKSG  + + V N+LV +YAK G I DA
Sbjct: 333 EVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDA 392

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
            + F  M  RD++TW  +I G + +G G+E L+ +D+M+  G  P+ ITF+G+L ACSH 
Sbjct: 393 RKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQACSHV 452

Query: 552 GLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKA 611
           G  E   +YF  + K + ++P   HY C++ LL ++G   +A+  +     E D   W+A
Sbjct: 453 GFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRA 512

Query: 612 LLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
           LL+AC V  +  LG++ A       P ++  YV LSN+++ + +WE  A VR LM  RG+
Sbjct: 513 LLNACYVRRNFRLGKKVAEYAIYKYPNDSGVYVLLSNIHAKSREWEGVAEVRSLMNKRGV 572

Query: 672 RKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEE 731
           +KEPG SW+   +Q H+F++E+  HP  T IY+KI E++  I+  GY PD+    H+V+E
Sbjct: 573 KKEPGVSWIGIRNQTHVFLAEENQHPEITLIYAKIKEVLSKIRPLGYSPDVAGVFHDVDE 632

Query: 732 EGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRD 791
           E +E  L+YHSEKLAVA+GL+  P+ +P+ + KN+R+C DCH+A+K IS +  R+I++RD
Sbjct: 633 EQREDNLSYHSEKLAVAYGLMKTPENSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRD 692

Query: 792 SNRFHHFKAGNCSCGDYW 809
           SNRFHHF+ G CSC DYW
Sbjct: 693 SNRFHHFRDGQCSCCDYW 710



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 142/492 (28%), Positives = 242/492 (49%), Gaps = 17/492 (3%)

Query: 35  PASDLNRALVDFSNS-----GEIDEAGQLFEKMSDR--DGFTWNTMIAAYANSGRLREAK 87
           P   LN  L   +NS     GE      +    S R  D +  N++I  Y   G    A+
Sbjct: 30  PIDRLNELLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRAR 89

Query: 88  KLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL-EGYRPSQYTLDNVLRLCSLK 146
           K+F+  P +N  +W +++ GY N G D E  +LF  M   +  RP+++    V + CS  
Sbjct: 90  KVFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSS 149

Query: 147 GLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTM 206
           G ++ G+QFHG  +K+    + FV   LV MY+ C    EA  +    P     V +++ 
Sbjct: 150 GRIEEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSV-FSSA 208

Query: 207 ITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF 266
           ++GY + G   +  E  R M  E +  +  T+ S L  C+ +   +   Q+H  ++  GF
Sbjct: 209 LSGYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGF 268

Query: 267 EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK 326
            + V    A+I+MY KCG +  A+R+ + +   N V   +++  + +    +EAL+LF K
Sbjct: 269 NSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSK 328

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
           M  +++  +++T+   LN  A    L +   +H L++K+G+  +  V NAL++MYAK G+
Sbjct: 329 MDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGS 388

Query: 387 LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSA 446
           ++ A   F+ M  +D+++W ++I G ++HG   E L+ F  M I+G  P+ +    +L A
Sbjct: 389 IEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQA 448

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDSMHTR---- 501
           C+ +  +E G       +K       L     +V + +K G   DA    D M T     
Sbjct: 449 CSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAE---DFMRTAPIEW 505

Query: 502 DVITWTALIMGC 513
           DV+ W AL+  C
Sbjct: 506 DVVAWRALLNAC 517



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/333 (24%), Positives = 150/333 (45%), Gaps = 18/333 (5%)

Query: 47  SNSGEIDEAGQLFEKMSDRDGFTWNT-----MIAAYANSGRLREAKKLFNETPFKNFFTW 101
           SN  +++ A Q+  +M  R GF         +I  Y   G++  A+++F+ T  +N    
Sbjct: 248 SNLRDLNLARQIHSRMV-RLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLN 306

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIK 161
           ++++  Y       EA  LF +M  +   P++YT    L   +   LL+ G+  HG  +K
Sbjct: 307 TTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLK 366

Query: 162 TCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIE 221
           + +  +  V   LV+MYAK   I +A   F      ++ V W TMI G+S +G G + +E
Sbjct: 367 SGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMT-FRDIVTWNTMICGFSHHGLGREGLE 425

Query: 222 CFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMY 280
            F  M + G   N+ TF  +L AC+ V   + G      ++     + ++   + ++ + 
Sbjct: 426 AFDRMMIAGEIPNRITFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLL 485

Query: 281 AKCGDLDSARRLLEYSEID-NEVSWNSMIVG-FARQGFHKEALSLFKKMHARDI---KID 335
           +K G    A   +  + I+ + V+W +++   + R+ F      L KK+    I     D
Sbjct: 486 SKAGMFKDAEDFMRTAPIEWDVVAWRALLNACYVRRNFR-----LGKKVAEYAIYKYPND 540

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
              Y  + N  A + +      V SL+ K G +
Sbjct: 541 SGVYVLLSNIHAKSREWEGVAEVRSLMNKRGVK 573


>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 253/623 (40%), Positives = 365/623 (58%), Gaps = 34/623 (5%)

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A Y+F    + KN V +  MI  Y  N    +A+  F+ M       + +TFP +L AC+
Sbjct: 90  ARYIFDRSLE-KNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACS 148

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            +     G QVH  I+  G + N+++ +AL+ MY KCG L  AR++L+     + VSWNS
Sbjct: 149 GLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNS 208

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           M+ G+A+ G   +AL + K+M + ++                N D     S+  ++  T 
Sbjct: 209 MVAGYAQSGQFDDALEICKEMDSLNL----------------NHDAGTMASLSPVVCYTS 252

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
            E  ++++N                 +F  M  K++ISW  +I     +    EA+  F 
Sbjct: 253 LENVQYIHN-----------------MFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFL 295

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
            M   G+ PD V ++S+L AC +L+ L  G+++H    K     +L ++N+L+ +YAKCG
Sbjct: 296 QMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCG 355

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
           C+ +A  VFD M  RDV++WT+++    ++G+G +A+  + +ML  G  PD I FV +L 
Sbjct: 356 CLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLS 415

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ACSH GL +  R YF  M + YGI P  +H+ACM+DL GR+G++ EA + + QM  EP+ 
Sbjct: 416 ACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNE 475

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
            VW ALLSACRVH  +++G  AA+ LF+L P  +  YV LSN+Y+ AG W+D   VR  M
Sbjct: 476 RVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAM 535

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFAL 726
           K  GI+K PG S VE N QVH F++ D+ HP   +IY ++D ++  +KE GY+P    AL
Sbjct: 536 KKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESAL 595

Query: 727 HNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRH 786
           H+VE E KE  LA HSEKLA+ F +L   QG PIRI KNLRVCGDCH A+K IS +  R+
Sbjct: 596 HDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRN 655

Query: 787 IILRDSNRFHHFKAGNCSCGDYW 809
           II+RD NRFHHF  G CSCGDYW
Sbjct: 656 IIVRDCNRFHHFSNGICSCGDYW 678



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 220/505 (43%), Gaps = 40/505 (7%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           ++ AY+  G    A+ +F+ +  KN   ++ +I  Y N  L +EA  +F  M    + P 
Sbjct: 77  LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
            YT   VL+ CS    L+ G Q H   +K   D N F+   LV MY KC C+ EA  +  
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
             P  ++ V+W +M+ GY+Q+G    A+E  ++M    +  +  T  S+           
Sbjct: 197 QMP-YRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASL----------- 244

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
                   +  +  E   Y+ +    M  K                 N +SWN MI  + 
Sbjct: 245 -----SPVVCYTSLENVQYIHNMFERMTKK-----------------NLISWNVMIAIYV 282

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
                 EA+SLF +M    +K D  T  S+L        L   + +H  I K   +    
Sbjct: 283 NNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLL 342

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           + NAL+DMYAK G L+ A  VF+ M+ +DV+SWTS+++     G   +A+  F+ M  SG
Sbjct: 343 LENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSG 402

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG-CSSLSVDNSLVLVYAKCGCINDA 491
             PD +   S+LSAC+   +L+ G+    +  +  G    +     +V ++ + G + +A
Sbjct: 403 QNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEA 462

Query: 492 NRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD-YITFVGLLFACS 549
                 M    +   W AL+  C  + K    L   D +     K   Y   +  ++A  
Sbjct: 463 YSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYA-- 520

Query: 550 HAGLAENARWYFESMDKVYGIKPGP 574
            AG+ ++      +M K+ GIK  P
Sbjct: 521 KAGMWKDVMNVRYAMKKI-GIKKVP 544



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 164/370 (44%), Gaps = 54/370 (14%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D + F  N ++A Y   G LREA+K+ ++ P+++  +W+S++ GY+  G   +A E+  +
Sbjct: 169 DTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKE 228

Query: 124 M---QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK 180
           M    L     +  +L  V+   SL+ +                                
Sbjct: 229 MDSLNLNHDAGTMASLSPVVCYTSLENV-------------------------------- 256

Query: 181 CKCIFEAEYLFKMFP--DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTF 238
                  +Y+  MF     KN ++W  MI  Y  N    +A+  F  M   G++ +  T 
Sbjct: 257 -------QYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTI 309

Query: 239 PSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI 298
            S+L AC  +SA   G ++H  I     + N+ +++AL+DMYAKCG L+ AR + +   +
Sbjct: 310 ASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRL 369

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
            + VSW SM+  + R G   +A++LF KM       D   + SVL+  +    L+  +  
Sbjct: 370 RDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHY 429

Query: 359 HSLIVKTGFEGYKFVNN-----ALIDMYAKQGNLDCAFMVFNLM-QDKDVISWTSLITGC 412
             ++     E Y  V        ++D++ + G ++ A+     M  + +   W +L++ C
Sbjct: 430 FRMMT----EQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSAC 485

Query: 413 AYHGSYEEAL 422
             H   +  L
Sbjct: 486 RVHSKMDIGL 495



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 167/374 (44%), Gaps = 33/374 (8%)

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH-SLIVKTGF 367
           V   R  F +  + +F K  A ++ +D +     LN   S I +N    +  +L +K   
Sbjct: 21  VSLTRIRFDRLKVEVFSK-EACEVILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIK--- 76

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
                    L+  Y+ QG    A  +F+   +K+V+ +  +I     +  Y EAL  F  
Sbjct: 77  ---------LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQV 127

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           M      PDH     +L AC+ L  L  G QVH   +K G  ++L + N+LV +Y KCGC
Sbjct: 128 MLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGC 187

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           + +A +V D M  RDV++W +++ G AQ+G+  +AL+   +M +     D  T   L   
Sbjct: 188 LREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPV 247

Query: 548 CSHAGLAENARW---YFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG-- 602
             +  L EN ++    FE M K   I      +  MI +   +    EA +L  QM    
Sbjct: 248 VCYTSL-ENVQYIHNMFERMTKKNLIS-----WNVMIAIYVNNSMPNEAVSLFLQMEECG 301

Query: 603 -EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSN----MYSTAGKWE 657
            +PDA    +LL AC     L LG R       +E  N  P + L N    MY+  G  E
Sbjct: 302 MKPDAVTIASLLPACGDLSALFLGRRLHK---YIEKGNLQPNLLLENALLDMYAKCGCLE 358

Query: 658 DAARVRKLMKSRGI 671
           +A  V   M+ R +
Sbjct: 359 EARDVFDKMRLRDV 372



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 135/308 (43%), Gaps = 40/308 (12%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREA------------- 86
           N  +  +   G + EA ++ ++M  RD  +WN+M+A YA SG+  +A             
Sbjct: 176 NALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLN 235

Query: 87  ------------------------KKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFW 122
                                     +F     KN  +W+ +I  Y N  +  EA  LF 
Sbjct: 236 HDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFL 295

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           QM+  G +P   T+ ++L  C     L  G + H Y  K     N  +   L+DMYAKC 
Sbjct: 296 QMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCG 355

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
           C+ EA  +F      ++ V+WT+M++ Y ++G G+ A+  F  M   G   +   F S+L
Sbjct: 356 CLEEARDVFDKM-RLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVL 414

Query: 243 TACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-N 300
           +AC+     D G      +    G    +   + ++D++ + G+++ A   ++   ++ N
Sbjct: 415 SACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPN 474

Query: 301 EVSWNSMI 308
           E  W +++
Sbjct: 475 ERVWGALL 482


>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
          Length = 624

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 240/573 (41%), Positives = 366/573 (63%), Gaps = 1/573 (0%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
            + + +TACA     D   ++HG + SS FE + ++ ++LI +Y KCG +  A ++ +  
Sbjct: 53  VYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKM 112

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              + VSW S+I G+A+     EA+ L   M     K + FT+ S+L    +  D     
Sbjct: 113 RKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGG 172

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H+L VK  +    +V +AL+DMYA+ G +D A  VF+ +  K+ +SW +LI+G A  G
Sbjct: 173 QIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKG 232

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
             E AL  F++M+ +G    H   SSI S  A +  LE G+ VHA  +KS    +  V N
Sbjct: 233 DGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGN 292

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           +++ +YAK G + DA +VF+ +  +D++TW +++   AQ G GKEA+  +++M   G   
Sbjct: 293 TMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYL 352

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           + ITF+ +L ACSH GL +  + YF+ M K Y ++P  +HY  ++DLLGR+G L  A   
Sbjct: 353 NQITFLCILTACSHGGLVKEGKHYFD-MIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVF 411

Query: 597 LDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
           + +M  EP A VW ALL+ACR+H + ++G+ AA+++F+L+P ++ P V L N+Y++ G W
Sbjct: 412 IFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHW 471

Query: 657 EDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA 716
           + AARVRK+MK+ G++KEP CSWVE  + VH+F++ D  HP   +IY   DEI + I++ 
Sbjct: 472 DAAARVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDEISMKIRKE 531

Query: 717 GYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAM 776
           GYVPDM++ L +V+E+ +E  L YHSEK+A+AF L+ +P GA IRI KN+R+CGDCH+A 
Sbjct: 532 GYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSAF 591

Query: 777 KYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           KYIS V+ R I++RD+NRFHHF  G+CSCGDYW
Sbjct: 592 KYISKVFEREIVVRDTNRFHHFSNGSCSCGDYW 624



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/391 (30%), Positives = 200/391 (51%), Gaps = 2/391 (0%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+       +  C+    L    + HG+   + F+ +AF+   L+ +Y KC  + EA  +
Sbjct: 49  PTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKV 108

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F      K+ V+WT++I GY+QN    +AI     M     + N FTF S+L A  A + 
Sbjct: 109 FDKMRK-KDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYAD 167

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              G Q+H   +   +  +VYV SAL+DMYA+CG +D A  + +  +  N VSWN++I G
Sbjct: 168 SGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISG 227

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           FAR+G  + AL +F +M     +   FTY S+ +  A    L   K VH+ +VK+  +  
Sbjct: 228 FARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLT 287

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
            FV N ++DMYAK G++  A  VF  + +KD+++W S++T  A +G  +EA+ +F +MR 
Sbjct: 288 AFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRK 347

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
           SGI  + +    IL+AC+   +++ G+    +  +      +    ++V +  + G +N 
Sbjct: 348 SGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNY 407

Query: 491 ANR-VFDSMHTRDVITWTALIMGCAQNGKGK 520
           A   +F          W AL+  C  +   K
Sbjct: 408 ALVFIFKMPMEPTAAVWGALLAACRMHKNAK 438



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 187/374 (50%), Gaps = 6/374 (1%)

Query: 47  SNSGEIDEA----GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWS 102
           + S  +D+A    G L     + D F  N++I  Y   G + EA K+F++   K+  +W+
Sbjct: 62  AQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDMVSWT 121

Query: 103 SLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT 162
           SLI GY+   +  EA  L   M    ++P+ +T  ++L+          G Q H  A+K 
Sbjct: 122 SLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKC 181

Query: 163 CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIEC 222
            +  + +V + L+DMYA+C  +  A  +F    D KN V+W  +I+G+++ G G  A+  
Sbjct: 182 DWHEDVYVGSALLDMYARCGKMDMATAVFDKL-DSKNGVSWNALISGFARKGDGETALMV 240

Query: 223 FRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK 282
           F +M+  G E+  FT+ SI +  A + A + G  VH  ++ S  +   +V + ++DMYAK
Sbjct: 241 FAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAK 300

Query: 283 CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
            G +  AR++ E     + V+WNSM+  FA+ G  KEA+S F++M    I ++  T+  +
Sbjct: 301 SGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCI 360

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM-VFNLMQDKD 401
           L   +    +   K    +I +   E        ++D+  + G L+ A + +F +  +  
Sbjct: 361 LTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPT 420

Query: 402 VISWTSLITGCAYH 415
              W +L+  C  H
Sbjct: 421 AAVWGALLAACRMH 434



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 148/306 (48%), Gaps = 7/306 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +  + ++  YA  G++  A  +F++   KN  +W++LI G++  G    A  +F +MQ
Sbjct: 186 DVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQ 245

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G+  + +T  ++    +  G L++G+  H + +K+   L AFV   ++DMYAK   + 
Sbjct: 246 RNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMI 305

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A  +F+   + K+ V W +M+T ++Q G G +A+  F +MR  G+  NQ TF  ILTAC
Sbjct: 306 DARKVFERVLN-KDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTAC 364

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-W 304
           +       G      I     E  +     ++D+  + G L+ A   +    ++   + W
Sbjct: 365 SHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVW 424

Query: 305 NSMIVGFARQGFHKEA-LSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLI 362
            +++   A    HK A +  F   H   +  DD   P +L N +AS    + A  V  ++
Sbjct: 425 GALL---AACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMM 481

Query: 363 VKTGFE 368
             TG +
Sbjct: 482 KATGVK 487



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 8/194 (4%)

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
           + P   V  + ++ACA+   L+  +++H     S       +DNSL+ +Y KCG + +A+
Sbjct: 47  LAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAH 106

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC---S 549
           +VFD M  +D+++WT+LI G AQN    EA+     ML    KP+  TF  LL A    +
Sbjct: 107 KVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYA 166

Query: 550 HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
            +G+           D    +  G    + ++D+  R GK+  A A+ D++    +   W
Sbjct: 167 DSGIGGQIHALAVKCDWHEDVYVG----SALLDMYARCGKMDMATAVFDKL-DSKNGVSW 221

Query: 610 KALLSACRVHGDLE 623
            AL+S     GD E
Sbjct: 222 NALISGFARKGDGE 235



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 14/217 (6%)

Query: 25  YTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRL 83
           + H V +  K  + +   ++D ++ SG + +A ++FE++ ++D  TWN+M+ A+A  G  
Sbjct: 276 HAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLG 335

Query: 84  REAKKLFNETP----FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
           +EA   F E      + N  T+  ++   S+ GL  E    F  ++     P       V
Sbjct: 336 KEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTV 395

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV---DMYAKCKC-IFEAEYLFKMFP 195
           + L    GLL     F     K   +  A V   L+    M+   K   F A+++F++ P
Sbjct: 396 VDLLGRAGLLNYALVF---IFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDP 452

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
           D          I  Y+  G+   A    + M+  GV+
Sbjct: 453 DDSGPPVLLYNI--YASTGHWDAAARVRKMMKATGVK 487


>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 260/721 (36%), Positives = 393/721 (54%), Gaps = 45/721 (6%)

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           L+ + P  + L ++L  C     LQ   Q H  AIK   + N  +   ++     C C  
Sbjct: 11  LKSFSPPTHPLISLLETCESMDQLQ---QVHCQAIKKGLNANPVLQNRVMTF---C-CTH 63

Query: 186 E------AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFP 239
           E      A  LF   P+  N   W TMI GYS+  +    +  + +M   GV+ +++TFP
Sbjct: 64  EYGDFQYARRLFDEIPE-PNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFP 122

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
            +        A ++G Q+HG +L  G + NV+V +AL+ MY  CG LD+AR + +     
Sbjct: 123 FLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKA 182

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           + ++WN +I  + + G  +E+  LF  M  + +     T   VL+  +   DL   K VH
Sbjct: 183 DVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVH 242

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS-- 417
           S +     E    + NA+IDMYA  G +D A  +F  M ++D+ISWT++++G    G   
Sbjct: 243 SYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEID 302

Query: 418 -----------------------------YEEALKYFSDMRISGICPDHVVVSSILSACA 448
                                        ++EAL+ F +M+ + + PD   + S+L+ACA
Sbjct: 303 VARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACA 362

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
            L  LE G+ +     ++   + L V N+L+ +Y KCG ++ A  +F  M  RD  TWTA
Sbjct: 363 HLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTA 422

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
           +I+G A NG G++AL  +  ML     PD IT++G+L AC+H GL +  R YF  M   +
Sbjct: 423 MIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQH 482

Query: 569 GIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
           GI+P   HY C++DLL R+G+L EA  +++ M  + ++ VW ALL+ CRV+ + ++ E  
Sbjct: 483 GIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMV 542

Query: 629 ANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHI 688
              + ELEP N   YV L N+Y+   +W D   +R++M  +GI+K PGCS +E N +VH 
Sbjct: 543 VKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHE 602

Query: 689 FISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVA 748
           F++ DR HP   +I +K+D++   +K AGY PD++    ++ EE KE  +  HSEKLA+A
Sbjct: 603 FVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIA 662

Query: 749 FGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDY 808
           FGL+  P G  IRI KNLR+C DCH   K +S VY R +I+RD  RFHHFK G CSC DY
Sbjct: 663 FGLINSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDY 722

Query: 809 W 809
           W
Sbjct: 723 W 723



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 162/548 (29%), Positives = 262/548 (47%), Gaps = 46/548 (8%)

Query: 81  GRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVL 140
           G  + A++LF+E P  N F W+++I GYS          L+ +M   G +P +YT   + 
Sbjct: 66  GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 125

Query: 141 RLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNH 200
           +  +    L+ G Q HG+ +K     N FV T LV MY  C  +  A  +F + P   + 
Sbjct: 126 KGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKA-DV 184

Query: 201 VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
           + W  +I+ Y++ G   ++   F  M  + V     T   +L+AC+ +     G +VH  
Sbjct: 185 ITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSY 244

Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSA---------RRLLEYS----------EID-- 299
           + +   E+N+ +++A+IDMYA CG++DSA         R ++ ++          EID  
Sbjct: 245 VKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVA 304

Query: 300 ----------NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
                     + VSW +MI G+ R    KEAL LF+ M A ++K D+FT  SVL   A  
Sbjct: 305 RNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHL 364

Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
             L   + + + I +   +   FV NALIDMY K G++D A  +F  M  +D  +WT++I
Sbjct: 365 GALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMI 424

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
            G A +G  E+AL  FS+M  + I PD +    +LSAC    +++ G++         G 
Sbjct: 425 VGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGI 484

Query: 470 S-SLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYD 527
             +++    LV + A+ G + +A  V ++M  + + I W AL+ GC    +   A     
Sbjct: 485 EPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVK 544

Query: 528 QMLARGTKPD----YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDL 583
           Q+L    +PD    Y+    +  AC         R     MDK  GIK  P     +I++
Sbjct: 545 QILE--LEPDNGAVYVLLCNIYAACKRWNDLRELRQMM--MDK--GIKKTPG--CSLIEM 596

Query: 584 LGRSGKLI 591
            GR  + +
Sbjct: 597 NGRVHEFV 604



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 207/447 (46%), Gaps = 42/447 (9%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F    ++  Y   G+L  A+ +F+  P  +  TW+ +I  Y+  G   E+  LF  M+ +
Sbjct: 154 FVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDK 213

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK----- 182
              P+  TL  VL  CS    L+ G++ H Y      + N  +   ++DMYA C      
Sbjct: 214 QVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSA 273

Query: 183 -CIFE-------------------------AEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
             IF                          A   F   P+ K++V+WT MI GY ++   
Sbjct: 274 LGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPE-KDYVSWTAMIDGYIRSNRF 332

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
            +A+E FR+M+   V+ ++FT  S+LTACA + A + G  +   I  +  + +++V++AL
Sbjct: 333 KEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNAL 392

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           IDMY KCGD+D A  +       ++ +W +MIVG A  G  ++AL +F  M    I  D+
Sbjct: 393 IDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDE 452

Query: 337 FTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
            TY  VL+ C  + +     K    +  + G E        L+D+ A+ G L  A+ V  
Sbjct: 453 ITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIE 512

Query: 396 LMQDK-DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD----HVVVSSILSACAEL 450
            M  K + I W +L+ GC  +   E  +      +I  + PD    +V++ +I +AC   
Sbjct: 513 NMPIKANSIVWGALLAGCRVY--RESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRW 570

Query: 451 TVLEFGQQ--VHAVFLKSGGCSSLSVD 475
             L   +Q  +     K+ GCS + ++
Sbjct: 571 NDLRELRQMMMDKGIKKTPGCSLIEMN 597



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 160/308 (51%), Gaps = 6/308 (1%)

Query: 8   ILNFSLRCRSKIIGPARYTHNVGNSVKPASDL--NRALVD-FSNSGEIDEAGQLFEKMSD 64
           +L  S   + K +   +  H+   + K  S+L    A++D +++ GE+D A  +F  M++
Sbjct: 223 VLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNN 282

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           RD  +W T+++ + N G +  A+  F++ P K++ +W+++I GY       EA ELF  M
Sbjct: 283 RDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNM 342

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
           Q    +P ++T+ +VL  C+  G L+ GE    Y  +     + FV   L+DMY KC  +
Sbjct: 343 QATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDV 402

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            +AE +F+     ++   WT MI G + NG+G KA++ F +M    +  ++ T+  +L+A
Sbjct: 403 DKAESIFREMSQ-RDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSA 461

Query: 245 CAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEV 302
           C      D G +    + S  G E N+     L+D+ A+ G L  A  ++E   I  N +
Sbjct: 462 CTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSI 521

Query: 303 SWNSMIVG 310
            W +++ G
Sbjct: 522 VWGALLAG 529


>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
          Length = 1286

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 245/566 (43%), Positives = 357/566 (63%), Gaps = 2/566 (0%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEAN-VYVQSALIDMYAKCGDLDSARRLLEYS 296
           +  +L  C  +   + G  VH  ++ S F  N + +Q+ +++MYAKCG LD ARR+ +  
Sbjct: 90  YSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEM 149

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              + V+W ++I GF++    ++AL LF +M     + + FT  S+L    S   L+   
Sbjct: 150 PTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGT 209

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H+  +K G++   +V +AL+DMYA+ G++D A + F+ M  K  +SW +LI+G A  G
Sbjct: 210 QLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKG 269

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
             E AL     M+     P H   SS+LSACA +  LE G+ VHA  +KSG      + N
Sbjct: 270 EGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGN 329

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           +L+ +YAK G I+DA RVFD +   DV++W  ++ GCAQ+G GKE L  ++QML  G +P
Sbjct: 330 TLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEP 389

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           + I+F+ +L ACSH+GL +   +YFE M K Y ++P   HY   +DLLGR G L  A+  
Sbjct: 390 NEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLLGRVGLLDRAERF 448

Query: 597 LDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
           + +M  EP A VW ALL ACR+H ++ELG  AA   FEL+P ++ P + LSN+Y++AG+W
Sbjct: 449 IREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRW 508

Query: 657 EDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA 716
            D A+VRK+MK  G++K+P CSWVE  + VH+F++ D  HP   +I  K +EI   IKE 
Sbjct: 509 RDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPRIKEIRGKWEEISGKIKEI 568

Query: 717 GYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAM 776
           GYVPD +  L  V+++ +E  L YHSEKLA+AF LL  P G+PIRI KN+RVCGDCH A+
Sbjct: 569 GYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAAI 628

Query: 777 KYISAVYLRHIILRDSNRFHHFKAGN 802
           K++S V  R II+RD+NRFH F+ G+
Sbjct: 629 KFVSKVVDREIIVRDTNRFHRFRDGS 654



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/377 (34%), Positives = 204/377 (54%), Gaps = 3/377 (0%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL-VDMYAKCKCIFEAEYLFKMFPDG 197
           +L+ C+  G +++G   H + + + F  N  V+  + V+MYAKC C+ +A  +F   P  
Sbjct: 93  LLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMP-T 151

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           K+ V WT +I G+SQN     A+  F  M   G + N FT  S+L A  +    D G Q+
Sbjct: 152 KDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQL 211

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           H   L  G++++VYV SAL+DMYA+CG +D+A+   +     +EVSWN++I G AR+G  
Sbjct: 212 HAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEG 271

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
           + AL L  KM  ++ +   FTY SVL+  AS   L   K VH+ ++K+G +   F+ N L
Sbjct: 272 EHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTL 331

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           +DMYAK G++D A  VF+ +   DV+SW +++TGCA HG  +E L  F  M   GI P+ 
Sbjct: 332 LDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNE 391

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
           +    +L+AC+   +L+ G     +  K      +    + V +  + G ++ A R    
Sbjct: 392 ISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIRE 451

Query: 498 MHTRDV-ITWTALIMGC 513
           M        W AL+  C
Sbjct: 452 MPIEPTAAVWGALLGAC 468



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 184/350 (52%), Gaps = 2/350 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++  YA  G L +A+++F+E P K+  TW++LI G+S      +A  LF QM   G++
Sbjct: 127 NIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQ 186

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+ +TL ++L+    +  L  G Q H + +K  +  + +V + LVDMYA+C  +  A+  
Sbjct: 187 PNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLA 246

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P  K+ V+W  +I+G+++ G G  A+     M+ +  +   FT+ S+L+ACA++ A
Sbjct: 247 FDGMP-TKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGA 305

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            + G  VH  ++ SG +   ++ + L+DMYAK G +D A+R+ +     + VSWN+M+ G
Sbjct: 306 LEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTG 365

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
            A+ G  KE L  F++M    I+ ++ ++  VL   + +  L+       L+ K   E  
Sbjct: 366 CAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPD 425

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYE 419
                  +D+  + G LD A      M  +     W +L+  C  H + E
Sbjct: 426 VPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNME 475



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 152/306 (49%), Gaps = 11/306 (3%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           +  + ++  YA  G +  A+  F+  P K+  +W++LI G++  G    A  L W+MQ +
Sbjct: 225 YVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRK 284

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
            ++P+ +T  +VL  C+  G L++G+  H + IK+   L AF+   L+DMYAK   I +A
Sbjct: 285 NFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDA 344

Query: 188 EYLFKMF--PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           + +F     PD    V+W TM+TG +Q+G G + ++ F  M   G+E N+ +F  +LTAC
Sbjct: 345 KRVFDRLVKPDV---VSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTAC 401

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           +     D G      +     E +V      +D+  + G LD A R +    I+   +  
Sbjct: 402 SHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVW 461

Query: 306 SMIVGFARQGFHKE-ALSLFKKMHARDIKIDDFTYPSVL--NCFASNIDLNNAKSVHSLI 362
             ++G  R   HK   L ++    A ++   D + P +L  N +AS     +   V  ++
Sbjct: 462 GALLGACR--MHKNMELGVYAAERAFELDPHD-SGPRMLLSNIYASAGRWRDVAKVRKMM 518

Query: 363 VKTGFE 368
            ++G +
Sbjct: 519 KESGVK 524



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 164/336 (48%), Gaps = 35/336 (10%)

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALI------DMYAKQGNLDCAFMVFNLMQDKDV 402
           N  L NA  +  ++V++   G+  ++          D   + G+   +F VF   QDKD+
Sbjct: 5   NSTLFNAAVIRKILVRSPPSGFATIHAPAAPFSDSNDSEVEDGDA-ASFCVF---QDKDL 60

Query: 403 ISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAV 462
           +  +    G    G Y   L     ++   + PD+ + S +L  C  L  +E G+ VHA 
Sbjct: 61  LRKSQSDGGT---GLYALDL-----IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAH 112

Query: 463 FLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKE 521
            + S    + L + N +V +YAKCGC++DA R+FD M T+D++TWTALI G +QN + ++
Sbjct: 113 LVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRD 172

Query: 522 ALQFYDQMLARGTKPDYITFVGLLFAC-SHAGLAENARWYFESMDKVYGIKPGPDHYACM 580
           AL  + QML  G +P++ T   LL A  S  GL    + +   +   YG +      + +
Sbjct: 173 ALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLK--YGYQSSVYVGSAL 230

Query: 581 IDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNA 640
           +D+  R G +  A+   D M  + + + W AL+S     G+   GE A + L++++  N 
Sbjct: 231 VDMYARCGHMDAAQLAFDGMPTKSEVS-WNALISGHARKGE---GEHALHLLWKMQRKNF 286

Query: 641 MP-YVQLSNMYST--------AGKWEDAARVRKLMK 667
            P +   S++ S          GKW  A  ++  +K
Sbjct: 287 QPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLK 322



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 38/184 (20%), Positives = 71/184 (38%), Gaps = 32/184 (17%)

Query: 25  YTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRL 83
           + H + + +K  + +   L+D ++ +G ID+A ++F+++   D  +WNTM+         
Sbjct: 313 HAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLT-------- 364

Query: 84  REAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLC 143
                                  G + +GL  E  + F QM   G  P++ +   VL  C
Sbjct: 365 -----------------------GCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTAC 401

Query: 144 SLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAW 203
           S  GLL  G  +     K   + +       VD+  +   +  AE   +  P       W
Sbjct: 402 SHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVW 461

Query: 204 TTMI 207
             ++
Sbjct: 462 GALL 465


>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 253/623 (40%), Positives = 365/623 (58%), Gaps = 34/623 (5%)

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A Y+F    + KN V +  MI  Y  N    +A+  F+ M       + +TFP +L AC+
Sbjct: 90  ARYIFDRSLE-KNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACS 148

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            +     G QVH  I+  G + N+++ +AL+ MY KCG L  AR++L+     + VSWNS
Sbjct: 149 GLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNS 208

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           M+ G+A+ G   +AL + K+M + ++                N D     S+  ++  T 
Sbjct: 209 MVAGYAQSGQFDDALEICKEMDSLNL----------------NHDAGTMASLSPVVCYTS 252

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
            E  ++++N                 +F  M  K++ISW  +I     +    EA+  F 
Sbjct: 253 LENVQYIHN-----------------MFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFL 295

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
            M   G+ PD V ++S+L AC +L+ L  G+++H    K     +L ++N+L+ +YAKCG
Sbjct: 296 QMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCG 355

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
           C+ +A  VFD M  RDV++WT+++    ++G+G +A+  + +ML  G  PD I FV +L 
Sbjct: 356 CLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLS 415

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ACSH GL +  R YF  M + YGI P  +H+ACM+DL GR+G++ EA + + QM  EP+ 
Sbjct: 416 ACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNE 475

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
            VW ALLSACRVH  +++G  AA+ LF+L P  +  YV LSN+Y+ AG W+D   VR  M
Sbjct: 476 RVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAM 535

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFAL 726
           K  GI+K PG S VE N QVH F++ D+ HP   +IY ++D ++  +KE GY+P    AL
Sbjct: 536 KKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESAL 595

Query: 727 HNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRH 786
           H+VE E KE  LA HSEKLA+ F +L   QG PIRI KNLRVCGDCH A+K IS +  R+
Sbjct: 596 HDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRN 655

Query: 787 IILRDSNRFHHFKAGNCSCGDYW 809
           II+RD NRFHHF  G CSCGDYW
Sbjct: 656 IIVRDCNRFHHFSNGICSCGDYW 678



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 219/505 (43%), Gaps = 40/505 (7%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           ++ AY+  G    A+ +F+ +  KN   ++ +I  Y N  L +EA  +F  M    + P 
Sbjct: 77  LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
            YT   VL+ CS    L+ G Q H   +K   D N F+   LV MY KC C+ EA  +  
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
             P  ++ V+W +M+ GY+Q+G    A+E  ++M    +  +  T  S+           
Sbjct: 197 QMP-YRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASL----------- 244

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
                   +  +  E   Y+ +    M  K                 N +SWN MI  + 
Sbjct: 245 -----SPVVCYTSLENVQYIHNMFERMTKK-----------------NLISWNVMIAIYV 282

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
                 EA+SLF +M    +K D  T  S+L        L   + +H  I K        
Sbjct: 283 NNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLL 342

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           + NAL+DMYAK G L+ A  VF+ M+ +DV+SWTS+++     G   +A+  F+ M  SG
Sbjct: 343 LENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSG 402

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG-CSSLSVDNSLVLVYAKCGCINDA 491
             PD +   S+LSAC+   +L+ G+    +  +  G    +     +V ++ + G + +A
Sbjct: 403 QNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEA 462

Query: 492 NRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD-YITFVGLLFACS 549
                 M    +   W AL+  C  + K    L   D +     K   Y   +  ++A  
Sbjct: 463 YSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYA-- 520

Query: 550 HAGLAENARWYFESMDKVYGIKPGP 574
            AG+ ++      +M K+ GIK  P
Sbjct: 521 KAGMWKDVMNVRYAMKKI-GIKKVP 544



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 163/370 (44%), Gaps = 54/370 (14%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D + F  N ++A Y   G LREA+K+ ++ P+++  +W+S++ GY+  G   +A E+  +
Sbjct: 169 DTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKE 228

Query: 124 M---QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK 180
           M    L     +  +L  V+   SL+ +                                
Sbjct: 229 MDSLNLNHDAGTMASLSPVVCYTSLENV-------------------------------- 256

Query: 181 CKCIFEAEYLFKMFP--DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTF 238
                  +Y+  MF     KN ++W  MI  Y  N    +A+  F  M   G++ +  T 
Sbjct: 257 -------QYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTI 309

Query: 239 PSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI 298
            S+L AC  +SA   G ++H  I       N+ +++AL+DMYAKCG L+ AR + +   +
Sbjct: 310 ASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRL 369

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
            + VSW SM+  + R G   +A++LF KM       D   + SVL+  +    L+  +  
Sbjct: 370 RDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHY 429

Query: 359 HSLIVKTGFEGYKFVNN-----ALIDMYAKQGNLDCAFMVFNLM-QDKDVISWTSLITGC 412
             ++     E Y  V        ++D++ + G ++ A+     M  + +   W +L++ C
Sbjct: 430 FRMMT----EQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSAC 485

Query: 413 AYHGSYEEAL 422
             H   +  L
Sbjct: 486 RVHSKMDIGL 495



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 168/375 (44%), Gaps = 33/375 (8%)

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH-SLIVKTG 366
           IV   R  F +  + +F K  A ++ +D +     LN   S I +N    +  +L +K  
Sbjct: 20  IVSSTRIRFDRLKVEVFSK-EACEVILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIK-- 76

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
                     L+  Y+ QG    A  +F+   +K+V+ +  +I     +  Y EAL  F 
Sbjct: 77  ----------LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQ 126

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
            M      PDH     +L AC+ L  L  G QVH   +K G  ++L + N+LV +Y KCG
Sbjct: 127 VMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCG 186

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
           C+ +A +V D M  RDV++W +++ G AQ+G+  +AL+   +M +     D  T   L  
Sbjct: 187 CLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSP 246

Query: 547 ACSHAGLAENARW---YFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG- 602
              +  L EN ++    FE M K   I      +  MI +   +    EA +L  QM   
Sbjct: 247 VVCYTSL-ENVQYIHNMFERMTKKNLIS-----WNVMIAIYVNNSMPNEAVSLFLQMEEC 300

Query: 603 --EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSN----MYSTAGKW 656
             +PDA    +LL AC     L LG R       +E  N  P + L N    MY+  G  
Sbjct: 301 GMKPDAVTIASLLPACGDLSALFLGRRLHK---YIEKGNLRPNLLLENALLDMYAKCGCL 357

Query: 657 EDAARVRKLMKSRGI 671
           E+A  V   M+ R +
Sbjct: 358 EEARDVFDKMRLRDV 372



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 135/308 (43%), Gaps = 40/308 (12%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREA------------- 86
           N  +  +   G + EA ++ ++M  RD  +WN+M+A YA SG+  +A             
Sbjct: 176 NALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLN 235

Query: 87  ------------------------KKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFW 122
                                     +F     KN  +W+ +I  Y N  +  EA  LF 
Sbjct: 236 HDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFL 295

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           QM+  G +P   T+ ++L  C     L  G + H Y  K     N  +   L+DMYAKC 
Sbjct: 296 QMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCG 355

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
           C+ EA  +F      ++ V+WT+M++ Y ++G G+ A+  F  M   G   +   F S+L
Sbjct: 356 CLEEARDVFDKM-RLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVL 414

Query: 243 TACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-N 300
           +AC+     D G      +    G    +   + ++D++ + G+++ A   ++   ++ N
Sbjct: 415 SACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPN 474

Query: 301 EVSWNSMI 308
           E  W +++
Sbjct: 475 ERVWGALL 482


>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Vitis vinifera]
          Length = 755

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 253/666 (37%), Positives = 394/666 (59%), Gaps = 3/666 (0%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
            + +  S  D    N ++  Y     L++A+K+F+  P +N  +W+S+I GYS  G    
Sbjct: 88  HMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGN 147

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
           A E ++QM   G  P Q+T  ++++ CS  G +  G Q H + +K+ F  +      L+ 
Sbjct: 148 ALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALIS 207

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE-SNQ 235
           MY K   I +A  +F      ++ ++W +MI G+SQ GY  +A+  F++M  +GV   N+
Sbjct: 208 MYTKSNLIIDALDVFSRMAT-RDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNE 266

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
           F F S+ +AC+++   ++G Q+HG  +  G   +V+   +L DMYAKCG L  AR +   
Sbjct: 267 FIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQ 326

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               + V+WN++I GFA  G  KEA++ F +M  + +  D+ T  S+L    S  +L   
Sbjct: 327 IGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQG 386

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAY 414
             VH  I K G +    V N L+ MYAK   L  A   F  M+ + D++SW +++T C  
Sbjct: 387 MQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMR 446

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
           H   EE  +    M IS   PD++ ++++L A AE   +E G QVH   LK+G     SV
Sbjct: 447 HDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSV 506

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
            N L+ +YAKCG +  A+++FDSM   DV++W++LI+G AQ G G+EAL+ +  M     
Sbjct: 507 TNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDV 566

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAK 594
           KP+++TFVG+L ACSH GL E     + +M+K +GI P  +H +CM+DLL R+G L EA+
Sbjct: 567 KPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAE 626

Query: 595 ALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAG 654
             + QM  +PD  VWK LL+AC+ HG++++G+RAA N+ +++P N+  +V L N+Y++ G
Sbjct: 627 GFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLLCNIYASKG 686

Query: 655 KWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIK 714
            WED AR+R LMK RG+RK PG SW+E   ++H+F  ED  HP R  IY+ ++E++L + 
Sbjct: 687 NWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFFVEDSLHPERNKIYTMLEELLLQML 746

Query: 715 EAGYVP 720
           +AGYVP
Sbjct: 747 DAGYVP 752



 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 165/505 (32%), Positives = 266/505 (52%), Gaps = 15/505 (2%)

Query: 115 IEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
           I+AFE F Q +  G+  +  T   ++  CS    L+ G++ H + +K+    +  +   +
Sbjct: 47  IKAFE-FLQKK-TGFCLTLSTYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHI 104

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           ++MY KCK + +A+ +F   P+ +N V+WT++I GYSQNG G  A+E +  M   GV  +
Sbjct: 105 LNMYGKCKSLKDAQKVFDAMPE-RNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPD 163

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
           QFTF SI+ AC+++     G Q+H  +L S F A++  Q+ALI MY K   +  A  +  
Sbjct: 164 QFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFS 223

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKI-DDFTYPSVLNCFASNIDLN 353
                + +SW SMI GF++ G+  EAL  FK+M  + + + ++F + SV +  +S +   
Sbjct: 224 RMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPE 283

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
             + +H + +K G     F   +L DMYAK G L CA +VF  +   D+++W ++I G A
Sbjct: 284 YGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFA 343

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
           Y G  +EA+ +FS MR  G+ PD + V S+L AC   + L  G QVH    K G    + 
Sbjct: 344 YGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVP 403

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
           V N+L+ +YAKC  + DA   F+ M    D+++W A++  C ++ + +E  +    M   
Sbjct: 404 VCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCIS 463

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC----MIDLLGRSG 588
             +PDYIT   +L A      AE       +    Y +K G +        +IDL  + G
Sbjct: 464 QHRPDYITLTNVLGAS-----AETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCG 518

Query: 589 KLIEAKALLDQMVGEPDATVWKALL 613
            L  A  + D M+  PD   W +L+
Sbjct: 519 SLKTAHKIFDSMI-NPDVVSWSSLI 542



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 201/388 (51%), Gaps = 2/388 (0%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           T+  +++AC+ + + + G ++H  +L S    ++ +Q+ +++MY KC  L  A+++ +  
Sbjct: 65  TYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAM 124

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              N VSW S+I G+++ G    AL  + +M    +  D FT+ S++   +S  D+   +
Sbjct: 125 PERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGR 184

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H+ ++K+ F  +    NALI MY K   +  A  VF+ M  +D+ISW S+I G +  G
Sbjct: 185 QLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLG 244

Query: 417 SYEEALKYFSDMRISGI-CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
              EAL YF +M   G+  P+  +  S+ SAC+ L   E+G+Q+H + +K G    +   
Sbjct: 245 YELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAG 304

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
            SL  +YAKCG ++ A  VF  +   D++ W A+I G A  G  KEA+ F+ QM  +G  
Sbjct: 305 CSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLI 364

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           PD IT   LL AC+              ++K+ G+         ++ +  +  +L +A  
Sbjct: 365 PDEITVRSLLCACTSPSELYQGMQVHGYINKM-GLDLDVPVCNTLLTMYAKCSELRDAIF 423

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLE 623
             ++M    D   W A+L+AC  H   E
Sbjct: 424 FFEEMRCNADLVSWNAILTACMRHDQAE 451



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 167/330 (50%), Gaps = 8/330 (2%)

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNIDLNN 354
           S++  E S N  I    +Q    EA+  F+ +  +    +   TY  +++  +    L +
Sbjct: 22  SKLRAEQSSNEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEH 81

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
            K +H  ++K+       + N +++MY K  +L  A  VF+ M +++V+SWTS+I G + 
Sbjct: 82  GKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQ 141

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
           +G    AL+++  M  SG+ PD     SI+ AC+ L  +  G+Q+HA  LKS   + +  
Sbjct: 142 NGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIA 201

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
            N+L+ +Y K   I DA  VF  M TRD+I+W ++I G +Q G   EAL ++ +ML +G 
Sbjct: 202 QNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGV 261

Query: 535 K-PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA--CMIDLLGRSGKLI 591
             P+   F  +  ACS     E  R     M   +G+  G D +A   + D+  + G L 
Sbjct: 262 YLPNEFIFGSVFSACSSLLQPEYGR-QLHGMSIKFGL--GRDVFAGCSLCDMYAKCGLLS 318

Query: 592 EAKALLDQMVGEPDATVWKALLSACRVHGD 621
            A+ +  Q +G PD   W A+++     GD
Sbjct: 319 CARVVFYQ-IGRPDLVAWNAIIAGFAYGGD 347



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/210 (21%), Positives = 84/210 (40%), Gaps = 35/210 (16%)

Query: 8   ILNFSLRCRSKIIGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRD 66
           +L  S    S  IG   + + +   +   + +   L+D ++  G +  A ++F+ M + D
Sbjct: 475 VLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPD 534

Query: 67  GFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL 126
             +W+++I  YA                           +GY       EA +LF  M+ 
Sbjct: 535 VVSWSSLILGYAQ--------------------------FGYGE-----EALKLFKTMRR 563

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV--VTGLVDMYAKCKCI 184
              +P+  T   VL  CS  GL++ G + +G   K  F +       + +VD+ A+  C+
Sbjct: 564 LDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKE-FGIAPTREHCSCMVDLLARAGCL 622

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
            EAE          + V W T++     +G
Sbjct: 623 NEAEGFIHQMAFDPDIVVWKTLLAACKTHG 652


>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 260/721 (36%), Positives = 393/721 (54%), Gaps = 45/721 (6%)

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           L+ + P  + L ++L  C     LQ   Q H  AIK   + N  +   ++     C C  
Sbjct: 32  LKSFSPPTHPLISLLETCESMDQLQ---QVHCQAIKKGLNANPVLQNRVMTF---C-CTH 84

Query: 186 E------AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFP 239
           E      A  LF   P+  N   W TMI GYS+  +    +  + +M   GV+ +++TFP
Sbjct: 85  EYGDFQYARRLFDEIPE-PNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFP 143

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
            +        A ++G Q+HG +L  G + NV+V +AL+ MY  CG LD+AR + +     
Sbjct: 144 FLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKA 203

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           + ++WN +I  + + G  +E+  LF  M  + +     T   VL+  +   DL   K VH
Sbjct: 204 DVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVH 263

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS-- 417
           S +     E    + NA+IDMYA  G +D A  +F  M ++D+ISWT++++G    G   
Sbjct: 264 SYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEID 323

Query: 418 -----------------------------YEEALKYFSDMRISGICPDHVVVSSILSACA 448
                                        ++EAL+ F +M+ + + PD   + S+L+ACA
Sbjct: 324 VARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACA 383

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
            L  LE G+ +     ++   + L V N+L+ +Y KCG ++ A  +F  M  RD  TWTA
Sbjct: 384 HLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTA 443

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
           +I+G A NG G++AL  +  ML     PD IT++G+L AC+H GL +  R YF  M   +
Sbjct: 444 MIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQH 503

Query: 569 GIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
           GI+P   HY C++DLL R+G+L EA  +++ M  + ++ VW ALL+ CRV+ + ++ E  
Sbjct: 504 GIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMV 563

Query: 629 ANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHI 688
              + ELEP N   YV L N+Y+   +W D   +R++M  +GI+K PGCS +E N +VH 
Sbjct: 564 VKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHE 623

Query: 689 FISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVA 748
           F++ DR HP   +I +K+D++   +K AGY PD++    ++ EE KE  +  HSEKLA+A
Sbjct: 624 FVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIA 683

Query: 749 FGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDY 808
           FGL+  P G  IRI KNLR+C DCH   K +S VY R +I+RD  RFHHFK G CSC DY
Sbjct: 684 FGLINSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDY 743

Query: 809 W 809
           W
Sbjct: 744 W 744



 Score =  229 bits (583), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 162/548 (29%), Positives = 262/548 (47%), Gaps = 46/548 (8%)

Query: 81  GRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVL 140
           G  + A++LF+E P  N F W+++I GYS          L+ +M   G +P +YT   + 
Sbjct: 87  GDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLF 146

Query: 141 RLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNH 200
           +  +    L+ G Q HG+ +K     N FV T LV MY  C  +  A  +F + P   + 
Sbjct: 147 KGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKA-DV 205

Query: 201 VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
           + W  +I+ Y++ G   ++   F  M  + V     T   +L+AC+ +     G +VH  
Sbjct: 206 ITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSY 265

Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSA---------RRLLEYS----------EID-- 299
           + +   E+N+ +++A+IDMYA CG++DSA         R ++ ++          EID  
Sbjct: 266 VKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVA 325

Query: 300 ----------NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
                     + VSW +MI G+ R    KEAL LF+ M A ++K D+FT  SVL   A  
Sbjct: 326 RNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHL 385

Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
             L   + + + I +   +   FV NALIDMY K G++D A  +F  M  +D  +WT++I
Sbjct: 386 GALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMI 445

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
            G A +G  E+AL  FS+M  + I PD +    +LSAC    +++ G++         G 
Sbjct: 446 VGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGI 505

Query: 470 S-SLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYD 527
             +++    LV + A+ G + +A  V ++M  + + I W AL+ GC    +   A     
Sbjct: 506 EPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVK 565

Query: 528 QMLARGTKPD----YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDL 583
           Q+L    +PD    Y+    +  AC         R     MDK  GIK  P     +I++
Sbjct: 566 QILE--LEPDNGAVYVLLCNIYAACKRWNDLRELRQMM--MDK--GIKKXPG--CSLIEM 617

Query: 584 LGRSGKLI 591
            GR  + +
Sbjct: 618 NGRVHEFV 625



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 206/447 (46%), Gaps = 42/447 (9%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F    ++  Y   G+L  A+ +F+  P  +  TW+ +I  Y+  G   E+  LF  M+ +
Sbjct: 175 FVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDK 234

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK----- 182
              P+  TL  VL  CS    L+ G++ H Y      + N  +   ++DMYA C      
Sbjct: 235 QVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSA 294

Query: 183 -CIFE-------------------------AEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
             IF                          A   F   P+ K++V+WT MI GY ++   
Sbjct: 295 LGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPE-KDYVSWTAMIDGYIRSNRF 353

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
            +A+E FR+M+   V+ ++FT  S+LTACA + A + G  +   I  +  + +++V++AL
Sbjct: 354 KEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNAL 413

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           IDMY KCGD+D A  +       ++ +W +MIVG A  G  ++AL +F  M    I  D+
Sbjct: 414 IDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDE 473

Query: 337 FTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
            TY  VL+ C  + +     K    +  + G E        L+D+ A+ G L  A+ V  
Sbjct: 474 ITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIE 533

Query: 396 LMQDK-DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD----HVVVSSILSACAEL 450
            M  K + I W +L+ GC  +   E  +      +I  + PD    +V++ +I +AC   
Sbjct: 534 NMPIKANSIVWGALLAGCRVY--RESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRW 591

Query: 451 TVLEFGQQ--VHAVFLKSGGCSSLSVD 475
             L   +Q  +     K  GCS + ++
Sbjct: 592 NDLRELRQMMMDKGIKKXPGCSLIEMN 618



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 160/308 (51%), Gaps = 6/308 (1%)

Query: 8   ILNFSLRCRSKIIGPARYTHNVGNSVKPASDL--NRALVD-FSNSGEIDEAGQLFEKMSD 64
           +L  S   + K +   +  H+   + K  S+L    A++D +++ GE+D A  +F  M++
Sbjct: 244 VLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNN 303

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           RD  +W T+++ + N G +  A+  F++ P K++ +W+++I GY       EA ELF  M
Sbjct: 304 RDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNM 363

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
           Q    +P ++T+ +VL  C+  G L+ GE    Y  +     + FV   L+DMY KC  +
Sbjct: 364 QATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDV 423

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            +AE +F+     ++   WT MI G + NG+G KA++ F +M    +  ++ T+  +L+A
Sbjct: 424 DKAESIFREMSQ-RDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSA 482

Query: 245 CAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEV 302
           C      D G +    + S  G E N+     L+D+ A+ G L  A  ++E   I  N +
Sbjct: 483 CTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSI 542

Query: 303 SWNSMIVG 310
            W +++ G
Sbjct: 543 VWGALLAG 550


>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 264/693 (38%), Positives = 394/693 (56%), Gaps = 37/693 (5%)

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYA--KCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
           +Q H   ++T    + F  + L+   A      +  A+ +F   P   N   W T+I  Y
Sbjct: 52  KQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPH-PNLYTWNTLIRAY 110

Query: 211 SQNGYGFKAIECFRDMRVEGVE-SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
           + +    +++  F  M  +  +  ++FTFP ++ A + +     G   HG ++     ++
Sbjct: 111 ASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSD 170

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA 329
           V++ ++LI  YAKCG+L    R+       + VSWNSMI  F + G  +EAL LF++M  
Sbjct: 171 VFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMET 230

Query: 330 RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDC 389
           +++K +  T   VL+  A   D    + VHS I +        ++NA++DMY K G+++ 
Sbjct: 231 QNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVED 290

Query: 390 AFMVFNLMQDKDVISWTSLITGCAYHGSYE------------------------------ 419
           A  +F+ M +KD++SWT+++ G A  G Y+                              
Sbjct: 291 AKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKP 350

Query: 420 -EALKYFSDMRISGIC-PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
            EAL+ F ++++S    PD V + S LSACA+L  ++ G  +H    K G   +  +  S
Sbjct: 351 KEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTS 410

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
           L+ +Y KCG +  A  VF S+  +DV  W+A+I G A +G GK+A+  + +M     KP+
Sbjct: 411 LIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPN 470

Query: 538 YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALL 597
            +TF  +L ACSH GL E  R +F  M+ VYG+ PG  HYACM+D+LGR+G L EA  L+
Sbjct: 471 AVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELI 530

Query: 598 DQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWE 657
           ++M   P A+VW ALL AC +H ++ L E+A + L ELEP N   YV LSN+Y+ AGKW+
Sbjct: 531 EKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWD 590

Query: 658 DAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAG 717
             + +RKLM+  G++KEPGCS +E +  VH F+  D  HP    IY+K+DEI+  ++  G
Sbjct: 591 RVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIG 650

Query: 718 YVPDMNFALHNVEEEG-KEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAM 776
           YVP+ +  L  VEEE  KE  L  HSEKLA+AFGL++  Q  PIRI KNLRVCGDCH+  
Sbjct: 651 YVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKNLRVCGDCHSVA 710

Query: 777 KYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           K +S +Y R I+LRD  RFHHF+ G+CSC DYW
Sbjct: 711 KLVSKLYDREILLRDRYRFHHFREGHCSCMDYW 743



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/486 (28%), Positives = 242/486 (49%), Gaps = 38/486 (7%)

Query: 66  DGFTWNTMIAAYANSG--RLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D F+ + +I A A S    L  A+++F++ P  N +TW++LI  Y++     ++  +F +
Sbjct: 66  DPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLR 125

Query: 124 MQLEGYR-PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           M  +    P ++T   +++  S    L  G+ FHG  IK     + F++  L+  YAKC 
Sbjct: 126 MLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCG 185

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            +     +F   P  ++ V+W +MIT + Q G   +A+E F++M  + V+ N  T   +L
Sbjct: 186 ELGLGYRVFVNIPR-RDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVL 244

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           +ACA  S  +FG  VH  I  +    ++ + +A++DMY KCG ++ A+RL +     + V
Sbjct: 245 SACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIV 304

Query: 303 SWNSMIVGFARQGFH-------------------------------KEALSLFKKMH-AR 330
           SW +M+VG+A+ G +                               KEAL LF ++  ++
Sbjct: 305 SWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSK 364

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
             K D+ T  S L+  A    ++    +H  I K G +    +  +LIDMY K G+L  A
Sbjct: 365 TAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKA 424

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
            MVF+ ++ KDV  W+++I G A HG  ++A+  FS M+   + P+ V  ++IL AC+ +
Sbjct: 425 LMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHV 484

Query: 451 TVLEFGQQ-VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT-WTA 508
            ++E G+   + + L  G    +     +V +  + G + +A  + + M      + W A
Sbjct: 485 GLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGA 544

Query: 509 LIMGCA 514
           L+  C 
Sbjct: 545 LLGACT 550



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 217/466 (46%), Gaps = 55/466 (11%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G + + +   D F  N++I  YA  G L    ++F   P ++  +W+S+I  +   G   
Sbjct: 160 GMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPE 219

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA ELF +M+ +  +P+  T+  VL  C+ K   + G   H Y  +     +  +   ++
Sbjct: 220 EALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAML 279

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYS------------------------ 211
           DMY KC  + +A+ LF   P+ K+ V+WTTM+ GY+                        
Sbjct: 280 DMYTKCGSVEDAKRLFDKMPE-KDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWN 338

Query: 212 -------QNGYGFKAIECFRDMRV-EGVESNQFTFPSILTACAAVSARDFGAQVHGCILS 263
                  Q G   +A+E F ++++ +  + ++ T  S L+ACA + A D G  +H  I  
Sbjct: 339 ALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKK 398

Query: 264 SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSL 323
            G + N ++ ++LIDMY KCGDL  A  +    E  +   W++MI G A  G  K+A++L
Sbjct: 399 QGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIAL 458

Query: 324 FKKMHARDIKIDDFTYPSVLNCFASNIDL--------NNAKSVHSLIVKTGFEGYKFVNN 375
           F KM    +K +  T+ ++L C  S++ L        N  + V+ ++   G + Y     
Sbjct: 459 FSKMQEDKVKPNAVTFTNIL-CACSHVGLVEEGRTFFNQMELVYGVL--PGVKHYA---- 511

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSY---EEALKYFSDMRIS 431
            ++D+  + G L+ A  +   M      S W +L+  C  H +    E+A     ++   
Sbjct: 512 CMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELE-P 570

Query: 432 GICPDHVVVSSILSACAEL-TVLEFGQQVHAVFL-KSGGCSSLSVD 475
           G    +V++S+I +   +   V    + +  V L K  GCSS+ VD
Sbjct: 571 GNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVD 616



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 150/294 (51%), Gaps = 13/294 (4%)

Query: 24  RYTHNV--GNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANS 80
           R+ H+    N +  +  L+ A++D ++  G +++A +LF+KM ++D  +W TM+  YA  
Sbjct: 257 RWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKI 316

Query: 81  GRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL-EGYRPSQYTLDNV 139
           G    A+ +F+  P ++   W++LI  Y   G   EA ELF ++QL +  +P + TL + 
Sbjct: 317 GEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVST 376

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKN 199
           L  C+  G +  G   H Y  K    LN  + T L+DMY KC  + +A  +F    + K+
Sbjct: 377 LSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSV-ERKD 435

Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV----SARDFGA 255
              W+ MI G + +G+G  AI  F  M+ + V+ N  TF +IL AC+ V      R F  
Sbjct: 436 VFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFN 495

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMI 308
           Q+    L  G    V   + ++D+  + G L+ A  L+E   +    S W +++
Sbjct: 496 QME---LVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALL 546


>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 249/663 (37%), Positives = 387/663 (58%), Gaps = 1/663 (0%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
            D F  +++I  YA +G L +A+ LF+  P K+   W+ ++ GY   G    A ++F +M
Sbjct: 91  EDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEM 150

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
           +    +P+  T   VL +C+ + +L  G Q HG A+    +L++ V   L+ MY+KC+C+
Sbjct: 151 RHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCL 210

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
             A  LF   P   + V+W  +I+GY QNG   +A   FR M   G++ +  TF S L  
Sbjct: 211 QAARKLFDTSPQ-SDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPC 269

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
              + +     ++HG I+      +V+++SALID+Y KC D++ A+++L  S   + V  
Sbjct: 270 VNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVC 329

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
            +MI G+   G +KEAL  F+ +    +K    T+ S+   FA    LN  K +H  I+K
Sbjct: 330 TTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIK 389

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
           T  +    V +A++DMYAK G LD A  VFN + +KD I W S+IT C+ +G   EA+  
Sbjct: 390 TKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINL 449

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           F  M + G   D V +S  LSACA L  L +G+++H + +K    S L  ++SL+ +YAK
Sbjct: 450 FRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAK 509

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG +N + RVFD M  R+ ++W ++I     +G  KE L  + +ML  G +PD++TF+G+
Sbjct: 510 CGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGI 569

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           + AC HAG  +    Y+  M + YGI    +HYAC+ D+ GR+G+L EA   ++ M   P
Sbjct: 570 ISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPP 629

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
           DA VW  LL AC +HG++EL E A+ +LF+L+P+N+  YV L+N+ + AGKW    +VR 
Sbjct: 630 DAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRS 689

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
           +MK RG+RK PG SW+E N+  H+F++ D  HPL   IYS +D ++L +K+ GYVP +  
Sbjct: 690 IMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKEGYVPQLYL 749

Query: 725 ALH 727
            +H
Sbjct: 750 PMH 752



 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 171/552 (30%), Positives = 281/552 (50%), Gaps = 13/552 (2%)

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
           Y  +G L++AK LF          W+ +I G++  G    A   + +M   G  P +YT 
Sbjct: 2   YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTF 61

Query: 137 DNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD 196
             V++ C     ++ G+  H          + FV + L+ +YA+   + +A+YLF   P 
Sbjct: 62  PYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQ 121

Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
            K+ V W  M+ GY +NG    AI+ F +MR   ++ N  TF  +L+ CA+ +  D G Q
Sbjct: 122 -KDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           +HG  +S G E +  V + L+ MY+KC  L +AR+L + S   + VSWN +I G+ + G 
Sbjct: 181 LHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGL 240

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
             EA  LF+ M +  IK D  T+ S L C    + L + K +H  I++       F+ +A
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSA 300

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           LID+Y K  +++ A  +       D +  T++I+G   +G  +EAL+ F  +    + P 
Sbjct: 301 LIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPT 360

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFD 496
            V  SSI  A A L  L  G+++H   +K+       V ++++ +YAKCG ++ A RVF+
Sbjct: 361 SVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFN 420

Query: 497 SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAEN 556
            +  +D I W ++I  C+QNG+  EA+  + QM   GT+ D ++  G L AC++      
Sbjct: 421 RITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHY 480

Query: 557 ARWYFESMDKVYGIKPGP---DHYA--CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKA 611
            +     M K      GP   D YA   +ID+  + G L  ++ + D+M  E +   W +
Sbjct: 481 GKEIHGLMIK------GPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRM-QERNEVSWNS 533

Query: 612 LLSACRVHGDLE 623
           ++SA   HGDL+
Sbjct: 534 IISAYGNHGDLK 545



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 226/473 (47%), Gaps = 19/473 (4%)

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           MY +   + +A+ LF     G    AW  MI G++  G    A+  +  M   GV  +++
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTS-AWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKY 59

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           TFP ++ AC  + +   G  VH  +   G + +V+V S+LI +YA+ G L  A+ L +  
Sbjct: 60  TFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              + V WN M+ G+ + G    A+ +F +M   +IK +  T+  VL+  AS   L+   
Sbjct: 120 PQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H + V  G E    V N L+ MY+K   L  A  +F+     D++SW  +I+G   +G
Sbjct: 180 QLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNG 239

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
              EA   F  M  +GI PD +  +S L    EL  L+  +++H   ++      + + +
Sbjct: 240 LMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKS 299

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           +L+ +Y KC  +  A ++     + D +  T +I G   NGK KEAL+ +  ++    KP
Sbjct: 300 ALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKP 359

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPGPDHY----ACMIDLLGRSGKL 590
             +TF  +  A   AGLA           +++G  IK   D      + ++D+  + G+L
Sbjct: 360 TSVTFSSIFPA--FAGLAA-----LNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRL 412

Query: 591 IEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPY 643
             A  + ++ + E DA  W +++++C  +G    GE  A NLF    M    Y
Sbjct: 413 DLACRVFNR-ITEKDAICWNSMITSCSQNG--RPGE--AINLFRQMGMEGTRY 460



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 111/235 (47%), Gaps = 2/235 (0%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G + +   D      + ++  YA  GRL  A ++FN    K+   W+S+I   S  G   
Sbjct: 385 GSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPG 444

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  LF QM +EG R    ++   L  C+    L  G++ HG  IK     + +  + L+
Sbjct: 445 EAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLI 504

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMYAKC  +  +  +F    + +N V+W ++I+ Y  +G   + +  F +M   G++ + 
Sbjct: 505 DMYAKCGNLNFSRRVFDRMQE-RNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDH 563

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSA 289
            TF  I++AC      D G + +  +    G  A +   + + DM+ + G LD A
Sbjct: 564 VTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEA 618



 Score = 44.7 bits (104), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 40/59 (67%), Gaps = 3/59 (5%)

Query: 37  SDL--NRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE 92
           SDL    +L+D ++  G ++ + ++F++M +R+  +WN++I+AY N G L+E   LF+E
Sbjct: 495 SDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHE 553


>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
          Length = 624

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 243/573 (42%), Positives = 363/573 (63%), Gaps = 1/573 (0%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
            + S +TACA     +   ++H  + SS F  + ++ ++LI MY KC  +  AR + +  
Sbjct: 53  VYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQM 112

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              + VSW S+I G+A+     EA+ L   M     K + FT+ S+L    +  D    +
Sbjct: 113 RRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGR 172

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H+L VK G+    +V +AL+DMYA+ G +D A  VF+ +  K+ +SW +LI+G A  G
Sbjct: 173 QIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKG 232

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
             E AL  F++M  +G    H   SS+ S+ A L  LE G+ VHA  +KS    +  V N
Sbjct: 233 DGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGN 292

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           +L+ +YAK G + DA +VFD +  +D++TW +++   AQ G GKEA+  +++M   G   
Sbjct: 293 TLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYL 352

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           + ITF+ +L ACSH GL +  + YFE M K Y ++P  DHY  ++ LLGR+G L  A   
Sbjct: 353 NQITFLCILTACSHGGLVKEGKRYFEMM-KEYDLEPEIDHYVTVVALLGRAGLLNYALVF 411

Query: 597 LDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
           + +M  EP A VW ALL+ACR+H + ++G+ AA+++FEL+P ++ P V L N+Y++ G+W
Sbjct: 412 IFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQW 471

Query: 657 EDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA 716
           + AARVR +MK+ G++KEP CSWVE  + VH+F++ D  HP   +IY    EI   I++ 
Sbjct: 472 DAAARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQAEEIYKMWGEISKKIRKE 531

Query: 717 GYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAM 776
           GYVPDM++ L +V+++ KE  L YHSEKLA+AF L+ +P GA IRI KN+R+CGDCH+A 
Sbjct: 532 GYVPDMDYVLLHVDDQEKEANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAF 591

Query: 777 KYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           KYIS V+ R I++RD+NRFHHF +G+CSCGDYW
Sbjct: 592 KYISKVFGREIVVRDTNRFHHFSSGSCSCGDYW 624



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 120/391 (30%), Positives = 203/391 (51%), Gaps = 2/391 (0%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+     + +  C+    L+   + H +   + F  +AF+   L+ MY KC+ + +A  +
Sbjct: 49  PTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNV 108

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F      K+ V+WT++I GY+QN    +AI     M     + N FTF S+L A  A + 
Sbjct: 109 FDQMRR-KDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYAD 167

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              G Q+H   +  G+  +VYV SAL+DMYA+CG +D A  + +  +  N VSWN++I G
Sbjct: 168 SGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISG 227

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           FAR+G  + AL  F +M     +   FTY SV +  A    L   K VH+ ++K+  +  
Sbjct: 228 FARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLT 287

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
            FV N L+DMYAK G++  A  VF+ + +KD+++W S++T  A +G  +EA+ +F +MR 
Sbjct: 288 AFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRK 347

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
           SG+  + +    IL+AC+   +++ G++   +  +      +    ++V +  + G +N 
Sbjct: 348 SGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHYVTVVALLGRAGLLNY 407

Query: 491 ANR-VFDSMHTRDVITWTALIMGCAQNGKGK 520
           A   +F          W AL+  C  +   K
Sbjct: 408 ALVFIFKMPMEPTAAVWGALLAACRMHKNAK 438



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 178/351 (50%), Gaps = 2/351 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N++I  Y     + +A+ +F++   K+  +W+SLI GY+   + +EA  L   M 
Sbjct: 85  DAFLDNSLIHMYCKCRSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGML 144

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
              ++P+ +T  ++L+          G Q H  A+K  +  + +V + L+DMYA+C  + 
Sbjct: 145 KGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMD 204

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A  +F    D KN V+W  +I+G+++ G G  A+  F +M   G E+  FT+ S+ ++ 
Sbjct: 205 MATAVFDKL-DSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSI 263

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A + A + G  VH  ++ S  +   +V + L+DMYAK G +  AR++ +  +  + V+WN
Sbjct: 264 ARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWN 323

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           SM+  FA+ G  KEA+S F++M    + ++  T+  +L   +    +   K    ++ + 
Sbjct: 324 SMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKEY 383

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFM-VFNLMQDKDVISWTSLITGCAYH 415
             E        ++ +  + G L+ A + +F +  +     W +L+  C  H
Sbjct: 384 DLEPEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMH 434



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 146/317 (46%), Gaps = 29/317 (9%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +  + ++  YA  G++  A  +F++   KN  +W++LI G++  G    A   F +M 
Sbjct: 186 DVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAEML 245

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G+  + +T  +V    +  G L++G+  H + IK+   L AFV   L+DMYAK   + 
Sbjct: 246 RNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMI 305

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A  +F    D K+ V W +M+T ++Q G G +A+  F +MR  GV  NQ TF  ILTAC
Sbjct: 306 DARKVFDRV-DNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTAC 364

Query: 246 AAVSARDFGAQVHGCILSSG---FE-ANVYVQSALIDMYAKCGDLDSARRLLEYSEI--- 298
           +           HG ++  G   FE    Y     ID Y     L     LL Y+ +   
Sbjct: 365 S-----------HGGLVKEGKRYFEMMKEYDLEPEIDHYVTVVALLGRAGLLNYALVFIF 413

Query: 299 -----DNEVSWNSMIVGFARQGFHKEA-LSLFKKMHARDIKIDDFTYPSVL-NCFASNID 351
                     W +++   A    HK A +  F   H  ++  DD   P +L N +AS   
Sbjct: 414 KMPMEPTAAVWGALL---AACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQ 470

Query: 352 LNNAKSVHSLIVKTGFE 368
            + A  V  ++  TG +
Sbjct: 471 WDAAARVRMMMKTTGVK 487



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 97/207 (46%), Gaps = 13/207 (6%)

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
           + P   V  S ++ACA+   LE  +++HA    S       +DNSL+ +Y KC  + DA 
Sbjct: 47  LAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDAR 106

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
            VFD M  +D+++WT+LI G AQN    EA+     ML    KP+  TF  LL A     
Sbjct: 107 NVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYA 166

Query: 553 LAENARWYFESMDKVYGIKPG--PDHY--ACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
            +   R           +K G   D Y  + ++D+  R GK+  A A+ D++    +   
Sbjct: 167 DSGTGRQI-----HALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKL-DSKNGVS 220

Query: 609 WKALLSACRVHGDLELGERAANNLFEL 635
           W AL+S     GD   GE A     E+
Sbjct: 221 WNALISGFARKGD---GESALMTFAEM 244



 Score = 47.0 bits (110), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 12/181 (6%)

Query: 25  YTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRL 83
           + H + +  K  + +   L+D ++ SG + +A ++F+++ ++D  TWN+M+ A+A  G  
Sbjct: 276 HAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLG 335

Query: 84  REAKKLFNETP----FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
           +EA   F E      + N  T+  ++   S+ GL  E    F  M+     P       V
Sbjct: 336 KEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHYVTV 395

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV---DMYAKCKC-IFEAEYLFKMFP 195
           + L    GLL     F     K   +  A V   L+    M+   K   F A+++F++ P
Sbjct: 396 VALLGRAGLLNYALVF---IFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDP 452

Query: 196 D 196
           D
Sbjct: 453 D 453


>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 822

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 251/660 (38%), Positives = 394/660 (59%), Gaps = 1/660 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D + +    +I  YA  G +  A  +F+  P KN  TW+++I GYS  G    A ELF +
Sbjct: 146 DGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGK 205

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M L+G RP ++ L + +  CS  G L+ G Q HGYA +   + +A V+  L+D+Y KC  
Sbjct: 206 MGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSR 265

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +  A  LF    + +N V+WTTMI GY QN    +A+  F  +  EG + + F   SIL 
Sbjct: 266 LSLARKLFDCM-ENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILN 324

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           +C +++A   G QVH   + +  E++ YV+++LIDMYAKC  L  AR + E    D+ +S
Sbjct: 325 SCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAIS 384

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           +N+MI G++R G    A+ +F KM    +K    T+ S+L   +S   +  +K +H LIV
Sbjct: 385 YNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIV 444

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K+G     +  ++LID+Y+K   ++ A  VFNLM ++D++ W ++I G A +   EEA+K
Sbjct: 445 KSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVK 504

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            F+ +++SG+ P+     ++++  + L  +  GQQ HA  +K+G  S   V N+L+ +YA
Sbjct: 505 LFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYA 564

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG I +   +F+S   +DVI W ++I   AQ+G+ +EAL  +  M   G +P+Y+TFVG
Sbjct: 565 KCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVG 624

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           +L AC+HAGL +    +F+ M   Y I+PG +HYA +++L GRSGKL  AK  +++M  E
Sbjct: 625 VLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIE 684

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
           P A VW++LLSAC + G++E+G  A       +P ++ P V +SN+Y++ G W DA ++R
Sbjct: 685 PAAAVWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASRGLWSDAQKLR 744

Query: 664 KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMN 723
           + M   G+ KEPG SW+E   +VH FI+  R HP    IYS +DE+  ++K  GY+PD +
Sbjct: 745 QGMDCAGVVKEPGYSWIEVMKEVHTFIARGREHPEADVIYSLLDELTSILKNGGYLPDTS 804



 Score =  332 bits (850), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 204/623 (32%), Positives = 328/623 (52%), Gaps = 25/623 (4%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELF--WQ 123
           D F  N ++ AY+  GR+R+A++LF+  P KN  +W S I  ++ +G + +A  LF  +Q
Sbjct: 45  DLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCEEDAVALFAAFQ 104

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
               G  P+++ L + LR C+    +  G+Q HG A++   D N +V T L+++YAK  C
Sbjct: 105 RASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGC 164

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I  A  +F   P  KN V WT +ITGYSQ G G  A+E F  M ++GV  ++F   S ++
Sbjct: 165 IDAAMLVFDALPV-KNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVS 223

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC+A+   + G Q HG       E +  V +ALID+Y KC  L  AR+L +  E  N VS
Sbjct: 224 ACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVS 283

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           W +MI G+ +     EA+++F ++     + D F   S+LN   S   +   + VH+  +
Sbjct: 284 WTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAI 343

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K   E  ++V N+LIDMYAK  +L  A  VF  + + D IS+ ++I G +  G    A+ 
Sbjct: 344 KANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAID 403

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            FS MR   + P  +   S+L   +  + +E  +Q+H + +KSG    L   +SL+ VY+
Sbjct: 404 VFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYS 463

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           K   + DA  VF+ MH RD++ W A+I G AQN +G+EA++ ++Q+   G  P+  TFV 
Sbjct: 464 KFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVA 523

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGP--DHYA--CMIDLLGRSGKLIEAKALLDQ 599
           L+   S      + + +   +     IK G   DH+    +ID+  + G + E + L + 
Sbjct: 524 LVTVASTLVSMFHGQQFHAQI-----IKAGADSDHHVSNALIDMYAKCGFIKEGRLLFES 578

Query: 600 MVGEPDATVWKALLSACRVHGDLELGERAANNLFEL------EPMNAMPYVQLSNMYSTA 653
            +G+ D   W +++S    HG  E     A  +F +      EP N + +V + +  + A
Sbjct: 579 TLGK-DVICWNSMISTYAQHGQAE----EALYVFRMMGGTGVEP-NYVTFVGVLSACAHA 632

Query: 654 GKWEDAARVRKLMKSRGIRKEPG 676
           G  ++  R    MK++    EPG
Sbjct: 633 GLVDEGLRHFDFMKTK-YAIEPG 654



 Score =  242 bits (618), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 140/461 (30%), Positives = 244/461 (52%), Gaps = 5/461 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G  +    + D    N +I  Y    RL  A+KLF+    +N  +W+++I GY     D 
Sbjct: 239 GYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDA 298

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  +FWQ+  EG++P  +   ++L  C     + +G Q H +AIK   + + +V   L+
Sbjct: 299 EAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLI 358

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMYAKC+ + EA  +F+   +  + +++  MI GYS+ G    AI+ F  MR   ++ + 
Sbjct: 359 DMYAKCEHLTEARAVFEALAE-DDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSP 417

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            TF S+L   ++ SA +   Q+HG I+ SG   ++Y  S+LID+Y+K   ++ A+ +   
Sbjct: 418 LTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNL 477

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               + V WN+MI G A+    +EA+ LF ++    +  ++FT+ +++   ++ + + + 
Sbjct: 478 MHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHG 537

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           +  H+ I+K G +    V+NALIDMYAK G +    ++F     KDVI W S+I+  A H
Sbjct: 538 QQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQH 597

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G  EEAL  F  M  +G+ P++V    +LSACA   +++ G + H  F+K+        +
Sbjct: 598 GQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAHAGLVDEGLR-HFDFMKTKYAIEPGTE 656

Query: 476 N--SLVLVYAKCGCINDANRVFDSMHTRD-VITWTALIMGC 513
           +  S+V ++ + G ++ A    + M        W +L+  C
Sbjct: 657 HYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVWRSLLSAC 697



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 157/509 (30%), Positives = 255/509 (50%), Gaps = 24/509 (4%)

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGY 215
           H  A+ T    + F+   L+  Y+K   + +A  LF   P  KN V+W + I+ ++Q+G 
Sbjct: 34  HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPH-KNLVSWGSAISMHAQHGC 92

Query: 216 GFKAIECFRDM-RVEGVES-NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
              A+  F    R  G E+ N+F   S L ACA   A  FG QVHG  +  G + NVYV 
Sbjct: 93  EEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVG 152

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
           +ALI++YAK G +D+A  + +   + N V+W ++I G+++ G    AL LF KM    ++
Sbjct: 153 TALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVR 212

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
            D F   S ++  ++   L   +  H    +   E    V NALID+Y K   L  A  +
Sbjct: 213 PDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKL 272

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           F+ M++++++SWT++I G   +    EA+  F  +   G  PD    +SIL++C  L  +
Sbjct: 273 FDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAI 332

Query: 454 EFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC 513
             G+QVHA  +K+   S   V NSL+ +YAKC  + +A  VF+++   D I++ A+I G 
Sbjct: 333 WQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGY 392

Query: 514 AQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IK 571
           ++ G    A+  + +M     KP  +TFV LL   S     E ++       +++G  +K
Sbjct: 393 SRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSK-------QIHGLIVK 445

Query: 572 PGP--DHYA--CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGER 627
            G   D YA   +ID+  +   + +AKA+ + M    D  +W A++     +   E GE 
Sbjct: 446 SGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNR-DMVIWNAMIFGLAQN---EQGEE 501

Query: 628 AANNLFELEPMNAMP----YVQLSNMYST 652
           A     +L+     P    +V L  + ST
Sbjct: 502 AVKLFNQLQVSGLAPNEFTFVALVTVAST 530



 Score = 40.8 bits (94), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 6/123 (4%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF----NET 93
           ++ AL+D ++  G I E   LFE    +D   WN+MI+ YA  G+  EA  +F       
Sbjct: 555 VSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTG 614

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRG 152
              N+ T+  ++   ++ GL  E    F  M+ +    P      +V+ L    G L   
Sbjct: 615 VEPNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAA 674

Query: 153 EQF 155
           ++F
Sbjct: 675 KEF 677


>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera]
 gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
          Length = 742

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 256/656 (39%), Positives = 387/656 (58%), Gaps = 2/656 (0%)

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQN 213
           Q H   + +    + F+VT  V+       I  A  +F  FP+    + W  +I GYS +
Sbjct: 89  QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFL-WNAIIRGYSSH 147

Query: 214 GYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
            +   AIE +  M+  GV  + FT P +L AC+ V   + G +VHG I   GFE++V+VQ
Sbjct: 148 NFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQ 207

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
           + L+ +YAKCG ++ AR + E  +  N VSW SMI G+ + G   EAL +F +M  R++K
Sbjct: 208 NGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVK 267

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
            D     SVL  +    DL   KS+H  +VK G E    +  +L  MYAK G +  A   
Sbjct: 268 PDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSF 327

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           F+ M+  +V+ W ++I+G A +G   EA+  F +M    I  D + V S + ACA++  L
Sbjct: 328 FDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSL 387

Query: 454 EFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC 513
           +  + +     K+   + + V+ +L+ ++AKCG ++ A  VFD    +DV+ W+A+I+G 
Sbjct: 388 DLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGY 447

Query: 514 AQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPG 573
             +G+G++A+  +  M   G  P+ +TFVGLL AC+H+GL E     F SM K YGI+  
Sbjct: 448 GLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSM-KYYGIEAR 506

Query: 574 PDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLF 633
             HYAC++DLLGRSG L EA   +  M  EP  +VW ALL AC+++  + LGE AA  LF
Sbjct: 507 HQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQLF 566

Query: 634 ELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISED 693
            L+P N   YVQLSN+Y+++  W+  A+VR LM+ +G+ K+ G S +E N ++  F   D
Sbjct: 567 SLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVGD 626

Query: 694 RGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLT 753
           + HP   +I+ +++ +   +KEAG++P +   LH++ +E KE  L  HSE+LA+A+GL++
Sbjct: 627 KSHPRFKEIFEELESLERRLKEAGFIPHIESVLHDLNQEEKEETLCNHSERLAIAYGLIS 686

Query: 754 LPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
              G  +RI KNLR C +CH+A K IS +  R I++RD+NRFHHFK G CSC DYW
Sbjct: 687 TAPGTTLRITKNLRACINCHSATKLISKLVNREIVVRDANRFHHFKNGVCSCRDYW 742



 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 153/448 (34%), Positives = 244/448 (54%), Gaps = 2/448 (0%)

Query: 67  GFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL 126
           GF     + A  N G +  A+K+F+E P  + F W+++I GYS++    +A E++ +MQ 
Sbjct: 103 GFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQA 162

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
            G  P  +TL  VL+ CS   +L+ G++ HG   +  F+ + FV  GLV +YAKC  + +
Sbjct: 163 SGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQ 222

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A  +F+   D +N V+WT+MI+GY QNG   +A+  F  MR   V+ +     S+L A  
Sbjct: 223 ARIVFEGL-DDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYT 281

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            V   + G  +HGC++  G E    +  +L  MYAKCG +  AR   +  EI N + WN+
Sbjct: 282 DVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNA 341

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           MI G+A+ G+  EA+ LF++M +++I+ D  T  S +   A    L+ AK +   I KT 
Sbjct: 342 MISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTE 401

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
           +    FVN ALIDM+AK G++D A  VF+   DKDV+ W+++I G   HG  ++A+  F 
Sbjct: 402 YRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFY 461

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
            M+ +G+CP+ V    +L+AC    ++E G ++       G  +       +V +  + G
Sbjct: 462 AMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSG 521

Query: 487 CINDANRVFDSMHTRD-VITWTALIMGC 513
            +N+A     +M     V  W AL+  C
Sbjct: 522 HLNEAYDFITTMPIEPGVSVWGALLGAC 549



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 184/359 (51%), Gaps = 4/359 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           GQ+F    + D F  N ++A YA  GR+ +A+ +F     +N  +W+S+I GY   GL +
Sbjct: 193 GQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPM 252

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  +F QM+    +P    L +VLR  +    L++G+  HG  +K   +    ++  L 
Sbjct: 253 EALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLT 312

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
            MYAKC  +  A   F    +  N + W  MI+GY++NGY  +A+  F++M  + + ++ 
Sbjct: 313 AMYAKCGQVMVARSFFDQM-EIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDS 371

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            T  S + ACA V + D    +   I  + +  +V+V +ALIDM+AKCG +D AR + + 
Sbjct: 372 ITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDR 431

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNN 354
           +   + V W++MIVG+   G  ++A+ LF  M    +  +D T+  +L  C  S +    
Sbjct: 432 TLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEG 491

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGC 412
            +  HS+    G E        ++D+  + G+L+ A+     M  +  +S W +L+  C
Sbjct: 492 WELFHSMKY-YGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGAC 549



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 5/122 (4%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF----NET 93
           +N AL+D F+  G +D A ++F++  D+D   W+ MI  Y   GR ++A  LF       
Sbjct: 408 VNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAG 467

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE 153
              N  T+  L+   ++ GL  E +ELF  M+  G          V+ L    G L    
Sbjct: 468 VCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAY 527

Query: 154 QF 155
            F
Sbjct: 528 DF 529


>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial; Flags: Precursor
 gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
 gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 270/753 (35%), Positives = 422/753 (56%), Gaps = 6/753 (0%)

Query: 58  LFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEA 117
           + +K S  D F  N ++ AY  +G  ++A  LF+E P +N  ++ +L  GY+      + 
Sbjct: 75  ILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQ----DP 130

Query: 118 FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
             L+ ++  EG+  + +   + L+L       +     H   +K  +D NAFV   L++ 
Sbjct: 131 IGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINA 190

Query: 178 YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
           Y+ C  +  A  +F+     K+ V W  +++ Y +NGY   +++    MR+ G   N +T
Sbjct: 191 YSVCGSVDSARTVFEGIL-CKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYT 249

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           F + L A   + A DF   VHG IL + +  +  V   L+ +Y + GD+  A ++     
Sbjct: 250 FDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMP 309

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
            ++ V W+ MI  F + GF  EA+ LF +M    +  ++FT  S+LN  A        + 
Sbjct: 310 KNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQ 369

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           +H L+VK GF+   +V+NALID+YAK   +D A  +F  +  K+ +SW ++I G    G 
Sbjct: 370 LHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGE 429

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
             +A   F +   + +    V  SS L ACA L  ++ G QVH + +K+     ++V NS
Sbjct: 430 GGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNS 489

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
           L+ +YAKCG I  A  VF+ M T DV +W ALI G + +G G++AL+  D M  R  KP+
Sbjct: 490 LIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPN 549

Query: 538 YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALL 597
            +TF+G+L  CS+AGL +  +  FESM + +GI+P  +HY CM+ LLGRSG+L +A  L+
Sbjct: 550 GLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLI 609

Query: 598 DQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWE 657
           + +  EP   +W+A+LSA     + E   R+A  + ++ P +   YV +SNMY+ A +W 
Sbjct: 610 EGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWA 669

Query: 658 DAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAG 717
           + A +RK MK  G++KEPG SW+E    VH F      HP    I   ++ + +    AG
Sbjct: 670 NVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAG 729

Query: 718 YVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA-PIRIFKNLRVCGDCHTAM 776
           YVPD N  L ++++E K+  L  HSE+LA+A+GL+ +P     I I KNLR+C DCH+AM
Sbjct: 730 YVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAM 789

Query: 777 KYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           K IS++  R +++RD NRFHHF AG CSCGD+W
Sbjct: 790 KVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 157/325 (48%), Gaps = 6/325 (1%)

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
           D  + G++S+   + ++L  C   +       +H  IL  G   +++  + L++ Y K G
Sbjct: 41  DSIIPGLDSH--AYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAG 98

Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
               A  L +     N VS+ ++  G+A Q    + + L+ ++H    +++   + S L 
Sbjct: 99  FDKDALNLFDEMPERNNVSFVTLAQGYACQ----DPIGLYSRLHREGHELNPHVFTSFLK 154

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
            F S         +HS IVK G++   FV  ALI+ Y+  G++D A  VF  +  KD++ 
Sbjct: 155 LFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVV 214

Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
           W  +++    +G +E++LK  S MR++G  P++    + L A   L   +F + VH   L
Sbjct: 215 WAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQIL 274

Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ 524
           K+       V   L+ +Y + G ++DA +VF+ M   DV+ W+ +I    QNG   EA+ 
Sbjct: 275 KTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVD 334

Query: 525 FYDQMLARGTKPDYITFVGLLFACS 549
            + +M      P+  T   +L  C+
Sbjct: 335 LFIRMREAFVVPNEFTLSSILNGCA 359



 Score = 41.2 bits (95), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 76/189 (40%), Gaps = 8/189 (4%)

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
           SD  I G+  D     ++L  C +       + +H   LK G C  L   N L+  Y K 
Sbjct: 40  SDSIIPGL--DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKA 97

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G   DA  +FD M  R+ +++  L    AQ    ++ +  Y ++   G + +   F   L
Sbjct: 98  GFDKDALNLFDEMPERNNVSFVTL----AQGYACQDPIGLYSRLHREGHELNPHVFTSFL 153

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
                   AE   W    + K+ G        A +I+     G +  A+ + + ++ + D
Sbjct: 154 KLFVSLDKAEICPWLHSPIVKL-GYDSNAFVGAALINAYSVCGSVDSARTVFEGILCK-D 211

Query: 606 ATVWKALLS 614
             VW  ++S
Sbjct: 212 IVVWAGIVS 220



 Score = 41.2 bits (95), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 5/130 (3%)

Query: 31  NSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF 90
           N+ K  +  N  +  ++  G+I  A  +F +M   D  +WN +I+ Y+  G  R+A ++ 
Sbjct: 479 NNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRIL 538

Query: 91  NETPFK----NFFTWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQYTLDNVLRLCSL 145
           +    +    N  T+  ++ G SN GL  +  E F  M +  G  P       ++RL   
Sbjct: 539 DIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGR 598

Query: 146 KGLLQRGEQF 155
            G L +  + 
Sbjct: 599 SGQLDKAMKL 608


>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
 gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
           Group]
 gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
          Length = 658

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 252/658 (38%), Positives = 379/658 (57%), Gaps = 2/658 (0%)

Query: 152 GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYS 211
           G   HGY +K  F     V   L+  YAK   I +A  +F   P  ++ ++W ++I G +
Sbjct: 3   GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQ-RDIISWNSIIGGCA 61

Query: 212 QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVY 271
            NG   KA+E F  M +EG E +  T  S++ AC        G  VHG  + +G  +   
Sbjct: 62  SNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETS 121

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD 331
           + +AL+DMY+ C D  S  ++    E  N VSW +MI  + R G   +   LF++M    
Sbjct: 122 LGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEG 181

Query: 332 IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
           I+ D F   S L+ FA N  L + KSVH   ++ G E    V NAL++MY K G ++ A 
Sbjct: 182 IRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEAR 241

Query: 392 MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELT 451
            +F+ +  KD ISW +LI G +      EA   F++M +  + P+ V ++ IL A A L+
Sbjct: 242 FIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLS 300

Query: 452 VLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIM 511
            LE G+++HA  ++ G      V N+LV +Y KCG +  A R+FD +  +++I+WT +I 
Sbjct: 301 SLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIA 360

Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIK 571
           G   +G+G++A+  ++QM   G +PD  +F  +L+ACSH+GL +    +F +M   + I+
Sbjct: 361 GYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIE 420

Query: 572 PGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANN 631
           P   HYACM+DLL  +G L EA   ++ M  EPD+++W +LL  CR+H +++L E+ A  
Sbjct: 421 PKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEM 480

Query: 632 LFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFIS 691
           +FELEP N   YV L+N+Y+ A +WE   +++  +  RG+R+  GCSW+E   + HIF +
Sbjct: 481 VFELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFA 540

Query: 692 EDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGL 751
           E+R HP    I   +D++   ++E G+ P   +AL   ++   +  L  HS KLAVAFG+
Sbjct: 541 ENRNHPQGMRIAEFLDDVARRMQEEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGV 600

Query: 752 LTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           L L QG PIR+ KN RVC  CH A K+IS +  R IILRDSNRFHHF+ G CSC  YW
Sbjct: 601 LNLSQGRPIRVTKNSRVCSHCHEAAKFISKMCGREIILRDSNRFHHFEEGRCSCRGYW 658



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 141/445 (31%), Positives = 234/445 (52%), Gaps = 4/445 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +I+ YA S R+ +A  +F+E P ++  +W+S+I G ++ GL  +A ELF +M LEG  
Sbjct: 23  NALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLYDKAVELFVRMWLEGQE 82

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
               TL +V+  C        G   HGY+++T       +   L+DMY+ C        +
Sbjct: 83  LDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKI 142

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F+   + KN V+WT MIT Y++ G+  K    F++M +EG+  + F   S L A A   +
Sbjct: 143 FRNM-EQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNES 201

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              G  VHG  + +G E  + V +AL++MY KCG ++ AR + ++    + +SWN++I G
Sbjct: 202 LKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGG 261

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           ++R     EA +LF +M  + ++ +  T   +L   AS   L   + +H+  V+ G+   
Sbjct: 262 YSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLED 320

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
            FV NAL+DMY K G L  A  +F+++ +K++ISWT +I G   HG   +A+  F  M+ 
Sbjct: 321 NFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKG 380

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQ-VHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
           SGI PD    S+IL AC+   + + G +  +A+  +      L     +V +    G + 
Sbjct: 381 SGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLK 440

Query: 490 DANRVFDSMHTR-DVITWTALIMGC 513
           +A    ++M    D   W +L+ GC
Sbjct: 441 EAYEFIETMPIEPDSSIWVSLLRGC 465



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 178/355 (50%), Gaps = 4/355 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++  Y+N    R   K+F     KN  +W+++I  Y+  G   +   LF +M LEG R
Sbjct: 124 NALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIR 183

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  + + + L   +    L+ G+  HGYAI+   +    V   L++MY KC  + EA ++
Sbjct: 184 PDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFI 243

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F      K+ ++W T+I GYS++    +A   F +M ++ +  N  T   IL A A++S+
Sbjct: 244 FDHVTK-KDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSS 301

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            + G ++H   +  G+  + +V +AL+DMY KCG L  ARRL +     N +SW  MI G
Sbjct: 302 LERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAG 361

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTGFEG 369
           +   G  ++A++LF++M    I+ D  ++ ++L  C  S +     +  +++  +   E 
Sbjct: 362 YGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEP 421

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALK 423
                  ++D+    GNL  A+     M  + D   W SL+ GC  H + + A K
Sbjct: 422 KLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEK 476



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 137/293 (46%), Gaps = 36/293 (12%)

Query: 21  GPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           G + + + + N ++    +  AL++ +   G ++EA  +F+ ++ +D  +WNT+I  Y+ 
Sbjct: 205 GKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSR 264

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
           S    EA  LFNE                               +QL   RP+  T+  +
Sbjct: 265 SNLANEAFTLFNEM-----------------------------LLQL---RPNAVTMACI 292

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKN 199
           L   +    L+RG + H YA++  +  + FV   LVDMY KC  +  A  LF M  + KN
Sbjct: 293 LPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTN-KN 351

Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG 259
            ++WT MI GY  +G G  AI  F  M+  G++ +  +F +IL AC+    RD G +   
Sbjct: 352 LISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFN 411

Query: 260 CILSSG-FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIVG 310
            + +    E  +   + ++D+    G+L  A   +E   I+ + S W S++ G
Sbjct: 412 AMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRG 464


>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
           bursa-pastoris]
          Length = 706

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 279/710 (39%), Positives = 400/710 (56%), Gaps = 42/710 (5%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           PS   L N   L SL+ +       H   IKT      + ++ L++            Y 
Sbjct: 4   PSLSLLHNCKTLQSLRII-------HAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYA 56

Query: 191 FKMFPDGK--NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
             +F   +  N + W TM  G++ +     A+  +  M   G+  N +TFP +L ACA  
Sbjct: 57  ISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKS 116

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE----------- 297
            A   G Q+HG +L  G + ++YV ++LI MY K G  + AR++ + S            
Sbjct: 117 KAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALI 176

Query: 298 --------------------IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
                               + + VSWN++I G+A  G +KEAL LFK+M   ++K D+ 
Sbjct: 177 KGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDES 236

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           T  +VL+  A +  +   + VHS I   GF     + NALID+Y K G ++ A  +F  +
Sbjct: 237 TMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGL 296

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
             KDVISW +LI G  +   Y+EAL  F +M  SG  P+ V + SIL ACA L  ++ G+
Sbjct: 297 SYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGR 356

Query: 458 QVHAVFLK--SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
            +H    K   G  +  S+  SL+ +YAKCG I  A +VFDSM  R + +W A+I G A 
Sbjct: 357 WIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAM 416

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
           +G+   A   + +M   G +PD ITFVGLL ACSH+G+ +  R  F SM + Y I P  +
Sbjct: 417 HGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLE 476

Query: 576 HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
           HY CMIDLLG SG   EA+ +++ M  +PD  +W +LL AC++HG++ELGE  A NL ++
Sbjct: 477 HYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKI 536

Query: 636 EPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG 695
           EP N+  YV LSN+Y+TAG+W + A+ R L+  +G++K PGCS +E +S VH FI  D+ 
Sbjct: 537 EPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKL 596

Query: 696 HPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLP 755
           HP   +IY  ++E+ +L++EAG+VPD +  L  +EEE KE  L +HSEKLA+AFGL++  
Sbjct: 597 HPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTK 656

Query: 756 QGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSC 805
            G  + I KNLRVC +CH A K IS +Y R II RD  RFHHF  G CSC
Sbjct: 657 PGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFXDGVCSC 706



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 133/469 (28%), Positives = 229/469 (48%), Gaps = 34/469 (7%)

Query: 83  LREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRL 142
           L  A  +F+     N   W+++  G++     + A  L+  M   G  P+ YT   +L+ 
Sbjct: 53  LTYAISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKA 112

Query: 143 CSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF----------- 191
           C+     + G+Q HG+ +K   DL+ +V T L+ MY K     +A  +F           
Sbjct: 113 CAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSY 172

Query: 192 -----------------KMFPD--GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
                            KMF +   K+ V+W  +I+GY++ G   +A+E F++M    V+
Sbjct: 173 TALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVK 232

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
            ++ T  ++L+ACA  ++ + G QVH  I   GF +N+ + +ALID+Y KCG++++A  L
Sbjct: 233 PDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGL 292

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
            E     + +SWN++I G+     +KEAL LF++M       ++ T  S+L   A    +
Sbjct: 293 FEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAI 352

Query: 353 NNAKSVHSLIVK--TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           +  + +H  I K   G      +  +LIDMYAK G+++ A  VF+ M ++ + SW ++I 
Sbjct: 353 DIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIF 412

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
           G A HG    A   FS MR  GI PD +    +LSAC+   +L+ G+ +     +    +
Sbjct: 413 GFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKIT 472

Query: 471 -SLSVDNSLVLVYAKCGCINDANRVFDSMHT-RDVITWTALIMGCAQNG 517
             L     ++ +    G   +A  + +SM    D + W +L+  C  +G
Sbjct: 473 PKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHG 521



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 198/382 (51%), Gaps = 13/382 (3%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +  +G  ++A ++F++ S RD  ++  +I  YA++G +  A+K+F+E P K+  +W++LI
Sbjct: 148 YVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALI 207

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            GY+  G   EA ELF +M     +P + T+  VL  C+    ++ G Q H +     F 
Sbjct: 208 SGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFG 267

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            N  +V  L+D+Y KC  +  A  LF+     K+ ++W T+I GY+      +A+  F++
Sbjct: 268 SNLKIVNALIDLYIKCGEVETASGLFEGL-SYKDVISWNTLIGGYTHMNLYKEALLLFQE 326

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS--SGFEANVYVQSALIDMYAKC 283
           M   G   N+ T  SIL ACA + A D G  +H  I     G      ++++LIDMYAKC
Sbjct: 327 MLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKC 386

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
           GD+++A+++ +     +  SWN+MI GFA  G    A  +F +M    I+ DD T+  +L
Sbjct: 387 GDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLL 446

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN-----ALIDMYAKQGNLDCAFMVFNLMQ 398
           +  + +  L+  +     I ++  E YK          +ID+    G    A  + N M+
Sbjct: 447 SACSHSGMLDLGRH----IFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSME 502

Query: 399 -DKDVISWTSLITGCAYHGSYE 419
            D D + W SL+  C  HG+ E
Sbjct: 503 MDPDGVIWCSLLKACKMHGNVE 524


>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Cucumis sativus]
          Length = 697

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 246/641 (38%), Positives = 390/641 (60%), Gaps = 5/641 (0%)

Query: 171 VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV-E 229
           +  L+++Y KC  +  A  LF   P  +N V+W+ ++ GY QNG   +  E F+ M V +
Sbjct: 60  LNSLINLYVKCDEVSIARKLFDSMPR-RNVVSWSALMAGYMQNGNPLEVFELFKKMVVKD 118

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
            +  N++   + +++C +    + G Q HG  L SG E + YV++ALI +Y+KC D+ +A
Sbjct: 119 NIFPNEYVIATAISSCDSQMYVE-GKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAA 177

Query: 290 RRLLEYSEIDNEV-SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
            ++L Y+   N++  +N ++ G  +     EA+ + K + +  I+ ++ TY ++    AS
Sbjct: 178 IQIL-YTVPGNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCAS 236

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
             D+   K VH+ ++K+  +   ++ +++IDMY K GN+      F+ +Q ++V+SWTS+
Sbjct: 237 LKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSI 296

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
           I     +  +EEAL  FS M I  I P+   ++ + ++ A L+ L  G Q+HA   KSG 
Sbjct: 297 IAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGL 356

Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
             ++ V N+L+++Y K G I  A  VF +M   ++ITW A+I G + +G GKEAL  +  
Sbjct: 357 KGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQD 416

Query: 529 MLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSG 588
           M+A G +P+Y+TF+G++ AC+H  L +   +YF  + K + I PG +HY C++ LL RSG
Sbjct: 417 MMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSG 476

Query: 589 KLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSN 648
           +L EA+  +       D   W+ LL+AC VH   + G + A  L +LEP +   Y+ LSN
Sbjct: 477 RLDEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSN 536

Query: 649 MYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDE 708
           M++   +W+    +RKLM+ R ++KEPG SW+E  +  H+F SED  HP    IY  + +
Sbjct: 537 MHARVRRWDHVVEIRKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANLIYENVKD 596

Query: 709 IMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRV 768
           ++  I+  GYVPD++  LH++E+E K   L+YHSEKLAVA+GL+  P GAPI + KNLR+
Sbjct: 597 LLSKIRPLGYVPDIDNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPITVIKNLRM 656

Query: 769 CGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           C DCHTA+K IS V  R I++RD+NRFHHF+ G CSCGDYW
Sbjct: 657 CDDCHTAIKLISKVANRVIVVRDANRFHHFQNGCCSCGDYW 697



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/468 (29%), Positives = 245/468 (52%), Gaps = 8/468 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL-EGY 129
           N++I  Y     +  A+KLF+  P +N  +WS+L+ GY   G  +E FELF +M + +  
Sbjct: 61  NSLINLYVKCDEVSIARKLFDSMPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNI 120

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
            P++Y +   +  C  +  ++ G+Q HGYA+K+  + + +V   L+ +Y+KC  +  A  
Sbjct: 121 FPNEYVIATAISSCDSQMYVE-GKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQ 179

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +    P G +   +  ++ G  Q+ +  +A++  + +  EG+E N  T+ +I   CA++ 
Sbjct: 180 ILYTVP-GNDIFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLK 238

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
               G QVH  +L S  + +VY+ S++IDMY KCG++ S R   +  +  N VSW S+I 
Sbjct: 239 DITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIA 298

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
            + +  F +EAL+LF KM    I  +++T   + N  A    L     +H+   K+G +G
Sbjct: 299 AYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKG 358

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
              V NALI MY K G++  A  VF+ M   ++I+W ++ITG ++HG  +EAL  F DM 
Sbjct: 359 NVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMM 418

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG-CSSLSVDNSLVLVYAKCGCI 488
            +G  P++V    ++ ACA L +++ G       +K       L     +V + ++ G +
Sbjct: 419 ATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRL 478

Query: 489 NDANRVFDSMHTR-DVITWTALIMGC---AQNGKGKEALQFYDQMLAR 532
           ++A     S     DV++W  L+  C       KG++  ++  Q+  R
Sbjct: 479 DEAENFMRSHQINWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQLEPR 526



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 189/393 (48%), Gaps = 12/393 (3%)

Query: 241 ILTACAAVSARDFGAQVHGCILSSGF---EANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           +L   A      FG  +H  +  +     ++ V   ++LI++Y KC ++  AR+L +   
Sbjct: 25  LLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMP 84

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNIDLNNAK 356
             N VSW++++ G+ + G   E   LFKKM  +D I  +++   + ++   S + +   K
Sbjct: 85  RRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYV-EGK 143

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
             H   +K+G E +++V NALI +Y+K  ++  A  +   +   D+  +  ++ G   H 
Sbjct: 144 QCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQHT 203

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
              EA+     +   GI  ++    +I   CA L  +  G+QVHA  LKS     + + +
Sbjct: 204 HMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGS 263

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           S++ +Y KCG +      FD + +R+V++WT++I    QN   +EAL  + +M      P
Sbjct: 264 SIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPP 323

Query: 537 DYITFVGLLFACSHAGLAENARW-YFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           +  T + +LF  S AGL+         +  +  G+K        +I +  +SG ++ A++
Sbjct: 324 NEYT-MAVLFN-SAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQS 381

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
           +   M    +   W A+++    HG   LG+ A
Sbjct: 382 VFSNMTC-CNIITWNAIITGHSHHG---LGKEA 410



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 11/259 (4%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            Q+ +   D D +  +++I  Y   G +   +  F+    +N  +W+S+I  Y       
Sbjct: 248 AQMLKSDIDCDVYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFE 307

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  LF +M+++   P++YT+  +    +    L  G+Q H  A K+    N  V   L+
Sbjct: 308 EALNLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALI 367

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
            MY K   I  A+ +F       N + W  +ITG+S +G G +A+  F+DM   G   N 
Sbjct: 368 IMYFKSGDILAAQSVFSNMT-CCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNY 426

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSS-----GFEANVYVQSALIDMYAKCGDLDSAR 290
            TF  ++ ACA +   D G      ++       G E      + ++ + ++ G LD A 
Sbjct: 427 VTFIGVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEH----YTCIVGLLSRSGRLDEAE 482

Query: 291 RLLEYSEID-NEVSWNSMI 308
             +   +I+ + VSW +++
Sbjct: 483 NFMRSHQINWDVVSWRTLL 501


>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 246/652 (37%), Positives = 389/652 (59%), Gaps = 4/652 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++  Y   G L++A+K F+    ++  +W+ +I GYS  G + +A  ++ QM   GY 
Sbjct: 119 NHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYF 178

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P Q T  ++++ C + G +  G Q HG+ IK+ +D +      L+ MY K   I  A  +
Sbjct: 179 PDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDV 238

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV-ESNQFTFPSILTACAAVS 249
           F M    K+ ++W +MITG++Q GY  +A+  FRDM  +GV + N+F F S+ +AC ++ 
Sbjct: 239 FTMIST-KDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLL 297

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
             +FG Q+ G     G   NV+   +L DMYAK G L SA+R     E  + VSWN++I 
Sbjct: 298 KPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIA 357

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
             A    + EA+  F +M    +  DD T+ ++L    S + LN    +HS I+K G + 
Sbjct: 358 ALANSDVN-EAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDK 416

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVF-NLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
              V N+L+ MY K  NL  AF VF ++ ++ +++SW ++++ C+ H    EA + F  M
Sbjct: 417 VAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKLM 476

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
             S   PD++ +++IL  CAEL  LE G QVH   +KSG    +SV N L+ +YAKCG +
Sbjct: 477 LFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLL 536

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
             A  VFDS    D+++W++LI+G AQ G G+EAL  +  M   G +P+ +T++G+L AC
Sbjct: 537 KHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSAC 596

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           SH GL E     + +M+   GI P  +H +CM+DLL R+G L EA+  + +   +PD T+
Sbjct: 597 SHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKTGFDPDITM 656

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           WK LL++C+ HG++++ ERAA N+ +L+P N+   V LSN++++AG W++ AR+R LMK 
Sbjct: 657 WKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASAGNWKEVARLRNLMKQ 716

Query: 669 RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
            G++K PG SW+E   Q+H+F SED  HP R +IY+ ++++ L + + GY P
Sbjct: 717 MGVQKVPGQSWIEVKDQIHVFFSEDSSHPQRGNIYTMLEDLWLQMLDDGYDP 768



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 154/525 (29%), Positives = 252/525 (48%), Gaps = 22/525 (4%)

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           +QLE   PS Y   N++  C+    L+ G++ H + +K+    +  +   +++MY KC  
Sbjct: 76  IQLE---PSTYV--NLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCGS 130

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A   F      ++ V+WT MI+GYSQNG    AI  +  M   G   +Q TF SI+ 
Sbjct: 131 LKDARKAFDTM-QLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIK 189

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC      D G Q+HG ++ SG++ ++  Q+ALI MY K G +  A  +       + +S
Sbjct: 190 ACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLIS 249

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDI-KIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           W SMI GF + G+  EAL LF+ M  + + + ++F + SV +   S +     + +  + 
Sbjct: 250 WASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMC 309

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
            K G     F   +L DMYAK G L  A   F  ++  D++SW ++I   A +    EA+
Sbjct: 310 AKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALA-NSDVNEAI 368

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
            +F  M   G+ PD +   ++L AC     L  G Q+H+  +K G     +V NSL+ +Y
Sbjct: 369 YFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMY 428

Query: 483 AKCGCINDANRVF-DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
            KC  ++DA  VF D     ++++W A++  C+Q+ +  EA + +  ML    KPD IT 
Sbjct: 429 TKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITI 488

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPG----PDHYACMIDLLGRSGKLIEAKALL 597
             +L  C     AE       +    + +K G          +ID+  + G L  A+ + 
Sbjct: 489 TTILGTC-----AELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVF 543

Query: 598 DQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           D     PD   W +L+     +    LG+ A N    +  +   P
Sbjct: 544 DS-TQNPDIVSWSSLIVG---YAQFGLGQEALNLFRMMRNLGVQP 584



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 145/477 (30%), Positives = 232/477 (48%), Gaps = 10/477 (2%)

Query: 49  SGEIDEAGQL----FEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSL 104
           +G+ID  GQL     +   D      N +I+ Y   G++  A  +F     K+  +W+S+
Sbjct: 194 AGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASM 253

Query: 105 IYGYSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC 163
           I G++  G +IEA  LF  M  +G Y+P+++   +V   C      + G Q  G   K  
Sbjct: 254 ITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFG 313

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
              N F    L DMYAK   +  A+  F    +  + V+W  +I   + +    +AI  F
Sbjct: 314 LGRNVFAGCSLCDMYAKFGFLPSAKRAFYQI-ESPDLVSWNAIIAALANSDVN-EAIYFF 371

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
             M   G+  +  TF ++L AC +    + G Q+H  I+  G +    V ++L+ MY KC
Sbjct: 372 CQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKC 431

Query: 284 GDLDSARRLL-EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
            +L  A  +  + SE  N VSWN+++   ++     EA  LFK M   + K D+ T  ++
Sbjct: 432 SNLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTI 491

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV 402
           L   A  + L     VH   VK+G      V+N LIDMYAK G L  A  VF+  Q+ D+
Sbjct: 492 LGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDI 551

Query: 403 ISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAV 462
           +SW+SLI G A  G  +EAL  F  MR  G+ P+ V    +LSAC+ + ++E G  ++  
Sbjct: 552 VSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNT 611

Query: 463 F-LKSGGCSSLSVDNSLVLVYAKCGCINDA-NRVFDSMHTRDVITWTALIMGCAQNG 517
             ++ G   +    + +V + A+ GC+ +A N +  +    D+  W  L+  C  +G
Sbjct: 612 MEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKTGFDPDITMWKTLLASCKTHG 668



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 211/410 (51%), Gaps = 16/410 (3%)

Query: 218 KAIECFR-DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
           +A++ F   ++   ++    T+ +++ AC  V +  +G ++H  IL S  + ++ +Q+ +
Sbjct: 62  EALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQNHI 121

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           ++MY KCG L  AR+  +  ++ + VSW  MI G+++ G   +A+ ++ +M       D 
Sbjct: 122 LNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQ 181

Query: 337 FTYPSVLN--CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVF 394
            T+ S++   C A +IDL     +H  ++K+G++ +    NALI MY K G +  A  VF
Sbjct: 182 LTFGSIIKACCIAGDIDL--GGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVF 239

Query: 395 NLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC-PDHVVVSSILSACAELTVL 453
            ++  KD+ISW S+ITG    G   EAL  F DM   G+  P+  +  S+ SAC  L   
Sbjct: 240 TMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKP 299

Query: 454 EFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC 513
           EFG+Q+  +  K G   ++    SL  +YAK G +  A R F  + + D+++W A+I   
Sbjct: 300 EFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAAL 359

Query: 514 AQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPG 573
           A N    EA+ F+ QM+  G  PD ITF+ LL AC  + +  N      S    Y IK G
Sbjct: 360 A-NSDVNEAIYFFCQMIHMGLMPDDITFLNLLCACG-SPMTLNQGMQIHS----YIIKMG 413

Query: 574 PDHYAC----MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVH 619
            D  A     ++ +  +   L +A  +   +    +   W A+LSAC  H
Sbjct: 414 LDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQH 463



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 32/176 (18%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           NR +  ++  G +  A  +F+   + D  +W+++I  YA                     
Sbjct: 524 NRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYA--------------------- 562

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG-EQFHGY 158
                      +GL  EA  LF  M+  G +P++ T   VL  CS  GL++ G   ++  
Sbjct: 563 ----------QFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNTM 612

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
            I+         V+ +VD+ A+  C++EAE   K      +   W T++     +G
Sbjct: 613 EIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKTGFDPDITMWKTLLASCKTHG 668


>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
          Length = 643

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 248/628 (39%), Positives = 365/628 (58%), Gaps = 21/628 (3%)

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF--TFPSILTACAAVSARDFGAQVHGC 260
           W   I   +  G+   A+  F  MR      +    + P+ L +CAA+     GA +H  
Sbjct: 16  WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75

Query: 261 ILSSGFEANVYVQSALIDMYAK--CGDLDSA-----------------RRLLEYSEIDNE 301
            + SG  A+ +  +AL+++Y K  C  LDS                  R++ +     + 
Sbjct: 76  AIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDV 135

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           VSWN++++G A +G H EAL   +KM     + D FT  +VL  FA   D+     VH  
Sbjct: 136 VSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGF 195

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
             + GF+   FV ++LIDMYA     D +  VF+ +  +D I W SL+ GCA +GS EEA
Sbjct: 196 AFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEA 255

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           L  F  M  +G+ P  V  SS++  C  L  L FG+Q+HA  +  G   ++ + +SL+ +
Sbjct: 256 LGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDM 315

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           Y KCG I+ A+ +FD M + DV++WTA+IMG A +G  +EAL  +++M     KP++ITF
Sbjct: 316 YCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITF 375

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
           + +L ACSHAGL +    YF+SM   YGI P  +H+A + D LGR+G+L EA   + +M 
Sbjct: 376 LAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQ 435

Query: 602 GEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
            +P A+VW  LL ACRVH +  L E  A  + ELEP +   +V LSNMYS +G+W +AA 
Sbjct: 436 IKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAH 495

Query: 662 VRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPD 721
           +R+ M+ +G++K+P CSW+E  S++H+F++ DR HP    I   ++     +   G+VP+
Sbjct: 496 LRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMAREGHVPN 555

Query: 722 MNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISA 781
                 ++EEE K   L  HSEKLA+ FG+++ P G  IR+ KNLRVC DCHT  K+IS 
Sbjct: 556 TEDVFQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRVMKNLRVCIDCHTVTKFISK 615

Query: 782 VYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +  R I++RD+NRFHHFK GNCSCGD+W
Sbjct: 616 LADREIVVRDANRFHHFKDGNCSCGDFW 643



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 202/386 (52%), Gaps = 33/386 (8%)

Query: 79  NSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDN 138
           +S      +K+F+E   ++  +W++L+ G +  G   EA     +M  EG+RP  +TL  
Sbjct: 116 SSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLST 175

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD-- 196
           VL + +    ++RG + HG+A +  FD + FV + L+DMYA C      +Y  K+F +  
Sbjct: 176 VLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCT---RTDYSVKVFDNLP 232

Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
            ++H+ W +++ G +QNG   +A+  FR M   GV     TF S++  C  +++  FG Q
Sbjct: 233 VRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQ 292

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           +H  ++  GFE NV++ S+LIDMY KCG++  A  + +     + VSW +MI+G+A  G 
Sbjct: 293 LHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGP 352

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN- 375
            +EAL LF++M   + K +  T+ +VL   +           H+ +V  G++ +K ++N 
Sbjct: 353 AREALVLFERMELGNAKPNHITFLAVLTACS-----------HAGLVDKGWKYFKSMSNH 401

Query: 376 -----------ALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSY---EE 420
                      AL D   + G LD A+   + MQ K   S W++L+  C  H +    EE
Sbjct: 402 YGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEE 461

Query: 421 ALKYFSDMRISGICPDHVVVSSILSA 446
             K   ++    I   HVV+S++ SA
Sbjct: 462 VAKKIMELEPRSI-GSHVVLSNMYSA 486



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 212/439 (48%), Gaps = 30/439 (6%)

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQY--TLDNVLRLCSLKGLLQRGEQFHGY 158
           W+  I   +  G   +A  LF +M+      S    +L   L+ C+  GL   G   H  
Sbjct: 16  WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIF----------------EAEYLFKMFPD--GKNH 200
           AI++    + F    L+++Y K  C +                  E + K+F +   ++ 
Sbjct: 76  AIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDV 135

Query: 201 VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
           V+W T++ G ++ G   +A+   R M  EG   + FT  ++L   A  +    G +VHG 
Sbjct: 136 VSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGF 195

Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEA 320
              +GF+++V+V S+LIDMYA C   D + ++ +   + + + WNS++ G A+ G  +EA
Sbjct: 196 AFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEA 255

Query: 321 LSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDM 380
           L +F++M    ++    T+ S++    +   L   K +H+ ++  GFE   F++++LIDM
Sbjct: 256 LGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDM 315

Query: 381 YAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVV 440
           Y K G +  A  +F+ M   DV+SWT++I G A HG   EAL  F  M +    P+H+  
Sbjct: 316 YCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITF 375

Query: 441 SSILSACAELTVLEFGQQVHAVFLKS-----GGCSSLSVDNSLVLVYAKCGCINDANRVF 495
            ++L+AC+   +++ G +    + KS     G   +L    +L     + G +++A    
Sbjct: 376 LAVLTACSHAGLVDKGWK----YFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFI 431

Query: 496 DSMHTRDVIT-WTALIMGC 513
             M  +   + W+ L+  C
Sbjct: 432 SKMQIKPTASVWSTLLRAC 450



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 124/255 (48%), Gaps = 3/255 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G  F    D D F  +++I  YAN  R   + K+F+  P ++   W+SL+ G +  G   
Sbjct: 194 GFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVE 253

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  +F +M   G RP   T  +++ +C     L+ G+Q H Y I   F+ N F+ + L+
Sbjct: 254 EALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLI 313

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMY KC  I  A  +F       + V+WT MI GY+ +G   +A+  F  M +   + N 
Sbjct: 314 DMYCKCGEISIAHCIFDKM-SSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNH 372

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLE 294
            TF ++LTAC+     D G +    + +  G    +   +AL D   + G+LD A   + 
Sbjct: 373 ITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFIS 432

Query: 295 YSEIDNEVS-WNSMI 308
             +I    S W++++
Sbjct: 433 KMQIKPTASVWSTLL 447



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 32/118 (27%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           ++ +L+D +   GEI  A  +F+KMS  D  +W  MI  YA  G  REA  LF       
Sbjct: 308 ISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFE------ 361

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
                                    +M+L   +P+  T   VL  CS  GL+ +G ++
Sbjct: 362 -------------------------RMELGNAKPNHITFLAVLTACSHAGLVDKGWKY 394


>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group]
 gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
          Length = 1062

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 284/758 (37%), Positives = 427/758 (56%), Gaps = 21/758 (2%)

Query: 66   DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
            D +  + +++A+A  G L EAK ++     +N  T + LI G         A E+F    
Sbjct: 312  DLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFM--- 368

Query: 126  LEGYRPSQYT--------LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVT-GLVD 176
              G R S           L  +    + +  L++G + H + ++         V+ GLV+
Sbjct: 369  --GARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVN 426

Query: 177  MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
            MYAKC  I +A  +F++  + ++ ++W T+IT   QNGY   A+  +  MR   +  + F
Sbjct: 427  MYAKCGAIDKACRVFQLM-EARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNF 485

Query: 237  TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
               S L++CA +     G Q+H   +  G   +  V +AL+ MY +CG +     +    
Sbjct: 486  AAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSM 545

Query: 297  EIDNEVSWNSMI-VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               + VSWNS++ V  + Q    E++ +F  M    +  +  T+ + L        L   
Sbjct: 546  SAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELG 605

Query: 356  KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAY 414
            K +HS+++K G      V+NAL+  YAK G++D    +F+ M  + D ISW S+I+G  Y
Sbjct: 606  KQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIY 665

Query: 415  HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
            +G  +EA+     M  S    DH   S +L+ACA +  LE G ++HA  L+S   S + V
Sbjct: 666  NGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVV 725

Query: 475  DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
            +++LV +Y+KCG I+ A++VF SM  ++  +W ++I G A++G G++AL+ +++M   G 
Sbjct: 726  ESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGE 785

Query: 535  KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAK 594
             PD++TFV +L ACSHAGL E    YFE M+  YGI P  +HY+C+IDLLGR+G+L + +
Sbjct: 786  SPDHVTFVSVLSACSHAGLVERGLDYFELMED-YGILPRIEHYSCVIDLLGRAGELDKIQ 844

Query: 595  ALLDQMVGEPDATVWKALLSAC---RVHGDLELGERAANNLFELEPMNAMPYVQLSNMYS 651
              + +M  +P+  +W+ +L AC   +    ++LG  A+  L ELEP N + YV  S  ++
Sbjct: 845  EYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNPVNYVLSSKFHA 904

Query: 652  TAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIML 711
              G+WED A+ R  MK   ++KE G SWV     VH FI+ DR HP   +IY K++ ++ 
Sbjct: 905  AIGRWEDTAKARAAMKGAAVKKEAGRSWVTLTDGVHTFIAGDRSHPNTKEIYEKLNFLIQ 964

Query: 712  LIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGD 771
             I+ AGYVP   + LH++EEE KE  L YHSEKLAVAF L     G PIRI KNLRVCGD
Sbjct: 965  KIRNAGYVPLTEYVLHDLEEENKEELLRYHSEKLAVAFVLTRSSSGGPIRIMKNLRVCGD 1024

Query: 772  CHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            CHTA +YIS +  R IILRDS RFHHFK G CSCGDYW
Sbjct: 1025 CHTAFRYISQIVGRQIILRDSIRFHHFKDGKCSCGDYW 1062



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 181/580 (31%), Positives = 294/580 (50%), Gaps = 30/580 (5%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N ++ +YA   RL  A+++F+  P +N  +W+ LI G+   GL  +AF LF  M 
Sbjct: 99  DLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGLPEDAFPLFRAML 158

Query: 126 LEGY--RPSQYTLDNVLRLCSLKGLLQRG--EQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
            EG   RP+ +T  +VLR C   G  + G   Q HG   KT F  N  V   L+ MY  C
Sbjct: 159 REGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSC 218

Query: 182 KC--IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE--GVE--SNQ 235
                  A+ +F   P  ++ + W  +++ Y++ G        FR M+ +  G+E    +
Sbjct: 219 SVGPPILAQRVFDTTPV-RDLITWNALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPTE 277

Query: 236 FTFPSILTACAAVSARDFGA--QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
            TF S++TA   +S+   G   Q+   +L SG  +++YV SAL+  +A+ G LD A+ + 
Sbjct: 278 HTFGSLITA-TYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIY 336

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD---IKIDDFTYPSVLNCFA--- 347
              +  N V+ N +I G  +Q   + A  +F  M ARD   + +D  TY  +L+  A   
Sbjct: 337 LGLKERNAVTLNGLIAGLVKQQHGEAAAEIF--MGARDSAAVNVD--TYVVLLSAIAEFS 392

Query: 348 -SNIDLNNAKSVHSLIVKTGFEGYKF-VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
            +   L   + VH+ +++ G    K  V+N L++MYAK G +D A  VF LM+ +D ISW
Sbjct: 393 TAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISW 452

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
            ++IT    +G  E A+  +  MR + I P +    S LS+CA L +L  GQQ+H   +K
Sbjct: 453 NTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVK 512

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGK--EAL 523
            G     SV N+LV +Y +CG +++   +F+SM   DV++W + IMG   + +    E++
Sbjct: 513 WGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNS-IMGVMASSQAPITESV 571

Query: 524 QFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDL 583
           Q +  M+  G  P+ +TFV  L A +   + E  +     M K +G+         ++  
Sbjct: 572 QVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLK-HGVTEDNAVDNALMSC 630

Query: 584 LGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
             +SG +   + L  +M G  DA  W +++S    +G L+
Sbjct: 631 YAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQ 670



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 175/645 (27%), Positives = 291/645 (45%), Gaps = 78/645 (12%)

Query: 55  AGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLD 114
           A ++F+    RD  TWN +++ YA  G                                 
Sbjct: 226 AQRVFDTTPVRDLITWNALMSVYAKRGDA------------------------------- 254

Query: 115 IEAFELFWQMQLEG----YRPSQYTLDNV-----LRLCSLKGLLQRGEQFHGYAIKTCFD 165
           I  F LF  MQ +      RP+++T  ++     L  CSL GLL   +Q     +K+   
Sbjct: 255 ICTFTLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCSL-GLL---DQLFVRVLKSGCS 310

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            + +V + LV  +A+   + EA+ ++    + +N V    +I G  +  +G  A E F  
Sbjct: 311 SDLYVGSALVSAFARHGMLDEAKDIYLGLKE-RNAVTLNGLIAGLVKQQHGEAAAEIFMG 369

Query: 226 MRVEGVESNQFTFPSILTACAAVSARD----FGAQVHGCILSSG-FEANVYVQSALIDMY 280
            R +    N  T+  +L+A A  S  +     G +VH  +L +G     + V + L++MY
Sbjct: 370 AR-DSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMY 428

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
           AKCG +D A R+ +  E  + +SWN++I    + G+ + A+  +  M    I   +F   
Sbjct: 429 AKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAI 488

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
           S L+  A    L   + +H   VK G      V+NAL+ MY + G +   + +FN M   
Sbjct: 489 SGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAH 548

Query: 401 DVISWTSLI-TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           DV+SW S++    +      E+++ FS+M  SG+ P+ V   + L+A   L+VLE G+Q+
Sbjct: 549 DVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQI 608

Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMGCAQNGK 518
           H+V LK G     +VDN+L+  YAK G ++   R+F  M   RD I+W ++I G   NG 
Sbjct: 609 HSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGH 668

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENA--------RWYFESMDKVYGI 570
            +EA+     M+      D+ TF  +L AC+     E          R + ES D V   
Sbjct: 669 LQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLES-DVVV-- 725

Query: 571 KPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAAN 630
                  + ++D+  + G++  A  +   M  + +   W +++S    HG   LG +A  
Sbjct: 726 ------ESALVDMYSKCGRIDYASKVFHSM-SQKNEFSWNSMISGYARHG---LGRKALE 775

Query: 631 NLFELEPMNAMP----YVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
              E++     P    +V + +  S AG  E      +LM+  GI
Sbjct: 776 IFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELMEDYGI 820



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 132/280 (47%), Gaps = 35/280 (12%)

Query: 46  FSNSGEIDEAGQLFEKMSDR-DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSL 104
           ++ SG++D   +LF +MS R D  +WN+MI+ Y  +G L+EA                  
Sbjct: 631 YAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEA------------------ 672

Query: 105 IYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCF 164
                   +D     +  +  ++       T   VL  C+    L+RG + H + +++  
Sbjct: 673 --------MDCVCLMMHSEQMMD-----HCTFSIVLNACASVAALERGMEMHAFGLRSHL 719

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
           + +  V + LVDMY+KC  I  A  +F      KN  +W +MI+GY+++G G KA+E F 
Sbjct: 720 ESDVVVESALVDMYSKCGRIDYASKVFHSMSQ-KNEFSWNSMISGYARHGLGRKALEIFE 778

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
           +M+  G   +  TF S+L+AC+     + G      +   G    +   S +ID+  + G
Sbjct: 779 EMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELMEDYGILPRIEHYSCVIDLLGRAG 838

Query: 285 DLDSARRLLEYSEID-NEVSWNSMIVGFARQGFHKEALSL 323
           +LD  +  ++   +  N + W +++V   +Q  H+  + L
Sbjct: 839 ELDKIQEYMKRMPMKPNTLIWRTVLVA-CQQSKHRAKIDL 877



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 181/391 (46%), Gaps = 40/391 (10%)

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           +H  ++  G   ++++ + L++ YAK   LD+ARR+ +     N VSW  +I G    G 
Sbjct: 87  LHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGL 146

Query: 317 HKEALSLFKKM--HARDIKIDDFTYPSVLN-CFASNID-LNNAKSVHSLIVKTGFEGYKF 372
            ++A  LF+ M       +   FT+ SVL  C  S  D L  A  VH L+ KT F     
Sbjct: 147 PEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTT 206

Query: 373 VNNALIDMYA--KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
           V NALI MY     G    A  VF+    +D+I+W +L++  A  G        F  M+ 
Sbjct: 207 VCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQY 266

Query: 431 --SGI---CPDH----VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
             SGI     +H    ++ ++ LS+C+    L    Q+    LKSG  S L V ++LV  
Sbjct: 267 DDSGIELRPTEHTFGSLITATYLSSCS----LGLLDQLFVRVLKSGCSSDLYVGSALVSA 322

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI-T 540
           +A+ G +++A  ++  +  R+ +T   LI G  +   G+ A + +  M AR +    + T
Sbjct: 323 FARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIF--MGARDSAAVNVDT 380

Query: 541 FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
           +V LL A +    AE             G++ G + +A ++    R+G +    A+ + +
Sbjct: 381 YVVLLSAIAEFSTAEQ------------GLRKGREVHAHVL----RAGHIYRKIAVSNGL 424

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANN 631
           V         A+  ACRV   +E  +R + N
Sbjct: 425 VNMYAKC--GAIDKACRVFQLMEARDRISWN 453



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 156/378 (41%), Gaps = 75/378 (19%)

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
           + +S+H  +VK G     F+ N L++ YAK   LD A  VF+ M  ++ +SWT LI+G  
Sbjct: 83  SPESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHV 142

Query: 414 YHGSYEEALKYFSDM--RISGICPDHVVVSSILSACAE--LTVLEFGQQVHAVFLKSGGC 469
             G  E+A   F  M     G  P      S+L AC +     L F  QVH +  K+   
Sbjct: 143 LSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFT 202

Query: 470 SSLSVDNSLVLVYAKC--GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGK------E 521
           S+ +V N+L+ +Y  C  G    A RVFD+   RD+ITW AL+   A+ G          
Sbjct: 203 SNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFR 262

Query: 522 ALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFES-----MDKVY--GIKPG- 573
           A+Q+ D  +    +P   TF  L+ A            Y  S     +D+++   +K G 
Sbjct: 263 AMQYDDSGIE--LRPTEHTFGSLITAT-----------YLSSCSLGLLDQLFVRVLKSGC 309

Query: 574 -PDHY--ACMIDLLGRSGKLIEAK-------------------ALLDQMVGEPDATV--- 608
             D Y  + ++    R G L EAK                    L+ Q  GE  A +   
Sbjct: 310 SSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMG 369

Query: 609 -----------WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLS------NMYS 651
                      +  LLSA       E G R    +          Y +++      NMY+
Sbjct: 370 ARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYA 429

Query: 652 TAGKWEDAARVRKLMKSR 669
             G  + A RV +LM++R
Sbjct: 430 KCGAIDKACRVFQLMEAR 447



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 40/182 (21%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           ALVD +S  G ID A ++F  MS ++ F+WN+MI+ YA                      
Sbjct: 728 ALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYA---------------------- 765

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG----EQFH 156
                     +GL  +A E+F +MQ  G  P   T  +VL  CS  GL++RG    E   
Sbjct: 766 ---------RHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELME 816

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
            Y I    +  + V    +D+  +   + + +   K  P   N + W T++    Q+ + 
Sbjct: 817 DYGILPRIEHYSCV----IDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHR 872

Query: 217 FK 218
            K
Sbjct: 873 AK 874


>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 262/755 (34%), Positives = 427/755 (56%), Gaps = 2/755 (0%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            Q+ +     + F    +I  Y++ G L  A+ +F++         +++I G+      +
Sbjct: 68  AQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRNQQHM 127

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           E   LF  M       + YT    L+ C+     + G +    A++  F L+ +V + +V
Sbjct: 128 EVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMV 187

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           +   K   + +A+ +F   P+ K+ V W ++I GY Q G  +++I+ F +M   G+  + 
Sbjct: 188 NFLVKRGYLADAQKVFDGMPE-KDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSP 246

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            T  ++L AC     +  G   H  +L+ G   +V+V ++L+DMY+  GD  SA  + + 
Sbjct: 247 VTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDS 306

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               + +SWN+MI G+ + G   E+ +LF+++       D  T  S++   +   DL N 
Sbjct: 307 MCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENG 366

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           + +HS I++   E +  ++ A++DMY+K G +  A +VF  M  K+VI+WT+++ G + +
Sbjct: 367 RILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQN 426

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G  E+ALK F  M+   +  + V + S++  CA L  L  G+ VHA F++ G      + 
Sbjct: 427 GYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVIT 486

Query: 476 NSLVLVYAKCGCINDANRVFDS-MHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
           ++L+ +YAKCG I+ A ++F++  H +DVI   ++IMG   +G G+ AL  Y +M+    
Sbjct: 487 SALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERL 546

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAK 594
           KP+  TFV LL ACSH+GL E  +  F SM++ + ++P   HYAC++DL  R+G+L EA 
Sbjct: 547 KPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEAD 606

Query: 595 ALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAG 654
            L+ QM  +P   V +ALLS CR H +  +G + A+ L  L+ +N+  YV LSN+Y+ A 
Sbjct: 607 ELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIYAEAR 666

Query: 655 KWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIK 714
           KWE    +R LM+ +G++K PG S +E  ++V+ F + D  HP   DIY  ++ + L ++
Sbjct: 667 KWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSWADIYQLLENLRLEVE 726

Query: 715 EAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHT 774
             GY+PD +  L +V E  K   L  HSE+LA+AFGLL+ P G+ I+I KNLRVC DCH 
Sbjct: 727 AEGYIPDTSCVLRDVNEPMKVKLLWGHSERLAIAFGLLSTPCGSLIKITKNLRVCVDCHN 786

Query: 775 AMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             KYIS +  R II+RD+NRFHHF  G CSC D+W
Sbjct: 787 VTKYISKIVQREIIVRDANRFHHFVNGKCSCNDFW 821



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 177/370 (47%), Gaps = 8/370 (2%)

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           +H  I+ +      ++ + LI +Y+  G L  AR + +   +      N+MI GF R   
Sbjct: 66  IHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRNQQ 125

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
           H E   LF+ M + DI+I+ +T    L      +D      +    V+ GF  + +V ++
Sbjct: 126 HMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSS 185

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           +++   K+G L  A  VF+ M +KDV+ W S+I G    G + E+++ F +M   G+ P 
Sbjct: 186 MVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPS 245

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFD 496
            V ++++L AC +  + + G   H+  L  G  + + V  SLV +Y+  G    A  VFD
Sbjct: 246 PVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFD 305

Query: 497 SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAEN 556
           SM +R +I+W A+I G  QNG   E+   + +++  G+  D  T V L+  CS     EN
Sbjct: 306 SMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLEN 365

Query: 557 ARWYFESMDKVYGIKPGPDHY---ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
            R     + +    K    H      ++D+  + G + +A  +  +M G+ +   W A+L
Sbjct: 366 GRILHSCIIR----KELESHLVLSTAIVDMYSKCGAIKQATIVFGRM-GKKNVITWTAML 420

Query: 614 SACRVHGDLE 623
                +G  E
Sbjct: 421 VGLSQNGYAE 430



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 174/380 (45%), Gaps = 40/380 (10%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           +LVD +SN G+   A  +F+ M  R   +WN MI+ Y  +G +                 
Sbjct: 286 SLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIP---------------- 329

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
                          E++ LF ++   G      TL +++R CS    L+ G   H   I
Sbjct: 330 ---------------ESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCII 374

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAI 220
           +   + +  + T +VDMY+KC  I +A  +F      KN + WT M+ G SQNGY   A+
Sbjct: 375 RKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGK-KNVITWTAMLVGLSQNGYAEDAL 433

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
           + F  M+ E V +N  T  S++  CA + +   G  VH   +  G+  +  + SALIDMY
Sbjct: 434 KLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMY 493

Query: 281 AKCGDLDSARRLLEYS-EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           AKCG + SA +L      + + +  NSMI+G+   G  + AL ++ +M    +K +  T+
Sbjct: 494 AKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTF 553

Query: 340 PSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM- 397
            S+L  C  S +        HS+               L+D++++ G L+ A  +   M 
Sbjct: 554 VSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMP 613

Query: 398 --QDKDVISWTSLITGCAYH 415
                DV+   +L++GC  H
Sbjct: 614 FQPSTDVLE--ALLSGCRTH 631



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 125/280 (44%), Gaps = 8/280 (2%)

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
            + S+L+ F++   L + KS+H+ I+K       F+   LI +Y+  G L  A  VF+  
Sbjct: 48  VFSSLLHQFSNT--LIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQC 105

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
              +     ++I G   +  + E  + F  M    I  +       L AC +L   E G 
Sbjct: 106 SLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGM 165

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
           ++    ++ G    L V +S+V    K G + DA +VFD M  +DV+ W ++I G  Q G
Sbjct: 166 EIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKG 225

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY 577
              E++Q + +M+  G +P  +T   LL AC  +GL +       +   V  +  G D +
Sbjct: 226 LFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMC---AHSYVLALGMGNDVF 282

Query: 578 --ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
               ++D+    G    A  + D M      + W A++S 
Sbjct: 283 VLTSLVDMYSNLGDTGSAALVFDSMCSRSLIS-WNAMISG 321


>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
 gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
          Length = 1108

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 272/758 (35%), Positives = 413/758 (54%), Gaps = 12/758 (1%)

Query: 56   GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK-NFFTWSSLIYGYSNYGLD 114
            G+++E    RD    N +I+ YA  G    A  +F    +K +  +W++++    +    
Sbjct: 359  GRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSF 418

Query: 115  IEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD-LNAFVVTG 173
             +    F  M L G  P++ +   +L  CS    L  G + H   +    D + + V T 
Sbjct: 419  GKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATM 478

Query: 174  LVDMYAKCKCIFEAEYLFKMFP-DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
            LV MY KC  I EAE +FK  P   ++ V W  M+  Y+QN    +A     +M   GV 
Sbjct: 479  LVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVL 538

Query: 233  SNQFTFPSILTACAAVSARDFGAQV-HGCILSSGFEANVYVQSALIDMYAKCGDLDSARR 291
             +  +F S+L++C         AQV   CIL SG+  +  +++ALI M+ +C +L+ AR 
Sbjct: 539  PDALSFTSVLSSCYCSQE----AQVLRMCILESGYR-SACLETALISMHGRCRELEQARS 593

Query: 292  LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID 351
            +    +  + VSW +M+   A     KE  +LF++M    +  D FT  + L+   ++  
Sbjct: 594  VFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTT 653

Query: 352  LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
            L   K +H+ + + G E    V NAL++MY+  G+   A   F  M+ +D++SW  +   
Sbjct: 654  LGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAA 713

Query: 412  CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
             A  G  +EA+  F  M++ G+ PD +  S+ L+      ++  G+  HA+  +SG  S 
Sbjct: 714  YAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSD 773

Query: 472  LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
            +SV   LV +YAKCG +++A  +F       V+   A+I   AQ+G  +EA++ + +M  
Sbjct: 774  VSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQ 833

Query: 532  RGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLI 591
             G +PD  T V ++ AC HAG+ E     F +M + +GI P  +HYAC +DLLGR+G+L 
Sbjct: 834  EGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLE 893

Query: 592  EAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYS 651
             A+ ++ +M  E +  VW +LL  C++ GD ELGER A  + EL+P N+  +V LSN+Y 
Sbjct: 894  HAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYC 953

Query: 652  TAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIML 711
              GKW+DA   RK M    ++  PG SW E   QVH F++ DR HP   +IY  +D++ L
Sbjct: 954  ATGKWKDADVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDEIYVVLDKLEL 1013

Query: 712  LIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGD 771
            L++ AGY  D      +VE+E KE  L YHSE++A+AFGL+  P    ++I KNLRVCGD
Sbjct: 1014 LMRRAGYEADKGL---DVEDELKEKALGYHSERIAIAFGLIATPPETTLKIVKNLRVCGD 1070

Query: 772  CHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            CHTA KYIS V  R II+RDS RFHHF  G CSC D W
Sbjct: 1071 CHTATKYISMVMGREIIVRDSLRFHHFSNGTCSCKDCW 1108



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 161/593 (27%), Positives = 284/593 (47%), Gaps = 30/593 (5%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFK---NFFTWSSLIYGYSNYGLDIEAFELFW 122
           D    N +I  Y   G    A  +F     +   +  +W+++I      G   +A  +F 
Sbjct: 264 DPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFR 323

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGL-LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
           +++LEG RP+  TL  +L   +  G+       FHG   ++ +  +  +   ++ MYAKC
Sbjct: 324 RLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKC 383

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF-KAIECFRDMRVEGVESNQFTFPS 240
                A  +F+      + ++W TM+ G S++   F K +  F  M + G++ N+ +F +
Sbjct: 384 GFFSAAWAVFRRIRWKCDVISWNTML-GASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIA 442

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSA----LIDMYAKCGDLDSARRLLEYS 296
           IL AC+   A DFG ++H  IL+   +   YV+S+    L+ MY KCG +  A  + +  
Sbjct: 443 ILNACSNSEALDFGRKIHSLILTRRRD---YVESSVATMLVSMYGKCGSISEAELVFKEM 499

Query: 297 EIDNE--VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLN 353
            + +   V+WN M+  +A+    KEA     +M    +  D  ++ SVL +C+ S     
Sbjct: 500 PLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCS----Q 555

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
            A+ +   I+++G+     +  ALI M+ +   L+ A  VFN M   DV+SWT++++  A
Sbjct: 556 EAQVLRMCILESGYRS-ACLETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATA 614

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
            +  ++E    F  M++ G+ PD   +++ L  C   T L  G+ +HA   + G  + ++
Sbjct: 615 ENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIA 674

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
           V+N+L+ +Y+ CG   +A   F++M  RD+++W  +    AQ G  KEA+  + QM   G
Sbjct: 675 VENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEG 734

Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
            KPD +TF   L     + L  + +  F ++    G+         ++ L  + GKL EA
Sbjct: 735 VKPDKLTFSTTLNVSGGSALVSDGK-LFHALAAESGLDSDVSVATGLVKLYAKCGKLDEA 793

Query: 594 KALLDQMVGEPDATV--WKALLSACRVHGDLELGERAANNLFELEPMNAMPYV 644
            +L     G  D TV    A++ A   HG     E A    ++++     P V
Sbjct: 794 MSLFR---GACDWTVVLLNAIIGALAQHG---FSEEAVKMFWKMQQEGVRPDV 840



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 139/503 (27%), Positives = 235/503 (46%), Gaps = 25/503 (4%)

Query: 59  FEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSN-YGLDIEA 117
            E+ S       N MI  YA  G L +A  +F   P K+  +W+++   Y+       +A
Sbjct: 158 LERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDA 217

Query: 118 FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
             +F +M L+   P+  T    L  C+    L+ G   H    +     +      L++M
Sbjct: 218 LRIFREMLLQPLAPNVITFITALGACT---SLRDGTWLHSLLHEASLGFDPLASNALINM 274

Query: 178 YAKCKCIFEAEYLFKMFPDGK--NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           Y KC     A  +FK     +  + V+W  MI+   + G    A+  FR +R+EG+  N 
Sbjct: 275 YGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNS 334

Query: 236 FTFPSILTACAAVSARDFGAQ--VHGCILSSGFEANVYVQSALIDMYAKCGDLDSA---- 289
            T  +IL A AA S  DFGA    HG I  SG+  +V + +A+I MYAKCG   +A    
Sbjct: 335 VTLITILNALAA-SGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVF 393

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
           RR+    ++   +SWN+M+     +    + ++ F  M    I  +  ++ ++LN  +++
Sbjct: 394 RRIRWKCDV---ISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNS 450

Query: 350 IDLNNAKSVHSLIVKTGFEGY--KFVNNALIDMYAKQGNLDCAFMVFNLM--QDKDVISW 405
             L+  + +HSLI+ T    Y    V   L+ MY K G++  A +VF  M    + +++W
Sbjct: 451 EALDFGRKIHSLIL-TRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTW 509

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
             ++   A +   +EA     +M   G+ PD +  +S+LS+C      +  Q +    L+
Sbjct: 510 NVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC---YCSQEAQVLRMCILE 566

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
           S G  S  ++ +L+ ++ +C  +  A  VF+ M   DV++WTA++   A+N   KE    
Sbjct: 567 S-GYRSACLETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNL 625

Query: 526 YDQMLARGTKPDYITFVGLLFAC 548
           + +M   G  PD  T    L  C
Sbjct: 626 FRRMQLEGVIPDKFTLATTLDTC 648



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 245/503 (48%), Gaps = 44/503 (8%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           +L+ C     L +G+  H        + + F+   L++MY +C  + EA  +F    + +
Sbjct: 31  LLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEE-R 89

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES-NQFTFPSILTACAAVSARDFGAQV 257
           N V+WT +I+  +Q G   +A   FR M +E   + N +T  ++L ACA       G  +
Sbjct: 90  NVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSI 149

Query: 258 HGCILSSGFE----ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           H  I   G E        V +A+I+MYAKCG L+ A  +       + VSW +M   +A+
Sbjct: 150 HAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQ 209

Query: 314 Q-GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
           +  F+ +AL +F++M  + +  +  T+ + L    S   L +   +HSL+ +        
Sbjct: 210 ERRFYPDALRIFREMLLQPLAPNVITFITALGACTS---LRDGTWLHSLLHEASLGFDPL 266

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLM---QDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
            +NALI+MY K G+ + A+ VF  M   Q+ D++SW ++I+     G + +A+  F  +R
Sbjct: 267 ASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLR 326

Query: 430 ISGICPDHVVVSSILSACAELTVLEFG--QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           + G+ P+ V + +IL+A A   V +FG  +  H    +SG    + + N+++ +YAKCG 
Sbjct: 327 LEGMRPNSVTLITILNALAASGV-DFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGF 385

Query: 488 INDANRVFDSMHTR-DVITWTALIMGCAQNGK--GKEALQFYDQMLARGTKPDYITFVGL 544
            + A  VF  +  + DVI+W  + +G +++ K  GK    F+  +LA G  P+ ++F+ +
Sbjct: 386 FSAAWAVFRRIRWKCDVISWNTM-LGASEDRKSFGKVVNTFHHMLLA-GIDPNKVSFIAI 443

Query: 545 LFACS-----------HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
           L ACS           H+ +    R Y ES                ++ + G+ G + EA
Sbjct: 444 LNACSNSEALDFGRKIHSLILTRRRDYVESSVATM-----------LVSMYGKCGSISEA 492

Query: 594 KALLDQM-VGEPDATVWKALLSA 615
           + +  +M +       W  +L A
Sbjct: 493 ELVFKEMPLPSRSLVTWNVMLGA 515



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 172/325 (52%), Gaps = 12/325 (3%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           + ++L +C   +    G   H  I ++G E ++++ + LI+MY +CG L+ A  +    E
Sbjct: 28  YTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR-DIKIDDFTYPSVLNCFASNIDLNNAK 356
             N VSW ++I   A+ G    A +LF+ M        + +T  ++LN  A++ DL   +
Sbjct: 88  ERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147

Query: 357 SVHSLIVKTGFE----GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
           S+H++I + G E        V NA+I+MYAK G+L+ A  VF  + +KDV+SWT++    
Sbjct: 148 SIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAY 207

Query: 413 AYHGS-YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
           A     Y +AL+ F +M +  + P+ +   + L AC   T L  G  +H++  ++     
Sbjct: 208 AQERRFYPDALRIFREMLLQPLAPNVITFITALGAC---TSLRDGTWLHSLLHEASLGFD 264

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTR---DVITWTALIMGCAQNGKGKEALQFYDQ 528
               N+L+ +Y KCG    A  VF +M +R   D+++W A+I    + G+  +A+  + +
Sbjct: 265 PLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRR 324

Query: 529 MLARGTKPDYITFVGLLFACSHAGL 553
           +   G +P+ +T + +L A + +G+
Sbjct: 325 LRLEGMRPNSVTLITILNALAASGV 349



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 171/345 (49%), Gaps = 23/345 (6%)

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
           D   D   Y ++L     + DL   K  H LI   G E + F+ N LI+MY + G+L+ A
Sbjct: 20  DRAADLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEA 79

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI-SGICPDHVVVSSILSACAE 449
             +F+ M++++V+SWT+LI+  A  G++  A   F  M + S   P+   + ++L+ACA 
Sbjct: 80  HAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACAN 139

Query: 450 LTVLEFGQQVHAVF----LKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
              L  G+ +HA+     L+    ++  V N+++ +YAKCG + DA  VF ++  +DV++
Sbjct: 140 SRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVS 199

Query: 506 WTALIMGCAQNGKG-KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESM 564
           WTA+    AQ  +   +AL+ + +ML +   P+ ITF+  L AC+      +  W    +
Sbjct: 200 WTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTS---LRDGTWLHSLL 256

Query: 565 DKV-YGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG--EPDATVWKALLSA---CRV 618
            +   G  P   +   +I++ G+ G    A ++   M    E D   W A++SA      
Sbjct: 257 HEASLGFDPLASN--ALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGR 314

Query: 619 HGDLELGERAANNLFELEPM--NAMPYVQLSNMYSTAGKWEDAAR 661
           HGD      A      LE M  N++  + + N  + +G    AAR
Sbjct: 315 HGD----AMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAAR 355



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 131/309 (42%), Gaps = 47/309 (15%)

Query: 17  SKIIGPARYTHNVGNSVKPASDL---NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTM 73
           S  +G  +  H     +   +D+   N  L  +SN G+  EA   FE M  RD  +WN M
Sbjct: 651 STTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIM 710

Query: 74  IAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQ 133
            AAYA +G  +EA  LF                                QMQLEG +P +
Sbjct: 711 SAAYAQAGLAKEAVLLFR-------------------------------QMQLEGVKPDK 739

Query: 134 YTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKM 193
            T    L +     L+  G+ FH  A ++  D +  V TGLV +YAKC  + EA  LF+ 
Sbjct: 740 LTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRG 799

Query: 194 FPDGKNHVAWTT-----MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
             D      WT      +I   +Q+G+  +A++ F  M+ EGV  +  T  SI++AC   
Sbjct: 800 ACD------WTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHA 853

Query: 249 SARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI-DNEVSWNS 306
              + G      +    G    +   +  +D+  + G L+ A +++      DN + W S
Sbjct: 854 GMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTS 913

Query: 307 MIVGFARQG 315
           ++     QG
Sbjct: 914 LLGTCKLQG 922


>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
 gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
          Length = 675

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 273/742 (36%), Positives = 415/742 (55%), Gaps = 79/742 (10%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
            ++ T +A +  + RL +A+ +F++ P  N   ++ +I GY+      +A +LF +M   
Sbjct: 13  LSYTTSLANHLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRM--- 69

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
                  ++ +V+   S+              IK C D               C  +  A
Sbjct: 70  -------SVRDVVSWNSM--------------IKGCLD---------------CGNLGMA 93

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             LF   P+ KN ++WTTM+ GY + G    A   F DM V+ V +              
Sbjct: 94  TRLFDEMPE-KNVISWTTMVNGYLKFGRVELAQRLFLDMHVKDVAA-------------- 138

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
                + A VHG                    Y + G ++   RL E   + + +SW SM
Sbjct: 139 -----WNAMVHG--------------------YFENGRVEEGVRLFEEMPVRDVISWTSM 173

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I G    G  +EAL +FKKM    ++    T+  VL+  A+ ++ N    VH  +VK G 
Sbjct: 174 IGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGC 233

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
             ++F++ +LI  YA    ++ A  +FN    K+V+ WT+L+T   ++  +++AL+ F D
Sbjct: 234 FFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGD 293

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           M   G  P+    S  L AC  L  L+ G+++H + +K G  + + V NSLV++Y +CG 
Sbjct: 294 MTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGN 353

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           +N A  VF +++ +D+++W ++I+G AQ+G G  AL F++QM+ RG  P+ ITF GLL A
Sbjct: 354 VNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSA 413

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
           CS +G+    R +FE + +       P HYACM+D+LGR GKL EA+ L+  M  + ++ 
Sbjct: 414 CSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSM 473

Query: 608 VWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
           +W ALLSACRVH +LE+ ERAA ++ +LEP  +  YV LSN+Y++AG+W D +R+R  MK
Sbjct: 474 IWLALLSACRVHSNLEVAERAAKHILDLEPNCSSAYVLLSNIYASAGRWADVSRMRVKMK 533

Query: 668 SRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALH 727
             G+ K+PG SWV    + H F+S DR HPL   IY K+D +   +KE GYVPD  FALH
Sbjct: 534 QGGLVKQPGSSWVVLRGKKHEFLSADRSHPLSERIYEKLDWLGKKLKEFGYVPDQKFALH 593

Query: 728 NVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHI 787
           +VE+E KE  L++HSE+LA+AFGL++  +G+ I + KNLRVCGDCH+ +K +S +  R I
Sbjct: 594 DVEDEQKEEMLSFHSERLAIAFGLVSTVEGSTITVMKNLRVCGDCHSVIKLMSKIVGRKI 653

Query: 788 ILRDSNRFHHFKAGNCSCGDYW 809
           ++RDS RFHHFK G CSC DYW
Sbjct: 654 VVRDSGRFHHFKNGICSCSDYW 675



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/494 (26%), Positives = 235/494 (47%), Gaps = 19/494 (3%)

Query: 23  ARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGR 82
            RYT  +  S   +      L +   +  +D+A  +F+K+   +   +  MIA Y  + R
Sbjct: 5   TRYTRTITLSYTTS------LANHLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDR 58

Query: 83  LREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRL 142
           L +A KLF+    ++  +W+S+I G  + G    A  LF +M  +        ++  L+ 
Sbjct: 59  LCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMPEKNVISWTTMVNGYLKF 118

Query: 143 CSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVA 202
             ++ L QR   F    +K     NA     +V  Y +   + E   LF+  P  ++ ++
Sbjct: 119 GRVE-LAQR--LFLDMHVKDVAAWNA-----MVHGYFENGRVEEGVRLFEEMPV-RDVIS 169

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
           WT+MI G   NG   +A+  F+ M   GVE    TF  +L+ACA     + G QVHG ++
Sbjct: 170 WTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVV 229

Query: 263 SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
             G   + ++  +LI  YA C  ++ A ++   +   N V W +++  +     H++AL 
Sbjct: 230 KLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALR 289

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYA 382
           +F  M       +  T+   L        L+  K +H++ +K G E   FV N+L+ MY 
Sbjct: 290 VFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYT 349

Query: 383 KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
           + GN++ A  VF  + +KD++SW S+I G A HG    AL +F+ M   G+ P+ +  + 
Sbjct: 350 ECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTG 409

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLVLVYAKCGCINDANRVFDSMHT 500
           +LSAC+   +L  G+     ++     + L   +   +V +  +CG +++A  +   M  
Sbjct: 410 LLSACSRSGMLLKGRCFFE-YISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPV 468

Query: 501 R-DVITWTALIMGC 513
           + + + W AL+  C
Sbjct: 469 KANSMIWLALLSAC 482



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 184/376 (48%), Gaps = 7/376 (1%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS 109
           G ++ A +LF  M  +D   WN M+  Y  +GR+ E  +LF E P ++  +W+S+I G  
Sbjct: 119 GRVELAQRLFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLD 178

Query: 110 NYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAF 169
             G   EA  +F +M   G  P+  T   VL  C+       G Q HG+ +K     + F
Sbjct: 179 LNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEF 238

Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPD--GKNHVAWTTMITGYSQNGYGFKAIECFRDMR 227
           +   L+  YA C    + E+  K+F +   KN V WT ++T Y  N     A+  F DM 
Sbjct: 239 ISVSLITFYANC---MKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDALRVFGDMT 295

Query: 228 VEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLD 287
             G   NQ TF   L AC  + A D G ++H   +  G E +V+V ++L+ MY +CG+++
Sbjct: 296 KMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVN 355

Query: 288 SARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFA 347
           SA  +       + VSWNS+IVG A+ GF   AL  F +M  R +  ++ T+  +L+  +
Sbjct: 356 SAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACS 415

Query: 348 SNIDLNNAKSVHSLIVKTGFEGYKFVNNA-LIDMYAKQGNLDCAFMVFNLMQDK-DVISW 405
            +  L   +     I +      +  + A ++D+  + G LD A  +   M  K + + W
Sbjct: 416 RSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIW 475

Query: 406 TSLITGCAYHGSYEEA 421
            +L++ C  H + E A
Sbjct: 476 LALLSACRVHSNLEVA 491


>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 264/720 (36%), Positives = 404/720 (56%), Gaps = 3/720 (0%)

Query: 92  ETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQR 151
           E+   N    S LI  Y       +A +++  M+        + + +VL+ C L      
Sbjct: 83  ESYSSNAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLL 142

Query: 152 GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYS 211
           G++ HG+ +K  F  + FV   L+ MY++   +  A  LF    + K+ V+W+TMI  Y 
Sbjct: 143 GQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKI-ENKDVVSWSTMIRSYD 201

Query: 212 QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF--EAN 269
           ++G   +A++  RDM V  V+ ++    SI    A ++    G  +H  ++ +G   ++ 
Sbjct: 202 RSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSG 261

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA 329
           V + +ALIDMY KC +L  ARR+ +     + +SW +MI  +       E + LF KM  
Sbjct: 262 VPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLG 321

Query: 330 RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDC 389
             +  ++ T  S++    +   L   K +H+  ++ GF     +  A IDMY K G++  
Sbjct: 322 EGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRS 381

Query: 390 AFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE 449
           A  VF+  + KD++ W+++I+  A +   +EA   F  M   GI P+   + S+L  CA+
Sbjct: 382 ARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAK 441

Query: 450 LTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTAL 509
              LE G+ +H+   K G    + +  S V +YA CG I+ A+R+F     RD+  W A+
Sbjct: 442 AGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAM 501

Query: 510 IMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG 569
           I G A +G G+ AL+ +++M A G  P+ ITF+G L ACSH+GL +  +  F  M   +G
Sbjct: 502 ISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFG 561

Query: 570 IKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAA 629
             P  +HY CM+DLLGR+G L EA  L+  M   P+  V+ + L+AC++H +++LGE AA
Sbjct: 562 FTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAA 621

Query: 630 NNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIF 689
                LEP  +   V +SN+Y++A +W D A +R+ MK  GI KEPG S +E N  +H F
Sbjct: 622 KQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEF 681

Query: 690 ISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAF 749
           I  DR HP    +Y  IDE+   +++AGY PD++  LHN+++E K   L YHSEKLA+A+
Sbjct: 682 IMGDREHPDAKKVYEMIDEMREKLEDAGYTPDVSCVLHNIDKEKKVSALNYHSEKLAMAY 741

Query: 750 GLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           GL++   G PIRI KNLRVC DCH A K +S +Y R II+RD NRFHHFK G+CSC DYW
Sbjct: 742 GLISTAPGVPIRIVKNLRVCDDCHNATKLLSKIYGREIIVRDRNRFHHFKEGSCSCCDYW 801



 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 224/452 (49%), Gaps = 5/452 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N +I  Y+  G L  A+ LF++   K+  +WS++I  Y   GL  EA +L   M 
Sbjct: 158 DVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMH 217

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT--CFDLNAFVVTGLVDMYAKCKC 183
           +   +PS+  + ++  + +    L+ G+  H Y ++   C      + T L+DMY KC+ 
Sbjct: 218 VMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCEN 277

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +  A  +F       + ++WT MI  Y       + +  F  M  EG+  N+ T  S++ 
Sbjct: 278 LAYARRVFDGLSKA-SIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVK 336

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
            C    A + G  +H   L +GF  ++ + +A IDMY KCGD+ SAR + +  +  + + 
Sbjct: 337 ECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMM 396

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           W++MI  +A+     EA  +F  M    I+ ++ T  S+L   A    L   K +HS I 
Sbjct: 397 WSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYID 456

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K G +G   +  + +DMYA  G++D A  +F    D+D+  W ++I+G A HG  E AL+
Sbjct: 457 KQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALE 516

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV-HAVFLKSGGCSSLSVDNSLVLVY 482
            F +M   G+ P+ +     L AC+   +L+ G+++ H +  + G    +     +V + 
Sbjct: 517 LFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLL 576

Query: 483 AKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
            + G +++A+ +  SM  R ++  + + +  C
Sbjct: 577 GRAGLLDEAHELIKSMPMRPNIAVFGSFLAAC 608



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 175/348 (50%), Gaps = 5/348 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
             +I  Y     L  A+++F+     +  +W+++I  Y +     E   LF +M  EG  
Sbjct: 266 TALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMF 325

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P++ T+ ++++ C   G L+ G+  H + ++  F L+  + T  +DMY KC  +  A  +
Sbjct: 326 PNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSV 385

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F  F   K+ + W+ MI+ Y+QN    +A + F  M   G+  N+ T  S+L  CA   +
Sbjct: 386 FDSF-KSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGS 444

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIV 309
            + G  +H  I   G + ++ ++++ +DMYA CGD+D+A RL   +  D ++S WN+MI 
Sbjct: 445 LEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEA-TDRDISMWNAMIS 503

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFE 368
           GFA  G  + AL LF++M A  +  +D T+   L+ C  S +     +  H ++ + GF 
Sbjct: 504 GFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFT 563

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYH 415
                   ++D+  + G LD A  +   M  +  I+ + S +  C  H
Sbjct: 564 PKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLH 611



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 135/288 (46%), Gaps = 7/288 (2%)

Query: 13  LRCRSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNT 72
           + C +   G   +   +G  + P      +LV    +    E G+L    + R+GFT + 
Sbjct: 304 IHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSL 363

Query: 73  MIAA-----YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           ++A      Y   G +R A+ +F+    K+   WS++I  Y+      EAF++F  M   
Sbjct: 364 VLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGC 423

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G RP++ T+ ++L +C+  G L+ G+  H Y  K     +  + T  VDMYA C  I  A
Sbjct: 424 GIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTA 483

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             LF    D ++   W  MI+G++ +G+G  A+E F +M   GV  N  TF   L AC+ 
Sbjct: 484 HRLFAEATD-RDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSH 542

Query: 248 VSARDFGAQV-HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
                 G ++ H  +   GF   V     ++D+  + G LD A  L++
Sbjct: 543 SGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIK 590


>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 257/740 (34%), Positives = 420/740 (56%), Gaps = 5/740 (0%)

Query: 71   NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
            N++I+ + N   + EA ++FN    ++  +W+S+I   ++ G   E+   F+ M+    +
Sbjct: 390  NSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPK 449

Query: 131  PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
                T+  +L  C     L+ G   HG   K+  + N  V   L+ MYA+     +AE +
Sbjct: 450  TDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELV 509

Query: 191  FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
            F   P  ++ ++W +M+  + ++G    AI    +M       N  TF + L+AC  +  
Sbjct: 510  FHTMP-ARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEK 568

Query: 251  RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
                  VH  ++      N+ + + L+ MY K G +D A+++ +     + V+WN++I G
Sbjct: 569  LKI---VHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGG 625

Query: 311  FARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTGFEG 369
             A        +  F  M    +  +  T  ++L  C + +  L +   +H+ IV  GFE 
Sbjct: 626  HADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFEL 685

Query: 370  YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
              +V ++LI MYA+ G+L+ +  +F+++ +K+  +W ++ +  A++G  EEALK+ + MR
Sbjct: 686  DTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMR 745

Query: 430  ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
              G+  D    S  L+    LTVL+ GQQ+H+  +K G      V N+ + +Y KCG I+
Sbjct: 746  NDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEID 805

Query: 490  DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
            D  R+      R   +W  LI   A++G  ++A + + +ML  G KPD++TFV LL ACS
Sbjct: 806  DVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACS 865

Query: 550  HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
            H GL +    YF SM   +G+    +H  C+IDLLGRSG+L EA+  +D+M   P+  VW
Sbjct: 866  HGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVW 925

Query: 610  KALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
            ++LL+AC+VHG+LELG +AA+ LFEL   +   YV  SN+ ++  +W D   VRK M+S+
Sbjct: 926  RSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQ 985

Query: 670  GIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNV 729
             ++K+P CSW++  ++V  F   D+ HP    IY+K++E+  + +E G++PD ++AL + 
Sbjct: 986  SLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEELRKMTREEGHMPDTSYALQDT 1045

Query: 730  EEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIIL 789
            +EE KE  L  HSE++A+AFGL+   +G+P+RIFKNLRVCGDCH+  K +S +  R I++
Sbjct: 1046 DEEQKEHNLWNHSERIALAFGLINSAEGSPLRIFKNLRVCGDCHSVFKLVSKIVGRKIVV 1105

Query: 790  RDSNRFHHFKAGNCSCGDYW 809
            RDS RFHHF  G CSC DYW
Sbjct: 1106 RDSYRFHHFHGGKCSCSDYW 1125



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 156/561 (27%), Positives = 272/561 (48%), Gaps = 7/561 (1%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           ++ F  NT++  Y+  G ++ A+ +F++   +N  +W+++I G+   G   +A + F  M
Sbjct: 180 QNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHM 239

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRG-EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
              G  PS Y + +++  C   G +  G  Q HGY +K     N FV T L+  Y     
Sbjct: 240 FENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGS 299

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + EA  LF+   +  N V+WT+++  Y+ NG+  + +  +R +R  G+     T  +++ 
Sbjct: 300 VSEANKLFEEIEE-PNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIR 358

Query: 244 ACAAVSARDFGAQVHGCILSSGFE-ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
            C     +  G Q+ G ++ SG + ++V V ++LI M+     ++ A R+    +  + +
Sbjct: 359 TCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTI 418

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SWNS+I   A  G  +E+L  F  M     K D  T  ++L    S   L   + +H LI
Sbjct: 419 SWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLI 478

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
            K+G E    V N+L+ MYA+ G+ + A +VF+ M  +D+ISW S++      G Y  A+
Sbjct: 479 TKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAI 538

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
               +M  +    ++V  ++ LSAC  L  L+    VHA  +      +L + N+LV +Y
Sbjct: 539 LLLVEMLKTRKAMNYVTFTTALSACYNLEKLKI---VHAFVIHFAVHHNLIIGNTLVTMY 595

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
            K G +++A +V   M  RDV+TW ALI G A +      +Q ++ M   G   +YIT V
Sbjct: 596 GKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIV 655

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
            LL  C              +   V G +      + +I +  + G L  +  + D ++ 
Sbjct: 656 NLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFD-VLA 714

Query: 603 EPDATVWKALLSACRVHGDLE 623
             +++ W A+ SA   +G  E
Sbjct: 715 NKNSSTWNAIFSANAHYGPGE 735



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 139/473 (29%), Positives = 242/473 (51%), Gaps = 26/473 (5%)

Query: 152 GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYS 211
           G+  H   +K     N F    LV+MY+K   I  A+++F    D +N  +W  MI+G+ 
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYD-RNDASWNNMISGFV 224

Query: 212 QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGA-QVHGCILSSGFEANV 270
           + G+  KA++ F  M   GV  + +   S++TAC        GA Q+HG ++  G  +NV
Sbjct: 225 RVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNV 284

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
           +V ++L+  Y   G +  A +L E  E  N VSW S++V +A  G  KE L++++ +   
Sbjct: 285 FVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHN 344

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF-VNNALIDMYAKQGNLDC 389
            +     T  +V+       D      +   ++K+G +     V N+LI M+    +++ 
Sbjct: 345 GLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEE 404

Query: 390 AFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE 449
           A  VFN MQ++D ISW S+IT  A++G +EE+L +F  MR +    D++ +S++L AC  
Sbjct: 405 ASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGS 464

Query: 450 LTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTAL 509
              L++G+ +H +  KSG  S++ V NSL+ +YA+ G   DA  VF +M  RD+I+W ++
Sbjct: 465 AQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSM 524

Query: 510 IMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG 569
           +    ++GK   A+    +ML      +Y+TF   L AC              +++K+  
Sbjct: 525 MASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACY-------------NLEKLKI 571

Query: 570 IKPGPDHYAC---------MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
           +     H+A          ++ + G+ G + EA+ +  +++ E D   W AL+
Sbjct: 572 VHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVC-KIMPERDVVTWNALI 623



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 163/640 (25%), Positives = 291/640 (45%), Gaps = 48/640 (7%)

Query: 25  YTHNVGNSVKPASDLNRALVDFSN-SGEIDEAGQLFEKMSDRDGFTWNTMIAA-----YA 78
           + H   N V P+S +  ++V   + SG + E  +       + G   N  +       Y 
Sbjct: 236 FCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYG 295

Query: 79  NSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDN 138
             G + EA KLF E    N  +W+SL+  Y++ G   E   ++  ++  G   +  T+  
Sbjct: 296 THGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMAT 355

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAF-VVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           V+R C + G    G Q  G  IK+  D ++  V   L+ M+     + EA  +F    + 
Sbjct: 356 VIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQE- 414

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           ++ ++W ++IT  + NG   +++  F  MR    +++  T  ++L AC +     +G  +
Sbjct: 415 RDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGL 474

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           HG I  SG E+NV V ++L+ MYA+ G  + A  +       + +SWNSM+      G +
Sbjct: 475 HGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKY 534

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
             A+ L  +M      ++  T+ + L+ C+    +L   K VH+ ++         + N 
Sbjct: 535 SHAILLLVEMLKTRKAMNYVTFTTALSACY----NLEKLKIVHAFVIHFAVHHNLIIGNT 590

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           L+ MY K G +D A  V  +M ++DV++W +LI G A        ++ F+ MR  G+  +
Sbjct: 591 LVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSN 650

Query: 437 HVVVSSILSACAELT-VLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           ++ + ++L  C     +L+ G  +HA  + +G      V +SL+ +YA+CG +N ++ +F
Sbjct: 651 YITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIF 710

Query: 496 DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAE 555
           D +  ++  TW A+    A  G G+EAL+F  +M   G   D  +F   L    +  + +
Sbjct: 711 DVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLD 770

Query: 556 NAR----WYFE---------------------SMDKVYGIKPGPD-----HYACMIDLLG 585
             +    W  +                      +D V+ I P P       +  +I  L 
Sbjct: 771 EGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALA 830

Query: 586 RSGKLIEAKALLDQMVG---EPDATVWKALLSACRVHGDL 622
           R G   +A     +M+    +PD   + +LLSAC  HG L
Sbjct: 831 RHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACS-HGGL 869



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 203/417 (48%), Gaps = 24/417 (5%)

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           + +S  + G  +H   +    + N +  + L++MY+K G +  A+ + +     N+ SWN
Sbjct: 158 SEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWN 217

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVK 364
           +MI GF R G++ +A+  F  M    +    +   S++  C  S      A+ +H  +VK
Sbjct: 218 NMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVK 277

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            G     FV  +L+  Y   G++  A  +F  +++ +++SWTSL+   A +G  +E L  
Sbjct: 278 CGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNI 337

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG-GCSSLSVDNSLVLVYA 483
           +  +R +G+      +++++  C        G Q+    +KSG   SS+SV NSL+ ++ 
Sbjct: 338 YRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFG 397

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
               + +A+RVF++M  RD I+W ++I   A NG+ +E+L  +  M     K DYIT   
Sbjct: 398 NYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISA 457

Query: 544 LLFACSHAGLAENARWYFESMDKVYGI--KPGPDHYAC----MIDLLGRSGKLIEAKALL 597
           LL AC   G A++ +W       ++G+  K G +   C    ++ +  ++G   +A+ + 
Sbjct: 458 LLPAC---GSAQHLKW----GRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVF 510

Query: 598 DQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM---NAMPYVQLSNMYS 651
             M    D   W +++++      +E G+ +   L  +E +    AM YV  +   S
Sbjct: 511 HTMPAR-DLISWNSMMAS-----HVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALS 561



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 125/255 (49%), Gaps = 9/255 (3%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +  +++I  YA  G L  +  +F+    KN  TW+++    ++YG   EA +   +M+
Sbjct: 686 DTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMR 745

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            +G    Q++    L       +L  G+Q H + IK  F+L+ +V+   +DMY KC    
Sbjct: 746 NDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCG--- 802

Query: 186 EAEYLFKMFPDGK--NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           E + +F++ P  K  +  +W  +I+  +++G+  +A E F +M   G++ +  TF S+L+
Sbjct: 803 EIDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLS 862

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQS--ALIDMYAKCGDLDSARRLLEYSEI-DN 300
           AC+     D G  V+   ++S F     ++    +ID+  + G L  A   ++   +  N
Sbjct: 863 ACSHGGLVDEGL-VYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPN 921

Query: 301 EVSWNSMIVGFARQG 315
           E  W S++      G
Sbjct: 922 EFVWRSLLAACKVHG 936


>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
          Length = 746

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 265/685 (38%), Positives = 387/685 (56%), Gaps = 9/685 (1%)

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT-CFDLNAFVVTGLVDMYAKCKCIFEAE 188
           RP  +T   ++R            Q H  A++      N F    LV  Y +   + EA 
Sbjct: 66  RPDSFTFPPLVRAAPGPA---SAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAY 122

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
            +F   P+ ++  AW  M++G  +N     A+     M  EGV  +  T  S+L  C  +
Sbjct: 123 RVFDEMPE-RDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVL 181

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
             R     +H   +  G    ++V +ALID+Y K G L  A  +     + + V+WNS+I
Sbjct: 182 GDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSII 241

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
               + G    A+ LF  M    +  D  T  S+ +  A   D   AKSVH  + + G++
Sbjct: 242 SANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWD 301

Query: 369 -GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
            G     NA++DMYAK   +D A  VF+ + D+DV+SW +LITG   +G   EA++ ++D
Sbjct: 302 VGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYND 361

Query: 428 MR-ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
           M    G+ P      S+L A + L  L+ G ++HA+ +K+G    + V   L+ +YAKCG
Sbjct: 362 MHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCG 421

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
            + +A  +F+ M  R    W A+I G   +G G +AL  + QM     KPD++TFV LL 
Sbjct: 422 KLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLA 481

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ACSHAGL +  R +F+ M  VYGI P   HY CM+D+LGR+G+L EA   +  M  +PD+
Sbjct: 482 ACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDS 541

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
            VW ALL ACR+HG++E+G+ A+ NLFEL+P N   YV +SNMY+  GKW+    VR L+
Sbjct: 542 AVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLV 601

Query: 667 KSRGIRKEPGCSWVETNSQVHIFIS--EDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
           + + ++K PG S +E    V +F S  +   HP   +I   + +++  +K AGYVPD +F
Sbjct: 602 RRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAGYVPDYSF 661

Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
            L +VEE+ KE  L  HSE+LA+AFG++  P G P+ I+KNLRVCGDCH+A KYIS +  
Sbjct: 662 VLQDVEEDEKEQILNNHSERLAIAFGIINTPPGTPLHIYKNLRVCGDCHSATKYISKITE 721

Query: 785 RHIILRDSNRFHHFKAGNCSCGDYW 809
           R II+RD+NRFHHFK G+CSCGD+W
Sbjct: 722 REIIVRDANRFHHFKDGHCSCGDFW 746



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 132/464 (28%), Positives = 223/464 (48%), Gaps = 8/464 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F   +++ AY   GR+ EA ++F+E P ++   W++++ G        +A  L  +M  E
Sbjct: 103 FASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGE 162

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G      TL +VL +C + G        H YA+K       FV   L+D+Y K   + EA
Sbjct: 163 GVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEA 222

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
            ++F      ++ V W ++I+   Q G    A+E F  M   GV  +  T  S+ +A A 
Sbjct: 223 HWVFGGMAL-RDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQ 281

Query: 248 VSARDFGAQVHGCILSSGFE-ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
                    VH  +   G++  ++   +A++DMYAK   +D+A+++ +     + VSWN+
Sbjct: 282 CGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNT 341

Query: 307 MIVGFARQGFHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +I G+ + G   EA+ ++  MH  + +K    T+ SVL  ++    L     +H+L +KT
Sbjct: 342 LITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKT 401

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G     +V   LID+YAK G L  A  +F  M  +    W ++I G   HG   +AL  F
Sbjct: 402 GLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLF 461

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LVLVYAK 484
           S M+   I PDHV   S+L+AC+   +++ G+    +     G   ++   + +V +  +
Sbjct: 462 SQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGR 521

Query: 485 CGCINDANRVFDSMHTR-DVITWTALIMGCAQNGK---GKEALQ 524
            G +++A     SM  + D   W AL+  C  +G    GK A Q
Sbjct: 522 AGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQ 565



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 131/270 (48%), Gaps = 34/270 (12%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           A+VD ++   +ID A ++F+ + DRD  +WNT+I  Y  +G   EA +++N+        
Sbjct: 310 AMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDM------- 362

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
                    N+               EG +P Q T  +VL   S  G LQ+G + H  +I
Sbjct: 363 --------HNH---------------EGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSI 399

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAI 220
           KT  +L+ +V T L+D+YAKC  + EA +LF+  P  ++   W  +I G   +G+G KA+
Sbjct: 400 KTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPR-RSTGPWNAIIAGLGVHGHGAKAL 458

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDM 279
             F  M+ E ++ +  TF S+L AC+     D G      + +  G        + ++DM
Sbjct: 459 SLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDM 518

Query: 280 YAKCGDLDSARRLLEYSEIDNEVS-WNSMI 308
             + G LD A   ++   I  + + W +++
Sbjct: 519 LGRAGQLDEAFEFIQSMPIKPDSAVWGALL 548



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 101/247 (40%), Gaps = 38/247 (15%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +    +I  YA  G+L EA  LF   P ++   W+++I G   +G   +A  LF QMQ
Sbjct: 406 DVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQ 465

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            E  +P   T  ++L  CS  GL+ +G  F        FDL                   
Sbjct: 466 QEEIKPDHVTFVSLLAACSHAGLVDQGRSF--------FDL------------------- 498

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
             + ++ + P  K+   +T M+    + G   +A E  + M    ++ +   + ++L AC
Sbjct: 499 -MQTVYGIVPIAKH---YTCMVDMLGRAGQLDEAFEFIQSMP---IKPDSAVWGALLGAC 551

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD---LDSARRLLEYSEIDNEV 302
                 + G      +     E NV     + +MYAK G    +D+ R L+    +    
Sbjct: 552 RIHGNVEMGKVASQNLFELDPE-NVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTP 610

Query: 303 SWNSMIV 309
            W+SM V
Sbjct: 611 GWSSMEV 617


>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
 gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
          Length = 795

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 266/746 (35%), Positives = 418/746 (56%), Gaps = 11/746 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +I  Y   G    A  +F+    +N   W+SLI  ++  G   +A  LF +M L G  
Sbjct: 54  NIVIQMYLRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVS 113

Query: 131 PSQYTLDNVL-RLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           P + T  ++L +    +  L  G++ H + ++T ++ +  V+  +V+MY KC  + +A  
Sbjct: 114 PDRITFTSILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGN 173

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +F    D  N  +WT +I  Y+QNG+  + +     M   GV+ + +TF ++L AC AV 
Sbjct: 174 VFDSIQD-PNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVG 232

Query: 250 ARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE--VSWNS 306
           A +    +H   +SS G + +  V +ALI++Y KCG L+ A  +  + +IDN+  VSW+S
Sbjct: 233 ALEEAKILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGV--FVQIDNKDIVSWSS 290

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           MI  FA+ G  K A+ L   M    ++ ++ T+ +VL    S       K +H+ IV+ G
Sbjct: 291 MIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAG 350

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
           +     + +AL+ MY   G ++ A  +F   +++DV+SW+S+I G + + S   AL  F 
Sbjct: 351 YSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFR 410

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
           +M + G+ P+ V   S + ACA +  L  G Q+H      G    + V  +LV +Y KCG
Sbjct: 411 EMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCG 470

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
            + +A  VF  M  ++++TWT++ M   QNG G  +L+    M  +G KPD I FV +L 
Sbjct: 471 RLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILV 530

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           +C++AG       Y+  M + +GI P  +H  CM+D+LGR+GKL  A+ L++ M  E  +
Sbjct: 531 SCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFE-SS 589

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
             W  LL+AC+ H D     RAA  +F+LEP NA PYV LS+++  AG WE A   R+ M
Sbjct: 590 LAWMMLLTACKAHNDTARAARAAEKIFQLEPKNATPYVLLSSVFCAAGSWEAAEETRRRM 649

Query: 667 KSRGIRKEPGCSWVETNSQVHIFI--SEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMN- 723
             RG+++  G S +E   +VH F+  S+   H L  +I++ ++++   ++ AGYVPD   
Sbjct: 650 DGRGVQRLLGRSSIEIGDRVHEFVAASDVLPHHLVGEIFAALEKLGREMQGAGYVPDATA 709

Query: 724 FALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVY 783
             L +VEE GKE  + YHSE LA+  G+++ P G P+RI KNLR+C DCH A K++S + 
Sbjct: 710 VRLRDVEEGGKENAVPYHSEMLALGLGIISTPAGTPLRITKNLRMCSDCHIATKFVSKLV 769

Query: 784 LRHIILRDSNRFHHFKAGNCSCGDYW 809
            R I +RD  R HHF+ G CSCGDYW
Sbjct: 770 HRRISVRDGRRHHHFENGVCSCGDYW 795



 Score =  218 bits (556), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 229/460 (49%), Gaps = 4/460 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D    N ++  Y   G + +A  +F+     N F+W+ +I  Y+  G  +E   L  +M 
Sbjct: 151 DRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMN 210

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI-KTCFDLNAFVVTGLVDMYAKCKCI 184
             G +P  YT   VL  C+  G L+  +  H   I  T  D +A V T L+++Y KC  +
Sbjct: 211 QAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRDAAVGTALINLYGKCGAL 270

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            EA  +F    D K+ V+W++MI  ++Q+G    AI+    M +EGV  N  TF ++L A
Sbjct: 271 EEAFGVFVQI-DNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEA 329

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
             ++ A  +G ++H  I+ +G+  +V + SAL+ MY   G +++AR + E S   + VSW
Sbjct: 330 VTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSW 389

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           +SMI G+++      ALSLF++M    ++ +  T+ S ++  A    L     +H  +  
Sbjct: 390 SSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRC 449

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            G +    V  AL+++Y K G L+ A  VF  M+ K++++WTS+      +G    +LK 
Sbjct: 450 LGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKL 509

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYA 483
              M + G+ PD +V  +IL +C     +  G   + +  +  G + ++     +V +  
Sbjct: 510 LHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILG 569

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGC-AQNGKGKEA 522
           + G +  A ++ ++M     + W  L+  C A N   + A
Sbjct: 570 RAGKLEAAEQLINTMKFESSLAWMMLLTACKAHNDTARAA 609



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 135/492 (27%), Positives = 234/492 (47%), Gaps = 51/492 (10%)

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN-----VYVQSALIDMY 280
           M    +++      +ILTAC+ + A   G +VHG ++      +       +++ +I MY
Sbjct: 1   MEAREIQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMY 60

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
            +CG  D A  + +  +  N V+W S+I  F   G   +A+ LF+KM    +  D  T+ 
Sbjct: 61  LRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFT 120

Query: 341 SVLNCFAS-NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
           S+L  ++    +L+  K VHS I++TG+EG + V N +++MY K G+++ A  VF+ +QD
Sbjct: 121 SILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQD 180

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
            +V SWT +I   A +G   E L+  S M  +G+ PD    +++L AC  +  LE  + +
Sbjct: 181 PNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKIL 240

Query: 460 HAVFLKSGGCS-SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK 518
           HA  + S G     +V  +L+ +Y KCG + +A  VF  +  +D+++W+++I   AQ+G+
Sbjct: 241 HAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQ 300

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACS-----------HA---------------- 551
            K A+Q    M   G +P+ +TFV +L A +           HA                
Sbjct: 301 AKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSA 360

Query: 552 --------GLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV-- 601
                   G  E AR  FES  +   +      ++ MI    ++     A +L  +M   
Sbjct: 361 LVKMYCNWGWVETARSIFESSRERDVVS-----WSSMIAGYSQNESPARALSLFREMEVD 415

Query: 602 -GEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPY-VQLSNMYSTAGKWEDA 659
             +P++  + + + AC   G L  G +    +  L     +P    L N+Y   G+ E+A
Sbjct: 416 GVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEA 475

Query: 660 ARVRKLMKSRGI 671
             V   MK + +
Sbjct: 476 EAVFLGMKKKNL 487



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 176/363 (48%), Gaps = 6/363 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           DRD      +I  Y   G L EA  +F +   K+  +WSS+I  ++  G    A +L   
Sbjct: 251 DRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLML 310

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M LEG RP+  T  NVL   +     Q G++ H   ++  +  +  + + LV MY     
Sbjct: 311 MDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGW 370

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +  A  +F+   + ++ V+W++MI GYSQN    +A+  FR+M V+GV+ N  TF S + 
Sbjct: 371 VETARSIFESSRE-RDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAID 429

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           ACA V A   G Q+H  +   G + +V V +AL+++Y KCG L+ A  +    +  N ++
Sbjct: 430 ACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLT 489

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           W S+ + + + G    +L L   M  + +K D   + ++L   + N     +K +H   +
Sbjct: 490 WTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAIL--VSCNYAGQMSKGLHYYNL 547

Query: 364 KT---GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
            T   G          ++D+  + G L+ A  + N M+ +  ++W  L+T C  H     
Sbjct: 548 MTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLAWMMLLTACKAHNDTAR 607

Query: 421 ALK 423
           A +
Sbjct: 608 AAR 610


>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
          Length = 1408

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 265/799 (33%), Positives = 428/799 (53%), Gaps = 61/799 (7%)

Query: 71   NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE-AFELFWQMQLEGY 129
              +I++Y   G    A  +F     +N+  W+S +  + +    +    E+F ++  +G 
Sbjct: 611  KNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGV 670

Query: 130  RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
                      L+ C+    +  G + HG  IK  FDL+ ++   L++ Y +C  + +A  
Sbjct: 671  VFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQ 730

Query: 190  LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
            +F   P+ +  + W   I    Q+    K +E FR M+   +++   T   +L AC  + 
Sbjct: 731  VFHEMPNPE-ALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMG 789

Query: 250  ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
            A +   Q+HG +   G +++V + + LI MY+K G L+ ARR+ +  E  N  SWNSMI 
Sbjct: 790  ALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMIS 849

Query: 310  GFARQGFHKEALSLFKKMHARDIKIDDFTY------------------------------ 339
             +A  GF  +A SLF ++ + D+K D  T+                              
Sbjct: 850  SYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKP 909

Query: 340  -----PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVF 394
                  SVL   +    LN  K  H  +++ GF+   +V  +LIDMY K  +L  A  VF
Sbjct: 910  NSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVF 969

Query: 395  NLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVV--------------- 439
            + M+++++ +W SL++G ++ G +E+AL+  + M   GI PD V                
Sbjct: 970  DNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCAR 1029

Query: 440  ---------VSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
                     ++ +L ACA L++L+ G+++H + +++G    + V  +L+ +Y+K   + +
Sbjct: 1030 KAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKN 1089

Query: 491  ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
            A++VF  +  + + +W  +IMG A  G GKEA+  +++M   G  PD ITF  LL AC +
Sbjct: 1090 AHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKN 1149

Query: 551  AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
            +GL      YF+SM   Y I P  +HY CM+DLLGR+G L EA  L+  M  +PDAT+W 
Sbjct: 1150 SGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWG 1209

Query: 611  ALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRG 670
            ALL +CR+H +L   E AA NLF+LEP N+  Y+ + N+YS   +WED   +R+LM + G
Sbjct: 1210 ALLGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAG 1269

Query: 671  IRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVE 730
            +R     SW++ N +VH+F S+++ HP    IY ++ +++  +K+ GYVPD+N    N++
Sbjct: 1270 VRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMD 1329

Query: 731  EEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILR 790
            E  K+  L  H+EKLA+ +GL+ +  G PIR+ KN R+C DCH+A KYIS V  R + LR
Sbjct: 1330 EVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLR 1389

Query: 791  DSNRFHHFKAGNCSCGDYW 809
            D  RFHHF+ G CSC D+W
Sbjct: 1390 DGVRFHHFREGKCSCNDFW 1408



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 206/405 (50%), Gaps = 41/405 (10%)

Query: 46   FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF----KNFFTW 101
            +S +G+++ A ++F+ M +R+  +WN+MI++YA  G L +A  LF E        +  TW
Sbjct: 820  YSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTW 879

Query: 102  SSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIK 161
            + L+ G+  +G   E   +  +MQ EG++P+  ++ +VL+  S  G L  G++ HGY ++
Sbjct: 880  NCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLR 939

Query: 162  TCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIE 221
              FD + +V T L+DMY K   +  A+ +F    + +N  AW ++++GYS  G    A+ 
Sbjct: 940  NGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKN-RNIFAWNSLVSGYSFKGMFEDALR 998

Query: 222  CFRDMRVEGVESNQFTF------------------PS------ILTACAAVSARDFGAQV 257
                M  EG++ +  T+                  P+      +L ACA++S    G ++
Sbjct: 999  LLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEI 1058

Query: 258  HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
            H   + +GF  +V+V +ALIDMY+K   L +A ++    +     SWN MI+GFA  G  
Sbjct: 1059 HCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLG 1118

Query: 318  KEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNN- 375
            KEA+S+F +M    +  D  T+ ++L+ C  S +     K   S+I       Y+ V   
Sbjct: 1119 KEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMIT-----DYRIVPRL 1173

Query: 376  ----ALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYH 415
                 ++D+  + G LD A+ + + M  K D   W +L+  C  H
Sbjct: 1174 EHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIH 1218



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 132/520 (25%), Positives = 234/520 (45%), Gaps = 64/520 (12%)

Query: 56   GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWS-SLIYGYSNYGLD 114
            G L ++  D D +    ++  Y     L +A ++F+E P      W+ ++I    +  L 
Sbjct: 698  GCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQ 757

Query: 115  IEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
             +  ELF +MQ    +    T+  VL+ C   G L   +Q HGY  +   D +  +   L
Sbjct: 758  -KGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPL 816

Query: 175  VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ---------------------- 212
            + MY+K   +  A  +F    + +N  +W +MI+ Y+                       
Sbjct: 817  ISMYSKNGKLELARRVFDSM-ENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPD 875

Query: 213  -------------NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG 259
                         +GY  + +   + M+ EG + N  +  S+L A + +   + G + HG
Sbjct: 876  IVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHG 935

Query: 260  CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKE 319
             +L +GF+ +VYV ++LIDMY K   L SA+ + +  +  N  +WNS++ G++ +G  ++
Sbjct: 936  YVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFED 995

Query: 320  ALSLFKKMHARDIKIDDFTYPSVLNCF------------------------ASNIDLNNA 355
            AL L  +M    IK D  T+  +++ +                        AS   L   
Sbjct: 996  ALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKG 1055

Query: 356  KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
            K +H L ++ GF    FV  ALIDMY+K  +L  A  VF  +Q+K + SW  +I G A  
Sbjct: 1056 KEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIF 1115

Query: 416  GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG-QQVHAVFLKSGGCSSLSV 474
            G  +EA+  F++M+  G+ PD +  +++LSAC    ++  G +   ++         L  
Sbjct: 1116 GLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEH 1175

Query: 475  DNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
               +V +  + G +++A  +  +M  + D   W AL+  C
Sbjct: 1176 YCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSC 1215


>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
          Length = 702

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 263/698 (37%), Positives = 401/698 (57%), Gaps = 16/698 (2%)

Query: 128 GYRPSQYTLDNVLR----LCSLKGLLQRGEQFHGYAIKTCF--DLNAFVVTGLVDMYAKC 181
           G+  + +TL +VLR    L +    ++ G + H +A+K         F    L+ MYA+ 
Sbjct: 5   GHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARL 64

Query: 182 KCIFEAEYLFKMFPDGKNHV-AWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
             + +A+ LF     G+  V  W TM++   Q+G   +A++   DM   GV  +  TF S
Sbjct: 65  GLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFAS 124

Query: 241 ILTACAAVSARDFGAQVHGCILSSG-FEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
            L AC+ +   D G ++H  ++      AN +V SAL+DMYA    +  AR++ +     
Sbjct: 125 ALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDS 184

Query: 300 NEV--SWNSMIVGFARQGFHKEALSLFKKMHARDIKID-DFTYPSVLNCFASNIDLNNAK 356
            +    WN+MI G+A+ G  +EAL LF +M A    +  + T  SVL   A +      +
Sbjct: 185 GKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKE 244

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
           +VH  +VK G  G +FV NAL+DMYA+ G  D A  +F ++   DV+SW +LITGC   G
Sbjct: 245 AVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQG 304

Query: 417 SYEEALKYFSDMRI---SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
              +A +   +M+     G+ P+ + + ++L  CA L     G+++H   ++    + ++
Sbjct: 305 HVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVA 364

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
           V ++LV +YAKCGC+  +  VFD +  R+ ITW  LIM    +G G EA   +D+M A G
Sbjct: 365 VGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASG 424

Query: 534 -TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIE 592
             +P+ +TF+  L ACSH+G+ +     F +M++ +G++P PD  AC++D+LGR+G+L E
Sbjct: 425 EARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDE 484

Query: 593 AKALLDQM-VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYS 651
           A A++  M  GE   + W  +L ACR+H ++ LGE A   L ELEP  A  YV L N+YS
Sbjct: 485 AYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYS 544

Query: 652 TAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIML 711
            AG+W  AA VR  M+ RG+ KEPGCSW+E +  +H F++ +  HP   ++++ ++ +  
Sbjct: 545 AAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWG 604

Query: 712 LIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGD 771
            +   GY PD +  LH++++  K   L  HSEKLA+AFGLL    GA IR+ KNLRVC D
Sbjct: 605 EMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCND 664

Query: 772 CHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           CH A K++S +  R I+LRD  RFHHF+ G CSCGDYW
Sbjct: 665 CHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 702



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 142/458 (31%), Positives = 225/458 (49%), Gaps = 12/458 (2%)

Query: 68  FTWNTMIAAYANSGRLREAKKLF-NETPFK-NFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           F +N +++ YA  G + +A++LF   TP + +  TW++++      G+  EA +  + M 
Sbjct: 52  FAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMV 111

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIK-TCFDLNAFVVTGLVDMYAKCKCI 184
             G RP   T  + L  CS   LL  G + H Y IK      N+FV + LVDMYA  + +
Sbjct: 112 ALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQV 171

Query: 185 FEAEYLFKMFPD-GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE-GVESNQFTFPSIL 242
            +A  +F M PD GK    W  MI GY+Q G   +A+  F  M  E G    + T  S+L
Sbjct: 172 GKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVL 231

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
            ACA   A      VHG ++  G   N +VQ+AL+DMYA+ G  D ARR+    ++ + V
Sbjct: 232 PACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVV 291

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARD---IKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           SWN++I G   QG   +A  L ++M   +   +  +  T  ++L   A        K +H
Sbjct: 292 SWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIH 351

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
              V+   +    V +AL+DMYAK G L  +  VF+ +  ++ I+W  LI     HG   
Sbjct: 352 GYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGG 411

Query: 420 EALKYFSDMRISGIC-PDHVVVSSILSACAELTVLEFGQQV-HAVFLKSGGCSSLSVDNS 477
           EA   F  M  SG   P+ V   + L+AC+   +++ G Q+ HA+    G   +  +   
Sbjct: 412 EATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILAC 471

Query: 478 LVLVYAKCGCINDANRVFDSMHT--RDVITWTALIMGC 513
           +V +  + G +++A  +  SM    + V  W+ ++  C
Sbjct: 472 VVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGAC 509



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 3/147 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D    + ++  YA  G L  ++ +F+  P +N  TW+ LI  Y  +GL  EA  LF +
Sbjct: 360 DTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDR 419

Query: 124 MQLEG-YRPSQYTLDNVLRLCSLKGLLQRGEQ-FHGYAIKTCFDLNAFVVTGLVDMYAKC 181
           M   G  RP++ T    L  CS  G++ RG Q FH        +    ++  +VD+  + 
Sbjct: 420 MTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRA 479

Query: 182 KCIFEAEYLFKMFPDGKNHV-AWTTMI 207
             + EA  +      G+  V AW+TM+
Sbjct: 480 GRLDEAYAMVTSMEAGEQQVSAWSTML 506


>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Cucumis sativus]
          Length = 746

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 271/736 (36%), Positives = 411/736 (55%), Gaps = 11/736 (1%)

Query: 81  GRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVL 140
           G  R A KLF++    N  T++SLI GY       +   LF + +  G +  +Y     L
Sbjct: 15  GDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAGAL 74

Query: 141 RLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNH 200
             CS  G L  G+  HG  +         +   L+DMY+KC  +  A  LF    D  + 
Sbjct: 75  TACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFD-HSDKLDG 133

Query: 201 VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV--SARDFGAQVH 258
           V+W ++I GY QNG   + +   + M   G+  N +T  S L AC++     + FG  +H
Sbjct: 134 VSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLH 193

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
              +  G   +V V +AL+DMYAK G LD A ++ +     N V +N+M+ G  +Q   +
Sbjct: 194 DHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIE 253

Query: 319 E-----ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
           +     AL+LF +M +  IK   FTY S+L       D   AK VH+L+ K G    +++
Sbjct: 254 DKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYI 313

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
            + LID+Y+  G++  A + FN + +  ++  T++I G   +G +E AL  F ++     
Sbjct: 314 GSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEE 373

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
            PD  + S+I+S+CA + +L  G+Q+     K G        NS + +YAK G +  AN 
Sbjct: 374 KPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANL 433

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGL 553
            F  M   D+++W+ +I   AQ+G   EAL+F++ M + G +P++  F+G+L ACSH GL
Sbjct: 434 TFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGL 493

Query: 554 AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
            E    YF++M+K Y +K    H  C++DLLGR+G+L +A++L+ ++  E +  +W+ALL
Sbjct: 494 VEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALL 553

Query: 614 SACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRK 673
           SACR+H D    +R A  + ELEP+ +  YV L N+Y  AG    A++VR LM+ R I+K
Sbjct: 554 SACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVRTLMEERRIKK 613

Query: 674 EPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEG 733
           EPG SW++   +V+ F+S DR H     IY+K+DE++   K      D+    + +E E 
Sbjct: 614 EPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKRLDSAKDI--LGYKIEHE- 670

Query: 734 KEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSN 793
               + YHSEKLAVAFG+L L + AP+R+ KNLR+C DCH  MK  S V  R +I+RDS 
Sbjct: 671 HLTNVNYHSEKLAVAFGVLYLSESAPVRVMKNLRICLDCHMTMKLFSIVEKRELIVRDSV 730

Query: 794 RFHHFKAGNCSCGDYW 809
           RFHHFK G+CSCGDYW
Sbjct: 731 RFHHFKDGSCSCGDYW 746



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 139/463 (30%), Positives = 229/463 (49%), Gaps = 32/463 (6%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N++I  Y+  G++  A+ LF+ +   +  +W+SLI GY   G   E   +  +M   G  
Sbjct: 106 NSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLA 165

Query: 131 PSQYTLDNVLRLCS--LKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
            + YTL + L+ CS    G    G   H +AIK    L+  V T L+DMYAK   + +A 
Sbjct: 166 FNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAI 225

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQ-----NGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
            +F    D KN V +  M+ G  Q     +   +KA+  F +M+  G++ + FT+ S+L 
Sbjct: 226 QIFDQMVD-KNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLK 284

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE-- 301
           AC  V    F  QVH  +  +G  ++ Y+ S LID+Y+  G +  A  LL ++ I N   
Sbjct: 285 ACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDA--LLCFNSIHNLTI 342

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           V   +MI G+ + G  + ALSLF ++   + K D+F + ++++  A+   L + + +   
Sbjct: 343 VPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGH 402

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
             K G   +    N+ I MYAK G+L  A + F  M++ D++SW+++I   A HG   EA
Sbjct: 403 ATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEA 462

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           L++F  M+  GI P+H     +L AC+   ++E G +            ++  D  + L 
Sbjct: 463 LRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYF---------DTMEKDYKMKLH 513

Query: 482 YAKCGCIND----ANRVFD--SMHTR-----DVITWTALIMGC 513
              C C+ D    A R+ D  S+  R     + + W AL+  C
Sbjct: 514 VKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSAC 556



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 138/274 (50%), Gaps = 7/274 (2%)

Query: 282 KCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPS 341
           KCGD  SA +L +     N V++NS+I G+ +     + + LF K     +K+D +    
Sbjct: 13  KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72

Query: 342 VLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
            L   + + +L+  K +H LI+  G      + N+LIDMY+K G +D A ++F+     D
Sbjct: 73  ALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLD 132

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE--LTVLEFGQQV 459
            +SW SLI G   +G YEE L     M  +G+  +   + S L AC+        FG  +
Sbjct: 133 GVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTML 192

Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK- 518
           H   +K G    + V  +L+ +YAK G ++DA ++FD M  ++V+ + A++ G  Q    
Sbjct: 193 HDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETI 252

Query: 519 ----GKEALQFYDQMLARGTKPDYITFVGLLFAC 548
                 +AL  + +M + G KP   T+  LL AC
Sbjct: 253 EDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKAC 286



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 138/300 (46%), Gaps = 16/300 (5%)

Query: 383 KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
           K G+   A  +F+ M   +++++ SLI+G     + ++ +  F   R  G+  D    + 
Sbjct: 13  KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
            L+AC++   L  G+ +H + L  G  S + + NSL+ +Y+KCG ++ A  +FD     D
Sbjct: 73  ALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLD 132

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
            ++W +LI G  QNGK +E L    +M   G   +  T    L ACS      N    F 
Sbjct: 133 GVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNF---NGCKMFG 189

Query: 563 SMDKVYGIKPGPDHY-----ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACR 617
           +M   + IK G  H        ++D+  ++G L +A  + DQMV + +  ++ A+++   
Sbjct: 190 TMLHDHAIKLGL-HLDVVVGTALLDMYAKTGSLDDAIQIFDQMV-DKNVVMYNAMMAGLL 247

Query: 618 VHGDLE--LGERAANNLFELEPMNAMP----YVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
               +E     +A N  FE++     P    Y  L         ++ A +V  LM   G+
Sbjct: 248 QQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGL 307



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 115/246 (46%), Gaps = 5/246 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +  + +I  Y+  G + +A   FN          +++I+GY   G    A  LF+++ 
Sbjct: 310 DEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELL 369

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
               +P ++    ++  C+  G+L+ GEQ  G+A K             + MYAK   ++
Sbjct: 370 TYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLY 429

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A   F+   +  + V+W+TMI   +Q+G+  +A+  F  M+  G+E N F F  +L AC
Sbjct: 430 AANLTFQQM-ENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIAC 488

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQS--ALIDMYAKCGDLDSARRLLEYSEIDNE-V 302
           +     + G +     +   ++  ++V+    ++D+  + G L  A  L+     ++E V
Sbjct: 489 SHRGLVEEGLRYFD-TMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPV 547

Query: 303 SWNSMI 308
            W +++
Sbjct: 548 MWRALL 553


>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 263/737 (35%), Positives = 412/737 (55%), Gaps = 4/737 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +++ +   G L +A  +F     +N F+W+ L+ GY+  GL  EA +L+ +M   G +
Sbjct: 145 NALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVK 204

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  YT   VLR C     L RG + H + I+  F+ +  VV  L+ MY KC  +  A  +
Sbjct: 205 PDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLV 264

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P+ ++ ++W  MI+GY +NG   + +  F  M    V+ +  T  S++TAC  +  
Sbjct: 265 FDKMPN-RDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGD 323

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              G Q+HG +L + F  +  + ++LI MY+  G ++ A  +   +E  + VSW +MI G
Sbjct: 324 DRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISG 383

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           +      ++AL  +K M A  I  D+ T   VL+  +   +L+   ++H +  + G   Y
Sbjct: 384 YENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSY 443

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
             V N+LIDMYAK   +D A  +F+   +K+++SWTS+I G   +    EAL +F +M I
Sbjct: 444 SIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREM-I 502

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
             + P+ V +  +LSACA +  L  G+++HA  L++G      + N+++ +Y +CG +  
Sbjct: 503 RRLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEY 562

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           A + F S+   +V +W  L+ G A+ GKG  A + + +M+     P+ +TF+ +L ACS 
Sbjct: 563 AWKQFFSV-DHEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSR 621

Query: 551 AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
           +G+      YF SM   Y I P   HYAC++DLLGRSGKL EA   + +M  +PD  VW 
Sbjct: 622 SGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWG 681

Query: 611 ALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRG 670
           ALL++CR+H  +ELGE AA N+F+ +  +   Y+ LSN+Y+  GKW+  A VRK+M+  G
Sbjct: 682 ALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEVRKMMRQNG 741

Query: 671 IRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVE 730
           +  +PGCSWVE    VH F+S D  HP   +I + ++     +KEAG V     +  ++ 
Sbjct: 742 LIVDPGCSWVEVKGTVHAFLSSDNFHPQIKEINALLERFYKKMKEAG-VEGPESSHMDIM 800

Query: 731 EEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILR 790
           E  K      HSE+LA+ FGL+    G PI + KNL +C  CH  +K+IS    R I +R
Sbjct: 801 EASKADIFCGHSERLAIVFGLINSGPGMPIWVTKNLYMCQSCHNIVKFISREVRREISVR 860

Query: 791 DSNRFHHFKAGNCSCGD 807
           D+ +FHHFK G CSC D
Sbjct: 861 DAEQFHHFKGGICSCTD 877



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 141/496 (28%), Positives = 229/496 (46%), Gaps = 37/496 (7%)

Query: 21  GPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           G   + H +    +   D+  AL+  +   G+++ A  +F+KM +RD  +WN MI+ Y  
Sbjct: 226 GREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGY-- 283

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
                          F+N              G+ +E   LF  M      P   T+ +V
Sbjct: 284 ---------------FEN--------------GVCLEGLRLFGMMIKYPVDPDLMTMTSV 314

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKN 199
           +  C L G  + G Q HGY ++T F  +  +   L+ MY+    I EAE +F    + ++
Sbjct: 315 ITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSR-TECRD 373

Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG 259
            V+WT MI+GY       KA+E ++ M  EG+  ++ T   +L+AC+ +   D G  +H 
Sbjct: 374 LVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHE 433

Query: 260 CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKE 319
                G  +   V ++LIDMYAKC  +D A  +   +   N VSW S+I+G        E
Sbjct: 434 VAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFE 493

Query: 320 ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALID 379
           AL  F++M  R +K +  T   VL+  A    L   K +H+  ++TG     F+ NA++D
Sbjct: 494 ALFFFREM-IRRLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILD 552

Query: 380 MYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVV 439
           MY + G ++ A+  F    D +V SW  L+TG A  G    A + F  M  S + P+ V 
Sbjct: 553 MYVRCGRMEYAWKQF-FSVDHEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVT 611

Query: 440 VSSILSACAELTVLEFG-QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
             SIL AC+   ++  G +  +++  K     +L     +V +  + G + +A      M
Sbjct: 612 FISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKM 671

Query: 499 HTR-DVITWTALIMGC 513
             + D   W AL+  C
Sbjct: 672 PMKPDPAVWGALLNSC 687



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 178/330 (53%), Gaps = 3/330 (0%)

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           ++   ++R+  VE + +   +++  C    AR  G++V+  +  S    ++ + +AL+ M
Sbjct: 94  LDSMHELRIP-VEDDAYV--ALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNALLSM 150

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           + + G+L  A  +    E  N  SWN ++ G+A+ G   EAL L+ +M    +K D +T+
Sbjct: 151 FVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTF 210

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
           P VL       +L   + +H  +++ GFE    V NALI MY K G+++ A +VF+ M +
Sbjct: 211 PCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPN 270

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           +D ISW ++I+G   +G   E L+ F  M    + PD + ++S+++AC  L     G+Q+
Sbjct: 271 RDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQI 330

Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKG 519
           H   L++      S+ NSL+ +Y+  G I +A  VF     RD+++WTA+I G       
Sbjct: 331 HGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMP 390

Query: 520 KEALQFYDQMLARGTKPDYITFVGLLFACS 549
           ++AL+ Y  M A G  PD IT   +L ACS
Sbjct: 391 QKALETYKMMEAEGIMPDEITIAIVLSACS 420



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 185/358 (51%), Gaps = 7/358 (1%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           RD    N++I  Y++ G + EA+ +F+ T  ++  +W+++I GY N  +  +A E +  M
Sbjct: 341 RDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMM 400

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
           + EG  P + T+  VL  CS    L  G   H  A +      + V   L+DMYAKCKCI
Sbjct: 401 EAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCI 460

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            +A  +F    + KN V+WT++I G   N   F+A+  FR+M +  ++ N  T   +L+A
Sbjct: 461 DKALEIFHSTLE-KNIVSWTSIILGLRINNRCFEALFFFREM-IRRLKPNSVTLVCVLSA 518

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV-S 303
           CA + A   G ++H   L +G   + ++ +A++DMY +CG ++ A +  ++  +D+EV S
Sbjct: 519 CARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWK--QFFSVDHEVTS 576

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLI 362
           WN ++ G+A +G    A  LF++M   ++  ++ T+ S+L  C  S +     +  +S+ 
Sbjct: 577 WNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMK 636

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGSYE 419
            K            ++D+  + G L+ A+     M  K D   W +L+  C  H   E
Sbjct: 637 YKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRIHHHVE 694



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 119/248 (47%)

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           NS I      G    A+S    MH   I ++D  Y +++              V+S +  
Sbjct: 75  NSHIYQLCLLGNLDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSI 134

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
           +       + NAL+ M+ + GNL  A+ VF  M+ +++ SW  L+ G A  G ++EAL  
Sbjct: 135 SMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDL 194

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           +  M   G+ PD      +L  C  +  L  G+++H   ++ G  S + V N+L+ +Y K
Sbjct: 195 YHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVK 254

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG +N A  VFD M  RD I+W A+I G  +NG   E L+ +  M+     PD +T   +
Sbjct: 255 CGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSV 314

Query: 545 LFACSHAG 552
           + AC   G
Sbjct: 315 ITACELLG 322


>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 251/622 (40%), Positives = 372/622 (59%), Gaps = 2/622 (0%)

Query: 190 LFKMFP-DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE-GVESNQFTFPSILTACAA 247
           LF++ P   ++  ++  +I  + + G+   A+  F +M  +  V  +Q T  + + +C+ 
Sbjct: 124 LFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSR 183

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           +     G  V       GF  + +V ++LI MYA CGD+ +A  L    ++   ++WN+M
Sbjct: 184 MCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAM 243

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I G+ + G  KE + +FK M       D+ T  SV        D N  + +     + G 
Sbjct: 244 IAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGM 303

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
              + +  AL+DMYAK G LD A  +F+ M  +DV++W+++I+G        EAL  F++
Sbjct: 304 LRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNE 363

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           M+ + + P+ V + S+LSACA L  LE G+ VH+   +     ++ +  +LV  YAKCGC
Sbjct: 364 MQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGC 423

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           I DA + F+SM  R+  TWTALI G A NG+ +EAL+ +  ML    +P  +TF+G+L A
Sbjct: 424 IKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLA 483

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
           CSH  L E  R +F SM + YGI P  +HY CM+DLLGR+G + EA   +  M  EP+A 
Sbjct: 484 CSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAV 543

Query: 608 VWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
           VW+ALLSAC VH ++E+GE A   +  L+P ++  Y+ LSN Y++ G+W++AA VRK MK
Sbjct: 544 VWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMK 603

Query: 668 SRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALH 727
            +G+ K PGCS +E    +  F +ED  HP  T+IY K+ E++  IK  GY+P+   A  
Sbjct: 604 EKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPNTADARL 663

Query: 728 NVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHI 787
           +V+E  K++ +++HSEKLA+AFGL+    GA IR+ KNLRVC DCH+A K IS VY R I
Sbjct: 664 DVDEYEKQVSVSHHSEKLAIAFGLMKSRPGATIRLSKNLRVCIDCHSATKLISKVYNREI 723

Query: 788 ILRDSNRFHHFKAGNCSCGDYW 809
           I+RD NRFHHFK G CSC DYW
Sbjct: 724 IVRDRNRFHHFKDGLCSCNDYW 745



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 137/454 (30%), Positives = 220/454 (48%), Gaps = 9/454 (1%)

Query: 79  NSGRLREAKKLFN--ETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYT 135
           +S  L  A +LF     P ++  +++ LI  +   G   +A  LF +M  +    P Q+T
Sbjct: 114 SSAHLSYAIRLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHT 173

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
           + N ++ CS    L  G     YA K  F ++ FV+  L+ MYA C  +  A  LF    
Sbjct: 174 VANTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTV- 232

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGA 255
             K  +AW  MI GY +NG   + +E F+ M       ++ T  S+ TAC  +   + G 
Sbjct: 233 QVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQ 292

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
            +       G   +  + +AL+DMYAKCG+LD ARRL +     + V+W++MI G+ +  
Sbjct: 293 WIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSD 352

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
             +EAL++F +M   ++  +D T  SVL+  A    L   K VHS I +        +  
Sbjct: 353 RCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGT 412

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
           AL+D YAK G +  A   F  M  ++  +WT+LI G A +G   EAL+ FS M  + I P
Sbjct: 413 ALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEP 472

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGG-CSSLSVDNSLVLVYAKCGCINDANRV 494
             V    +L AC+   ++E G++      +  G C  +     +V +  + G I++A + 
Sbjct: 473 TDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQF 532

Query: 495 FDSMHTR-DVITWTALIMGCAQNGK---GKEALQ 524
             +M    + + W AL+  C  +     G+EAL+
Sbjct: 533 IRNMPIEPNAVVWRALLSACTVHKNVEIGEEALK 566



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 188/403 (46%), Gaps = 14/403 (3%)

Query: 27  HNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREA 86
           H V N+VK  S +     D S    +      F++    D F  N++I  YA+ G +  A
Sbjct: 172 HTVANTVKSCSRM----CDLSVGRGVQ--AYAFKRGFMVDQFVLNSLIHMYASCGDVVAA 225

Query: 87  KKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRP-SQYTLDNVLRLCSL 145
             LF+    K    W+++I GY   G   E  E+F  M LE   P  + TL +V   C  
Sbjct: 226 HVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGM-LEVRAPFDEVTLLSVATACGR 284

Query: 146 KGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTT 205
            G    G+    YA +     +  + T LVDMYAKC  + +A  LF      ++ VAW+ 
Sbjct: 285 LGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRM-HSRDVVAWSA 343

Query: 206 MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
           MI+GY+Q+    +A+  F +M+   V  N  T  S+L+ACA + A + G  VH  I    
Sbjct: 344 MISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKD 403

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
               V + +AL+D YAKCG +  A +  E   + N  +W ++I G A  G  +EAL LF 
Sbjct: 404 LPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFS 463

Query: 326 KMHARDIKIDDFTYPSV-LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
            M   +I+  D T+  V L C    +     +   S+    G          ++D+  + 
Sbjct: 464 SMLEANIEPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRA 523

Query: 385 GNLDCAFM-VFNLMQDKDVISWTSLITGCAYHGSY---EEALK 423
           G +D A+  + N+  + + + W +L++ C  H +    EEALK
Sbjct: 524 GLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNVEIGEEALK 566


>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
 gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
          Length = 696

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 264/701 (37%), Positives = 411/701 (58%), Gaps = 20/701 (2%)

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+  G    ++ + +++  C+    L+ G + H + I T F  +  + T L+ MYAKC  
Sbjct: 1   MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A+ +F+   + K+  AW+++I+ Y++ G G  A+  +R M  EGVE N  TF   L 
Sbjct: 61  LDDAKRVFEGM-EIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALG 119

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
            CA+V+    G  +H  IL+S    +  +Q +L++MY KC ++  AR++ E  +  N  S
Sbjct: 120 GCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRS 179

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           + +MI  + + G H EAL LF +M   + I+ + +T+ ++L       +L   + VH  +
Sbjct: 180 YTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHL 239

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
              GF+    V NAL+ MY K G+   A  VF+ M  ++VISWTS+I   A HG+ +EAL
Sbjct: 240 ASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEAL 299

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
             F  M +    P  V  SS L+ACA L  L+ G+++H   +++   +S  ++ SL+ +Y
Sbjct: 300 NLFKRMDVE---PSGVSFSSALNACALLGALDEGREIHHRVVEAH-LASPQMETSLLSMY 355

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
           A+CG ++DA RVF+ M TRD  +  A+I    Q+G+ K+AL+ Y +M   G   D ITFV
Sbjct: 356 ARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFV 415

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
            +L ACSH  L  + R +F+S+   +G+ P  +HY CM+D+LGRSG+L +A+ L++ M  
Sbjct: 416 SVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPY 475

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
           + DA  W  LLS C+ HGDL  GERAA  +FEL P   +PYV LSNMY+ A +++DA RV
Sbjct: 476 QTDAVAWMTLLSGCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRV 535

Query: 663 RKLMKSRGIRKEPGCSWVETNSQVHIFISEDR-----GHPLRT--DIYSKIDEIMLLIKE 715
           RK M+ RG+      S++E ++++H+F S  R     GH  RT   + S + E++  +K+
Sbjct: 536 RKEMEERGVTTPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLLELLEPMKQ 595

Query: 716 AGYVPDMNFAL----HNVEEEGKEIGLAYHSEKLAVAFGLLTLP---QGAPIRIFKNLRV 768
           AGYVPD             EE K+  L +HSE+LA+A+GL+         P+R+  + RV
Sbjct: 596 AGYVPDTREVYLEQQGGTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDSRPLRVVNSHRV 655

Query: 769 CGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           C DCH+A+K +S +  + I +RD NRFHHF+ G CSCGD+W
Sbjct: 656 CSDCHSAIKLLSDIIEKTIFVRDGNRFHHFEKGACSCGDHW 696



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 143/473 (30%), Positives = 239/473 (50%), Gaps = 13/473 (2%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
             ++  YA  G L +AK++F     K+ F WSS+I  Y+  G    A  L+ +M  EG  
Sbjct: 49  TALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVE 108

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+  T    L  C+    L  G   H   + +    +  +   L++MY KC  + EA  +
Sbjct: 109 PNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKV 168

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILTACAAVS 249
           F+     +N  ++T MI+ Y Q G   +A+E F  M +VE +E N +TF +IL A   + 
Sbjct: 169 FEGM-KARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLG 227

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
             + G +VH  + S GF+ NV VQ+AL+ MY KCG    AR++ +     N +SW SMI 
Sbjct: 228 NLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIA 287

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
            +A+ G  +EAL+LFK+M   D++    ++ S LN  A    L+  + +H  +V+     
Sbjct: 288 AYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLAS 344

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
            + +  +L+ MYA+ G+LD A  VFN M+ +D  S  ++I     HG  ++AL+ +  M 
Sbjct: 345 PQ-METSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRME 403

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL--VYAKCGC 487
             GI  D +   S+L AC+  +++   +      +   G   L V++ L +  V  + G 
Sbjct: 404 QEGIPADGITFVSVLVACSHTSLVADCRDFFQSLVMDHGVVPL-VEHYLCMVDVLGRSGR 462

Query: 488 INDANRVFDSM-HTRDVITWTALIMGCAQNG---KGKEALQFYDQMLARGTKP 536
           + DA  + ++M +  D + W  L+ GC ++G   +G+ A +   ++    T P
Sbjct: 463 LGDAEELVETMPYQTDAVAWMTLLSGCKRHGDLNRGERAARKVFELAPAETLP 515



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/181 (22%), Positives = 71/181 (39%), Gaps = 54/181 (29%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++  G +D+A ++F +M  RD F+ N MIAA+   GR ++A +++               
Sbjct: 355 YARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYR-------------- 400

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                            +M+ EG      T  +VL  CS           H   +  C D
Sbjct: 401 -----------------RMEQEGIPADGITFVSVLVACS-----------HTSLVADCRD 432

Query: 166 LNAFVVTG------------LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQN 213
               +V              +VD+  +   + +AE L +  P   + VAW T+++G  ++
Sbjct: 433 FFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCKRH 492

Query: 214 G 214
           G
Sbjct: 493 G 493


>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  487 bits (1254), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 268/763 (35%), Positives = 416/763 (54%), Gaps = 10/763 (1%)

Query: 53  DEAGQLFEKMSDRDGFT----WNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY 108
           DE  +++E +S           N +++ +   G L +A  +F +   ++ F+W+ L+ GY
Sbjct: 114 DEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGY 173

Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA 168
           +  G   EA  L+ +M     RP+ YT  +VL+ C+    + RG++ H + I+  F+ + 
Sbjct: 174 AKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDV 233

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
            V   L+ MY KC  I  A  LF   P  ++ ++W  MI+GY +NG G + +E F  MR 
Sbjct: 234 DVGNALITMYVKCGDISNARMLFDKMPK-RDRISWNAMISGYFENGGGLEGLELFSMMRE 292

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
             V+ +  T  ++ +AC  +     G  VHG ++ S F  ++ + ++LI MY+  G L+ 
Sbjct: 293 LSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEE 352

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
           A  +    E  + VSW +MI          +A+  +K M    I  D+ T  SVL+  A 
Sbjct: 353 AETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACAC 412

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
              L+    +H + +KTG   +  V+N+LIDMY+K   +D A  VF  +  K+V+SWTSL
Sbjct: 413 IGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSL 472

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
           I G   +    EAL +F  M+ S + P+ V + S+LSACA +  L  G+++HA  L++G 
Sbjct: 473 ILGLRINNRSFEALLFFRQMKES-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGV 531

Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
                + N+++ +Y +CG    A   F+S   +DV  W  L+ G AQ G+ K A++ +D+
Sbjct: 532 GFDGFLPNAILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDK 590

Query: 529 MLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSG 588
           ML     PD ITF+ LL ACS +G+      YF  M   Y + P   HYAC++D+LGR+G
Sbjct: 591 MLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAG 650

Query: 589 KLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSN 648
           +L +A   +  M   PDA +W ALL+ACR+H ++ELGE AA  +FE +  +   Y+ L N
Sbjct: 651 QLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCN 710

Query: 649 MYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDE 708
           +Y+  G W+  ++VR LM+ RG+  +PGCSWVE   +VH F+S D  H    +I   +D 
Sbjct: 711 LYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDG 770

Query: 709 IMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRV 768
               +KE G+    +     +E    +I    HSE+ A+AFGL+    G PI + KNL +
Sbjct: 771 FCSKMKENGFGNLKSSFTSEIESSRADI-FCGHSERQAIAFGLINTAPGMPIWVXKNLYM 829

Query: 769 CGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGD--YW 809
           C  CH  +K+IS +  R I +RD   +HHFK G CSCGD  YW
Sbjct: 830 CHSCHNMVKFISTIVRREISVRDVEEYHHFKDGVCSCGDEGYW 872



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 146/496 (29%), Positives = 230/496 (46%), Gaps = 37/496 (7%)

Query: 21  GPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           G   + H +    +   D+  AL+  +   G+I  A  LF+KM  RD  +WN MI+ Y  
Sbjct: 217 GKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGY-- 274

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
                          F+N              G  +E  ELF  M+     P   T+  V
Sbjct: 275 ---------------FEN--------------GGGLEGLELFSMMRELSVDPDLITMTTV 305

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKN 199
              C L    + G   HGY +K+ F  +  +   L+ MY+    + EAE +F    + K+
Sbjct: 306 ASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRM-ESKD 364

Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG 259
            V+WT MI     +   FKA+E ++ M +EG+  ++ T  S+L+ACA +   D G ++H 
Sbjct: 365 VVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHE 424

Query: 260 CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKE 319
             + +G  ++V V ++LIDMY+KC  +D+A  +       N VSW S+I+G        E
Sbjct: 425 IAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFE 484

Query: 320 ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALID 379
           AL  F++M    +K +  T  SVL+  A    L   K +H+  ++TG     F+ NA++D
Sbjct: 485 ALLFFRQM-KESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILD 543

Query: 380 MYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVV 439
           MY + G    A   FN  Q KDV +W  L+TG A  G  + A++ F  M    I PD + 
Sbjct: 544 MYVRCGRKVPALNQFN-SQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEIT 602

Query: 440 VSSILSACAELTVLEFGQQVHAVFL-KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
             S+L AC++  ++  G +   +   K     +L     +V +  + G ++DA      M
Sbjct: 603 FISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDM 662

Query: 499 HTR-DVITWTALIMGC 513
             R D   W AL+  C
Sbjct: 663 PIRPDAAIWGALLNAC 678



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 192/398 (48%), Gaps = 65/398 (16%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           +N +L+  +S+ G ++EA  +F +M  +D  +W  MIA+  +           ++ PFK 
Sbjct: 336 MNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVS-----------HKLPFK- 383

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                              A E +  M+LEG  P + TL +VL  C+  G L  G + H 
Sbjct: 384 -------------------AVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHE 424

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
            AIKT    +  V   L+DMY+KCKC+  A  +F+    GKN V+WT++I G   N   F
Sbjct: 425 IAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNI-SGKNVVSWTSLILGLRINNRSF 483

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           +A+  FR M+ E ++ N  T  S+L+ACA + A   G ++H   L +G   + ++ +A++
Sbjct: 484 EALLFFRQMK-ESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAIL 542

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
           DMY +CG    A      S+  +  +WN ++ G+A+QG  K A+ LF KM   +I  D+ 
Sbjct: 543 DMYVRCGRKVPALNQFN-SQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEI 601

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN------------ALIDMYAKQG 385
           T+ S+L C  S           S +V  G E +  + N             ++D+  + G
Sbjct: 602 TFISLL-CACSK----------SGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAG 650

Query: 386 NLDCAFMVFNLMQD----KDVISWTSLITGCAYHGSYE 419
            LD A   ++ +QD     D   W +L+  C  H + E
Sbjct: 651 QLDDA---YDFIQDMPIRPDAAIWGALLNACRIHRNVE 685



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 132/295 (44%), Gaps = 10/295 (3%)

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
            G+ E+A+K    M    I  +     ++L  C      + G +V+ +   S  C  + +
Sbjct: 75  QGNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRL 134

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
            N+L+ ++ + G + DA  VF  M  RDV +W  L+ G A+ G   EAL  Y +ML    
Sbjct: 135 GNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEI 194

Query: 535 KPDYITFVGLLFACSHAGLAENARWY-FESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
           +P+  TF  +L  C  AG+++ AR     +    +G +   D    +I +  + G +  A
Sbjct: 195 RPNVYTFPSVLKTC--AGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNA 252

Query: 594 KALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFE-LEPMNAMPYVQLSNMYST 652
           + L D+M  + D   W A++S    +G    G      LF  +  ++  P +      ++
Sbjct: 253 RMLFDKM-PKRDRISWNAMISGYFENG----GGLEGLELFSMMRELSVDPDLITMTTVAS 307

Query: 653 AGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKID 707
           A +  D  R+ + +    ++ E G      NS + ++ S  R     T ++S+++
Sbjct: 308 ACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAET-VFSRME 361


>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 268/763 (35%), Positives = 416/763 (54%), Gaps = 10/763 (1%)

Query: 53  DEAGQLFEKMSDRDGFT----WNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY 108
           DE  +++E +S           N +++ +   G L +A  +F +   ++ F+W+ L+ GY
Sbjct: 114 DEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGY 173

Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA 168
           +  G   EA  L+ +M     RP+ YT  +VL+ C+    + RG++ H + I+  F+ + 
Sbjct: 174 AKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDV 233

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
            V   L+ MY KC  I  A  LF   P  ++ ++W  MI+GY +NG G + +E F  MR 
Sbjct: 234 DVGNALITMYVKCGDISNARMLFDKMPK-RDRISWNAMISGYFENGGGLEGLELFSMMRE 292

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
             V+ +  T  ++ +AC  +     G  VHG ++ S F  ++ + ++LI MY+  G L+ 
Sbjct: 293 LSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEE 352

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
           A  +    E  + VSW +MI          +A+  +K M    I  D+ T  SVL+  A 
Sbjct: 353 AETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACAC 412

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
              L+    +H + +KTG   +  V+N+LIDMY+K   +D A  VF  +  K+V+SWTSL
Sbjct: 413 IGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSL 472

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
           I G   +    EAL +F  M+ S + P+ V + S+LSACA +  L  G+++HA  L++G 
Sbjct: 473 ILGLRINNRSFEALLFFRQMKES-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGV 531

Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
                + N+++ +Y +CG    A   F+S   +DV  W  L+ G AQ G+ K A++ +D+
Sbjct: 532 GFDGFLPNAILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDK 590

Query: 529 MLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSG 588
           ML     PD ITF+ LL ACS +G+      YF  M   Y + P   HYAC++D+LGR+G
Sbjct: 591 MLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAG 650

Query: 589 KLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSN 648
           +L +A   +  M   PDA +W ALL+ACR+H ++ELGE AA  +FE +  +   Y+ L N
Sbjct: 651 QLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCN 710

Query: 649 MYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDE 708
           +Y+  G W+  ++VR LM+ RG+  +PGCSWVE   +VH F+S D  H    +I   +D 
Sbjct: 711 LYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDG 770

Query: 709 IMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRV 768
               +KE G+    +     +E    +I    HSE+ A+AFGL+    G PI + KNL +
Sbjct: 771 FCSKMKENGFGNLKSSFTSEIESSRADI-FCGHSERQAIAFGLINTAPGMPIWVTKNLYM 829

Query: 769 CGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGD--YW 809
           C  CH  +K+IS +  R I +RD   +HHFK G CSCGD  YW
Sbjct: 830 CHSCHNMVKFISTIVRREISVRDVEEYHHFKDGVCSCGDEGYW 872



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 146/496 (29%), Positives = 230/496 (46%), Gaps = 37/496 (7%)

Query: 21  GPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           G   + H +    +   D+  AL+  +   G+I  A  LF+KM  RD  +WN MI+ Y  
Sbjct: 217 GKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGY-- 274

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
                          F+N              G  +E  ELF  M+     P   T+  V
Sbjct: 275 ---------------FEN--------------GGGLEGLELFSMMRELSVDPDLITMTTV 305

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKN 199
              C L    + G   HGY +K+ F  +  +   L+ MY+    + EAE +F    + K+
Sbjct: 306 ASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRM-ESKD 364

Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG 259
            V+WT MI     +   FKA+E ++ M +EG+  ++ T  S+L+ACA +   D G ++H 
Sbjct: 365 VVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHE 424

Query: 260 CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKE 319
             + +G  ++V V ++LIDMY+KC  +D+A  +       N VSW S+I+G        E
Sbjct: 425 IAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFE 484

Query: 320 ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALID 379
           AL  F++M    +K +  T  SVL+  A    L   K +H+  ++TG     F+ NA++D
Sbjct: 485 ALLFFRQM-KESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILD 543

Query: 380 MYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVV 439
           MY + G    A   FN  Q KDV +W  L+TG A  G  + A++ F  M    I PD + 
Sbjct: 544 MYVRCGRKVPALNQFN-SQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEIT 602

Query: 440 VSSILSACAELTVLEFGQQVHAVFL-KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
             S+L AC++  ++  G +   +   K     +L     +V +  + G ++DA      M
Sbjct: 603 FISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDM 662

Query: 499 HTR-DVITWTALIMGC 513
             R D   W AL+  C
Sbjct: 663 PIRPDAAIWGALLNAC 678



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 192/398 (48%), Gaps = 65/398 (16%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           +N +L+  +S+ G ++EA  +F +M  +D  +W  MIA+  +           ++ PFK 
Sbjct: 336 MNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVS-----------HKLPFK- 383

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                              A E +  M+LEG  P + TL +VL  C+  G L  G + H 
Sbjct: 384 -------------------AVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHE 424

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
            AIKT    +  V   L+DMY+KCKC+  A  +F+    GKN V+WT++I G   N   F
Sbjct: 425 IAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNI-SGKNVVSWTSLILGLRINNRSF 483

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           +A+  FR M+ E ++ N  T  S+L+ACA + A   G ++H   L +G   + ++ +A++
Sbjct: 484 EALLFFRQMK-ESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAIL 542

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
           DMY +CG    A      S+  +  +WN ++ G+A+QG  K A+ LF KM   +I  D+ 
Sbjct: 543 DMYVRCGRKVPALNQFN-SQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEI 601

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN------------ALIDMYAKQG 385
           T+ S+L C  S           S +V  G E +  + N             ++D+  + G
Sbjct: 602 TFISLL-CACSK----------SGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAG 650

Query: 386 NLDCAFMVFNLMQD----KDVISWTSLITGCAYHGSYE 419
            LD A   ++ +QD     D   W +L+  C  H + E
Sbjct: 651 QLDDA---YDFIQDMPIRPDAAIWGALLNACRIHRNVE 685



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 132/295 (44%), Gaps = 10/295 (3%)

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
            G+ E+A+K    M    I  +     ++L  C      + G +V+ +   S  C  + +
Sbjct: 75  QGNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRL 134

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
            N+L+ ++ + G + DA  VF  M  RDV +W  L+ G A+ G   EAL  Y +ML    
Sbjct: 135 GNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEI 194

Query: 535 KPDYITFVGLLFACSHAGLAENARWY-FESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
           +P+  TF  +L  C  AG+++ AR     +    +G +   D    +I +  + G +  A
Sbjct: 195 RPNVYTFPSVLKTC--AGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNA 252

Query: 594 KALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFE-LEPMNAMPYVQLSNMYST 652
           + L D+M  + D   W A++S    +G    G      LF  +  ++  P +      ++
Sbjct: 253 RMLFDKM-PKRDRISWNAMISGYFENG----GGLEGLELFSMMRELSVDPDLITMTTVAS 307

Query: 653 AGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKID 707
           A +  D  R+ + +    ++ E G      NS + ++ S  R     T ++S+++
Sbjct: 308 ACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAET-VFSRME 361


>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Brachypodium distachyon]
          Length = 646

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 248/626 (39%), Positives = 361/626 (57%), Gaps = 18/626 (2%)

Query: 202 AWTTMITGYSQNGYGFKAIECFRDMRVE----GVESNQFTFPSILTACAAVSARDFGAQV 257
           +W   I   +  G    AI  F  MR         S   + P  L +CAA+  R  GA +
Sbjct: 21  SWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASL 80

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGD--------------LDSARRLLEYSEIDNEVS 303
           H   L SG  A+ +  +AL+++Y K                 L+S R++ +     + VS
Sbjct: 81  HALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVS 140

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN++++G A  G H EAL L ++M     K D FT  SVL  FA   D+     +H    
Sbjct: 141 WNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFAT 200

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           + GF    FV ++LIDMYA     D +  VF+ +  +D I W S++ GCA +GS +EAL 
Sbjct: 201 RNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALG 260

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            F  M  SGI P  V  SS++ AC  L  L  G+Q+HA  ++ G   ++ + +SL+ +Y 
Sbjct: 261 LFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYC 320

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG ++ A R+FD + + D+++WTA+IMG A +G  +EAL  +D+M     KP++ITF+ 
Sbjct: 321 KCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLA 380

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           +L ACSHAGL +    YF SM   YGI P  +H+A + D LGR GKL EA   +  M  +
Sbjct: 381 VLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIK 440

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
           P A+VW  LL AC+VH +  L E  A  +F+LEP +   ++ LSN YS++G+W +AA +R
Sbjct: 441 PTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEAAHLR 500

Query: 664 KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMN 723
           K M+ +G++KEP CSW+E  ++ H+F++ D+ HP    I   ++     +   GYVP+ +
Sbjct: 501 KSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDALNVFSEQMVRQGYVPNTD 560

Query: 724 FALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVY 783
               ++EEE K   L  HSEKLA+ FG+++ P G  IR+ KNLRVC DCHT  K+IS + 
Sbjct: 561 DVFQDIEEEQKNSVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHTVTKFISKIV 620

Query: 784 LRHIILRDSNRFHHFKAGNCSCGDYW 809
            R I++RD+NRFHHFK G CSCGD+W
Sbjct: 621 GREIVMRDANRFHHFKDGICSCGDFW 646



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 199/371 (53%), Gaps = 11/371 (2%)

Query: 83  LREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRL 142
           L   +K+F+E P K+  +W++L+ G +  G   EA  L  +M  +G +P  +TL +VL +
Sbjct: 123 LESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPI 182

Query: 143 CSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD--GKNH 200
            +    ++RG + HG+A +  F  + FV + L+DMYA C      +Y  K+F +   ++ 
Sbjct: 183 FAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCT---RTDYSVKVFDNLPVRDA 239

Query: 201 VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
           + W +M+ G +QNG   +A+  FR M   G++    TF S++ AC  +++   G Q+H  
Sbjct: 240 ILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAY 299

Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEA 320
           ++  GF+ NV++ S+LIDMY KCG++  ARR+ +  +  + VSW +MI+G A  G  +EA
Sbjct: 300 VIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREA 359

Query: 321 LSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALID 379
           L LF +M   ++K +  T+ +VL  C  + +     K  +S+    G       + AL D
Sbjct: 360 LVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALAD 419

Query: 380 MYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSY---EEALKYFSDMRISGICP 435
              + G L+ A+   + M+ K   S W++L+  C  H +    EE  K   D+    +  
Sbjct: 420 TLGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMG- 478

Query: 436 DHVVVSSILSA 446
            H+++S+  S+
Sbjct: 479 SHIILSNTYSS 489



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 216/434 (49%), Gaps = 21/434 (4%)

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS----QYTLDNVLRLCSLKGLLQRGEQF 155
           +W+  I   ++ G    A  LF +M+      +      +L   L+ C+  GL   G   
Sbjct: 21  SWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASL 80

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKC-------------IFEA-EYLFKMFPDGKNHV 201
           H  A+++    + F    L+++Y K                + E+   +F   P+ K+ V
Sbjct: 81  HALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPE-KDVV 139

Query: 202 AWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI 261
           +W T++ G +++G   +A+   R+M  +G + + FT  S+L   A  +    G ++HG  
Sbjct: 140 SWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFA 199

Query: 262 LSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEAL 321
             +GF  +V+V S+LIDMYA C   D + ++ +   + + + WNSM+ G A+ G   EAL
Sbjct: 200 TRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEAL 259

Query: 322 SLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMY 381
            LF++M    IK    T+ S++    +   L   K +H+ +++ GF+G  F++++LIDMY
Sbjct: 260 GLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMY 319

Query: 382 AKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVS 441
            K GN+  A  +F+ +Q  D++SWT++I G A HG   EAL  F  M +  + P+H+   
Sbjct: 320 CKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFL 379

Query: 442 SILSACAELTVLEFG-QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT 500
           ++L+AC+   +++ G +  +++    G   SL    +L     + G + +A      M  
Sbjct: 380 AVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKI 439

Query: 501 RDVIT-WTALIMGC 513
           +   + W+ L+  C
Sbjct: 440 KPTASVWSTLLRAC 453



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 120/245 (48%), Gaps = 3/245 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  +++I  YAN  R   + K+F+  P ++   W+S++ G +  G   EA  LF +M 
Sbjct: 207 DVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRML 266

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G +P   T  +++  C     L  G+Q H Y I+  FD N F+ + L+DMY KC  + 
Sbjct: 267 HSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVS 326

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A  +F       + V+WT MI G++ +G   +A+  F  M +  ++ N  TF ++LTAC
Sbjct: 327 IARRIFDRI-QSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTAC 385

Query: 246 AAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS- 303
           +     D G +    +    G   ++   +AL D   + G L+ A   +   +I    S 
Sbjct: 386 SHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIKPTASV 445

Query: 304 WNSMI 308
           W++++
Sbjct: 446 WSTLL 450



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 51/92 (55%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D + F  +++I  Y   G +  A+++F+     +  +W+++I G++ +G   EA  LF +
Sbjct: 306 DGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDR 365

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
           M+L   +P+  T   VL  CS  GL+ +G ++
Sbjct: 366 MELGNLKPNHITFLAVLTACSHAGLVDKGWKY 397


>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 248/663 (37%), Positives = 386/663 (58%), Gaps = 1/663 (0%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
            D F  +++I  YA +G L +A+ LF+  P K+   W+ ++ GY   G    A ++F +M
Sbjct: 91  EDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEM 150

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
           +    +P+  T   VL +C+ + +L  G Q HG A+    +L++ V   L+ MY+KC+C+
Sbjct: 151 RHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCL 210

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
             A  LF   P   + V+W  +I+GY QNG   +A   FR M   G++ +  TF S L  
Sbjct: 211 QAARKLFDTLPQ-SDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPC 269

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
              + +     ++HG I+      +V+++SALID+Y KC D++ A++ L  S   + V  
Sbjct: 270 VNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVC 329

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
            +MI G+   G +KEAL  F+ +    +K    T+ S+   FA    LN  K +H  I+K
Sbjct: 330 TTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIK 389

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
           T  +    V +A++DMYAK G LD A  VFN + +KD I W S+IT C+ +G   EA+  
Sbjct: 390 TKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINL 449

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           F  M + G   D V +S  LSACA L  L +G+++H + +K    S L  ++SL+ +YAK
Sbjct: 450 FRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAK 509

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG +N + RVFD M  ++ ++W ++I     +G  KE L  + +ML  G +PD++TF+G+
Sbjct: 510 CGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGI 569

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           + AC HAG  +    Y+  M + YGI    +HYAC+ D+ GR+G+L EA   ++ M   P
Sbjct: 570 ISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFPP 629

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
           DA VW  LL AC +HG++EL E A+ +LF+L+P+N+  YV L+N+ + AGKW    +VR 
Sbjct: 630 DAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRS 689

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
           +MK RG+RK PG SW+E N+  H+F++ D  HPL   IYS +D ++L +K+ GYVP +  
Sbjct: 690 IMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKEGYVPQLYL 749

Query: 725 ALH 727
            +H
Sbjct: 750 PMH 752



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 172/554 (31%), Positives = 281/554 (50%), Gaps = 17/554 (3%)

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
           Y  +G L++AK LF          W+ +I G++  G    A   + +M   G  P +YT 
Sbjct: 2   YVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTF 61

Query: 137 DNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD 196
             V++ C     ++ G+  H          + FV + L+ +YA+   + +A+YLF   P 
Sbjct: 62  PYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQ 121

Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
            K+ V W  M+ GY +NG    AI+ F +MR   ++ N  TF  +L+ CA+ +  D G Q
Sbjct: 122 -KDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           +HG  +  G E +  V + L+ MY+KC  L +AR+L +     + VSWN +I G+ + G 
Sbjct: 181 LHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGL 240

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
             EA  LF+ M +  IK D  T+ S L C    + L + K +H  I++       F+ +A
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSA 300

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDK--DVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           LID+Y K  +++ A    NL Q    D +  T++I+G   +G  +EAL+ F  +    + 
Sbjct: 301 LIDIYFKCRDVEMAQK--NLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMK 358

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           P  V  SSI  A A L  L  G+++H   +K+       V ++++ +YAKCG ++ A RV
Sbjct: 359 PTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRV 418

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
           F+ +  +D I W ++I  C+QNG+  EA+  + QM   GT+ D ++  G L AC++    
Sbjct: 419 FNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPAL 478

Query: 555 ENARWYFESMDKVYGIKPGP---DHYA--CMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
              +     M K      GP   D YA   +ID+  + G L  ++ + D+M  E +   W
Sbjct: 479 HYGKEIHGLMIK------GPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRM-QEKNEVSW 531

Query: 610 KALLSACRVHGDLE 623
            +++SA   HGDL+
Sbjct: 532 NSIISAYGNHGDLK 545



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 226/473 (47%), Gaps = 19/473 (4%)

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           MY +   + +A+ LF     G    AW  MI G++  G    A+  +  M   GV  +++
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTS-AWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKY 59

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           TFP ++ AC  + +   G  VH  +   G + +V+V S+LI +YA+ G L  A+ L +  
Sbjct: 60  TFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              + V WN M+ G+ + G    A+ +F +M   +IK +  T+  VL+  AS   L+   
Sbjct: 120 PQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H + V  G E    V N L+ MY+K   L  A  +F+ +   D++SW  +I+G   +G
Sbjct: 180 QLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNG 239

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
              EA   F  M  +GI PD +  +S L    EL  L+  +++H   ++      + + +
Sbjct: 240 LMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKS 299

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           +L+ +Y KC  +  A +      + D +  T +I G   NGK KEAL+ +  ++    KP
Sbjct: 300 ALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKP 359

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPGPDHY----ACMIDLLGRSGKL 590
             +TF  +  A   AGLA           +++G  IK   D      + ++D+  + G+L
Sbjct: 360 TSVTFSSIFPA--FAGLAA-----LNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRL 412

Query: 591 IEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPY 643
             A  + ++ + E DA  W +++++C  +G    GE  A NLF    M    Y
Sbjct: 413 DLACRVFNR-ITEKDAICWNSMITSCSQNG--RPGE--AINLFRQMGMEGTRY 460



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 110/235 (46%), Gaps = 2/235 (0%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G + +   D      + ++  YA  GRL  A ++FN    K+   W+S+I   S  G   
Sbjct: 385 GSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPG 444

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  LF QM +EG R    ++   L  C+    L  G++ HG  IK     + +  + L+
Sbjct: 445 EAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLI 504

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMYAKC  +  +  +F    + KN V+W ++I+ Y  +G   + +  F +M   G++ + 
Sbjct: 505 DMYAKCGNLNFSRRVFDRMQE-KNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDH 563

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSA 289
            TF  I++AC      D G + +  +    G  A +   + + DM+ + G L  A
Sbjct: 564 VTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEA 618



 Score = 43.5 bits (101), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 40/59 (67%), Gaps = 3/59 (5%)

Query: 37  SDL--NRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE 92
           SDL    +L+D ++  G ++ + ++F++M +++  +WN++I+AY N G L+E   LF+E
Sbjct: 495 SDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHE 553


>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
          Length = 697

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 251/662 (37%), Positives = 396/662 (59%), Gaps = 2/662 (0%)

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
           L+  +Q H   I +    N F+   L++ Y  C  + +A+ +F   P  KN V+WT +I+
Sbjct: 37  LKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTP-CKNVVSWTILIS 95

Query: 209 GYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEA 268
           G ++N    +AI+ FR+M +   + N  T  S+L A A +        VH   +  GFE 
Sbjct: 96  GLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEG 155

Query: 269 NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH 328
           NV+V++AL+DMY+K G +  AR+L E     N VSWN+++ G++  GF +EA+ LF  M 
Sbjct: 156 NVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMR 215

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD 388
            + + +D +T  S++    S   L     +H  I++TG+E  K +  AL+D+Y     +D
Sbjct: 216 RKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVD 275

Query: 389 CAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR-ISGICPDHVVVSSILSAC 447
            A  VF+ M  KDV +WT ++TG +    ++ A+K+F+ M  I  +  D +V+  ILS+C
Sbjct: 276 DAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSC 335

Query: 448 AELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWT 507
           +    L+ G++VHA+ +K+   +++ V ++++ +YA CG + DA R F  M  +DV+ W 
Sbjct: 336 SHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWN 395

Query: 508 ALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKV 567
           A+I G   NG G +A+  + QM   G  PD  TFV +L+ACSHAG+       F  M K 
Sbjct: 396 AMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKT 455

Query: 568 YGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGER 627
               P   HYAC+ID+LGR+G+L  A + ++ M  +PD  V+  LL ACR+HG+++LG  
Sbjct: 456 SHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHE 515

Query: 628 AANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVH 687
            +  +FE+EP +A  YV LSNMY+ AG WE     R  ++S+ ++K+PG S +E N +++
Sbjct: 516 ISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGFSSIEINQEIY 575

Query: 688 IFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAV 747
            F++ ++ HP    I   +  ++L IK+AGYVP+ N  L +V ++ K+  L +HSEK+A+
Sbjct: 576 TFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAI 635

Query: 748 AFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGD 807
           AFGL+    G  IRI KNLR C DCH+A K++S V+ R ++++D+NRFH F+ G CSC D
Sbjct: 636 AFGLMRTKPGTIIRITKNLRTCNDCHSASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRD 695

Query: 808 YW 809
           YW
Sbjct: 696 YW 697



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 141/483 (29%), Positives = 254/483 (52%), Gaps = 6/483 (1%)

Query: 41  RALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           R L D     +I    Q+       + F  N+++ AY   G L +AK++F+ TP KN  +
Sbjct: 32  RKLKDLKPLQQIH--AQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVS 89

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
           W+ LI G +     +EA ++F +M +  ++P+  T+ +VL   +  GL++  +  H + +
Sbjct: 90  WTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWV 149

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAI 220
           +  F+ N FV T LVDMY+K  C+  A  LF+   + +N V+W  +++GYS +G+  +AI
Sbjct: 150 RGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSE-RNVVSWNAIVSGYSDHGFSEEAI 208

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
           + F  MR +G+  + +T  S++ A  +V     G  +HG I+ +G+E + ++++AL+D+Y
Sbjct: 209 DLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIY 268

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA-RDIKIDDFTY 339
                +D A R+     + +  +W  M+ GF+       A+  F KM   +++K+D    
Sbjct: 269 VSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVL 328

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
             +L+  + +  L   + VH+L +KT F    FV +A+IDMYA  GNL+ A   F  M +
Sbjct: 329 MGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGE 388

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           KDV+ W ++I G   +G   +A+  F  M+ SG+ PD     S+L AC+   ++  G Q+
Sbjct: 389 KDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQI 448

Query: 460 HAVFLK-SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNG 517
               +K S    +L     ++ +  + G ++ A    ++M  + D   ++ L+  C  +G
Sbjct: 449 FYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHG 508

Query: 518 KGK 520
             K
Sbjct: 509 NIK 511



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 171/354 (48%), Gaps = 51/354 (14%)

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           DL   + +H+ I+ +G     F++N+L++ Y   G L  A  +F+    K+V+SWT LI+
Sbjct: 36  DLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILIS 95

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
           G A +  + EA+  F +M +    P+ V +SS+L A A L ++   + VH  +++ G   
Sbjct: 96  GLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEG 155

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
           ++ V+ +LV +Y+K GC+  A ++F+SM  R+V++W A++ G + +G  +EA+  ++ M 
Sbjct: 156 NVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMR 215

Query: 531 ARGTKPDYITFVGLLFA-----CSHAGLAENA---RWYFES--------MD--------- 565
            +G   D+ T + L+ A     C   G   +    R  +E+        MD         
Sbjct: 216 RKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVD 275

Query: 566 ---KVYGIKPGPDHYACMIDLLGRSGKLIEAKAL--LDQMVG----EPDATVWKALLSAC 616
              +V+      D  A  + L G S      +A+   ++M+G    + D+ V   +LS+C
Sbjct: 276 DAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSC 335

Query: 617 RVHGDLELGERA---------ANNLFELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
              G L+ G R          ANN+F            + +MY+  G  EDA R
Sbjct: 336 SHSGALQQGRRVHALAIKTCFANNIFVGSA--------VIDMYANCGNLEDAKR 381


>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 750

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 278/776 (35%), Positives = 418/776 (53%), Gaps = 68/776 (8%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
            +A+     +G  D A  +F+ M  R+  ++N MI+ Y  + +   A+ LF++ P K+ F
Sbjct: 37  TKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLF 96

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL--KGLLQRGEQFHG 157
           +                     W + L GY  ++   D  +   S+  K ++       G
Sbjct: 97  S---------------------WNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSG 135

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
           Y           V +G VD         EA  +F   P  KN ++W  ++  Y ++G   
Sbjct: 136 Y-----------VRSGHVD---------EARDVFDRMPH-KNSISWNGLLAAYVRSGRLE 174

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           +A   F       + S        +       AR    Q+    L S         + +I
Sbjct: 175 EARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLIS--------WNTMI 226

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
             YA+ GDL  ARRL E S + +  +W +M+  + + G   EA  +F +M  +     + 
Sbjct: 227 SGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKR----EM 282

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN----NALIDMYAKQGNLDCAFMV 393
           +Y  ++  +A    ++  + +        FE   F N    N +I  Y + G+L  A  +
Sbjct: 283 SYNVMIAGYAQYKRMDMGREL--------FEEMPFPNIGSWNIMISGYCQNGDLAQARNL 334

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           F++M  +D +SW ++I G A +G YEEA+    +M+  G   +       LSACA++  L
Sbjct: 335 FDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAAL 394

Query: 454 EFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC 513
           E G+QVH   +++G      V N+LV +Y KCGCI++A  VF  +  +D+++W  ++ G 
Sbjct: 395 ELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGY 454

Query: 514 AQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPG 573
           A++G G++AL  ++ M+  G KPD IT VG+L ACSH GL +    YF SM+K YGI P 
Sbjct: 455 ARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPN 514

Query: 574 PDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLF 633
             HYACMIDLLGR+G L EA+ L+  M  EPDA  W ALL A R+HG++ELGE+AA  +F
Sbjct: 515 SKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVF 574

Query: 634 ELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISED 693
           ++EP N+  YV LSN+Y+ +G+W D +++R  M+  G++K PG SWVE  +++H F   D
Sbjct: 575 KMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGD 634

Query: 694 RGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLT 753
             HP +  IY+ ++E+ L +K  GYV      LH+VEEE K+  L YHSEKLAVAFG+LT
Sbjct: 635 CFHPEKGRIYAFLEELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLKYHSEKLAVAFGILT 694

Query: 754 LPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +P G PIR+ KNLRVC DCH A+K+IS +  R II+RDS+R+HHF  G CSC DYW
Sbjct: 695 MPSGKPIRVMKNLRVCEDCHNAIKHISKIVGRLIIVRDSHRYHHFSEGICSCRDYW 750



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 194/390 (49%), Gaps = 45/390 (11%)

Query: 35  PASDL---NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN 91
           P  DL   N  +  ++  G++ +A +LFE+   RD FTW  M+ AY   G L EA+++F+
Sbjct: 215 PVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFD 274

Query: 92  ETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQR 151
           E P K   +++ +I GY+ Y       ELF +M      P+  +  N++    + G  Q 
Sbjct: 275 EMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPF----PNIGSW-NIM----ISGYCQN 325

Query: 152 GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYS 211
           G+                              + +A  LF M P  ++ V+W  +I GY+
Sbjct: 326 GD------------------------------LAQARNLFDMMPQ-RDSVSWAAIIAGYA 354

Query: 212 QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVY 271
           QNG   +A+    +M+ +G   N+ TF   L+ACA ++A + G QVHG ++ +G+E    
Sbjct: 355 QNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCL 414

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD 331
           V +AL+ MY KCG +D A  + +  +  + VSWN+M+ G+AR GF ++AL++F+ M    
Sbjct: 415 VGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAG 474

Query: 332 IKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
           +K D+ T   VL+ C  + +     +  HS+    G          +ID+  + G L+ A
Sbjct: 475 VKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEA 534

Query: 391 F-MVFNLMQDKDVISWTSLITGCAYHGSYE 419
             ++ N+  + D  +W +L+     HG+ E
Sbjct: 535 QNLIRNMPFEPDAATWGALLGASRIHGNME 564


>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g24000, mitochondrial; Flags: Precursor
 gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
          Length = 633

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 242/585 (41%), Positives = 364/585 (62%), Gaps = 1/585 (0%)

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
           D+    + +++  + ++L  C        G  VH  IL S F  ++ + + L++MYAKCG
Sbjct: 50  DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109

Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
            L+ AR++ E     + V+W ++I G+++     +AL  F +M       ++FT  SV+ 
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
             A+         +H   VK GF+    V +AL+D+Y + G +D A +VF+ ++ ++ +S
Sbjct: 170 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229

Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
           W +LI G A     E+AL+ F  M   G  P H   +S+  AC+    LE G+ VHA  +
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 289

Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ 524
           KSG        N+L+ +YAK G I+DA ++FD +  RDV++W +L+   AQ+G GKEA+ 
Sbjct: 290 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVW 349

Query: 525 FYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLL 584
           ++++M   G +P+ I+F+ +L ACSH+GL +    Y+E M K  GI P   HY  ++DLL
Sbjct: 350 WFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLL 408

Query: 585 GRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYV 644
           GR+G L  A   +++M  EP A +WKALL+ACR+H + ELG  AA ++FEL+P +  P+V
Sbjct: 409 GRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHV 468

Query: 645 QLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYS 704
            L N+Y++ G+W DAARVRK MK  G++KEP CSWVE  + +H+F++ D  HP R +I  
Sbjct: 469 ILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIAR 528

Query: 705 KIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFK 764
           K +E++  IKE GYVPD +  + +V+++ +E+ L YHSEK+A+AF LL  P G+ I I K
Sbjct: 529 KWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKK 588

Query: 765 NLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           N+RVCGDCHTA+K  S V  R II+RD+NRFHHFK GNCSC DYW
Sbjct: 589 NIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 132/391 (33%), Positives = 215/391 (54%), Gaps = 4/391 (1%)

Query: 126 LEG-YRPSQYTLDN-VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           LEG Y P+     N +L+ C++  LL +G   H + +++ F  +  +   L++MYAKC  
Sbjct: 51  LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + EA  +F+  P  ++ V WTT+I+GYSQ+     A+  F  M   G   N+FT  S++ 
Sbjct: 111 LEEARKVFEKMPQ-RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           A AA      G Q+HG  +  GF++NV+V SAL+D+Y + G +D A+ + +  E  N+VS
Sbjct: 170 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN++I G AR+   ++AL LF+ M     +   F+Y S+    +S   L   K VH+ ++
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 289

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K+G +   F  N L+DMYAK G++  A  +F+ +  +DV+SW SL+T  A HG  +EA+ 
Sbjct: 290 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVW 349

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
           +F +MR  GI P+ +   S+L+AC+   +L+ G   + +  K G         ++V +  
Sbjct: 350 WFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLG 409

Query: 484 KCGCINDANRVFDSMHTRDVIT-WTALIMGC 513
           + G +N A R  + M        W AL+  C
Sbjct: 410 RAGDLNRALRFIEEMPIEPTAAIWKALLNAC 440



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 207/383 (54%), Gaps = 12/383 (3%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           NT++  YA  G L EA+K+F + P ++F TW++LI GYS +    +A   F QM   GY 
Sbjct: 99  NTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYS 158

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+++TL +V++  + +     G Q HG+ +K  FD N  V + L+D+Y +   + +A+ +
Sbjct: 159 PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLV 218

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F    + +N V+W  +I G+++     KA+E F+ M  +G   + F++ S+  AC++   
Sbjct: 219 FDAL-ESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGF 277

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            + G  VH  ++ SG +   +  + L+DMYAK G +  AR++ +     + VSWNS++  
Sbjct: 278 LEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTA 337

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF--E 368
           +A+ GF KEA+  F++M    I+ ++ ++ SVL   + +  L+     + L+ K G   E
Sbjct: 338 YAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPE 397

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEALKYFSD 427
            + +V   ++D+  + G+L+ A      M  +   + W +L+  C  H + E  L  ++ 
Sbjct: 398 AWHYVT--VVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE--LGAYAA 453

Query: 428 MRISGICPD----HVVVSSILSA 446
             +  + PD    HV++ +I ++
Sbjct: 454 EHVFELDPDDPGPHVILYNIYAS 476



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 28/217 (12%)

Query: 417 SYEEALKYFS----------DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
           S +E+LK+ S          D+  S I  D    +++L  C    +L  G+ VHA  L+S
Sbjct: 30  SEDESLKFPSNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQS 89

Query: 467 GGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFY 526
                + + N+L+ +YAKCG + +A +VF+ M  RD +TWT LI G +Q+ +  +AL F+
Sbjct: 90  IFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFF 149

Query: 527 DQMLARGTKPDYITFVGLLFA--------CSHAGLAENARWYFESMDKVYGIKPGPDHYA 578
           +QML  G  P+  T   ++ A        C H       +  F+S   V          +
Sbjct: 150 NQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV---------GS 200

Query: 579 CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
            ++DL  R G + +A+ + D +    D + W AL++ 
Sbjct: 201 ALLDLYTRYGLMDDAQLVFDALESRNDVS-WNALIAG 236



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 67/143 (46%)

Query: 67  GFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL 126
            F  NT++  YA SG + +A+K+F+    ++  +W+SL+  Y+ +G   EA   F +M+ 
Sbjct: 297 AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRR 356

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
            G RP++ +  +VL  CS  GLL  G  ++    K      A+    +VD+  +   +  
Sbjct: 357 VGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNR 416

Query: 187 AEYLFKMFPDGKNHVAWTTMITG 209
           A    +  P       W  ++  
Sbjct: 417 ALRFIEEMPIEPTAAIWKALLNA 439


>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
 gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 253/630 (40%), Positives = 376/630 (59%), Gaps = 10/630 (1%)

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           LF  + D  +  +W ++I   ++ G   +++  F  MR   ++ N+ TFP  + +C+A+ 
Sbjct: 37  LFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
             + G Q H   L  GFE++++V SALIDMY+KCG L +AR L +     N V+W S+I 
Sbjct: 97  DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLIT 156

Query: 310 GFARQGFHKEALSLFKKM---------HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
           G+ +     EAL +FK+                +D     SVL+  +   +   ++ VH 
Sbjct: 157 GYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHG 216

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
           + +K G +    V N L+D YAK G +  +  VF+ M +KDV+SW S+I   A +G   +
Sbjct: 217 VAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTD 276

Query: 421 ALKYFSDM-RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
           A + F  M +  G   + V +S++L ACA    L  G  +H   +K G  +++ +  S++
Sbjct: 277 AFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSII 336

Query: 480 LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
            +Y KCG    A   FD M  ++V +WTA+I G   +G  +EAL  + QM+  G KP+YI
Sbjct: 337 DMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYI 396

Query: 540 TFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ 599
           TF+ +L ACSHAG  E    +F +M   Y ++PG +HY CM+DLLGR+G + EA  L+  
Sbjct: 397 TFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKS 456

Query: 600 MVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDA 659
           M    D  +W +LL+ACR+H D+EL E +A  LF+L+P N   YV L+N+Y+ AG+W+D 
Sbjct: 457 MKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKDV 516

Query: 660 ARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYV 719
            R+R L+K RG+ K PG S VE   +VH+F+  D+ HP    IY  ++E+ + ++EAGYV
Sbjct: 517 ERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQEAGYV 576

Query: 720 PDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYI 779
           P+M   LH+V+EE KE+ +  HSEKLAVAFG++    G+ I + KNLRVCGDCHT +K I
Sbjct: 577 PNMASVLHDVDEEEKEMIVRVHSEKLAVAFGVMNSIPGSTIHVIKNLRVCGDCHTVIKLI 636

Query: 780 SAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           S +  R II+RD+ RFHHFK G CSCGDYW
Sbjct: 637 SKIVSREIIVRDAKRFHHFKDGLCSCGDYW 666



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 138/462 (29%), Positives = 225/462 (48%), Gaps = 32/462 (6%)

Query: 72  TMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRP 131
           +  AA  N+       K F+ T   + ++W+SLI   +  G   E+   F  M+    +P
Sbjct: 24  STTAAATNTNLTTLFNKYFDRT---DVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKP 80

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
           ++ T    ++ CS    L  G+Q H  A+   F+ + FV + L+DMY+KC  +  A  LF
Sbjct: 81  NRSTFPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLF 140

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN---------QFTFPSIL 242
              P  +N V WT++ITGY QN    +A+  F++   E  E N              S+L
Sbjct: 141 DEIPR-RNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVL 199

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           +AC+ VS +     VHG  +  G +  + V++ L+D YAKCG++  +R++ +     + V
Sbjct: 200 SACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVV 259

Query: 303 SWNSMIVGFARQGFHKEALSLFKKM-HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           SWNSMI  +A+ G   +A  +F  M  A   K ++ T  ++L   A    L     +H  
Sbjct: 260 SWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQ 319

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           ++K G+     +  ++IDMY K G  + A   F+ M++K+V SWT++I G   HG   EA
Sbjct: 320 VIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREA 379

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLE-----FGQQVHAVFLKSG----GCSSL 472
           L  F  M  +G+ P+++   S+L+AC+    LE     F    H   ++ G    GC   
Sbjct: 380 LDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGC--- 436

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHT-RDVITWTALIMGC 513
                +V +  + G I +A  +  SM   RD + W +L+  C
Sbjct: 437 -----MVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAAC 473



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 185/399 (46%), Gaps = 29/399 (7%)

Query: 42  ALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTW 101
           AL D ++  +  +   +F   SD   F  + +I  Y+  G+L  A+ LF+E P +N  TW
Sbjct: 94  ALFDLNSGKQAHQQALVFGFESDL--FVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTW 151

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLE---------GYRPSQYTLDNVLRLCSLKGLLQRG 152
           +SLI GY       EA  +F +   E         G       + +VL  CS        
Sbjct: 152 TSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVS 211

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD--GKNHVAWTTMITGY 210
           E  HG AIK   D    V   L+D YAKC    E     K+F D   K+ V+W +MI  Y
Sbjct: 212 EGVHGVAIKVGLDKVMGVENTLLDAYAKCG---EVSLSRKVFDDMAEKDVVSWNSMIAVY 268

Query: 211 SQNGYGFKAIECFRDM-RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
           +QNG    A E F  M +  G + N+ T  ++L ACA   A   G  +H  ++  G+  N
Sbjct: 269 AQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNN 328

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA 329
           V + +++IDMY KCG  + AR   +  +  N  SW +MI G+   GF +EAL +F +M  
Sbjct: 329 VIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIW 388

Query: 330 RDIKIDDFTYPSVLNCFASNIDLN------NAKSVHSLIVKTGFEGYKFVNNALIDMYAK 383
             +K +  T+ SVL   +    L       NA S H   V+ G E Y      ++D+  +
Sbjct: 389 AGVKPNYITFISVLAACSHAGFLEEGWRWFNAMS-HEYNVEPGVEHY----GCMVDLLGR 443

Query: 384 QGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEA 421
            G +  A+ +   M+  +D + W SL+  C  H   E A
Sbjct: 444 AGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELA 482



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 128/279 (45%), Gaps = 49/279 (17%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  L  ++  GE+  + ++F+ M+++D  +WN+MIA YA +                   
Sbjct: 231 NTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQN------------------- 271

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
                       GL  +AFE+F  M +  G + ++ TL  +L  C+ +G L+ G   H  
Sbjct: 272 ------------GLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQ 319

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG---KNHVAWTTMITGYSQNGY 215
            IK  +  N  + T ++DMY KC    +AE     F DG   KN  +WT MI GY  +G+
Sbjct: 320 VIKMGYVNNVIMATSIIDMYCKCG---QAEMARNAF-DGMKEKNVRSWTAMIAGYGMHGF 375

Query: 216 GFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA-----RDFGAQVHGCILSSGFEANV 270
             +A++ F  M   GV+ N  TF S+L AC+         R F A  H   +  G E   
Sbjct: 376 AREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEH-- 433

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNE-VSWNSMI 308
                ++D+  + G +  A  L++  ++  + V W S++
Sbjct: 434 --YGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLL 470


>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
 gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
          Length = 682

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 256/623 (41%), Positives = 369/623 (59%), Gaps = 2/623 (0%)

Query: 189 YLFKMFPDGK--NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           Y F++    K  N   + TMI G   N    ++IE +  MR EG+  + FTFP +L ACA
Sbjct: 60  YSFRILDQTKEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACA 119

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            V   + G ++H  ++ +G EA+ +V+ +LI++Y KCG +D+A ++ +     N  SW +
Sbjct: 120 RVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTA 179

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
            I G+   G  +EA+ +F+++    ++ D F+   VL+      DL + + +   I + G
Sbjct: 180 TISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENG 239

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
                FV  AL+D Y K GN++ A  VF+ M +K+++SW+S+I G A +G  +EAL  F 
Sbjct: 240 MVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFF 299

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
            M   G+ PD   +  +L +CA L  LE G     +   +    +  +  +L+ +YAKCG
Sbjct: 300 KMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCG 359

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
            ++ A  VF  M  +D + W A I G A +G  K+AL  + QM   G KPD  TFVGLL 
Sbjct: 360 RMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLC 419

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           AC+HAGL E  R YF SM+ V+ + P  +HY CM+DLLGR+G L EA  L+  M  E +A
Sbjct: 420 ACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANA 479

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
            VW ALL  CR+H D +L E     L  LEP ++  YV LSN+Y+ + KWE+AA++R +M
Sbjct: 480 IVWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIM 539

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFAL 726
             RG++K PG SW+E +  VH F+  D  HPL   IY+K+ E+   +K AGYVP  +  L
Sbjct: 540 SERGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYVPTTDHVL 599

Query: 727 HNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRH 786
            ++EEE KE  +  HSEKLAVAFGL++      I + KNLRVCGDCH A+K+IS +  R 
Sbjct: 600 FDIEEEEKEHFIGCHSEKLAVAFGLISTAPNDKILVVKNLRVCGDCHEAIKHISRIAGRE 659

Query: 787 IILRDSNRFHHFKAGNCSCGDYW 809
           II+RD+NRFH F  G CSC DYW
Sbjct: 660 IIVRDNNRFHCFTDGLCSCKDYW 682



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 145/460 (31%), Positives = 226/460 (49%), Gaps = 19/460 (4%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D +  N ++    N G    + ++ ++T   N F ++++I G        E+ E++  
Sbjct: 39  DEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLNDCFQESIEIYHS 98

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+ EG  P  +T   VL+ C+     + G + H   +K   + +AFV   L+++Y KC  
Sbjct: 99  MRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGF 158

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I  A  +F   PD KN  +WT  I+GY   G   +AI+ FR +   G+  + F+   +L+
Sbjct: 159 IDNAFKVFDDIPD-KNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLS 217

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC        G  +   I  +G   NV+V +AL+D Y KCG+++ AR + +     N VS
Sbjct: 218 ACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVS 277

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           W+SMI G+A  G  KEAL LF KM    +K D +    VL   A    L       +LI 
Sbjct: 278 WSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLIN 337

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
              F     +  ALIDMYAK G +D A+ VF  M+ KD + W + I+G A  G  ++AL 
Sbjct: 338 GNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALG 397

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ----VHAVF-----LKSGGCSSLSV 474
            F  M  SGI PD      +L AC    ++E G++    +  VF     ++  GC     
Sbjct: 398 LFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGC----- 452

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
              +V +  + GC+++A+++  SM    + I W AL+ GC
Sbjct: 453 ---MVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGC 489



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 208/447 (46%), Gaps = 37/447 (8%)

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
            +H  +L  G + + Y+ + ++      G+ + + R+L+ ++  N   +N+MI G     
Sbjct: 28  HIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLND 87

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
             +E++ ++  M    +  D FT+P VL   A  +D      +HSL+VK G E   FV  
Sbjct: 88  CFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKI 147

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
           +LI++Y K G +D AF VF+ + DK+  SWT+ I+G    G   EA+  F  +   G+ P
Sbjct: 148 SLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRP 207

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           D   +  +LSAC     L  G+ +     ++G   ++ V  +LV  Y KCG +  A  VF
Sbjct: 208 DSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVF 267

Query: 496 DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAE 555
           D M  +++++W+++I G A NG  KEAL  + +ML  G KPD    VG+L +C+  G  E
Sbjct: 268 DGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALE 327

Query: 556 NARWYFE-------------------------SMDKVYGIKPGPDH-----YACMIDLLG 585
              W                             MD+ + +  G        +   I  L 
Sbjct: 328 LGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLA 387

Query: 586 RSGKLIEAKALLDQMVG---EPDATVWKALLSACRVHGDLELGERAANNL---FELEPMN 639
            SG + +A  L  QM     +PD   +  LL AC   G +E G R  N++   F L P  
Sbjct: 388 MSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTP-E 446

Query: 640 AMPYVQLSNMYSTAGKWEDAARVRKLM 666
              Y  + ++   AG  ++A ++ K M
Sbjct: 447 IEHYGCMVDLLGRAGCLDEAHQLIKSM 473



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 115/361 (31%), Positives = 177/361 (49%), Gaps = 17/361 (4%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           + D F   ++I  Y   G +  A K+F++ P KNF +W++ I GY   G   EA ++F +
Sbjct: 140 EADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRR 199

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           +   G RP  ++L  VL  C   G L+ GE    Y  +     N FV T LVD Y KC  
Sbjct: 200 LLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGN 259

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +  A  +F    + KN V+W++MI GY+ NG   +A++ F  M  EG++ + +    +L 
Sbjct: 260 MERARSVFDGMLE-KNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLC 318

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           +CA + A + G      I  + F  N  + +ALIDMYAKCG +D A  +       + V 
Sbjct: 319 SCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVV 378

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL--------NNA 355
           WN+ I G A  G  K+AL LF +M    IK D  T+  +L C  ++  L        N+ 
Sbjct: 379 WNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLL-CACTHAGLVEEGRRYFNSM 437

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM-QDKDVISWTSLITGCAY 414
           + V +L  +    G       ++D+  + G LD A  +   M  + + I W +L+ GC  
Sbjct: 438 ECVFTLTPEIEHYG------CMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRL 491

Query: 415 H 415
           H
Sbjct: 492 H 492



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 171/363 (47%), Gaps = 41/363 (11%)

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
           L + K +H+ +++ G +   ++ N ++      GN + +F + +  ++ ++  + ++I G
Sbjct: 23  LKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRG 82

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
              +  ++E+++ +  MR  G+ PD      +L ACA +   E G ++H++ +K+G  + 
Sbjct: 83  LVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEAD 142

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
             V  SL+ +Y KCG I++A +VFD +  ++  +WTA I G    GK +EA+  + ++L 
Sbjct: 143 AFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLE 202

Query: 532 RGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLI 591
            G +PD  + V +L AC   G   +  W  E + +  G+         ++D  G+ G + 
Sbjct: 203 MGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITE-NGMVRNVFVATALVDFYGKCGNME 261

Query: 592 EAKALLDQMVG----------------------------------EPDATVWKALLSACR 617
            A+++ D M+                                   +PD      +L +C 
Sbjct: 262 RARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCA 321

Query: 618 VHGDLELGERAANNLFELEPM-NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPG 676
             G LELG+ A+N +   E + N++    L +MY+  G+ + A  V      RG+RK+  
Sbjct: 322 RLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEV-----FRGMRKKDR 376

Query: 677 CSW 679
             W
Sbjct: 377 VVW 379


>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
          Length = 691

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 259/690 (37%), Positives = 393/690 (56%), Gaps = 36/690 (5%)

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK--NHVAWTTMITGYSQN 213
           H   +KT      + ++ L+++           Y   +F   +  N + W TM+ G + +
Sbjct: 2   HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61

Query: 214 GYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
                 +E +  M   G   N +TFP +L +CA     + G Q+H  ++  G E + Y  
Sbjct: 62  SDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAH 121

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVS------------------------------ 303
           ++LI MYA+ G L+ AR++ + S   + VS                              
Sbjct: 122 TSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVV 181

Query: 304 -WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
            WN+MI G+     ++EAL LFK+M   +++ D+ T  SVL+  A +  +   + +H+L+
Sbjct: 182 SWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLV 241

Query: 363 V-KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
               GF     + NA I +Y+K G+++ A  +F  +  KDV+SW +LI G  +   Y+EA
Sbjct: 242 DDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEA 301

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK--SGGCSSLSVDNSLV 479
           L  F +M  SG  P+ V + S+L ACA L  ++ G+ +H    K   G  +  ++  SL+
Sbjct: 302 LLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLI 361

Query: 480 LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
            +YAKCG I  A++VF+SM  + + +W A+I G A +G+   A   + +M   G +PD I
Sbjct: 362 DMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDI 421

Query: 540 TFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ 599
           T VGLL ACSH+GL +  R  F+S+ + Y I P  +HY CMIDLLG +G   EA+ ++  
Sbjct: 422 TLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHM 481

Query: 600 MVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDA 659
           M  EPD  +W +LL AC++HG+LEL E  A  L E+EP N+  YV LSN+Y+TAG+WED 
Sbjct: 482 MPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDV 541

Query: 660 ARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYV 719
           AR+R+++  +G++K PGCS +E +S VH FI  D+ HP   +IY  ++E+ +L++EAG+V
Sbjct: 542 ARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEEAGFV 601

Query: 720 PDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYI 779
           PD +  L  +EEE KE  L +HSEKLA+AFGL++   G  + + KNLRVC +CH A K I
Sbjct: 602 PDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTVVKNLRVCRNCHEATKLI 661

Query: 780 SAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           S +Y R I+ RD  RFHHF+ G CSC DYW
Sbjct: 662 SKIYKREIVARDRTRFHHFRDGVCSCCDYW 691



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 136/511 (26%), Positives = 230/511 (45%), Gaps = 66/511 (12%)

Query: 55  AGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLD 114
           A  +FE   + +   WNTM+   A+S  L                               
Sbjct: 36  AVSVFETXQEPNLLIWNTMLRGLASSSDL------------------------------- 64

Query: 115 IEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
           +   E++ +M   G+ P+ YT   +L+ C+     + G Q H   +K   +L+ +  T L
Sbjct: 65  VSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSL 124

Query: 175 VDMYAKCKCIFEAEYLF----------------------------KMFP--DGKNHVAWT 204
           + MYA+   + +A  +F                            K+F     ++ V+W 
Sbjct: 125 ISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWN 184

Query: 205 TMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS- 263
            MITGY +N    +A+E F++M    V  ++ T  S+L+ACA   + + G ++H  +   
Sbjct: 185 AMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDH 244

Query: 264 SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSL 323
            GF +++ + +A I +Y+KCGD++ A  L E     + VSWN++I G+     +KEAL L
Sbjct: 245 HGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLL 304

Query: 324 FKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK--TGFEGYKFVNNALIDMY 381
           F++M       +D T  SVL   A    ++  + +H  I K   G      +  +LIDMY
Sbjct: 305 FQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMY 364

Query: 382 AKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVS 441
           AK G+++ A  VFN M  K + SW ++I G A HG    A   FS MR +GI PD + + 
Sbjct: 365 AKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLV 424

Query: 442 SILSACAELTVLEFGQQV-HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT 500
            +LSAC+   +L+ G+ +  +V         L     ++ +    G   +A  +   M  
Sbjct: 425 GLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPM 484

Query: 501 R-DVITWTALIMGCAQNGKGKEALQFYDQML 530
             D + W +L+  C  +G  + A  F  +++
Sbjct: 485 EPDGVIWCSLLKACKMHGNLELAESFAQKLM 515



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 134/482 (27%), Positives = 234/482 (48%), Gaps = 31/482 (6%)

Query: 16  RSKIIGPARYTHNVGNSVKPASDLNR----ALVD-FSNSGEIDEAGQLFEKMSDRDGFTW 70
           +SK     R  H     +K   +L+R    +L+  ++ +G +++A ++F+  S RD  + 
Sbjct: 95  KSKTFEEGRQIH--AQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSC 152

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY-SNYGLDIEAFELFWQMQLEGY 129
             +I  YA+ G +R A+K+F+    ++  +W+++I GY  N G + EA ELF +M     
Sbjct: 153 TALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYE-EALELFKEMMRTNV 211

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYA-IKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
           RP + TL +VL  C+  G ++ G + H        F  +  +V   + +Y+KC  +  A 
Sbjct: 212 RPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIAS 271

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
            LF+     K+ V+W T+I GY+      +A+  F++M   G   N  T  S+L ACA +
Sbjct: 272 GLFEGL-SCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHL 330

Query: 249 SARDFGAQVHGCILS--SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            A D G  +H  I     G      ++++LIDMYAKCGD+++A ++       +  SWN+
Sbjct: 331 GAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNA 390

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI---- 362
           MI GFA  G    A  LF +M    I+ DD T   +L+  + +  L+  + +   +    
Sbjct: 391 MIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDY 450

Query: 363 -VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM-QDKDVISWTSLITGCAYHGSYEE 420
            +    E Y      +ID+    G    A  + ++M  + D + W SL+  C  HG+ E 
Sbjct: 451 NITPKLEHY----GCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLEL 506

Query: 421 ALKYFSDMRISGICPD----HVVVSSILSACAELTVLEFGQQV--HAVFLKSGGCSSLSV 474
           A  +    ++  I P+    +V++S+I +       +   ++V       K  GCSS+ +
Sbjct: 507 AESFAQ--KLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEI 564

Query: 475 DN 476
           D+
Sbjct: 565 DS 566


>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
 gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
          Length = 724

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 246/608 (40%), Positives = 371/608 (61%), Gaps = 41/608 (6%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           + ++L  C    A   G QVH  I +SG    +Y+ + L+DMYAKCG L  A ++ +   
Sbjct: 122 YLTLLKFCLKQRALKEGKQVHAHIKTSG-SIGLYISNRLLDMYAKCGSLVDAEKVFDEMV 180

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASN------- 349
             +  SWN MI G+ + G  ++A +LF KM  RD    +F++ ++++ C   N       
Sbjct: 181 HRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRD----NFSWTAIISGCVQHNRPEEALE 236

Query: 350 ----------------------------IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMY 381
                                         L+  K +H  I++ G +  + V  +L+DMY
Sbjct: 237 LYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMY 296

Query: 382 AKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVS 441
            K G+++ A  +F+ M+++DV+SWT++I     +G  EE    F  +  S I P+    +
Sbjct: 297 GKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFA 356

Query: 442 SILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR 501
            +L+ACA+L   + G+Q+HA  ++ G  S  S  ++LV +Y+KCG I +A  VF+ +   
Sbjct: 357 GVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQP 416

Query: 502 DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYF 561
           D+ +WT+L++G AQ+G+  +AL F++ +L  GTKPD I F+G+L AC+HAGL +    YF
Sbjct: 417 DLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYF 476

Query: 562 ESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGD 621
            S+ + +G+    DHYAC+IDLL R+G+  EA++++++M  +PD  +W ALL  CR+HG+
Sbjct: 477 HSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGN 536

Query: 622 LELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVE 681
           LEL +RAA +LFE+EP N   YV L+N+Y++AG   + A +R+ M SRGI K+PG SW+E
Sbjct: 537 LELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMSWIE 596

Query: 682 TNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYH 741
              +VH+F   D  HP   +I   + E+   +KE GYVPD NF LH+VE E KE  L+YH
Sbjct: 597 IRREVHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKEENLSYH 656

Query: 742 SEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAG 801
           SEKLAVAFG+++ P G PI++FKNLR C DCH A+K+IS +  R II+RDSNRFH F+ G
Sbjct: 657 SEKLAVAFGIISTPSGTPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFHCFEGG 716

Query: 802 NCSCGDYW 809
           +CSC DYW
Sbjct: 717 SCSCKDYW 724



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 154/583 (26%), Positives = 267/583 (45%), Gaps = 53/583 (9%)

Query: 8   ILNFSLRCRSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDG 67
           +L F L+ R+   G   + H   +        NR L  ++  G + +A ++F++M  RD 
Sbjct: 125 LLKFCLKQRALKEGKQVHAHIKTSGSIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRDL 184

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
            +WN MI+ Y   G   +A+ LF++ P ++ F+W+++I G   +    EA EL+  MQ  
Sbjct: 185 CSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQKH 244

Query: 128 GYRPS-QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
            Y  S + T+ + L   +    L  G++ HG+ ++   D +  V   L+DMY KC  I E
Sbjct: 245 DYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEE 304

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A Y+F    + ++ V+WTTMI  Y +NG   +    FR +    +  N FTF  +L ACA
Sbjct: 305 ARYIFDKMEE-RDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACA 363

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            ++A D G Q+H  ++  GF++     SAL+ MY+KCGD+++A+ + E     +  SW S
Sbjct: 364 DLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTS 423

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKT 365
           ++VG+A+ G H +AL  F+ +     K D   +  VL+ C  + +     +  HS+  K 
Sbjct: 424 LLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKH 483

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGSYEEALKY 424
           G          +ID+ A+ G    A  + N M  K D   W +L+ GC  HG+ E     
Sbjct: 484 GLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLE----- 538

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
                              L+  A  ++ E   +  A ++            +L  +YA 
Sbjct: 539 -------------------LAKRAAKSLFEIEPENPATYV------------TLANIYAS 567

Query: 485 CGCINDANRVFDSMHTRDVI-----TWTAL-------IMGCAQNGKGKEALQFYDQMLAR 532
            G   +   + ++M +R ++     +W  +        +G   + K KE L++  ++  R
Sbjct: 568 AGMRAEEANIRETMDSRGIVKKPGMSWIEIRREVHVFSVGDNSHPKSKEILEYLSELSKR 627

Query: 533 GTKPDYITFVG-LLFACSHAGLAENARWYFESMDKVYGIKPGP 574
             +  Y+     +L         EN  ++ E +   +GI   P
Sbjct: 628 MKEVGYVPDTNFVLHDVELEQKEENLSYHSEKLAVAFGIISTP 670


>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 240/611 (39%), Positives = 358/611 (58%)

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           N   W TMI G         AI  +  MR  G   N FT P +L ACA       G ++H
Sbjct: 78  NIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIH 137

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
             ++ +G++ +V+V+++L+ +Y KC + D A ++ +     N VSW ++I G+   G  +
Sbjct: 138 SLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFR 197

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           EA+  FKK+    +K D F+   VL   A   D  + + +   I  +G     FV  +L+
Sbjct: 198 EAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLL 257

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
           DMY K GNL+ A ++F+ M +KD++SW+++I G A++G  ++AL  F  M+   + PD  
Sbjct: 258 DMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCY 317

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
            +  +LSACA L  L+ G    ++  ++   S+  +  +L+ +Y+KCG +  A  +F +M
Sbjct: 318 TMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAM 377

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENAR 558
             +D + W A+++G + NG  K     +  +   G +PD  TF+GLL  C+H G     R
Sbjct: 378 KKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGR 437

Query: 559 WYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRV 618
            +F +M +V+ + P  +HY CM+DLLGR+G L EA  L++ M  +P+A VW ALL  C++
Sbjct: 438 QFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKL 497

Query: 619 HGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCS 678
           H D  L E+    L ELEP N+  YVQLSN+YS   +WE+A ++R  MK + I+K   CS
Sbjct: 498 HKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACS 557

Query: 679 WVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGL 738
           W+E +  VH F+  D+ H L   IY+K+DE+   +K  G+VP   F L ++EEE KE  L
Sbjct: 558 WIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFL 617

Query: 739 AYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHF 798
            YHSEKLAVAFGL+  P    IR+ KNLRVCGDCH A+K IS +  R II+RD+NRFH F
Sbjct: 618 GYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTF 677

Query: 799 KAGNCSCGDYW 809
             G+CSC DYW
Sbjct: 678 IDGSCSCRDYW 688



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 135/472 (28%), Positives = 243/472 (51%), Gaps = 9/472 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D+D +  N ++    + G    +K +F++    N F W+++I G  +     +A  L+  
Sbjct: 45  DQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGS 104

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+  G+ P+ +T+  VL+ C+ K  ++ G + H   +K  +D + FV T L+ +Y KC  
Sbjct: 105 MRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDN 164

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
             +A  +F   PD KN V+WT +ITGY  +G+  +AI  F+ +   G++ + F+   +L 
Sbjct: 165 FDDALKVFDDIPD-KNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLA 223

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           ACA +     G  +   I  SG   NV+V ++L+DMY KCG+L+ A  +       + VS
Sbjct: 224 ACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVS 283

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           W++MI G+A  G  ++AL LF +M + ++K D +T   VL+  A+   L+      SL+ 
Sbjct: 284 WSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMD 343

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           +  F     +  ALIDMY+K G++  A+ +F  M+ KD + W +++ G + +G  +    
Sbjct: 344 RNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFS 403

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ----VHAVFLKSGGCSSLSVDNSLV 479
            FS +   GI PD      +L  C     +  G+Q    +  VF  +    S+     +V
Sbjct: 404 LFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLT---PSIEHYGCMV 460

Query: 480 LVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQML 530
            +  + G +N+A+++ ++M  + + + W AL+ GC  +     A Q   +++
Sbjct: 461 DLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLI 512



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 189/380 (49%), Gaps = 6/380 (1%)

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
            +H  +L    + + Y+ + ++      G  + ++ +    +  N   WN+MI G   + 
Sbjct: 34  HIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKD 93

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
              +A+ L+  M       ++FT P VL   A  +D+     +HSL+VK G++   FV  
Sbjct: 94  CFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKT 153

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
           +L+ +Y K  N D A  VF+ + DK+V+SWT++ITG    G + EA+  F  +   G+ P
Sbjct: 154 SLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKP 213

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           D   +  +L+ACA L     G+ +      SG   ++ V  SL+ +Y KCG +  AN +F
Sbjct: 214 DSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIF 273

Query: 496 DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAE 555
            +M  +D+++W+ +I G A NG  ++AL  + QM +   KPD  T VG+L AC+  G  +
Sbjct: 274 SAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALD 333

Query: 556 NARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
              W    MD+   +   P     +ID+  + G + +A  +   M  + D  VW A++  
Sbjct: 334 LGIWASSLMDRNEFLS-NPVLGTALIDMYSKCGSVTQAWEIFTAM-KKKDRVVWNAMMVG 391

Query: 616 CRVHGDLELGERAANNLFEL 635
             ++G      +A  +LF L
Sbjct: 392 LSMNGH----AKAVFSLFSL 407



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/351 (24%), Positives = 162/351 (46%), Gaps = 34/351 (9%)

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
           N  K +H+ +++   +   ++ N ++      G+ + + +VF+ +++ ++  W ++I G 
Sbjct: 30  NQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGL 89

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
                +++A+  +  MR  G  P++  +  +L ACA    +  G ++H++ +K+G    +
Sbjct: 90  VSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDV 149

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
            V  SL+ +Y KC   +DA +VFD +  ++V++WTA+I G   +G  +EA+  + ++L  
Sbjct: 150 FVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEM 209

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWY----------------------------FESM 564
           G KPD  + V +L AC+  G   +  W                              E  
Sbjct: 210 GLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERA 269

Query: 565 DKVYGIKPGPD--HYACMIDLLGRSGKLIEAKALLDQMVGE---PDATVWKALLSACRVH 619
           + ++   P  D   ++ MI     +G   +A  L  QM  E   PD      +LSAC   
Sbjct: 270 NLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATL 329

Query: 620 GDLELGERAANNLFELEPM-NAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
           G L+LG  A++ +   E + N +    L +MYS  G    A  +   MK +
Sbjct: 330 GALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKK 380


>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 240/611 (39%), Positives = 358/611 (58%)

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           N   W TMI G         AI  +  MR  G   N FT P +L ACA       G ++H
Sbjct: 78  NIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIH 137

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
             ++ +G++ +V+V+++L+ +Y KC + D A ++ +     N VSW ++I G+   G  +
Sbjct: 138 SLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFR 197

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           EA+  FKK+    +K D F+   VL   A   D  + + +   I  +G     FV  +L+
Sbjct: 198 EAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLL 257

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
           DMY K GNL+ A ++F+ M +KD++SW+++I G A++G  ++AL  F  M+   + PD  
Sbjct: 258 DMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCY 317

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
            +  +LSACA L  L+ G    ++  ++   S+  +  +L+ +Y+KCG +  A  +F +M
Sbjct: 318 TMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAM 377

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENAR 558
             +D + W A+++G + NG  K     +  +   G +PD  TF+GLL  C+H G     R
Sbjct: 378 KRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGR 437

Query: 559 WYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRV 618
            +F +M +V+ + P  +HY CM+DLLGR+G L EA  L++ M  +P+A VW ALL  C++
Sbjct: 438 QFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKL 497

Query: 619 HGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCS 678
           H D  L E+    L ELEP N+  YVQLSN+YS   +WE+A ++R  MK + I+K   CS
Sbjct: 498 HKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACS 557

Query: 679 WVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGL 738
           W+E +  VH F+  D+ H L   IY+K+DE+   +K  G+VP   F L ++EEE KE  L
Sbjct: 558 WIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFL 617

Query: 739 AYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHF 798
            YHSEKLAVAFGL+  P    IR+ KNLRVCGDCH A+K IS +  R II+RD+NRFH F
Sbjct: 618 GYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTF 677

Query: 799 KAGNCSCGDYW 809
             G+CSC DYW
Sbjct: 678 IDGSCSCRDYW 688



 Score =  215 bits (548), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 135/472 (28%), Positives = 243/472 (51%), Gaps = 9/472 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D+D +  N ++    + G    +K +F++    N F W+++I G  +     +A  L+  
Sbjct: 45  DQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGS 104

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+  G+ P+ +T+  VL+ C+ K  ++ G + H   +K  +D + FV T L+ +Y KC  
Sbjct: 105 MRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDN 164

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
             +A  +F   PD KN V+WT +ITGY  +G+  +AI  F+ +   G++ + F+   +L 
Sbjct: 165 FDDALKVFDDIPD-KNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLA 223

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           ACA +     G  +   I  SG   NV+V ++L+DMY KCG+L+ A  +       + VS
Sbjct: 224 ACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVS 283

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           W++MI G+A  G  ++AL LF +M + ++K D +T   VL+  A+   L+      SL+ 
Sbjct: 284 WSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMD 343

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           +  F     +  ALIDMY+K G++  A+ +F  M+ KD + W +++ G + +G  +    
Sbjct: 344 RNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFS 403

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ----VHAVFLKSGGCSSLSVDNSLV 479
            FS +   GI PD      +L  C     +  G+Q    +  VF  +    S+     +V
Sbjct: 404 LFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLT---PSIEHYGCMV 460

Query: 480 LVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQML 530
            +  + G +N+A+++ ++M  + + + W AL+ GC  +     A Q   +++
Sbjct: 461 DLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLI 512



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 188/380 (49%), Gaps = 6/380 (1%)

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
            +H  +L    + + Y+ + ++      G  + ++ +    +  N   WN+MI G   + 
Sbjct: 34  HIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKD 93

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
              +A+ L+  M       ++FT P VL   A  +D+     +HSL+VK G++   FV  
Sbjct: 94  CFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKT 153

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
           +L+ +Y K  N D A  VF+ + DK+V+SWT++ITG    G + EA+  F  +   G+ P
Sbjct: 154 SLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKP 213

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           D   +  +L+ACA L     G+ +      SG   ++ V  SL+ +Y KCG +  AN +F
Sbjct: 214 DSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIF 273

Query: 496 DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAE 555
            +M  +D+++W+ +I G A NG  ++AL  + QM +   KPD  T VG+L AC+  G  +
Sbjct: 274 SAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALD 333

Query: 556 NARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
              W    MD+   +   P     +ID+  + G + +A  +   M    D  VW A++  
Sbjct: 334 LGIWASSLMDRNEFLS-NPVLGTALIDMYSKCGSVTQAWEIFTAM-KRKDRVVWNAMMVG 391

Query: 616 CRVHGDLELGERAANNLFEL 635
             ++G      +A  +LF L
Sbjct: 392 LSMNGH----AKAVFSLFSL 407



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/351 (24%), Positives = 162/351 (46%), Gaps = 34/351 (9%)

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
           N  K +H+ +++   +   ++ N ++      G+ + + +VF+ +++ ++  W ++I G 
Sbjct: 30  NQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGL 89

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
                +++A+  +  MR  G  P++  +  +L ACA    +  G ++H++ +K+G    +
Sbjct: 90  VSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDV 149

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
            V  SL+ +Y KC   +DA +VFD +  ++V++WTA+I G   +G  +EA+  + ++L  
Sbjct: 150 FVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEM 209

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWY----------------------------FESM 564
           G KPD  + V +L AC+  G   +  W                              E  
Sbjct: 210 GLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERA 269

Query: 565 DKVYGIKPGPD--HYACMIDLLGRSGKLIEAKALLDQMVGE---PDATVWKALLSACRVH 619
           + ++   P  D   ++ MI     +G   +A  L  QM  E   PD      +LSAC   
Sbjct: 270 NLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATL 329

Query: 620 GDLELGERAANNLFELEPM-NAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
           G L+LG  A++ +   E + N +    L +MYS  G    A  +   MK +
Sbjct: 330 GALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRK 380


>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
          Length = 802

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 265/721 (36%), Positives = 398/721 (55%), Gaps = 75/721 (10%)

Query: 163 CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK-NHVAWTTMITGYSQNGYGFKAIE 221
           C D      T LV  YA    +  A   F   P  + + V    +I+ Y++  +   A+ 
Sbjct: 83  CADPCPVSATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVA 142

Query: 222 CFRDMRVEG-VESNQFTFPSILTA---CAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
            FR +   G +  + ++F ++L+A      +S R   AQ+H  +L SG    + V +AL+
Sbjct: 143 VFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHC-AQLHCSVLKSGAGGALSVCNALV 201

Query: 278 DMYAKC----------------------------------GDLDSARRLLEYSEIDNEVS 303
            +Y KC                                  GD+ +AR + E  +   +V 
Sbjct: 202 ALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVV 261

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN+MI G+   G   EA  LF++M    + +D+FT+ SVL+  A+     + KSVH  I+
Sbjct: 262 WNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQII 321

Query: 364 K--TGF--EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA------ 413
           +    F  E    VNNAL+  Y+K GN+  A  +F+ M  KDV+SW ++++G        
Sbjct: 322 RLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLD 381

Query: 414 ------------------------YHGSY-EEALKYFSDMRISGICPDHVVVSSILSACA 448
                                    HG + E+ALK F+ MR   + P     +  ++AC 
Sbjct: 382 KAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACG 441

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
           EL  L+ G+Q+H   ++ G   S S  N+L+ +YA+CG + +A+ +F  M   D ++W A
Sbjct: 442 ELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNA 501

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
           +I    Q+G G+EAL+ +D+M+A G  PD I+F+ +L AC+H+GL +    YFESM + +
Sbjct: 502 MISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDF 561

Query: 569 GIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
           GI PG DHY  +IDLLGR+G++ EA+ L+  M  EP  ++W+A+LS CR  GD+ELG  A
Sbjct: 562 GIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHA 621

Query: 629 ANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHI 688
           A+ LF++ P +   Y+ LSN YS AG W DAARVRKLM+ RG++KEPGCSW+E  ++VH+
Sbjct: 622 ADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHV 681

Query: 689 FISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVA 748
           F+  D  HP   ++Y  ++ +   +++ GYVPD    LH++E   KE  L  HSE+LAV 
Sbjct: 682 FLVGDTKHPEAHEVYKFLEMVGAKMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVG 741

Query: 749 FGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDY 808
           FGLL LP GA + + KNLR+C DCH A+ ++S    R I++RD  RFHHFK G CSCG+Y
Sbjct: 742 FGLLNLPPGATVTVLKNLRICDDCHAAIMFMSKAVGREIVVRDVRRFHHFKDGECSCGNY 801

Query: 809 W 809
           W
Sbjct: 802 W 802



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 142/536 (26%), Positives = 226/536 (42%), Gaps = 88/536 (16%)

Query: 54  EAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGL 113
           +A ++ ++M ++D  TW TM+  Y   G +  A+ +F E   K    W+++I GY + G+
Sbjct: 215 DARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGM 274

Query: 114 DIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT----CFDLNAF 169
            +EAFELF +M LE     ++T  +VL  C+  GL   G+  HG  I+       +    
Sbjct: 275 AVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALP 334

Query: 170 VVTGLVDMYAKC-------------------------------KCIFEAEYLFKMFPDGK 198
           V   LV  Y+KC                                C+ +A  +F+  P  K
Sbjct: 335 VNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPY-K 393

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           N ++W  M++GY   G+   A++ F  MR E V+   +T+   + AC  + A   G Q+H
Sbjct: 394 NELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLH 453

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
           G I+  GFE +    +ALI MYA+CG +  A  +       + VSWN+MI    + G  +
Sbjct: 454 GHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGR 513

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           EAL LF +M A  I  D  ++ +VL   A N         HS +V  GF  ++ +     
Sbjct: 514 EALELFDRMVAEGIYPDRISFLTVLT--ACN---------HSGLVDEGFRYFESMKRD-- 560

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
                          F ++  +D   +T LI      G   EA      M      P   
Sbjct: 561 ---------------FGIIPGED--HYTRLIDLLGRAGRIGEARDLIKTMPFE---PTPS 600

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV---YAKCGCINDANRVF 495
           +  +ILS C     +E G        K     +   D + +L+   Y+  GC  DA RV 
Sbjct: 601 IWEAILSGCRTSGDMELGAHAADQLFK----MTPQHDGTYILLSNTYSAAGCWVDAARVR 656

Query: 496 DSMHTRDV-----ITWT-------ALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
             M  R V      +W          ++G  ++ +  E  +F + + A+  K  Y+
Sbjct: 657 KLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGAKMRKLGYV 712



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 148/283 (52%), Gaps = 4/283 (1%)

Query: 36  ASDLNRALVDF-SNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP 94
           A  +N ALV F S  G I  A ++F+ M+ +D  +WNT+++ Y  S  L +A ++F E P
Sbjct: 332 ALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMP 391

Query: 95  FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ 154
           +KN  +W  ++ GY + G   +A +LF +M+ E  +P  YT    +  C   G L+ G+Q
Sbjct: 392 YKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQ 451

Query: 155 FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
            HG+ ++  F+ +      L+ MYA+C  + EA  +F + P+  + V+W  MI+   Q+G
Sbjct: 452 LHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPN-IDSVSWNAMISALGQHG 510

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQ 273
           +G +A+E F  M  EG+  ++ +F ++LTAC      D G +    +    G        
Sbjct: 511 HGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHY 570

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIVGFARQG 315
           + LID+  + G +  AR L++    +   S W +++ G    G
Sbjct: 571 TRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSG 613


>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
 gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
          Length = 746

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 251/656 (38%), Positives = 391/656 (59%), Gaps = 2/656 (0%)

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQN 213
           Q +   + T      F++  LV+  +    +  A  LF  FPD  +   W  ++  YS++
Sbjct: 93  QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPD-PDVFLWNAIVRCYSRH 151

Query: 214 GYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
           G+   AIE +  M+V  V  + F+FP +L AC+A+ A + G +VHG I   GFE++V+VQ
Sbjct: 152 GFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQ 211

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
           + L+ +YAKCG++  A  +         VSW S+I G+A+ G   EAL +F +M   +++
Sbjct: 212 NGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVR 271

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
            D     SVL  +    DL + KS+H  ++K G E    +  +L  +YAK G++  A + 
Sbjct: 272 PDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLF 331

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           FN +++  +I W ++I+G   +G  EEA++ F  M+   I PD + V+S ++ACA++  L
Sbjct: 332 FNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSL 391

Query: 454 EFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC 513
           E  + +      S   + + V+ SL+  YAKCG ++ A  VFD +  +DV+ W+A+++G 
Sbjct: 392 ELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGY 451

Query: 514 AQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPG 573
             +G+G+E++  +  M   G  P+ +TFVGLL AC ++GL E     F  M + YGI+P 
Sbjct: 452 GLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM-RDYGIEPR 510

Query: 574 PDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLF 633
             HYAC++DLLGR+G L  A   +  M  EP  +VW ALLSAC++H  + LGE AA  LF
Sbjct: 511 HQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLF 570

Query: 634 ELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISED 693
            L+P N   YVQLSN+Y+++  W+  A+VR LM+ +G+ K  G S +E N ++  F + D
Sbjct: 571 SLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGD 630

Query: 694 RGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLT 753
           + HP   +I+ +++++   +KEAG+VP     LH++  E  E  L  HSE+LA+A+GL++
Sbjct: 631 KTHPRSKEIFEEVEDLERRLKEAGFVPHTESVLHDLNYEETEETLCNHSERLAIAYGLIS 690

Query: 754 LPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            P G  +RI KNLR C +CH A+K IS +  R I++RD+ RFHHFK G CSCGDYW
Sbjct: 691 TPPGTTLRITKNLRACDNCHAAIKLISKLVSREIVVRDACRFHHFKDGACSCGDYW 746



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 127/390 (32%), Positives = 209/390 (53%), Gaps = 1/390 (0%)

Query: 67  GFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL 126
           GF    ++   +N G +  A+KLF++ P  + F W++++  YS +G    A E++ +MQ+
Sbjct: 107 GFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQV 166

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
               P  ++   VL+ CS    L+ G + HG   +  F+ + FV  GLV +YAKC  I  
Sbjct: 167 ACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVR 226

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A  +F    D +  V+WT++I+GY+QNG   +A+  F +MR   V  +     S+L A  
Sbjct: 227 ANAVFGRLVD-RTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYT 285

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            V   + G  +HGC++  G E    +  +L  +YAKCG +  AR      E  + + WN+
Sbjct: 286 DVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNA 345

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           MI G+ + G+ +EA+ LF+ M +++I+ D  T  S +   A    L  A+ +   I  + 
Sbjct: 346 MISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSE 405

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
           F     VN +LID YAK G++D A  VF+ + DKDV+ W++++ G   HG   E++  F 
Sbjct: 406 FRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFH 465

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFG 456
            MR +G+ P+ V    +L+AC    ++E G
Sbjct: 466 AMRQAGVSPNDVTFVGLLTACKNSGLVEEG 495



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 176/361 (48%), Gaps = 2/361 (0%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           GQ+F    + D F  N ++A YA  G +  A  +F     +   +W+S+I GY+  G  I
Sbjct: 197 GQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPI 256

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  +F +M+    RP    L +VLR  +    L+ G+  HG  IK   +    ++  L 
Sbjct: 257 EALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLT 316

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
            +YAKC  +  A   F    +  + + W  MI+GY +NGY  +AIE FR M+ + +  + 
Sbjct: 317 SLYAKCGHVMVARLFFNQV-ENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDS 375

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            T  S + ACA + + +    +   I  S F  +V V ++LID YAKCG +D AR + + 
Sbjct: 376 ITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDR 435

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               + V W++M+VG+   G  +E++ LF  M    +  +D T+  +L    ++  +   
Sbjct: 436 IPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEG 495

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAY 414
             +   +   G E        ++D+  + G+LD A+  V N+  +  V  W +L++ C  
Sbjct: 496 WDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKI 555

Query: 415 H 415
           H
Sbjct: 556 H 556



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 162/342 (47%), Gaps = 40/342 (11%)

Query: 333 KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM 392
           K D F Y S+++    +I   +   +++ ++ TG +   F+   L++  +  G + CA  
Sbjct: 73  KPDKF-YASLID---DSIHKTHLNQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARK 128

Query: 393 VFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV 452
           +F+   D DV  W +++   + HG +  A++ ++ M+++ + PD      +L AC+ L  
Sbjct: 129 LFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPA 188

Query: 453 LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMG 512
           LE G++VH    + G  S + V N LV +YAKCG I  AN VF  +  R +++WT++I G
Sbjct: 189 LEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISG 248

Query: 513 CAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKP 572
            AQNG+  EAL+ + +M     +PD+I  V +L A +     E+ +     + K+ G++ 
Sbjct: 249 YAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKM-GLEC 307

Query: 573 GPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNL 632
             D    +  L  + G ++ A+   +Q V  P    W A++S                  
Sbjct: 308 EFDLLISLTSLYAKCGHVMVARLFFNQ-VENPSLIFWNAMISG----------------- 349

Query: 633 FELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
                            Y   G  E+A  + +LMKS+ IR +
Sbjct: 350 -----------------YVKNGYAEEAIELFRLMKSKNIRPD 374



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 9/124 (7%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE----- 92
           +N +L+D ++  G +D A  +F+++ D+D   W+ M+  Y   G+ RE+  LF+      
Sbjct: 412 VNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAG 471

Query: 93  -TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQR 151
            +P  N  T+  L+    N GL  E ++LF +M+  G  P       V+ L    G L R
Sbjct: 472 VSP--NDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDR 529

Query: 152 GEQF 155
              F
Sbjct: 530 AYNF 533


>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 268/650 (41%), Positives = 381/650 (58%), Gaps = 40/650 (6%)

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A  LF   P+ ++ V+W  M++GY+QNGY  +A E F +M  +    N  ++  +L A  
Sbjct: 49  ARLLFDQMPE-RDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK----NSISWNGMLAAYV 103

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
             + R   A+    +  S  +  +   + ++  Y K   L  AR + +     +EVSWN+
Sbjct: 104 Q-NGRIEDARR---LFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNT 159

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV-------- 358
           MI G+A+ G   EA  LF++   RD+    FT+ ++++ +  N  L+ A+ V        
Sbjct: 160 MISGYAQNGELLEAQRLFEESPVRDV----FTWTAMVSGYVQNGMLDEARRVFDGMPEKN 215

Query: 359 ----HSLIV-----------KTGFEGYKFVN----NALIDMYAKQGNLDCAFMVFNLMQD 399
               +++I            +  FE     N    N +I  YA+ G++  A   F+ M  
Sbjct: 216 SVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQ 275

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           +D ISW ++I G A  G  EEAL  F +M+  G   +    +S LS CAE+  LE G+QV
Sbjct: 276 RDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQV 335

Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKG 519
           H   +K+G  S   V N+L+++Y KCG I+DA  VF+ +  ++V++W  +I G A++G G
Sbjct: 336 HGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFG 395

Query: 520 KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC 579
           KEAL  ++ M   G  PD +T VG+L ACSH GL +    YF SM + YGI     HY C
Sbjct: 396 KEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTC 455

Query: 580 MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMN 639
           MIDLLGR+G+L +A+ L+  M  EPDA  W ALL A R+HG+ ELGE+AA  +FE+EP N
Sbjct: 456 MIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDN 515

Query: 640 AMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLR 699
           +  YV LSN+Y+ +G+W D  R+R  M+ RG++K PG SWVE  +++H F   D  HP R
Sbjct: 516 SGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHPER 575

Query: 700 TDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAP 759
             IY+ ++E+ L +K+ GYV      LH+VEEE K   L YHSEKLAVAFG+L +P G P
Sbjct: 576 DRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAGRP 635

Query: 760 IRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           IR+ KNLRVC DCH AMK+IS +  R IILRDS+RFHHF  G CSCGDYW
Sbjct: 636 IRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 685



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 143/486 (29%), Positives = 239/486 (49%), Gaps = 50/486 (10%)

Query: 41  RALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           R  V + N   +  A  LF++M +RD  +WN M++ YA +G ++EAK++F+E P KN  +
Sbjct: 38  RGCVRYRN---LRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSIS 94

Query: 101 WSSLIYGYSNYGLDIEAFELF----------WQMQLEGYRPSQYTLDNVLRLCSLKGLLQ 150
           W+ ++  Y   G   +A  LF          W   + GY           RL   +G+  
Sbjct: 95  WNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRN-------RLVDARGIFD 147

Query: 151 RGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
           R  +    +  T           ++  YA+   + EA+ LF+  P  ++   WT M++GY
Sbjct: 148 RMPERDEVSWNT-----------MISGYAQNGELLEAQRLFEESPV-RDVFTWTAMVSGY 195

Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEA-- 268
            QNG   +A   F  M     E N  ++ +I+         D   ++        FEA  
Sbjct: 196 VQNGMLDEARRVFDGM----PEKNSVSWNAIIAGYVQCKRMDQAREL--------FEAMP 243

Query: 269 --NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK 326
             NV   + +I  YA+ GD+  AR   +     + +SW ++I G+A+ G+ +EAL LF +
Sbjct: 244 CQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVE 303

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
           M     +++  T+ S L+  A    L   K VH  +VK G E   +V NAL+ MY K GN
Sbjct: 304 MKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGN 363

Query: 387 LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSA 446
           +D A++VF  +++K+V+SW ++I G A HG  +EAL  F  M+ +GI PD V +  +LSA
Sbjct: 364 IDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSA 423

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LVLVYAKCGCINDANRVFDSMH-TRDVI 504
           C+   +++ G +      +  G ++ S   + ++ +  + G ++DA  +  +M    D  
Sbjct: 424 CSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAA 483

Query: 505 TWTALI 510
           TW AL+
Sbjct: 484 TWGALL 489



 Score =  209 bits (532), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 125/378 (33%), Positives = 197/378 (52%), Gaps = 31/378 (8%)

Query: 54  EAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGL 113
           +A  +F++M +RD  +WNTMI+ YA +G L EA++LF E+P ++ FTW++++ GY   G+
Sbjct: 141 DARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGM 200

Query: 114 DIEAFELF----------WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC 163
             EA  +F          W   + GY                K + Q  E F     +  
Sbjct: 201 LDEARRVFDGMPEKNSVSWNAIIAGY-------------VQCKRMDQARELFEAMPCQNV 247

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
              N  ++TG    YA+   I +A   F   P  ++ ++W  +I GY+Q+GYG +A+  F
Sbjct: 248 SSWNT-MITG----YAQNGDIAQARNFFDRMPQ-RDSISWAAIIAGYAQSGYGEEALHLF 301

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
            +M+ +G   N+ TF S L+ CA ++A + G QVHG ++ +G E+  YV +AL+ MY KC
Sbjct: 302 VEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKC 361

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
           G++D A  + E  E    VSWN+MI G+AR GF KEAL LF+ M    I  DD T   VL
Sbjct: 362 GNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVL 421

Query: 344 N-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKD 401
           + C  + +     +  +S+    G          +ID+  + G LD A  ++ N+  + D
Sbjct: 422 SACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPD 481

Query: 402 VISWTSLITGCAYHGSYE 419
             +W +L+     HG+ E
Sbjct: 482 AATWGALLGASRIHGNTE 499



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 148/285 (51%), Gaps = 2/285 (0%)

Query: 30  GNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKL 89
           G   K +   N  +  +     +D+A +LFE M  ++  +WNTMI  YA +G + +A+  
Sbjct: 210 GMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNF 269

Query: 90  FNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLL 149
           F+  P ++  +W+++I GY+  G   EA  LF +M+ +G R ++ T  + L  C+    L
Sbjct: 270 FDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAAL 329

Query: 150 QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
           + G+Q HG  +K   +   +V   L+ MY KC  I +A  +F+   + K  V+W TMI G
Sbjct: 330 ELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEE-KEVVSWNTMIAG 388

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ-VHGCILSSGFEA 268
           Y+++G+G +A+  F  M+  G+  +  T   +L+AC+     D G +  +      G  A
Sbjct: 389 YARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITA 448

Query: 269 NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           N    + +ID+  + G LD A+ L++    + + +    ++G +R
Sbjct: 449 NSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASR 493



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 163/360 (45%), Gaps = 35/360 (9%)

Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
           +L +AR L +     + VSWN+M+ G+A+ G+ KEA  +F +M  +    +  ++  +L 
Sbjct: 45  NLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK----NSISWNGMLA 100

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
            +  N  + +A+ +     K  +E   +  N ++  Y K+  L  A  +F+ M ++D +S
Sbjct: 101 AYVQNGRIEDARRLFE--SKADWELISW--NCMMGGYVKRNRLVDARGIFDRMPERDEVS 156

Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS------------ILSACAELTV 452
           W ++I+G A +G   EA + F +  +  +     +VS             +     E   
Sbjct: 157 WNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNS 216

Query: 453 LEFG------------QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT 500
           + +              Q   +F ++  C ++S  N+++  YA+ G I  A   FD M  
Sbjct: 217 VSWNAIIAGYVQCKRMDQARELF-EAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQ 275

Query: 501 RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWY 560
           RD I+W A+I G AQ+G G+EAL  + +M   G + +  TF   L  C+     E  +  
Sbjct: 276 RDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQV 335

Query: 561 FESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
              + K  G++ G      ++ +  + G + +A  + +  + E +   W  +++    HG
Sbjct: 336 HGRVVKA-GLESGCYVGNALLVMYCKCGNIDDAYIVFEG-IEEKEVVSWNTMIAGYARHG 393



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 139/288 (48%), Gaps = 23/288 (7%)

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
           NL  A ++F+ M ++DV+SW ++++G A +G  +EA + F +M     C + +  + +L+
Sbjct: 45  NLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM----PCKNSISWNGMLA 100

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
           A  +   +E  +++     +S     L   N ++  Y K   + DA  +FD M  RD ++
Sbjct: 101 AYVQNGRIEDARRL----FESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVS 156

Query: 506 WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMD 565
           W  +I G AQNG+  EA + +++   R    D  T+  ++      G+ + AR  F+ M 
Sbjct: 157 WNTMISGYAQNGELLEAQRLFEESPVR----DVFTWTAMVSGYVQNGMLDEARRVFDGMP 212

Query: 566 KVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELG 625
           +   +      +  +I    +  ++ +A+ L + M  + + + W  +++    +GD+   
Sbjct: 213 EKNSVS-----WNAIIAGYVQCKRMDQARELFEAMPCQ-NVSSWNTMITGYAQNGDIA-- 264

Query: 626 ERAANNLFELEPM-NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIR 672
              A N F+  P  +++ +  +   Y+ +G  E+A  +   MK  G R
Sbjct: 265 --QARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGER 310


>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Brachypodium distachyon]
          Length = 1054

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 290/777 (37%), Positives = 444/777 (57%), Gaps = 22/777 (2%)

Query: 48   NSGEIDEA-GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIY 106
            +SG +D+   ++ +  S  D +  + +++A+A  G L EAK +F     +N  T + LI 
Sbjct: 285  SSGVLDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIV 344

Query: 107  GYSNYGLDIEAFELFWQMQLEGYRPS--------QYTLDNVLRLCSLKGLLQRGEQFHGY 158
            G        EA  +F      G R S           L  V      +  L RG + HG+
Sbjct: 345  GLVKQHCSEEAVGIFM-----GTRDSFVVNTDTFVVLLSAVAEFSIPEDGLMRGREVHGH 399

Query: 159  AIKT-CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
             ++T   DL   +  GLV+MYAKC  I +A  +F++    ++ V+W T+I+   QNG+  
Sbjct: 400  ILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLC-ARDRVSWNTIISVLDQNGFCE 458

Query: 218  KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
             A+  +  MR   +  + F   S L++CA++     G QVH   +  G + +  V +AL+
Sbjct: 459  GAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALV 518

Query: 278  DMYAKCGDLDSARRLLEYSEIDNEVSWNSMI-VGFARQGFHKEALSLFKKMHARDIKIDD 336
             MY  CG    +  +       + VSWNS++ V  +      E++ +F  M    +  + 
Sbjct: 519  KMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGLTPNK 578

Query: 337  FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
             T+ ++L+  +    L   K VH++++K G      V+NAL+  YAK G++D    +F+ 
Sbjct: 579  VTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSS 638

Query: 397  MQDK-DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
            M  + D +SW S+I+G  Y+G  +E +     M  S    D    S +L+ACA +  LE 
Sbjct: 639  MSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALER 698

Query: 456  GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
            G ++HA  ++S   S + V+++L+ +Y+KCG I+ A++VF+SM  ++  +W ++I G A+
Sbjct: 699  GMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYAR 758

Query: 516  NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
            +G G++AL+ +++M   G  PD++TFV +L ACSHAGL +    YFE M+  +GI P  +
Sbjct: 759  HGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFEMMED-HGILPHIE 817

Query: 576  HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGD---LELGERAANNL 632
            HY+C+IDLLGR+GKL++ +  +++M  +P+  +W+ +L ACR   D   ++LG+ A+  L
Sbjct: 818  HYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKDGDRIDLGKEASRML 877

Query: 633  FELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISE 692
             ELEP N + YV  SN Y+  G+WED A+ R  M    ++KE G SWV     VH FI+ 
Sbjct: 878  LELEPQNPVNYVLASNFYAATGRWEDTAKARAAMGGAAMKKEAGQSWVTLGDGVHTFIAG 937

Query: 693  DRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLL 752
            DR HP   +IY K++ ++  IK AGYVP   FAL+++EEE KE  L+YHSEKLAVAF L 
Sbjct: 938  DRSHPNTKEIYEKLNFLIQKIKNAGYVPMTEFALYDLEEENKEELLSYHSEKLAVAFVLT 997

Query: 753  TLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
                  PIRI KNLRVCGDCHTA +YIS +  R IILRDS RFHHF+ G CSCGDYW
Sbjct: 998  RSSSDVPIRIMKNLRVCGDCHTAFRYISQIVCRQIILRDSIRFHHFEDGKCSCGDYW 1054



 Score =  243 bits (621), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 178/587 (30%), Positives = 290/587 (49%), Gaps = 25/587 (4%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
           +L ++    D F  N ++  YA   RL  A+++F+    +N  +W+ L+ GY   G+  E
Sbjct: 81  ELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSGITDE 140

Query: 117 AFELFWQMQLEG---YRPSQYTLDNVLRLCSLKG--LLQRGEQFHGYAIKTCFDLNAFVV 171
           AF +F  M  EG    RP+ +T  +VLR C   G  LL    Q HG   KT +  N  V 
Sbjct: 141 AFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASNTTVC 200

Query: 172 TGLVDMYAKCKC--IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
             L+ MY  C      +A+ +F   P  ++ + W  +++ Y++ GY       F  M  +
Sbjct: 201 NALISMYGNCSVGLPLQAQQVFDTTP-VRDLITWNALMSVYAKKGYVVSTFTLFMAMLHD 259

Query: 230 G----VESNQFTFPSILTACAAVS-ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
                +  N+ TF S++TA +  S +     QV   +L SG  +++YV SAL+  +A+ G
Sbjct: 260 DSAIELRPNEHTFGSLITATSLSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAFARHG 319

Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD-IKIDDFTYPSVL 343
            LD A+ +    +  N V+ N +IVG  +Q   +EA+ +F  M  RD   ++  T+  +L
Sbjct: 320 MLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIF--MGTRDSFVVNTDTFVVLL 377

Query: 344 NCFA----SNIDLNNAKSVHSLIVKTGFEGYKF-VNNALIDMYAKQGNLDCAFMVFNLMQ 398
           +  A        L   + VH  I++TG    K  ++N L++MYAK G +D A  VF L+ 
Sbjct: 378 SAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLC 437

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
            +D +SW ++I+    +G  E A+  +  MR   I P +    S LS+CA L +L  GQQ
Sbjct: 438 ARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQ 497

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMG--CAQN 516
           VH   +K G     SV N+LV +Y  CG  +++  +F+SM   D+++W + IMG   + +
Sbjct: 498 VHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNS-IMGVMVSSH 556

Query: 517 GKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH 576
               E+++ +  M+  G  P+ +TFV LL A S   + E  +     + K   I+     
Sbjct: 557 APTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVD 616

Query: 577 YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
            A M     +SG +   + L   M G  DA  W +++S    +G L+
Sbjct: 617 NALM-SCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQ 662



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 175/637 (27%), Positives = 300/637 (47%), Gaps = 60/637 (9%)

Query: 54  EAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGL 113
           +A Q+F+    RD  TWN +++ YA  G +     LF            ++++       
Sbjct: 217 QAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLF-----------MAMLH------- 258

Query: 114 DIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL----KGLLQRGEQFHGYAIKTCFDLNAF 169
           D  A EL         RP+++T  +++   SL     G+L   +Q     +K+    + +
Sbjct: 259 DDSAIEL---------RPNEHTFGSLITATSLSSCSSGVL---DQVFARVLKSGSSSDLY 306

Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
           V + LV  +A+   + EA+ +F    + +N V    +I G  +     +A+  F   R +
Sbjct: 307 VGSALVSAFARHGMLDEAKDIFINLKE-RNAVTLNGLIVGLVKQHCSEEAVGIFMGTR-D 364

Query: 230 GVESNQFTFPSILTACAAVSARD----FGAQVHGCILSSGF-EANVYVQSALIDMYAKCG 284
               N  TF  +L+A A  S  +     G +VHG IL +G  +  + + + L++MYAKCG
Sbjct: 365 SFVVNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCG 424

Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
            +D A R+       + VSWN++I    + GF + A+  +  M    I   +F   S L+
Sbjct: 425 AIDKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLS 484

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
             AS   L   + VH   VK G +    V+NAL+ MY   G    ++ +FN M + D++S
Sbjct: 485 SCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVS 544

Query: 405 WTSLI-TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVF 463
           W S++    + H    E+++ FS+M  SG+ P+ V   ++LSA + L+VLE G+QVHAV 
Sbjct: 545 WNSIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVV 604

Query: 464 LKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMGCAQNGKGKEA 522
           LK G     +VDN+L+  YAK G ++   ++F SM   RD ++W ++I G   NG  +E 
Sbjct: 605 LKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQET 664

Query: 523 LQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH----YA 578
           +     M+      D  TF  +L AC+     E            +GI+   +      +
Sbjct: 665 MDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEM-----HAFGIRSQLESDVVVES 719

Query: 579 CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM 638
            ++D+  + G++  A  + + M  + +   W +++S    HG   LGE+A     E++  
Sbjct: 720 ALLDMYSKCGRIDYASKVFNSM-SQKNEFSWNSMISGYARHG---LGEKALEIFEEMQRN 775

Query: 639 NAMP----YVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
            A P    +V + +  S AG  +      ++M+  GI
Sbjct: 776 GACPDHVTFVSVLSACSHAGLVDRGLDYFEMMEDHGI 812



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 131/283 (46%), Gaps = 35/283 (12%)

Query: 46  FSNSGEIDEAGQLFEKMSD-RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSL 104
           ++ SG++D   QLF  MS  RD  +WN+MI+ Y  +G L+E               W   
Sbjct: 623 YAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDC----------VW--- 669

Query: 105 IYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCF 164
           +  +SN  LD   F +                  VL  C+    L+RG + H + I++  
Sbjct: 670 LMMHSNQMLDCCTFSI------------------VLNACASVAALERGMEMHAFGIRSQL 711

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
           + +  V + L+DMY+KC  I  A  +F      KN  +W +MI+GY+++G G KA+E F 
Sbjct: 712 ESDVVVESALLDMYSKCGRIDYASKVFNSMSQ-KNEFSWNSMISGYARHGLGEKALEIFE 770

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
           +M+  G   +  TF S+L+AC+     D G      +   G   ++   S +ID+  + G
Sbjct: 771 EMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFEMMEDHGILPHIEHYSCVIDLLGRAG 830

Query: 285 DLDSARRLLEYSEID-NEVSWNSMIVGFARQGFHKEALSLFKK 326
            L   +  +    +  N + W +++V   RQ    + + L K+
Sbjct: 831 KLLKIQEYINRMPMKPNTLIWRTVLVA-CRQSKDGDRIDLGKE 872



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 157/325 (48%), Gaps = 35/325 (10%)

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           ++H  ++  G   ++++ + L+++YAK   L +AR++ +     N VSW  ++ G+   G
Sbjct: 77  RLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSG 136

Query: 316 FHKEALSLFKKM---HARDIKIDDFTYPSVLN-CFASNIDLNN-AKSVHSLIVKTGFEGY 370
              EA  +FK M    +   +   FT+ SVL  C  +  DL   A  VH L+ KT +   
Sbjct: 137 ITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASN 196

Query: 371 KFVNNALIDMYAKQGNLDC-----AFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
             V NALI MY   GN        A  VF+    +D+I+W +L++  A  G        F
Sbjct: 197 TTVCNALISMY---GNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLF 253

Query: 426 -----SDMRISGICPDH----VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
                 D  I     +H    ++ ++ LS+C+   VL+   QV A  LKSG  S L V +
Sbjct: 254 MAMLHDDSAIELRPNEHTFGSLITATSLSSCSS-GVLD---QVFARVLKSGSSSDLYVGS 309

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           +LV  +A+ G +++A  +F ++  R+ +T   LI+G  +    +EA+  +      GT+ 
Sbjct: 310 ALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIF-----MGTRD 364

Query: 537 DYI----TFVGLLFACSHAGLAENA 557
            ++    TFV LL A +   + E+ 
Sbjct: 365 SFVVNTDTFVVLLSAVAEFSIPEDG 389



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 123/256 (48%), Gaps = 23/256 (8%)

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           + +H  +VK G     F++N L+++YAK   L  A  VF+ M +++ +SWT L++G    
Sbjct: 76  ERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLS 135

Query: 416 GSYEEALKYFSDMRISG---ICPDHVVVSSILSAC--AELTVLEFGQQVHAVFLKSGGCS 470
           G  +EA + F  M   G     P      S+L AC  A   +L F  QVH +  K+   S
Sbjct: 136 GITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYAS 195

Query: 471 SLSVDNSLVLVYAKC--GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
           + +V N+L+ +Y  C  G    A +VFD+   RD+ITW AL+   A+ G        +  
Sbjct: 196 NTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMA 255

Query: 529 ML----ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPG--PDHY--A 578
           ML    A   +P+  TF  L+ A S +  +         +D+V+   +K G   D Y  +
Sbjct: 256 MLHDDSAIELRPNEHTFGSLITATSLSSCSSGV------LDQVFARVLKSGSSSDLYVGS 309

Query: 579 CMIDLLGRSGKLIEAK 594
            ++    R G L EAK
Sbjct: 310 ALVSAFARHGMLDEAK 325



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 74/180 (41%), Gaps = 40/180 (22%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           AL+D +S  G ID A ++F  MS ++ F+WN+MI+ YA                      
Sbjct: 720 ALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYA---------------------- 757

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG----EQFH 156
                     +GL  +A E+F +MQ  G  P   T  +VL  CS  GL+ RG    E   
Sbjct: 758 ---------RHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFEMME 808

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
            + I    +  + V    +D+  +   + + +      P   N + W T++    Q+  G
Sbjct: 809 DHGILPHIEHYSCV----IDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKDG 864


>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 249/662 (37%), Positives = 395/662 (59%), Gaps = 2/662 (0%)

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
           L+  +Q H   I +    N F+   L++ Y  C  + +A+ +F   P  KN V+WT +I+
Sbjct: 37  LKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPY-KNVVSWTILIS 95

Query: 209 GYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEA 268
           G ++N    +AI+ FR+M +   + N  T  S+L A A +        VH   +  GFE 
Sbjct: 96  GLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEG 155

Query: 269 NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH 328
           NV+V++AL+DMY+K G +  AR+L E     N V+WN+++ G++  GF +EA+ LF  M 
Sbjct: 156 NVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMR 215

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD 388
            + + +D +T  S++    S   L     +H  I++TG+E  K +  AL+D+Y     +D
Sbjct: 216 RKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVD 275

Query: 389 CAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR-ISGICPDHVVVSSILSAC 447
            A  VF+ M  KDV +WT ++TG +    ++ A+K+F+ M  I  +  D + +  ILS+C
Sbjct: 276 DAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSC 335

Query: 448 AELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWT 507
           +    L+ G++VHA+ +K+   +++ V ++++ +YA CG + DA R F  M  +DV+ W 
Sbjct: 336 SHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWN 395

Query: 508 ALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKV 567
           A+I G   NG G +A+  + QM   G  PD  TFV +L+ACSHAG+       F  M K 
Sbjct: 396 AMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKT 455

Query: 568 YGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGER 627
             + P   HYAC+ID+LGR+G+L  A + ++ M  +PD  V+  LL ACR+HG+++LG  
Sbjct: 456 SHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHE 515

Query: 628 AANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVH 687
            +  +FE+EP +A  YV LSNMY+ AG WE     R  ++S+ ++K+PG S +E N +++
Sbjct: 516 ISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEINQEIY 575

Query: 688 IFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAV 747
            F++ ++ HP    I   +  ++L IK+AGYVP+ N  L +V ++ K+  L +HSEK+A+
Sbjct: 576 TFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKKDILYHHSEKMAI 635

Query: 748 AFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGD 807
           AFGL+       IRI KNLR C DCHTA K++S V+ R ++++D+NRFH F+ G CSC D
Sbjct: 636 AFGLMRTKPETIIRITKNLRTCDDCHTASKFVSKVFGRVLVIKDANRFHVFQDGVCSCRD 695

Query: 808 YW 809
           YW
Sbjct: 696 YW 697



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 142/498 (28%), Positives = 260/498 (52%), Gaps = 6/498 (1%)

Query: 26  THNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLRE 85
           T  +    +P + + R L D     +I    Q+       + F  N+++ AY   G L +
Sbjct: 17  TQRLSPLAQPHASILRKLKDLKPLQQIH--AQIITSGLTHNTFLSNSLMNAYVYCGLLAD 74

Query: 86  AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL 145
           AK++F+ TP+KN  +W+ LI G +     +EA ++F +M +  ++P+  T+ +VL   + 
Sbjct: 75  AKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFAN 134

Query: 146 KGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTT 205
            GL++  +  H + ++  F+ N FV T LVDMY+K  C+  A  LF+   + +N V W  
Sbjct: 135 LGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSE-RNVVTWNA 193

Query: 206 MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
           +++GYS +G+  +AI+ F  MR +G+  + +T  S++ A  +V     G  +HG I+ +G
Sbjct: 194 IVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTG 253

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
           +E + ++++AL+D+Y     +D A R+     + +  +W  M+ GF+       A+  F 
Sbjct: 254 YENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFN 313

Query: 326 KMHA-RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
           KM   +++K+D      +L+  + +  L   + VH+L +KT F    FV +A+IDMYA  
Sbjct: 314 KMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANC 373

Query: 385 GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
           GNL+ A   F  M +KDV+ W ++I G   +G   +A+  F  M+ SG+ PD     S+L
Sbjct: 374 GNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVL 433

Query: 445 SACAELTVLEFGQQVHAVFLKSGGC-SSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-D 502
            AC+   ++  G Q+    +K+     +L     ++ +  + G ++ A    ++M  + D
Sbjct: 434 YACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPD 493

Query: 503 VITWTALIMGCAQNGKGK 520
              ++ L+  C  +G  K
Sbjct: 494 FDVYSTLLGACRIHGNIK 511



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 170/354 (48%), Gaps = 51/354 (14%)

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           DL   + +H+ I+ +G     F++N+L++ Y   G L  A  +F+    K+V+SWT LI+
Sbjct: 36  DLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILIS 95

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
           G A +  + EA+  F +M +    P+ V +SS+L A A L ++   + VH  +++ G   
Sbjct: 96  GLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEG 155

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
           ++ V+ +LV +Y+K GC+  A ++F+SM  R+V+TW A++ G + +G  +EA+  ++ M 
Sbjct: 156 NVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMR 215

Query: 531 ARGTKPDYITFVGLLFA-----CSHAGLAENA---RWYFES--------MD--------- 565
            +G   D+ T + L+ A     C   G   +    R  +E+        MD         
Sbjct: 216 RKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVD 275

Query: 566 ---KVYGIKPGPDHYACMIDLLGRSGKLIEAKAL--LDQMVG----EPDATVWKALLSAC 616
              +V+      D  A  + L G S      +A+   ++M+G    + D+     +LS+C
Sbjct: 276 DAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSC 335

Query: 617 RVHGDLELGERA---------ANNLFELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
              G L+ G R          ANN+F            + +MY+  G  EDA R
Sbjct: 336 SHSGALQQGRRVHALAIKTCFANNIFVGSA--------VIDMYANCGNLEDAKR 381


>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
          Length = 693

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 257/682 (37%), Positives = 393/682 (57%), Gaps = 5/682 (0%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P   T   +L+LC+ +  L  G   H           +   T L +MY KC+   +A  +
Sbjct: 14  PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE--GVESNQFTFPSILTACAAV 248
           F   P  ++ VAW  ++ GY++NG    A+E    M+ E  G   +  T  S+L ACA  
Sbjct: 74  FDRMP-SRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADA 132

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
            A     +VH   L +G +  V V +A++D Y KCG +++AR + +   + N VSWN+MI
Sbjct: 133 RALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMI 192

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
            G+A  G   EA++LF +M    + + D +  + L        L+  + VH L+V+ G  
Sbjct: 193 DGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLS 252

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV-ISWTSLITGCAYHGSYEEALKYFSD 427
               V NALI  YAK    D A  VFN + +K   ISW ++I G   +   E+A + F+ 
Sbjct: 253 SNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFAR 312

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           M++  + PD   + S++ A A+++     + +H   ++      + V  +L+ +Y+KCG 
Sbjct: 313 MQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGR 372

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           ++ A R+FDS   R VITW A+I G   +G G+ A++ +++M   G+ P+  TF+ +L A
Sbjct: 373 VSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAA 432

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
           CSHAGL +  + YF SM K YG++PG +HY  M+DLLGR+GKL EA + +  M  EP  +
Sbjct: 433 CSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGIS 492

Query: 608 VWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
           V+ A+L AC++H ++EL E +A  +FEL P   + +V L+N+Y+ A  W+D ARVR  M+
Sbjct: 493 VYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAME 552

Query: 668 SRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALH 727
            +G++K PG S ++  ++VH F S    H    DIY+++ +++  IK+ GYVPD + ++H
Sbjct: 553 KKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIKDMGYVPDTD-SIH 611

Query: 728 NVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHI 787
           +VE++ K   L  HSEKLA+A+GL+    G  I+I KNLRVC DCH A K IS +  R I
Sbjct: 612 DVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLLTGREI 671

Query: 788 ILRDSNRFHHFKAGNCSCGDYW 809
           I+RD  RFHHFK G CSCGDYW
Sbjct: 672 IMRDIQRFHHFKDGKCSCGDYW 693



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/455 (29%), Positives = 232/455 (50%), Gaps = 9/455 (1%)

Query: 82  RLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE--GYRPSQYTLDNV 139
           R  +A+++F+  P ++   W++++ GY+  GL   A E   +MQ E  G RP   TL +V
Sbjct: 66  RPADARRVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSV 125

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKN 199
           L  C+    L    + H +A++   D    V T ++D Y KC  +  A  +F   P  +N
Sbjct: 126 LPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMP-VRN 184

Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG 259
            V+W  MI GY+ NG   +A+  F  M  EGV+    +  + L AC  +   D   +VH 
Sbjct: 185 SVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHE 244

Query: 260 CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE---VSWNSMIVGFARQGF 316
            ++  G  +NV V +ALI  YAKC   D A ++  ++E+ N+   +SWN+MI+GF +   
Sbjct: 245 LLVRVGLSSNVSVTNALITTYAKCKRADLAAQV--FNELGNKKTRISWNAMILGFTQNEC 302

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
            ++A  LF +M   +++ D FT  SV+   A   D   A+ +H   ++   +   +V  A
Sbjct: 303 PEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTA 362

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           LIDMY+K G +  A  +F+  +D+ VI+W ++I G   HG  + A++ F +M+ +G  P+
Sbjct: 363 LIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPN 422

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVF 495
                S+L+AC+   +++ GQ+  A   K  G    +    ++V +  + G +++A    
Sbjct: 423 ETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFI 482

Query: 496 DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
            +M     I+    ++G  +  K  E  +   Q++
Sbjct: 483 KNMPIEPGISVYGAMLGACKLHKNVELAEESAQII 517



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 173/353 (49%), Gaps = 2/353 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
             ++ AY   G +  A+ +F+  P +N  +W+++I GY++ G   EA  LFW+M  EG  
Sbjct: 158 TAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVD 217

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            +  ++   L+ C   G L    + H   ++     N  V   L+  YAKCK    A  +
Sbjct: 218 VTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQV 277

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F    + K  ++W  MI G++QN     A   F  M++E V  + FT  S++ A A +S 
Sbjct: 278 FNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISD 337

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
                 +HG  +    + +VYV +ALIDMY+KCG +  ARRL + +   + ++WN+MI G
Sbjct: 338 PLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHG 397

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTGFEG 369
           +   GF + A+ LF++M       ++ T+ SVL  C  + +     K   S+    G E 
Sbjct: 398 YGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEP 457

Query: 370 YKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
                  ++D+  + G LD A+  + N+  +  +  + +++  C  H + E A
Sbjct: 458 GMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELA 510



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 71/134 (52%), Gaps = 3/134 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D+D +    +I  Y+  GR+  A++LF+    ++  TW+++I+GY ++G    A ELF +
Sbjct: 354 DQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEE 413

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV--VTGLVDMYAKC 181
           M+  G  P++ T  +VL  CS  GL+  G+++   ++K  + L   +     +VD+  + 
Sbjct: 414 MKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFA-SMKKDYGLEPGMEHYGTMVDLLGRA 472

Query: 182 KCIFEAEYLFKMFP 195
             + EA    K  P
Sbjct: 473 GKLDEAWSFIKNMP 486


>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 282/771 (36%), Positives = 409/771 (53%), Gaps = 88/771 (11%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  +S  G+I++A  +F++M D++  +WN+++A Y  + R +EA+ +F++   +N  
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTI 161

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           +W+ L+ GY N G+  EA E+F +M                                   
Sbjct: 162 SWNGLVSGYINNGMINEAREVFDRMP---------------------------------- 187

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
                + N    T +V  Y K   I EAE LF   P+ KN V+WT M+ G  Q G   +A
Sbjct: 188 -----ERNVVSWTAMVRGYVKEGMISEAETLFWQMPE-KNVVSWTVMLGGLLQEGRIDEA 241

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
              F  M  + V +              V AR         +       NV   + +I  
Sbjct: 242 CRLFDMMPEKDVVTRTNMIGGYCQVGRLVEAR--------MLFDEMPRRNVVSWTTMITG 293

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           Y +   +D AR+L E     NEVSW +M+ G+   G   EA  LF  M  +         
Sbjct: 294 YVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIK--------- 344

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
            SV+ C                             NA+I  + + G +  A  VF+ M++
Sbjct: 345 -SVVAC-----------------------------NAMILCFGQNGEVPKARQVFDQMRE 374

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           KD  +W+++I      G   +AL+ F  M+  GI P+   + S+LS CA L  L+ G+++
Sbjct: 375 KDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREI 434

Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKG 519
           HA  ++S     + V + L+ +Y KCG +  A +VFD    +DV+ W ++I G AQ+G G
Sbjct: 435 HAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLG 494

Query: 520 KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC 579
            EAL+ +  M   G  PD +TFVG+L ACS+ G  +     F SM+  Y ++   +HYAC
Sbjct: 495 VEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYAC 554

Query: 580 MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMN 639
           M+DLLGR+GKL EA  L+++M  E DA +W ALL ACR H  L+L E AA  L  LEP N
Sbjct: 555 MVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKN 614

Query: 640 AMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISED-RGHPL 698
           A P++ LSN+Y++ G+W+D A +R+ M+ R + K PGCSW+    +VH F   D  GHP 
Sbjct: 615 AGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPE 674

Query: 699 RTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA 758
            ++I   ++ +  L++EAGY PD +F LH+V+EE K   L YHSEKLAVA+GLL +P G 
Sbjct: 675 HSEINRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGM 734

Query: 759 PIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           PIR+ KNLRVCGDCH A+K I+ V  R IILRD+NRFHHFK G+CSC DYW
Sbjct: 735 PIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 138/278 (49%), Gaps = 34/278 (12%)

Query: 33  VKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE 92
           +K     N  ++ F  +GE+ +A Q+F++M ++D  TW+ MI  Y               
Sbjct: 343 IKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERK------------ 390

Query: 93  TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
                              GL+++A ELF  MQ EG RP+  +L +VL +C+    L  G
Sbjct: 391 -------------------GLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHG 431

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
            + H   +++ FDL+ +V + L+ MY KC  + +A+ +F  F   K+ V W ++ITGY+Q
Sbjct: 432 REIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFA-VKDVVMWNSIITGYAQ 490

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVY 271
           +G G +A+  F DM   G+  +  TF  +L+AC+       G ++   + +    E  + 
Sbjct: 491 HGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIE 550

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
             + ++D+  + G L+ A  L+E   ++ + + W +++
Sbjct: 551 HYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALL 588



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/354 (23%), Positives = 161/354 (45%), Gaps = 62/354 (17%)

Query: 273 QSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI 332
           +++LI  Y++ G ++ AR + +     N +SWNS++ G+ +    +EA ++F KM  R+ 
Sbjct: 101 RNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERNT 160

Query: 333 KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM 392
                ++  +++ + +N  +N A+ V   + +     +     A++  Y K+G +  A  
Sbjct: 161 ----ISWNGLVSGYINNGMINEAREVFDRMPERNVVSW----TAMVRGYVKEGMISEAET 212

Query: 393 VFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV 452
           +F  M +K+V+SWT ++ G    G  +EA + F  M      P+  VV+           
Sbjct: 213 LFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMM------PEKDVVTR---------- 256

Query: 453 LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMG 512
                                   +++  Y + G + +A  +FD M  R+V++WT +I G
Sbjct: 257 -----------------------TNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITG 293

Query: 513 CAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKP 572
             QN +   A + ++ M     + + +++  +L   ++ G  + A   F +M       P
Sbjct: 294 YVQNQQVDIARKLFEVM----PEKNEVSWTAMLKGYTNCGRLDEASELFNAM-------P 342

Query: 573 GPDHYAC--MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLEL 624
                AC  MI   G++G++ +A+ + DQM  E D   W A++      G LEL
Sbjct: 343 IKSVVACNAMILCFGQNGEVPKARQVFDQM-REKDEGTWSAMIKVYERKG-LEL 394



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 120/273 (43%), Gaps = 27/273 (9%)

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
           +IS  SLIT  +  G  E+A   F +MR   I   + +V+            +  Q+   
Sbjct: 98  IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQN-------KRPQEAQN 150

Query: 462 VFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKE 521
           +F K    +++S  N LV  Y   G IN+A  VFD M  R+V++WTA++ G  + G   E
Sbjct: 151 MFDKMSERNTISW-NGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISE 209

Query: 522 ALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD--HYAC 579
           A   + QM  +      +   GLL      G  + A   F+ M       P  D      
Sbjct: 210 AETLFWQMPEKNVVSWTVMLGGLL----QEGRIDEACRLFDMM-------PEKDVVTRTN 258

Query: 580 MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEP-M 638
           MI    + G+L+EA+ L D+M    +   W  +++    +  +++    A  LFE+ P  
Sbjct: 259 MIGGYCQVGRLVEARMLFDEM-PRRNVVSWTTMITGYVQNQQVDI----ARKLFEVMPEK 313

Query: 639 NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
           N + +  +   Y+  G+ ++A+ +   M  + +
Sbjct: 314 NEVSWTAMLKGYTNCGRLDEASELFNAMPIKSV 346



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 20/207 (9%)

Query: 469 CSSLSVD-NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYD 527
           CS+  +  NSL+  Y++ G I  A  VFD M  +++I+W +++ G  QN + +EA   +D
Sbjct: 94  CSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFD 153

Query: 528 QMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRS 587
           +M  R T    I++ GL+    + G+   AR  F+ M +   +      +  M+    + 
Sbjct: 154 KMSERNT----ISWNGLVSGYINNGMINEAREVFDRMPERNVVS-----WTAMVRGYVKE 204

Query: 588 GKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLS 647
           G + EA+ L  QM  E +   W  +L      G ++     A  LF++ P   +  V  +
Sbjct: 205 GMISEAETLFWQM-PEKNVVSWTVMLGGLLQEGRID----EACRLFDMMPEKDV--VTRT 257

Query: 648 NM---YSTAGKWEDAARVRKLMKSRGI 671
           NM   Y   G+  +A  +   M  R +
Sbjct: 258 NMIGGYCQVGRLVEARMLFDEMPRRNV 284


>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 282/771 (36%), Positives = 409/771 (53%), Gaps = 88/771 (11%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  +S  G+I++A  +F++M D++  +WN+++A Y  + R +EA+ +F++   +N  
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTI 161

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           +W+ L+ GY N G+  EA E+F +M                                   
Sbjct: 162 SWNGLVSGYINNGMINEAREVFDRMP---------------------------------- 187

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
                + N    T +V  Y K   I EAE LF   P+ KN V+WT M+ G  Q G   +A
Sbjct: 188 -----ERNVVSWTAMVRGYVKEGMISEAETLFWQMPE-KNVVSWTVMLGGLLQEGRIDEA 241

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
              F  M  + V +              V AR         +       NV   + +I  
Sbjct: 242 CRLFDMMPEKDVVTRTNMIGGYCQVGRLVEAR--------MLFDEMPRRNVVSWTTMITG 293

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           Y +   +D AR+L E     NEVSW +M+ G+   G   EA  LF  M  +         
Sbjct: 294 YVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIK--------- 344

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
            SV+ C                             NA+I  + + G +  A  VF+ M++
Sbjct: 345 -SVVAC-----------------------------NAMILCFGQNGEVPKARQVFDQMRE 374

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           KD  +W+++I      G   +AL+ F  M+  GI P+   + S+LS CA L  L+ G+++
Sbjct: 375 KDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREI 434

Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKG 519
           HA  ++S     + V + L+ +Y KCG +  A +VFD    +DV+ W ++I G AQ+G G
Sbjct: 435 HAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLG 494

Query: 520 KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC 579
            EAL+ +  M   G  PD +TFVG+L ACS+ G  +     F SM+  Y ++   +HYAC
Sbjct: 495 VEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYAC 554

Query: 580 MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMN 639
           M+DLLGR+GKL EA  L+++M  E DA +W ALL ACR H  L+L E AA  L  LEP N
Sbjct: 555 MVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKN 614

Query: 640 AMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISED-RGHPL 698
           A P++ LSN+Y++ G+W+D A +R+ M+ R + K PGCSW+    +VH F   D  GHP 
Sbjct: 615 AGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPE 674

Query: 699 RTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA 758
            ++I   ++ +  L++EAGY PD +F LH+V+EE K   L YHSEKLAVA+GLL +P G 
Sbjct: 675 HSEINRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGM 734

Query: 759 PIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           PIR+ KNLRVCGDCH A+K I+ V  R IILRD+NRFHHFK G+CSC DYW
Sbjct: 735 PIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 138/278 (49%), Gaps = 34/278 (12%)

Query: 33  VKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE 92
           +K     N  ++ F  +GE+ +A Q+F++M ++D  TW+ MI  Y               
Sbjct: 343 IKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERK------------ 390

Query: 93  TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
                              GL+++A ELF  MQ EG RP+  +L +VL +C+    L  G
Sbjct: 391 -------------------GLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHG 431

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
            + H   +++ FDL+ +V + L+ MY KC  + +A+ +F  F   K+ V W ++ITGY+Q
Sbjct: 432 REIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFA-VKDVVMWNSIITGYAQ 490

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVY 271
           +G G +A+  F DM   G+  +  TF  +L+AC+       G ++   + +    E  + 
Sbjct: 491 HGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIE 550

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
             + ++D+  + G L+ A  L+E   ++ + + W +++
Sbjct: 551 HYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALL 588



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/354 (23%), Positives = 161/354 (45%), Gaps = 62/354 (17%)

Query: 273 QSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI 332
           +++LI  Y++ G ++ AR + +     N +SWNS++ G+ +    +EA ++F KM  R+ 
Sbjct: 101 RNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERNT 160

Query: 333 KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM 392
                ++  +++ + +N  +N A+ V   + +     +     A++  Y K+G +  A  
Sbjct: 161 ----ISWNGLVSGYINNGMINEAREVFDRMPERNVVSW----TAMVRGYVKEGMISEAET 212

Query: 393 VFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV 452
           +F  M +K+V+SWT ++ G    G  +EA + F  M      P+  VV+           
Sbjct: 213 LFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMM------PEKDVVTR---------- 256

Query: 453 LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMG 512
                                   +++  Y + G + +A  +FD M  R+V++WT +I G
Sbjct: 257 -----------------------TNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITG 293

Query: 513 CAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKP 572
             QN +   A + ++ M     + + +++  +L   ++ G  + A   F +M       P
Sbjct: 294 YVQNQQVDIARKLFEVM----PEKNEVSWTAMLKGYTNCGRLDEASELFNAM-------P 342

Query: 573 GPDHYAC--MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLEL 624
                AC  MI   G++G++ +A+ + DQM  E D   W A++      G LEL
Sbjct: 343 IKSVVACNAMILCFGQNGEVPKARQVFDQM-REKDEGTWSAMIKVYERKG-LEL 394



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 120/273 (43%), Gaps = 27/273 (9%)

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
           +IS  SLIT  +  G  E+A   F +MR   I   + +V+            +  Q+   
Sbjct: 98  IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQN-------KRPQEAQN 150

Query: 462 VFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKE 521
           +F K    +++S  N LV  Y   G IN+A  VFD M  R+V++WTA++ G  + G   E
Sbjct: 151 MFDKMSERNTISW-NGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISE 209

Query: 522 ALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD--HYAC 579
           A   + QM  +      +   GLL      G  + A   F+ M       P  D      
Sbjct: 210 AETLFWQMPEKNVVSWTVMLGGLL----QEGRIDEACRLFDMM-------PEKDVVTRTN 258

Query: 580 MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEP-M 638
           MI    + G+L+EA+ L D+M    +   W  +++    +  +++    A  LFE+ P  
Sbjct: 259 MIGGYCQVGRLVEARMLFDEM-PRRNVVSWTTMITGYVQNQQVDI----ARKLFEVMPEK 313

Query: 639 NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
           N + +  +   Y+  G+ ++A+ +   M  + +
Sbjct: 314 NEVSWTAMLKGYTNCGRLDEASELFNAMPIKSV 346



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 20/207 (9%)

Query: 469 CSSLSVD-NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYD 527
           CS+  +  NSL+  Y++ G I  A  VFD M  +++I+W +++ G  QN + +EA   +D
Sbjct: 94  CSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFD 153

Query: 528 QMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRS 587
           +M  R T    I++ GL+    + G+   AR  F+ M +   +      +  M+    + 
Sbjct: 154 KMSERNT----ISWNGLVSGYINNGMINEAREVFDRMPERNVVS-----WTAMVRGYVKE 204

Query: 588 GKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLS 647
           G + EA+ L  QM  E +   W  +L      G ++     A  LF++ P   +  V  +
Sbjct: 205 GMISEAETLFWQM-PEKNVVSWTVMLGGLLQEGRID----EACRLFDMMPEKDV--VTRT 257

Query: 648 NM---YSTAGKWEDAARVRKLMKSRGI 671
           NM   Y   G+  +A  +   M  R +
Sbjct: 258 NMIGGYCQVGRLVEARMLFDEMPRRNV 284


>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
 gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 240/572 (41%), Positives = 369/572 (64%), Gaps = 3/572 (0%)

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
           ++L  C  ++  + G  +H  +L+S F  ++ +Q+ L+++YAKCGDL  AR+L +     
Sbjct: 20  TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS--NIDLNNAKS 357
           + V+W ++I G+++    ++AL L  +M    +K + FT  S+L   +   + D+   + 
Sbjct: 80  DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           +H L ++ G++   +V+ A++DMYA+  +L+ A ++F++M  K+ +SW +LI G A  G 
Sbjct: 140 LHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQ 199

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
            ++A   FS+M    + P H   SS+L ACA +  LE G+ VHA+ +K G      V N+
Sbjct: 200 GDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNT 259

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
           L+ +YAK G I DA +VFD +  RDV++W +++ G +Q+G GK ALQ +++ML     P+
Sbjct: 260 LLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPN 319

Query: 538 YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALL 597
            ITF+ +L ACSHAGL +  R YF+ M K Y ++P   HY  M+DLLGR+G L  A   +
Sbjct: 320 DITFLCVLTACSHAGLLDEGRHYFDMMKK-YNVEPQISHYVTMVDLLGRAGHLDRAIQFI 378

Query: 598 DQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWE 657
            +M  +P A VW ALL ACR+H ++ELG  AA  +FEL+      +V L N+Y+ AG+W 
Sbjct: 379 SEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWN 438

Query: 658 DAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAG 717
           DAA+VRK+MK  G++KEP CSWVE  ++VH+F+++D  HP R +I++  ++I   IKE G
Sbjct: 439 DAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIKEIG 498

Query: 718 YVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMK 777
           YVPD +  L  ++++ +E  L YHSEKLA+AF LL  P G+ IRI KN+R+CGDCH+A K
Sbjct: 499 YVPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCHSAFK 558

Query: 778 YISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           ++S +  R II+RD+NRFHHF  G CSC DYW
Sbjct: 559 FVSKLVEREIIVRDTNRFHHFCDGACSCEDYW 590



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/379 (33%), Positives = 206/379 (54%), Gaps = 4/379 (1%)

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
            +L+ C+    L  G+  H   + + F  +  +   L+++YAKC  +  A  LF      
Sbjct: 20  TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEM-SS 78

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDF--GA 255
           ++ V WT +ITGYSQ+     A+    +M   G++ NQFT  S+L A + V + D   G 
Sbjct: 79  RDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGR 138

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           Q+HG  L  G+++NVYV  A++DMYA+C  L+ A+ + +     NEVSWN++I G+AR+G
Sbjct: 139 QLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKG 198

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
              +A  LF  M   ++K   FTY SVL   AS   L   K VH+L++K G +   FV N
Sbjct: 199 QGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGN 258

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
            L+DMYAK G+++ A  VF+ +  +DV+SW S++TG + HG  + AL+ F +M  + I P
Sbjct: 259 TLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAP 318

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           + +    +L+AC+   +L+ G+    +  K      +S   ++V +  + G ++ A +  
Sbjct: 319 NDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFI 378

Query: 496 DSMHTRDV-ITWTALIMGC 513
             M  +     W AL+  C
Sbjct: 379 SEMPIKPTAAVWGALLGAC 397



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 121/376 (32%), Positives = 200/376 (53%), Gaps = 7/376 (1%)

Query: 48  NSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYG 107
           N G+I  A  L  +  D D    NT++  YA  G L  A+KLF+E   ++  TW++LI G
Sbjct: 32  NEGKIIHALLLNSRFRD-DLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITG 90

Query: 108 YSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKG---LLQRGEQFHGYAIKTCF 164
           YS +    +A  L  +M   G +P+Q+TL ++L+  S  G   +LQ G Q HG  ++  +
Sbjct: 91  YSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQ-GRQLHGLCLRYGY 149

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
           D N +V   ++DMYA+C  + EA+ +F +    KN V+W  +I GY++ G G KA   F 
Sbjct: 150 DSNVYVSCAILDMYARCHHLEEAQLIFDVMV-SKNEVSWNALIAGYARKGQGDKAFCLFS 208

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
           +M  E V+   FT+ S+L ACA++ + + G  VH  ++  G +   +V + L+DMYAK G
Sbjct: 209 NMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSG 268

Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
            ++ A+++ +     + VSWNSM+ G+++ G  K AL  F++M    I  +D T+  VL 
Sbjct: 269 SIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLT 328

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
             +    L+  +    ++ K   E        ++D+  + G+LD A    + M  K   +
Sbjct: 329 ACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAA 388

Query: 405 -WTSLITGCAYHGSYE 419
            W +L+  C  H + E
Sbjct: 389 VWGALLGACRMHKNME 404



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 118/269 (43%), Gaps = 36/269 (13%)

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
           +  ++L  C  L  L  G+ +HA+ L S     L + N+L+ +YAKCG +  A ++FD M
Sbjct: 17  ICHTLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEM 76

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENAR 558
            +RDV+TWTALI G +Q+ + ++AL    +ML  G KP+  T   LL A S  G  +  +
Sbjct: 77  SSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQ 136

Query: 559 -WYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG--------------- 602
                 +   YG          ++D+  R   L EA+ + D MV                
Sbjct: 137 GRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYAR 196

Query: 603 -------------------EPDATVWKALLSACRVHGDLELGERAANNLFEL-EPMNAMP 642
                              +P    + ++L AC   G LE G+     + +  E + A  
Sbjct: 197 KGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFV 256

Query: 643 YVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
              L +MY+ +G  EDA +V   +  R +
Sbjct: 257 GNTLLDMYAKSGSIEDAKKVFDRLAKRDV 285



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 104/276 (37%), Gaps = 78/276 (28%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  L  ++ SG I++A ++F++++ RD  +WN+M+                         
Sbjct: 258 NTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLT------------------------ 293

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
                  GYS +GL   A + F +M      P+  T   VL  CS  GLL  G  +    
Sbjct: 294 -------GYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHY---- 342

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
                           DM  K          + + P   ++V   TM+    + G+  +A
Sbjct: 343 ---------------FDMMKK----------YNVEPQISHYV---TMVDLLGRAGHLDRA 374

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVY---VQSAL 276
           I+   +M ++   +    + ++L AC      + G     CI    FE + +       L
Sbjct: 375 IQFISEMPIKPTAA---VWGALLGACRMHKNMELGGYAAECI----FELDSHYPGTHVLL 427

Query: 277 IDMYAKCG---DLDSARRLLEYSEIDNE--VSWNSM 307
            ++YA  G   D    R++++ S +  E   SW  M
Sbjct: 428 YNIYALAGRWNDAAKVRKMMKESGVKKEPACSWVEM 463


>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
 gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 741

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 268/702 (38%), Positives = 400/702 (56%), Gaps = 47/702 (6%)

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY--------LFKMFPDGKNH 200
           LQ     H   IK       + ++ L++      CI    +        +FK   +  N 
Sbjct: 46  LQSLRIIHAQMIKIGLHNTNYALSKLIEF-----CILSPHFEGLPYAISVFKTIQE-PNL 99

Query: 201 VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
           + W TM  G++ +     A++ +  M   G+  N +TFP +L +CA   A   G Q+HG 
Sbjct: 100 LIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGH 159

Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE----------------------- 297
           +L  G + ++YV ++LI MY + G L+ A ++ + S                        
Sbjct: 160 VLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENA 219

Query: 298 --------IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
                   + + VSWN+MI G+A  G +KEAL LFK M   +++ D+ T  +V++  A +
Sbjct: 220 QKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQS 279

Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
             +   + VH  I   GF     + NALID+Y+K G L+ A  +F  +  KDVISW +LI
Sbjct: 280 GSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLI 339

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK--SG 467
            G  +   Y+EAL  F +M  SG  P+ V + SIL ACA L  ++ G+ +H    K   G
Sbjct: 340 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKG 399

Query: 468 GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYD 527
             ++ S+  SL+ +YAKCG I  A++VF+S+  + + +W A+I G A +G+   +   + 
Sbjct: 400 VTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFS 459

Query: 528 QMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRS 587
           +M   G +PD ITFVGLL ACSH+G+ +  R  F +M + Y + P  +HY CMIDLLG S
Sbjct: 460 RMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHS 519

Query: 588 GKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLS 647
           G   EA+ +++ M  EPD  +W +LL AC++HG++ELGE  A NL ++EP N   YV LS
Sbjct: 520 GLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLS 579

Query: 648 NMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKID 707
           N+Y++AG+W + A+ R L+  +G++K PGCS +E +S VH FI  D+ HP   +IY  ++
Sbjct: 580 NIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLE 639

Query: 708 EIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLR 767
           E+ +L+++AG+VPD +  L  +EEE KE  L +HSEKLA+AFGL++   G  + I KNLR
Sbjct: 640 EMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLR 699

Query: 768 VCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           VC +CH A K IS +Y R II RD  RFHHF+ G CSC DYW
Sbjct: 700 VCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 204/409 (49%), Gaps = 32/409 (7%)

Query: 83  LREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRL 142
           L  A  +F      N   W+++  G++     + A +L+  M   G  P+ YT   VL+ 
Sbjct: 84  LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 143

Query: 143 CSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG----- 197
           C+     + G+Q HG+ +K   DL+ +V T L+ MY +   + +A  +F   P       
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY 203

Query: 198 -------------------------KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
                                    K+ V+W  MI+GY++ G   +A+E F+DM    V 
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
            ++ T  ++++ACA   + + G QVH  I   GF +N+ + +ALID+Y+KCG+L++A  L
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGL 323

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
            E     + +SWN++I G+     +KEAL LF++M       +D T  S+L   A    +
Sbjct: 324 FERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 383

Query: 353 NNAKSVHSLIVK--TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           +  + +H  I K   G      +  +LIDMYAK G+++ A  VFN +  K + SW ++I 
Sbjct: 384 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIF 443

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           G A HG  + +   FS MR  GI PD +    +LSAC+   +L+ G+ +
Sbjct: 444 GFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 222/446 (49%), Gaps = 23/446 (5%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +  +G +++A ++F+K   RD  ++  +I  YA+ G +  A+KLF+E P K+  +W+++I
Sbjct: 179 YVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMI 238

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            GY+  G   EA ELF  M     RP + T+  V+  C+  G ++ G Q H +     F 
Sbjct: 239 SGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFG 298

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            N  +V  L+D+Y+KC  +  A  LF+  P  K+ ++W T+I GY+      +A+  F++
Sbjct: 299 SNLKIVNALIDLYSKCGELETACGLFERLP-YKDVISWNTLIGGYTHMNLYKEALLLFQE 357

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS--SGFEANVYVQSALIDMYAKC 283
           M   G   N  T  SIL ACA + A D G  +H  I     G      ++++LIDMYAKC
Sbjct: 358 MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKC 417

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
           GD+++A ++       +  SWN+MI GFA  G    +  LF +M    I+ DD T+  +L
Sbjct: 418 GDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLL 477

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN-----ALIDMYAKQGNLD-CAFMVFNLM 397
           +  + +  L+  +     I +T  + YK          +ID+    G       M+  + 
Sbjct: 478 SACSHSGMLDLGRH----IFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMME 533

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDM-RISGICP-DHVVVSSILSACAELTVLEF 455
            + D + W SL+  C  HG+ E    +  ++ +I    P  +V++S+I ++      +  
Sbjct: 534 MEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEV-- 591

Query: 456 GQQVHAVFLKSG-----GCSSLSVDN 476
             +  A+    G     GCSS+ +D+
Sbjct: 592 -AKTRALLNDKGMKKVPGCSSIEIDS 616


>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
 gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
          Length = 635

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 236/573 (41%), Positives = 357/573 (62%), Gaps = 1/573 (0%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
            + SI+TACA          +H  +  S    + ++ ++LI MY KCG +  AR + +  
Sbjct: 64  VYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGI 123

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              + VSW  +I G+A+     EAL L   M     +   FT+ S L    +       +
Sbjct: 124 PTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGE 183

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H+L VK   +   +V +AL+DMYA+   +D A  VF+ +  K+ +SW +LI G A  G
Sbjct: 184 QMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKG 243

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
             E  L  F++M+ +G    H   SS+ SA A +  LE G+ VHA  +KSG   +  V N
Sbjct: 244 DGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVAN 303

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           +++ +YAK G + DA +VFD +  RD++TW  ++   AQ G GKEA+  ++++   G + 
Sbjct: 304 TILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQL 363

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           + ITF+ +L ACSH GL +  + YF+ M K Y ++P  DHY   +DLLGR+G L EA   
Sbjct: 364 NQITFLSVLTACSHGGLVKEGKQYFDMM-KDYNVEPEIDHYVSFVDLLGRAGLLKEALIF 422

Query: 597 LDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
           + +M  EP A VW ALL ACR+H + ++G+ AA+++FEL+P +  P V L N+Y++ G+W
Sbjct: 423 VFKMPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYASTGQW 482

Query: 657 EDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA 716
           +DAARVRK+MK+ G++KEP CSWVE  + VH+F+++D  HP   +IY   +E+   IK+A
Sbjct: 483 DDAARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVNTRIKKA 542

Query: 717 GYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAM 776
           GYVP+ ++ L +++E+ +E  L YHSEK+A+AF L+ +P GA IRI KN+R+CGDCH+A 
Sbjct: 543 GYVPNTDYVLLHIKEQERETKLQYHSEKIALAFALINMPAGATIRIMKNIRICGDCHSAF 602

Query: 777 KYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +Y+S V+ R I++RD+NRFHHF  G+CSCGDYW
Sbjct: 603 RYVSEVFKREIVVRDTNRFHHFSNGSCSCGDYW 635



 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 198/391 (50%), Gaps = 2/391 (0%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+     +++  C+    L      H +  ++    + F++  L+ MY KC  + +A ++
Sbjct: 60  PTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHV 119

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P  ++ V+WT +ITGY+QN    +A+    DM       + FTF S L A  A   
Sbjct: 120 FDGIPT-RDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGG 178

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
           R  G Q+H   +    + +VYV SAL+DMYA+C  +D A R+ ++ +  NEVSWN++I G
Sbjct: 179 RGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAG 238

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           FAR+G  +  L  F +M         FTY SV +  A    L   + VH+ ++K+G +  
Sbjct: 239 FARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLT 298

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
            FV N ++ MYAK G++  A  VF+ +  +D+++W +++T  A +G  +EA+ +F ++R 
Sbjct: 299 AFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRK 358

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
            GI  + +   S+L+AC+   +++ G+Q   +         +    S V +  + G + +
Sbjct: 359 YGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDLLGRAGLLKE 418

Query: 491 A-NRVFDSMHTRDVITWTALIMGCAQNGKGK 520
           A   VF          W AL+  C  +   K
Sbjct: 419 ALIFVFKMPMEPTAAVWGALLGACRMHKNAK 449



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 179/351 (50%), Gaps = 2/351 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           DGF  N++I  Y   G + +A+ +F+  P ++  +W+ LI GY+   +  EA  L   M 
Sbjct: 96  DGFLLNSLIHMYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDML 155

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
              +RPS +T  + L+     G    GEQ H  A+K   D + +V + L+DMYA+C+ + 
Sbjct: 156 RARFRPSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMD 215

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A  +F    D KN V+W  +I G+++ G G   +  F +M+  G  +  FT+ S+ +A 
Sbjct: 216 MAIRVFDWL-DSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSAL 274

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A + A + G  VH  ++ SG +   +V + ++ MYAK G +  AR++ +  +  + V+WN
Sbjct: 275 ARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWN 334

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +M+  FA+ G  KEA++ F+++    I+++  T+ SVL   +    +   K    ++   
Sbjct: 335 TMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDY 394

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFM-VFNLMQDKDVISWTSLITGCAYH 415
             E       + +D+  + G L  A + VF +  +     W +L+  C  H
Sbjct: 395 NVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMH 445



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 146/307 (47%), Gaps = 5/307 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D +  + ++  YA   ++  A ++F+    KN  +W++LI G++  G        F +
Sbjct: 195 DEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFAE 254

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           MQ  G+  + +T  +V    +  G L++G   H + IK+   L AFV   ++ MYAK   
Sbjct: 255 MQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGS 314

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A  +F    D ++ V W TM+T ++Q G G +A+  F ++R  G++ NQ TF S+LT
Sbjct: 315 MVDARKVFDRV-DQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLT 373

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC+       G Q    +     E  +    + +D+  + G L  A   +    ++   +
Sbjct: 374 ACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAA 433

Query: 304 WNSMIVGFARQGFHKEA-LSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSL 361
               ++G  R   HK A +  +   H  ++  +D   P +L N +AS    ++A  V  +
Sbjct: 434 VWGALLGACR--MHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYASTGQWDDAARVRKM 491

Query: 362 IVKTGFE 368
           +  TG +
Sbjct: 492 MKATGVK 498



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 9/201 (4%)

Query: 427 DMRISG-ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
           D+ ++G + P   V  SI++ACA+   L   + +H+   +S       + NSL+ +Y KC
Sbjct: 51  DLLLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKC 110

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G ++DA  VFD + TRDV++WT LI G AQN    EAL     ML    +P   TF   L
Sbjct: 111 GAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFL 170

Query: 546 F---ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
               AC   G+ E       ++   Y +       + ++D+  R  ++  A  + D +  
Sbjct: 171 KAAGACGGRGIGEQ----MHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDS 226

Query: 603 EPDATVWKALLSACRVHGDLE 623
           + + + W AL++     GD E
Sbjct: 227 KNEVS-WNALIAGFARKGDGE 246



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 40/203 (19%)

Query: 11  FSLRCRSKIIGPARYTHNVGNSVKPASDL-----NRALVDFSNSGEIDEAGQLFEKMSDR 65
           FS   R   +   R+ H   + +K    L     N  L  ++ SG + +A ++F+++  R
Sbjct: 271 FSALARIGALEQGRWVH--AHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQR 328

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D  TWNTM+ A+A                                YGL  EA   F +++
Sbjct: 329 DLVTWNTMLTAFA-------------------------------QYGLGKEAVAHFEEIR 357

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G + +Q T  +VL  CS  GL++ G+Q+         +         VD+  +   + 
Sbjct: 358 KYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDLLGRAGLLK 417

Query: 186 EAE-YLFKMFPDGKNHVAWTTMI 207
           EA  ++FKM P       W  ++
Sbjct: 418 EALIFVFKM-PMEPTAAVWGALL 439


>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 694

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 244/643 (37%), Positives = 386/643 (60%), Gaps = 5/643 (0%)

Query: 171 VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVE 229
           +  LV +Y KC  +  A  LF   P  +N V+W  ++ GY   G   + +  F++M  ++
Sbjct: 53  LNSLVHLYVKCGQLGLARNLFDAMPL-RNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQ 111

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
               N++ F + L+AC+       G Q HG +   G   + YV+SAL+ MY++C  ++ A
Sbjct: 112 NACPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELA 171

Query: 290 RRLLEY---SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCF 346
            ++L+      +++  S+NS++      G  +EA+ + ++M    +  D  TY  V+   
Sbjct: 172 LQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLC 231

Query: 347 ASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWT 406
           A   DL     VH+ +++ G    +FV + LIDMY K G +  A  VF+ +Q+++V+ WT
Sbjct: 232 AQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWT 291

Query: 407 SLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
           +L+T    +G +EE+L  F+ M   G  P+    + +L+ACA +  L  G  +HA   K 
Sbjct: 292 ALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKL 351

Query: 467 GGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFY 526
           G  + + V N+L+ +Y+K G I+ +  VF  M  RD+ITW A+I G + +G GK+ALQ +
Sbjct: 352 GFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVF 411

Query: 527 DQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGR 586
             M++    P+Y+TF+G+L A SH GL +   +Y   + + + I+PG +HY CM+ LL R
Sbjct: 412 QDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSR 471

Query: 587 SGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQL 646
           +G L EA+  +     + D   W+ LL+AC VH + +LG R A ++ +++P +   Y  L
Sbjct: 472 AGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQMDPHDVGTYTLL 531

Query: 647 SNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKI 706
           SNMY+ A +W+    +RKLM+ R I+KEPG SW++  + +H+F+SE   HP    IY K+
Sbjct: 532 SNMYAKARRWDGVVTIRKLMRERNIKKEPGASWLDIRNDIHVFLSEGSNHPESIQIYKKV 591

Query: 707 DEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNL 766
            +++ LIK  GYVP++   LH+VE+E KE  L+YHSEKLA+A+GL+ +P  APIRI KNL
Sbjct: 592 QQLLALIKPLGYVPNIASVLHDVEDEQKEGYLSYHSEKLALAYGLMKIPSPAPIRIIKNL 651

Query: 767 RVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           R+C DCHTA+K IS V  R II+RD+NRFHHF+ G+C+C D+W
Sbjct: 652 RMCDDCHTAVKLISKVTNRLIIVRDANRFHHFRDGSCTCLDHW 694



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 234/450 (52%), Gaps = 9/450 (2%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM-QLEGY 129
           N+++  Y   G+L  A+ LF+  P +N  +W+ L+ GY + G  +E   LF  M  L+  
Sbjct: 54  NSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNA 113

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
            P++Y     L  CS  G ++ G Q HG   K     + +V + LV MY++C  +  A  
Sbjct: 114 CPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQ 173

Query: 190 LFKMFPDGKNHV----AWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +    P    HV    ++ +++    ++G G +A+E  R M  E V  +  T+  ++  C
Sbjct: 174 VLDTVPG--EHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLC 231

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A +     G +VH  +L  G   + +V S LIDMY KCG++ +AR + +  +  N V W 
Sbjct: 232 AQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWT 291

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +++  + + G+ +E+L+LF  M       +++T+  +LN  A    L +   +H+ + K 
Sbjct: 292 ALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKL 351

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           GF+ +  V NALI+MY+K G++D ++ VF  M  +D+I+W ++I G ++HG  ++AL+ F
Sbjct: 352 GFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVF 411

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAK 484
            DM  +  CP++V    +LSA + L +++ G       +++      L     +V + ++
Sbjct: 412 QDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSR 471

Query: 485 CGCINDANRVFDSMHTR-DVITWTALIMGC 513
            G +++A     +   + DV+ W  L+  C
Sbjct: 472 AGLLDEAENFMKTTQVKWDVVAWRTLLNAC 501



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 117/247 (47%), Gaps = 7/247 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  + +I  Y   G +  A+ +F+    +N   W++L+  Y   G   E+  LF  M 
Sbjct: 255 DEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMD 314

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            EG  P++YT   +L  C+    L+ G+  H    K  F  +  V   L++MY+K   I 
Sbjct: 315 REGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSID 374

Query: 186 EAEYLFKMFPDG--KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
            +   + +F D   ++ + W  MI GYS +G G +A++ F+DM       N  TF  +L+
Sbjct: 375 SS---YNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLS 431

Query: 244 ACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NE 301
           A + +     G      ++ +   E  +   + ++ + ++ G LD A   ++ +++  + 
Sbjct: 432 AYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKWDV 491

Query: 302 VSWNSMI 308
           V+W +++
Sbjct: 492 VAWRTLL 498



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 16/125 (12%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN------ETP 94
           AL++ +S SG ID +  +F  M  RD  TWN MI  Y++ G  ++A ++F       E P
Sbjct: 362 ALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECP 421

Query: 95  FKNFFTWSSLIYGYSNYGLDIEAF----ELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQ 150
             N+ T+  ++  YS+ GL  E F     L    ++E   P       ++ L S  GLL 
Sbjct: 422 --NYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIE---PGLEHYTCMVALLSRAGLLD 476

Query: 151 RGEQF 155
             E F
Sbjct: 477 EAENF 481


>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 722

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 261/720 (36%), Positives = 419/720 (58%), Gaps = 44/720 (6%)

Query: 133 QYTLDNVLRLCSLKGL--LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC---IFEA 187
           ++ L+N   LC L+     ++G Q H   I        F ++ L+  ++       +  +
Sbjct: 4   RFLLENPSSLCLLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHS 63

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV-ESNQFTFPSILTACA 246
             LF    D  N   W TMI GYS++    +AI  +  M  +G+   N FTFP +L +CA
Sbjct: 64  RLLFSQI-DCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCA 122

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            +S+ + G +VH  I+  GFE++++V++ALI +Y+  G+L+ AR L + S + + VS+N+
Sbjct: 123 RLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNT 182

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT- 365
           MI G+A     + AL LF +M    I  D+FT+ ++ +  +   + N  K +H+ + K  
Sbjct: 183 MIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNL 242

Query: 366 -GFEGYKFVNNALIDMYAKQG--------------------------------NLDCAFM 392
              +    + +A++DMYAK G                                 ++ A  
Sbjct: 243 RSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARK 302

Query: 393 VFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV 452
           +FN M ++DVISWT++I+G +  G   EAL+ F +M   GI PD V + ++LSACA L  
Sbjct: 303 LFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGA 362

Query: 453 LEFGQQVHAVFLKSGGCSSLSVDNSLVL-VYAKCGCINDANRVFDSM--HTRDVITWTAL 509
            + G++++  ++++G  +  ++  + V+ +YAKCG I+ A  +F  +  + +    + ++
Sbjct: 363 FDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSM 422

Query: 510 IMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG 569
           I G AQ+G G+ A+  + ++++ G KPD +TFVG+L AC H+GL E  +  FESM   YG
Sbjct: 423 IAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYG 482

Query: 570 IKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAA 629
           IKP  +HY CM+DLLGR G L EA  L+ +M  E ++ +W+ALLSACR HG++++GE A 
Sbjct: 483 IKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAG 542

Query: 630 NNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIF 689
             L E+E  +   YV LSN+ + A +WE+A +VRK+M+  GIRK PG S++E    +H F
Sbjct: 543 QKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRF 602

Query: 690 ISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAF 749
           ++ D+ HP   +I   + ++ + +K AGYVP+    + +++EE KE  ++YHSEKLA+AF
Sbjct: 603 VASDKSHPQGKEIELMLKDMAMRLKSAGYVPNTAQVMFDIDEEEKESVVSYHSEKLALAF 662

Query: 750 GLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           GL+       IRI KNLR+C DCH A K +S +Y R I +RD+ RFHHF+ G+CSC D+W
Sbjct: 663 GLMYCSPTDTIRIVKNLRICADCHKAFKLVSEIYGREITVRDTMRFHHFRNGSCSCMDFW 722



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 142/539 (26%), Positives = 256/539 (47%), Gaps = 57/539 (10%)

Query: 83  LREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR-PSQYTLDNVLR 141
           L  ++ LF++    N F W+++I GYS      EA  L+  M  +G   P+ +T   +L 
Sbjct: 60  LDHSRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLN 119

Query: 142 LCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHV 201
            C+    L+ G + H + IK  F+ + FV   L+ +Y+    +  A  LF      ++ V
Sbjct: 120 SCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDE-SLVRDLV 178

Query: 202 AWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI 261
           ++ TMI GY++      A+  F +M+  G+  ++FTF ++ + C+ ++  + G Q+H  +
Sbjct: 179 SYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQV 238

Query: 262 LSS--GFEANVYVQSALIDMYAK--------------------------------CGDLD 287
             +    ++N+ ++SA++DMYAK                                CG+++
Sbjct: 239 YKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEIN 298

Query: 288 SARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFA 347
            AR+L  +    + +SW +MI G+++ G   EAL LFK+M A  IK D+ T  +VL+  A
Sbjct: 299 VARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACA 358

Query: 348 SNIDLNNAKSVHSLIVKTG-FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD--KDVIS 404
                +  K ++   ++ G F     +  A++DMYAK G++D A  +F  +    K    
Sbjct: 359 RLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFV 418

Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV-HAVF 463
           + S+I G A HG  E A+  F ++  +G+ PD V    +L AC    ++E G+++  ++F
Sbjct: 419 FNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMF 478

Query: 464 LKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM-HTRDVITWTALIMGCAQNGK---- 518
              G    +     +V +  + GC+ +A  +   M    + + W AL+  C  +G     
Sbjct: 479 NAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIG 538

Query: 519 ---GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
              G++ L+   Q  AR     Y+    +L   + A   E AR   + M+  +GI+  P
Sbjct: 539 EIAGQKLLEMEAQHGAR-----YVLLSNIL---ADANQWEEARQVRKVMED-HGIRKPP 588



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 192/392 (48%), Gaps = 38/392 (9%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           + D F  N +I  Y+  G L  A+ LF+E+  ++  +++++I GY+       A  LF +
Sbjct: 143 ESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGE 202

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT--CFDLNAFVVTGLVDMYAKC 181
           MQ  G  P ++T   +  +CS+      G+Q H    K     D N  + + +VDMYAKC
Sbjct: 203 MQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKC 262

Query: 182 KCIFEAEYLFKMFPDGK-------------------------NH------VAWTTMITGY 210
             I  AE +F      K                         NH      ++WT MI+GY
Sbjct: 263 GLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGY 322

Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG-FEAN 269
           SQ G   +A+E F++M   G++ ++ T  ++L+ACA + A D G +++   + +G F  N
Sbjct: 323 SQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQN 382

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEY--SEIDNEVSWNSMIVGFARQGFHKEALSLFKKM 327
             + +A++DMYAKCG +DSA  +       +     +NSMI G A+ G  + A+++F+++
Sbjct: 383 TILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFREL 442

Query: 328 HARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
            +  +K D+ T+  VL  C  S +     K   S+    G +        ++D+  + G 
Sbjct: 443 ISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGC 502

Query: 387 LDCAF-MVFNLMQDKDVISWTSLITGCAYHGS 417
           L+ A+ +V  +  + + + W +L++ C  HG+
Sbjct: 503 LEEAYDLVQKMPFEANSVIWRALLSACRTHGN 534



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 144/276 (52%), Gaps = 6/276 (2%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKM-SDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK 96
           L  A+VD ++  G I+ A ++F  M + +    W++M+  YA  G +  A+KLFN    +
Sbjct: 251 LKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHER 310

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ-F 155
           +  +W+++I GYS  G   EA ELF +M+  G +P + TL  VL  C+  G    G++ +
Sbjct: 311 DVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLY 370

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF-PDGKNHVAWTTMITGYSQNG 214
           H Y     F+ N  +   ++DMYAKC  I  A  +F+    + K    + +MI G +Q+G
Sbjct: 371 HQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHG 430

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQ 273
            G  AI  FR++   G++ ++ TF  +L AC      + G ++   + ++ G +  +   
Sbjct: 431 LGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHY 490

Query: 274 SALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
             ++D+  + G L+ A  L++    + N V W +++
Sbjct: 491 GCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALL 526


>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
 gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
          Length = 1108

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 268/758 (35%), Positives = 412/758 (54%), Gaps = 12/758 (1%)

Query: 56   GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK-NFFTWSSLIYGYSNYGLD 114
            G+++E    RD    N +I+ YA  G    A  +F    +K +  +W++++    +    
Sbjct: 359  GRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSF 418

Query: 115  IEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD-LNAFVVTG 173
             +    F  M L G  P++ +   +L  CS    L  G + H   +    D + + V T 
Sbjct: 419  GKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATM 478

Query: 174  LVDMYAKCKCIFEAEYLFKMFP-DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
            LV MY KC  I EAE +FK  P   ++ V W  M+  Y+QN    +A     +M   GV 
Sbjct: 479  LVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVL 538

Query: 233  SNQFTFPSILTACAAVSARDFGAQV-HGCILSSGFEANVYVQSALIDMYAKCGDLDSARR 291
             +  +F S+L++C         AQV   CIL SG+ +   +++ALI M+ +C +L+ AR 
Sbjct: 539  PDALSFTSVLSSCYCSQE----AQVLRMCILESGYRSAC-LETALISMHGRCRELEQARS 593

Query: 292  LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID 351
            + +  +  + VSW +M+   A     KE   LF++M    +  D FT  + L+    +  
Sbjct: 594  VFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTT 653

Query: 352  LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
            L   K +H+ + + G E    V NAL++MY+  G+   A   F  M+ +D++SW  +   
Sbjct: 654  LGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAA 713

Query: 412  CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
             A  G  +EA+  F  M++ G+ PD +  S+ L+      ++  G+  H +  +SG  S 
Sbjct: 714  YAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSD 773

Query: 472  LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
            +SV   LV +YAKCG +++A  +F       V+   A+I   AQ+G  +EA++ + +M  
Sbjct: 774  VSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQ 833

Query: 532  RGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLI 591
             G +PD  T V ++ AC HAG+ E     F +M + +GI P  +HYAC +DLLGR+G+L 
Sbjct: 834  EGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLE 893

Query: 592  EAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYS 651
             A+ ++ +M  E +  VW +LL  C++ GD ELGER A  + EL+P N+  +V LSN+Y 
Sbjct: 894  HAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYC 953

Query: 652  TAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIML 711
              GKW+DA   RK +  + ++  PG SW+E   QVH F++ DR HP   +IY  +D++ L
Sbjct: 954  ATGKWKDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDEIYVVLDKLEL 1013

Query: 712  LIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGD 771
            L++ AGY  D      + E+E KE  L YHSE++A+AFGL+  P    ++I KNLRVCGD
Sbjct: 1014 LMRRAGYEADKGL---DAEDELKEKALGYHSERIAIAFGLIATPPDTTLKIVKNLRVCGD 1070

Query: 772  CHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            CHTA KYIS +  R II+RDS RFHHF  G CSC D W
Sbjct: 1071 CHTATKYISMIMGREIIVRDSLRFHHFSNGTCSCKDCW 1108



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 156/591 (26%), Positives = 283/591 (47%), Gaps = 26/591 (4%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFK---NFFTWSSLIYGYSNYGLDIEAFELFW 122
           D    N +I  Y   G    A  +F     +   +  +W+++I      G   +A  +F 
Sbjct: 264 DPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFR 323

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGL-LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
           +++LEG RP+  TL  +L   +  G+      +FHG   ++ +  +  V   ++ MYAKC
Sbjct: 324 RLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKC 383

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF-KAIECFRDMRVEGVESNQFTFPS 240
                A  +F+      + ++W TM+ G S++   F K +  F  M + G++ N+ +F +
Sbjct: 384 GFFSAAWTVFRRIRWKCDVISWNTML-GASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIA 442

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSA----LIDMYAKCGDLDSARRLLEYS 296
           IL AC+   A DFG ++H  IL+   +   YV+S+    L+ MY KCG +  A  + +  
Sbjct: 443 ILNACSNSEALDFGRKIHSLILTRRRD---YVESSVATMLVSMYGKCGSIAEAELVFKEM 499

Query: 297 EIDNE--VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLN 353
            + +   V+WN M+  +A+    KEA     +M    +  D  ++ SVL +C+ S     
Sbjct: 500 PLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCS----Q 555

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
            A+ +   I+++G+     +  ALI M+ +   L+ A  VF+ M   DV+SWT++++  A
Sbjct: 556 EAQVLRMCILESGYRS-ACLETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATA 614

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
            +  ++E    F  M++ G+ PD   +++ L  C + T L  G+ +HA   + G  + ++
Sbjct: 615 ENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIA 674

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
           V+N+L+ +Y+ CG   +A   F++M  RD+++W  +    AQ G  KEA+  +  M   G
Sbjct: 675 VENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEG 734

Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
            KPD +TF   L     + L  + +  F  +    G+         ++ L  + GKL EA
Sbjct: 735 VKPDKLTFSTTLNVSGGSALVSDGK-LFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEA 793

Query: 594 KALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYV 644
            +L  +   +    +  A++ A   HG     E A    ++++     P V
Sbjct: 794 ISLF-RGACQWTVVLLNAIIGALAQHG---FSEEAVKMFWKMQQEGVRPDV 840



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 140/503 (27%), Positives = 235/503 (46%), Gaps = 25/503 (4%)

Query: 59  FEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSN-YGLDIEA 117
            E+ S       N MI  YA  G   +A  +F   P K+  +W+++   Y+       +A
Sbjct: 158 LERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQERRFYPDA 217

Query: 118 FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
             +F +M L+   P+  T    L  C+    L+ G   H    +     +      L++M
Sbjct: 218 LRIFREMLLQPLAPNVITFITALGACT---SLRDGTWLHSLLHEAGLGFDPLAGNALINM 274

Query: 178 YAKCKCIFEAEYLFKMFPDGK--NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           Y KC     A  +FK     +  + V+W  MI+   + G    A+  FR +R+EG+  N 
Sbjct: 275 YGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNS 334

Query: 236 FTFPSILTACAAVSARDFGA--QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA---- 289
            T  +IL A AA S  DFGA  + HG I  SG+  +V V +A+I MYAKCG   +A    
Sbjct: 335 VTLITILNALAA-SGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVF 393

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
           RR+    ++   +SWN+M+     +    + ++ F  M    I  +  ++ ++LN  +++
Sbjct: 394 RRIRWKCDV---ISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNS 450

Query: 350 IDLNNAKSVHSLIVKTGFEGY--KFVNNALIDMYAKQGNLDCAFMVFNLM--QDKDVISW 405
             L+  + +HSLI+ T    Y    V   L+ MY K G++  A +VF  M    + +++W
Sbjct: 451 EALDFGRKIHSLIL-TRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTW 509

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
             ++   A +   +EA     +M   G+ PD +  +S+LS+C      +  Q +    L+
Sbjct: 510 NVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC---YCSQEAQVLRMCILE 566

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
           S G  S  ++ +L+ ++ +C  +  A  VFD M   DV++WTA++   A+N   KE    
Sbjct: 567 S-GYRSACLETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHL 625

Query: 526 YDQMLARGTKPDYITFVGLLFAC 548
           + +M   G  PD  T    L  C
Sbjct: 626 FRRMQLEGVIPDKFTLATTLDTC 648



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 139/503 (27%), Positives = 246/503 (48%), Gaps = 44/503 (8%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           +L+ C     L +G++ H        + + F+   L++MY +C  + EA  +F    + +
Sbjct: 31  LLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEE-R 89

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVE-GVESNQFTFPSILTACAAVSARDFGAQV 257
           N V+WT +I+  +Q+G   +A   FR M +E     N +T  ++L ACA       G  +
Sbjct: 90  NVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSI 149

Query: 258 HGCILSSGFE----ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           H  I   G E        V +A+I+MYAKCG  + A  +       + VSW +M   +A+
Sbjct: 150 HAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQ 209

Query: 314 Q-GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
           +  F+ +AL +F++M  + +  +  T+ + L    S   L +   +HSL+ + G      
Sbjct: 210 ERRFYPDALRIFREMLLQPLAPNVITFITALGACTS---LRDGTWLHSLLHEAGLGFDPL 266

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLM---QDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
             NALI+MY K G+ + A+ VF  M   Q+ D++SW ++I+     G + +A+  F  +R
Sbjct: 267 AGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLR 326

Query: 430 ISGICPDHVVVSSILSACAELTVLEFG--QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           + G+ P+ V + +IL+A A   V +FG  ++ H    +SG    + V N+++ +YAKCG 
Sbjct: 327 LEGMRPNSVTLITILNALAASGV-DFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGF 385

Query: 488 INDANRVFDSMHTR-DVITWTALIMGCAQNGK--GKEALQFYDQMLARGTKPDYITFVGL 544
            + A  VF  +  + DVI+W  + +G +++ K  GK    F+  +LA G  P+ ++F+ +
Sbjct: 386 FSAAWTVFRRIRWKCDVISWNTM-LGASEDRKSFGKVVNTFHHMLLA-GIDPNKVSFIAI 443

Query: 545 LFACS-----------HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
           L ACS           H+ +    R Y ES                ++ + G+ G + EA
Sbjct: 444 LNACSNSEALDFGRKIHSLILTRRRDYVESSVATM-----------LVSMYGKCGSIAEA 492

Query: 594 KALLDQM-VGEPDATVWKALLSA 615
           + +  +M +       W  +L A
Sbjct: 493 ELVFKEMPLPSRSLVTWNVMLGA 515



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 173/325 (53%), Gaps = 12/325 (3%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           + ++L +C   +    G + H  I ++G E ++++ + LI+MY +CG L+ A  +    E
Sbjct: 28  YTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR-DIKIDDFTYPSVLNCFASNIDLNNAK 356
             N VSW ++I   A+ G    A +LF+ M        + +T  ++LN  A++ DL   +
Sbjct: 88  ERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147

Query: 357 SVHSLIVKTGFE----GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
           S+H++I + G E        V NA+I+MYAK G+ + A  VF  + +KDV+SWT++    
Sbjct: 148 SIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAY 207

Query: 413 AYHGS-YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
           A     Y +AL+ F +M +  + P+ +   + L AC   T L  G  +H++  ++G    
Sbjct: 208 AQERRFYPDALRIFREMLLQPLAPNVITFITALGAC---TSLRDGTWLHSLLHEAGLGFD 264

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTR---DVITWTALIMGCAQNGKGKEALQFYDQ 528
               N+L+ +Y KCG    A  VF +M +R   D+++W A+I    + G+  +A+  + +
Sbjct: 265 PLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRR 324

Query: 529 MLARGTKPDYITFVGLLFACSHAGL 553
           +   G +P+ +T + +L A + +G+
Sbjct: 325 LRLEGMRPNSVTLITILNALAASGV 349



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 169/344 (49%), Gaps = 21/344 (6%)

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
           D   D   Y ++L     + DL   K  H LI   G E + F+ N LI+MY + G+L+ A
Sbjct: 20  DRAADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEA 79

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI-SGICPDHVVVSSILSACAE 449
             +F+ M++++V+SWT+LI+  A  G++  A   F  M + S   P+   + ++L+ACA 
Sbjct: 80  HAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACAN 139

Query: 450 LTVLEFGQQVHAVFLKSG----GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
              L  G+ +HA+  + G      ++  V N+++ +YAKCG   DA  VF ++  +DV++
Sbjct: 140 SRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVS 199

Query: 506 WTALIMGCAQNGK-GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESM 564
           WTA+    AQ  +   +AL+ + +ML +   P+ ITF+  L AC+      +  W   S+
Sbjct: 200 WTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTS---LRDGTW-LHSL 255

Query: 565 DKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG--EPDATVWKALLSA---CRVH 619
               G+   P     +I++ G+ G    A  +   M    E D   W A++SA      H
Sbjct: 256 LHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRH 315

Query: 620 GDLELGERAANNLFELEPM--NAMPYVQLSNMYSTAGKWEDAAR 661
           GD      A      LE M  N++  + + N  + +G    AAR
Sbjct: 316 GD----AMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAAR 355



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 130/309 (42%), Gaps = 47/309 (15%)

Query: 17  SKIIGPARYTHNVGNSVKPASDL---NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTM 73
           S  +G  +  H     +   +D+   N  L  +SN G+  EA   FE M  RD  +WN M
Sbjct: 651 STTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIM 710

Query: 74  IAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQ 133
            AAYA +G  +EA  LF                                 MQLEG +P +
Sbjct: 711 SAAYAQAGLAKEAVLLFR-------------------------------HMQLEGVKPDK 739

Query: 134 YTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKM 193
            T    L +     L+  G+ FHG A ++  D +  V TGLV +YAKC  + EA  LF  
Sbjct: 740 LTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLF-- 797

Query: 194 FPDGKNHVAWTT-----MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
               +    WT      +I   +Q+G+  +A++ F  M+ EGV  +  T  SI++AC   
Sbjct: 798 ----RGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHA 853

Query: 249 SARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI-DNEVSWNS 306
              + G      +    G    +   +  +D+  + G L+ A +++      DN + W S
Sbjct: 854 GMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTS 913

Query: 307 MIVGFARQG 315
           ++     QG
Sbjct: 914 LLGTCKLQG 922


>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 258/653 (39%), Positives = 374/653 (57%), Gaps = 38/653 (5%)

Query: 161  KTCFD----LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
            K C D     N  +   L+  YA C   +   ++F   P  KN V +  MI  Y  N   
Sbjct: 1049 KICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPK-KNVVFFNVMIRSYVNNHLY 1107

Query: 217  FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
              A+  F++M   G++ + +T+P +L A +       G Q+H  ++  G + NV+V + L
Sbjct: 1108 SDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGL 1167

Query: 277  IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
            I MY KCG L  A R+L+     + VSWNS++ G AR G   +AL + K+M    +K D 
Sbjct: 1168 ISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDA 1227

Query: 337  FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
             T  S+L                  +  T  +   FV     +M+ K  N          
Sbjct: 1228 GTMASLLPA----------------VTNTCLDNVSFVK----EMFMKLAN---------- 1257

Query: 397  MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
               K ++SW  +I     +    EA+  F  M    + PD + ++S+L AC +L+ L  G
Sbjct: 1258 ---KSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLG 1314

Query: 457  QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
            +++H   ++     +L ++N+L+ +YAKCGC+  A  VFD M  RDV++WT++I     N
Sbjct: 1315 RRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMN 1374

Query: 517  GKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH 576
            GKG++A+  + +M   G  PD I FV +L ACSHAGL +  R+YF+ M +   I P  +H
Sbjct: 1375 GKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEH 1434

Query: 577  YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELE 636
            + CM+DLLGR+G++ EA   + QM  EP+  VW ALLSACRV+ ++ +G  AA+ LF+L 
Sbjct: 1435 FVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLC 1494

Query: 637  PMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGH 696
            P  +  YV LSN+Y+ AG+WED   VR +MK++GI+K PG S  E +++VH F++ D+ H
Sbjct: 1495 PEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSH 1554

Query: 697  PLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQ 756
            P    IY ++D ++  +KEAGYVP+ + ALH+VEEE KE  LA HSEKLA+AF +L    
Sbjct: 1555 PQSKQIYEELDVLVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAP 1614

Query: 757  GAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            G+PIRI KNLRVCGDCH A K IS +  R I +RD+NRFHHF  G CSCGDYW
Sbjct: 1615 GSPIRITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 1667



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 182/385 (47%), Gaps = 34/385 (8%)

Query: 73   MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
            ++ AYA  G     + +F+E P KN   ++ +I  Y N  L  +A  +F  M   G  P 
Sbjct: 1066 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 1125

Query: 133  QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
             YT   VL+  S    L  G Q H   ++   DLN FV  GL+ MY KC C+ EA  +  
Sbjct: 1126 HYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLD 1185

Query: 193  MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
              P  ++ V+W +++ G ++NG    A+E  ++M + G++ +  T  S+L A        
Sbjct: 1186 ZMP-CRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAV------- 1237

Query: 253  FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
                 + C+ +  F   ++++ A   +                      VSWN MI  + 
Sbjct: 1238 ----TNTCLDNVSFVKEMFMKLANKSL----------------------VSWNVMIAVYM 1271

Query: 313  RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
                  EA+ +F +M    +  D  +  SVL        L   + +H  +V+   +    
Sbjct: 1272 NNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLL 1331

Query: 373  VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
            + NALIDMYAK G L+ A  VF+ M+ +DV+SWTS+I+    +G   +A+  FS M+  G
Sbjct: 1332 LENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLG 1391

Query: 433  ICPDHVVVSSILSACAELTVLEFGQ 457
            + PD +   S+LSAC+   +L+ G+
Sbjct: 1392 LNPDSIAFVSVLSACSHAGLLDEGR 1416



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 165/355 (46%), Gaps = 44/355 (12%)

Query: 64   DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
            D + F  N +I+ Y   G L EA ++ +Z P ++  +W+SL+ G +  G   +A E+  +
Sbjct: 1158 DLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKE 1217

Query: 124  MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
            M+L G +P   T+ ++L   +                 TC D  +FV     +M+ K   
Sbjct: 1218 MELLGLKPDAGTMASLLPAVT----------------NTCLDNVSFV----KEMFMKLA- 1256

Query: 184  IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
                          K+ V+W  MI  Y  N    +A++ F  M    V+ +  +  S+L 
Sbjct: 1257 -------------NKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLP 1303

Query: 244  ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
            AC  +SA   G ++H  ++    + N+ +++ALIDMYAKCG L+ AR + +  +  + VS
Sbjct: 1304 ACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVS 1363

Query: 304  WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
            W SMI  +   G  ++A+SLF +M    +  D   + SVL+  +    L+  +    L+ 
Sbjct: 1364 WTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMT 1423

Query: 364  KTGFEGYKFVNN-----ALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGC 412
                E  K V        ++D+  + G +D A+  +  +  + +   W +L++ C
Sbjct: 1424 ----EECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSAC 1474



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 132/306 (43%), Gaps = 48/306 (15%)

Query: 46   FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREA------------------- 86
            +   G + EA ++ ++M  RD  +WN+++A  A +G+  +A                   
Sbjct: 1171 YGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTM 1230

Query: 87   ------------------KKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG 128
                              K++F +   K+  +W+ +I  Y N  +  EA ++F QM+   
Sbjct: 1231 ASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHA 1290

Query: 129  YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
              P   ++ +VL  C     L  G + H Y ++     N  +   L+DMYAKC C+  A 
Sbjct: 1291 VDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAR 1350

Query: 189  YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
             +F      ++ V+WT+MI+ Y  NG G  A+  F  M+  G+  +   F S+L+AC+  
Sbjct: 1351 EVFDQM-KFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHA 1409

Query: 249  SARD-----FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEV 302
               D     F      C +    E  V     ++D+  + G +D A   ++   ++ NE 
Sbjct: 1410 GLLDEGRYYFKLMTEECKIVPRIEHFV----CMVDLLGRAGQVDEAYGFIKQMPMEPNER 1465

Query: 303  SWNSMI 308
             W +++
Sbjct: 1466 VWGALL 1471


>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
 gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
          Length = 745

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 260/748 (34%), Positives = 415/748 (55%), Gaps = 7/748 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N +I  Y       +A+++F+    +N F+WS L+  Y    +  EA E++ +M 
Sbjct: 1   DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            +      YTL +VL  C+    ++ G      A +  F+ +  V T L+ ++AKC C+ 
Sbjct: 61  RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           EAE +F+     ++ ++ T MI  Y ++G    A++ +  MR +G+E + FT+ +IL AC
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180

Query: 246 AAVSARDF---GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
              S+ DF   G  +H  IL S    N+ V++ALI MYAKCG L  ++ L    ++ + V
Sbjct: 181 ---SSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVV 237

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SWN+MI  +   G  K+A SLF +M       D +T+ S+L   AS   L + + +H  I
Sbjct: 238 SWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRI 297

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
              GF+    + N LI M+ + G+L+ A   F  ++ K++ +W +++   A     ++AL
Sbjct: 298 TARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDAL 357

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
             + +M + G  PD    SS++ +CA L  L  G+ +H      G    + +  +LV +Y
Sbjct: 358 FLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMY 417

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
           AKCG + DA + FD +  +DV++W+A+I   AQ+G  +EAL+    M  +G   + +T  
Sbjct: 418 AKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTAS 477

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
            +L ACSH G       YF  + + +GI+   ++    IDLLGR+G L EA+ +L  M  
Sbjct: 478 SVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPF 537

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
           +        LL  C+VHGD+  G+     +  LEP N   YV L+NMY+ AG+W+D A++
Sbjct: 538 KVSFVALVTLLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKL 597

Query: 663 RKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIK-EAGYVPD 721
           R+ M+ +G++++ GCS +E   +++ F   D  +P   +I ++++ +   +K E GYVPD
Sbjct: 598 RRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERLYSRMKEEEGYVPD 657

Query: 722 MNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISA 781
                H+V ++ KE  L +HSEK+A+ FGL+T P G+ +RI KNLRVC DCHT  K  S 
Sbjct: 658 TRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTLRIIKNLRVCSDCHTVGKLASK 717

Query: 782 VYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +  R II+RD  RFHHF+ G CSCGDYW
Sbjct: 718 ITGRRIIVRDGTRFHHFEGGICSCGDYW 745



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 98/183 (53%), Gaps = 1/183 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           DRD    N +I+ +   G L  A++ F     K    W++++  Y+ +    +A  L+  
Sbjct: 303 DRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKN 362

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M LEG+ P ++T  +V+  C+  G L+ G+  H  +    F+ +  + T LV+MYAKC  
Sbjct: 363 MLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGS 422

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A+  F    + K+ V+W+ MI   +Q+G+  +A+E    M ++G+  N+ T  S+L 
Sbjct: 423 LADAKKSFDGISN-KDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLH 481

Query: 244 ACA 246
           AC+
Sbjct: 482 ACS 484


>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 855

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 242/652 (37%), Positives = 381/652 (58%), Gaps = 3/652 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++  Y   G L++A+K F+    +N  +W+ +I GYS  G + +A  ++ QM   GY 
Sbjct: 196 NHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYF 255

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P   T  ++++ C + G +  G Q HG+ IK+ +D +      L+ MY +   I  A  +
Sbjct: 256 PDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDV 315

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV-ESNQFTFPSILTACAAVS 249
           F M    K+ ++W +MITG++Q GY  +A+  FRDM  +G  + N+F F S+ +AC ++ 
Sbjct: 316 FTMI-STKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLL 374

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
             +FG Q+HG     G   NV+   +L DMYAK G L SA R     E  + VSWN++I 
Sbjct: 375 EPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIA 434

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
            F+  G   EA+  F +M    +  D  T+ S+L    S + +N    +HS I+K G + 
Sbjct: 435 AFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDK 494

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVF-NLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
              V N+L+ MY K  NL  AF VF ++ ++ +++SW ++++ C  H    E  + F  M
Sbjct: 495 EAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLM 554

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
             S   PD++ +++IL  CAEL  LE G QVH   +KSG    +SV N L+ +YAKCG +
Sbjct: 555 LFSENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSL 614

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
             A  VF S    D+++W++LI+G AQ G G EAL  +  M   G +P+ +T++G+L AC
Sbjct: 615 KHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSAC 674

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           SH GL E    ++ +M+   GI P  +H +CM+DLL R+G L EA+  + +M   PD T+
Sbjct: 675 SHIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITM 734

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           WK LL++C+ HG++++ ERAA N+ +L+P N+   V LSN++++ G W++ AR+R LMK 
Sbjct: 735 WKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASVGNWKEVARLRNLMKQ 794

Query: 669 RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
            G++K PG SW+    Q+H+F SED  H  R DIY+ ++++ L + + GY P
Sbjct: 795 MGVQKVPGQSWIAVKDQIHVFFSEDNSHQQRGDIYTMLEDLWLQMLDDGYDP 846



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 148/514 (28%), Positives = 245/514 (47%), Gaps = 16/514 (3%)

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
           T  N++  C+    L+ G++ H + +K+    +  +   +++MY KC  + +A   F   
Sbjct: 159 TYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTM 218

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
              +N V+WT MI+GYSQNG    AI  +  M   G   +  TF SI+ AC      D G
Sbjct: 219 -QLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLG 277

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
            Q+HG ++ SG++ ++  Q+ALI MY + G +  A  +       + +SW SMI GF + 
Sbjct: 278 RQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQL 337

Query: 315 GFHKEALSLFKKMHARDI-KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
           G+  EAL LF+ M  +   + ++F + SV +   S ++    + +H +  K G     F 
Sbjct: 338 GYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFA 397

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
             +L DMYAK G L  A   F  ++  D++SW ++I   +  G   EA+ +F  M  +G+
Sbjct: 398 GCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGL 457

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
            PD +   S+L AC     +  G Q+H+  +K G     +V NSL+ +Y KC  ++DA  
Sbjct: 458 MPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFN 517

Query: 494 VF-DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
           VF D     ++++W A++  C Q+ +  E  + +  ML    KPD IT   +L  C    
Sbjct: 518 VFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTC---- 573

Query: 553 LAENARWYFESMDKVYGIKPG----PDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
            AE A     +    + +K G          +ID+  + G L  A+ +       PD   
Sbjct: 574 -AELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGS-TQNPDIVS 631

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           W +L+     +    LG  A N    ++ +   P
Sbjct: 632 WSSLIVG---YAQFGLGHEALNLFRMMKNLGVQP 662



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 148/479 (30%), Positives = 229/479 (47%), Gaps = 13/479 (2%)

Query: 49  SGEIDEAGQL----FEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSL 104
           +G+ID   QL     +   D      N +I+ Y   G++  A  +F     K+  +W+S+
Sbjct: 271 AGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASM 330

Query: 105 IYGYSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVLRLCSLKGLLQR--GEQFHGYAIK 161
           I G++  G +IEA  LF  M  +G Y+P+++   +V   C  + LL+   G Q HG   K
Sbjct: 331 ITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSAC--RSLLEPEFGRQIHGMCAK 388

Query: 162 TCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIE 221
                N F    L DMYAK   +  A   F    +  + V+W  +I  +S +G   +AI 
Sbjct: 389 FGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQI-ESPDLVSWNAIIAAFSDSGDVNEAIY 447

Query: 222 CFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYA 281
            F  M   G+  +  TF S+L AC +    + G Q+H  I+  G +    V ++L+ MY 
Sbjct: 448 FFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYT 507

Query: 282 KCGDLDSARRLL-EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
           KC +L  A  +  + SE  N VSWN+++    +     E   LFK M   + K D+ T  
Sbjct: 508 KCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITIT 567

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
           ++L   A    L     VH   VK+G      V+N LIDMYAK G+L  A  VF   Q+ 
Sbjct: 568 TILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNP 627

Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
           D++SW+SLI G A  G   EAL  F  M+  G+ P+ V    +LSAC+ + ++E G   +
Sbjct: 628 DIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFY 687

Query: 461 AVF-LKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM-HTRDVITWTALIMGCAQNG 517
               ++ G   +    + +V + A+ GC+ +A      M    D+  W  L+  C  +G
Sbjct: 688 NTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHG 746



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 177/362 (48%), Gaps = 8/362 (2%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           R+ F   ++   YA  G L  A + F +    +  +W+++I  +S+ G   EA   F QM
Sbjct: 393 RNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQM 452

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
              G  P   T  ++L  C     + +G Q H Y IK   D  A V   L+ MY KC  +
Sbjct: 453 MHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNL 512

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            +A  +FK   +  N V+W  +++   Q+    +    F+ M     + +  T  +IL  
Sbjct: 513 HDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGT 572

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           CA +++ + G QVH   + SG   +V V + LIDMYAKCG L  AR +   ++  + VSW
Sbjct: 573 CAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSW 632

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIV 363
           +S+IVG+A+ G   EAL+LF+ M    ++ ++ TY  VL+ C    +        +++ +
Sbjct: 633 SSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEI 692

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ----DKDVISWTSLITGCAYHGSYE 419
           + G    +   + ++D+ A+ G   C +   N ++    + D+  W +L+  C  HG+ +
Sbjct: 693 ELGIPPTREHVSCMVDLLARAG---CLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVD 749

Query: 420 EA 421
            A
Sbjct: 750 IA 751



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 70/176 (39%), Gaps = 32/176 (18%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           NR +  ++  G +  A  +F    + D  +W+++I  YA                     
Sbjct: 602 NRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYA--------------------- 640

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG-Y 158
                      +GL  EA  LF  M+  G +P++ T   VL  CS  GL++ G  F+   
Sbjct: 641 ----------QFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTM 690

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
            I+         V+ +VD+ A+  C++EAE   K      +   W T++     +G
Sbjct: 691 EIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHG 746


>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 579

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 244/581 (41%), Positives = 360/581 (61%), Gaps = 5/581 (0%)

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           ++  G+ ++  T+  ++  C +  A   G  +   +  +G +  +++ + LI+MY K   
Sbjct: 4   LQSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNL 63

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           L+ A +L +     N +SW +MI  +++   H++AL L   M    ++ + +TY SVL  
Sbjct: 64  LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLR- 122

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
            A N  +++ + +H  I+K G E   +V +ALID++AK G  + A  VF+ M   D I W
Sbjct: 123 -ACN-GMSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVW 180

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
            S+I G A +   + AL+ F  M+ +G   +   ++S+L AC  L +LE G Q H   +K
Sbjct: 181 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK 240

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
                 L ++N+LV +Y KCG + DA RVF+ M  RDVITW+ +I G AQNG  +EAL+ 
Sbjct: 241 YD--QDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKL 298

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
           ++ M + GTKP+YIT VG+LFACSHAGL E+  +YF SM K+YGI PG +HY CMIDLLG
Sbjct: 299 FELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLG 358

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ 645
           ++GKL +A  LL++M  EPDA  W+ LL ACRV  ++ L E AA  +  L+P +A  Y  
Sbjct: 359 KAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTV 418

Query: 646 LSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSK 705
           LSN+Y+ + KW+    +RK M+  GI+KEPGCSW+E N Q+H FI  D  HP   ++  K
Sbjct: 419 LSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAFIIGDESHPQIVEVNKK 478

Query: 706 IDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKN 765
           +++++  +   GYVP+ NF L ++E E  E  L +HSEKLA+AFGL+TLP    IRI KN
Sbjct: 479 LNQLIHRLIGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPSEKVIRIRKN 538

Query: 766 LRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCG 806
           LR+CGDCH   K  S +  R+I++RD  R+HHF+ G CSCG
Sbjct: 539 LRICGDCHVFCKLASKLENRNIVIRDPIRYHHFQDGKCSCG 579



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 214/423 (50%), Gaps = 24/423 (5%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N +I  Y     L +A +LF++ P +N  +W+++I  YS   +  +A EL   M  +
Sbjct: 49  FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 108

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G RP+ YT  +VLR C+    +      H   IK   + + +V + L+D++AK     +A
Sbjct: 109 GVRPNVYTYSSVLRACN---GMSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDA 165

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F     G + + W ++I G++QN     A+E F+ M+  G  + Q T  S+L AC  
Sbjct: 166 LSVFDEMVTG-DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG 224

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           ++  + G Q H  I+   ++ ++ + +AL+DMY KCG L+ ARR+    +  + ++W++M
Sbjct: 225 LALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTM 282

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA----KSVHSLI- 362
           I G A+ G+ +EAL LF+ M +   K +  T   VL   +    L +     +S+  L  
Sbjct: 283 ISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 342

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEA 421
           +  G E Y      +ID+  K G LD A  + N M+ + D ++W +L+  C    +    
Sbjct: 343 INPGREHY----GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNM--V 396

Query: 422 LKYFSDMRISGICPD----HVVVSSILSACAEL-TVLEFGQQVHAVFL-KSGGCSSLSVD 475
           L  ++  ++  + P+    + V+S+I +   +  +V E  +++  + + K  GCS + V+
Sbjct: 397 LAEYAAKKVIALDPEDAGTYTVLSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVN 456

Query: 476 NSL 478
             +
Sbjct: 457 KQI 459



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 154/313 (49%), Gaps = 18/313 (5%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           + D +  + +I  +A  G   +A  +F+E    +   W+S+I G++       A ELF +
Sbjct: 143 ESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKR 202

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+  G+   Q TL +VLR C+   LL+ G Q H + +K  +D +  +   LVDMY KC  
Sbjct: 203 MKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGS 260

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A  +F    + ++ + W+TMI+G +QNGY  +A++ F  M+  G + N  T   +L 
Sbjct: 261 LEDARRVFNQMKE-RDVITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLF 319

Query: 244 ACAAVSARDFG-------AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           AC+     + G        +++G  ++ G E        +ID+  K G LD A +LL   
Sbjct: 320 ACSHAGLLEDGWYYFRSMKKLYG--INPGREH----YGCMIDLLGKAGKLDDAVKLLNEM 373

Query: 297 EID-NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
           E + + V+W +++     Q     A    KK+ A D + D  TY  + N +A++   ++ 
Sbjct: 374 ECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPE-DAGTYTVLSNIYANSQKWDSV 432

Query: 356 KSVHSLIVKTGFE 368
           + +   +   G +
Sbjct: 433 EEIRKRMRDIGIK 445



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 35/172 (20%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           LN ALVD +   G +++A ++F +M +RD  TW+TMI+  A +G  +EA KL        
Sbjct: 247 LNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKL-------- 298

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                               FEL   M+  G +P+  T+  VL  CS  GLL+ G  ++ 
Sbjct: 299 --------------------FEL---MKSSGTKPNYITIVGVLFACSHAGLLEDG-WYYF 334

Query: 158 YAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
            ++K  + +N        ++D+  K   + +A  L        + V W T++
Sbjct: 335 RSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 386


>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
          Length = 633

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 238/572 (41%), Positives = 357/572 (62%), Gaps = 1/572 (0%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           + SI+ ACA          +H  +  S    + ++ ++LI MY KCG +  AR + +   
Sbjct: 63  YHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMP 122

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
             + VSW  +I G+A+     EA+ L   M     + + FT+ S+L    +    +  + 
Sbjct: 123 SRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQ 182

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           +H+L VK  ++   +V +AL+DMYA+   +D A MVF+ +  K+ +SW +LI G A    
Sbjct: 183 MHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKAD 242

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
            E  L  F++M+ +G    H   SS+ SA A +  LE G+ VHA  +KSG   +  V N+
Sbjct: 243 GETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNT 302

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
           ++ +YAK G + DA +VFD M  RD++TW  ++   AQ G GKEA+  ++++   G + +
Sbjct: 303 MLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLN 362

Query: 538 YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALL 597
            ITF+ +L ACSH GL +  + YF+ M K Y ++P  DHY   +DLLGR+G L EA   +
Sbjct: 363 QITFLSVLTACSHGGLVKEGKHYFDMM-KDYNVQPEIDHYVSFVDLLGRAGLLKEALIFV 421

Query: 598 DQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWE 657
            +M  EP A VW ALL ACR+H + ++G+ AA+++FEL+P +  P V L N+Y++ GKW 
Sbjct: 422 FKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWN 481

Query: 658 DAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAG 717
           DAARVRK+MK+ G++KEP CSWV+  + VH+F+++D  HP   DIY   +EI + IK+AG
Sbjct: 482 DAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMRIKKAG 541

Query: 718 YVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMK 777
           YVP+    L ++ E+ +E  L YHSEK+A+AF L+ +P GA IRI KN+R+CGDCH+A K
Sbjct: 542 YVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGASIRIMKNIRICGDCHSAFK 601

Query: 778 YISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           Y+S V+ R I++RD+NRFHHF  G+CSCGDYW
Sbjct: 602 YVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 633



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 211/445 (47%), Gaps = 4/445 (0%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+     +++  C+    L      H +  ++C   +AF++  L+ MY KC  + +A ++
Sbjct: 58  PTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHV 117

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P  ++ V+WT +I GY+QN    +AI    DM       N FTF S+L A  A   
Sbjct: 118 FDKMPS-RDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGG 176

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              G Q+H   +   ++ +VYV SAL+DMYA+C  +D A  + +     NEVSWN++I G
Sbjct: 177 CSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAG 236

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           FAR+   +  L  F +M         FTY S+ + FA    L   + VH+ ++K+G +  
Sbjct: 237 FARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLT 296

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
            FV N ++ MYAK G++  A  VF+ M  +D+++W +++T  A +G  +EA+ +F ++R 
Sbjct: 297 AFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRK 356

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
            GI  + +   S+L+AC+   +++ G+    +         +    S V +  + G + +
Sbjct: 357 CGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKE 416

Query: 491 A-NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
           A   VF          W AL+  C  +   K      D +      PD      LL+   
Sbjct: 417 ALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFE--LDPDDTGPPVLLYNIY 474

Query: 550 HAGLAENARWYFESMDKVYGIKPGP 574
            +    N       M K  G+K  P
Sbjct: 475 ASTGKWNDAARVRKMMKATGVKKEP 499



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 178/351 (50%), Gaps = 2/351 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N++I  Y   G + +A+ +F++ P ++  +W+ LI GY+   +  EA  L   M 
Sbjct: 94  DAFLLNSLIHMYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDML 153

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
              +RP+ +T  ++L+     G    GEQ H  A+K  +D + +V + L+DMYA+C+ + 
Sbjct: 154 RARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMD 213

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A  +F      KN V+W  +I G+++   G   +  F +M+  G  +  FT+ S+ +A 
Sbjct: 214 MAIMVFDRLVS-KNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAF 272

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A + A + G  VH  ++ SG +   +V + ++ MYAK G +  AR++ +  +  + V+WN
Sbjct: 273 ARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWN 332

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +M+   A+ G  KEA++ F+++    I+++  T+ SVL   +    +   K    ++   
Sbjct: 333 TMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDY 392

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFM-VFNLMQDKDVISWTSLITGCAYH 415
             +       + +D+  + G L  A + VF +  +     W +L+  C  H
Sbjct: 393 NVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMH 443



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 171/356 (48%), Gaps = 17/356 (4%)

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
           +HA ++      Y S++   A   +L  A+++H+ + ++   G  F+ N+LI MY K G 
Sbjct: 51  LHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGA 110

Query: 387 LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSA 446
           +  A  VF+ M  +DV+SWT LI G A +    EA+    DM  +   P+    +S+L A
Sbjct: 111 VSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKA 170

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITW 506
                    G+Q+HA+ +K      + V ++L+ +YA+C  ++ A  VFD + +++ ++W
Sbjct: 171 TGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSW 230

Query: 507 TALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDK 566
            ALI G A+   G+  L  + +M   G    + T+  +  A +  G  E  RW    +  
Sbjct: 231 NALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHL-- 288

Query: 567 VYGIKPGPDHYA----CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDL 622
              IK G    A     M+ +  +SG +++A+ + D+M  + D   W  +L+A   +G  
Sbjct: 289 ---IKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRM-DKRDLVTWNTMLTALAQYG-- 342

Query: 623 ELGERAANNLFELEP----MNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
            LG+ A  +  E+      +N + ++ +    S  G  ++      +MK   ++ E
Sbjct: 343 -LGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPE 397



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 142/307 (46%), Gaps = 5/307 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D +  + ++  YA   ++  A  +F+    KN  +W++LI G++           F +
Sbjct: 193 DEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAE 252

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           MQ  G+  + +T  ++    +  G L++G   H + IK+   L AFV   ++ MYAK   
Sbjct: 253 MQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGS 312

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A  +F    D ++ V W TM+T  +Q G G +A+  F ++R  G++ NQ TF S+LT
Sbjct: 313 MVDARKVFDRM-DKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLT 371

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC+       G      +     +  +    + +D+  + G L  A   +    ++   +
Sbjct: 372 ACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAA 431

Query: 304 WNSMIVGFARQGFHKEA-LSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSL 361
               ++G  R   HK A +  +   H  ++  DD   P +L N +AS    N+A  V  +
Sbjct: 432 VWGALLGACR--MHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKM 489

Query: 362 IVKTGFE 368
           +  TG +
Sbjct: 490 MKATGVK 496



 Score = 46.6 bits (109), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 11/165 (6%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF---- 95
           N  L  ++ SG + +A ++F++M  RD  TWNTM+ A A  G  +EA   F E       
Sbjct: 301 NTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQ 360

Query: 96  KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
            N  T+ S++   S+ GL  E    F  M+    +P      + + L    GLL+    F
Sbjct: 361 LNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIF 420

Query: 156 HGYAIKTCFDLNAFV---VTGLVDMYAKCKC-IFEAEYLFKMFPD 196
                K   +  A V   + G   M+   K   + A+++F++ PD
Sbjct: 421 ---VFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPD 462


>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 770

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 259/684 (37%), Positives = 391/684 (57%), Gaps = 15/684 (2%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           +L  C   G L   +  HG+ +KT   ++ FV T LV++Y +C    +A  LF   P+ K
Sbjct: 84  LLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPE-K 142

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           N V WT +ITGY+ N     A+E F +M   G   + +T   +L+AC A    D G QVH
Sbjct: 143 NVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVH 202

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR-QGFH 317
           G  +  G  +   + ++L  +Y K G+L+S  R  +     N ++W +MI   A  + + 
Sbjct: 203 GYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYT 262

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
           +  L+LF  M   ++  ++FT  SV++   +++D+N  K V     K G      V N+ 
Sbjct: 263 ELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNST 322

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA---------YHGSYE--EALKYFS 426
           + +Y ++G  + A  +F  M+D  VI+W ++I+G A          H      +ALK F 
Sbjct: 323 MYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFR 382

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
           D+  S + PD    SSILS C+ +  LE G+Q+HA  +K+G  S + V+++LV +Y KCG
Sbjct: 383 DLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCG 442

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
           CI  A + F  M TR ++TWT++I G +Q+G+  +A+Q ++ M+  G KP+ ITFV LL 
Sbjct: 443 CIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLS 502

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ACS+AGL E A  YF+ M   Y I+P  DHY CMID+  R G+L +A A + +   EP+ 
Sbjct: 503 ACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEPNE 562

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
            +W +L++ CR HG++EL   AA+ L EL+P     YV L NMY + G+W D ARVRKL 
Sbjct: 563 AIWSSLVAGCRSHGNMELAFYAADRLLELKPKVVETYVLLLNMYISTGRWRDVARVRKLS 622

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFAL 726
           K   +      SW+    +V+ F ++DR HP  T++Y  ++ ++   K  GY P  N  L
Sbjct: 623 KHEDLGILRDRSWITIRDKVYFFKADDRSHPQSTELYQLLETLLEKAKAIGYEPYQNTEL 682

Query: 727 HNVEEEGKEIG--LAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
           ++ EE+GK     L +HSE+LAVA GLL  P G  +RI KN+ +C DCH+++K+ S +  
Sbjct: 683 YDSEEDGKPAAGSLKHHSERLAVALGLLKAPPGVTVRITKNITMCRDCHSSIKFFSLLAN 742

Query: 785 RHIILRDSNRFHHFKAGNCSCGDY 808
           R I++RDS R H FK G CSCGD+
Sbjct: 743 REIVVRDSKRLHKFKDGRCSCGDF 766



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 157/538 (29%), Positives = 268/538 (49%), Gaps = 29/538 (5%)

Query: 30  GNSVKPA---SDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREA 86
           G SV+ A     L+R +   S  G     G + +  +  D F   +++  Y   G  ++A
Sbjct: 73  GQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDA 132

Query: 87  KKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLK 146
           + LF+E P KN  TW++LI GY+     + A E+F +M   G  PS YTL  +L  C   
Sbjct: 133 RNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVAS 192

Query: 147 GLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTM 206
             +  G+Q HGY IK        +   L  +Y K   +      FK  PD KN + WTTM
Sbjct: 193 HNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPD-KNVITWTTM 251

Query: 207 ITGYSQN-GYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
           I+  +++  Y    +  F DM    V  N+FT  S+++ C      + G QV G     G
Sbjct: 252 ISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIG 311

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR------------ 313
              N+ V+++ + +Y + G+ + A RL E  E ++ ++WN+MI GFA+            
Sbjct: 312 CATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHAR 371

Query: 314 -QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
            +GF  +AL +F+ +    +K D FT+ S+L+  ++ + L   + +H+  +KTGF     
Sbjct: 372 SRGF--QALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVV 429

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           VN+AL++MY K G ++ A   F  M  + +++WTS+I+G + HG   +A++ F DM ++G
Sbjct: 430 VNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAG 489

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLVLVYAKCGCIND 490
             P+ +   S+LSAC+   ++E   +   +         L +D+   ++ ++ + G ++D
Sbjct: 490 AKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPL-MDHYGCMIDMFVRLGRLDD 548

Query: 491 ANRVF--DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI-TFVGLL 545
           A            + I W++L+ GC  +G  + A    D++L    KP  + T+V LL
Sbjct: 549 AYAFIKRKGFEPNEAI-WSSLVAGCRSHGNMELAFYAADRLLE--LKPKVVETYVLLL 603



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 213/484 (44%), Gaps = 53/484 (10%)

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M  EG       +  +L  C    +      +HG ++ +G   +++V ++L+++Y +CG+
Sbjct: 69  MLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGN 128

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN- 344
              AR L +     N V+W ++I G+        AL +F +M        D+T   +L+ 
Sbjct: 129 SQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSA 188

Query: 345 CFAS-NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVI 403
           C AS NIDL   K VH   +K G      + N+L  +Y K GNL+     F  + DK+VI
Sbjct: 189 CVASHNIDL--GKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVI 246

Query: 404 SWTSLITGCAYHGSYEE-ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAV 462
           +WT++I+ CA   +Y E  L  F DM    + P+   ++S++S C     +  G+QV   
Sbjct: 247 TWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGF 306

Query: 463 FLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ------- 515
             K G  ++L V NS + +Y + G   +A R+F+ M    VITW A+I G AQ       
Sbjct: 307 CFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKD 366

Query: 516 ----NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGI- 570
                 +G +AL+ +  ++    KPD  TF  +L  CS     E          K   + 
Sbjct: 367 DLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLS 426

Query: 571 -------------KPGPDHYAC----------------MIDLLGRSGKLIEAKALLDQMV 601
                        K G   YA                 MI    + G+  +A  L + M+
Sbjct: 427 DVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMI 486

Query: 602 ---GEPDATVWKALLSACRVHGDLELGER---AANNLFELEPMNAMPYVQLSNMYSTAGK 655
               +P+   + +LLSAC   G +E   R      N + +EP+    Y  + +M+   G+
Sbjct: 487 LAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDH-YGCMIDMFVRLGR 545

Query: 656 WEDA 659
            +DA
Sbjct: 546 LDDA 549


>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 822

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 267/753 (35%), Positives = 421/753 (55%), Gaps = 6/753 (0%)

Query: 58  LFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEA 117
           + +K S  D F  N ++ AY  +G  ++A  LF+E P +N  ++ +L  GY+      + 
Sbjct: 75  ILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLTQGYACQ----DP 130

Query: 118 FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
             L+ ++  EG+  + +   + L+L       +     H   +K  +D NAFV   L++ 
Sbjct: 131 VGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAALINA 190

Query: 178 YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
           Y+ C  +  A  +F+     K+ V W  +++ Y +NG    +++    M ++G   N +T
Sbjct: 191 YSVCGSVDSARSVFEGIL-CKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYT 249

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           F + L A   + A  F   VHG IL + +E +  V   L+ +Y + GD+  A ++     
Sbjct: 250 FDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMP 309

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
            ++ V W+ MI  F + GF  +A+ +F +M    +  ++FT  S+LN  A        + 
Sbjct: 310 KNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQ 369

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           +H L+VK GF+   +V+NALID+YAK   +D A  +F  +  K+V+SW ++I G    G 
Sbjct: 370 LHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGE 429

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
             +AL  F +   + +    V  SS L ACA L  +E G QVH + +K+     ++V NS
Sbjct: 430 GGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNS 489

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
           L+ +YAKCG I  A  VF+ M T DV +W ALI G + +G G++AL+ +D M     KP+
Sbjct: 490 LIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPN 549

Query: 538 YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALL 597
            +TF+G+L  CS+AGL +  +  FESM   +GI+P  +HY CM+ L GRSG+L +A  L+
Sbjct: 550 GLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLI 609

Query: 598 DQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWE 657
           + +  EP   +W+A+LSA     + E   R+A  + ++ P +   YV LSNMY+ A +W 
Sbjct: 610 EGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEILKINPKDEATYVLLSNMYAGAKQWA 669

Query: 658 DAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAG 717
           + A +RK MK +G++KEPG SW+E    VH F      HP    I   ++ + +    AG
Sbjct: 670 NVASIRKSMKEKGVKKEPGLSWIEHQGDVHFFSVGSSDHPDMKLINGMLEWLNMKATRAG 729

Query: 718 YVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA-PIRIFKNLRVCGDCHTAM 776
           YVPD N  L ++++E K+  L  HSE+LA+A+GL+ +P     I I KNLR+C DCH+AM
Sbjct: 730 YVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAM 789

Query: 777 KYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           K IS++  R +++RD NRFHHF AG CSC D+W
Sbjct: 790 KVISSIVQRDLVIRDMNRFHHFHAGVCSCDDHW 822



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 194/392 (49%), Gaps = 5/392 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           GQ+ +   + D      ++  Y   G + +A K+FNE P  +   WS +I  +   G   
Sbjct: 271 GQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCN 330

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           +A ++F +M+     P+++TL ++L  C++      GEQ HG  +K  FDL+ +V   L+
Sbjct: 331 KAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALI 390

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           D+YAKC+ +  A  LF      KN V+W T+I GY   G G KA+  FR+     V   +
Sbjct: 391 DVYAKCEKMDTAVKLFAEL-SSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTE 449

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            TF S L ACA++++ + G QVHG  + +     V V ++LIDMYAKCGD+  A+ +   
Sbjct: 450 VTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNE 509

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNN 354
            E  +  SWN++I G++  G  ++AL +F  M   D K +  T+  VL+ C  + +    
Sbjct: 510 METIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQG 569

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCA 413
                S+I   G E        ++ ++ + G LD A  ++  +  +  V+ W ++++  A
Sbjct: 570 QDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLS--A 627

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
               Y E     S   I  I P       +LS
Sbjct: 628 SMNQYNEEFARRSAEEILKINPKDEATYVLLS 659



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 140/499 (28%), Positives = 241/499 (48%), Gaps = 28/499 (5%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIK--TCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD 196
           +LR C  K      +  H   +K  +C DL  F    L++ Y K     +A  LF   P+
Sbjct: 55  MLRRCIRKNDSVSAKAIHCDILKKGSCLDL--FATNILLNAYVKAGFDKDALNLFDEMPE 112

Query: 197 GKNHVAWTTMITGYS-QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGA 255
            +N+V++ T+  GY+ Q+  G      +  +  EG E N   F S L    ++   +   
Sbjct: 113 -RNNVSYVTLTQGYACQDPVGL-----YSRLHREGHELNPHVFTSFLKLFVSLDKAEICW 166

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
            +H  I+  G+++N +V +ALI+ Y+ CG +DSAR + E     + V W  ++  +   G
Sbjct: 167 WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENG 226

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
             +++L L  +M       +++T+ + L         + AKSVH  I+KT +E    V  
Sbjct: 227 CFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGV 286

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
            L+ +Y + G++  AF VFN M   DV+ W+ +I     +G   +A+  F  MR   + P
Sbjct: 287 GLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVP 346

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           +   +SSIL+ CA       G+Q+H + +K G    + V N+L+ VYAKC  ++ A ++F
Sbjct: 347 NEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLF 406

Query: 496 DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAE 555
             + +++V++W  +I+G    G+G +AL  + + L        +TF   L AC  A LA 
Sbjct: 407 AELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGAC--ASLAS 464

Query: 556 NARWYFESMDKVYGIKPGPDHYA------CMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
                 E   +V+G+    ++         +ID+  + G +  A+ + ++M    D   W
Sbjct: 465 -----MELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEM-ETIDVASW 518

Query: 610 KALLSACRVHGDLELGERA 628
            AL+S    HG   LG +A
Sbjct: 519 NALISGYSTHG---LGRQA 534



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 149/315 (47%), Gaps = 8/315 (2%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
            + ++L  C   +       +H  IL  G   +++  + L++ Y K G    A  L +  
Sbjct: 51  AYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEM 110

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              N VS+ ++  G+A Q    + + L+ ++H    +++   + S L  F S        
Sbjct: 111 PERNNVSYVTLTQGYACQ----DPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICW 166

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +HS IVK G++   FV  ALI+ Y+  G++D A  VF  +  KD++ W  +++    +G
Sbjct: 167 WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENG 226

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS--V 474
            +E++L+  S M + G  P++    + L A   L    F + VH   LK+  C  L   V
Sbjct: 227 CFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKT--CYELDPRV 284

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
              L+ +Y + G ++DA +VF+ M   DV+ W+ +I    QNG   +A+  + +M     
Sbjct: 285 GVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFV 344

Query: 535 KPDYITFVGLLFACS 549
            P+  T   +L  C+
Sbjct: 345 VPNEFTLSSILNGCA 359



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 6/209 (2%)

Query: 334 IDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM 392
           +D   Y ++L  C   N D  +AK++H  I+K G     F  N L++ Y K G    A  
Sbjct: 47  LDSHAYGTMLRRCIRKN-DSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALN 105

Query: 393 VFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV 452
           +F+ M +++ +S+ +L  G A     ++ +  +S +   G   +  V +S L     L  
Sbjct: 106 LFDEMPERNNVSYVTLTQGYA----CQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDK 161

Query: 453 LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMG 512
            E    +H+  +K G  S+  V  +L+  Y+ CG ++ A  VF+ +  +D++ W  ++  
Sbjct: 162 AEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSC 221

Query: 513 CAQNGKGKEALQFYDQMLARGTKPDYITF 541
             +NG  +++LQ   +M   G  P+  TF
Sbjct: 222 YVENGCFEDSLQLLSRMGMDGFMPNNYTF 250



 Score = 44.3 bits (103), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 45/225 (20%), Positives = 92/225 (40%), Gaps = 14/225 (6%)

Query: 393 VFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV 452
           + ++ + + ++   + I  C +     E+   +SD  +   C D     ++L  C     
Sbjct: 7   IIHVAESRRLMIQCNRIRQCGFSVQTAESSVQWSDSVVP--CLDSHAYGTMLRRCIRKND 64

Query: 453 LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMG 512
               + +H   LK G C  L   N L+  Y K G   DA  +FD M  R+ +++  L  G
Sbjct: 65  SVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLTQG 124

Query: 513 CAQNGKGKEALQFYDQMLARGTKPD---YITFVGLLFACSHAGLAENARWYFESMDKVYG 569
            A     ++ +  Y ++   G + +   + +F+ L  +   A +     W+  S     G
Sbjct: 125 YA----CQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEIC----WWLHSPIVKLG 176

Query: 570 IKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
                   A +I+     G +  A+++ + ++ + D  VW  ++S
Sbjct: 177 YDSNAFVGAALINAYSVCGSVDSARSVFEGILCK-DIVVWAGIVS 220



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 8/182 (4%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN----ET 93
           ++ +L+D ++  G+I  A  +F +M   D  +WN +I+ Y+  G  R+A ++F+      
Sbjct: 486 VSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSD 545

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRG 152
              N  T+  ++ G SN GL  +  + F  M  + G  P       ++RL    G L + 
Sbjct: 546 CKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKA 605

Query: 153 EQF-HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP-DGKNHVAWTTMITGY 210
                G   +    +   +++  ++ Y +      AE + K+ P D   +V  + M  G 
Sbjct: 606 MNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEILKINPKDEATYVLLSNMYAGA 665

Query: 211 SQ 212
            Q
Sbjct: 666 KQ 667


>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 684

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 259/662 (39%), Positives = 391/662 (59%), Gaps = 6/662 (0%)

Query: 152 GEQFHGYAIKT-CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
           G   H + I+T    L +F+   LV+MY+K   +  A+++  +    +  V WT++I+G 
Sbjct: 25  GRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSL-THLRTVVTWTSLISGC 83

Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV 270
             N     A+  F +MR + V+ N FTFP +  A A V     G Q+HG  L  G   +V
Sbjct: 84  VHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDV 143

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
           +V  +  DMY K G    A  + +     N  +WN+ I    +     +A+  FK+    
Sbjct: 144 FVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCV 203

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
             + +  T+ + LN     + LN  + +H+ IV+ G++    V N LID Y K G++  A
Sbjct: 204 HGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSA 263

Query: 391 FMVFNLMQD-KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE 449
            MVFN + + K+V+SW S++     +   E A   F   R   + P   ++SS+LSACAE
Sbjct: 264 EMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQAR-KEVEPTDFMISSVLSACAE 322

Query: 450 LTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTAL 509
           L  LE G+ VHA+ +K+    ++ V ++LV +Y KCG I +A +VF  +  R+++TW A+
Sbjct: 323 LGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAM 382

Query: 510 IMGCAQNGKGKEALQFYDQML--ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKV 567
           I G A  G    AL+ +++M   + G +P Y+T + +L  CS  G  E     FESM   
Sbjct: 383 IGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLN 442

Query: 568 YGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGER 627
           YGI+PG +H+AC++DLLGRSG +  A   +  M  +P  +VW ALL ACR+HG  ELG+ 
Sbjct: 443 YGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKI 502

Query: 628 AANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVH 687
           AA  LFEL+ +++  +V LSNM ++AG+WE+A  VRK MK  GI+K  G SW+   +++H
Sbjct: 503 AAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAVKNRIH 562

Query: 688 IFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAV 747
           +F ++D  H   ++I + + ++   +KEAGYVPD N +L ++E+E K   + YHSEK+A+
Sbjct: 563 VFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLFDLEDEEKASEVWYHSEKIAL 622

Query: 748 AFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGD 807
           AFGL+ LPQG PIRI KNLR+CGDCH+A+K+IS +  R II+RD++RFH FK G CSC D
Sbjct: 623 AFGLIALPQGVPIRITKNLRICGDCHSAIKFISRIVGREIIVRDNHRFHRFKDGCCSCKD 682

Query: 808 YW 809
           YW
Sbjct: 683 YW 684



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 134/457 (29%), Positives = 222/457 (48%), Gaps = 9/457 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N ++  Y+    L  A+ + + T  +   TW+SLI G  +    + A   F  M+ +
Sbjct: 43  FLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRD 102

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
             +P+ +T   V +  +   +   G+Q HG A+K     + FV     DMY K     +A
Sbjct: 103 NVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDA 162

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F   P  +N   W   I+   Q+     AI  F++      E N  TF + L AC  
Sbjct: 163 CNMFDEMPQ-RNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVD 221

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL-EYSEIDNEVSWNS 306
           +   + G Q+H  I+  G++ +V V + LID Y KCGD+ SA  +        N VSW S
Sbjct: 222 MVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCS 281

Query: 307 MIVGFARQGFHKEALSLFKKMHAR-DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           M+    +   H+E  +    + AR +++  DF   SVL+  A    L   +SVH+L VK 
Sbjct: 282 MLAALVQN--HEEERACMVFLQARKEVEPTDFMISSVLSACAELGGLELGRSVHALAVKA 339

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
             E   FV +AL+DMY K G+++ A  VF+ + ++++++W ++I G A+ G  + AL+ F
Sbjct: 340 CVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLF 399

Query: 426 SDMRIS--GICPDHVVVSSILSACAELTVLEFGQQV-HAVFLKSGGCSSLSVDNSLVLVY 482
            +M +   GI P +V + SILS C+ +  +E G Q+  ++ L  G          +V + 
Sbjct: 400 EEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLL 459

Query: 483 AKCGCINDANRVFDSMHTRDVIT-WTALIMGCAQNGK 518
            + G ++ A     +M  +  I+ W AL+  C  +GK
Sbjct: 460 GRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGK 496



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 130/470 (27%), Positives = 213/470 (45%), Gaps = 35/470 (7%)

Query: 51  EIDEAGQLFEKMSDRDGFTWNTMIAA-----YANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +I   G+    ++ + G  ++  +       Y  +G   +A  +F+E P +N  TW++ I
Sbjct: 122 QIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYI 181

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                    ++A   F +       P+  T    L  C     L  G Q H + ++  + 
Sbjct: 182 SNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYK 241

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            +  V  GL+D Y KC  I  AE +F    + KN V+W +M+    QN    +A   F  
Sbjct: 242 EDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQ 301

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
            R E VE   F   S+L+ACA +   + G  VH   + +  E N++V SAL+DMY KCG 
Sbjct: 302 ARKE-VEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGS 360

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH--ARDIKIDDFTYPSVL 343
           +++A ++       N V+WN+MI G+A QG    AL LF++M   +  I+    T  S+L
Sbjct: 361 IENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISIL 420

Query: 344 N-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV 402
           + C          +   S+ +  G E        ++D+  + G +D A+     M  +  
Sbjct: 421 SVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPT 480

Query: 403 IS-WTSLITGCAYHGSYE----EALKYFS-DMRISGICPDHVVVSSILSACA---ELTVL 453
           IS W +L+  C  HG  E     A K F  D   SG   +HVV+S++L++     E TV+
Sbjct: 481 ISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSG---NHVVLSNMLASAGRWEEATVV 537

Query: 454 EFGQQVHAVFLKSG-GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
              +++  + +K   G S ++V N + +  AK           DS H R+
Sbjct: 538 R--KEMKDIGIKKNVGYSWIAVKNRIHVFQAK-----------DSSHDRN 574



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 15/204 (7%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF----- 95
           ALVD +   G I+ A Q+F ++ +R+  TWN MI  YA+ G +  A +LF E        
Sbjct: 350 ALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGI 409

Query: 96  -KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGE 153
             ++ T  S++   S  G      ++F  M+L  G  P       V+ L    GL+ R  
Sbjct: 410 RPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAY 469

Query: 154 QF-HGYAIKTCFDLNAFVVTGLVDMYAKCKC-IFEAEYLFKM-FPDGKNHVAWTTMITGY 210
           +F    AI+    +   ++ G   M+ K +     AE LF++   D  NHV  + M+   
Sbjct: 470 EFIQNMAIQPTISVWGALL-GACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNML--- 525

Query: 211 SQNGYGFKAIECFRDMRVEGVESN 234
           +  G   +A    ++M+  G++ N
Sbjct: 526 ASAGRWEEATVVRKEMKDIGIKKN 549


>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
 gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
          Length = 706

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 251/675 (37%), Positives = 390/675 (57%), Gaps = 10/675 (1%)

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
            V++ C+  G L  G + H    +     + +V   LV MY KC  + EA  +F+  P  
Sbjct: 39  RVIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATP-A 97

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDF---G 254
           KN  +WT +IT  +Q+G   +A+  F +M  +G++ +  +F + + AC+A    +F   G
Sbjct: 98  KNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSA--GPEFLPAG 155

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
             +H  +   GF+  V   ++L+ MY+KCG L+ + +  E     N VSWN+MI  FA  
Sbjct: 156 RALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEH 215

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
               EAL   +KM    I+    TY ++++ +     L +A+ +H  I++TGF+  + V 
Sbjct: 216 RRGLEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFD--QDVV 273

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           N +++MY K G L  A  +F  M   DVI+W ++I   + HG   EAL+++  M+  G+ 
Sbjct: 274 NVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVV 333

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           PD     S++ ACA L  +E G+QVH   L         + NSLV +Y KCG ++ A  +
Sbjct: 334 PDDYTYVSVIDACATLGDMEVGKQVHRR-LGDRAFQVTELANSLVNMYGKCGILDVARSI 392

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
           FD    +  +TW A+I   AQ+   ++A + +  M   G +P YITF+ +L AC++AGL 
Sbjct: 393 FDKT-AKGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSACANAGLP 451

Query: 555 ENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
           E A  YF  M + +G++PG  HY CM++ LG++G+L +A+AL+  M  EPD   W + L+
Sbjct: 452 EEAHSYFVCMQQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSFLA 511

Query: 615 ACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
            CR HGD++ G+ AA     ++P  +  YV L+ +++ AG +++A+R+RKLM  RGIRK 
Sbjct: 512 NCRSHGDMKRGKFAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLMLDRGIRKN 571

Query: 675 PGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGK 734
            G S ++  + V+ F + D+ +P   +I+ ++  +   +K AGY PDM    H+VE   K
Sbjct: 572 AGRSIIKLGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKRAGYDPDMTHVAHDVEAGQK 631

Query: 735 EIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNR 794
           E  L  HSE+LA+AFG+++  QG P+RI KNLRVCGDCH   K  S +  R II+RDSNR
Sbjct: 632 EPLLFAHSERLAIAFGIISTSQGTPLRIMKNLRVCGDCHAMTKLTSKITRREIIVRDSNR 691

Query: 795 FHHFKAGNCSCGDYW 809
           FHHFK G+CSC D+W
Sbjct: 692 FHHFKNGSCSCKDFW 706



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 226/466 (48%), Gaps = 24/466 (5%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +  N ++  Y   G L EA+ +F  TP KN F+W+ LI   + +G   EA  LF++M 
Sbjct: 68  DVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALALFYEML 127

Query: 126 LEGYRPSQYTLDNVLRLCSL-KGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
            +G +P   +    +  CS     L  G   H    +  F       T LV MY+KC  +
Sbjct: 128 KQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSL 187

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            E+   F+   +  N V+W  MI  ++++  G +A+   + M +EG+ +   T+ ++++A
Sbjct: 188 EESVKTFESMTE-LNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSVTYITLMSA 246

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
               S       +H CIL +GF+ +V   + +++MY KCG L  A  + +     + ++W
Sbjct: 247 YDQPSQLKSARYIHDCILRTGFDQDVV--NVILNMYGKCGCLQDAEAMFKSMSQPDVIAW 304

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N+MI  +++ G   EAL  ++ M    +  DD+TY SV++  A+  D+   K VH  +  
Sbjct: 305 NTMIAAYSQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQVHRRLGD 364

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
             F+  +  N+ L++MY K G LD A  +F+    K  ++W ++I   A H   ++A + 
Sbjct: 365 RAFQVTELANS-LVNMYGKCGILDVARSIFD-KTAKGSVTWNAMIGAYAQHSHEQQAFEL 422

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFG-------QQVHAVFLKSG--GCSSLSVD 475
           F  MR+ G  P ++   S+LSACA   + E         QQ H V    G  GC      
Sbjct: 423 FLLMRLDGEEPSYITFMSVLSACANAGLPEEAHSYFVCMQQDHGVRPGGGHYGC------ 476

Query: 476 NSLVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMGCAQNGKGK 520
             +V    K G ++DA  +   M    DV+TWT+ +  C  +G  K
Sbjct: 477 --MVESLGKAGRLSDAEALIQGMPFEPDVLTWTSFLANCRSHGDMK 520



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 173/377 (45%), Gaps = 46/377 (12%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +S  G ++E+ + FE M++ +  +WN MIAA+A   R                       
Sbjct: 181 YSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRR----------------------- 217

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                    +EA     +M LEG R    T   ++        L+     H   ++T FD
Sbjct: 218 --------GLEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFD 269

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            +  VV  +++MY KC C+ +AE +FK      + +AW TMI  YSQ+G+  +A+  +  
Sbjct: 270 QD--VVNVILNMYGKCGCLQDAEAMFKSMSQ-PDVIAWNTMIAAYSQHGHTSEALRFYEL 326

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M+ EGV  + +T+ S++ ACA +   + G QVH  +    F+      S L++MY KCG 
Sbjct: 327 MQEEGVVPDDYTYVSVIDACATLGDMEVGKQVHRRLGDRAFQVTELANS-LVNMYGKCGI 385

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           LD AR + + +     V+WN+MI  +A+    ++A  LF  M     +    T+ SVL+ 
Sbjct: 386 LDVARSIFDKTA-KGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSA 444

Query: 346 FASNIDLNNAKSVHSLI-----VKTGFEGYKFVNNALIDMYAKQGNL-DCAFMVFNLMQD 399
            A+      A S    +     V+ G   Y      +++   K G L D   ++  +  +
Sbjct: 445 CANAGLPEEAHSYFVCMQQDHGVRPGGGHY----GCMVESLGKAGRLSDAEALIQGMPFE 500

Query: 400 KDVISWTSLITGCAYHG 416
            DV++WTS +  C  HG
Sbjct: 501 PDVLTWTSFLANCRSHG 517



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 139/352 (39%), Gaps = 46/352 (13%)

Query: 23  ARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSG 81
           ARY H+         D+   +++ +   G + +A  +F+ MS  D   WNTMIAAY    
Sbjct: 256 ARYIHDCILRTGFDQDVVNVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAY---- 311

Query: 82  RLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLR 141
                                      S +G   EA   +  MQ EG  P  YT  +V+ 
Sbjct: 312 ---------------------------SQHGHTSEALRFYELMQEEGVVPDDYTYVSVID 344

Query: 142 LCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHV 201
            C+  G ++ G+Q H       F +   +   LV+MY KC  +  A  +F      K  V
Sbjct: 345 ACATLGDMEVGKQVHRRLGDRAFQVTE-LANSLVNMYGKCGILDVARSIFD--KTAKGSV 401

Query: 202 AWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI 261
            W  MI  Y+Q+ +  +A E F  MR++G E +  TF S+L+ACA     +       C+
Sbjct: 402 TWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSACANAGLPEEAHSYFVCM 461

Query: 262 LSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV-SWNSMIVGFARQGFHKE 319
               G          +++   K G L  A  L++    + +V +W S +      G  K 
Sbjct: 462 QQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSFLANCRSHGDMKR 521

Query: 320 ALSLFKKMHARD-IKID---DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
                 K  A+  I+ID      Y ++    A   D   A  +  L++  G 
Sbjct: 522 G-----KFAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLMLDRGI 568



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 121/287 (42%), Gaps = 39/287 (13%)

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           + L+    + G +  A       +D D+     +I  CA  G+  E              
Sbjct: 7   STLLSKRQQLGQIAAAIDALQKRKDADLKECVRVIQSCARLGALAE-------------- 52

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
                                G+++H +  + G  S + V N LV++Y KCG + +A  V
Sbjct: 53  ---------------------GRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLV 91

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
           F++   ++V +WT LI  CAQ+G+ +EAL  + +ML +G +P  ++F   + ACS     
Sbjct: 92  FEATPAKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEF 151

Query: 555 ENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
             A     ++ + YG +        ++ +  + G L E+    + M  E +A  W A+++
Sbjct: 152 LPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMT-ELNAVSWNAMIA 210

Query: 615 ACRVHGDLELGERAANNLFELEPMNA--MPYVQLSNMYSTAGKWEDA 659
           A   H       R    +F LE + A  + Y+ L + Y    + + A
Sbjct: 211 AFAEHRRGLEALRTLQKMF-LEGIRACSVTYITLMSAYDQPSQLKSA 256


>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 250/652 (38%), Positives = 379/652 (58%), Gaps = 3/652 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAF--ELFWQMQLEG 128
           N++I  YA    L +AK +F+    K+  +W+ LI GYS  G    +F  ELF +M+ + 
Sbjct: 47  NSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADN 106

Query: 129 YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
             P+ +T   +    S    +  G+Q H  AIK     + FV + L++MY K   +FEA 
Sbjct: 107 ILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAR 166

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
            +F   P+ +N V W TMI+GY+      +A E F  MR E  + N+F F S+L+A A  
Sbjct: 167 EVFDRMPE-RNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVP 225

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
              D G Q+H   + +G    + + +AL+ MYAKCG LD + ++ E S   N ++W++MI
Sbjct: 226 EFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMI 285

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
            G+A+ G   +AL LF +MH   I   +FT   VLN  +    +   K VH+ ++K GFE
Sbjct: 286 TGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFE 345

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
              ++  AL+DMYAK G  + A   FN +Q  D++ WTS+I G   +G  E+AL  +  M
Sbjct: 346 SQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRM 405

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
           ++ GI P+ + ++S+L AC+ L   + G+Q+HA  +K G    +++ ++L  +YAKCG +
Sbjct: 406 QMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNL 465

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
            + N VF  M  RD+I+W A+I G +QNG GKEAL+ +++M  + TKPD +TFV +L AC
Sbjct: 466 EEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSAC 525

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           SH GL ++   YF  M   +G+ P  +HYACM+D+L R+GKL EAK  ++    +    +
Sbjct: 526 SHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCL 585

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           W+ LL ACR + + ELG  A   L EL    +  YV LS +Y+  G+ ED  RVR +MK 
Sbjct: 586 WRILLGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSGIYTALGRPEDVERVRSMMKV 645

Query: 669 RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
           RG+ KEPGCSW+E  S VH+F+  D+ HP   +I ++I  +   +K+ GY P
Sbjct: 646 RGVSKEPGCSWIELKSNVHVFVVGDQMHPCIGEIRTEILRLSKQMKDEGYQP 697



 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 161/497 (32%), Positives = 259/497 (52%), Gaps = 9/497 (1%)

Query: 149 LQRGEQFHGYAIKTCFDLNA-FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
           LQ+G   H   IK     +  ++   L++ YAKC  + +A+ +F    + K+ ++W  +I
Sbjct: 23  LQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHN-KDVISWNCLI 81

Query: 208 TGYSQNGYGFKA--IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
            GYSQ G    +  +E F+ MR + +  N  TF  I TA + +S+  FG Q H   +   
Sbjct: 82  NGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMA 141

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
              +V+V S+L++MY K G L  AR + +     NEV+W +MI G+A Q    EA  +F+
Sbjct: 142 CFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFE 201

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
            M   +  +++F + SVL+  A    +++ K +H L VKTG   +  + NAL+ MYAK G
Sbjct: 202 LMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCG 261

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
           +LD +  VF +  DK+ I+W+++ITG A  G   +ALK FS M  +GI P    +  +L+
Sbjct: 262 SLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLN 321

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
           AC++   +E G+QVH   LK G  S L +  +LV +YAK G   DA + F+ +   D++ 
Sbjct: 322 ACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVL 381

Query: 506 WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMD 565
           WT++I G  QNG+ ++AL  Y +M   G  P+ +T   +L ACS+    +  R       
Sbjct: 382 WTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTI 441

Query: 566 KVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELG 625
           K YG+       + +  +  + G L E   +  +M  E D   W A++S    +G    G
Sbjct: 442 K-YGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRM-PERDIISWNAMISGLSQNG---YG 496

Query: 626 ERAANNLFELEPMNAMP 642
           + A     E+   +  P
Sbjct: 497 KEALELFEEMRQQDTKP 513



 Score =  260 bits (664), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 157/513 (30%), Positives = 275/513 (53%), Gaps = 9/513 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  ++++  Y  +G L EA+++F+  P +N  TW+++I GY+   L  EAFE+F  M+
Sbjct: 145 DVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMR 204

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            E    +++   +VL   ++   +  G+Q H  A+KT   +   ++  LV MYAKC  + 
Sbjct: 205 REEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLD 264

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           ++  +F+M  D KN + W+ MITGY+Q+G   KA++ F  M   G+  ++FT   +L AC
Sbjct: 265 DSLQVFEMSND-KNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNAC 323

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           +   A + G QVH  +L  GFE+ +Y+ +AL+DMYAK G  + AR+   Y +  + V W 
Sbjct: 324 SDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWT 383

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           SMI G+ + G +++ALSL+ +M    I  ++ T  SVL   ++    +  + +H+  +K 
Sbjct: 384 SMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKY 443

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G      + +AL  MYAK GNL+   +VF  M ++D+ISW ++I+G + +G  +EAL+ F
Sbjct: 444 GLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELF 503

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFG-QQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
            +MR     PD V   ++LSAC+ + +++ G      +F + G    +     +V V ++
Sbjct: 504 EEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSR 563

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFY-DQMLARGTKPD--YITF 541
            G + +A    +S      +    +++G  +N +  E   +  ++++  G++    Y+  
Sbjct: 564 AGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYVLL 623

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
            G+  A       E  R    SM KV G+   P
Sbjct: 624 SGIYTALGRPEDVERVR----SMMKVRGVSKEP 652



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 133/470 (28%), Positives = 216/470 (45%), Gaps = 72/470 (15%)

Query: 37  SDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK 96
           S LN  +  ++  G +D++ Q+FE  +D++  TW+ MI  YA SG   +A KLF+     
Sbjct: 248 SILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFS----- 302

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
                                     +M   G  PS++TL  VL  CS    ++ G+Q H
Sbjct: 303 --------------------------RMHFAGINPSEFTLVGVLNACSDACAVEEGKQVH 336

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
            Y +K  F+   +++T LVDMYAK     +A   F  +    + V WT+MI GY QNG  
Sbjct: 337 NYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFN-YLQQPDLVLWTSMIAGYVQNGEN 395

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
             A+  +  M++EG+  N+ T  S+L AC+ ++A D G Q+H   +  G    V + SAL
Sbjct: 396 EDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSAL 455

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
             MYAKCG+L+    +       + +SWN+MI G ++ G+ KEAL LF++M  +D K DD
Sbjct: 456 STMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDD 515

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN--ALIDMYAKQGNL-DCAFMV 393
            T+ +VL+   S++ L ++  ++  ++   F     V +   ++D+ ++ G L +    +
Sbjct: 516 VTFVNVLSA-CSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFI 574

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
            +   D  +  W  L+  C  + +YE                        L A A   ++
Sbjct: 575 ESTTIDHGLCLWRILLGACRNYRNYE------------------------LGAYAGEKLM 610

Query: 454 EFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDV 503
           E G Q  + ++   G            +Y   G   D  RV   M  R V
Sbjct: 611 ELGSQESSAYVLLSG------------IYTALGRPEDVERVRSMMKVRGV 648



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 19/296 (6%)

Query: 339 YPSVLNCFASNIDLNNAKSV------HSLIVKTGFEGY-KFVNNALIDMYAKQGNLDCAF 391
           +P  L+ F S +   + KS+      H+ I+K        ++ N+LI+ YAK  +L  A 
Sbjct: 4   HPQNLSSFNSLVQFTHQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAK 63

Query: 392 MVFNLMQDKDVISWTSLITGCAYHGSYEEA--LKYFSDMRISGICPDHVVVSSILSACAE 449
           +VF+ + +KDVISW  LI G +  G    +  ++ F  MR   I P+    S I +A + 
Sbjct: 64  LVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASN 123

Query: 450 LTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTAL 509
           L+ + FGQQ HAV +K      + V +SL+ +Y K G + +A  VFD M  R+ +TW  +
Sbjct: 124 LSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATM 183

Query: 510 IMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG 569
           I G A      EA + ++ M       +   F  +L A +     ++ +           
Sbjct: 184 ISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQI-----HCLA 238

Query: 570 IKPGPDHYACMIDLL----GRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGD 621
           +K G   +  +++ L     + G L ++  + + M  + ++  W A+++     GD
Sbjct: 239 VKTGLLVFLSILNALVTMYAKCGSLDDSLQVFE-MSNDKNSITWSAMITGYAQSGD 293


>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Vitis vinifera]
          Length = 751

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 254/639 (39%), Positives = 379/639 (59%), Gaps = 6/639 (0%)

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
           L+D Y KC  +  A  +F   P  ++ VAW +MI  Y +NG   +AI+ ++ M  +G+  
Sbjct: 116 LIDAYLKCGSVVYARKVFDEVPH-RHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILP 174

Query: 234 NQFTFPSILTACAAVSARDFGAQVHG--CILSSGFEANVYVQSALIDMYAKCGDLDSARR 291
           ++FTF S+  A + +     G + HG   +L  G  +NV+V SAL+DMYAK G +  AR 
Sbjct: 175 DEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGV-SNVFVGSALVDMYAKFGKMRDARL 233

Query: 292 LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID 351
           + +     + V + ++IVG++  G   E+L +F+ M  + I+ +++T  SVL C  +  D
Sbjct: 234 VSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLED 293

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
           L + + +H LIVK G E       +L+ MY + G +D +  VF    + + ++WTS+I G
Sbjct: 294 LTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVG 353

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
              +G  E AL  F  M  S I P+   +SS+L AC+ L +LE G+Q+HA+ +K G    
Sbjct: 354 LVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDID 413

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
             V  +L+  Y KCG    A  VF+ +   DV++  ++I   AQNG G EALQ +  M  
Sbjct: 414 KYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKD 473

Query: 532 RGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLI 591
            G +P+ +T++G+L AC++AGL E     F S      I+   DHYACM+DLLGR+G+L 
Sbjct: 474 TGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLK 533

Query: 592 EAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYS 651
           EA+ L++Q V   D  +W+ LLSACR+HGD+E+ +R  N + +L P +   +V LSN+Y+
Sbjct: 534 EAEMLINQ-VNISDVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYA 592

Query: 652 TAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIML 711
           + G W     ++  M+   ++K P  SWV+   ++H F++ D  HP   DI  K++E++ 
Sbjct: 593 STGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIE 652

Query: 712 LIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGL-LTLPQGAPIRIFKNLRVCG 770
            +KE GYVPD  F L +++EE K   L YHSEKLAVAF L  +  +   IRI KNLRVCG
Sbjct: 653 KVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCG 712

Query: 771 DCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           DCHT MK++S +  R II RD  RFHHF+ G CSCGDYW
Sbjct: 713 DCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDYW 751



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 146/463 (31%), Positives = 256/463 (55%), Gaps = 5/463 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +I AY   G +  A+K+F+E P ++   W+S+I  Y   G   EA +++ +M  +G  
Sbjct: 114 NKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGIL 173

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDL-NAFVVTGLVDMYAKCKCIFEAEY 189
           P ++T  +V +  S  GL+  G++ HG ++     + N FV + LVDMYAK   + +A  
Sbjct: 174 PDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARL 233

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +      GK+ V +T +I GYS +G   ++++ FR+M  +G+E+N++T  S+L  C  + 
Sbjct: 234 VSDQVV-GKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLE 292

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
               G  +HG I+ +G E+ V  Q++L+ MY +CG +D + ++ +     N+V+W S+IV
Sbjct: 293 DLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIV 352

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           G  + G  + AL  F++M    I  + FT  SVL   +S   L   K +H++++K G + 
Sbjct: 353 GLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDI 412

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
            K+V  ALID Y K G+ + A  VFN + + DV+S  S+I   A +G   EAL+ FS M+
Sbjct: 413 DKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMK 472

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLVLVYAKCGC 487
            +G+ P++V    +LSAC    +LE G  + +    SG    L+ D+   +V +  + G 
Sbjct: 473 DTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNI-ELTKDHYACMVDLLGRAGR 531

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
           + +A  + + ++  DV+ W  L+  C  +G  + A +  ++++
Sbjct: 532 LKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVMNRVI 574



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/405 (30%), Positives = 209/405 (51%), Gaps = 11/405 (2%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  + ++  YA  G++R+A+ + ++   K+   +++LI GYS++G D E+ ++F  M  +
Sbjct: 213 FVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKK 272

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G   ++YTL +VL  C     L  G   HG  +K   +      T L+ MY +C  + ++
Sbjct: 273 GIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDS 332

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +FK F +  N V WT++I G  QNG    A+  FR M    +  N FT  S+L AC++
Sbjct: 333 LKVFKQFIN-PNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSS 391

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE-YSEIDNEVSWNS 306
           ++  + G Q+H  ++  G + + YV +ALID Y KCG  + AR +     E+D  VS NS
Sbjct: 392 LAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVD-VVSVNS 450

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           MI  +A+ GF  EAL LF  M    ++ ++ T+  VL+   +   L     + S    +G
Sbjct: 451 MIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSG 510

Query: 367 -FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
             E  K     ++D+  + G L  A M+ N +   DV+ W +L++ C  HG  E A +  
Sbjct: 511 NIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVM 570

Query: 426 SDMRISGICPD----HVVVSSILSACAELT-VLEFGQQVHAVFLK 465
           +  R+  + P+    HV++S++ ++    + V+E    +  + LK
Sbjct: 571 N--RVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLK 613



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 137/275 (49%), Gaps = 5/275 (1%)

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
           + +   + S  +K GF  +  + N LID Y K G++  A  VF+ +  + +++W S+I  
Sbjct: 93  ITDITKIQSHALKRGF--HHSLGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIAS 150

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG-GCS 470
              +G  +EA+  +  M   GI PD    SS+  A ++L ++  GQ+ H   +  G G S
Sbjct: 151 YIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVS 210

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
           ++ V ++LV +YAK G + DA  V D +  +DV+ +TALI+G + +G+  E+LQ +  M 
Sbjct: 211 NVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMT 270

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKL 590
            +G + +  T   +L  C +     + R     + K  G++        ++ +  R G +
Sbjct: 271 KKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKA-GLESAVASQTSLLTMYYRCGLV 329

Query: 591 IEAKALLDQMVGEPDATVWKALLSACRVHGDLELG 625
            ++  +  Q +  P+   W +++     +G  E+ 
Sbjct: 330 DDSLKVFKQFI-NPNQVTWTSVIVGLVQNGREEIA 363



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 110/214 (51%), Gaps = 14/214 (6%)

Query: 417 SYEEALKYFS--DMRISGICPDHVV-----VSSILSACAELTVLEFGQQVHAVFLKSGGC 469
           ++ ++L +FS  +++I  +C    +      SS++  C  +  +    ++ +  LK G  
Sbjct: 50  AFFKSLSHFSQSNIKIRKLCITETIQSTKLYSSLIQQCIGIKSITDITKIQSHALKRGFH 109

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
            SL   N L+  Y KCG +  A +VFD +  R ++ W ++I    +NG+ KEA+  Y +M
Sbjct: 110 HSLG--NKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRM 167

Query: 530 LARGTKPDYITFVGLLFACSHAGLA-ENARWYFESMDKVYGIKPGPDHY-ACMIDLLGRS 587
           +  G  PD  TF  +  A S  GL  E  R + +S+  V G+        + ++D+  + 
Sbjct: 168 VPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSV--VLGVGVSNVFVGSALVDMYAKF 225

Query: 588 GKLIEAKALLDQMVGEPDATVWKALLSACRVHGD 621
           GK+ +A+ + DQ+VG+ D  ++ AL+     HG+
Sbjct: 226 GKMRDARLVSDQVVGK-DVVLFTALIVGYSHHGE 258



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 2/152 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D +    +I  Y   G    A+ +FN     +  + +S+IY Y+  G   EA +LF  
Sbjct: 411 DIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSG 470

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC-FDLNAFVVTGLVDMYAKCK 182
           M+  G  P+  T   VL  C+  GLL+ G      A  +   +L       +VD+  +  
Sbjct: 471 MKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAG 530

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
            + EAE L     +  + V W T+++    +G
Sbjct: 531 RLKEAEMLINQV-NISDVVIWRTLLSACRIHG 561


>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 701

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 255/665 (38%), Positives = 382/665 (57%), Gaps = 5/665 (0%)

Query: 149 LQRGEQFHGYAIKT-CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
           L +  Q H +         N ++ T L   YA C  +  A+++F      KN   W +MI
Sbjct: 38  LTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVL-KNSFLWNSMI 96

Query: 208 TGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFE 267
            GY+ N    +A+  +  M   G + + FT+P +L AC  +  R+ G +VH  ++  G E
Sbjct: 97  RGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLE 156

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM 327
            +VYV ++++ MY K GD+++AR + +   + +  SWN+M+ GF + G  + A  +F  M
Sbjct: 157 EDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDM 216

Query: 328 HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY---KFVNNALIDMYAKQ 384
                  D  T  ++L+     +DL   K +H  +V+ G  G     F+ N++IDMY   
Sbjct: 217 RRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNC 276

Query: 385 GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
            ++ CA  +F  ++ KDV+SW SLI+G    G   +AL+ F  M + G  PD V V S+L
Sbjct: 277 ESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVL 336

Query: 445 SACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVI 504
           +AC +++ L  G  V +  +K G   ++ V  +L+ +YA CG +  A RVFD M  +++ 
Sbjct: 337 AACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLP 396

Query: 505 TWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESM 564
             T ++ G   +G+G+EA+  + +ML +G  PD   F  +L ACSH+GL +  +  F  M
Sbjct: 397 ACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKM 456

Query: 565 DKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLEL 624
            + Y ++P P HY+C++DLLGR+G L EA A+++ M  +P+  VW ALLSACR+H +++L
Sbjct: 457 TRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKL 516

Query: 625 GERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNS 684
              +A  LFEL P     YV LSN+Y+   +WED   VR L+  R +RK P  S+VE N 
Sbjct: 517 AVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVAKRRLRKPPSYSFVELNK 576

Query: 685 QVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEK 744
            VH F   D  H    DIY+K+ ++   +K+AGY PD +  L++VEEE KE  L  HSE+
Sbjct: 577 MVHQFFVGDTSHEQSDDIYAKLKDLNEQLKKAGYKPDTSLVLYDVEEEIKEKMLWDHSER 636

Query: 745 LAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCS 804
           LA+AF L+    G  IRI KNLRVCGDCHT +K IS +  R II+RD  RFHHF+ G CS
Sbjct: 637 LALAFALINTGPGTTIRITKNLRVCGDCHTVIKMISKLTNREIIMRDICRFHHFRDGLCS 696

Query: 805 CGDYW 809
           CG YW
Sbjct: 697 CGGYW 701



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 141/482 (29%), Positives = 241/482 (50%), Gaps = 13/482 (2%)

Query: 43  LVDFSNSGEIDEAGQLFEKMSD-----RDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           L   +NS  + +A QL   ++      R+ +    + A YA  G +  A+ +F++   KN
Sbjct: 29  LQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLKN 88

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
            F W+S+I GY+       A  L+ +M   G +P  +T   VL+ C    L + G + H 
Sbjct: 89  SFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHA 148

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF-KMFPDGKNHVAWTTMITGYSQNGYG 216
             +    + + +V   ++ MY K   +  A  +F +M    ++  +W TM++G+ +NG  
Sbjct: 149 LVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLV--RDLTSWNTMMSGFVKNGEA 206

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL---SSGFEANVYVQ 273
             A E F DMR +G   ++ T  ++L+AC  V     G ++HG ++    SG   N ++ 
Sbjct: 207 RGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLM 266

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
           +++IDMY  C  +  AR+L E   + + VSWNS+I G+ + G   +AL LF +M      
Sbjct: 267 NSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAV 326

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
            D+ T  SVL        L    +V S +VK G+     V  ALI MYA  G+L CA  V
Sbjct: 327 PDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRV 386

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           F+ M +K++ + T ++TG   HG   EA+  F +M   G+ PD  + +++LSAC+   ++
Sbjct: 387 FDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLV 446

Query: 454 EFGQQVHAVFLKSGGCSSLSVDNS-LVLVYAKCGCINDANRVFDSMHTR-DVITWTALIM 511
           + G+++     +           S LV +  + G +++A  V ++M  + +   WTAL+ 
Sbjct: 447 DEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLS 506

Query: 512 GC 513
            C
Sbjct: 507 AC 508



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 148/303 (48%), Gaps = 8/303 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           +GF  N++I  Y N   +  A+KLF     K+  +W+SLI GY   G   +A ELF +M 
Sbjct: 262 NGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMV 321

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           + G  P + T+ +VL  C+    L+ G     Y +K  + +N  V T L+ MYA C  + 
Sbjct: 322 VVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLV 381

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A  +F   P+ KN  A T M+TG+  +G G +AI  F +M  +GV  ++  F ++L+AC
Sbjct: 382 CACRVFDEMPE-KNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSAC 440

Query: 246 AAVSARDFGAQV-HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEVS 303
           +     D G ++ +        E      S L+D+  + G LD A  ++E  ++  NE  
Sbjct: 441 SHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDV 500

Query: 304 WNSMIVGFARQGFHKEA-LSLFKKMHARDIKIDDFT-YPSVLNCFASNIDLNNAKSVHSL 361
           W +++        H+   L++       ++  D  + Y  + N +A+     + ++V +L
Sbjct: 501 WTALLSACR---LHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRAL 557

Query: 362 IVK 364
           + K
Sbjct: 558 VAK 560


>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Vitis vinifera]
          Length = 703

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 273/771 (35%), Positives = 411/771 (53%), Gaps = 88/771 (11%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  ++  G+I+ A ++F++M D+   +WN+M+A Y  + R REA+ LF++ P +N  
Sbjct: 20  NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPERNTV 79

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           +W+ LI GY    +  EA + F                                      
Sbjct: 80  SWNGLISGYVKNRMVSEARKAF-------------------------------------- 101

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
             T  + N    T +V  Y +   + EAE LF   P+ KN V+WT M+ G  Q     +A
Sbjct: 102 -DTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPE-KNVVSWTVMLGGLIQVRRIDEA 159

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
              F  M V+ V +                AR+   ++           NV   + +I  
Sbjct: 160 RGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFDEMP--------RRNVISWTTMISG 211

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           Y + G +D AR+L E     NEVSW +M++G+ + G  +EA  LF  M  +         
Sbjct: 212 YVQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEASELFDAMPVK--------- 262

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
            +V+ C                             NA+I  + + G +  A  VF+ +++
Sbjct: 263 -AVVAC-----------------------------NAMILGFGQNGEVAKARQVFDQIRE 292

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           KD  +W+++I      G   EAL  F+ M+  G+  +   + S+LS CA L  L+ G+QV
Sbjct: 293 KDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQV 352

Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKG 519
           HA  +KS   S + V + L+ +Y KCG +  A ++FD    +D++ W ++I G AQ+G  
Sbjct: 353 HAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLV 412

Query: 520 KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC 579
           +EALQ + +M + G   D +TFVG+L ACS+ G  +     FESM   Y ++P  +HYAC
Sbjct: 413 EEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYAC 472

Query: 580 MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMN 639
           M+DLLGR+G + +A  L+ +M  E DA +W ALL ACR H ++ L E AA  L +LEP N
Sbjct: 473 MVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKN 532

Query: 640 AMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISE-DRGHPL 698
           A PY+ LSN+Y++ G+W D A +R+ M+ + + K PGCSW+E   +VH+F       HP 
Sbjct: 533 AGPYILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTKHPE 592

Query: 699 RTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA 758
            + I   ++++  +++EAGY PD +F LH+V+EE K   L +HSE+LAVAFGLL +P+G 
Sbjct: 593 LSSIMKMLEKLDGMLREAGYYPDSSFVLHDVDEEEKVRSLGHHSERLAVAFGLLKVPEGM 652

Query: 759 PIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           PIR+ KNLRVCGDCH+A+K I+ +  R IILRD+NRFHHFK G CSC DYW
Sbjct: 653 PIRVMKNLRVCGDCHSAIKLIAKITGREIILRDANRFHHFKDGFCSCRDYW 703



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 132/504 (26%), Positives = 230/504 (45%), Gaps = 67/504 (13%)

Query: 67  GFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELF----- 121
              +N+ IA YA  G++  A+++F+E P K   +W+S++ GY       EA  LF     
Sbjct: 16  AIAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPE 75

Query: 122 -----WQMQLEGYRPSQYTLD-----------NVLRLCSL-KGLLQRGEQFHGYAI---- 160
                W   + GY  ++   +           NV+   ++ +G +Q G       +    
Sbjct: 76  RNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQM 135

Query: 161 ------------------------KTCFDL----NAFVVTGLVDMYAKCKCIFEAEYLFK 192
                                   +  FD+    +    T ++  Y +   + EA  LF 
Sbjct: 136 PEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFD 195

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
             P  +N ++WTTMI+GY QNG    A + F  M     E N+ ++ ++L         +
Sbjct: 196 EMPR-RNVISWTTMISGYVQNGQVDVARKLFEVMP----EKNEVSWTAMLMGYTQGGRIE 250

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
             +++   +        V   +A+I  + + G++  AR++ +     ++ +W++MI  + 
Sbjct: 251 EASELFDAMPVKA----VVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYE 306

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
           R+GF  EAL+LF  M    ++ +  +  SVL+  AS   L++ + VH+ +VK+ F+   F
Sbjct: 307 RKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVF 366

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           V + LI MY K G+L  A  +F+    KD++ W S+ITG A HG  EEAL+ F +M  SG
Sbjct: 367 VASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSG 426

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLVLVYAKCGCIND 490
           +  D V    +LSAC+    ++ G ++    +KS        ++   +V +  + G +ND
Sbjct: 427 MATDGVTFVGVLSACSYTGKVKEGLEIFES-MKSKYLVEPKTEHYACMVDLLGRAGLVND 485

Query: 491 ANRVFDSMHTR-DVITWTALIMGC 513
           A  +   M    D I W AL+  C
Sbjct: 486 AMDLIQKMPVEADAIIWGALLGAC 509



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 133/278 (47%), Gaps = 34/278 (12%)

Query: 33  VKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE 92
           VK     N  ++ F  +GE+ +A Q+F+++ ++D  TW+ MI  Y               
Sbjct: 261 VKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERK------------ 308

Query: 93  TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
                              G ++EA  LF  MQ EG + +  +L +VL +C+    L  G
Sbjct: 309 -------------------GFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHG 349

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
            Q H   +K+ FD + FV + L+ MY KC  + +A  +F  F   K+ V W ++ITGY+Q
Sbjct: 350 RQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSP-KDIVMWNSIITGYAQ 408

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF-EANVY 271
           +G   +A++ F +M   G+ ++  TF  +L+AC+       G ++   + S    E    
Sbjct: 409 HGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTE 468

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
             + ++D+  + G ++ A  L++   ++ + + W +++
Sbjct: 469 HYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALL 506



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 84/354 (23%), Positives = 154/354 (43%), Gaps = 46/354 (12%)

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           +++NS I  +AR G  + A  +F +M  + I     ++ S++  +  N   N  +    L
Sbjct: 17  IAYNSQIARYARIGQIESARRVFDEMPDKGI----VSWNSMVAGYFQN---NRPREARYL 69

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
             K   E      N LI  Y K   +  A   F+ M +++V+SWT+++ G    G   EA
Sbjct: 70  FDKMP-ERNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEA 128

Query: 422 LKYFSDMRISGICPDHVVVS--SILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
              F  M      P+  VVS   +L    ++  ++  + +  +         +    +++
Sbjct: 129 ETLFWQM------PEKNVVSWTVMLGGLIQVRRIDEARGLFDIM----PVKDVVARTNMI 178

Query: 480 LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
             Y + G + +A  +FD M  R+VI+WT +I G  QNG+   A + ++ M     + + +
Sbjct: 179 SGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVM----PEKNEV 234

Query: 540 TFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC--MIDLLGRSGKLIEAKALL 597
           ++  +L   +  G  E A   F++M       P     AC  MI   G++G++ +A+ + 
Sbjct: 235 SWTAMLMGYTQGGRIEEASELFDAM-------PVKAVVACNAMILGFGQNGEVAKARQVF 287

Query: 598 DQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYS 651
           DQ + E D   W A++      G            FE+E +N    +Q   + S
Sbjct: 288 DQ-IREKDDGTWSAMIKVYERKG------------FEVEALNLFALMQREGVQS 328



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 24/209 (11%)

Query: 469 CSSLSVD-NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYD 527
           C+S+++  NS +  YA+ G I  A RVFD M  + +++W +++ G  QN + +EA   +D
Sbjct: 12  CTSVAIAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFD 71

Query: 528 QMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRS 587
           +M  R T    +++ GL+       +   AR  F++M +   +      +  M+    + 
Sbjct: 72  KMPERNT----VSWNGLISGYVKNRMVSEARKAFDTMPERNVVS-----WTAMVRGYVQE 122

Query: 588 GKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGER--AANNLFELEPMNAMPYVQ 645
           G + EA+ L  QM  E +   W  +L      G L    R   A  LF++ P+  +  V 
Sbjct: 123 GLVSEAETLFWQM-PEKNVVSWTVML------GGLIQVRRIDEARGLFDIMPVKDV--VA 173

Query: 646 LSNM---YSTAGKWEDAARVRKLMKSRGI 671
            +NM   Y   G+  +A  +   M  R +
Sbjct: 174 RTNMISGYCQEGRLAEARELFDEMPRRNV 202


>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Vitis vinifera]
          Length = 882

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 267/776 (34%), Positives = 417/776 (53%), Gaps = 39/776 (5%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +I AY   G +  A K+F      N  +++++I G++    + +A E+F++M+  G  
Sbjct: 109 NALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIE 168

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            ++++   +L +C     L+ G Q H   IK  F    FV   L+ +Y KC  +     L
Sbjct: 169 LNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQL 228

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR-VEGVESNQFTFPSILTACAAVS 249
           F   P  ++  +W T+I+   +     +A E FRDMR ++G   + FT  +IL A   ++
Sbjct: 229 FDEMPH-RDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLA 287

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
           +   G ++H  ++  GFE+N+ V +ALI  Y KCG +     L E   + + ++W  MI 
Sbjct: 288 SM-VGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMIT 346

Query: 310 GFARQGFHKEALSLFKKMHARD-------------------------------IKIDDFT 338
            +   G    AL +F KM AR+                               +++ DFT
Sbjct: 347 AYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFT 406

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA--FMVFNL 396
              VLN     ++   +K +H  I+K GF     +  AL+DM  + G +  A        
Sbjct: 407 LTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGS 466

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG-ICPDHVVVSSILSACAELTVLEF 455
                 I WTS+I G A +   EEA+  F   ++ G +  D V  +++L  C  L   E 
Sbjct: 467 FSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEM 526

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
           G+Q+H   LKSG  S L V NS++ +Y+KC  ++DA +VF+ M   D+++W  LI G   
Sbjct: 527 GKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLL 586

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH--AGLAENARWYFESMDKVYGIKPG 573
           + +G EAL  + +M   G KPD +TFV ++ A  H  + L +N R  F SM  +Y I P 
Sbjct: 587 HRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPT 646

Query: 574 PDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLF 633
            +HY  ++ +LG  G L EA+ ++++M  EP+A+VW+ALL ACR+H +  +G+RAA +L 
Sbjct: 647 VEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKHLL 706

Query: 634 ELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISED 693
            ++P++   Y+ +SN+YS  G+W  +  VR+ M+ +G RK PG SW+   ++VH F + D
Sbjct: 707 AMKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWIIHENKVHSFYARD 766

Query: 694 RGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLT 753
           + HP   DI+S ++ +++   +AGYVPD +F LH VEE  K+  L YHS K+A  +GLL 
Sbjct: 767 KSHPQAKDIHSGLELLIMECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKIAATYGLLM 826

Query: 754 LPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
              G PIRI KN+ +CGDCHT +KY+S V  R I LRD++  H F  G CSC DYW
Sbjct: 827 TRPGRPIRIVKNILLCGDCHTFLKYVSIVTGREIFLRDASGHHCFLNGQCSCKDYW 882



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/415 (31%), Positives = 195/415 (46%), Gaps = 39/415 (9%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM-QL 126
           F  N ++  Y   G L    +LF+E P ++  +W+++I       +   AFELF  M ++
Sbjct: 207 FVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRI 266

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQR-GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           +G+R   +TL  +  L + +GL    G + H + IK  F+ N  V+  L+  Y KC  I 
Sbjct: 267 DGFRIDHFTLSTI--LVAARGLASMVGREIHAHVIKIGFESNISVINALIRFYTKCGSIK 324

Query: 186 EAEYLFKMFPDGKNHVAWTTMIT-------------------------------GYSQNG 214
               LF+     ++ + WT MIT                               G+ QNG
Sbjct: 325 HVVALFEKM-RVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNG 383

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQS 274
            G KA+  F  M  EGVE   FT   +L AC  +       Q+HG IL  GF +N  +++
Sbjct: 384 EGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEA 443

Query: 275 ALIDMYAKCGDLDSARRL--LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD- 331
           AL+DM  +CG +  A+++           + W SMI G+AR    +EA+SLF +      
Sbjct: 444 ALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGA 503

Query: 332 IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
           + +D     +VL    +       K +H   +K+GF     V N++I MY+K  N+D A 
Sbjct: 504 MVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAI 563

Query: 392 MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSA 446
            VFN+M   D++SW  LI G   H   +EAL  +S M  +GI PD V    I+SA
Sbjct: 564 KVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISA 618



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 193/378 (51%), Gaps = 48/378 (12%)

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           VH  I       ++++ +ALI  Y K G + +A ++       N VS+ +MI GFA+   
Sbjct: 94  VHASIFK--LAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNR 151

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
            ++A+ +F +M +  I++++F++ ++L      +DL     +H++++K GF  Y FV+NA
Sbjct: 152 ERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNA 211

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM-RISGICP 435
           L+ +Y K G LD    +F+ M  +D+ SW ++I+       YE A + F DM RI G   
Sbjct: 212 LMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRI 271

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           DH  +S+IL A   L  +  G+++HA  +K G  S++SV N+L+  Y KCG I     +F
Sbjct: 272 DHFTLSTILVAARGLASM-VGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALF 330

Query: 496 DSMHTRDVITWT-------------------------------ALIMGCAQNGKGKEALQ 524
           + M  RDVITWT                               A++ G  QNG+G +AL 
Sbjct: 331 EKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALA 390

Query: 525 FYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPGPDHYAC--- 579
           F+ +M+  G +    T  G+L AC   GL   A+       +++G  +K G    AC   
Sbjct: 391 FFCRMVEEGVELTDFTLTGVLNAC---GLLMEAKIS----KQIHGFILKFGFGSNACIEA 443

Query: 580 -MIDLLGRSGKLIEAKAL 596
            ++D+  R G++ +A+ +
Sbjct: 444 ALLDMCTRCGRMADAQKM 461



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 134/506 (26%), Positives = 235/506 (46%), Gaps = 56/506 (11%)

Query: 1   MFKLD-FKILNFSL-------RCRSKIIGPARYTHNVGNSVKPASDLNRALVDF-SNSGE 51
           M ++D F+I +F+L       R  + ++G   + H +    +    +  AL+ F +  G 
Sbjct: 263 MRRIDGFRIDHFTLSTILVAARGLASMVGREIHAHVIKIGFESNISVINALIRFYTKCGS 322

Query: 52  IDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNY 111
           I     LFEKM  RD  TW  MI AY   G    A ++F++ P +N  ++++++ G+   
Sbjct: 323 IKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQN 382

Query: 112 GLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV 171
           G   +A   F +M  EG   + +TL  VL  C L    +  +Q HG+ +K  F  NA + 
Sbjct: 383 GEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIE 442

Query: 172 TGLVDMYAKCKCIFEAEYL-FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG 230
             L+DM  +C  + +A+ +  +        + WT+MI GY++N    +AI  F   ++EG
Sbjct: 443 AALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEG 502

Query: 231 -VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
            +  ++    ++L  C  ++  + G Q+H   L SGF +++ V +++I MY+KC ++D A
Sbjct: 503 AMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDA 562

Query: 290 RRLLEYSEIDNEVSWNSMIVG--FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFA 347
            ++       + VSWN +I G    RQG   EALS++ KM    IK D  T+  +++   
Sbjct: 563 IKVFNVMPAHDIVSWNGLIAGHLLHRQG--DEALSVWSKMEKAGIKPDTVTFVLIIS--- 617

Query: 348 SNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ----DKDVI 403
                                 Y+  N+ L+D        +C  +  ++      D  V 
Sbjct: 618 ---------------------AYRHTNSNLVD--------NCRRLFLSMKTIYHIDPTVE 648

Query: 404 SWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV--HA 461
            +TSL+    Y G  EEA +  + M I    P+  V  ++L AC   +    G++   H 
Sbjct: 649 HYTSLVGVLGYWGLLEEAEEMINKMPIE---PEASVWRALLDACRIHSNTTIGKRAAKHL 705

Query: 462 VFLKSGGCSSLSVDNSLVLVYAKCGC 487
           + +K    S+  + ++L   Y +  C
Sbjct: 706 LAMKPLDPSTYILVSNLYSAYGRWHC 731



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 56/96 (58%), Gaps = 2/96 (2%)

Query: 453 LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMG 512
           +E  + VHA   K      + + N+L++ Y K G + +A +VF  +   +V+++TA+I G
Sbjct: 88  VELIKAVHASIFKLA--EDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISG 145

Query: 513 CAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
            A++ + ++A++ + +M + G + +  +FV +L  C
Sbjct: 146 FAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVC 181


>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
 gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
          Length = 770

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 261/684 (38%), Positives = 384/684 (56%), Gaps = 15/684 (2%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           +L  C   G L      HG+  KT    + FV T LV+ Y +C    +A  LF   P+ +
Sbjct: 84  LLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPE-R 142

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           N V WT ++TGY+ N      +E F +M   G   + +T  + L AC A    D G QVH
Sbjct: 143 NVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVH 202

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
           G  +  G E+   + ++L  +YAK G LDSA R        N ++W +MI   A      
Sbjct: 203 GYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECV 262

Query: 319 E-ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
           E  +SLF  M    +  ++FT  SV++   + +DLN  K V +   K G E    V N+ 
Sbjct: 263 ELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNST 322

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY-----------HGSYEEALKYFS 426
           + +Y ++G  D A  +F  M+D  +I+W ++I+G A                 +AL  F 
Sbjct: 323 MYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFR 382

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
           D++ S + PD    SSILS C+ +  LE G+Q+HA  +KSG  S + V+++LV +Y KCG
Sbjct: 383 DLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCG 442

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
           CI DAN+ F  M TR  +TWT++I G +Q+G+ +EA+Q +++M   G +P+ ITFV LL 
Sbjct: 443 CIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLS 502

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ACS+AGL E A  YF+ M K Y I+P  DHY CMID+  R G++ +A + + +   EP+ 
Sbjct: 503 ACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNE 562

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
            +W +L++ CR HG++EL   AA+ L EL+P     Y+ L NMY +  +W+D ARVRKLM
Sbjct: 563 AIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKLM 622

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFAL 726
           K   +      SW+    +V+ F + DR HP  T++Y  ++ ++   K  GY P  N  L
Sbjct: 623 KQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEPYQNAEL 682

Query: 727 HNVEEEGKEIG--LAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
            + E++ K     L +HSE+LAVA GLL  P GA +R+ KN+ +C DCH+++K  S +  
Sbjct: 683 SDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITMCRDCHSSIKLFSLLEN 742

Query: 785 RHIILRDSNRFHHFKAGNCSCGDY 808
           R II+RDS R H FK G CSCGD+
Sbjct: 743 REIIVRDSKRLHKFKDGRCSCGDF 766



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 148/508 (29%), Positives = 264/508 (51%), Gaps = 24/508 (4%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G + +  +  D F   +++ AY      R+A++LF+  P +N  TW++L+ GY+      
Sbjct: 102 GHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTLNSQPA 161

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
              E+F +M   G  PS YTL   L  C     +  G+Q HGYAIK   +    +   L 
Sbjct: 162 LGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLC 221

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFK-AIECFRDMRVEGVESN 234
            +YAK   +  A   F   P+ KN + WTTMI+  +++    +  +  F DM ++GV  N
Sbjct: 222 SLYAKLGSLDSALRAFWRIPE-KNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPN 280

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
           +FT  S+++ C      + G QV       G E N+ V+++ + +Y + G+ D A RL E
Sbjct: 281 EFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFE 340

Query: 295 YSEIDNEVSWNSMIVGFAR-------------QGFHKEALSLFKKMHARDIKIDDFTYPS 341
             E  + ++WN+MI G+A+             +GF  +AL++F+ +    +K D FT+ S
Sbjct: 341 QMEDASIITWNAMISGYAQIMDSAKDDLQARSRGF--QALTIFRDLKRSVMKPDLFTFSS 398

Query: 342 VLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
           +L+  ++ + L   + +H+  +K+GF     VN+AL++MY K G +  A   F  M  + 
Sbjct: 399 ILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRT 458

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
            ++WTS+I+G + HG  +EA++ F +MR++G+ P+ +   S+LSAC+   ++E  +  + 
Sbjct: 459 FVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEH-YF 517

Query: 462 VFLKSGGCSSLSVDN--SLVLVYAKCGCINDA-NRVFDSMHTRDVITWTALIMGCAQNGK 518
             +K   C    VD+   ++ ++ + G + DA + +  +    +   W++L+ GC  +G 
Sbjct: 518 DMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGN 577

Query: 519 GKEALQFYDQMLARGTKPDYI-TFVGLL 545
            + A    D++L    KP  I T++ LL
Sbjct: 578 MELAFYAADKLLE--LKPKGIETYILLL 603



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 130/469 (27%), Positives = 217/469 (46%), Gaps = 43/469 (9%)

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M  EG       +  +L  C    +      VHG +  +G  A+++V ++L++ Y +C  
Sbjct: 69  MLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSA 128

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
              ARRL +     N V+W +++ G+         L +F +M         +T  + LN 
Sbjct: 129 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 188

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
             ++ D++  K VH   +K G E    + N+L  +YAK G+LD A   F  + +K+VI+W
Sbjct: 189 CLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITW 248

Query: 406 TSLITGCAY-HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
           T++I+ CA      E  +  F DM + G+ P+   ++S++S C     L  G+QV A   
Sbjct: 249 TTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSF 308

Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ--------- 515
           K G  ++L V NS + +Y + G  ++A R+F+ M    +ITW A+I G AQ         
Sbjct: 309 KIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDL 368

Query: 516 --NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IK 571
               +G +AL  +  +     KPD  TF  +L  CS       A    E  ++++   IK
Sbjct: 369 QARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCS-------AMMALEQGEQIHAQTIK 421

Query: 572 PG--PDHY--ACMIDLLGRSGKLIEA-KALLDQMVGEPDAT--VWKALLSACRVHGDLEL 624
            G   D    + ++++  + G + +A KA L+     P  T   W +++S    HG    
Sbjct: 422 SGFLSDVVVNSALVNMYNKCGCIQDANKAFLEM----PTRTFVTWTSMISGYSQHGQ--- 474

Query: 625 GERAANNLFE------LEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
             + A  LFE      + P N + +V L +  S AG  E+A     +MK
Sbjct: 475 -PQEAIQLFEEMRLAGVRP-NEITFVSLLSACSYAGLVEEAEHYFDMMK 521



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 154/325 (47%), Gaps = 24/325 (7%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  +   GE DEA +LFE+M D    TWN MI+ YA   ++ ++ K   +   + F 
Sbjct: 320 NSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYA---QIMDSAKDDLQARSRGF- 375

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
                           +A  +F  ++    +P  +T  ++L +CS    L++GEQ H   
Sbjct: 376 ----------------QALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQT 419

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           IK+ F  +  V + LV+MY KC CI +A   F   P  +  V WT+MI+GYSQ+G   +A
Sbjct: 420 IKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPT-RTFVTWTSMISGYSQHGQPQEA 478

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALID 278
           I+ F +MR+ GV  N+ TF S+L+AC+     +        +      E  V     +ID
Sbjct: 479 IQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMID 538

Query: 279 MYAKCGDLDSARRLLEYSEID-NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
           M+ + G ++ A   ++ +  + NE  W+S++ G    G  + A     K+     K  + 
Sbjct: 539 MFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIE- 597

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLI 362
           TY  +LN + S     +   V  L+
Sbjct: 598 TYILLLNMYISTERWQDVARVRKLM 622


>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
          Length = 789

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 270/777 (34%), Positives = 425/777 (54%), Gaps = 92/777 (11%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  L  +SN G I +A ++F  +   + ++WNTMI+ +A+SG++REA+KLF + P ++  
Sbjct: 43  NHLLNMYSNCGLISDAYRVFGGIMFPNVYSWNTMISGFADSGQMREAEKLFEKMPERDSV 102

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           +W+S++ GY + G                       L+  ++     G L+   Q HG+A
Sbjct: 103 SWNSMMSGYFHNG----------------------ELEATIKASGSLGYLKLALQLHGFA 140

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG---------------------- 197
            K  F ++  V T ++DMY KC  +  A+ +F   P+                       
Sbjct: 141 EKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKAL 200

Query: 198 --------KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
                   ++ V+W TMI+  SQ+G+G + +  F +M  +G   N  T+ S+L+AC ++ 
Sbjct: 201 ELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIY 260

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
             ++GA +H  I+      +VY    LIDMYAKCG L+SAR++ +     N VSW S+I 
Sbjct: 261 DLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIG 320

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           G A+ GF +EAL LF +M    +  D FT  +VL    S  D++  + +H+  +  G + 
Sbjct: 321 GVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDS 380

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS------------ 417
              V NAL+ MYAK G++  A   F LM  +D+ISWT++IT  +  G             
Sbjct: 381 SVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMP 440

Query: 418 -------------------YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
                              +EE LK +  M   G+  D +  S+ +SACA+L VL  G Q
Sbjct: 441 ERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQ 500

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK 518
           + A   K G  S++SV NS+V +Y++CG I +A ++F S+  +++++W A++ G AQNG+
Sbjct: 501 ILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQ 560

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA 578
           G++ ++ +++ML  G  PD I++V +L  CSH+G     ++YF SM K +GI P  +H+ 
Sbjct: 561 GRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSMTKDHGISPMSEHFV 620

Query: 579 CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM 638
           CM+DLLGR+G+L +AK L++QM  +P+A +W ALL+ACR+HG+ +L E A  NL EL+  
Sbjct: 621 CMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGNTKLAELAVKNLLELDAE 680

Query: 639 NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPL 698
               Y  L+N+YS +GK +    VRKLM+ +G+RK PGCSW+E +++VH+F  +D  HP 
Sbjct: 681 GPGSYCLLANIYSESGKIQGVTNVRKLMRDKGVRKNPGCSWIEVDNRVHVFTVDDTNHPQ 740

Query: 699 RTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLP 755
             D++      ML           N+A  NV   G+     YHSEKLAV   L++LP
Sbjct: 741 IKDVHR-----MLEEIIKKIEEIKNYA--NVMNSGRSHN--YHSEKLAVPLRLISLP 788



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 119/482 (24%), Positives = 218/482 (45%), Gaps = 55/482 (11%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           F   +  CA++ +     ++H  ++  G ++++++Q+ L++MY+ CG +  A R+     
Sbjct: 7   FYESMKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIM 66

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN-------- 349
             N  SWN+MI GFA  G  +EA  LF+KM  R    D  ++ S+++ +  N        
Sbjct: 67  FPNVYSWNTMISGFADSGQMREAEKLFEKMPER----DSVSWNSMMSGYFHNGELEATIK 122

Query: 350 ------------------------IDLNNAKSVHSLIVKTGFEGYK------------FV 373
                                   ID     SV  + +K G   +             F 
Sbjct: 123 ASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFC 182

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
            N++I  Y+K G++  A  +F  M ++D +SW ++I+  + HG   E L  F +M   G 
Sbjct: 183 WNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGF 242

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
            P+ +  +S+LSAC  +  LE+G  +HA  ++   C  +     L+ +YAKCG +  A +
Sbjct: 243 RPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQ 302

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC-SHAG 552
           VFD +   + ++WT+LI G AQ G  +EAL  ++QM       D  T   +L  C S   
Sbjct: 303 VFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKD 362

Query: 553 LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
           ++   + +  ++ +  G+         ++ +  + G + +A    + M    D   W A+
Sbjct: 363 ISIGEQLHAHTITR--GLDSSVPVANALVTMYAKCGDVWKANHAFELMPIR-DIISWTAM 419

Query: 613 LSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIR 672
           ++A    GD+   E+A     ++   N + +  +   Y   G WE+  +V   M   G++
Sbjct: 420 ITAFSQAGDV---EKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVK 476

Query: 673 KE 674
            +
Sbjct: 477 TD 478



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 165/365 (45%), Gaps = 11/365 (3%)

Query: 8   ILNFSLRCRSKIIGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRD 66
           +L   L  +   IG   + H +   +  +  +  ALV  ++  G++ +A   FE M  RD
Sbjct: 353 VLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRD 412

Query: 67  GFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL 126
             +W  MI A++ +G + +A++ F++ P +N  +W+S++  Y   G   E  +++ QM  
Sbjct: 413 IISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLR 472

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
           EG +    T    +  C+   +L  G Q    A K  F  N  V   +V MY++C  I E
Sbjct: 473 EGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEE 532

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A+ +F      KN V+W  M+ GY+QNG G K IE F  M   G   +Q ++ S+L+ C 
Sbjct: 533 AQKMFSSIV-MKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGC- 590

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQS----ALIDMYAKCGDLDSARRLLEYSEID-NE 301
             S   F ++     LS   +  +   S     ++D+  + G L+ A+ L+       N 
Sbjct: 591 --SHSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNA 648

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
             W +++      G  K A    K +   D +    +Y  + N ++ +  +    +V  L
Sbjct: 649 AIWGALLAACRIHGNTKLAELAVKNLLELDAE-GPGSYCLLANIYSESGKIQGVTNVRKL 707

Query: 362 IVKTG 366
           +   G
Sbjct: 708 MRDKG 712


>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 267/776 (34%), Positives = 417/776 (53%), Gaps = 39/776 (5%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +I AY   G +  A K+F      N  +++++I G++    + +A E+F++M+  G  
Sbjct: 127 NALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIE 186

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            ++++   +L +C     L+ G Q H   IK  F    FV   L+ +Y KC  +     L
Sbjct: 187 LNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQL 246

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR-VEGVESNQFTFPSILTACAAVS 249
           F   P  ++  +W T+I+   +     +A E FRDMR ++G   + FT  +IL A   ++
Sbjct: 247 FDEMPH-RDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLA 305

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
           +   G ++H  ++  GFE+N+ V +ALI  Y KCG +     L E   + + ++W  MI 
Sbjct: 306 SM-VGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMIT 364

Query: 310 GFARQGFHKEALSLFKKMHARD-------------------------------IKIDDFT 338
            +   G    AL +F KM AR+                               +++ DFT
Sbjct: 365 AYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFT 424

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA--FMVFNL 396
              VLN     ++   +K +H  I+K GF     +  AL+DM  + G +  A        
Sbjct: 425 LTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGS 484

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG-ICPDHVVVSSILSACAELTVLEF 455
                 I WTS+I G A +   EEA+  F   ++ G +  D V  +++L  C  L   E 
Sbjct: 485 FSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEM 544

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
           G+Q+H   LKSG  S L V NS++ +Y+KC  ++DA +VF+ M   D+++W  LI G   
Sbjct: 545 GKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLL 604

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH--AGLAENARWYFESMDKVYGIKPG 573
           + +G EAL  + +M   G KPD +TFV ++ A  H  + L +N R  F SM  +Y I P 
Sbjct: 605 HRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPT 664

Query: 574 PDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLF 633
            +HY  ++ +LG  G L EA+ ++++M  EP+A+VW+ALL ACR+H +  +G+RAA +L 
Sbjct: 665 VEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKHLL 724

Query: 634 ELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISED 693
            ++P++   Y+ +SN+YS  G+W  +  VR+ M+ +G RK PG SW+   ++VH F + D
Sbjct: 725 AMKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWIIHENKVHSFYARD 784

Query: 694 RGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLT 753
           + HP   DI+S ++ +++   +AGYVPD +F LH VEE  K+  L YHS K+A  +GLL 
Sbjct: 785 KSHPQAKDIHSGLELLIMECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKIAATYGLLM 844

Query: 754 LPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
              G PIRI KN+ +CGDCHT +KY+S V  R I LRD++  H F  G CSC DYW
Sbjct: 845 TRPGRPIRIVKNILLCGDCHTFLKYVSIVTGREIFLRDASGHHCFLNGQCSCKDYW 900



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/415 (31%), Positives = 195/415 (46%), Gaps = 39/415 (9%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM-QL 126
           F  N ++  Y   G L    +LF+E P ++  +W+++I       +   AFELF  M ++
Sbjct: 225 FVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRI 284

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQR-GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           +G+R   +TL  +  L + +GL    G + H + IK  F+ N  V+  L+  Y KC  I 
Sbjct: 285 DGFRIDHFTLSTI--LVAARGLASMVGREIHAHVIKIGFESNISVINALIRFYTKCGSIK 342

Query: 186 EAEYLFKMFPDGKNHVAWTTMIT-------------------------------GYSQNG 214
               LF+     ++ + WT MIT                               G+ QNG
Sbjct: 343 HVVALFEKM-RVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNG 401

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQS 274
            G KA+  F  M  EGVE   FT   +L AC  +       Q+HG IL  GF +N  +++
Sbjct: 402 EGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEA 461

Query: 275 ALIDMYAKCGDLDSARRL--LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD- 331
           AL+DM  +CG +  A+++           + W SMI G+AR    +EA+SLF +      
Sbjct: 462 ALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEGA 521

Query: 332 IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
           + +D     +VL    +       K +H   +K+GF     V N++I MY+K  N+D A 
Sbjct: 522 MVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAI 581

Query: 392 MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSA 446
            VFN+M   D++SW  LI G   H   +EAL  +S M  +GI PD V    I+SA
Sbjct: 582 KVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISA 636



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 193/378 (51%), Gaps = 48/378 (12%)

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           VH  I       ++++ +ALI  Y K G + +A ++       N VS+ +MI GFA+   
Sbjct: 112 VHASIFK--LAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNR 169

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
            ++A+ +F +M +  I++++F++ ++L      +DL     +H++++K GF  Y FV+NA
Sbjct: 170 ERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNA 229

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM-RISGICP 435
           L+ +Y K G LD    +F+ M  +D+ SW ++I+       YE A + F DM RI G   
Sbjct: 230 LMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRI 289

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           DH  +S+IL A   L  +  G+++HA  +K G  S++SV N+L+  Y KCG I     +F
Sbjct: 290 DHFTLSTILVAARGLASM-VGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALF 348

Query: 496 DSMHTRDVITWT-------------------------------ALIMGCAQNGKGKEALQ 524
           + M  RDVITWT                               A++ G  QNG+G +AL 
Sbjct: 349 EKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALA 408

Query: 525 FYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPGPDHYAC--- 579
           F+ +M+  G +    T  G+L AC   GL   A+       +++G  +K G    AC   
Sbjct: 409 FFCRMVEEGVELTDFTLTGVLNAC---GLLMEAKIS----KQIHGFILKFGFGSNACIEA 461

Query: 580 -MIDLLGRSGKLIEAKAL 596
            ++D+  R G++ +A+ +
Sbjct: 462 ALLDMCTRCGRMADAQKM 479



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 134/506 (26%), Positives = 235/506 (46%), Gaps = 56/506 (11%)

Query: 1   MFKLD-FKILNFSL-------RCRSKIIGPARYTHNVGNSVKPASDLNRALVDF-SNSGE 51
           M ++D F+I +F+L       R  + ++G   + H +    +    +  AL+ F +  G 
Sbjct: 281 MRRIDGFRIDHFTLSTILVAARGLASMVGREIHAHVIKIGFESNISVINALIRFYTKCGS 340

Query: 52  IDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNY 111
           I     LFEKM  RD  TW  MI AY   G    A ++F++ P +N  ++++++ G+   
Sbjct: 341 IKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQN 400

Query: 112 GLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV 171
           G   +A   F +M  EG   + +TL  VL  C L    +  +Q HG+ +K  F  NA + 
Sbjct: 401 GEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIE 460

Query: 172 TGLVDMYAKCKCIFEAEYL-FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG 230
             L+DM  +C  + +A+ +  +        + WT+MI GY++N    +AI  F   ++EG
Sbjct: 461 AALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQLEG 520

Query: 231 -VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
            +  ++    ++L  C  ++  + G Q+H   L SGF +++ V +++I MY+KC ++D A
Sbjct: 521 AMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDA 580

Query: 290 RRLLEYSEIDNEVSWNSMIVG--FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFA 347
            ++       + VSWN +I G    RQG   EALS++ KM    IK D  T+  +++   
Sbjct: 581 IKVFNVMPAHDIVSWNGLIAGHLLHRQG--DEALSVWSKMEKAGIKPDTVTFVLIIS--- 635

Query: 348 SNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ----DKDVI 403
                                 Y+  N+ L+D        +C  +  ++      D  V 
Sbjct: 636 ---------------------AYRHTNSNLVD--------NCRRLFLSMKTIYHIDPTVE 666

Query: 404 SWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV--HA 461
            +TSL+    Y G  EEA +  + M I    P+  V  ++L AC   +    G++   H 
Sbjct: 667 HYTSLVGVLGYWGLLEEAEEMINKMPIE---PEASVWRALLDACRIHSNTTIGKRAAKHL 723

Query: 462 VFLKSGGCSSLSVDNSLVLVYAKCGC 487
           + +K    S+  + ++L   Y +  C
Sbjct: 724 LAMKPLDPSTYILVSNLYSAYGRWHC 749



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 56/96 (58%), Gaps = 2/96 (2%)

Query: 453 LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMG 512
           +E  + VHA   K      + + N+L++ Y K G + +A +VF  +   +V+++TA+I G
Sbjct: 106 VELIKAVHASIFKLA--EDIHLANALIVAYLKLGMVPNAYKVFVGLSCPNVVSYTAMISG 163

Query: 513 CAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
            A++ + ++A++ + +M + G + +  +FV +L  C
Sbjct: 164 FAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVC 199


>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 678

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 258/653 (39%), Positives = 373/653 (57%), Gaps = 38/653 (5%)

Query: 161 KTCFD----LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
           K C D     N  +   L+  YA C   +   ++F   P  KN V +  MI  Y  N   
Sbjct: 60  KICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPK-KNVVFFNVMIRSYVNNHLY 118

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
             A+  F++M   G++ + +T+P +L A +       G Q+H  ++  G + NV+V + L
Sbjct: 119 SDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGL 178

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           I MY KCG L  A R+L+     + VSWNS++ G AR G   +AL + K+M    +K D 
Sbjct: 179 ISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDA 238

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
            T  S+L                  +  T  +   FV     +M+ K  N          
Sbjct: 239 GTMASLL----------------PAVTNTCLDNVSFVK----EMFMKLAN---------- 268

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
              K ++SW  +I     +    EA+  F  M    + PD + ++S+L AC +L+ L  G
Sbjct: 269 ---KSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLG 325

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
           +++H   ++     +L ++N+L+ +YAKCGC+  A  VFD M  RDV++WT++I     N
Sbjct: 326 RRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMN 385

Query: 517 GKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH 576
           GKG++A+  + +M   G  PD I FV +L ACSHAGL +  R+YF+ M +   I P  +H
Sbjct: 386 GKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEH 445

Query: 577 YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELE 636
           + CM+DLLGR+G++ EA   + QM  EP+  VW ALLSACRV+ ++ +G  AA+ LF+L 
Sbjct: 446 FVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLC 505

Query: 637 PMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGH 696
           P  +  YV LSN+Y+ AG+WED   VR +MK++GI+K PG S  E +++VH F++ D+ H
Sbjct: 506 PEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSH 565

Query: 697 PLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQ 756
           P    IY ++D  +  +KEAGYVP+ + ALH+VEEE KE  LA HSEKLA+AF +L    
Sbjct: 566 PQSKQIYEELDVSVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAP 625

Query: 757 GAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           G+PIRI KNLRVCGDCH A K IS +  R I +RD+NRFHHF  G CSCGDYW
Sbjct: 626 GSPIRITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 678



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 182/385 (47%), Gaps = 34/385 (8%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           ++ AYA  G     + +F+E P KN   ++ +I  Y N  L  +A  +F  M   G  P 
Sbjct: 77  LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 136

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
            YT   VL+  S    L  G Q H   ++   DLN FV  GL+ MY KC C+ EA  +  
Sbjct: 137 HYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLD 196

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
             P  ++ V+W +++ G ++NG    A+E  ++M + G++ +  T  S+L A        
Sbjct: 197 QMP-CRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVT------ 249

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
                + C+ +  F   ++++ A   +                      VSWN MI  + 
Sbjct: 250 -----NTCLDNVSFVKEMFMKLANKSL----------------------VSWNVMIAVYM 282

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
                 EA+ +F +M    +  D  +  SVL        L   + +H  +V+   +    
Sbjct: 283 NNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLL 342

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           + NALIDMYAK G L+ A  VF+ M+ +DV+SWTS+I+    +G   +A+  FS M+  G
Sbjct: 343 LENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLG 402

Query: 433 ICPDHVVVSSILSACAELTVLEFGQ 457
           + PD +   S+LSAC+   +L+ G+
Sbjct: 403 LNPDSIAFVSVLSACSHAGLLDEGR 427



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 164/355 (46%), Gaps = 44/355 (12%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D + F  N +I+ Y   G L EA ++ ++ P ++  +W+SL+ G +  G   +A E+  +
Sbjct: 169 DLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKE 228

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+L G +P   T+ ++L   +                 TC D  +FV             
Sbjct: 229 MELLGLKPDAGTMASLLPAVT----------------NTCLDNVSFV------------- 259

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
               E   K+    K+ V+W  MI  Y  N    +A++ F  M    V+ +  +  S+L 
Sbjct: 260 ---KEMFMKL--ANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLP 314

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC  +SA   G ++H  ++    + N+ +++ALIDMYAKCG L+ AR + +  +  + VS
Sbjct: 315 ACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVS 374

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           W SMI  +   G  ++A+SLF +M    +  D   + SVL+  +    L+  +    L+ 
Sbjct: 375 WTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMT 434

Query: 364 KTGFEGYKFVNN-----ALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGC 412
               E  K V        ++D+  + G +D A+  +  +  + +   W +L++ C
Sbjct: 435 ----EECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSAC 485



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 132/306 (43%), Gaps = 48/306 (15%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREA------------------- 86
           +   G + EA ++ ++M  RD  +WN+++A  A +G+  +A                   
Sbjct: 182 YGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTM 241

Query: 87  ------------------KKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG 128
                             K++F +   K+  +W+ +I  Y N  +  EA ++F QM+   
Sbjct: 242 ASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHA 301

Query: 129 YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
             P   ++ +VL  C     L  G + H Y ++     N  +   L+DMYAKC C+  A 
Sbjct: 302 VDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAR 361

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
            +F      ++ V+WT+MI+ Y  NG G  A+  F  M+  G+  +   F S+L+AC+  
Sbjct: 362 EVFDQM-KFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHA 420

Query: 249 SARD-----FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEV 302
              D     F      C +    E  V     ++D+  + G +D A   ++   ++ NE 
Sbjct: 421 GLLDEGRYYFKLMTEECKIVPRIEHFV----CMVDLLGRAGQVDEAYGFIKQMPMEPNER 476

Query: 303 SWNSMI 308
            W +++
Sbjct: 477 VWGALL 482


>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
 gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
          Length = 677

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 252/636 (39%), Positives = 371/636 (58%), Gaps = 35/636 (5%)

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
           L+  YA C       ++F    D KN V +  MI  Y  NG    A+  F+ M  +G   
Sbjct: 77  LMRAYAACGEPCYTRHIFDEITD-KNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYP 135

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
           + +T+P +L AC+       G Q+HG ++  G + N+Y+ + L+ MY KC  LD+ARR+L
Sbjct: 136 DNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVL 195

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
           +     + VSWNSM+ G+A+ G   +AL L ++M    +K D  T  S+L    +N   +
Sbjct: 196 DEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPA-VTNTSCD 254

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
           N   V  + VK                                +++K +ISW  +I    
Sbjct: 255 NVLYVKDMFVK--------------------------------LKEKSLISWNVMIAVYV 282

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
            +    EA+  +  M++ G+ PD V +SS+L AC +L+    G+++H    +     +L 
Sbjct: 283 NNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLL 342

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
           ++N+L+ +YAKCGC+ +A  VFD M  RDV++WT++I     +G+GK+A+  + +M   G
Sbjct: 343 LENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSG 402

Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
             PD+I FV +L ACSHAGL +  R+ F  M + YGI PG +HY CM+DLLGR+GK+ EA
Sbjct: 403 FTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAE-YGITPGIEHYNCMVDLLGRAGKIDEA 461

Query: 594 KALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTA 653
             L  QM  EP+  VW +LLSACRV+  + +   AA++LF+L P  +  YV LSN+Y+ A
Sbjct: 462 YHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKA 521

Query: 654 GKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLI 713
           G+W+D   VR +M S+GI+K PG S VE N  V+ F++ D+ H    +IY  +  ++  +
Sbjct: 522 GRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIYKALGVLVGRM 581

Query: 714 KEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCH 773
           KE GY+P+ + ALH+VEEE KE  LA HSEKLA+ F +L    G+ IRI KN+RVCGDCH
Sbjct: 582 KELGYMPETDSALHDVEEEDKECHLAVHSEKLAIVFAILNTKPGSTIRITKNIRVCGDCH 641

Query: 774 TAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            A K IS +  R II+RD++RFHHF+ G CSCGDYW
Sbjct: 642 VATKLISKIAEREIIIRDTHRFHHFRDGVCSCGDYW 677



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 132/445 (29%), Positives = 210/445 (47%), Gaps = 41/445 (9%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           ++ AYA  G     + +F+E   KN   ++ +I  Y N GL  +A  +F  M  +G+ P 
Sbjct: 77  LMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPD 136

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
            YT   VL+ CS+ G L  G Q HG  +K   D+N ++  GLV MY KCK +  A  +  
Sbjct: 137 NYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLD 196

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
             P G++ V+W +M+ GY+QNG    A++  R+M    ++ +  T  S+L A    S  +
Sbjct: 197 EMP-GRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDN 255

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
                            +YV+    DM+ K         L E S I    SWN MI  + 
Sbjct: 256 V----------------LYVK----DMFVK---------LKEKSLI----SWNVMIAVYV 282

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA---KSVHSLIVKTGFEG 369
                 EA+ L+ +M    ++ D  +  SVL       DL+ A   + +H  + +     
Sbjct: 283 NNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACG---DLSAAVLGRRIHEYVERKKLRP 339

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
              + NALIDMYAK G L  A  VF+ M  +DV+SWTS+I+     G  ++A+  F  MR
Sbjct: 340 NLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMR 399

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
            SG  PD +   S+L+AC+   +++ G+    +  + G    +   N +V +  + G I+
Sbjct: 400 DSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAEYGITPGIEHYNCMVDLLGRAGKID 459

Query: 490 DANRVFDSMHTR-DVITWTALIMGC 513
           +A  +   M    +   W +L+  C
Sbjct: 460 EAYHLTRQMPMEPNERVWGSLLSAC 484



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 130/297 (43%), Gaps = 43/297 (14%)

Query: 52  IDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKL---------------------- 89
           +D A ++ ++M  RD  +WN+M+A YA +GR  +A KL                      
Sbjct: 188 LDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPA 247

Query: 90  ---------------FNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQY 134
                          F +   K+  +W+ +I  Y N  +  EA +L+ QMQ+ G  P   
Sbjct: 248 VTNTSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAV 307

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK-- 192
           ++ +VL  C        G + H Y  +     N  +   L+DMYAKC C+ EA  +F   
Sbjct: 308 SISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQM 367

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
           MF D    V+WT+MI+ Y  +G G  A+  F+ MR  G   +   F S+L AC+     D
Sbjct: 368 MFRDV---VSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVD 424

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
            G      +   G    +   + ++D+  + G +D A  L     ++ NE  W S++
Sbjct: 425 EGRYCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLL 481



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 16/147 (10%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +I  YA  G L+EA+ +F++  F++  +W+S+I  Y   G   +A  LF +M+  G+ 
Sbjct: 345 NALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFT 404

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA-FVVTG-------LVDMYAKCK 182
           P      +VL  CS  GL+  G        + CF+L A + +T        +VD+  +  
Sbjct: 405 PDWIAFVSVLAACSHAGLVDEG--------RYCFNLMAEYGITPGIEHYNCMVDLLGRAG 456

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITG 209
            I EA +L +  P   N   W ++++ 
Sbjct: 457 KIDEAYHLTRQMPMEPNERVWGSLLSA 483


>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 819

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 250/658 (37%), Positives = 391/658 (59%), Gaps = 1/658 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D + +    +I  YA  G + EA  +F+  P +   TW+++I GY+  G    A ELF +
Sbjct: 152 DANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDR 211

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M +EG RP ++ L + +  CS  G L+ G Q HGYA ++  + +  V+  L+D+Y KC  
Sbjct: 212 MGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSR 271

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +  A  LF    + +N V+WTTMI+GY QN +  +AI  F +M   G + + F   SIL 
Sbjct: 272 LSAARKLFDCM-EYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILN 330

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           +C +++A   G Q+H  ++ +  EA+ YV++ALIDMYAKC  L  AR + +    D+ +S
Sbjct: 331 SCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAIS 390

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           +N+MI G+++     EA+++F++M    ++    T+ S+L   +S + +  +K +H LI+
Sbjct: 391 YNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLII 450

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K+G     +  +ALID+Y+K   ++ A  VFN++  KD++ W S+I G A +   EEA+K
Sbjct: 451 KSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIK 510

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            F+ + +SG+ P+     ++++  + L  +  GQQ HA  +K+G  +   V N+L+ +YA
Sbjct: 511 LFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYA 570

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG I +   +F+S    DVI W ++I   AQ+G  +EALQ +  M     +P+Y+TFVG
Sbjct: 571 KCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVG 630

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           +L AC+HAG       +F SM   Y I+PG +HYA +++L GRSGKL  AK  +++M  +
Sbjct: 631 VLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIK 690

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
           P A VW++LLSAC + G+ E+G  AA      +P ++ PYV LSN+Y++ G W D   +R
Sbjct: 691 PAAAVWRSLLSACHLFGNAEIGRYAAEMALLADPTDSGPYVLLSNIYASKGLWADVHNLR 750

Query: 664 KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPD 721
           + M S G  KE GCSW+E   +VH FI   R HP    IYS +DE+  LIK  GYVPD
Sbjct: 751 QQMDSSGTVKETGCSWIEVTKEVHTFIVRGREHPEAELIYSVLDELTSLIKNLGYVPD 808



 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 190/559 (33%), Positives = 305/559 (54%), Gaps = 4/559 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N ++  Y+N GRLR+A+ LF+  P +N  +W S+I  Y+ +G D  A  LF   Q
Sbjct: 52  DLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQ 111

Query: 126 LEGYR-PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
                 P+++ L +VLR C+    +  GEQ HG A+K   D N +V T L+++YAK  C+
Sbjct: 112 KASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCM 171

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            EA  +F   P  +  V W T+ITGY+Q G G  A+E F  M +EGV  ++F   S ++A
Sbjct: 172 DEAMLVFHALPV-RTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSA 230

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C+A+   + G Q+HG    S  E +  V + LID+Y KC  L +AR+L +  E  N VSW
Sbjct: 231 CSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSW 290

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
            +MI G+ +  F+ EA+++F  M     + D F   S+LN   S   +   + +H+ ++K
Sbjct: 291 TTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIK 350

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
              E  ++V NALIDMYAK  +L  A  VF+ + + D IS+ ++I G + +    EA+  
Sbjct: 351 ADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNI 410

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           F  MR   + P  +   S+L   +    +E  +Q+H + +KSG    L   ++L+ VY+K
Sbjct: 411 FQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSK 470

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           C  +NDA  VF+ +H +D++ W ++I G AQN +G+EA++ ++Q+L  G  P+  TFV L
Sbjct: 471 CSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVAL 530

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           +   S      + + +   + K  G+   P     +ID+  + G + E + L +   GE 
Sbjct: 531 VTVASTLASMFHGQQFHAWIIKA-GVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGE- 588

Query: 605 DATVWKALLSACRVHGDLE 623
           D   W ++++    HG  E
Sbjct: 589 DVICWNSMITTYAQHGHAE 607



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 157/546 (28%), Positives = 260/546 (47%), Gaps = 38/546 (6%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G  +   ++ D    N +I  Y    RL  A+KLF+   ++N  +W+++I GY     + 
Sbjct: 245 GYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNA 304

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  +FW M   G++P  +   ++L  C     + +G Q H + IK   + + +V   L+
Sbjct: 305 EAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALI 364

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMYAKC+ + EA  +F    +  + +++  MI GYS+N    +A+  F+ MR   +  + 
Sbjct: 365 DMYAKCEHLTEARAVFDALAE-DDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSL 423

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            TF S+L   ++  A +   Q+HG I+ SG   ++Y  SALID+Y+KC  ++ A+ +   
Sbjct: 424 LTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNM 483

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               + V WNSMI G A+    +EA+ LF ++    +  ++FT+ +++   ++   + + 
Sbjct: 484 LHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHG 543

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           +  H+ I+K G +    V+NALIDMYAK G +    M+F     +DVI W S+IT  A H
Sbjct: 544 QQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQH 603

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G  EEAL+ F  M  + + P++V    +LSACA           HA F+  G        
Sbjct: 604 GHAEEALQVFRLMGEAEVEPNYVTFVGVLSACA-----------HAGFVGEG-------- 644

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC-AQNGKGKEALQFYDQMLARGT 534
                       +N  N +  +      I   A ++    ++GK   A +F ++M     
Sbjct: 645 ------------LNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERM---PI 689

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAK 594
           KP    +  LL AC   G AE  R+  E          GP  Y  + ++    G   +  
Sbjct: 690 KPAAAVWRSLLSACHLFGNAEIGRYAAEMALLADPTDSGP--YVLLSNIYASKGLWADVH 747

Query: 595 ALLDQM 600
            L  QM
Sbjct: 748 NLRQQM 753



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 153/521 (29%), Positives = 257/521 (49%), Gaps = 23/521 (4%)

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
           F+   L+  Y+    + +A +LF   P  +N V+W ++I+ Y+Q+G    AI  F   + 
Sbjct: 54  FLTNLLLRGYSNLGRLRDARHLFDRMPH-RNLVSWGSVISMYTQHGRDDCAISLFVAFQK 112

Query: 229 EGVE-SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLD 287
              E  N+F   S+L AC    A   G QVHG  +    +ANVYV +ALI++YAK G +D
Sbjct: 113 ASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMD 172

Query: 288 SARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFA 347
            A  +     +   V+WN++I G+A+ G    AL LF +M    ++ D F   S ++  +
Sbjct: 173 EAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACS 232

Query: 348 SNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTS 407
           +   L   + +H    ++  E    V N LID+Y K   L  A  +F+ M+ ++++SWT+
Sbjct: 233 ALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTT 292

Query: 408 LITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG 467
           +I+G   +    EA+  F +M  +G  PD    +SIL++C  L  +  G+Q+HA  +K+ 
Sbjct: 293 MISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKAD 352

Query: 468 GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYD 527
             +   V N+L+ +YAKC  + +A  VFD++   D I++ A+I G ++N    EA+  + 
Sbjct: 353 LEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQ 412

Query: 528 QMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPGP--DHYA--CMI 581
           +M     +P  +TFV LL   S       ++   E   +++G  IK G   D YA   +I
Sbjct: 413 RMRFFSLRPSLLTFVSLLGVSS-------SQLAIELSKQIHGLIIKSGTSLDLYAASALI 465

Query: 582 DLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAAN--NLFELEPM- 638
           D+  +   + +AK + + M+   D  +W +++     H   E GE A    N   L  M 
Sbjct: 466 DVYSKCSLVNDAKTVFN-MLHYKDMVIWNSMIFG---HAQNEQGEEAIKLFNQLLLSGMA 521

Query: 639 -NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCS 678
            N   +V L  + ST        +    +   G+  +P  S
Sbjct: 522 PNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVS 562



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 203/428 (47%), Gaps = 16/428 (3%)

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
           R     +H     +G   ++++ + L+  Y+  G L  AR L +     N VSW S+I  
Sbjct: 34  RRLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISM 93

Query: 311 FARQGFHKEALSLFKKMHARDIKI-DDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           + + G    A+SLF        ++ ++F   SVL     +  ++  + VH + VK   + 
Sbjct: 94  YTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDA 153

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
             +V  ALI++YAK G +D A +VF+ +  +  ++W ++ITG A  G    AL+ F  M 
Sbjct: 154 NVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMG 213

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
           I G+ PD  V++S +SAC+ L  LE G+Q+H    +S   +  SV N L+ +Y KC  ++
Sbjct: 214 IEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLS 273

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
            A ++FD M  R++++WT +I G  QN    EA+  +  M   G +PD      +L +C 
Sbjct: 274 AARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCG 333

Query: 550 HAGLAENARWYFESMDKVYGIKPGPDHYA--CMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
                   R     + K        D Y    +ID+  +   L EA+A+ D +  E DA 
Sbjct: 334 SLAAIWQGRQIHAHVIKA---DLEADEYVKNALIDMYAKCEHLTEARAVFDAL-AEDDAI 389

Query: 608 VWKALLSACRVHGDLELGERAAN-----NLFELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
            + A++     + DL     A N       F L P + + +V L  + S+    E + ++
Sbjct: 390 SYNAMIEGYSKNRDL---AEAVNIFQRMRFFSLRP-SLLTFVSLLGVSSSQLAIELSKQI 445

Query: 663 RKLMKSRG 670
             L+   G
Sbjct: 446 HGLIIKSG 453



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 36/174 (20%), Positives = 68/174 (39%), Gaps = 35/174 (20%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           ++ AL+D ++  G I E   LFE     D   WN+MI  YA  G   EA           
Sbjct: 561 VSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEA----------- 609

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                            ++ F L  + ++E   P+  T   VL  C+  G +  G   H 
Sbjct: 610 -----------------LQVFRLMGEAEVE---PNYVTFVGVLSACAHAGFVGEGLN-HF 648

Query: 158 YAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
            ++K+ +D+   +     +V+++ +   +  A+   +  P       W ++++ 
Sbjct: 649 NSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSA 702


>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 248/657 (37%), Positives = 387/657 (58%), Gaps = 3/657 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D    N +++ Y   G L+EA+ +F+  P KN  +W+S+I GYS YG +  A  L+ QM 
Sbjct: 132 DMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQML 191

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G+ P  +T  ++++ CS     +   Q H + +K+ F  +      L+ MY K   + 
Sbjct: 192 RSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMA 251

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV-ESNQFTFPSILTA 244
           +A  +F      K+ ++W +MI G+SQ GY  +A+  FR+M  + V + N+F F S  +A
Sbjct: 252 DAINVFSRIII-KDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSA 310

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C+ +   D G Q+HG  +  G  ++++   +L DMYAKCG L+SAR +  + E  + V+W
Sbjct: 311 CSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAW 370

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N++I GFA     KE+ S F +M    +  +D T  S+L   +  + LN+   VHS IVK
Sbjct: 371 NAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVK 430

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGSYEEALK 423
            GF     V N+L+ MY+K  NL+ A  VF  + +K D++SW +L+T C       E L+
Sbjct: 431 MGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLR 490

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
               M  S I PDHV ++++L +  ++   E G Q+H   +KSG    +SV N+L+ +Y 
Sbjct: 491 LTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYT 550

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG +  A ++FDS+   D+I+W++LI+G AQ G GKEA + +  M   G KP+ ITFVG
Sbjct: 551 KCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVG 610

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           +L ACSH G+ E     + +M + Y I P  +H +CM+DLL R+G L  A+  + QM   
Sbjct: 611 ILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFV 670

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
           PD  VWK LL+AC+VHG+LE+G+RAA N+ +++P N+   V L N+++++G W+D AR+R
Sbjct: 671 PDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLR 730

Query: 664 KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
             M+   + K PG SW+E   +VH+F++ED  HP R  IY+ ++E+ML I + G  P
Sbjct: 731 SSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNLHPERGKIYTMLEELMLQILDDGCDP 787



 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 151/505 (29%), Positives = 264/505 (52%), Gaps = 15/505 (2%)

Query: 115 IEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
           ++AF++F +      +   YT  +++  CS    L+ G + H + +   +  +  +   +
Sbjct: 82  LKAFDIFQKCSSSPLKSVTYT--HLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHI 139

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           + MY KC  + EA  +F   P  KN V+WT+MI+GYS+ G    AI  +  M   G   +
Sbjct: 140 LSMYGKCGSLKEARNMFDSMP-LKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPD 198

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
            FTF SI+ +C+ +       Q+H  +L S F A++  Q+ALI MY K   +  A  +  
Sbjct: 199 HFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFS 258

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI-KIDDFTYPSVLNCFASNIDLN 353
              I + +SW SMI GF++ G+  EAL  F++M ++ + + ++F + S  +  +  ++ +
Sbjct: 259 RIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPD 318

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
             + +H L +K G     F   +L DMYAK G L+ A  VF  ++  D+++W ++I G A
Sbjct: 319 CGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFA 378

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
              + +E+  +FS MR +G+ P+ V V S+L AC+E  +L  G QVH+  +K G    + 
Sbjct: 379 SVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIP 438

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
           V NSL+ +Y+KC  +NDA +VF+ +  + D+++W  L+  C Q  +  E L+    M A 
Sbjct: 439 VCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFAS 498

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH----YACMIDLLGRSG 588
             KPD++T   +L +       + A +   S    + +K G +        +I++  + G
Sbjct: 499 RIKPDHVTLTNVLVSS-----GQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCG 553

Query: 589 KLIEAKALLDQMVGEPDATVWKALL 613
            L  A+ + D  +G PD   W +L+
Sbjct: 554 SLECARKMFDS-IGNPDIISWSSLI 577



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 135/480 (28%), Positives = 229/480 (47%), Gaps = 35/480 (7%)

Query: 216 GFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSA 275
             KA + F+      ++S   T+  ++ AC+++ + + G ++H  +L+  ++ ++ +Q+ 
Sbjct: 81  ALKAFDIFQKCSSSPLKS--VTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNH 138

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           ++ MY KCG L  AR + +   + N VSW SMI G++R G    A++L+ +M       D
Sbjct: 139 ILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPD 198

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
            FT+ S++   +   D   A+ +H+ ++K+ F       NALI MY K   +  A  VF+
Sbjct: 199 HFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFS 258

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC-PDHVVVSSILSACAELTVLE 454
            +  KD+ISW S+I G +  G   EAL +F +M    +  P+  V  S  SAC++L   +
Sbjct: 259 RIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPD 318

Query: 455 FGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCA 514
            G+Q+H + +K G  S L    SL  +YAKCG +  A  VF  +   D++ W A+I G A
Sbjct: 319 CGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFA 378

Query: 515 QNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPG- 573
                KE+  F+ QM   G  P+ +T + LL ACS   +  +           Y +K G 
Sbjct: 379 SVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHS-----YIVKMGF 433

Query: 574 -PDHYAC--MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAAN 630
             D   C  ++ +  +   L +A  + + +  + D   W  LL+AC       L +  A 
Sbjct: 434 NLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTAC-------LQQNQAG 486

Query: 631 NLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFI 690
            +  L  +          M+++  K +       L+ S  I      +  E  SQ+H FI
Sbjct: 487 EVLRLTKL----------MFASRIKPDHVTLTNVLVSSGQI------ASYEVGSQIHCFI 530



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/182 (21%), Positives = 79/182 (43%), Gaps = 41/182 (22%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           ++ AL++ ++  G ++ A ++F+ + + D  +W+++I  YA +G  +             
Sbjct: 541 VSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGK------------- 587

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH- 156
                             EAFELF  M+  G +P++ T   +L  CS  G+++ G + + 
Sbjct: 588 ------------------EAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYR 629

Query: 157 ----GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
                Y I    +      + +VD+ A+  C+  AE   K  P   + V W T++     
Sbjct: 630 TMQEDYRISPTKEH----CSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKV 685

Query: 213 NG 214
           +G
Sbjct: 686 HG 687


>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
          Length = 770

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 262/684 (38%), Positives = 384/684 (56%), Gaps = 15/684 (2%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           +L  C   G L      HG+  KT    + FV T LV+ Y +C    +A  LF   P+ +
Sbjct: 84  LLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPE-R 142

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           N V WT ++TGY+ N      +E F +M   G   + +T  + L AC A    D G QVH
Sbjct: 143 NVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVH 202

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
           G  +  G E+   + ++L  +YAK G LDSA R        N ++W +MI   A      
Sbjct: 203 GYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECV 262

Query: 319 E-ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
           E  LSLF  M    +  ++FT  SV++   + +DLN  K V +   K G E    V N+ 
Sbjct: 263 ELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNST 322

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY-----------HGSYEEALKYFS 426
           + +Y ++G  D A  +F  M+D  +I+W ++I+G A                 +AL  F 
Sbjct: 323 MYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFR 382

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
           D++ S + PD    SSILS C+ +  LE G+Q+HA  +KSG  S + V+++LV +Y KCG
Sbjct: 383 DLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCG 442

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
           CI DAN+ F  M TR  +TWT++I G +Q+G+ +EA+Q +++M   G +P+ ITFV LL 
Sbjct: 443 CIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLS 502

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ACS+AGL E A  YF+ M K Y I+P  DHY CMID+  R G++ +A + + +   EP+ 
Sbjct: 503 ACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNE 562

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
            +W +L++ CR HG++EL   AA+ L EL+P     Y+ L NMY +  +W+D ARVRKLM
Sbjct: 563 AIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVARVRKLM 622

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFAL 726
           K   +      SW+    +V+ F + DR HP  T++Y  ++ ++   K  GY P  N  L
Sbjct: 623 KQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEPYQNAEL 682

Query: 727 HNVEEEGKEIG--LAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
            + E++ K     L +HSE+LAVA GLL  P GA +R+ KN+ +C DCH+++K  S +  
Sbjct: 683 SDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITMCRDCHSSIKLFSLLEN 742

Query: 785 RHIILRDSNRFHHFKAGNCSCGDY 808
           R II+RDS R H FK G CSCGD+
Sbjct: 743 REIIVRDSKRLHKFKDGRCSCGDF 766



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 149/508 (29%), Positives = 265/508 (52%), Gaps = 24/508 (4%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G + +  +  D F   +++ AY   G  R+A++LF+  P +N  TW++L+ GY+      
Sbjct: 102 GHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQPA 161

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
              E+F +M   G  PS YTL   L  C     +  G+Q HGYAIK   +    +   L 
Sbjct: 162 LGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLC 221

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFK-AIECFRDMRVEGVESN 234
            +YAK   +  A   F   P+ KN + WTTMI+  +++    +  +  F DM ++GV  N
Sbjct: 222 SLYAKLGSLDSALRAFWRIPE-KNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMPN 280

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
           +FT  S+++ C      + G QV       G E N+ V+++ + +Y + G+ D A RL E
Sbjct: 281 EFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFE 340

Query: 295 YSEIDNEVSWNSMIVGFAR-------------QGFHKEALSLFKKMHARDIKIDDFTYPS 341
             E  + ++WN+MI G+A+             +GF  +AL++F+ +    +K D FT+ S
Sbjct: 341 QMEDASIITWNAMISGYAQIMDSAKDDLQARSRGF--QALTIFRDLKRSVMKPDLFTFSS 398

Query: 342 VLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
           +L+  ++ + L   + +H+  +K+GF     VN+AL++MY K G +  A   F  M  + 
Sbjct: 399 ILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRT 458

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
            ++WTS+I+G + HG  +EA++ F +MR++G+ P+ +   S+LSAC+   ++E  +  + 
Sbjct: 459 FVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEH-YF 517

Query: 462 VFLKSGGCSSLSVDN--SLVLVYAKCGCINDA-NRVFDSMHTRDVITWTALIMGCAQNGK 518
             +K   C    VD+   ++ ++ + G + DA + +  +    +   W++L+ GC  +G 
Sbjct: 518 DMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGN 577

Query: 519 GKEALQFYDQMLARGTKPDYI-TFVGLL 545
            + A    D++L    KP  I T++ LL
Sbjct: 578 MELAFYAADKLLE--LKPKGIETYILLL 603



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 219/469 (46%), Gaps = 43/469 (9%)

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M  EG       +  +L  C  + +      VHG +  +G  A+++V ++L++ Y +CG 
Sbjct: 69  MLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGA 128

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
              ARRL +     N V+W +++ G+         L +F +M         +T  + LN 
Sbjct: 129 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 188

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
             ++ D++  K VH   +K G E    + N+L  +YAK G+LD A   F  + +K+VI+W
Sbjct: 189 CLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITW 248

Query: 406 TSLITGCAY-HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
           T++I+ CA      E  L  F DM + G+ P+   ++S++S C     L  G+QV A   
Sbjct: 249 TTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSF 308

Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ--------- 515
           K G  ++L V NS + +Y + G  ++A R+F+ M    +ITW A+I G AQ         
Sbjct: 309 KIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDL 368

Query: 516 --NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IK 571
               +G +AL  +  +     KPD  TF  +L  CS       A    E  ++++   IK
Sbjct: 369 QARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCS-------AMMALEQGEQIHAQTIK 421

Query: 572 PG--PDHY--ACMIDLLGRSGKLIEA-KALLDQMVGEPDAT--VWKALLSACRVHGDLEL 624
            G   D    + ++++  + G + +A KA L+     P  T   W +++S    HG    
Sbjct: 422 SGFLSDVVVNSALVNMYNKCGCIQDANKAFLEM----PTRTFVTWTSMISGYSQHGQ--- 474

Query: 625 GERAANNLFE------LEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
             + A  LFE      + P N + +V L +  S AG  E+A     +MK
Sbjct: 475 -PQEAIQLFEEMRLAGVRP-NEITFVSLLSACSYAGLVEEAEHYFDMMK 521



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 154/325 (47%), Gaps = 24/325 (7%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  +   GE DEA +LFE+M D    TWN MI+ YA   ++ ++ K   +   + F 
Sbjct: 320 NSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYA---QIMDSAKDDLQARSRGF- 375

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
                           +A  +F  ++    +P  +T  ++L +CS    L++GEQ H   
Sbjct: 376 ----------------QALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQT 419

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           IK+ F  +  V + LV+MY KC CI +A   F   P  +  V WT+MI+GYSQ+G   +A
Sbjct: 420 IKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPT-RTFVTWTSMISGYSQHGQPQEA 478

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALID 278
           I+ F +MR+ GV  N+ TF S+L+AC+     +        +      E  V     +ID
Sbjct: 479 IQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMID 538

Query: 279 MYAKCGDLDSARRLLEYSEID-NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
           M+ + G ++ A   ++ +  + NE  W+S++ G    G  + A     K+     K  + 
Sbjct: 539 MFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIE- 597

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLI 362
           TY  +LN + S     +   V  L+
Sbjct: 598 TYILLLNMYISTERWQDVARVRKLM 622


>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 721

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 265/652 (40%), Positives = 388/652 (59%), Gaps = 12/652 (1%)

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
           N F    +V  YAK   I  A  LF   P   + V++ T+I+GY+       A+  F+ M
Sbjct: 73  NVFSYNVIVKAYAKDSKIHIARQLFDENPQ-PDTVSYNTLISGYADARETVAAMVLFKRM 131

Query: 227 RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDL 286
           R  G E + FT   ++ AC      D   Q+H   +S GF++   V +A +  Y+K G L
Sbjct: 132 RELGFEVDGFTLSGLIAACC--DRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLL 189

Query: 287 DSARRLLEYSE-IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
             A  +    + + +EVSWNSMIV + +     +AL+L+K+M  +  KID FT  SVLN 
Sbjct: 190 REAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA 249

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDC---AFMVFNLMQDKDV 402
             S   L   +  H  ++K GF     V + LID Y+K G  D    +  VF  +   D+
Sbjct: 250 LTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDL 309

Query: 403 ISWTSLITGCAYHGSY-EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
           + W ++I+G + +  + EEA+K F  M+  G  PD      + SAC+ L+    G+Q+H 
Sbjct: 310 VLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHG 369

Query: 462 VFLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGK 520
           + +KS   S+ +SV+N+L+ +Y K G + DA RVFD M   + +++  +I G AQ+G G 
Sbjct: 370 LAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGT 429

Query: 521 EALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACM 580
           EAL+ Y +ML  G  P+ ITFV +L AC+H G  +  + YF +M + + I+P  +HY+CM
Sbjct: 430 EALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCM 489

Query: 581 IDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNA 640
           IDLLGR+GKL EA+  +D M  +P +  W ALL ACR H ++ L ERAA  L  ++P+ A
Sbjct: 490 IDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLAA 549

Query: 641 MPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRT 700
            PYV L+NMY+ AGKWE+ A VRK M+ + IRK+PGCSW+E   + H+F++ED  HP+  
Sbjct: 550 TPYVMLANMYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIR 609

Query: 701 DIYSKIDEIMLLIKEAGYVPDMNFAL---HNVEEEGKEIGLAYHSEKLAVAFGLLTLPQG 757
           ++   ++E+M  +K+ GYV D  +A+       E  +E+ L +HSEKLAVAFGL++   G
Sbjct: 610 EVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGEEEMRLGHHSEKLAVAFGLMSTRDG 669

Query: 758 APIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             I + KNLR+CGDCH A+K++SAV  R II+RD+ RFH FK G CSCGDYW
Sbjct: 670 EEIVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 147/523 (28%), Positives = 266/523 (50%), Gaps = 10/523 (1%)

Query: 2   FKLDFKILNFSLRCRSKIIGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFE 60
           FK    +L  S+  R    G + +   V + V  ++ L+   V+ +S  G +  A   F+
Sbjct: 8   FKSFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFD 67

Query: 61  KMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFEL 120
              + + F++N ++ AYA   ++  A++LF+E P  +  ++++LI GY++    + A  L
Sbjct: 68  STEEPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVL 127

Query: 121 FWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK 180
           F +M+  G+    +TL  ++  C  +  L +  Q H +A+   FD  + V    V  Y+K
Sbjct: 128 FKRMRELGFEVDGFTLSGLIAACCDRVDLIK--QLHCFAVSGGFDSYSSVNNAFVTYYSK 185

Query: 181 CKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
              + EA  +F      ++ V+W +MI  Y Q+  G KA+  +++M  +G + + FT  S
Sbjct: 186 GGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLAS 245

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS---ARRLLEYSE 297
           +L A  ++     G Q HG ++ +GF  N +V S LID Y+KCG  D    + ++ +   
Sbjct: 246 VLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEIL 305

Query: 298 IDNEVSWNSMIVGFARQGFH-KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
             + V WN+MI G++    H +EA+  F++M     + DD ++  V +  ++    +  K
Sbjct: 306 SPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGK 365

Query: 357 SVHSLIVKTGFEGYKF-VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
            +H L +K+     +  VNNALI +Y K GNL  A  VF+ M + + +S+  +I G A H
Sbjct: 366 QIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQH 425

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G   EAL+ +  M  SGI P+++   +ILSACA    ++ GQ+      ++      +  
Sbjct: 426 GHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEH 485

Query: 476 NS-LVLVYAKCGCINDANRVFDSM-HTRDVITWTALIMGCAQN 516
            S ++ +  + G + +A R  D+M +    + W AL+  C ++
Sbjct: 486 YSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKH 528


>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 248/694 (35%), Positives = 387/694 (55%), Gaps = 39/694 (5%)

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQN 213
           + H   I      +      L+  YA  +    +  +F++     N   W ++I   + N
Sbjct: 34  KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHN 93

Query: 214 GYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
           G   +A+  + + +   ++ + +TFPS++ ACA +   +    +H  +L  GF +++Y+ 
Sbjct: 94  GLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIG 153

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS-------LFKK 326
           +ALIDMY +  DLD AR++ E   + + VSWNS+I G+   G+  EAL        LF +
Sbjct: 154 NALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFME 213

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
           M     K D  T  S+L       DL   K VH  ++ +G+E     +N LI+MYAK GN
Sbjct: 214 M-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGN 272

Query: 387 L----------DC---------------------AFMVFNLMQDKDVISWTSLITGCAYH 415
           L           C                     +  VF  M+ +D+I+W ++I  C + 
Sbjct: 273 LLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHS 332

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
                 L+  S MR  G+ PD   + SIL  C+ L     G+++H    K G  S + V 
Sbjct: 333 EDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVG 392

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           N L+ +Y+KCG + ++ +VF  M T+DV+TWTALI  C   G+GK+A++ + +M A G  
Sbjct: 393 NVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIV 452

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           PD++ FV ++FACSH+GL E    YF  M K Y I+P  +HYAC++DLL RS  L +A+ 
Sbjct: 453 PDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAED 512

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
            +  M  +PD+++W ALLSACR+ GD E+ ER +  + EL P +   YV +SN+Y+  GK
Sbjct: 513 FILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGK 572

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
           W+    +RK +K+RG++K+PGCSW+E  ++V++F +  +      ++   +  +  L+ +
Sbjct: 573 WDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAK 632

Query: 716 AGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
            GY+ ++ F LH+++E+ K   L  HSE+LA+AFGLL    G P+++ KNLRVC DCHT 
Sbjct: 633 EGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTV 692

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            KYIS +  R +++RD+NRFH FK G CSCGDYW
Sbjct: 693 TKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 726



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 158/584 (27%), Positives = 280/584 (47%), Gaps = 54/584 (9%)

Query: 37  SDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNT-MIAAYANSGRLREAKKLFN-ETP 94
           S ++RAL   + + ++ +   L   +       ++  +IA YA+      +  +F   +P
Sbjct: 17  SSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASP 76

Query: 95  FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLL--QRG 152
             N + W+S+I   ++ GL  EA  L+ + Q    +P  YT  +V+  C+  GLL  +  
Sbjct: 77  SNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACA--GLLDFEMA 134

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
           +  H   +   F  + ++   L+DMY +   + +A  +F+  P  ++ V+W ++I+GY+ 
Sbjct: 135 KSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMP-LRDVVSWNSLISGYNA 193

Query: 213 NGYGFKAIEC-FRDMRVEGVESNQF-----TFPSILTACAAVSARDFGAQVHGCILSSGF 266
           NGY  +A+E  ++ +++     NQF     T  SIL AC  +   +FG  VH  +++SG+
Sbjct: 194 NGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGY 253

Query: 267 EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK 326
           E +    + LI+MYAKCG+L +++ +    +  + VSWNSMI  + + G   ++L +F+ 
Sbjct: 254 ECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFEN 313

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDL-------------------------------NNA 355
           M ARDI   +    S ++    N+ L                                  
Sbjct: 314 MKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQG 373

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           K +H  I K G E    V N LI+MY+K G+L  +F VF LM+ KDV++WT+LI+ C  +
Sbjct: 374 KEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMY 433

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G  ++A++ F +M  +GI PDHV   +I+ AC+   ++E G        K          
Sbjct: 434 GEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEH 493

Query: 476 NSLVL-VYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
            + V+ + ++   ++ A     SM  + D   W AL+  C  +G  + A +  ++++   
Sbjct: 494 YACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIE-- 551

Query: 534 TKPD---YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
             PD   Y   V  ++A    G  +  R   +S+ K  G+K  P
Sbjct: 552 LNPDDTGYYVLVSNIYAA--LGKWDQVRSIRKSI-KARGLKKDP 592



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 161/365 (44%), Gaps = 26/365 (7%)

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
           + S+    AS         +HSLI+  G       +  LI  YA   +   +F VF L  
Sbjct: 16  FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 75

Query: 399 -DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
              +V  W S+I    ++G + EAL  +S+ +   + PD     S+++ACA L   E  +
Sbjct: 76  PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAK 135

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
            +H   L  G  S L + N+L+ +Y +   ++ A +VF+ M  RDV++W +LI G   NG
Sbjct: 136 SIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANG 195

Query: 518 KGKEALQFYDQM------LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIK 571
              EAL+ Y Q       +    KPD +T   +L AC H G  E  ++  + M    G +
Sbjct: 196 YWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYM-ITSGYE 254

Query: 572 PGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANN 631
                   +I++  + G L+ ++ +   M  + D+  W ++++    +G      +  ++
Sbjct: 255 CDTTASNILINMYAKCGNLLASQEVFSGMKCK-DSVSWNSMINVYIQNG------KMGDS 307

Query: 632 LFELEPMNAMPYVQLSNMYSTAGKWED---AARVRKLMKSRGIRKE--------PGCSWV 680
           L   E M A   +  + + ++    ED     R+   M++ G+  +        P CS +
Sbjct: 308 LKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLL 367

Query: 681 ETNSQ 685
               Q
Sbjct: 368 AAKRQ 372


>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 904

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 276/757 (36%), Positives = 415/757 (54%), Gaps = 35/757 (4%)

Query: 86  AKKLF-NETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCS 144
           AK++F N   +   F ++SLI GY++ GL  EA  LF +M   G  P +YT    L +C+
Sbjct: 85  AKEVFENGESYGTCFMYNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCA 144

Query: 145 LKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWT 204
                  G Q HG  IK  +  + FV   LV  YA+C  +  A  +F    + +N V+WT
Sbjct: 145 KSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSE-RNVVSWT 203

Query: 205 TMITGYSQNGYGFKAIECF-RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS 263
           +MI GY++  +   A++ F R +R E V  N  T   +++ACA +   + G +V+  I  
Sbjct: 204 SMICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRD 263

Query: 264 SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSL 323
           SG E N  + SAL+DMY KC  +D A+RL +     N    N+M   + RQG  KEAL +
Sbjct: 264 SGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGV 323

Query: 324 FKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK 383
              M    I+ D  +  S ++  +   ++   KS H  +++ GFE +  + NALIDMY K
Sbjct: 324 LNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMK 383

Query: 384 -------------------------------QGNLDCAFMVFNLMQDKDVISWTSLITGC 412
                                           G +D A+  FN M +K+++SW ++I+  
Sbjct: 384 CHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISAL 443

Query: 413 AYHGSYEEALKYFSDMRISG-ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
                YEEA++ F  M+    +  D V + SI SAC  L  L+  + ++    K+     
Sbjct: 444 VQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLD 503

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
           + +  +LV ++++CG    A  +F+S+  RDV  WTA I   A  G  + A++ +++M+ 
Sbjct: 504 VRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIE 563

Query: 532 RGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLI 591
           +G KPD + F+G L AC H GL +  +  F SM+K++G+ P   HY CM+DLLGR+G L 
Sbjct: 564 QGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLE 623

Query: 592 EAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYS 651
           EA  L+  M  EP+  +W +LL+ACRV G++E+   AA  +  L P     YV LSN+Y+
Sbjct: 624 EALQLIKDMPTEPNDVIWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNVYA 683

Query: 652 TAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIML 711
           +AG+W D A+VR  MK +G+RK PG S ++   + H F S D  HP    I + +DE+  
Sbjct: 684 SAGRWNDMAKVRLSMKEKGLRKPPGTSVIQIRGKTHEFTSGDESHPEMRKIEAMLDELSQ 743

Query: 712 LIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGD 771
              + G+VPD++  L +V+E+ K   L+ HSEKLA+AFGL++  +G  IRI KNLRVC  
Sbjct: 744 RASDLGHVPDLSNVLMDVDEQEKIFMLSRHSEKLAMAFGLISSNKGTTIRIVKNLRVCSY 803

Query: 772 CHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDY 808
           CH+  K+ S VY R IILRD+NRFH  + G CSC D+
Sbjct: 804 CHSFAKFASKVYNREIILRDNNRFHFIRQGKCSCSDF 840



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 145/541 (26%), Positives = 261/541 (48%), Gaps = 46/541 (8%)

Query: 13  LRCRSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNT 72
           +R  +  I P +YT   G SV   S       D  N  +I   G + +    +D F  N+
Sbjct: 122 IRMMNSGISPDKYTFPFGLSVCAKSR------DKGNGIQIH--GLIIKMDYAKDLFVQNS 173

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRP 131
           ++  YA  G L  A+K+F+E   +N  +W+S+I GY+      +A +LF++M + E   P
Sbjct: 174 LVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKDAVDLFFRMVRDEDVIP 233

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
           +  T+  V+  C+    L+ GE+ + +   +  ++N  +++ LVDMY KC  I  A+ LF
Sbjct: 234 NSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLF 293

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
             +    N      M + Y + G   +A+     M   G+  ++ +  S +++C+ +   
Sbjct: 294 DEY-GASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNI 352

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL------------------- 292
            +G   HG +L +GFE+   + +ALIDMY KC   D+A R+                   
Sbjct: 353 LWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGY 412

Query: 293 LEYSEID------------NEVSWNSMIVGFARQGFHKEALSLFKKMHARD-IKIDDFTY 339
           +E  E+D            N VSWN++I    ++  ++EA+ +F  M +++ + +D  T 
Sbjct: 413 IENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTM 472

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
            S+ +       L+ AK ++  I K   +    +   L+DM+++ G+ + A  +FN + +
Sbjct: 473 MSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN 532

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           +DV +WT+ I   A  G+ E A++ F++M   G+ PD VV    L+AC    +++ G+++
Sbjct: 533 RDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEI 592

Query: 460 HAVFLKSGGCSSLSVD-NSLVLVYAKCGCINDANRVFDSMHTR--DVITWTALIMGCAQN 516
                K  G S   V    +V +  + G + +A ++   M T   DVI W +L+  C   
Sbjct: 593 FNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVI-WNSLLAACRVQ 651

Query: 517 G 517
           G
Sbjct: 652 G 652


>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 760

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 252/729 (34%), Positives = 405/729 (55%), Gaps = 71/729 (9%)

Query: 151 RGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
           +  Q H   +K+    + ++   L+  Y+   C  +A+ + +  PD   + +++++I   
Sbjct: 33  KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVY-SFSSLIYAL 91

Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV 270
           ++     ++I  F  M   G+  +    P++   CA +SA   G Q+H     SG + + 
Sbjct: 92  TKAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDA 151

Query: 271 YVQSALIDMYAKCGDLDSARRL----------------------------------LEYS 296
           +VQ +L  MY +CG +  AR++                                  +E S
Sbjct: 152 FVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKS 211

Query: 297 EID-NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
            I+ N VSWN ++ GF R G+HKEA+ +F+KMH      D  T  SVL     + +LN  
Sbjct: 212 GIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMG 271

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGN----------------------------- 386
           + +H  ++K G    K V +A++DMY K G+                             
Sbjct: 272 RQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRN 331

Query: 387 --LDCAFMVFNLMQDK----DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVV 440
             +D A  +F L +++    +V+SWTS+I GCA +G   EAL+ F +M+++G+ P+ V +
Sbjct: 332 GLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTI 391

Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT 500
            S+L AC  +  L  G+  H   ++      + V ++L+ +YAKCG I  +  VF+ M T
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPT 451

Query: 501 RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWY 560
           ++++ W +L+ G + +GK KE +  ++ ++    KPD+I+F  LL AC   GL +    Y
Sbjct: 452 KNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKY 511

Query: 561 FESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
           F  M + YGIKP  +HY+CM++LLGR+GKL EA  L+ ++  EPD+ VW ALL++CR+  
Sbjct: 512 FNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQN 571

Query: 621 DLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWV 680
           +++L E AA  LF LEP N   YV +SN+Y+  G W +   +R  M+S G++K PGCSW+
Sbjct: 572 NVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWI 631

Query: 681 ETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAY 740
           +  ++V+  ++ D+ HP    I  K+DEI   ++++G+ P+++FAL +VEE+ +E  L  
Sbjct: 632 QVKNKVYTLLACDKSHPQIDQITEKMDEISEEMRKSGHRPNLDFALQDVEEQEQEQMLWG 691

Query: 741 HSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKA 800
           HSEKLAV FGLL  P G P+++ KNLR+CGDCH  +K+IS+   R I +RD+NRFHHFK 
Sbjct: 692 HSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKD 751

Query: 801 GNCSCGDYW 809
           G CSCGD+W
Sbjct: 752 GICSCGDFW 760



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 129/529 (24%), Positives = 232/529 (43%), Gaps = 71/529 (13%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            ++ +  +  DG+    +IA+Y+N     +A  +    P    +++SSLIY  +   L  
Sbjct: 39  ARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLFS 98

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           ++  +F +M   G  P  + L N+ ++C+     + G+Q H  A  +  D++AFV   L 
Sbjct: 99  QSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLF 158

Query: 176 DMYAKCKCIFEAEYLFKMFPDG----------------------------------KNHV 201
            MY +C  + +A  +F    +                                    N V
Sbjct: 159 HMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIV 218

Query: 202 AWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI 261
           +W  +++G++++GY  +A+  F+ M   G   +Q T  S+L +       + G Q+HG +
Sbjct: 219 SWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYV 278

Query: 262 LSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID---------------------- 299
           +  G   +  V SA++DMY K G +    +L +  E+                       
Sbjct: 279 IKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKAL 338

Query: 300 -------------NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCF 346
                        N VSW S+I G A+ G   EAL LF++M    +K +  T PS+L   
Sbjct: 339 EMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPAC 398

Query: 347 ASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWT 406
            +   L + +S H   V+        V +ALIDMYAK G +  + +VFN+M  K+++ W 
Sbjct: 399 GNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWN 458

Query: 407 SLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
           SL+ G + HG  +E +  F  +  + + PD +  +S+LSAC ++ + + G +   +  + 
Sbjct: 459 SLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEE 518

Query: 467 GGCSS-LSVDNSLVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMGC 513
            G    L   + +V +  + G + +A  +   +    D   W AL+  C
Sbjct: 519 YGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSC 567



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 126/480 (26%), Positives = 232/480 (48%), Gaps = 48/480 (10%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK----NFFTWSSLI 105
           G + +A ++F++MS++D  T + ++  YA  G L E  ++ +E        N  +W+ ++
Sbjct: 165 GRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGIL 224

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            G++  G   EA  +F +M   G+ P Q T+ +VL        L  G Q HGY IK    
Sbjct: 225 SGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLL 284

Query: 166 LNAFVVTGLVDMYAKCKCIF-------------------------------EAEYLFKMF 194
            +  V++ ++DMY K   ++                               +A  +F +F
Sbjct: 285 KDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLF 344

Query: 195 PDGK---NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
            + K   N V+WT++I G +QNG   +A+E FR+M+V GV+ N+ T PS+L AC  ++A 
Sbjct: 345 KEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAAL 404

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
             G   HG  +      +V+V SALIDMYAKCG +  ++ +       N V WNS++ G+
Sbjct: 405 GHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGY 464

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGY 370
           +  G  KE +S+F+ +    +K D  ++ S+L+ C    +     K  + +  + G +  
Sbjct: 465 SMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPR 524

Query: 371 KFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
               + ++++  + G L  A+ ++  +  + D   W +L+  C    + +  L   +  +
Sbjct: 525 LEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVD--LAEIAAQK 582

Query: 430 ISGICPD----HVVVSSILSACAELT-VLEFGQQVHAVFLKSG-GCSSLSVDNSLVLVYA 483
           +  + P+    +V++S+I +A    T V     ++ ++ LK   GCS + V N +  + A
Sbjct: 583 LFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNKVYTLLA 642


>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 748

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 262/741 (35%), Positives = 397/741 (53%), Gaps = 74/741 (9%)

Query: 142 LCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY---LFKMFPDGK 198
           L S    L +  Q H   ++     +  + T L+  YA    +   +    L    P   
Sbjct: 9   LSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPH-P 67

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
              +++++I  ++++ +    +  F  +    +  + F  PS + +CA++ A D G Q+H
Sbjct: 68  TLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLH 127

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE----------------YSEI---- 298
               +SGF  +  V S+L  MY KC  +  AR+L +                YS +    
Sbjct: 128 AFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVE 187

Query: 299 ---------------DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
                           N VSWN M+ GF   GF+ EA+ +F+ M  +    D  T   VL
Sbjct: 188 EAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVL 247

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK-------------------- 383
                  D+     VH  ++K G    KFV +A++DMY K                    
Sbjct: 248 PAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIG 307

Query: 384 -----------QGNLDCAFMVFNLMQDK----DVISWTSLITGCAYHGSYEEALKYFSDM 428
                       G +D A  VFN  +D+    +V++WTS+I  C+ +G   EAL+ F DM
Sbjct: 308 SLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDM 367

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
           +  G+ P+ V + S++ AC  ++ L  G+++H   L+ G    + V ++L+ +YAKCG I
Sbjct: 368 QAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRI 427

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
             A R FD M   ++++W A++ G A +GK KE ++ +  ML  G KPD +TF  +L AC
Sbjct: 428 QLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSAC 487

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           +  GL E     + SM + +GI+P  +HYAC++ LL R GKL EA +++ +M  EPDA V
Sbjct: 488 AQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACV 547

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           W ALLS+CRVH +L LGE AA  LF LEP N   Y+ LSN+Y++ G W++  R+R++MKS
Sbjct: 548 WGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKS 607

Query: 669 RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHN 728
           +G+RK PG SW+E   +VH+ ++ D+ HP   DI  K+D++ + +K++GY+P  NF L +
Sbjct: 608 KGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSGYLPKTNFVLQD 667

Query: 729 VEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHII 788
           VEE+ KE  L  HSEKLAV  GLL    G P+++ KNLR+C DCH  +K IS +  R I 
Sbjct: 668 VEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGREIY 727

Query: 789 LRDSNRFHHFKAGNCSCGDYW 809
           +RD+NRFHHFK G CSCGD+W
Sbjct: 728 VRDTNRFHHFKDGVCSCGDFW 748



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 132/438 (30%), Positives = 200/438 (45%), Gaps = 76/438 (17%)

Query: 54  EAGQLFEKMSDRDGFTWNTMIAA-----YANSGRLREAKKLFNETPFKNFFTWSSLIYGY 108
           + GQ     +   GF  ++++A+     Y    R+ +A+KLF+  P ++   WS++I GY
Sbjct: 121 DPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGY 180

Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVL----------------RLCSLKGL---- 148
           S  GL  EA ELF +M+  G  P+  + + +L                R+  ++G     
Sbjct: 181 SRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDG 240

Query: 149 ---------------LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE------- 186
                          +  G Q HGY IK     + FVV+ ++DMY KC C+ E       
Sbjct: 241 STVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDE 300

Query: 187 ------------------------AEYLFKMFPDGK---NHVAWTTMITGYSQNGYGFKA 219
                                   A  +F  F D K   N V WT++I   SQNG   +A
Sbjct: 301 VEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEA 360

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           +E FRDM+  GVE N  T PS++ AC  +SA   G ++H   L  G   +VYV SALIDM
Sbjct: 361 LELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDM 420

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           YAKCG +  ARR  +     N VSWN+++ G+A  G  KE + +F  M     K D  T+
Sbjct: 421 YAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTF 480

Query: 340 PSVLNCFASN-IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
             VL+  A N +     +  +S+  + G E        L+ + ++ G L+ A+ +   M 
Sbjct: 481 TCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMP 540

Query: 399 -DKDVISWTSLITGCAYH 415
            + D   W +L++ C  H
Sbjct: 541 FEPDACVWGALLSSCRVH 558



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 137/518 (26%), Positives = 224/518 (43%), Gaps = 76/518 (14%)

Query: 71  NTMIAAYANSGRLREAK---KLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
            ++++ YAN+  L   +    L +  P    F++SSLI+ ++           F  +   
Sbjct: 39  TSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPL 98

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
              P  + L + ++ C+    L  G+Q H +A  + F  ++ V + L  MY KC  I +A
Sbjct: 99  RLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDA 158

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF----------- 236
             LF   PD ++ V W+ MI GYS+ G   +A E F +MR  GVE N             
Sbjct: 159 RKLFDRMPD-RDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGN 217

Query: 237 ------------------------TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYV 272
                                   T   +L A   +     GAQVHG ++  G  ++ +V
Sbjct: 218 NGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFV 277

Query: 273 QSALIDMYAKCGDLDSARRLL-EYSEID-------------------------------- 299
            SA++DMY KCG +    R+  E  E++                                
Sbjct: 278 VSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKM 337

Query: 300 --NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
             N V+W S+I   ++ G   EAL LF+ M A  ++ +  T PS++    +   L + K 
Sbjct: 338 ELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKE 397

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           +H   ++ G     +V +ALIDMYAK G +  A   F+ M   +++SW +++ G A HG 
Sbjct: 398 IHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGK 457

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS-LSVDN 476
            +E ++ F  M  SG  PD V  + +LSACA+  + E G + +    +  G    +    
Sbjct: 458 AKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYA 517

Query: 477 SLVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMGC 513
            LV + ++ G + +A  +   M    D   W AL+  C
Sbjct: 518 CLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSC 555



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 130/261 (49%), Gaps = 11/261 (4%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK---- 96
           A++D +   G + E  ++F+++ + +  + N  +   + +G +  A ++FN+  FK    
Sbjct: 280 AMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNK--FKDQKM 337

Query: 97  --NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ 154
             N  TW+S+I   S  G D+EA ELF  MQ  G  P+  T+ +++  C     L  G++
Sbjct: 338 ELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKE 397

Query: 155 FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
            H ++++     + +V + L+DMYAKC  I  A   F       N V+W  ++ GY+ +G
Sbjct: 398 IHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKM-SALNLVSWNAVMKGYAMHG 456

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQ 273
              + +E F  M   G + +  TF  +L+ACA     + G + +  +    G E  +   
Sbjct: 457 KAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHY 516

Query: 274 SALIDMYAKCGDLDSARRLLE 294
           + L+ + ++ G L+ A  +++
Sbjct: 517 ACLVTLLSRVGKLEEAYSIIK 537


>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 953

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 261/746 (34%), Positives = 412/746 (55%), Gaps = 15/746 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N +++ Y   G + +A KLF+  P +N  +W+S+I  +S+ G D           
Sbjct: 221 DLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGDD----------- 269

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
              + P   T+  VL +C+ +  +  G+  HG+A+K   D    V   L+DMY+K  CI 
Sbjct: 270 -GAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCII 328

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV--EGVESNQFTFPSILT 243
           +++ +FK+  + KN V+W TM+ G+S  G      +  R M    E V++++ T  + + 
Sbjct: 329 DSQMIFKL-NNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVP 387

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
            C   S      ++H   L   F  +  + +A +  YAKCG L  A+R+          S
Sbjct: 388 VCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNS 447

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN++I G+A+    + +L    +M    +  D+FT  S+L+  +    L   K VH  I+
Sbjct: 448 WNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFII 507

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           +   E   FV  +++ +Y   G L    ++F+ M+D  ++SW ++ITG   +G  E AL 
Sbjct: 508 RNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALG 567

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            F  M + GI P  + + ++  AC+ L  L  G++ HA  LK     +  +  S++ +YA
Sbjct: 568 LFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYA 627

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           K G I  +++VF+ +  +   +W A+IMG   +G+ KEA++ +++M   G  PD +TF+G
Sbjct: 628 KNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLG 687

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           +L AC+H+GL      Y + M   +G+KP   HYAC+ID+LGR+G+L  A  +  +M  E
Sbjct: 688 VLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEE 747

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
           PD  +W +LLS CR+H +LE+GE+ A  LF LEP     YV LSN+Y+  GKW+D  +VR
Sbjct: 748 PDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVR 807

Query: 664 KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMN 723
           + MK   +RK+ GCSW+E N +V  F+  +R      +I S    + + I + GY PD +
Sbjct: 808 QRMKEMSLRKDAGCSWIELNGKVFSFVVGERFLDGFEEIKSLWSILEMKIWKMGYRPDTS 867

Query: 724 FALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVY 783
              H++ EE K   L  HSEKLA+ +GL+   +G  +R++KNLR+C DCH A K IS V 
Sbjct: 868 SVQHDLSEEEKIEQLRGHSEKLAITYGLIKTSEGTTLRVYKNLRICVDCHNAAKLISKVM 927

Query: 784 LRHIILRDSNRFHHFKAGNCSCGDYW 809
            R I++RD+ RFHHF  G CSCGDYW
Sbjct: 928 EREIVVRDNKRFHHFNKGFCSCGDYW 953



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 180/630 (28%), Positives = 294/630 (46%), Gaps = 55/630 (8%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGY-RP 131
           +I  YA  G   +++  F+    KN F W+++I  YS   L  E  E+F +M  + +  P
Sbjct: 126 IITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLP 185

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
             +T   V++ C+    +  G   HG  +KT    + FV   LV  Y     + +A  LF
Sbjct: 186 DNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLF 245

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
            + P+ +N V+W +MI  +S NG     +             +  T  ++L  CA     
Sbjct: 246 DIMPE-RNLVSWNSMIRVFSDNGDDGAFM------------PDVATVVTVLPVCAREREI 292

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
             G  VHG  +    +  + V +AL+DMY+K G +  ++ + + +   N VSWN+M+ GF
Sbjct: 293 GVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGF 352

Query: 312 ARQGFHKEALSLFKKMHA--RDIKIDDFT-YPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
           + +G       L ++M A   D+K D+ T   +V  CF  ++ L + K +H   +K  F 
Sbjct: 353 SAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESV-LPSLKELHCYSLKQEFV 411

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
             + + NA +  YAK G+L  A  VF+ ++ K + SW +LI G A       +L     M
Sbjct: 412 YDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQM 471

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
           + SG+ PD+  V S+LSAC++L  L  G++VH   +++     L V  S++ +Y  CG +
Sbjct: 472 KNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGEL 531

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
                +FD+M    +++W  +I G  QNG  + AL  + QM+  G +P  I+ + +  AC
Sbjct: 532 CTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGAC 591

Query: 549 S-----------HAG-----LAENARWYFESMD------------KVY-GIK-PGPDHYA 578
           S           HA      L +NA      +D            KV+ G+K      + 
Sbjct: 592 SLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWN 651

Query: 579 CMIDLLGRSGKLIEAKALLDQMV---GEPDATVWKALLSACRVHGDLELGERAANNL--- 632
            MI   G  G+  EA  L ++M      PD   +  +L+AC   G L  G R  + +   
Sbjct: 652 AMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSS 711

Query: 633 FELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
           F L+P N   Y  + +M   AG+ ++A RV
Sbjct: 712 FGLKP-NLKHYACVIDMLGRAGQLDNALRV 740



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 228/454 (50%), Gaps = 5/454 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D++    N ++  Y+  G + +++ +F     KN  +W++++ G+S  G     F+L  Q
Sbjct: 308 DKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQ 367

Query: 124 MQL--EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
           M    E  +  + T+ N + +C  + +L   ++ H Y++K  F  +  +    V  YAKC
Sbjct: 368 MLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKC 427

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
             +  A+ +F      K   +W  +I GY+Q+     +++    M+  G+  + FT  S+
Sbjct: 428 GSLSYAQRVFHGIR-SKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSL 486

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           L+AC+ + +   G +VHG I+ +  E +++V  +++ +Y  CG+L + + L +  E ++ 
Sbjct: 487 LSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSL 546

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           VSWN++I G  + GF + AL LF++M    I+    +  +V    +    L   +  H+ 
Sbjct: 547 VSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAY 606

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
            +K   E   F+  ++IDMYAK G +  +  VFN +++K   SW ++I G   HG  +EA
Sbjct: 607 ALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEA 666

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVL 480
           +K F +M+ +G  PD +    +L+AC    +L  G +       S G   +L     ++ 
Sbjct: 667 IKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVID 726

Query: 481 VYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
           +  + G +++A RV   M    DV  W +L+  C
Sbjct: 727 MLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWC 760



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 183/382 (47%), Gaps = 18/382 (4%)

Query: 172 TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG- 230
           T ++ MYA C    ++   F      KN   W  +I+ YS+N    + +E F  M  +  
Sbjct: 124 TRIITMYAMCGSPDDSRSAFDALR-SKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTH 182

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           +  + FTFP ++ ACA +S    G  VHG ++ +G   +++V +AL+  Y   G +  A 
Sbjct: 183 LLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDAL 242

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
           +L +     N VSWNSMI  F+  G     +             D  T  +VL   A   
Sbjct: 243 KLFDIMPERNLVSWNSMIRVFSDNGDDGAFMP------------DVATVVTVLPVCARER 290

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           ++   K VH   VK   +    VNNAL+DMY+K G +  + M+F L  +K+V+SW +++ 
Sbjct: 291 EIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVG 350

Query: 411 GCAYHGSYEEALKYFSDMRISG---ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG 467
           G +  G           M ++G   +  D V + + +  C + +VL   +++H   LK  
Sbjct: 351 GFSAEGDIHGTFDLLRQM-LAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQE 409

Query: 468 GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYD 527
                 + N+ V  YAKCG ++ A RVF  + ++ + +W ALI G AQ+   + +L  + 
Sbjct: 410 FVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHL 469

Query: 528 QMLARGTKPDYITFVGLLFACS 549
           QM   G  PD  T   LL ACS
Sbjct: 470 QMKNSGLLPDNFTVCSLLSACS 491



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 151/313 (48%), Gaps = 18/313 (5%)

Query: 241 ILTACAAVSARDFGAQVHGCIL-SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
           +L A       + G ++H  +  S+   ++  + + +I MYA CG  D +R   +     
Sbjct: 90  LLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSK 149

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNIDLNNAKSV 358
           N   WN++I  ++R   + E L +F KM ++  +  D+FT+P V+   A   D+    +V
Sbjct: 150 NLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAV 209

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           H L+VKTG     FV NAL+  Y   G +  A  +F++M +++++SW S+I         
Sbjct: 210 HGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMI--------- 260

Query: 419 EEALKYFSDMRISG-ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
               + FSD    G   PD   V ++L  CA    +  G+ VH   +K      L V+N+
Sbjct: 261 ----RVFSDNGDDGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNA 316

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA--RGTK 535
           L+ +Y+K GCI D+  +F   + ++V++W  ++ G +  G          QMLA     K
Sbjct: 317 LMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVK 376

Query: 536 PDYITFVGLLFAC 548
            D +T +  +  C
Sbjct: 377 ADEVTILNAVPVC 389



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 31/110 (28%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++ +G I ++ ++F  + ++   +WN MI  Y   GR +EA KLF E             
Sbjct: 626 YAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEE------------- 672

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
                             MQ  G  P   T   VL  C+  GLL  G ++
Sbjct: 673 ------------------MQRTGRNPDDLTFLGVLTACNHSGLLHEGLRY 704


>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
          Length = 672

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 261/644 (40%), Positives = 374/644 (58%), Gaps = 33/644 (5%)

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           N + W TM  G++ N     A++ +  M   G+  N ++FP +L +CA   A   G Q+H
Sbjct: 29  NLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKALIEGQQIH 88

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLD------------------------------- 287
           G +L  G++ ++YV ++LI MYA+ G L+                               
Sbjct: 89  GHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYIN 148

Query: 288 SARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFA 347
           +AR+L +   + + VSWN+MI G+      KEAL L+K M   ++K D+ T  +V++  A
Sbjct: 149 NARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACA 208

Query: 348 SNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTS 407
            +  +   + +HS I   GF     + N LID+Y+K G ++ A  +F  +  KDVISW +
Sbjct: 209 QSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNT 268

Query: 408 LITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK-- 465
           LI G  +   Y+EAL  F +M  SG  P+ V + S+L ACA L  ++ G+ +H    K  
Sbjct: 269 LIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRL 328

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
            G  ++ S+  SL+ +YAKCG I  A +VFDSM TR + +W A+I G A +GK   A   
Sbjct: 329 KGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDL 388

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
           + +M   G  PD ITFVGLL ACSH+G+ +  R  F SM + Y I P  +HY CMIDLLG
Sbjct: 389 FSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLG 448

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ 645
             G   EAK ++  M  EPD  +W +LL AC++H ++ELGE  A NL ++EP N   YV 
Sbjct: 449 HCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPGSYVL 508

Query: 646 LSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSK 705
           LSN+Y+TAG+W+  A++R L+  +GI+K PGCS +E +S VH FI  D+ HP   +IY  
Sbjct: 509 LSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFIIGDKFHPRNREIYRM 568

Query: 706 IDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKN 765
           ++E+ +L++E G+VPD +  L  +EEE KE  L +HSEKLA+AFGL++   G  + I KN
Sbjct: 569 LEEMEMLMEETGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKN 628

Query: 766 LRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           LRVC +CH A K IS +Y R II RD  R H  K G  SC DYW
Sbjct: 629 LRVCRNCHEATKLISKIYKREIIARDRTRLHLLKDGVWSCHDYW 672



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 226/465 (48%), Gaps = 34/465 (7%)

Query: 83  LREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRL 142
           L  A  +F      N   W+++  G++     + A +L+  M   G  P+ Y+   +L+ 
Sbjct: 15  LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74

Query: 143 CSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF----------- 191
           C+    L  G+Q HG+ +K  +DL+ +V T L+ MYA+   + +A  +F           
Sbjct: 75  CAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSY 134

Query: 192 -----------------KMFPD--GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
                            K+F +   K+ V+W  MI+GY +     +A+E ++DM    V+
Sbjct: 135 TALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVK 194

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
            ++ T  ++++ACA   + + G Q+H  I   GF +N+ + + LID+Y+KCG++++A  L
Sbjct: 195 PDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGL 254

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
            +     + +SWN++I G      +KEAL LF++M       +D T  SVL   A    +
Sbjct: 255 FQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAI 314

Query: 353 NNAKSVHSLIVK--TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           +  + +H  I K   G      +  +LIDMYAK G+++ A  VF+ M  + + SW ++I 
Sbjct: 315 DIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIF 374

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
           G A HG    A   FS MR +GI PD +    +LSAC+   +L+ G+ +     +    +
Sbjct: 375 GFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKIT 434

Query: 471 -SLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
             L     ++ +   CG   +A  +  +M    D + W +L+  C
Sbjct: 435 PKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKAC 479



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 237/482 (49%), Gaps = 32/482 (6%)

Query: 16  RSKIIGPARYTHNVGNSVKPASDL----NRALVD-FSNSGEIDEAGQLFEKMSDRDGFTW 70
           +SK +   +  H  G+ +K   DL    N +L+  ++ +G +++A ++F++ S R   ++
Sbjct: 77  KSKALIEGQQIH--GHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSY 134

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
             +I  YA+ G +  A+KLF+E   K+  +W+++I GY       EA EL+  M     +
Sbjct: 135 TALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVK 194

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P + T+  V+  C+  G ++ G Q H +     F  N  +V  L+D+Y+KC  +  A  L
Sbjct: 195 PDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGL 254

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F+     K+ ++W T+I G++      +A+  F++M   G   N  T  S+L ACA + A
Sbjct: 255 FQGLAK-KDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGA 313

Query: 251 RDFGAQVHGCILS--SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
            D G  +H  I     G      + ++LIDMYAKCGD+++A+++ +     +  SWN+MI
Sbjct: 314 IDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMI 373

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
            GFA  G    A  LF KM    I  DD T+  +L+  + +  L+  +     I ++  +
Sbjct: 374 FGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRH----IFRSMSQ 429

Query: 369 GYKFVNN-----ALIDMYAKQGNL-DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
            YK          +ID+    G   +   M+  +  + D + W SL+  C  H + E   
Sbjct: 430 DYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGE 489

Query: 423 KYFSDM-RISGICP-DHVVVSSILSAC------AELTVLEFGQQVHAVFLKSGGCSSLSV 474
            Y  ++ +I    P  +V++S+I +        A++  L   + +     K+ GCSS+ +
Sbjct: 490 SYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIK----KAPGCSSIEI 545

Query: 475 DN 476
           D+
Sbjct: 546 DS 547



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 114/258 (44%), Gaps = 33/258 (12%)

Query: 387 LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSA 446
           L  A  +F  +Q+ +++ W ++  G A +     ALK +  M   G+ P+      +L +
Sbjct: 15  LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITW 506
           CA+   L  GQQ+H   LK G    + V+ SL+ +YA+ G + DA++VFD    R V+++
Sbjct: 75  CAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSY 134

Query: 507 TALIMGCAQNG-------------------------------KGKEALQFYDQMLARGTK 535
           TALI G A  G                                 KEAL+ Y  M+    K
Sbjct: 135 TALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVK 194

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           PD  T V ++ AC+ +G  E  R    S  + +G          +IDL  + G+ +E   
Sbjct: 195 PDESTMVTVVSACAQSGSIELGR-QLHSWIEDHGFGSNIKIVNVLIDLYSKCGE-VETAC 252

Query: 596 LLDQMVGEPDATVWKALL 613
            L Q + + D   W  L+
Sbjct: 253 GLFQGLAKKDVISWNTLI 270


>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
          Length = 630

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 250/636 (39%), Positives = 377/636 (59%), Gaps = 17/636 (2%)

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
           ++  +A    +  A + F + P+ K+ V+W  M+  Y +NG   +A   F       V S
Sbjct: 12  MISSHANHGLVSLARHYFDLAPE-KDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVIS 70

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
                   +       AR+   ++ G         +V   + ++  YA+ GD+  ARRL 
Sbjct: 71  WNALMSGYVQWGKMSEARELFDRMPG--------RDVVSWNIMVSGYARRGDMVEARRLF 122

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
           + + + +  +W +++ G+A+ G  +EA  +F  M  R+      ++ +++  +     ++
Sbjct: 123 DAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNA----VSWNAMVAAYIQRRMMD 178

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
            AK + +++       +    N ++  YA+ G L+ A  VF+ M  KD +SW +++   +
Sbjct: 179 EAKELFNMMPCRNVASW----NTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYS 234

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
             G  EE L+ F +M   G   +    + +LS CA++  LE G Q+H   +++G      
Sbjct: 235 QGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCF 294

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
           V N+L+ +Y KCG + DA   F+ M  RDV++W  +I G A++G GKEAL+ +D M    
Sbjct: 295 VGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTS 354

Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
           TKPD IT VG+L ACSH+GL E    YF SM   +G+   P+HY CMIDLLGR+G+L EA
Sbjct: 355 TKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEA 414

Query: 594 KALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTA 653
             L+  M  EPD+T+W ALL A R+H + ELG  AA  +FELEP NA  YV LSN+Y+++
Sbjct: 415 HDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASS 474

Query: 654 GKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLI 713
           GKW DA ++R +M+ RG++K PG SW+E  ++VH F + D  HP +  IY+ ++++ + +
Sbjct: 475 GKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDMRM 534

Query: 714 KEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCH 773
           K+AGYV   +  LH+VEEE KE  L YHSEKLAVA+G+L +P G PIR+ KNLRVCGDCH
Sbjct: 535 KKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGDCH 594

Query: 774 TAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            A KYISA+  R I+LRDSNRFHHF+ G+CSCGDYW
Sbjct: 595 NAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 630



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 193/387 (49%), Gaps = 21/387 (5%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  +   G++ EA +LF++M  RD  +WN M++ YA  G + EA++LF+  P ++ F
Sbjct: 72  NALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVF 131

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           TW++++ GY+  G+  EA  +F  M      P +  +     + +        E    + 
Sbjct: 132 TWTAVVSGYAQNGMLEEARRVFDAM------PERNAVSWNAMVAAYIQRRMMDEAKELFN 185

Query: 160 IKTCFDLNAF--VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
           +  C ++ ++  ++TG    YA+   + EA+ +F   P  K+ V+W  M+  YSQ G   
Sbjct: 186 MMPCRNVASWNTMLTG----YAQAGMLEEAKAVFDTMPQ-KDAVSWAAMLAAYSQGGCSE 240

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           + ++ F +M   G   N+  F  +L+ CA ++A + G Q+HG ++ +G+    +V +AL+
Sbjct: 241 ETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALL 300

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
            MY KCG+++ AR   E  E  + VSWN+MI G+AR GF KEAL +F  M     K DD 
Sbjct: 301 AMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDI 360

Query: 338 TYPSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
           T   VL  C  S +        +S+    G          +ID+  + G L  A    +L
Sbjct: 361 TLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEA---HDL 417

Query: 397 MQD----KDVISWTSLITGCAYHGSYE 419
           M+D     D   W +L+     H + E
Sbjct: 418 MKDMPFEPDSTMWGALLGASRIHRNPE 444



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 117/243 (48%), Gaps = 22/243 (9%)

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           N +I  +A  G +  A   F+L  +KD +SW  ++     +G  EEA   F+    S   
Sbjct: 10  NVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFN----SRTE 65

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
            D +  ++++S   +   +    +   +F +  G   +S  N +V  YA+ G + +A R+
Sbjct: 66  WDVISWNALMSGYVQWGKM---SEARELFDRMPGRDVVSW-NIMVSGYARRGDMVEARRL 121

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
           FD+   RDV TWTA++ G AQNG  +EA + +D M  R      +++  ++ A     + 
Sbjct: 122 FDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNA----VSWNAMVAAYIQRRMM 177

Query: 555 ENARWYFESMDKVYGIKPGPD--HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
           + A+  F  M       P  +   +  M+    ++G L EAKA+ D M  + DA  W A+
Sbjct: 178 DEAKELFNMM-------PCRNVASWNTMLTGYAQAGMLEEAKAVFDTMP-QKDAVSWAAM 229

Query: 613 LSA 615
           L+A
Sbjct: 230 LAA 232



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 15/173 (8%)

Query: 498 MHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENA 557
           M  RD +T+  +I   A +G    A  ++D       + D +++ G+L A    G  E A
Sbjct: 1   MPVRDSVTYNVMISSHANHGLVSLARHYFDL----APEKDAVSWNGMLAAYVRNGRVEEA 56

Query: 558 RWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACR 617
           R  F S  +   I      +  ++    + GK+ EA+ L D+M G  D   W  ++S   
Sbjct: 57  RGLFNSRTEWDVIS-----WNALMSGYVQWGKMSEARELFDRMPGR-DVVSWNIMVSGYA 110

Query: 618 VHGDLELGERAANNLFELEPM-NAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
             GD+    R    LF+  P+ +   +  + + Y+  G  E+A RV   M  R
Sbjct: 111 RRGDMVEARR----LFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPER 159


>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Glycine max]
          Length = 711

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 279/741 (37%), Positives = 403/741 (54%), Gaps = 63/741 (8%)

Query: 74  IAAYANSGRLREAKKLFNETPF--KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRP 131
           IA YA +G+L  A+K+F+ETP   +   +W++++  Y       EA  LF +M      P
Sbjct: 29  IACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKM------P 82

Query: 132 SQYTLD-NVLRLCSLK-GLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
            + T+  N L    +K G+L    +       T  D N    T +V  Y +   + EAE 
Sbjct: 83  QRNTVSWNGLISGHIKNGMLSEARR----VFDTMPDRNVVSWTSMVRGYVRNGDVAEAER 138

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           LF   P  KN V+WT M+ G  Q G    A + F  M  + V +                
Sbjct: 139 LFWHMPH-KNVVSWTVMLGGLLQEGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDE 197

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
           AR         +     + NV   +A++  YA+ G +D AR+L E     NEVSW +M++
Sbjct: 198 AR--------ALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLL 249

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           G+   G  +EA SLF  M  + +                                     
Sbjct: 250 GYTHSGRMREASSLFDAMPVKPV------------------------------------- 272

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
              V N +I  +   G +D A  VF  M+++D  +W+++I      G   EAL  F  M+
Sbjct: 273 --VVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQ 330

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
             G+  +   + S+LS C  L  L+ G+QVHA  ++S     L V + L+ +Y KCG + 
Sbjct: 331 REGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLV 390

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
            A +VF+    +DV+ W ++I G +Q+G G+EAL  +  M + G  PD +TF+G+L ACS
Sbjct: 391 RAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACS 450

Query: 550 HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
           ++G  +     FE+M   Y ++PG +HYAC++DLLGR+ ++ EA  L+++M  EPDA VW
Sbjct: 451 YSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVW 510

Query: 610 KALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
            ALL ACR H  L+L E A   L +LEP NA PYV LSNMY+  G+W D   +R+ +K+R
Sbjct: 511 GALLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKAR 570

Query: 670 GIRKEPGCSWVETNSQVHIFISED-RGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHN 728
            + K PGCSW+E   +VH+F   D +GHP +  I   ++++  L++EAGY PD +F LH+
Sbjct: 571 SVTKLPGCSWIEVEKKVHMFTGGDSKGHPEQPIIMKMLEKLGGLLREAGYCPDGSFVLHD 630

Query: 729 VEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHII 788
           V+EE K   L YHSEKLAVA+GLL +P+G PIR+ KNLRVCGDCH+A+K I+ V  R II
Sbjct: 631 VDEEEKTHSLGYHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGREII 690

Query: 789 LRDSNRFHHFKAGNCSCGDYW 809
           LRD+NRFHHFK G+CSC DYW
Sbjct: 691 LRDANRFHHFKDGHCSCKDYW 711



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 152/495 (30%), Positives = 246/495 (49%), Gaps = 35/495 (7%)

Query: 34  KPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNET 93
           +  S  N  +  +  + +  EA  LFEKM  R+  +WN +I+ +  +G L EA+++F+  
Sbjct: 53  RTVSSWNAMVAAYFEARQPREALLLFEKMPQRNTVSWNGLISGHIKNGMLSEARRVFDTM 112

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE 153
           P +N  +W+S++ GY   G   EA  LFW M      P +  +   +    L GLLQ G 
Sbjct: 113 PDRNVVSWTSMVRGYVRNGDVAEAERLFWHM------PHKNVVSWTV---MLGGLLQEGR 163

Query: 154 QFHGYAIKTCFDL----NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
                  +  FD+    +   VT ++  Y +   + EA  LF   P  +N V WT M++G
Sbjct: 164 VDDA---RKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPK-RNVVTWTAMVSG 219

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEA- 268
           Y++NG    A + F  M     E N+ ++ ++L      S R   A       SS F+A 
Sbjct: 220 YARNGKVDVARKLFEVM----PERNEVSWTAMLLGYTH-SGRMREA-------SSLFDAM 267

Query: 269 ---NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
               V V + +I  +   G++D ARR+ +  +  +  +W++MI  + R+G+  EAL LF+
Sbjct: 268 PVKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFR 327

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           +M    + ++  +  SVL+   S   L++ K VH+ +V++ F+   +V + LI MY K G
Sbjct: 328 RMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCG 387

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
           NL  A  VFN    KDV+ W S+ITG + HG  EEAL  F DM  SG+ PD V    +LS
Sbjct: 388 NLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLS 447

Query: 446 ACAELTVLEFGQQV-HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DV 503
           AC+    ++ G ++   +  K      +     LV +  +   +N+A ++ + M    D 
Sbjct: 448 ACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDA 507

Query: 504 ITWTALIMGCAQNGK 518
           I W AL+  C  + K
Sbjct: 508 IVWGALLGACRTHMK 522



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 134/278 (48%), Gaps = 34/278 (12%)

Query: 33  VKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE 92
           VKP    N  ++ F  +GE+D+A ++F+ M +RD  TW+ MI  Y               
Sbjct: 269 VKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERK------------ 316

Query: 93  TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
                              G ++EA  LF +MQ EG   +  +L +VL +C     L  G
Sbjct: 317 -------------------GYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHG 357

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
           +Q H   +++ FD + +V + L+ MY KC  +  A+ +F  FP  K+ V W +MITGYSQ
Sbjct: 358 KQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPL-KDVVMWNSMITGYSQ 416

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVY 271
           +G G +A+  F DM   GV  +  TF  +L+AC+       G ++   +      E  + 
Sbjct: 417 HGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIE 476

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
             + L+D+  +   ++ A +L+E   ++ + + W +++
Sbjct: 477 HYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALL 514



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 150/349 (42%), Gaps = 73/349 (20%)

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEV--SWNSMIVGFARQGFHKEALSLFKKMHARD 331
           S  I  YA+ G LD AR++ + + + +    SWN+M+  +      +EAL LF+KM  R+
Sbjct: 26  SYAIACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQRN 85

Query: 332 IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
                                                      N LI  + K G L  A 
Sbjct: 86  T---------------------------------------VSWNGLISGHIKNGMLSEAR 106

Query: 392 MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSA----- 446
            VF+ M D++V+SWTS++ G   +G   EA + F  M    +    V++  +L       
Sbjct: 107 RVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGGLLQEGRVDD 166

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITW 506
             +L  +   + V AV    GG             Y + G +++A  +FD M  R+V+TW
Sbjct: 167 ARKLFDMMPEKDVVAVTNMIGG-------------YCEEGRLDEARALFDEMPKRNVVTW 213

Query: 507 TALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDK 566
           TA++ G A+NGK   A + ++ M  R    + +++  +L   +H+G    A   F++M  
Sbjct: 214 TAMVSGYARNGKVDVARKLFEVMPER----NEVSWTAMLLGYTHSGRMREASSLFDAMP- 268

Query: 567 VYGIKPGPDHYAC--MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
              +KP      C  MI   G +G++ +A+ +   M  E D   W A++
Sbjct: 269 ---VKPV---VVCNEMIMGFGLNGEVDKARRVFKGM-KERDNGTWSAMI 310


>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
 gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
          Length = 571

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 250/574 (43%), Positives = 346/574 (60%), Gaps = 9/574 (1%)

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSA----LIDMYAKCGDLDSARRLLEY 295
           SIL ACA       G  VHG    SG +A V+ ++     L+DMYAKCG LD A  + + 
Sbjct: 3   SILQACANCGDVSLGRAVHG----SGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDL 58

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
             +   V+W S+I  +AR+G   EA+ LF +M    +  D FT  +VL+  A N  L N 
Sbjct: 59  MSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENG 118

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           K VH+ I +   +   FV NAL+DMYAK G+++ A  VF  M  KD+ISW ++I G + +
Sbjct: 119 KDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKN 178

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
               EAL  F DM +  + PD   ++ IL ACA L  L+ G++VH   L++G  S   V 
Sbjct: 179 SLPNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVA 237

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           N+LV +Y KCG    A  +FD + T+D+ITWT +I G   +G G  A+  +++M   G +
Sbjct: 238 NALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIE 297

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           PD ++F+ +L+ACSH+GL +    +F  M     +KP  +HYAC++DLL RSGKL  A  
Sbjct: 298 PDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYK 357

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
            +  M  EPDAT+W ALLS CR+H D++L E+ A ++FELEP N   YV L+N Y+ A K
Sbjct: 358 FIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEK 417

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
           WE+  ++R+ +  RG++K PGCSW+E  S+VHIF++ +  HP    I   +  +   +KE
Sbjct: 418 WEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKE 477

Query: 716 AGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
            GY P   +AL N +   KE  L  HSEKLA+AFG+L LP    IR+ KNLRVCGDCH  
Sbjct: 478 EGYFPKTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHEM 537

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            K+IS    R I+LRDSNRFHHFK G C C  +W
Sbjct: 538 AKFISKTLGREIVLRDSNRFHHFKDGVCCCRGFW 571



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/378 (33%), Positives = 197/378 (52%), Gaps = 4/378 (1%)

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           ++L+ C+  G +  G   HG  +K C          L+DMYAKC  +  A  +F +    
Sbjct: 3   SILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLM-SV 61

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           +  V WT++I  Y++ G   +AI  F +M  EGV  + FT  ++L ACA   + + G  V
Sbjct: 62  RTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDV 121

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           H  I  +  ++N++V +AL+DMYAKCG ++ A  +     + + +SWN+MI G+++    
Sbjct: 122 HNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLP 181

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
            EALSLF  M   ++K D  T   +L   AS   L+  K VH  I++ GF   + V NAL
Sbjct: 182 NEALSLFGDM-VLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANAL 240

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           +DMY K G    A ++F+++  KD+I+WT +I G   HG    A+  F++MR +GI PD 
Sbjct: 241 VDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDE 300

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAKCGCINDANRVFD 496
           V   SIL AC+   +L+ G +   V          L     +V + A+ G +  A +   
Sbjct: 301 VSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIK 360

Query: 497 SMHTR-DVITWTALIMGC 513
           SM    D   W AL+ GC
Sbjct: 361 SMPIEPDATIWGALLSGC 378



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 119/359 (33%), Positives = 186/359 (51%), Gaps = 12/359 (3%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           NT++  YA  G L  A  +F+    +   TW+SLI  Y+  GL  EA  LF +M  EG  
Sbjct: 37  NTLLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVS 96

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  +T+  VL  C+  G L+ G+  H Y  +     N FV   L+DMYAKC  + +A  +
Sbjct: 97  PDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSV 156

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P  K+ ++W TMI GYS+N    +A+  F DM +E ++ +  T   IL ACA++++
Sbjct: 157 FLEMPV-KDIISWNTMIGGYSKNSLPNEALSLFGDMVLE-MKPDGTTLACILPACASLAS 214

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            D G +VHG IL +GF ++  V +AL+DMY KCG    AR L +     + ++W  MI G
Sbjct: 215 LDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAG 274

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI-----VKT 365
           +   GF   A++ F +M    I+ D+ ++ S+L   + +  L+      +++     VK 
Sbjct: 275 YGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKP 334

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALK 423
             E Y      ++D+ A+ G L  A+     M  + D   W +L++GC  H   + A K
Sbjct: 335 KLEHYA----CIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEK 389



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 128/248 (51%), Gaps = 10/248 (4%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N ++  YA  G + +A  +F E P K+  +W+++I GYS   L  EA  LF  M LE
Sbjct: 135 FVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLE 194

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
             +P   TL  +L  C+    L RG++ HG+ ++  F  +  V   LVDMY KC     A
Sbjct: 195 -MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLA 253

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             LF M P  K+ + WT MI GY  +G+G  AI  F +MR  G+E ++ +F SIL AC+ 
Sbjct: 254 RLLFDMIPT-KDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSH 312

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQ----SALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
               D G +    +     E NV  +    + ++D+ A+ G L  A + ++   I+ + +
Sbjct: 313 SGLLDEGWRFFNVMQD---ECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDAT 369

Query: 304 -WNSMIVG 310
            W +++ G
Sbjct: 370 IWGALLSG 377


>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 703

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 250/677 (36%), Positives = 399/677 (58%), Gaps = 6/677 (0%)

Query: 138 NVLRLCSLKGLLQRGEQFHGYAI---KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
           N+L+  +    L+ G+  H   +   +T  D +   +  L+++Y+KC     A  LF   
Sbjct: 28  NLLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRM 87

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILTACAAVSARDF 253
              +N V+W+ ++ GY   G   + +  FR++  ++    N++ F  +L+ CA       
Sbjct: 88  LQ-RNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKE 146

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           G Q HG +L SG   + YV++ALI MY++C  +DSA ++L+    D+  S+NS++     
Sbjct: 147 GKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVE 206

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
            G   EA  + K+M    +  D  TY SVL   A   DL     +H+ ++KTG     FV
Sbjct: 207 SGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFV 266

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
           ++ LID Y K G +  A   F+ ++D++V++WT+++T    +G +EE L  F+ M +   
Sbjct: 267 SSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDT 326

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
            P+    + +L+ACA L  L +G  +H   + SG  + L V N+L+ +Y+K G I+ +  
Sbjct: 327 RPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYN 386

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGL 553
           VF +M  RDVITW A+I G + +G GK+AL  +  M++ G  P+Y+TF+G+L AC H  L
Sbjct: 387 VFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLAL 446

Query: 554 AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG-EPDATVWKAL 612
            +   +YF+ + K + ++PG +HY CM+ LLGR+G L EA+  +      + D   W+ L
Sbjct: 447 VQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTL 506

Query: 613 LSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIR 672
           L+AC +H +  LG++    + +++P +   Y  LSNM++ A KW+   ++RKLMK R I+
Sbjct: 507 LNACHIHRNYNLGKQITETVIQMDPHDVGTYTLLSNMHAKARKWDGVVKIRKLMKERNIK 566

Query: 673 KEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEE 732
           KEPG SW++  +  H+F+SE   HP  T I+ K+ +++ +IK  GY PD+   LH+VE+E
Sbjct: 567 KEPGASWLDIRNNTHVFVSEGSNHPESTQIFEKVQQLLAMIKPLGYAPDVGVVLHDVEDE 626

Query: 733 GKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDS 792
            KE  L++HSEKLA+A+GL+ +P   PIRI KNLR+C DCH A+K IS    R II+RD+
Sbjct: 627 QKEGYLSHHSEKLALAYGLMKIPPPGPIRIIKNLRMCDDCHIAVKLISKATNRLIIVRDA 686

Query: 793 NRFHHFKAGNCSCGDYW 809
           NRFHHF+ G C+C D+W
Sbjct: 687 NRFHHFREGLCTCNDHW 703



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 140/457 (30%), Positives = 247/457 (54%), Gaps = 11/457 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D    N++I  Y+  G+ + A+KLF+    +N  +WS+L+ GY + G  +E   LF  
Sbjct: 58  DSDITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFRN 117

Query: 124 M-QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           +  L+   P++Y    VL  C+  G ++ G+Q HGY +K+   L+ +V   L+ MY++C 
Sbjct: 118 LVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCF 177

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            +  A  +    P G +  ++ ++++   ++G   +A +  + M  E V  +  T+ S+L
Sbjct: 178 HVDSAMQILDTVP-GDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVL 236

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
             CA +     G Q+H  +L +G   +V+V S LID Y KCG++ +AR+  +     N V
Sbjct: 237 GLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVV 296

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           +W +++  + + G  +E L+LF KM   D + ++FT+  +LN  AS + L     +H  I
Sbjct: 297 AWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRI 356

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           V +GF+ +  V NALI+MY+K GN+D ++ VF+ M ++DVI+W ++I G ++HG  ++AL
Sbjct: 357 VMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQAL 416

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFG----QQVHAVFLKSGGCSSLSVDNSL 478
             F DM  +G CP++V    +LSAC  L +++ G     Q+   F    G    +    +
Sbjct: 417 LVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYT---CM 473

Query: 479 VLVYAKCGCINDANRVFDSMHTR--DVITWTALIMGC 513
           V +  + G +++A     +      DV+ W  L+  C
Sbjct: 474 VALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNAC 510



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 187/390 (47%), Gaps = 30/390 (7%)

Query: 47  SNSGEIDEAGQ----LFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWS 102
           ++SG + E  Q    L +       +  N +I  Y+    +  A ++ +  P  + F+++
Sbjct: 139 ADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYN 198

Query: 103 SLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT 162
           S++      G   EA ++  +M  E       T  +VL LC+    LQ G Q H   +KT
Sbjct: 199 SILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKT 258

Query: 163 CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIEC 222
               + FV + L+D Y KC  +  A   F    D +N VAWT ++T Y QNG+  + +  
Sbjct: 259 GLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRD-RNVVAWTAVLTAYLQNGHFEETLNL 317

Query: 223 FRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK 282
           F  M +E    N+FTF  +L ACA++ A  +G  +HG I+ SGF+ ++ V +ALI+MY+K
Sbjct: 318 FTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSK 377

Query: 283 CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
            G++DS+  +       + ++WN+MI G++  G  K+AL +F+ M +     +  T+  V
Sbjct: 378 SGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGV 437

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN------------NALIDMYAKQGNLDCA 390
           L           +  VH  +V+ GF  +  +               ++ +  + G LD A
Sbjct: 438 L-----------SACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEA 486

Query: 391 --FMVFNLMQDKDVISWTSLITGCAYHGSY 418
             FM        DV++W +L+  C  H +Y
Sbjct: 487 ENFMKTTTQVKWDVVAWRTLLNACHIHRNY 516



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 70/172 (40%), Gaps = 36/172 (20%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           AL++ +S SG ID +  +F  M +RD  TWN MI                          
Sbjct: 370 ALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMIC------------------------- 404

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
                 GYS++GL  +A  +F  M   G  P+  T   VL  C    L+Q G  +    +
Sbjct: 405 ------GYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIM 458

Query: 161 KTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGK-NHVAWTTMITG 209
           K  FD+   +   T +V +  +   + EAE   K     K + VAW T++  
Sbjct: 459 KK-FDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNA 509


>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
          Length = 825

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 254/665 (38%), Positives = 394/665 (59%), Gaps = 3/665 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D+D +   ++I  Y+ +G + EA+ +F++   K   TW+++I GY+  G    + ELF Q
Sbjct: 161 DQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQ 220

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+     P +Y + +VL  CS+   L+ G+Q H Y ++   +++  VV  L+D Y KC  
Sbjct: 221 MRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNR 280

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +     LF      KN ++WTTMI+GY QN + ++A++ F +M   G + + F   S+LT
Sbjct: 281 VKAGRKLFDQMV-VKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLT 339

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           +C +  A + G QVH   + +  E++ +V++ LIDMYAK   L  A+++ +     N +S
Sbjct: 340 SCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVIS 399

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           +N+MI G++ Q    EAL LF +M  R       T+ S+L   AS   L  +K +H LI+
Sbjct: 400 YNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLII 459

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K G     F  +ALID+Y+K   +  A  VF  M +KD++ W ++  G   H   EEALK
Sbjct: 460 KFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALK 519

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            +S ++ S   P+    +++++A + L  L  GQQ H   +K G      V N+LV +YA
Sbjct: 520 LYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYA 579

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG I +A ++F+S   RDV+ W ++I   AQ+G+ +EAL  + +M+  G +P+Y+TFV 
Sbjct: 580 KCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVA 639

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           +L ACSHAG  E+   +F SM   +GIKPG +HYAC++ LLGRSGKL EAK  +++M  E
Sbjct: 640 VLSACSHAGRVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIE 698

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
           P A VW++LLSACR+ G++ELG+ AA      +P ++  Y+ LSN++++ G W D  +VR
Sbjct: 699 PAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVR 758

Query: 664 KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMN 723
             M S  + KEPG SW+E N++V++FI+ D  H    DI S +D ++  IK AGYVPD  
Sbjct: 759 DRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHR-EADIGSVLDILIQHIKGAGYVPDAT 817

Query: 724 FALHN 728
             L N
Sbjct: 818 ALLMN 822



 Score =  338 bits (868), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 195/624 (31%), Positives = 327/624 (52%), Gaps = 9/624 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           GQ+       D F  N +I   + S R+  A+ +F++ P KN  TWSS++  YS  G   
Sbjct: 51  GQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSE 110

Query: 116 EAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
           EA  +F  +Q + G  P+++ L +V+R C+  G++++G Q HG+ +++ FD + +V T L
Sbjct: 111 EALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSL 170

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           +D Y+K   I EA  +F    + K  V WTT+I GY++ G    ++E F  MR   V  +
Sbjct: 171 IDFYSKNGNIEEARLVFDQLSE-KTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPD 229

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
           ++   S+L+AC+ +   + G Q+H  +L  G E +V V + LID Y KC  + + R+L +
Sbjct: 230 RYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFD 289

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
              + N +SW +MI G+ +  F  EA+ LF +M+    K D F   SVL    S   L  
Sbjct: 290 QMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQ 349

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
            + VH+  +K   E  +FV N LIDMYAK   L  A  VF++M +++VIS+ ++I G + 
Sbjct: 350 GRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSS 409

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
                EAL+ F +MR+    P  +   S+L   A L  LE  +Q+H + +K G    L  
Sbjct: 410 QEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFA 469

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
            ++L+ VY+KC  + DA  VF+ M+ +D++ W A+  G  Q+ + +EAL+ Y  +     
Sbjct: 470 GSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQ 529

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAK 594
           KP+  TF  L+ A S+     + + +   + K+ G+   P     ++D+  + G + EA+
Sbjct: 530 KPNEFTFAALITAASNLASLRHGQQFHNQLVKM-GLDFCPFVTNALVDMYAKCGSIEEAR 588

Query: 595 ALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFE--LEPMNAMPYVQLSNMYST 652
            + +  +   D   W +++S    HG+ E        + +  ++P N + +V + +  S 
Sbjct: 589 KMFNSSIWR-DVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQP-NYVTFVAVLSACSH 646

Query: 653 AGKWEDAARVRKLMKSRGIRKEPG 676
           AG+ ED       M   GI+  PG
Sbjct: 647 AGRVEDGLNHFNSMPGFGIK--PG 668



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 148/491 (30%), Positives = 255/491 (51%), Gaps = 4/491 (0%)

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           +Q+   RP +    N+L+L   +  +   +  HG  I +    + F+   L+++ +K   
Sbjct: 18  LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDR 77

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSIL 242
           +  A  +F   P  KN + W++M++ YSQ GY  +A+  F D+ R  G   N+F   S++
Sbjct: 78  VDNARVVFDKMPH-KNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVI 136

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
            AC  +   + GAQ+HG ++ SGF+ +VYV ++LID Y+K G+++ AR + +       V
Sbjct: 137 RACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAV 196

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           +W ++I G+ + G    +L LF +M   ++  D +   SVL+  +    L   K +H+ +
Sbjct: 197 TWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYV 256

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           ++ G E    V N LID Y K   +     +F+ M  K++ISWT++I+G   +    EA+
Sbjct: 257 LRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAM 316

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
           K F +M   G  PD    +S+L++C     LE G+QVHA  +K+   S   V N L+ +Y
Sbjct: 317 KLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMY 376

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
           AK   + DA +VFD M  ++VI++ A+I G +   K  EAL+ + +M  R   P  +TFV
Sbjct: 377 AKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFV 436

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
            LL   S +  A         +   +G+       + +ID+  +   + +A+ + ++M  
Sbjct: 437 SLL-GVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEM-N 494

Query: 603 EPDATVWKALL 613
           E D  VW A+ 
Sbjct: 495 EKDIVVWNAMF 505



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 122/271 (45%), Gaps = 38/271 (14%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           AL+D +S    + +A  +FE+M+++D   WN M   Y       EA KL++         
Sbjct: 472 ALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYS--------- 522

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
                                  +Q    +P+++T   ++   S    L+ G+QFH   +
Sbjct: 523 ----------------------TLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLV 560

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG--KNHVAWTTMITGYSQNGYGFK 218
           K   D   FV   LVDMYAKC  I EA    KMF     ++ V W +MI+ ++Q+G   +
Sbjct: 561 KMGLDFCPFVTNALVDMYAKCGSIEEAR---KMFNSSIWRDVVCWNSMISTHAQHGEAEE 617

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID 278
           A+  FR+M  EG++ N  TF ++L+AC+     + G      +   G +      + ++ 
Sbjct: 618 ALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGTEHYACVVS 677

Query: 279 MYAKCGDLDSARRLLEYSEIDN-EVSWNSMI 308
           +  + G L  A+  +E   I+   + W S++
Sbjct: 678 LLGRSGKLFEAKEFIEKMPIEPAAIVWRSLL 708


>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Vitis vinifera]
          Length = 729

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 280/723 (38%), Positives = 407/723 (56%), Gaps = 51/723 (7%)

Query: 89  LFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL 148
           LFN T   N F ++S++  YS+     +   ++ QMQ  G RP  +    +++     G+
Sbjct: 56  LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTGGI 115

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVA-WTTMI 207
                 FH + +K     +AFV   ++DMYA+   I  A  +F   PD +  VA W  M+
Sbjct: 116 -----GFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMV 170

Query: 208 TGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFE 267
           +GY                + E     Q+ F  +                         E
Sbjct: 171 SGY---------------WKWESEGQAQWLFDVMP------------------------E 191

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM 327
            NV   +A++  YAK  DL++ARR  +     + VSWN+M+ G+A+ G  +EAL LF +M
Sbjct: 192 RNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEM 251

Query: 328 HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL 387
               I+ D+ T+ +V++  +S  D   A S+   + +   +   FV  AL+DMYAK G+L
Sbjct: 252 VNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDL 311

Query: 388 DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG-ICPDHVVVSSILSA 446
           D A  +FN M  ++V++W S+I G A +G    A++ F +M  +  + PD V + S++SA
Sbjct: 312 DSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISA 371

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITW 506
           C  L  LE G  V     ++    S+S  N+++ +Y++CG + DA RVF  M TRDV+++
Sbjct: 372 CGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSY 431

Query: 507 TALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDK 566
             LI G A +G G EA+     M   G +PD +TF+G+L ACSHAGL E  R  FES+  
Sbjct: 432 NTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD 491

Query: 567 VYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGE 626
                P  DHYACM+DLLGR G+L +AK  +++M  EP A V+ +LL+A R+H  +ELGE
Sbjct: 492 -----PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGE 546

Query: 627 RAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQV 686
            AAN LFELEP N+  ++ LSN+Y++AG+W+D  R+R+ MK  G++K  G SWVE   ++
Sbjct: 547 LAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKL 606

Query: 687 HIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLA 746
           H FI  DR H    DIY  + E+   ++EAGY+ D +  L +VEEE KE  +  HSEKLA
Sbjct: 607 HKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLA 666

Query: 747 VAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCG 806
           + + LL    GA IR+ KNLRVC DCHTA+K IS +  R II+RD+NRFH F  G CSC 
Sbjct: 667 ICYALLVSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCK 726

Query: 807 DYW 809
           DYW
Sbjct: 727 DYW 729



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 182/376 (48%), Gaps = 10/376 (2%)

Query: 20  IGPARYTHNVGNSV----KPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIA 75
           +GP  +   V + +    +  +D N  +  +       +A  LF+ M +R+  TW  M+ 
Sbjct: 143 LGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVT 202

Query: 76  AYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYT 135
            YA    L  A++ F+  P ++  +W++++ GY+  GL  EA  LF +M   G  P + T
Sbjct: 203 GYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETT 262

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
              V+  CS +G             +    LN FV T L+DMYAK   +  A  LF   P
Sbjct: 263 WVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMP 322

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILTACAAVSARDFG 254
            G+N V W +MI GY+QNG    AIE F++M   + +  ++ T  S+++AC  + A + G
Sbjct: 323 -GRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELG 381

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
             V   +  +  + ++   +A+I MY++CG ++ A+R+ +     + VS+N++I GFA  
Sbjct: 382 NWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAH 441

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
           G   EA++L   M    I+ D  T+  VL   +    L   + V   I     + Y    
Sbjct: 442 GHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKDPAIDHYA--- 498

Query: 375 NALIDMYAKQGNLDCA 390
             ++D+  + G L+ A
Sbjct: 499 -CMVDLLGRVGELEDA 513



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 80/337 (23%), Positives = 146/337 (43%), Gaps = 22/337 (6%)

Query: 343 LNCFASNI-DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK-QGNLDCAFMVFNLMQDK 400
           L   AS + + N+ + +H+ I+      + +    LI+   + +       ++FN   + 
Sbjct: 4   LGSIASRVGNFNHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNP 63

Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
           +V  +TS++   ++   + + +  +  M+  G+ PD  V   ++ +         G   H
Sbjct: 64  NVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAG-----TGGIGFH 118

Query: 461 AVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM--HTRDVITWTALIMGCAQNGK 518
           A  LK G  S   V N+++ +YA+ G I  A +VFD +  + R V  W A++ G  +   
Sbjct: 119 AHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWES 178

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA 578
             +A   +D M  R    + IT+  ++   +     E AR YF+ M +   +      + 
Sbjct: 179 EGQAQWLFDVMPER----NVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVS-----WN 229

Query: 579 CMIDLLGRSGKLIEAKALLDQMVG---EPDATVWKALLSACRVHGDLELGERAANNLFEL 635
            M+    ++G   EA  L D+MV    EPD T W  ++SAC   GD  L       L + 
Sbjct: 230 AMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQK 289

Query: 636 E-PMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
              +N      L +MY+  G  + A ++   M  R +
Sbjct: 290 RIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNV 326


>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Brachypodium distachyon]
          Length = 747

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 265/715 (37%), Positives = 403/715 (56%), Gaps = 11/715 (1%)

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLEGY--RPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           ++LI  +S   L   AF L   +    Y  RP  +T  +++R            Q H  A
Sbjct: 37  NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNA---SAAQLHACA 93

Query: 160 IKTCFDLNAFVVTG-LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFK 218
           ++      +   +G LV  Y +   I EA  +F    + ++  AW  M++G  +N    +
Sbjct: 94  LRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSE-RDVPAWNAMLSGLCRNARAAE 152

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID 278
           A+  F  M  EGV  +  T  S+L  C  +  +     +H   +  G +  ++V +ALID
Sbjct: 153 AVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALID 212

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
           +Y K G L+ A+ +    E  + V+WNS+I G  ++G    AL +F+ M    +  D  T
Sbjct: 213 VYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLT 272

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV-NNALIDMYAKQGNLDCAFMVFNLM 397
             S+ +  A   D  +AKS+H  +++ G++    +  NA++DMYAK  N++ A  +F+ M
Sbjct: 273 LVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSM 332

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDM-RISGICPDHVVVSSILSACAELTVLEFG 456
             +D +SW +LITG   +G   EA++ +  M +  G+        S+L A + L  L+ G
Sbjct: 333 PVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQG 392

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
            ++HA+ +K G    + V   L+ +YAKCG + +A  +F+ M  R    W A+I G   +
Sbjct: 393 MRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVH 452

Query: 517 GKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH 576
           G G EAL  + +M   G KPD++TFV LL ACSHAGL +  R +F+ M   Y I P   H
Sbjct: 453 GHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKH 512

Query: 577 YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELE 636
           YACM D+LGR+G+L EA   +  M  +PD+ VW ALL ACR+HG++E+G+ A+ NLFEL+
Sbjct: 513 YACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELD 572

Query: 637 PMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFIS--EDR 694
           P N   YV +SNMY+  GKW+    VR L++ + ++K PG S +E    V++F S  +  
Sbjct: 573 PENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTE 632

Query: 695 GHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTL 754
            HP   +I +++  ++  I+  GYV D +F L +VE++ KE  L  HSE+LA+AFG++  
Sbjct: 633 PHPQHEEIQAELRSLLAKIRSVGYVSDYSFVLQDVEDDEKEHILNNHSERLAIAFGIINT 692

Query: 755 PQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           P   P+ I+KNLRVCGDCH A KYIS +  R II+RDSNRFHHFK G+CSCGD+W
Sbjct: 693 PSRTPLHIYKNLRVCGDCHNATKYISQITEREIIVRDSNRFHHFKDGHCSCGDFW 747



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 134/464 (28%), Positives = 231/464 (49%), Gaps = 8/464 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           FT  +++ AY   GR+ EA K+F+E   ++   W++++ G        EA  LF +M  E
Sbjct: 104 FTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGE 163

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G      T+ +VL +C L G        H YA+K   D   FV   L+D+Y K   + EA
Sbjct: 164 GVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEA 223

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
           + +F    + ++ V W ++I+G  Q G    A++ F+ MR  GV  +  T  S+ +A A 
Sbjct: 224 QCVFHGM-ECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQ 282

Query: 248 VSARDFGAQVHGCILSSGFEA-NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
                    +H  ++  G++  ++   +A++DMYAK  ++++A+R+ +   + + VSWN+
Sbjct: 283 GGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNT 342

Query: 307 MIVGFARQGFHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +I G+ + G   EA+  +  M   + +K    T+ SVL  ++    L     +H+L +K 
Sbjct: 343 LITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKI 402

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G     +V   LID+YAK G L  A ++F  M  +    W ++I+G   HG   EAL  F
Sbjct: 403 GLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLF 462

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LVLVYAK 484
           S M+  GI PDHV   S+L+AC+   +++ G+    V   +     ++   + +  +  +
Sbjct: 463 SRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGR 522

Query: 485 CGCINDANRVFDSMHTR-DVITWTALIMGCAQNGK---GKEALQ 524
            G +++A     +M  + D   W AL+  C  +G    GK A Q
Sbjct: 523 AGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQ 566



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 3/144 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +    +I  YA  G+L EA  LF + P ++   W+++I G   +G   EA  LF +MQ
Sbjct: 407 DVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQ 466

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV--VTGLVDMYAKCKC 183
            EG +P   T  ++L  CS  GL+ +G  F    ++  +D+         + DM  +   
Sbjct: 467 QEGIKPDHVTFVSLLAACSHAGLVDQGRSFFD-VMQVTYDIVPIAKHYACMADMLGRAGQ 525

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMI 207
           + EA    +  P   +   W  ++
Sbjct: 526 LDEAFNFIQNMPIKPDSAVWGALL 549


>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 780

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 264/720 (36%), Positives = 391/720 (54%), Gaps = 37/720 (5%)

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYA--KCKC 183
           ++G + ++    N+L          + +Q H + ++T    + +  + L+  YA   C C
Sbjct: 62  VKGEKGNEVESTNILEFIDQCTNTMQLKQIHAHMLRTSRFCDPYTASKLLTAYAISSCSC 121

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE-SNQFTFPSIL 242
           +  A+ +F   P   N   W T+I GY+ +    ++   F  M     E  N+FTFP + 
Sbjct: 122 LIYAKNVFNQIPQ-PNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLF 180

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
            A + +     G+ +HG ++ +   +++++ ++LI+ Y   G  D A R+       + V
Sbjct: 181 KAASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVV 240

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SWN+MI  FA  G   +AL LF++M  +D+K +  T  SVL+  A  IDL   + + S I
Sbjct: 241 SWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYI 300

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA- 421
              GF  +  +NNA++DMY K G ++ A  +FN M +KD++SWT+++ G A  G+Y+EA 
Sbjct: 301 ENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAH 360

Query: 422 ------------------------------LKYFSDMRISGIC-PDHVVVSSILSACAEL 450
                                         L  F +M++S    PD V +   L A A+L
Sbjct: 361 CIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQL 420

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
             ++FG  +H    K     +  +  SL+ +YAKCG +N A  VF ++  +DV  W+A+I
Sbjct: 421 GAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMI 480

Query: 511 MGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGI 570
              A  G+GK AL  +  ML    KP+ +TF  +L AC+HAGL       FE M+ +YGI
Sbjct: 481 GALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGI 540

Query: 571 KPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAAN 630
            P   HY C++D+ GR+G L +A + +++M   P A VW ALL AC  HG++EL E A  
Sbjct: 541 VPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQ 600

Query: 631 NLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFI 690
           NL ELEP N   +V LSN+Y+ AG WE  + +RKLM+   ++KEP CS ++ N  VH F+
Sbjct: 601 NLLELEPCNHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFL 660

Query: 691 SEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEG-KEIGLAYHSEKLAVAF 749
             D  HP    IYSK+DEI    K  GY PDM+  L   EE+   E  L  HSEKLA+AF
Sbjct: 661 VGDNSHPFSQKIYSKLDEISEKFKPIGYKPDMSNLLQLSEEDNLMEQSLNVHSEKLAIAF 720

Query: 750 GLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           GL++     PIRI KN+R+CGDCH   K +S +Y R I+LRD  RFHHF+ G CSC DYW
Sbjct: 721 GLISTASSQPIRIVKNIRICGDCHAFAKLVSQLYDRDILLRDRYRFHHFRGGKCSCLDYW 780



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 138/502 (27%), Positives = 234/502 (46%), Gaps = 38/502 (7%)

Query: 66  DGFTWNTMIAAYANSGR--LREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D +T + ++ AYA S    L  AK +FN+ P  N + W++LI GY++     ++F +F  
Sbjct: 103 DPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLH 162

Query: 124 MQLEGYR-PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           M       P+++T   + +  S   +L  G   HG  IK     + F++  L++ Y    
Sbjct: 163 MLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSG 222

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
               A  +F   P GK+ V+W  MI  ++  G   KA+  F++M ++ V+ N  T  S+L
Sbjct: 223 APDLAHRVFTNMP-GKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVL 281

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           +ACA     +FG  +   I ++GF  ++ + +A++DMY KCG ++ A+ L       + V
Sbjct: 282 SACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIV 341

Query: 303 SWNSMIVGFARQGFHKE-------------------------------ALSLFKKMH-AR 330
           SW +M+ G A+ G + E                               ALSLF +M  ++
Sbjct: 342 SWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSK 401

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
           D K D+ T    L   A    ++    +H  I K        +  +L+DMYAK GNL+ A
Sbjct: 402 DAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKA 461

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
             VF+ ++ KDV  W+++I   A +G  + AL  FS M  + I P+ V  ++IL AC   
Sbjct: 462 MEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHA 521

Query: 451 TVLEFGQQVHAVFLK-SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDV-ITWTA 508
            ++  G+Q+        G    +     +V ++ + G +  A    + M        W A
Sbjct: 522 GLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGA 581

Query: 509 LIMGCAQNGKGKEALQFYDQML 530
           L+  C+++G  + A   Y  +L
Sbjct: 582 LLGACSRHGNVELAELAYQNLL 603



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 187/407 (45%), Gaps = 49/407 (12%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G + +     D F  N++I  Y +SG    A ++F   P K+  +W+++I  ++  GL  
Sbjct: 197 GMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPD 256

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           +A  LF +M+++  +P+  T+ +VL  C+ K  L+ G     Y     F  +  +   ++
Sbjct: 257 KALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAML 316

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG-------------------------- 209
           DMY KC CI +A+ LF    + K+ V+WTTM+ G                          
Sbjct: 317 DMYVKCGCINDAKDLFNKMSE-KDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWN 375

Query: 210 -----YSQNGYGFKAIECFRDMRV-EGVESNQFTFPSILTACAAVSARDFGAQVHGCILS 263
                Y QNG    A+  F +M++ +  + ++ T    L A A + A DFG  +H  I  
Sbjct: 376 ALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKK 435

Query: 264 SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSL 323
                N ++ ++L+DMYAKCG+L+ A  +    E  +   W++MI   A  G  K AL L
Sbjct: 436 HDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDL 495

Query: 324 FKKMHARDIKIDDFTYPSVLNCFASNIDLNNA--------KSVHSLIVKTGFEGYKFVNN 375
           F  M    IK +  T+ ++L C  ++  L N         + ++ ++ +   + Y  V  
Sbjct: 496 FSSMLEAYIKPNAVTFTNIL-CACNHAGLVNEGEQLFEQMEPLYGIVPQ--IQHYVCV-- 550

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEA 421
             +D++ + G L+ A      M      + W +L+  C+ HG+ E A
Sbjct: 551 --VDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELA 595



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/281 (29%), Positives = 134/281 (47%), Gaps = 5/281 (1%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           LN A++D +   G I++A  LF KMS++D  +W TM+  +A  G   EA  +F+  P K 
Sbjct: 311 LNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKW 370

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQL-EGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
              W++LI  Y   G    A  LF +MQL +  +P + TL   L   +  G +  G   H
Sbjct: 371 TAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIH 430

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
            Y  K   +LN  + T L+DMYAKC  + +A  +F    + K+   W+ MI   +  G G
Sbjct: 431 VYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAV-ERKDVYVWSAMIGALAMYGQG 489

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS-SGFEANVYVQSA 275
             A++ F  M    ++ N  TF +IL AC      + G Q+   +    G    +     
Sbjct: 490 KAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVC 549

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIVGFARQG 315
           ++D++ + G L+ A   +E   I    + W +++   +R G
Sbjct: 550 VVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHG 590


>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 253/688 (36%), Positives = 393/688 (57%), Gaps = 14/688 (2%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N MI  Y   G +++A+K+F+     N  +W+S+I GYS  G   +A  ++ QM   G  
Sbjct: 198 NHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQF 257

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P Q T  +V++ C + G +  G Q H + IK+ F  +      L+ MY     I  A  +
Sbjct: 258 PDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNV 317

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV-ESNQFTFPSILTACAAVS 249
           F   P  K+ ++W TMITGY Q GY  +A+  FRD+  +G  + N+F F S+ +AC+++ 
Sbjct: 318 FTRIPT-KDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLL 376

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE--VSWNSM 307
             ++G QVHG  +  G   NV+   +L DMYAK G L SA+  + + +I N   VSWN++
Sbjct: 377 ELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAK--MAFCQIKNPDIVSWNAI 434

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I  FA  G   EA+  F++M    +  D  TY S+L    S + LN  + +HS IVK GF
Sbjct: 435 IAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGF 494

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVF-NLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
           +    V N+L+ MY K  +L  A  VF ++ ++ +++SW ++++ C       E  + + 
Sbjct: 495 DKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYK 554

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
           +M  SG  PD + ++++L  CAELT L  G QVH   +KSG    +SV N L+ +YAKCG
Sbjct: 555 EMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCG 614

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
            +  A  VFDS    D+++W++LI+G AQ G G EAL  +  M   G +P+ +T++G L 
Sbjct: 615 SLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALS 674

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ACSH GL E     ++SM+  +GI P  +H++C++DLL R+G L EA+  + +   + D 
Sbjct: 675 ACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADI 734

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
           T WK LL+AC+ H ++++ ER A N+ +L+P N+   V L N++++AG WE+ A++RKLM
Sbjct: 735 TAWKTLLAACKTHNNVDIAERGAGNILKLDPSNSAAMVMLCNIHASAGNWEEVAKLRKLM 794

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP------ 720
           K  G++K PG SW+E   + HIF SED  HP R  IY+ ++E+   + + GY P      
Sbjct: 795 KQMGVQKVPGQSWIEVKDKFHIFFSEDSSHPQRNLIYTMLEELWSQVLDDGYDPCQSCYI 854

Query: 721 -DMNFALHNVEEEGKEIGLAYHSEKLAV 747
            +M     N  E   +I L  H +K  +
Sbjct: 855 QNMYLKKKNYIEYDPKIVLMLHYKKFVM 882



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 170/572 (29%), Positives = 278/572 (48%), Gaps = 26/572 (4%)

Query: 110 NYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAF 169
           +Y   +EAF+   +     + PS YT  +++  C+    L   ++ H + +K+ +  +  
Sbjct: 138 HYKEALEAFDFHLKNSNSHFEPSTYT--SLVLACANFRSLDYAKKIHDHVLKSNYQPSII 195

Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
           +   +++MY KC  + +A  +F       N V+WT+MI+GYSQNG    AI  +  M   
Sbjct: 196 LQNHMINMYGKCGSMKDARKVFDTM-QLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRS 254

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
           G   +Q TF S++ AC      D G Q+H  ++ S F  ++  Q+ALI MY   G ++ A
Sbjct: 255 GQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHA 314

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI-KIDDFTYPSVLNCFAS 348
             +       + +SW +MI G+ + G+  EAL LF+ +  +   + ++F + SV +  +S
Sbjct: 315 SNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSS 374

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
            ++L   K VH + VK G     F   +L DMYAK G L  A M F  +++ D++SW ++
Sbjct: 375 LLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAI 434

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
           I   A +G   EA+ +F  M   G+ PD +   S+L  C     L  G+Q+H+  +K G 
Sbjct: 435 IAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGF 494

Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVF-DSMHTRDVITWTALIMGCAQNGKGKEALQFYD 527
              ++V NSL+ +Y KC  ++DA  VF D     ++++W A++  C Q  +  E  + Y 
Sbjct: 495 DKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYK 554

Query: 528 QMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPG--PDHYAC--MIDL 583
           +M   G KPD IT   LL  C     AE       +    Y IK G   D   C  +ID+
Sbjct: 555 EMHFSGNKPDSITITTLLGTC-----AELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDM 609

Query: 584 LGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL------EP 637
             + G L  A+ + D      D   W +L+     +    LG  A  NLF +      +P
Sbjct: 610 YAKCGSLKHARDVFDS-TQNLDIVSWSSLIVG---YAQCGLGHEAL-NLFRIMTNLGVQP 664

Query: 638 MNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
            N + Y+   +  S  G  E+  R+ K M++ 
Sbjct: 665 -NEVTYLGALSACSHIGLVEEGWRLYKSMETE 695



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 139/478 (29%), Positives = 221/478 (46%), Gaps = 36/478 (7%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  ++N G+I+ A  +F ++  +D  +W TMI                         
Sbjct: 299 NALISMYTNFGQIEHASNVFTRIPTKDLISWGTMIT------------------------ 334

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
                  GY   G  +EA  LF  +  +G Y+P+++   +V   CS    L+ G+Q HG 
Sbjct: 335 -------GYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGM 387

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFK 218
            +K     N F    L DMYAK   +  A+  F    +  + V+W  +I  ++ NG   +
Sbjct: 388 CVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKN-PDIVSWNAIIAAFADNGDANE 446

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID 278
           AI+ FR M   G+  +  T+ S+L  C +    + G Q+H  I+  GF+  + V ++L+ 
Sbjct: 447 AIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLT 506

Query: 279 MYAKCGDLDSARRLL-EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
           MY KC  L  A  +  + S   N VSWN+++    ++    E   L+K+MH    K D  
Sbjct: 507 MYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSI 566

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           T  ++L   A    L     VH   +K+G      V N LIDMYAK G+L  A  VF+  
Sbjct: 567 TITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDST 626

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
           Q+ D++SW+SLI G A  G   EAL  F  M   G+ P+ V     LSAC+ + ++E G 
Sbjct: 627 QNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGW 686

Query: 458 QVHAVFLKSGGCSSLSVDNSLVL-VYAKCGCINDANR-VFDSMHTRDVITWTALIMGC 513
           +++       G        S ++ + A+ GC+++A   +  S    D+  W  L+  C
Sbjct: 687 RLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAAC 744



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 176/360 (48%), Gaps = 4/360 (1%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           R+ F   ++   YA  G L  AK  F +    +  +W+++I  +++ G   EA + F QM
Sbjct: 395 RNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQM 454

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
              G  P   T  ++L  C     L +G Q H Y +K  FD    V   L+ MY KC  +
Sbjct: 455 IHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHL 514

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            +A  +F+      N V+W  +++   Q     +    +++M   G + +  T  ++L  
Sbjct: 515 HDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGT 574

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           CA +++   G QVH   + SG   +V V + LIDMYAKCG L  AR + + ++  + VSW
Sbjct: 575 CAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSW 634

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL--NNAKSVHSLI 362
           +S+IVG+A+ G   EAL+LF+ M    ++ ++ TY   L+   S+I L     +   S+ 
Sbjct: 635 SSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSA-CSHIGLVEEGWRLYKSME 693

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNL-DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
            + G    +   + ++D+ A+ G L +    +     D D+ +W +L+  C  H + + A
Sbjct: 694 TEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIA 753


>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 624

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 236/573 (41%), Positives = 362/573 (63%), Gaps = 1/573 (0%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
            + + +TACA     +   +VH  + SS F  + ++ ++LI +Y KCG +  AR++ +  
Sbjct: 53  VYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEM 112

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              + VSW S+I G+A+    +EA+ L   M     K + FT+ S+L    ++ D    +
Sbjct: 113 RRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGR 172

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H+L VK  +    +V +AL+DMYA+ G +D A  VF+ +  K+ +SW +LI+G A  G
Sbjct: 173 QIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKG 232

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
             E AL  F++M  +G    H   SS+ S+ A L  LE G+ VHA  +KS    +    N
Sbjct: 233 DGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGN 292

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           +L+ +YAK G + DA +VFD +  +D++TW  ++   AQ G GKEA+  +++M   G   
Sbjct: 293 TLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYL 352

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           + +TF+ +L ACSH GL +  + YFE M K Y ++P  DH+  ++ LLGR+G L  A   
Sbjct: 353 NQVTFLCILTACSHGGLVKEGKRYFEMM-KEYDLEPEIDHFVTVVALLGRAGLLNFALVF 411

Query: 597 LDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
           + +M  EP A VW ALL+ACR+H + ++G+ AA+++FEL+P ++ P V L N+Y++ G+W
Sbjct: 412 IFKMPIEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYASTGQW 471

Query: 657 EDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA 716
           + AARVR++MK+ G++KEP CSWVE  + VH+F++ D  HP   +IY    +I   I++ 
Sbjct: 472 DAAARVRRIMKTTGVKKEPACSWVEMENSVHMFVANDDTHPRAEEIYKMWGQISKKIRKE 531

Query: 717 GYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAM 776
           GYVPDM++ L  V+++ +E  L YHSEKLA+AF L+ +P GA IRI KN+R+CGDCH+A 
Sbjct: 532 GYVPDMDYVLLRVDDQEREANLQYHSEKLALAFALIEMPAGATIRIMKNIRICGDCHSAF 591

Query: 777 KYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           KYIS V+ R I++RD+NRFHHF  G+CSC DYW
Sbjct: 592 KYISKVFGREIVVRDTNRFHHFSNGSCSCADYW 624



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 120/391 (30%), Positives = 199/391 (50%), Gaps = 2/391 (0%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+       +  C+    L+   + H +   + F  +AF+   L+ +Y KC  + EA  +
Sbjct: 49  PTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKV 108

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F      K+ V+WT++I GY+QN    +AI     M     + N FTF S+L A  A + 
Sbjct: 109 FDEMRR-KDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHAD 167

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              G Q+H   +   +  +VYV SAL+DMYA+CG +D A  + +  +  N VSWN++I G
Sbjct: 168 SGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISG 227

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           FAR+G  + AL  F +M     +   FTY SV +  A    L   K VH+ ++K+  +  
Sbjct: 228 FARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMT 287

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
            F  N L+DMYAK G++  A  VF+ + DKD+++W +++T  A +G  +EA+ +F +MR 
Sbjct: 288 AFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRK 347

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
           SGI  + V    IL+AC+   +++ G++   +  +      +    ++V +  + G +N 
Sbjct: 348 SGIYLNQVTFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHFVTVVALLGRAGLLNF 407

Query: 491 ANR-VFDSMHTRDVITWTALIMGCAQNGKGK 520
           A   +F          W AL+  C  +   K
Sbjct: 408 ALVFIFKMPIEPTAAVWGALLAACRMHKNAK 438



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 198/416 (47%), Gaps = 27/416 (6%)

Query: 25  YTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKM---------------------S 63
           YT    N V  AS + R L D  ++GE+    +++                        S
Sbjct: 21  YTSTAANPVPAASAVLRDL-DLLDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLAS 79

Query: 64  DR---DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFEL 120
            R   D F  N++I  Y   G + EA+K+F+E   K+  +W+SLI GY+   +  EA  L
Sbjct: 80  SRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGL 139

Query: 121 FWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK 180
              M    ++P+ +T  ++L+          G Q H  A+K  +  + +V + L+DMYA+
Sbjct: 140 LPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYAR 199

Query: 181 CKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
           C  +  A  +F    D KN V+W  +I+G+++ G G  A+  F +M   G E+  FT+ S
Sbjct: 200 CGMMDMATAVFDKL-DSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSS 258

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           + ++ A + A + G  VH  ++ S  +   +  + L+DMYAK G +  AR++ +  +  +
Sbjct: 259 VFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKD 318

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
            V+WN+M+  FA+ G  KEA+S F++M    I ++  T+  +L   +    +   K    
Sbjct: 319 LVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFE 378

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM-VFNLMQDKDVISWTSLITGCAYH 415
           ++ +   E        ++ +  + G L+ A + +F +  +     W +L+  C  H
Sbjct: 379 MMKEYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMH 434



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 102/213 (47%), Gaps = 25/213 (11%)

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
           + P   V  + ++ACA+   LE  ++VHA    S       +DNSL+ +Y KCG + +A 
Sbjct: 47  LAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEAR 106

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC-SHA 551
           +VFD M  +D+++WT+LI G AQN   +EA+     ML    KP+  TF  LL A  +HA
Sbjct: 107 KVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHA 166

Query: 552 ---------GLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
                     LA    W+    + VY         + ++D+  R G +  A A+ D++  
Sbjct: 167 DSGIGRQIHALAVKCDWH----EDVYV-------GSALLDMYARCGMMDMATAVFDKL-D 214

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFEL 635
             +   W AL+S     GD   GE A     E+
Sbjct: 215 SKNGVSWNALISGFARKGD---GETALMTFAEM 244



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 14/217 (6%)

Query: 25  YTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRL 83
           + H + +  K  +     L+D ++ SG + +A ++F+++ D+D  TWNTM+ A+A  G  
Sbjct: 276 HAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLG 335

Query: 84  REAKKLFNETP----FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
           +EA   F E      + N  T+  ++   S+ GL  E    F  M+     P       V
Sbjct: 336 KEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHFVTV 395

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV---DMYAKCKC-IFEAEYLFKMFP 195
           + L    GLL     F     K   +  A V   L+    M+   K   F A+++F++ P
Sbjct: 396 VALLGRAGLLNFALVF---IFKMPIEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDP 452

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
           D          I  Y+  G    A    R M+  GV+
Sbjct: 453 DDSGPPVLLYNI--YASTGQWDAAARVRRIMKTTGVK 487


>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
 gi|194688780|gb|ACF78474.1| unknown [Zea mays]
 gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
          Length = 695

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 255/693 (36%), Positives = 397/693 (57%), Gaps = 17/693 (2%)

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
           Q  +  +LR  +    L+ G Q HG   K  F  +  +   L+DMY KC  +  A  +F 
Sbjct: 4   QKMIAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFG 63

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACAAVSAR 251
              D +N V+WT ++ G+ ++G     +    +MR       N++T  + L AC  V   
Sbjct: 64  GMRD-RNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDT 122

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV-SWNSMIVG 310
             G  +HG  + +G++ +  V S+L+ +Y+K G +  ARR+ + + + + + +WN+M+ G
Sbjct: 123 AAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSG 182

Query: 311 FARQGFHKEALSLFKKM--HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
           +A  G  ++AL +F++M  H    + D+FT+ S+L   +          VH+ +  +GF 
Sbjct: 183 YAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFS 242

Query: 369 --GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
                 +  AL+DMY K   L  A  VF  ++ K+VI WT+++ G A  G   EAL+ F 
Sbjct: 243 TASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFR 302

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
               SG  PD  V+SS++   A+  ++E G+QVH   +K    + +S  NS+V +Y KCG
Sbjct: 303 RFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCG 362

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
             ++A R+F  M   +V++WT ++ G  ++G G+EA+  +++M A G +PD +T++ LL 
Sbjct: 363 LPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLS 422

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ACSHAGL +  R YF  + +   ++P  +HYACM+DLLGR+G+L EA+ L+  M  EP  
Sbjct: 423 ACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTV 482

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
            VW+ LLSACRVH D+ +G  A + L  ++  N + YV LSN+ + AG+W +  +VR  M
Sbjct: 483 GVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDAM 542

Query: 667 KSRGIRKEPGCSWVETNSQVHIFI---SEDRGHPLRTDIYSKIDEIMLLIKEA-GY-VPD 721
           + RG++K+ GCSWVE   +VH F     E+  HP   DI   + ++   ++E  GY   D
Sbjct: 543 RRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRDMETRMREQLGYNADD 602

Query: 722 MNFALHNVEEEGKEIGLAYHSEKLAVAFGLLT-----LPQGAPIRIFKNLRVCGDCHTAM 776
             FALH+V+EE +   L  HSE+LAV   LL         G PIR++KNLRVCGDCH   
Sbjct: 603 ARFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGHGEPIRVYKNLRVCGDCHEFF 662

Query: 777 KYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           K +SAV  R +++RD+NRFH F+ G+CSC DYW
Sbjct: 663 KGLSAVVRRALVVRDANRFHRFEHGSCSCKDYW 695



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 138/489 (28%), Positives = 235/489 (48%), Gaps = 9/489 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D    N +I  Y   G L  A ++F     +N  +W++L+ G+  +G       L  +M+
Sbjct: 38  DTMLGNNLIDMYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMR 97

Query: 126 LEG-YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
                 P++YTL   L+ C + G    G   HG  ++  +  +  V + LV +Y+K   I
Sbjct: 98  TASEAAPNEYTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRI 157

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV-EGV-ESNQFTFPSIL 242
            +A  +F     G     W  M++GY+  G+G  A+  FR+MR  EG  + ++FTF S+L
Sbjct: 158 GDARRVFDGAGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLL 217

Query: 243 TACAAVSARDFGAQVHGCILSSGFE--ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
            AC+ + A   GAQVH  + +SGF   +N  +  AL+DMY KC  L  A ++ E  E  N
Sbjct: 218 KACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKN 277

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
            + W +++VG A++G   EAL LF++      + D     SV+   A    +   + VH 
Sbjct: 278 VIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHC 337

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
             +K          N+++DMY K G  D A  +F  M+  +V+SWT+++ G   HG   E
Sbjct: 338 YGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGRE 397

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LV 479
           A+  F +MR  G+ PD V   ++LSAC+   +++  ++  +   +       +   + +V
Sbjct: 398 AVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMV 457

Query: 480 LVYAKCGCINDANRVFDSMHTRDVI-TWTALIMGCAQNGKGKEALQFYDQMLAR-GTKP- 536
            +  + G + +A  +  +M     +  W  L+  C  +       +  D +LA  G  P 
Sbjct: 458 DLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPV 517

Query: 537 DYITFVGLL 545
           +Y+T   +L
Sbjct: 518 NYVTLSNVL 526


>gi|449510831|ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 556

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 250/584 (42%), Positives = 352/584 (60%), Gaps = 28/584 (4%)

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           MR  GV  N +TF ++L+AC   +A   G Q+H  +   GF A V+V SAL+DMYAKC D
Sbjct: 1   MRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCD 60

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           +  A ++                       F +    L + + A    +D+ ++ SV + 
Sbjct: 61  MLMAEKV-----------------------FEEMPTLLLENLTA----LDEVSFSSVFSA 93

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
            A+  +L   K VH + +K G     ++NN+L DMY K G  +    +F+    +DV++W
Sbjct: 94  CANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTW 153

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
             +I    Y+ +YE+A   F  MR  G  PD    SS+L +CA L  L  G  +H   ++
Sbjct: 154 NIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIR 213

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
           SG   +L V +SL+ +YAKCG + DA ++F+    R+V+ WTA+I  C Q+G     ++ 
Sbjct: 214 SGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVEL 273

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
           ++QML  G KPDYITFV +L ACSH G  E   +YF SM KV+GI PG +HYAC++DLL 
Sbjct: 274 FEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLS 333

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ 645
           R+G+L  AK  ++ M  +PDA+VW ALLSACR H +L +G+  A  LF+LEP N   YV 
Sbjct: 334 RAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVL 393

Query: 646 LSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSK 705
           L N+ +  G   +A  VR+ M+S G+RKEPGCSW++  +  ++F   D+ H    +IY  
Sbjct: 394 LCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEM 453

Query: 706 IDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKN 765
           ++++  L+K+ GYV +  FA+ N  EE KE  L YHSEK+A+AFGLL+LP GAPIRI KN
Sbjct: 454 LEKLKELVKKKGYVAETEFAI-NTAEEYKEQSLWYHSEKIALAFGLLSLPAGAPIRIKKN 512

Query: 766 LRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           LR CGDCHT MK+ S ++ R II+RD NRFHHF  G CSCGDYW
Sbjct: 513 LRTCGDCHTVMKFASEIFAREIIVRDINRFHHFTNGICSCGDYW 556



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 131/458 (28%), Positives = 211/458 (46%), Gaps = 42/458 (9%)

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+  G  P+ YT   VL  C+       GEQ H    K  F    FVV+ LVDMYAKC  
Sbjct: 1   MRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCD 60

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES-NQFTFPSIL 242
           +  AE +F+  P                              + +E + + ++ +F S+ 
Sbjct: 61  MLMAEKVFEEMP-----------------------------TLLLENLTALDEVSFSSVF 91

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           +ACA     +FG QVHG  L  G    VY+ ++L DMY KCG  +   +L   +   + V
Sbjct: 92  SACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVV 151

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           +WN MI+ +     +++A + F  M  +    D+ +Y SVL+  A+   L     +H+ I
Sbjct: 152 TWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQI 211

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           +++GF     V ++LI MYAK G+L  AF +F   +D++V+ WT++I  C  HG     +
Sbjct: 212 IRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVV 271

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL-V 481
           + F  M   GI PD++   S+LSAC+    +E G       +K  G        + ++ +
Sbjct: 272 ELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDL 331

Query: 482 YAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGK---GKE-ALQFYDQMLARGTKP 536
            ++ G ++ A R  + M  + D   W AL+  C  +     GKE AL+ +D  L      
Sbjct: 332 LSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFD--LEPDNPG 389

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
           +Y+    +L        A+  R   ES+    G++  P
Sbjct: 390 NYVLLCNILTRNGMLNEADEVRRKMESI----GVRKEP 423



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 170/363 (46%), Gaps = 31/363 (8%)

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
           + +  +V   C+  G L+ G+Q HG A+K       ++   L DMY KC    +   LF 
Sbjct: 84  EVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFS 143

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
                ++ V W  MI  Y  N     A   F  MR +G   ++ ++ S+L +CA ++A  
Sbjct: 144 N-TGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALY 202

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G  +H  I+ SGF  N+ V S+LI MYAKCG L  A ++ E +E  N V W ++I    
Sbjct: 203 QGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQ 262

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN-------IDLNNAKSVHSLIVKT 365
           + G     + LF++M    IK D  T+ SVL+  +            N+   VH   +  
Sbjct: 263 QHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHG--IYP 320

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGSY----EE 420
           G E Y      ++D+ ++ G LD A     LM  K D   W +L++ C  H +     E 
Sbjct: 321 GHEHYA----CIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEV 376

Query: 421 ALKYFSDMRISGICPD----HVVVSSILSACAELTVL-EFGQQVHAVFL-KSGGCSSLSV 474
           ALK F D+      PD    +V++ +IL+    L    E  +++ ++ + K  GCS + +
Sbjct: 377 ALKLF-DLE-----PDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDI 430

Query: 475 DNS 477
            NS
Sbjct: 431 KNS 433



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 124/247 (50%), Gaps = 17/247 (6%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS-NYGLDIEAFELFWQMQLEGY 129
           N++   Y   G   +  KLF+ T  ++  TW+ +I  Y  N+  + +A   FW M+ +G 
Sbjct: 123 NSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYE-DACNSFWMMRRKGS 181

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
            P + +  +VL  C+    L +G   H   I++ F  N  V + L+ MYAKC  + +A  
Sbjct: 182 IPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQ 241

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +F+   D +N V WT +I    Q+G+    +E F  M  EG++ +  TF S+L+AC+   
Sbjct: 242 IFEETED-RNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTG 300

Query: 250 ARDFG-------AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
             + G        +VHG  +  G E      + ++D+ ++ G+LD A+R +E   I  + 
Sbjct: 301 RVEEGFFYFNSMIKVHG--IYPGHEH----YACIVDLLSRAGELDRAKRFIELMPIKPDA 354

Query: 303 S-WNSMI 308
           S W +++
Sbjct: 355 SVWGALL 361



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 5/112 (4%)

Query: 56  GQLFEKMSDRDGFTWN-----TMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSN 110
           G L      R GF  N     ++I  YA  G L +A ++F ET  +N   W+++I     
Sbjct: 204 GTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQ 263

Query: 111 YGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT 162
           +G      ELF QM  EG +P   T  +VL  CS  G ++ G  +    IK 
Sbjct: 264 HGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKV 315



 Score = 41.6 bits (96), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 5/115 (4%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN----ETPFKNFFTW 101
           ++  G + +A Q+FE+  DR+   W  +IAA    G      +LF     E    ++ T+
Sbjct: 230 YAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITF 289

Query: 102 SSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
            S++   S+ G   E F  F  M ++ G  P       ++ L S  G L R ++F
Sbjct: 290 VSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRF 344


>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
 gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
          Length = 913

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 257/693 (37%), Positives = 394/693 (56%), Gaps = 22/693 (3%)

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           ++LR  +    L+ G Q HG   K  F  +  +   L+DMYAKC  +  A  +F    D 
Sbjct: 222 DLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRD- 280

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACAAVSARDFGAQ 256
           +N V+WT ++ G+ Q+G     +    +MR       N++T  + L AC        G  
Sbjct: 281 RNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVG 340

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV-SWNSMIVGFARQG 315
           +HG  + +G+E +  V S+L+ +Y+K G +  ARR+ + + +   + +WN+MI G+A  G
Sbjct: 341 IHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAMISGYAHAG 400

Query: 316 FHKEALSLFKKM------HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE- 368
             ++AL +F++M      H    + D+FT+ S+L              VH+ +  +GF  
Sbjct: 401 HGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFST 460

Query: 369 -GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
                +  AL+DMY K G L  A  VF  ++ K+ I WT+++ G A  G   EAL+ F  
Sbjct: 461 ASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRR 520

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
              SG   D  V+SSI+   A+  ++E G+QVH   +KS   + +S  NS+V +Y KCG 
Sbjct: 521 FWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGL 580

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
            ++A R+F  +  R+V++WT +I G  ++G G+EA+  +++M A G +PD +T++ LL A
Sbjct: 581 PDEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSA 640

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
           CSHAGL +  R YF  + +   ++P  +HYACM+DLLGR+G+L EA+ L+  M  EP   
Sbjct: 641 CSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVG 700

Query: 608 VWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
           VW+ LLSACRVH D+ +G  A + L  ++  N + YV LSN+++ AG W +  +VR  M+
Sbjct: 701 VWQTLLSACRVHKDVAVGREAGDVLLAIDGDNPVNYVTLSNVFAEAGAWRECHKVRDAMR 760

Query: 668 SRGIRKEPGCSWVETNSQVHIFI--SEDRGHPLRTDIYSKIDEIMLLIKEA-GY-VPDMN 723
            RG++K+ GCSWVE   +VH F    ++  HP   DI   + ++   ++E  GY   D+ 
Sbjct: 761 RRGLKKQGGCSWVEIGKEVHFFYGGGDEEAHPQAGDIRRVLRDVETRVREQLGYCADDVQ 820

Query: 724 FALHNVEEEGKEIGLAYHSEKLAVAFGLL-------TLPQGAPIRIFKNLRVCGDCHTAM 776
           FALH+V+EE +   L  HSE+LAV   LL             PIR++KNLRVCGDCH   
Sbjct: 821 FALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGGGHRQPIRVYKNLRVCGDCHEFF 880

Query: 777 KYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           K +SAV  R +++RD+NRFH F+ G CSC DYW
Sbjct: 881 KGLSAVVRRALVVRDANRFHRFEHGTCSCKDYW 913



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 151/543 (27%), Positives = 256/543 (47%), Gaps = 16/543 (2%)

Query: 13  LRCRSKIIGPARYTHNVGNSVKPASDLNRALVDFSN-SGEIDEAGQLFEKMSDRDGFTWN 71
           L C + +  P  +  N     K  +DL RA    S+  G +   G L +     D    N
Sbjct: 199 LLCTNPVAFP--FPTNPMERRKMIADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGN 256

Query: 72  TMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG-YR 130
            +I  YA  G L  A ++F     +N  +W++L+ G+  +G       L  +M+      
Sbjct: 257 NLIDMYAKCGELDMAGEVFGGMRDRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAA 316

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P++YTL   L+ C +   +  G   HG  ++T ++ +  V + LV +Y+K   I +A  +
Sbjct: 317 PNEYTLSASLKACCVTEDMGAGVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRV 376

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV------ESNQFTFPSILTA 244
           F     G+    W  MI+GY+  G+G  A+  FR+MR          + ++FTF S+L A
Sbjct: 377 FDCAGLGRGLATWNAMISGYAHAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKA 436

Query: 245 CAAVSARDFGAQVHGCILSSGFE--ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           C  + A   GAQVH  + +SGF   +N  +  AL+DMY KCG L  A ++ E  E  N +
Sbjct: 437 CGGLGAPREGAQVHAAMAASGFSTASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAI 496

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
            W +++VG A++G   EAL LF++      + D     S++   A    +   + VH   
Sbjct: 497 QWTTVVVGHAQEGQVMEALELFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYG 556

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           VK+         N+++DMY K G  D A  +F  +  ++V+SWT++I G   HG   EA+
Sbjct: 557 VKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFREIPARNVVSWTTMINGLGKHGLGREAV 616

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LVLV 481
             F +MR  G+ PD V   ++LSAC+   +++  ++  +   +       +   + +V +
Sbjct: 617 AMFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDL 676

Query: 482 YAKCGCINDANRVFDSMHTRDVI-TWTALIMGCAQNGKGKEALQFYDQMLA-RGTKP-DY 538
             + G + +A  +  +M     +  W  L+  C  +       +  D +LA  G  P +Y
Sbjct: 677 LGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAIDGDNPVNY 736

Query: 539 ITF 541
           +T 
Sbjct: 737 VTL 739



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 22/188 (11%)

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
           +++ +L A A+ + L  G Q+H    K G  S   + N+L+ +YAKCG ++ A  VF  M
Sbjct: 219 MIADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGM 278

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG-TKPDYITFVGLLFACSHAGLAENA 557
             R+V++WTAL++G  Q+G     L+   +M A     P+  T    L AC         
Sbjct: 279 RDRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACC-------- 330

Query: 558 RWYFESMDKVYGI-----KPG-PDHY---ACMIDLLGRSGKLIEAKALLD-QMVGEPDAT 607
               E M    GI     + G  +HY   + ++ L  + G++ +A+ + D   +G   AT
Sbjct: 331 --VTEDMGAGVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLAT 388

Query: 608 VWKALLSA 615
            W A++S 
Sbjct: 389 -WNAMISG 395


>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 262/773 (33%), Positives = 423/773 (54%), Gaps = 15/773 (1%)

Query: 9   LNFSLRCRSKIIGPARYTH-NVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDG 67
           L +    R K + P  +T  +V NS     DL    +   ++ E+      FE     D 
Sbjct: 106 LGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMG-----FES----DL 156

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           +  N +I  Y+    L  A+ +F E   ++  +W+SLI GY + G   +A +++ + ++ 
Sbjct: 157 YIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMT 216

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G  P  +T+ +VL  C     ++ G   HG   K     +  +  GL+ MY K + + EA
Sbjct: 217 GMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREA 276

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F      K+ V W TMI GY+Q G    +++ F DM ++G   +  +  S + AC  
Sbjct: 277 RRVFSKMA-VKDSVTWNTMICGYAQLGRHEASVKLFMDM-IDGFVPDMLSITSTIRACGQ 334

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
                 G  VH  ++ SGFE +    + LIDMYAKCGDL +A+ + + ++  + V+WNS+
Sbjct: 335 SGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSL 394

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I G+ + G++KE L  FK M     K D  T+  +L+ F+   D+N  + +H  ++K GF
Sbjct: 395 INGYTQSGYYKEGLESFKMMKMER-KPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGF 453

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
           E    + N+L+D+YAK G +D    VF+ M   D+ISW ++I    +        +  ++
Sbjct: 454 EAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINE 513

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           MR  G+ PD   V  IL  C+ L V   G+++H    KSG  S++ + N+L+ +Y+KCG 
Sbjct: 514 MRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGS 573

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           + +  +VF  M  +DV+TWTALI      G+GK+AL+ +  M   G  PD + F+  +FA
Sbjct: 574 LENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFA 633

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
           CSH+G+ +    +F+ M   Y ++P  +HYAC++DLL RSG L +A+  +  M  +PDA+
Sbjct: 634 CSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDAS 693

Query: 608 VWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
           +W ALLSACR  G+  + +R +  + EL   +   YV +SN+Y+T GKW+    VR  MK
Sbjct: 694 LWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMK 753

Query: 668 SRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALH 727
           ++G++KEPG SW+E   +V++F + D+       +   ++ ++ L+ + GYV D+ FALH
Sbjct: 754 TKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQFALH 813

Query: 728 NVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLR--VCGDCHTAMKY 778
           +VEE+ K   L  HSE+LA+AFGLL    G+P+ IF  L    C   +  +KY
Sbjct: 814 DVEEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLIFPTLDDLSCWPMNQILKY 866



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 174/632 (27%), Positives = 308/632 (48%), Gaps = 23/632 (3%)

Query: 22  PARYTHNVGNSVKPASD-LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNT-----MIA 75
           P ++  N  N+ +P+ + L  +L+   +S +     +    +    G + +      +I+
Sbjct: 3   PPKFCSNFNNTPEPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLIS 62

Query: 76  AYANSGRLREAKKLFNE-TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQY 134
            YA       +  +F   +P  N + W+S+I   ++ GL  +A   + +M+ +  +P  +
Sbjct: 63  KYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAF 122

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
           T  +V+  C+    L+ G   H +A++  F+ + ++   L+DMY++   +  A Y+F+  
Sbjct: 123 TFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEM 182

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
            + ++ V+W ++I+GY  NG+   A++ +   R+ G+  + FT  S+L AC ++ A   G
Sbjct: 183 SN-RDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEG 241

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
             VHG I   G   +V + + L+ MY K   L  ARR+     + + V+WN+MI G+A+ 
Sbjct: 242 VAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQL 301

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
           G H+ ++ LF  M    +  D  +  S +     + DL   K VH  ++ +GFE      
Sbjct: 302 GRHEASVKLFMDMIDGFVP-DMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVAC 360

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           N LIDMYAK G+L  A  VF+  + KD ++W SLI G    G Y+E L+ F  M++    
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERK- 419

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           PD V    +LS  ++L  +  G+ +H   +K G  + L + NSL+ VYAKCG ++D  +V
Sbjct: 420 PDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKV 479

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
           F  M   D+I+W  +I             Q  ++M   G  PD  T +G+L  CS   + 
Sbjct: 480 FSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVR 539

Query: 555 ENAR----WYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
              +    + F+S     G +        +I++  + G L     +   M  E D   W 
Sbjct: 540 RQGKEIHGYIFKS-----GFESNVPIGNALIEMYSKCGSLENCIKVFKYM-KEKDVVTWT 593

Query: 611 ALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           AL+SA  ++G+   G++A     ++E    +P
Sbjct: 594 ALISAFGMYGE---GKKALKAFQDMELSGVLP 622


>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 248/659 (37%), Positives = 381/659 (57%), Gaps = 4/659 (0%)

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
            Q H   +      + F++T L+   +    I  A  +F   P  +    W  +I GYS+
Sbjct: 38  RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQV-FPWNAIIRGYSR 96

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYV 272
           N +   A+  +  M++  V  + FTFP +L AC  +S    G  VH  +   GFEA+V+V
Sbjct: 97  NNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFV 156

Query: 273 QSALIDMYAKCGDLDSARRLLEYSEIDNE--VSWNSMIVGFARQGFHKEALSLFKKMHAR 330
           Q+ LI +YAKC  L  AR + E   +     VSW +++  +A+ G   EAL +F +M   
Sbjct: 157 QNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKM 216

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
           D+K D     SVLN F    DL   +S+H+ ++K G E    +  +L  MYAK G +  A
Sbjct: 217 DVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATA 276

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
            ++F+ M+  ++I W ++I+G A +G  ++A+  F +M    + PD + ++S +SACA++
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQV 336

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
             LE  + +     +S     + + ++L+ ++AKCG +  A  VFD    RDV+ W+A+I
Sbjct: 337 GSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMI 396

Query: 511 MGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGI 570
           +G   +G+ +EA+  Y  M   G  P+ +TF+GLL AC+H+G+     W+F  M   + I
Sbjct: 397 VGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMAD-HKI 455

Query: 571 KPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAAN 630
            P   HYAC+IDLLGR+G L +A  ++  M  +P  TVW ALLSAC+ H  +ELG+ AA 
Sbjct: 456 NPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQ 515

Query: 631 NLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFI 690
            LF ++P N   YVQLSN+Y+ A  W+  A VR  MK +G+ K+ GCSWVE   ++  F 
Sbjct: 516 QLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFR 575

Query: 691 SEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFG 750
             D+ HP   +I  +++ I   +KE G+V + + +LH++ +E  E  L  HSE++ +A+G
Sbjct: 576 VGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERITIAYG 635

Query: 751 LLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           L++ PQG  +RI KNLR C +CH A K IS +  R I++RD+NRFHHFK G CSCGDYW
Sbjct: 636 LISTPQGTTLRITKNLRACVNCHAATKLISKLVGREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 229/452 (50%), Gaps = 2/452 (0%)

Query: 67  GFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL 126
           GF    +I A ++ G +  A+++F++ P    F W+++I GYS      +A  ++ +MQL
Sbjct: 53  GFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQL 112

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
               P  +T  ++L+ C     LQ G   H    +  F+ + FV  GL+ +YAKC+ +  
Sbjct: 113 ARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGC 172

Query: 187 AEYLFKMFP-DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           A  +F+  P   +  V+WT +++ Y+QNG   +A+E F  MR   V+ +     S+L A 
Sbjct: 173 ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAF 232

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
             +   + G  +H  ++  G E    +  +L  MYAKCG + +A+ L +  +  N + WN
Sbjct: 233 TCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWN 292

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +MI G+A+ GF K+A+ LF +M  +D++ D  +  S ++  A    L  A+ +   + ++
Sbjct: 293 AMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRS 352

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
            +    F+++ALIDM+AK G+++CA  VF+   D+DV+ W+++I G   HG   EA+  +
Sbjct: 353 DYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLY 412

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             M   G+ P+ V    +L AC    ++  G                     ++ +  + 
Sbjct: 413 RAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYACIIDLLGRA 472

Query: 486 GCINDANRVFDSMHTRDVIT-WTALIMGCAQN 516
           G ++ A  V   M  +  +T W AL+  C ++
Sbjct: 473 GHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 134/469 (28%), Positives = 217/469 (46%), Gaps = 51/469 (10%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF--KNFFTWSSLIYGYSNYGL 113
            Q+F    + D F  N +IA YA   RL  A+ +F   P   +   +W++++  Y+  G 
Sbjct: 143 AQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGE 202

Query: 114 DIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG 173
            +EA E+F QM+    +P    L +VL   +    L++G   H   +K   +    ++  
Sbjct: 203 PVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLIS 262

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
           L  MYAKC  +  A+ LF       N + W  MI+GY++NG+   AI+ F +M  + V  
Sbjct: 263 LNTMYAKCGQVATAKILFDKM-KSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRP 321

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
           +  +  S ++ACA V + +    +   +  S +  +V++ SALIDM+AKCG ++ AR + 
Sbjct: 322 DTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVF 381

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
           + +   + V W++MIVG+   G  +EA+SL++ M    +  +D T+  +L   A N    
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLL--IACN---- 435

Query: 354 NAKSVHSLIVKTGFEGYKFVNN--------------ALIDMYAKQGNLDCAFMVFNLMQ- 398
                HS +V+   EG+ F N                +ID+  + G+LD A+ V   M  
Sbjct: 436 -----HSGMVR---EGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPV 487

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD---HVVVSSILSACAEL--TVL 453
              V  W +L++ C  H   E  L  ++  ++  I P    H V  S L A A L   V 
Sbjct: 488 QPGVTVWGALLSACKKHRHVE--LGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVA 545

Query: 454 EFGQQVHAVFL-KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR 501
           E   ++    L K  GCS + V   L           +  RV D  H R
Sbjct: 546 EVRVRMKEKGLNKDVGCSWVEVRGRL-----------EGFRVGDKSHPR 583



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 143/275 (52%), Gaps = 8/275 (2%)

Query: 346 FASNIDLNNAKS----VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
           +AS ID +  K+    +H+ ++  G +   F+   LI   +  G++  A  VF+ +    
Sbjct: 24  YASLIDSSTHKAQLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQ 83

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
           V  W ++I G + +  +++AL  +S M+++ + PD      +L AC  L+ L+ G+ VHA
Sbjct: 84  VFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHA 143

Query: 462 VFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFD--SMHTRDVITWTALIMGCAQNGKG 519
              + G  + + V N L+ +YAKC  +  A  VF+   +  R +++WTA++   AQNG+ 
Sbjct: 144 QVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEP 203

Query: 520 KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC 579
            EAL+ + QM     KPD +  V +L A +     E  R    S+ K+ G++  PD    
Sbjct: 204 VEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKM-GLETEPDLLIS 262

Query: 580 MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
           +  +  + G++  AK L D+M   P+  +W A++S
Sbjct: 263 LNTMYAKCGQVATAKILFDKM-KSPNLILWNAMIS 296



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/186 (20%), Positives = 81/186 (43%), Gaps = 5/186 (2%)

Query: 29  VGNSVKPAS-DLNRALVDFSNSGEIDEAGQLFEKMSDRD----GFTWNTMIAAYANSGRL 83
           +   V+P +  +  A+   +  G +++A  + E +S  D     F  + +I  +A  G +
Sbjct: 315 INKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSV 374

Query: 84  REAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLC 143
             A+ +F+ T  ++   WS++I GY  +G   EA  L+  M+ +G  P+  T   +L  C
Sbjct: 375 ECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIAC 434

Query: 144 SLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAW 203
           +  G+++ G  F         +        ++D+  +   + +A  + K  P       W
Sbjct: 435 NHSGMVREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVW 494

Query: 204 TTMITG 209
             +++ 
Sbjct: 495 GALLSA 500


>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Glycine max]
          Length = 634

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 237/630 (37%), Positives = 374/630 (59%), Gaps = 10/630 (1%)

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
           K IF+   L   FP   +HV    +        +  +  E    M + G+++N   + ++
Sbjct: 13  KAIFQKPRLLSTFPSNSHHVLNIHI--------HDTRLREALLHMALRGLDTNFQDYNTV 64

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           L  C    A   G +VH  ++ + +   VY+++ LI  Y KC  L  AR + +     N 
Sbjct: 65  LNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNV 124

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           VSW +MI  ++++G+  +ALSLF +M     + ++FT+ +VL     +      + +HS 
Sbjct: 125 VSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSH 184

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           I+K  +E + +V ++L+DMYAK G +  A  +F  + ++DV+S T++I+G A  G  EEA
Sbjct: 185 IIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEA 244

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           L+ F  ++  G+  ++V  +S+L+A + L  L+ G+QVH   L+S   S + + NSL+ +
Sbjct: 245 LELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDM 304

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG-TKPDYIT 540
           Y+KCG +  A R+FD++H R VI+W A+++G +++G+G+E L+ ++ M+     KPD +T
Sbjct: 305 YSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVT 364

Query: 541 FVGLLFACSHAGLAENARWYFESMDK-VYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ 599
            + +L  CSH GL +     F  M      ++P   HY C++D+LGR+G++  A   + +
Sbjct: 365 VLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKK 424

Query: 600 MVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDA 659
           M  EP A +W  LL AC VH +L++GE   + L ++EP NA  YV LSN+Y++AG+WED 
Sbjct: 425 MPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRWEDV 484

Query: 660 ARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYV 719
             +R LM  + + KEPG SW+E +  +H F + D  HP R ++ +K+ E+    KEAGYV
Sbjct: 485 RSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSHPRREEVSAKVQELSARFKEAGYV 544

Query: 720 PDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYI 779
           PD++  LH+V+EE KE  L  HSEKLA+ FGL+  P+  PIR+ KNLR+C DCH   KY 
Sbjct: 545 PDLSCVLHDVDEEQKEKILLSHSEKLALTFGLIATPESVPIRVIKNLRICVDCHNFAKYT 604

Query: 780 SAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           S +Y R + LRD NRFH    G CSCGDYW
Sbjct: 605 SKIYGREVSLRDKNRFHRIVGGKCSCGDYW 634



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 116/336 (34%), Positives = 190/336 (56%), Gaps = 2/336 (0%)

Query: 114 DIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG 173
           D    E    M L G   +    + VL  C  K  ++ G++ H + IKT +    ++ T 
Sbjct: 39  DTRLREALLHMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTR 98

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
           L+  Y KC  + +A ++F + P+ +N V+WT MI+ YSQ GY  +A+  F  M   G E 
Sbjct: 99  LIVFYVKCDSLRDARHVFDVMPE-RNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEP 157

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
           N+FTF ++LT+C   S    G Q+H  I+   +EA+VYV S+L+DMYAK G +  AR + 
Sbjct: 158 NEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIF 217

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
           +     + VS  ++I G+A+ G  +EAL LF+++    ++ +  TY SVL   +    L+
Sbjct: 218 QCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALD 277

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
           + K VH+ ++++    Y  + N+LIDMY+K GNL  A  +F+ + ++ VISW +++ G +
Sbjct: 278 HGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYS 337

Query: 414 YHGSYEEALKYFSDM-RISGICPDHVVVSSILSACA 448
            HG   E L+ F+ M   + + PD V V ++LS C+
Sbjct: 338 KHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCS 373



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 114/355 (32%), Positives = 190/355 (53%), Gaps = 13/355 (3%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +I  Y     LR+A+ +F+  P +N  +W+++I  YS  G   +A  LF QM   G  P+
Sbjct: 99  LIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPN 158

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
           ++T   VL  C        G Q H + IK  ++ + +V + L+DMYAK   I EA  +F+
Sbjct: 159 EFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQ 218

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
             P+ ++ V+ T +I+GY+Q G   +A+E FR ++ EG++SN  T+ S+LTA + ++A D
Sbjct: 219 CLPE-RDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALD 277

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G QVH  +L S   + V +Q++LIDMY+KCG+L  ARR+ +       +SWN+M+VG++
Sbjct: 278 HGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYS 337

Query: 313 RQGFHKEALSLFKKM-HARDIKIDDFTYPSVLNCFA------SNIDLNNAKSVHSLIVKT 365
           + G  +E L LF  M     +K D  T  +VL+  +        +D+    +   + V+ 
Sbjct: 338 KHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQP 397

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYE 419
             + Y  V    +DM  + G ++ AF     M  +     W  L+  C+ H + +
Sbjct: 398 DSKHYGCV----VDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLD 448



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 115/225 (51%), Gaps = 4/225 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           +  ++++  YA  G++ EA+ +F   P ++  + +++I GY+  GLD EA ELF ++Q E
Sbjct: 195 YVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQRE 254

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G + +  T  +VL   S    L  G+Q H + +++       +   L+DMY+KC  +  A
Sbjct: 255 GMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYA 314

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACA 246
             +F    + +  ++W  M+ GYS++G G + +E F  M  E  V+ +  T  ++L+ C+
Sbjct: 315 RRIFDTLHE-RTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCS 373

Query: 247 AVSARDFGAQVHGCILSS--GFEANVYVQSALIDMYAKCGDLDSA 289
                D G  +   + S     + +      ++DM  + G +++A
Sbjct: 374 HGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAA 418



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 6/110 (5%)

Query: 21  GPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           G   + H + + V     L  +L+D +S  G +  A ++F+ + +R   +WN M+  Y+ 
Sbjct: 279 GKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSK 338

Query: 80  SGRLREAKKLFN----ETPFK-NFFTWSSLIYGYSNYGLDIEAFELFWQM 124
            G  RE  +LFN    E   K +  T  +++ G S+ GL+ +  ++F+ M
Sbjct: 339 HGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDM 388


>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
          Length = 1215

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 252/689 (36%), Positives = 402/689 (58%), Gaps = 2/689 (0%)

Query: 71   NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
            N++I  + N GR+ +A+KLF+     +  +W+++I  YS+ G+  + F +F  M+  G R
Sbjct: 486  NSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLR 545

Query: 131  PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            P   TL +++ +C+       G   H   +++  D +  V+  LV+MY+    + +AE+L
Sbjct: 546  PDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFL 605

Query: 191  FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
            F      ++ ++W TMI+ Y QN     A++    +       N  TF S L AC++  A
Sbjct: 606  FWNMSR-RDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGA 664

Query: 251  RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
               G  VH  +L    + N+ V ++LI MY KC  ++ A ++ +     + VS+N +I G
Sbjct: 665  LIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGG 724

Query: 311  FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN-AKSVHSLIVKTGFEG 369
            +A      +A+ +F  M +  IK +  T  ++   FAS+ DL+N  + +H+ I++TGF  
Sbjct: 725  YAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLS 784

Query: 370  YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
             ++V N+LI MYAK GNL+ +  +FN + +K+++SW ++I      G  EEALK F DM+
Sbjct: 785  DEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQ 844

Query: 430  ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
             +G   D V ++  LS+CA L  LE G Q+H + +KSG  S   V N+ + +Y KCG ++
Sbjct: 845  HAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMD 904

Query: 490  DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
            +  +V      R    W  LI G A+ G  KEA + + QM+A G KPDY+TFV LL ACS
Sbjct: 905  EMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACS 964

Query: 550  HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
            HAGL +    Y+ SM   +G+ PG  H  C++DLLGR G+  EA+  +++M   P+  +W
Sbjct: 965  HAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIW 1024

Query: 610  KALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
            ++LLS+ R H +LE+G + A  L EL+P +   YV LSN+Y+T  +W D  ++R  MK+ 
Sbjct: 1025 RSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTI 1084

Query: 670  GIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNV 729
             I K P CSW++  ++V  F   DRGH     IY+K+DE++L ++E GY+ D + ALH+ 
Sbjct: 1085 NINKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVGYIADTSSALHDT 1144

Query: 730  EEEGKEIGLAYHSEKLAVAFGLLTLPQGA 758
            +EE KE  L  HSEKLA+A+GL+ +P+G+
Sbjct: 1145 DEEQKEQNLWNHSEKLALAYGLIVVPEGS 1173



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 155/560 (27%), Positives = 276/560 (49%), Gaps = 18/560 (3%)

Query: 67  GFTWNTMIAAY---ANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
            F  NT++A Y    ++     A  LF+E   +   TW + + G    G   +AFE+   
Sbjct: 274 AFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVRCGSHGKAFEMLRG 333

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGL---LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK 180
           M+  G   S + L +++  C  +G    +  G   H    +     N ++ T L+ +Y  
Sbjct: 334 MREPGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGS 393

Query: 181 CKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
              + +A+ LF   P+ +N V+WT ++   S NGY  +A+  +R MR +GV  N   F +
Sbjct: 394 RGIVSDAQRLFWEMPE-RNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFAT 452

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           +++ C ++     G QV   ++ SG +  V V ++LI M+   G +  A +L +  E  +
Sbjct: 453 VVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHD 512

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
            +SWN+MI  ++ QG   +   +F  M    ++ D  T  S+++  AS+   ++   +HS
Sbjct: 513 TISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHS 572

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
           L +++  +    V NAL++MY+  G L  A  +F  M  +D+ISW ++I+    + +  +
Sbjct: 573 LCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTD 632

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
           ALK    +  +   P+H+  SS L AC+    L  G+ VHA+ L+     +L V NSL+ 
Sbjct: 633 ALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLIT 692

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           +Y KC  + DA +VF SM T D++++  LI G A    G +A+Q +  M + G KP+YIT
Sbjct: 693 MYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYIT 752

Query: 541 FVGLLFACSHAGLAENARWY-FESMDKVYGIKPG--PDHYAC--MIDLLGRSGKLIEAKA 595
            + +     H   A +   + +      Y I+ G   D Y    +I +  + G L  +  
Sbjct: 753 MINI-----HGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTN 807

Query: 596 LLDQMVGEPDATVWKALLSA 615
           + + +  + +   W A+++A
Sbjct: 808 IFNSITNK-NIVSWNAIIAA 826



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 130/431 (30%), Positives = 207/431 (48%), Gaps = 34/431 (7%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           ALV+ +S +G++ +A  LF  MS RD  +WNTMI++Y  +    +A K   +     F T
Sbjct: 588 ALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQL----FHT 643

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
             S                           P+  T  + L  CS  G L  G+  H   +
Sbjct: 644 NES---------------------------PNHLTFSSALGACSSPGALIDGKMVHAIVL 676

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAI 220
           +     N  V   L+ MY KC  + +AE +F+  P   + V++  +I GY+    G KA+
Sbjct: 677 QLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPT-HDIVSYNVLIGGYAVLEDGTKAM 735

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVS-ARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           + F  MR  G++ N  T  +I  + A+ +   ++G  +H  I+ +GF ++ YV ++LI M
Sbjct: 736 QVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITM 795

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           YAKCG+L+S+  +       N VSWN++I    + G  +EAL LF  M     K+D    
Sbjct: 796 YAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCL 855

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
              L+  AS   L     +H L +K+G +   +V NA +DMY K G +D    V      
Sbjct: 856 AECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAI 915

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           +    W +LI+G A +G ++EA + F  M  +G  PD+V   ++LSAC+   +++ G   
Sbjct: 916 RPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDY 975

Query: 460 HAVFLKSGGCS 470
           +     S G S
Sbjct: 976 YNSMASSFGVS 986



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 150/316 (47%), Gaps = 19/316 (6%)

Query: 46   FSNSGEIDEAGQLFEKMSDRDGF-----TWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
            F++S ++   G+       R GF       N++I  YA  G L  +  +FN    KN  +
Sbjct: 760  FASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVS 819

Query: 101  WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
            W+++I      G   EA +LF  MQ  G +  +  L   L  C+    L+ G Q HG  +
Sbjct: 820  WNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGM 879

Query: 161  KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG--KNHVAWTTMITGYSQNGYGFK 218
            K+  D +++VV   +DMY KC  + E   + ++ PD   +    W T+I+GY++ GY  +
Sbjct: 880  KSGLDSDSYVVNAAMDMYGKCGKMDE---MLQVVPDQAIRPQQCWNTLISGYAKYGYFKE 936

Query: 219  AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALI 277
            A E F+ M   G + +  TF ++L+AC+     D G   +  + SS G    +     ++
Sbjct: 937  AEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIV 996

Query: 278  DMYAKCGDLDSARRLLEYSEI-DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
            D+  + G    A + +E   +  N++ W S++   +    HK  L + +K   + +++D 
Sbjct: 997  DLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLL---SSSRTHKN-LEIGRKTAKKLLELDP 1052

Query: 337  F---TYPSVLNCFASN 349
            F    Y  + N +A+N
Sbjct: 1053 FDDSAYVLLSNLYATN 1068



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 57/131 (43%), Gaps = 7/131 (5%)

Query: 155 FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHV--AWTTMITGYSQ 212
            HG A++    L+AF    L+  Y + +    A     +F +  +     W T ++G  +
Sbjct: 38  IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 97

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD----FGAQVHGCILSSGFEA 268
            G    A E  R MR  GV  + F   S++TAC     RD     GA +H     +G   
Sbjct: 98  CGRDGTAFEMLRGMRERGVPLSGFALASLVTACER-RGRDEGIACGAAIHALTHRAGLMG 156

Query: 269 NVYVQSALIDM 279
           NVY+  AL+ +
Sbjct: 157 NVYIGRALLHL 167



 Score = 39.3 bits (90), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 6/128 (4%)

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA---FMVFNLMQDKDVISWTSLITGCAY 414
           +H L V+       F  N L+  Y +Q +   A     +F+ M D+   +W + ++GC  
Sbjct: 38  IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 97

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLE---FGQQVHAVFLKSGGCSS 471
            G    A +    MR  G+      ++S+++AC      E    G  +HA+  ++G   +
Sbjct: 98  CGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGN 157

Query: 472 LSVDNSLV 479
           + +  +L+
Sbjct: 158 VYIGRALL 165


>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
          Length = 770

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 255/684 (37%), Positives = 390/684 (57%), Gaps = 15/684 (2%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           +L +C   G L      HG+ +KT    + FV T LV+ Y +C    +A  LF   P+ K
Sbjct: 84  LLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPE-K 142

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           N V WT +ITGY+ N    +A+E F +M   G   + +T  ++L AC+A +  D G+QVH
Sbjct: 143 NVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVH 202

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR-QGFH 317
           G  +     +   + ++L  MYAK G L+SA R        N ++W +MI   A  + + 
Sbjct: 203 GYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYT 262

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
           +  L+LF  M    +  ++FT  SV++   + +DLN  K V +   K G +    V N+ 
Sbjct: 263 ELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNST 322

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA---------YHGSYE--EALKYFS 426
           + +Y ++G  D A   F  M D  +I+W ++I+G A          H      +ALK F 
Sbjct: 323 MYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFR 382

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
           +++ S + PD    SSILS C+ +  LE G+Q+HA  +K+G  S + V+++LV +Y KCG
Sbjct: 383 NLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCG 442

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
           CI DA + F  M  R ++TWT++I G +Q+G+ +EA+Q ++ M   G +P+ ITFV +L 
Sbjct: 443 CIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLS 502

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ACS+AGLAE A  YF+ M + Y I+P  DHY CM+D+  R G+L +A A + +   EP+ 
Sbjct: 503 ACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNE 562

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
            +W +L++ CR HG++EL   AA+ L EL P     YV L NMY +  +W D ARVRKLM
Sbjct: 563 AIWSSLVAGCRSHGNMELAFYAADRLIELRPKGIETYVLLLNMYISNERWHDVARVRKLM 622

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFAL 726
           K  G+      SW+    +V+ F + D+ H L  ++Y  ++ ++   K  GY P  +  L
Sbjct: 623 KQEGLGVLMDRSWITIKDKVYFFKANDKTHELSDELYQLLENLLEKAKTIGYEPYQSAEL 682

Query: 727 HNVEEEGKEIG--LAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
            + E++ K     + +HSE+LAVA GLL  P GA +R+ KN+ +C DCH+++K+ S +  
Sbjct: 683 SDSEDDKKPPAGSVRHHSERLAVALGLLQTPPGATVRVTKNITMCRDCHSSIKFFSLLAN 742

Query: 785 RHIILRDSNRFHHFKAGNCSCGDY 808
           R I++RDS R H FK G CSCGD+
Sbjct: 743 REIVVRDSKRLHKFKDGRCSCGDF 766



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 156/523 (29%), Positives = 268/523 (51%), Gaps = 29/523 (5%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G + +  +  D F   +++ AY   G  ++A+ LF++ P KN  TW++LI GY+     +
Sbjct: 102 GHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKNVVTWTALITGYTVNSQLL 161

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA E+F +M   G  PS YTL  +L  CS       G Q HGY IK        +   L 
Sbjct: 162 EALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHGYTIKYRALSITSIGNSLC 221

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQN-GYGFKAIECFRDMRVEGVESN 234
            MYAK   +  A   F+M PD KN + WTTMI+  +++  Y    +  F DM ++GV  N
Sbjct: 222 RMYAKSGSLESAMRAFRMVPD-KNVITWTTMISACAEDENYTELGLTLFLDMLMDGVLPN 280

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
           +FT  S+++ C      + G QV       G + N+ V+++ + +Y + G+ D A R  E
Sbjct: 281 EFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFE 340

Query: 295 YSEIDNEVSWNSMIVGFAR-------------QGFHKEALSLFKKMHARDIKIDDFTYPS 341
             +  + ++WN+MI G+A+             +GF  +AL +F+ +    +K D FT+ S
Sbjct: 341 EMDDVSIITWNAMISGYAQIMETAKDDLHARSRGF--QALKVFRNLKRSAMKPDLFTFSS 398

Query: 342 VLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
           +L+  +S + L   + +H+  +KTGF     VN+AL++MY K G ++ A   F  M  + 
Sbjct: 399 ILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRT 458

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
           +++WTS+I+G + HG  +EA++ F DMR +G+ P+ +    +LSAC+   + E  +    
Sbjct: 459 LVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYFD 518

Query: 462 VFLKSGGCSSLSVDN--SLVLVYAKCGCINDA-NRVFDSMHTRDVITWTALIMGCAQNGK 518
           +  +      + VD+   +V ++ + G ++DA   +  +    +   W++L+ GC  +G 
Sbjct: 519 MMKEEYKIEPI-VDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGN 577

Query: 519 GKEALQFYDQMLARGTKPDYI-TFVGLLFACSHAGLAENARWY 560
            + A    D+++    +P  I T+V LL          N RW+
Sbjct: 578 MELAFYAADRLIE--LRPKGIETYVLLLNM-----YISNERWH 613



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 138/520 (26%), Positives = 230/520 (44%), Gaps = 51/520 (9%)

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M  EG       +  +L  C    +      +HG ++ +G  A+++V ++L++ Y +CG 
Sbjct: 69  MLREGKTVQSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGA 128

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN- 344
              AR L +     N V+W ++I G+       EAL +F +M         +T  ++LN 
Sbjct: 129 SQDARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNA 188

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
           C ASN + +    VH   +K        + N+L  MYAK G+L+ A   F ++ DK+VI+
Sbjct: 189 CSASN-NADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVIT 247

Query: 405 WTSLITGCAYHGSYEE-ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVF 463
           WT++I+ CA   +Y E  L  F DM + G+ P+   ++S++S C     L  G+QV A  
Sbjct: 248 WTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFC 307

Query: 464 LKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ-------- 515
            K G  +++ V NS + +Y + G  ++A R F+ M    +ITW A+I G AQ        
Sbjct: 308 FKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDD 367

Query: 516 ---NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKP 572
                +G +AL+ +  +     KPD  TF  +L  CS     E          K  G   
Sbjct: 368 LHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKT-GFLS 426

Query: 573 GPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNL 632
                + ++++  + G + +A     +M      T W +++S    HG      + A  L
Sbjct: 427 DVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVT-WTSMISGYSQHGR----PQEAIQL 481

Query: 633 FE------LEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEP-----GCSWVE 681
           FE      + P N + +V + +  S AG  E A     +MK    + EP     GC    
Sbjct: 482 FEDMRFAGVRP-NEITFVCVLSACSYAGLAEKAEHYFDMMKEE-YKIEPIVDHYGC---- 535

Query: 682 TNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPD 721
               V +F+   R           +D+    I+  G+ P+
Sbjct: 536 ---MVDMFVRLGR-----------LDDAFAFIRRTGFEPN 561



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 156/332 (46%), Gaps = 28/332 (8%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  +   GE DEA + FE+M D    TWN MI+ YA             ET   +  
Sbjct: 320 NSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQ----------IMETAKDDLH 369

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
             S             +A ++F  ++    +P  +T  ++L +CS    L++GEQ H   
Sbjct: 370 ARSR----------GFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQT 419

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           IKT F  +  V + LV+MY KC CI +A   F      +  V WT+MI+GYSQ+G   +A
Sbjct: 420 IKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEM-SIRTLVTWTSMISGYSQHGRPQEA 478

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ--SALI 277
           I+ F DMR  GV  N+ TF  +L+AC+     +  A+ +  ++   ++    V     ++
Sbjct: 479 IQLFEDMRFAGVRPNEITFVCVLSACSYAGLAE-KAEHYFDMMKEEYKIEPIVDHYGCMV 537

Query: 278 DMYAKCGDLDSARRLLEYSEID-NEVSWNSMIVGFARQGFHKEALSLFKKM-HARDIKID 335
           DM+ + G LD A   +  +  + NE  W+S++ G    G  + A     ++   R   I+
Sbjct: 538 DMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLIELRPKGIE 597

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
             TY  +LN + SN   ++   V  L+ + G 
Sbjct: 598 --TYVLLLNMYISNERWHDVARVRKLMKQEGL 627



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 186/444 (41%), Gaps = 52/444 (11%)

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEA----LSLFKKMHA-RDIK- 333
           +   G  DS R         ++ +WN   +  A+ G   EA    L + + M   R+ K 
Sbjct: 16  FPAAGGADSRRPPPSSVSAADKNNWNGRSIQAAQNGSTMEAPLRPLDVGEAMAMLREGKT 75

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
           +    Y  +L+       L  A+++H  +VKTG     FV  +L++ Y + G    A  +
Sbjct: 76  VQSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSL 135

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           F+ M +K+V++WT+LITG   +    EAL+ F +M  +G  P H  + ++L+AC+     
Sbjct: 136 FDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNA 195

Query: 454 EFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC 513
           + G QVH   +K    S  S+ NSL  +YAK G +  A R F  +  ++VITWT +I  C
Sbjct: 196 DLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISAC 255

Query: 514 AQNGKGKE-ALQFYDQMLARGTKPDYITFVGLLFACS----------------------- 549
           A++    E  L  +  ML  G  P+  T   ++  C                        
Sbjct: 256 AEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTN 315

Query: 550 ------------HAGLAENARWYFESMDKVYGIKPGP--DHYACMI-----DLLGRSGKL 590
                         G  + A  +FE MD V  I        YA ++     DL  RS   
Sbjct: 316 IPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGF 375

Query: 591 IEAKAL--LDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM-NAMPYVQLS 647
              K    L +   +PD   + ++LS C     LE GE+      +   + + +    L 
Sbjct: 376 QALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALV 435

Query: 648 NMYSTAGKWEDAARVRKLMKSRGI 671
           NMY+  G  EDA +    M  R +
Sbjct: 436 NMYNKCGCIEDATKAFVEMSIRTL 459



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 38/201 (18%)

Query: 39  LNRALVDFSNS-GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           +N ALV+  N  G I++A + F +MS R   TW +MI+ Y+  GR +EA +LF +     
Sbjct: 430 VNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFED----- 484

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                                     M+  G RP++ T   VL  CS  GL ++ E +  
Sbjct: 485 --------------------------MRFAGVRPNEITFVCVLSACSYAGLAEKAEHYFD 518

Query: 158 YAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG- 214
             +K  + +   V     +VDM+ +   + +A    +      N   W++++ G   +G 
Sbjct: 519 M-MKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGN 577

Query: 215 --YGFKAIECFRDMRVEGVES 233
               F A +   ++R +G+E+
Sbjct: 578 MELAFYAADRLIELRPKGIET 598


>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 1000

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 252/689 (36%), Positives = 402/689 (58%), Gaps = 2/689 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N++I  + N GR+ +A+KLF+     +  +W+++I  YS+ G+  + F +F  M+  G R
Sbjct: 184 NSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLR 243

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P   TL +++ +C+       G   H   +++  D +  V+  LV+MY+    + +AE+L
Sbjct: 244 PDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFL 303

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F      ++ ++W TMI+ Y QN     A++    +       N  TF S L AC++  A
Sbjct: 304 FWNMSR-RDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGA 362

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              G  VH  +L    + N+ V ++LI MY KC  ++ A ++ +     + VS+N +I G
Sbjct: 363 LIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGG 422

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN-AKSVHSLIVKTGFEG 369
           +A      +A+ +F  M +  IK +  T  ++   FAS+ DL+N  + +H+ I++TGF  
Sbjct: 423 YAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLS 482

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
            ++V N+LI MYAK GNL+ +  +FN + +K+++SW ++I      G  EEALK F DM+
Sbjct: 483 DEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQ 542

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
            +G   D V ++  LS+CA L  LE G Q+H + +KSG  S   V N+ + +Y KCG ++
Sbjct: 543 HAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMD 602

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
           +  +V      R    W  LI G A+ G  KEA + + QM+A G KPDY+TFV LL ACS
Sbjct: 603 EMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACS 662

Query: 550 HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
           HAGL +    Y+ SM   +G+ PG  H  C++DLLGR G+  EA+  +++M   P+  +W
Sbjct: 663 HAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIW 722

Query: 610 KALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
           ++LLS+ R H +LE+G + A  L EL+P +   YV LSN+Y+T  +W D  ++R  MK+ 
Sbjct: 723 RSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTI 782

Query: 670 GIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNV 729
            I K P CSW++  ++V  F   DRGH     IY+K+DE++L ++E GY+ D + ALH+ 
Sbjct: 783 NINKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVGYIADTSSALHDT 842

Query: 730 EEEGKEIGLAYHSEKLAVAFGLLTLPQGA 758
           +EE KE  L  HSEKLA+A+GL+ +P+G+
Sbjct: 843 DEEQKEQNLWNHSEKLALAYGLIVVPEGS 871



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 147/524 (28%), Positives = 261/524 (49%), Gaps = 15/524 (2%)

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL---LQRGEQFH 156
           TW + + G    G D  AFE+   M+  G   S + L +++  C  +G    +  G   H
Sbjct: 8   TWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIH 67

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
               +     N ++ T L+ +Y     + +A+ LF   P+ +N V+WT ++   S NGY 
Sbjct: 68  ALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPE-RNVVSWTALMVALSSNGYL 126

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
            +A+  +R MR +GV  N   F ++++ C ++     G QV   ++ SG +  V V ++L
Sbjct: 127 EEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSL 186

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           I M+   G +  A +L +  E  + +SWN+MI  ++ QG   +   +F  M    ++ D 
Sbjct: 187 ITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDA 246

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
            T  S+++  AS+   ++   +HSL +++  +    V NAL++MY+  G L  A  +F  
Sbjct: 247 TTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWN 306

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
           M  +D+ISW ++I+    + +  +ALK    +  +   P+H+  SS L AC+    L  G
Sbjct: 307 MSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDG 366

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
           + VHA+ L+     +L V NSL+ +Y KC  + DA +VF SM T D++++  LI G A  
Sbjct: 367 KMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVL 426

Query: 517 GKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWY-FESMDKVYGIKPG-- 573
             G +A+Q +  M + G KP+YIT + +     H   A +   + +      Y I+ G  
Sbjct: 427 EDGTKAMQVFSWMRSAGIKPNYITMINI-----HGSFASSNDLHNYGRPLHAYIIRTGFL 481

Query: 574 PDHYAC--MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
            D Y    +I +  + G L  +  + + +  + +   W A+++A
Sbjct: 482 SDEYVANSLITMYAKCGNLESSTNIFNSITNK-NIVSWNAIIAA 524



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 157/576 (27%), Positives = 273/576 (47%), Gaps = 19/576 (3%)

Query: 56  GQLFEKMSDRDGFTWNTMIAA-----YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSN 110
           G     ++ R G   N  I       Y + G + +A++LF E P +N  +W++L+   S+
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSS 122

Query: 111 YGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV 170
            G   EA   + QM+ +G   +      V+ LC        G Q     I +       V
Sbjct: 123 NGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSV 182

Query: 171 VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG 230
              L+ M+     + +AE LF    +  + ++W  MI+ YS  G   K    F DMR  G
Sbjct: 183 ANSLITMFGNLGRVHDAEKLFDRMEE-HDTISWNAMISMYSHQGICSKCFLVFSDMRHHG 241

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           +  +  T  S+++ CA+      G+ +H   L S  +++V V +AL++MY+  G L  A 
Sbjct: 242 LRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAE 301

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
            L       + +SWN+MI  + +     +AL    ++   +   +  T+ S L   +S  
Sbjct: 302 FLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPG 361

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
            L + K VH+++++   +    V N+LI MY K  +++ A  VF  M   D++S+  LI 
Sbjct: 362 ALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIG 421

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLE-FGQQVHAVFLKSGGC 469
           G A      +A++ FS MR +GI P+++ + +I  + A    L  +G+ +HA  +++G  
Sbjct: 422 GYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFL 481

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
           S   V NSL+ +YAKCG +  +  +F+S+  +++++W A+I    Q G G+EAL+ +  M
Sbjct: 482 SDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDM 541

Query: 530 LARGTKPDYITFVGLLFAC-SHAGLAENARWYFESMDKVYGIKPGPDHYACMI----DLL 584
              G K D +     L +C S A L E  + +        G+K G D  + ++    D+ 
Sbjct: 542 QHAGNKLDRVCLAECLSSCASLASLEEGMQLHG------LGMKSGLDSDSYVVNAAMDMY 595

Query: 585 GRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
           G+ GK+ E   ++      P    W  L+S    +G
Sbjct: 596 GKCGKMDEMLQVVPDQAIRPQ-QCWNTLISGYAKYG 630



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 130/431 (30%), Positives = 207/431 (48%), Gaps = 34/431 (7%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           ALV+ +S +G++ +A  LF  MS RD  +WNTMI++Y  +    +A K   +     F T
Sbjct: 286 ALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQL----FHT 341

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
             S                           P+  T  + L  CS  G L  G+  H   +
Sbjct: 342 NES---------------------------PNHLTFSSALGACSSPGALIDGKMVHAIVL 374

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAI 220
           +     N  V   L+ MY KC  + +AE +F+  P   + V++  +I GY+    G KA+
Sbjct: 375 QLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPT-HDIVSYNVLIGGYAVLEDGTKAM 433

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVS-ARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           + F  MR  G++ N  T  +I  + A+ +   ++G  +H  I+ +GF ++ YV ++LI M
Sbjct: 434 QVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITM 493

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           YAKCG+L+S+  +       N VSWN++I    + G  +EAL LF  M     K+D    
Sbjct: 494 YAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCL 553

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
              L+  AS   L     +H L +K+G +   +V NA +DMY K G +D    V      
Sbjct: 554 AECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAI 613

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           +    W +LI+G A +G ++EA + F  M  +G  PD+V   ++LSAC+   +++ G   
Sbjct: 614 RPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDY 673

Query: 460 HAVFLKSGGCS 470
           +     S G S
Sbjct: 674 YNSMASSFGVS 684



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 150/316 (47%), Gaps = 19/316 (6%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGF-----TWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           F++S ++   G+       R GF       N++I  YA  G L  +  +FN    KN  +
Sbjct: 458 FASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVS 517

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
           W+++I      G   EA +LF  MQ  G +  +  L   L  C+    L+ G Q HG  +
Sbjct: 518 WNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGM 577

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG--KNHVAWTTMITGYSQNGYGFK 218
           K+  D +++VV   +DMY KC  + E   + ++ PD   +    W T+I+GY++ GY  +
Sbjct: 578 KSGLDSDSYVVNAAMDMYGKCGKMDE---MLQVVPDQAIRPQQCWNTLISGYAKYGYFKE 634

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALI 277
           A E F+ M   G + +  TF ++L+AC+     D G   +  + SS G    +     ++
Sbjct: 635 AEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIV 694

Query: 278 DMYAKCGDLDSARRLLEYSEI-DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           D+  + G    A + +E   +  N++ W S++   +    HK  L + +K   + +++D 
Sbjct: 695 DLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLL---SSSRTHKN-LEIGRKTAKKLLELDP 750

Query: 337 F---TYPSVLNCFASN 349
           F    Y  + N +A+N
Sbjct: 751 FDDSAYVLLSNLYATN 766



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 9/223 (4%)

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLE-- 454
           M D+   +W + ++GC   G    A +    MR  G+      ++S+++AC      E  
Sbjct: 1   MADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGI 60

Query: 455 -FGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC 513
             G  +HA+  ++G   ++ +  +L+ +Y   G ++DA R+F  M  R+V++WTAL++  
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVAL 120

Query: 514 AQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY--GIK 571
           + NG  +EAL+ Y QM   G   +   F  ++  C   G  EN     +   +V   G++
Sbjct: 121 SSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLC---GSLENEVPGLQVASQVIVSGLQ 177

Query: 572 PGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
                   +I + G  G++ +A+ L D+M  E D   W A++S
Sbjct: 178 NQVSVANSLITMFGNLGRVHDAEKLFDRM-EEHDTISWNAMIS 219


>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
           1
 gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 684

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 253/664 (38%), Positives = 389/664 (58%), Gaps = 4/664 (0%)

Query: 149 LQRGEQFHGYAIKTC-FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
           ++ G   H   +KT       F+   L++MY+K      A  + ++ P  +N V+WT++I
Sbjct: 22  MRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTP-ARNVVSWTSLI 80

Query: 208 TGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFE 267
           +G +QNG+   A+  F +MR EGV  N FTFP    A A++     G Q+H   +  G  
Sbjct: 81  SGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRI 140

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM 327
            +V+V  +  DMY K    D AR+L +     N  +WN+ I      G  +EA+  F + 
Sbjct: 141 LDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEF 200

Query: 328 HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL 387
              D   +  T+ + LN  +  + LN    +H L++++GF+    V N LID Y K   +
Sbjct: 201 RRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQI 260

Query: 388 DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSAC 447
             + ++F  M  K+ +SW SL+     +   E+A   +   R   +     ++SS+LSAC
Sbjct: 261 RSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSAC 320

Query: 448 AELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWT 507
           A +  LE G+ +HA  +K+    ++ V ++LV +Y KCGCI D+ + FD M  ++++T  
Sbjct: 321 AGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRN 380

Query: 508 ALIMGCAQNGKGKEALQFYDQMLARG--TKPDYITFVGLLFACSHAGLAENARWYFESMD 565
           +LI G A  G+   AL  +++M  RG    P+Y+TFV LL ACS AG  EN    F+SM 
Sbjct: 381 SLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMR 440

Query: 566 KVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELG 625
             YGI+PG +HY+C++D+LGR+G +  A   + +M  +P  +VW AL +ACR+HG  +LG
Sbjct: 441 STYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLG 500

Query: 626 ERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQ 685
             AA NLF+L+P ++  +V LSN ++ AG+W +A  VR+ +K  GI+K  G SW+   +Q
Sbjct: 501 LLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQ 560

Query: 686 VHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKL 745
           VH F ++DR H L  +I + + ++   ++ AGY PD+  +L+++EEE K   +++HSEKL
Sbjct: 561 VHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKL 620

Query: 746 AVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSC 805
           A+AFGLL+LP   PIRI KNLR+CGDCH+  K++S    R II+RD+NRFH FK G CSC
Sbjct: 621 ALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSC 680

Query: 806 GDYW 809
            DYW
Sbjct: 681 KDYW 684



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 218/460 (47%), Gaps = 5/460 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N +I  Y+       A+ +   TP +N  +W+SLI G +  G    A   F++M+ E
Sbjct: 43  FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRRE 102

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G  P+ +T     +  +   L   G+Q H  A+K    L+ FV     DMY K +   +A
Sbjct: 103 GVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDA 162

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             LF   P+ +N   W   I+    +G   +AIE F + R      N  TF + L AC+ 
Sbjct: 163 RKLFDEIPE-RNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSD 221

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
               + G Q+HG +L SGF+ +V V + LID Y KC  + S+  +       N VSW S+
Sbjct: 222 WLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSL 281

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           +  + +    ++A  L+ +     ++  DF   SVL+  A    L   +S+H+  VK   
Sbjct: 282 VAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACV 341

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
           E   FV +AL+DMY K G ++ +   F+ M +K++++  SLI G A+ G  + AL  F +
Sbjct: 342 ERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEE 401

Query: 428 M--RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL-VYAK 484
           M  R  G  P+++   S+LSAC+    +E G ++      + G    +   S ++ +  +
Sbjct: 402 MAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGR 461

Query: 485 CGCINDANRVFDSMHTRDVIT-WTALIMGCAQNGKGKEAL 523
            G +  A      M  +  I+ W AL   C  +GK +  L
Sbjct: 462 AGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGL 501



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 204/417 (48%), Gaps = 20/417 (4%)

Query: 82  RLRE-AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVL 140
           RLR+ A+KLF+E P +N  TW++ I      G   EA E F + +     P+  T    L
Sbjct: 157 RLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFL 216

Query: 141 RLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNH 200
             CS    L  G Q HG  +++ FD +  V  GL+D Y KCK I  +E +F      KN 
Sbjct: 217 NACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEM-GTKNA 275

Query: 201 VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
           V+W +++  Y QN    KA   +   R + VE++ F   S+L+ACA ++  + G  +H  
Sbjct: 276 VSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAH 335

Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEA 320
            + +  E  ++V SAL+DMY KCG ++ + +  +     N V+ NS+I G+A QG    A
Sbjct: 336 AVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMA 395

Query: 321 LSLFKKMHARDI--KIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
           L+LF++M  R      +  T+ S+L+ C  +    N  K   S+    G E      + +
Sbjct: 396 LALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCI 455

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEAL-----KYFSDMRIS 431
           +DM  + G ++ A+     M  +  IS W +L   C  HG  +  L      +  D + S
Sbjct: 456 VDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDS 515

Query: 432 GICPDHVVVSSILSAC---AELTVLEFGQQVHAVFLKSG-GCSSLSVDNSLVLVYAK 484
           G   +HV++S+  +A    AE   +   +++  V +K G G S ++V N +    AK
Sbjct: 516 G---NHVLLSNTFAAAGRWAEANTVR--EELKGVGIKKGAGYSWITVKNQVHAFQAK 567



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 121/248 (48%), Gaps = 5/248 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D    N +I  Y    ++R ++ +F E   KN  +W SL+  Y     D +A  L+ +
Sbjct: 241 DTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLR 300

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
            + +    S + + +VL  C+    L+ G   H +A+K C +   FV + LVDMY KC C
Sbjct: 301 SRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGC 360

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM--RVEGVESNQFTFPSI 241
           I ++E  F   P+ KN V   ++I GY+  G    A+  F +M  R  G   N  TF S+
Sbjct: 361 IEDSEQAFDEMPE-KNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSL 419

Query: 242 LTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           L+AC+   A + G ++   + S+ G E      S ++DM  + G ++ A   ++   I  
Sbjct: 420 LSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQP 479

Query: 301 EVS-WNSM 307
            +S W ++
Sbjct: 480 TISVWGAL 487



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 18/196 (9%)

Query: 20  IGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYA 78
           +G + + H V   V+    +  ALVD +   G I+++ Q F++M +++  T N++I  YA
Sbjct: 328 LGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYA 387

Query: 79  NSGRLREAKKLFNET------PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRP 131
           + G++  A  LF E       P  N+ T+ SL+   S  G      ++F  M+   G  P
Sbjct: 388 HQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEP 447

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD----MYAKCKC-IFE 186
                  ++ +    G+++R  +F    IK         V G +     M+ K +  +  
Sbjct: 448 GAEHYSCIVDMLGRAGMVERAYEF----IKKMPIQPTISVWGALQNACRMHGKPQLGLLA 503

Query: 187 AEYLFKMFP-DGKNHV 201
           AE LFK+ P D  NHV
Sbjct: 504 AENLFKLDPKDSGNHV 519


>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
 gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
 gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 721

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 264/652 (40%), Positives = 385/652 (59%), Gaps = 12/652 (1%)

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
           N F    +V  YAK   I  A  LF   P   + V++ T+I+GY+     F A+  F+ M
Sbjct: 73  NVFSYNVIVKAYAKDSKIHIARQLFDEIPQ-PDTVSYNTLISGYADARETFAAMVLFKRM 131

Query: 227 RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDL 286
           R  G E + FT   ++ AC      D   Q+H   +S GF++   V +A +  Y+K G L
Sbjct: 132 RKLGFEVDGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLL 189

Query: 287 DSARRLL-EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
             A  +     E+ +EVSWNSMIV + +     +AL+L+K+M  +  KID FT  SVLN 
Sbjct: 190 REAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA 249

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF---MVFNLMQDKDV 402
             S   L   +  H  ++K GF     V + LID Y+K G  D  +    VF  +   D+
Sbjct: 250 LTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDL 309

Query: 403 ISWTSLITGCAYHGSY-EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
           + W ++I+G + +    EEA+K F  M+  G  PD      + SAC+ L+     +Q+H 
Sbjct: 310 VVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHG 369

Query: 462 VFLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGK 520
           + +KS   S+ +SV+N+L+ +Y K G + DA  VFD M   + +++  +I G AQ+G G 
Sbjct: 370 LAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGT 429

Query: 521 EALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACM 580
           EAL  Y +ML  G  P+ ITFV +L AC+H G  +  + YF +M + + I+P  +HY+CM
Sbjct: 430 EALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCM 489

Query: 581 IDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNA 640
           IDLLGR+GKL EA+  +D M  +P +  W ALL ACR H ++ L ERAAN L  ++P+ A
Sbjct: 490 IDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAA 549

Query: 641 MPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRT 700
            PYV L+NMY+ A KWE+ A VRK M+ + IRK+PGCSW+E   + H+F++ED  HP+  
Sbjct: 550 TPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIR 609

Query: 701 DIYSKIDEIMLLIKEAGYVPDMNFAL---HNVEEEGKEIGLAYHSEKLAVAFGLLTLPQG 757
           ++   ++E+M  +K+ GYV D  +A+       E  +E+ L +HSEKLAVAFGL++   G
Sbjct: 610 EVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDG 669

Query: 758 APIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             + + KNLR+CGDCH A+K++SAV  R II+RD+ RFH FK G CSCGDYW
Sbjct: 670 EELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 144/523 (27%), Positives = 263/523 (50%), Gaps = 10/523 (1%)

Query: 2   FKLDFKILNFSLRCRSKIIGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFE 60
           FK    +L  S+  R    G + +   V + V  ++ L+   V+ +S  G +  A   F 
Sbjct: 8   FKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFY 67

Query: 61  KMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFEL 120
              + + F++N ++ AYA   ++  A++LF+E P  +  ++++LI GY++      A  L
Sbjct: 68  STEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVL 127

Query: 121 FWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK 180
           F +M+  G+    +TL  ++  C  +  L +  Q H +++   FD  + V    V  Y+K
Sbjct: 128 FKRMRKLGFEVDGFTLSGLIAACCDRVDLIK--QLHCFSVSGGFDSYSSVNNAFVTYYSK 185

Query: 181 CKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
              + EA  +F    + ++ V+W +MI  Y Q+  G KA+  +++M  +G + + FT  S
Sbjct: 186 GGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLAS 245

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS---ARRLLEYSE 297
           +L A  ++     G Q HG ++ +GF  N +V S LID Y+KCG  D    + ++ +   
Sbjct: 246 VLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEIL 305

Query: 298 IDNEVSWNSMIVGFA-RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
             + V WN+MI G++  +   +EA+  F++M     + DD ++  V +  ++    +  K
Sbjct: 306 SPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCK 365

Query: 357 SVHSLIVKTGFEGYKF-VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
            +H L +K+     +  VNNALI +Y K GNL  A  VF+ M + + +S+  +I G A H
Sbjct: 366 QIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQH 425

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G   EAL  +  M  SGI P+ +   ++LSACA    ++ GQ+      ++      +  
Sbjct: 426 GHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEH 485

Query: 476 NS-LVLVYAKCGCINDANRVFDSM-HTRDVITWTALIMGCAQN 516
            S ++ +  + G + +A R  D+M +    + W AL+  C ++
Sbjct: 486 YSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKH 528



 Score = 47.8 bits (112), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 64/125 (51%), Gaps = 5/125 (4%)

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
           +L + AE  +   G+ +HA+++KS   SS  + N  V +Y+KCG ++ A   F S    +
Sbjct: 15  LLKSVAERDLFT-GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPN 73

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
           V ++  ++   A++ K   A Q +D++     +PD +++  L+   + A     A   F+
Sbjct: 74  VFSYNVIVKAYAKDSKIHIARQLFDEI----PQPDTVSYNTLISGYADARETFAAMVLFK 129

Query: 563 SMDKV 567
            M K+
Sbjct: 130 RMRKL 134


>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 247/657 (37%), Positives = 386/657 (58%), Gaps = 3/657 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D    N +++ Y   G L+EA+ +F+  P KN  +W+S+I GYS YG +  A  L+ QM 
Sbjct: 132 DMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQML 191

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G+ P  +T  ++++ CS     +   Q H + +K+ F  +      L+ MY K   + 
Sbjct: 192 RSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMA 251

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV-ESNQFTFPSILTA 244
           +A  +F      K+ ++W +MI G+SQ GY  +A+  FR+M  + V + N+F F S  +A
Sbjct: 252 DAINVFSRIII-KDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSA 310

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C+ +   D G Q+HG  +  G  ++++   +L DMYAKCG L+SAR +  + E  + V+W
Sbjct: 311 CSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAW 370

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N++I GFA     KE+ S F +M    +  +D T  S+L   +  + LN+   VHS IVK
Sbjct: 371 NAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVK 430

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGSYEEALK 423
            GF     V N+L+ MY+K  NL+ A  VF  + +K D++SW +L+T C       E L+
Sbjct: 431 MGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLR 490

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
               M  S I PDHV ++++L +  ++   E G Q+H   +KSG    +SV N+L+ +Y 
Sbjct: 491 LTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYT 550

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG +  A ++FDS+   D+I+W++LI+G AQ G GKEA + +  M   G KP+ ITFVG
Sbjct: 551 KCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVG 610

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           +L ACSH G+ E     + +M + Y I P  +H +CM+DLL R+G L  A+  + QM   
Sbjct: 611 ILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIRQMPFV 670

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
           PD  VWK LL+AC+VHG+LE+G+RAA N+ +++P N+   V L N+++++G W+D AR+R
Sbjct: 671 PDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLR 730

Query: 664 KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
             M+   + K PG SW+E   +VH+F++ED  HP R  IY+ ++E+ML I +    P
Sbjct: 731 SSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNLHPERGKIYTMLEELMLQILDDSCDP 787



 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 151/505 (29%), Positives = 264/505 (52%), Gaps = 15/505 (2%)

Query: 115 IEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
           ++AF++F +      +   YT  +++  CS    L+ G + H + +   +  +  +   +
Sbjct: 82  LKAFDIFQKCSSSPLKSVTYT--HLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHI 139

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           + MY KC  + EA  +F   P  KN V+WT+MI+GYS+ G    AI  +  M   G   +
Sbjct: 140 LSMYGKCGSLKEARNMFDSMP-LKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPD 198

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
            FTF SI+ +C+ +       Q+H  +L S F A++  Q+ALI MY K   +  A  +  
Sbjct: 199 HFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFS 258

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI-KIDDFTYPSVLNCFASNIDLN 353
              I + +SW SMI GF++ G+  EAL  F++M ++ + + ++F + S  +  +  ++ +
Sbjct: 259 RIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPD 318

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
             + +H L +K G     F   +L DMYAK G L+ A  VF  ++  D+++W ++I G A
Sbjct: 319 CGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFA 378

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
              + +E+  +FS MR +G+ P+ V V S+L AC+E  +L  G QVH+  +K G    + 
Sbjct: 379 SVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIP 438

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
           V NSL+ +Y+KC  +NDA +VF+ +  + D+++W  L+  C Q  +  E L+    M A 
Sbjct: 439 VCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFAS 498

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH----YACMIDLLGRSG 588
             KPD++T   +L +       + A +   S    + +K G +        +I++  + G
Sbjct: 499 RIKPDHVTLTNVLVSS-----GQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCG 553

Query: 589 KLIEAKALLDQMVGEPDATVWKALL 613
            L  A+ + D  +G PD   W +L+
Sbjct: 554 SLECARKMFDS-IGNPDIISWSSLI 577



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 135/480 (28%), Positives = 228/480 (47%), Gaps = 35/480 (7%)

Query: 216 GFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSA 275
             KA + F+      ++S   T+  ++ AC+++ + + G ++H  +L+  ++ ++ +Q+ 
Sbjct: 81  ALKAFDIFQKCSSSPLKS--VTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNH 138

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           ++ MY KCG L  AR + +   + N VSW SMI G++R G    A++L+ +M       D
Sbjct: 139 ILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPD 198

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
            FT+ S++   +   D   A+ +H+ ++K+ F       NALI MY K   +  A  VF+
Sbjct: 199 HFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFS 258

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC-PDHVVVSSILSACAELTVLE 454
            +  KD+ISW S+I G +  G   EAL +F +M    +  P+  V  S  SAC++L   +
Sbjct: 259 RIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPD 318

Query: 455 FGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCA 514
            G+Q+H + +K G  S L    SL  +YAKCG +  A  VF  +   D++ W A+I G A
Sbjct: 319 CGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFA 378

Query: 515 QNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPG- 573
                KE+  F+ QM   G  P+ +T + LL ACS   +  +           Y +K G 
Sbjct: 379 SVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHS-----YIVKMGF 433

Query: 574 -PDHYAC--MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAAN 630
             D   C  ++ +  +   L +A  + + +  + D   W  LL+AC       L +  A 
Sbjct: 434 NLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTAC-------LQQNQAG 486

Query: 631 NLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFI 690
            +  L  +          M+++  K +       L+ S  I         E  SQ+H FI
Sbjct: 487 EVLRLTKL----------MFASRIKPDHVTLTNVLVSSGQIAS------YEVGSQIHCFI 530



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/182 (21%), Positives = 79/182 (43%), Gaps = 41/182 (22%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           ++ AL++ ++  G ++ A ++F+ + + D  +W+++I  YA +G  +             
Sbjct: 541 VSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGK------------- 587

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH- 156
                             EAFELF  M+  G +P++ T   +L  CS  G+++ G + + 
Sbjct: 588 ------------------EAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYR 629

Query: 157 ----GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
                Y I    +      + +VD+ A+  C+  AE   +  P   + V W T++     
Sbjct: 630 TMQEDYRISPTKEH----CSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKV 685

Query: 213 NG 214
           +G
Sbjct: 686 HG 687


>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
 gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 256/737 (34%), Positives = 408/737 (55%), Gaps = 4/737 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +++ +   G +  A  +F     ++ F+W+ L+ GY+  G   EA  L+ ++   G R
Sbjct: 73  NALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIR 132

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  YT  +VLR C+    L RG + H + ++  FD++  VV  L+ MY KC  +  A  L
Sbjct: 133 PDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARML 192

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P  ++ ++W  MI+GY +N    + +E F  MR   ++ +  T  S+++AC  +  
Sbjct: 193 FDKMPT-RDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGD 251

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              G Q+H  ++ + ++ N+ V ++LI MY   G    A  +    E  + VSW ++I G
Sbjct: 252 ERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISG 311

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
                   +AL  +K M       D+ T  SVL+  AS   L+    +H L  +TG   Y
Sbjct: 312 CVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILY 371

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
             V N+LIDMY+K   ++ A  +F+ + DKDVISWTS+I G   +    EAL +F  M +
Sbjct: 372 VVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMIL 431

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
               P+ V + S LSACA +  L  G+++HA  LK+G      + N+++ +Y +CG +  
Sbjct: 432 KSK-PNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRT 490

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           A   F+ ++ +DV  W  L+ G AQ GKG   ++ + +M+     PD +TF+ LL ACS 
Sbjct: 491 ALNQFN-LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSR 549

Query: 551 AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
           +G+      YF+ M   Y I P   HYAC++DLLGR+GKL EA   +++M  +PD  +W 
Sbjct: 550 SGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWG 609

Query: 611 ALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRG 670
           ALL+ACR+H  + LGE AA ++F+ +  +   Y+ L N+Y+ +GKW++ A+VR+ MK  G
Sbjct: 610 ALLNACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEG 669

Query: 671 IRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVE 730
           +  +PGCSWVE   +VH F+S D  HP   +I   ++     +K +G+      ++  ++
Sbjct: 670 LIVDPGCSWVEVKGKVHAFLSGDNFHPQMQEINVVLEGFYEKMKTSGFNGQECSSMDGIQ 729

Query: 731 EEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILR 790
               +I    HSE+ A+A+ L+    G PI + KNL +C  CH+ +K+IS +  R I +R
Sbjct: 730 TSKADI-FCGHSERQAIAYSLINSAPGMPIWVTKNLYMCQSCHSTVKFISKIVRREISVR 788

Query: 791 DSNRFHHFKAGNCSCGD 807
           D+ +FHHFK G CSCGD
Sbjct: 789 DTEQFHHFKDGLCSCGD 805



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 147/481 (30%), Positives = 250/481 (51%), Gaps = 12/481 (2%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV-TGLVDMYAKCKCIFEAEYLFKMFPDG 197
           ++RLC  K     GE      + +   L +  +   L+ M+ +   +  A  +F    + 
Sbjct: 39  LIRLCENKRGYSEGEYVWKAVLSSLVTLLSVRLGNALLSMFVRFGDVGNAWNVFGRMGE- 97

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           ++  +W  ++ GY++ G+  +A+  +  +   G+  + +TFPS+L +CA       G +V
Sbjct: 98  RDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREV 157

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           H  ++   F+ +V V +ALI MY KCGD+ SAR L +     + +SWN+MI G+      
Sbjct: 158 HAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDEC 217

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
            E L LF +M    I  D  T  SV++      D      +HS +V+T ++G   V N+L
Sbjct: 218 LEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSL 277

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           I MY   G+   A  VF+ M+ +DV+SWT++I+GC  +   ++AL+ +  M I+G  PD 
Sbjct: 278 IQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDE 337

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
           V ++S+LSACA L  L+ G ++H +  ++G    + V NSL+ +Y+KC  I  A  +F  
Sbjct: 338 VTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQ 397

Query: 498 MHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENA 557
           +  +DVI+WT++I G   N +  EAL F+ +M+ + +KP+ +T +  L AC+  G     
Sbjct: 398 IPDKDVISWTSVINGLRINNRCFEALIFFRKMILK-SKPNSVTLISALSACARVGALMCG 456

Query: 558 RWYFESMDKVYGIKPGPDHYA--CMIDLLGRSGKLIEAKALLDQM-VGEPDATVWKALLS 614
           +   E          G D +    ++DL  R G++   +  L+Q  + E D   W  LL+
Sbjct: 457 K---EIHAHALKAGMGFDGFLPNAILDLYVRCGRM---RTALNQFNLNEKDVGAWNILLT 510

Query: 615 A 615
            
Sbjct: 511 G 511



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 139/460 (30%), Positives = 225/460 (48%), Gaps = 21/460 (4%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D    N +I  Y   G +  A+ LF++ P ++  +W+++I GY      +E  ELF++
Sbjct: 167 DMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFR 226

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+     P   T+ +V+  C L G  + G Q H Y ++T +D N  V   L+ MY     
Sbjct: 227 MRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGH 286

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
             EAE +F    + ++ V+WTT+I+G   N    KA+E ++ M + G   ++ T  S+L+
Sbjct: 287 WKEAESVFSGM-ECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLS 345

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           ACA++   D G ++H     +G    V V ++LIDMY+KC  ++ A  +       + +S
Sbjct: 346 ACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVIS 405

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           W S+I G        EAL  F+KM  +  K +  T  S L+  A    L   K +H+  +
Sbjct: 406 WTSVINGLRINNRCFEALIFFRKMILKS-KPNSVTLISALSACARVGALMCGKEIHAHAL 464

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K G     F+ NA++D+Y + G +  A   FNL  +KDV +W  L+TG A  G     ++
Sbjct: 465 KAGMGFDGFLPNAILDLYVRCGRMRTALNQFNL-NEKDVGAWNILLTGYAQKGKGAMVME 523

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTV----LEFGQQVHAVF-----LKSGGCSSLSV 474
            F  M  S I PD V   S+L AC+   +    LE+ Q++   +     LK   C     
Sbjct: 524 LFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYAC----- 578

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
              +V +  + G +N+A+   + M  + D   W AL+  C
Sbjct: 579 ---VVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNAC 615



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 176/349 (50%), Gaps = 5/349 (1%)

Query: 69  TWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG 128
            +N++I  Y + G  +EA+ +F+    ++  +W+++I G  +  L  +A E +  M++ G
Sbjct: 273 VYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITG 332

Query: 129 YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
             P + T+ +VL  C+  G L  G + H  A +T   L   V   L+DMY+KCK I +A 
Sbjct: 333 TMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKAL 392

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
            +F   PD K+ ++WT++I G   N   F+A+  FR M ++  + N  T  S L+ACA V
Sbjct: 393 EIFHQIPD-KDVISWTSVINGLRINNRCFEALIFFRKMILKS-KPNSVTLISALSACARV 450

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
            A   G ++H   L +G   + ++ +A++D+Y +CG + +A      +E D   +WN ++
Sbjct: 451 GALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFNLNEKDVG-AWNILL 509

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTGF 367
            G+A++G     + LFK+M   +I  DD T+ S+L  C  S +     +    + V    
Sbjct: 510 TGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHI 569

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYH 415
                    ++D+  + G L+ A      M  K D   W +L+  C  H
Sbjct: 570 TPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIH 618


>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
          Length = 617

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 263/614 (42%), Positives = 376/614 (61%), Gaps = 2/614 (0%)

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           +N V+WTT+++G SQN     A+  F  MR  GV   +F   S   A AA+ A   GAQ+
Sbjct: 4   RNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQL 63

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           H   +  GF+  ++V S L DMY+KCG L  A R+ +     + V+W +MI G+A+ G  
Sbjct: 64  HCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSL 123

Query: 318 KEALSLFKKMHARD-IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
           + A+  F+ M     +  D   + SVL+      D   +KS+H  + K GFE    V NA
Sbjct: 124 EAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNA 183

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
           LIDMYAK  +++ A  V  +     +V+S TS+I G       EEAL  + ++R  G+ P
Sbjct: 184 LIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEP 243

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           +    SS++  CA   +LE G Q+HA  +K+       V ++LV +Y KCG I+ + ++F
Sbjct: 244 NEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLF 303

Query: 496 DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAE 555
           + +  R  I W A+I   AQ+G G+EA+Q +D+M+  G +P++I FV LL ACSHAGL +
Sbjct: 304 NEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVD 363

Query: 556 NARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
               YF SM + +GI+P  +HY+C+ID  GR+G+L EA   + +M  +P+A  W +LL A
Sbjct: 364 EGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGA 423

Query: 616 CRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEP 675
           CR+ G  ELGE AA NL +LEP N   +V LS +Y++ G+WED   VRKLM+   I+K P
Sbjct: 424 CRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLP 483

Query: 676 GCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKE 735
           G SWV++N + H+F SED  HP + DIY K++E+   IKE GY+PD +F   N+E+  KE
Sbjct: 484 GFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKE 543

Query: 736 IGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRF 795
             L YHSE++AVAF L+++P   PI + KNLR+C DCHTA K+I  V  R II+RD++RF
Sbjct: 544 RILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRF 603

Query: 796 HHFKAGNCSCGDYW 809
           HHF  G CSCGDYW
Sbjct: 604 HHFVNGRCSCGDYW 617



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 135/431 (31%), Positives = 226/431 (52%), Gaps = 11/431 (2%)

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE 153
           P +N  +W++L+ G S   +  +A   F  M+  G  P+++ L +  R  +  G    G 
Sbjct: 2   PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGA 61

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQN 213
           Q H   ++  FD   FV + L DMY+KC  + EA  +F   P  K+ VAWT MI GY++N
Sbjct: 62  QLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQ-KDAVAWTAMIDGYAKN 120

Query: 214 GYGFKAIECFRDMRVEG-VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYV 272
           G    A+  FRDM+ EG V ++Q  F S+L+A   +        +H C+  +GFE  V V
Sbjct: 121 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAV 180

Query: 273 QSALIDMYAKCGDLDSARRLLEYSEID----NEVSWNSMIVGFARQGFHKEALSLFKKMH 328
           ++ALIDMYAK  D++SA R+L   +ID    N VS  SMI G+      +EAL ++ ++ 
Sbjct: 181 RNALIDMYAKSMDVESASRVL---KIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELR 237

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD 388
            + ++ ++FT+ S++   A    L     +H+ ++KT      FV + L+DMY K G + 
Sbjct: 238 RQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLIS 297

Query: 389 CAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
            +  +FN ++ +  I+W ++I   A HG   EA++ F  M  SGI P+H+   S+L+AC+
Sbjct: 298 LSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACS 357

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL-VYAKCGCINDANRVFDSMHTR-DVITW 506
              +++ G +      ++ G        S ++  Y + G +++A +    M  + +   W
Sbjct: 358 HAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGW 417

Query: 507 TALIMGCAQNG 517
            +L+  C   G
Sbjct: 418 CSLLGACRMRG 428



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 183/362 (50%), Gaps = 9/362 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D + F  + +   Y+  G L EA ++F++ P K+   W+++I GY+  G    A   F  
Sbjct: 73  DTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRD 132

Query: 124 MQLEGYRPS-QYTLDNVLRLCSLKGLLQRG---EQFHGYAIKTCFDLNAFVVTGLVDMYA 179
           M+ EG   + Q+   +VL   S  G L+ G   +  H    K  F+L   V   L+DMYA
Sbjct: 133 MKREGLVGADQHVFCSVL---SASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYA 189

Query: 180 KCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFP 239
           K   +  A  + K+ P G N V+ T+MI GY +     +A+  + ++R +GVE N+FTF 
Sbjct: 190 KSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFS 249

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
           S++  CA  +  + GAQ+H  ++ +    + +V S L+DMY KCG +  + +L    E  
Sbjct: 250 SMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYR 309

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSV 358
            +++WN++I  FA+ G  +EA+  F +M    I+ +   + S+L  C  + +     K  
Sbjct: 310 TDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYF 369

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGS 417
           +S+    G E  +   + +ID Y + G LD A+   + M  K +   W SL+  C   GS
Sbjct: 370 YSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGS 429

Query: 418 YE 419
            E
Sbjct: 430 KE 431



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 80/137 (58%)

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
           M  ++ +SWT+L++G + +  + +AL  F+ MR +G+ P    +SS   A A L     G
Sbjct: 1   MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
            Q+H V ++ G  + L V ++L  +Y+KCG +++A RVFD M  +D + WTA+I G A+N
Sbjct: 61  AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 120

Query: 517 GKGKEALQFYDQMLARG 533
           G  + A+  +  M   G
Sbjct: 121 GSLEAAVLSFRDMKREG 137



 Score = 41.6 bits (96), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 6/120 (5%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK---- 96
            LVD +   G I  + QLF ++  R    WN +I  +A  G  REA + F+   +     
Sbjct: 285 TLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRP 344

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
           N   + SL+   S+ GL  E  + F+ M +  G  P +     ++      G L    +F
Sbjct: 345 NHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKF 404


>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 660

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 259/658 (39%), Positives = 382/658 (58%), Gaps = 36/658 (5%)

Query: 153 EQFHGYAIKTCF-DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYS 211
           ++ HG  +   +   N  V   L+ +YA C     A ++F    D KN V +  MI  Y 
Sbjct: 38  KKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITD-KNVVFFNVMIRSYV 96

Query: 212 QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVY 271
            N     A+  ++ M  +G   + +T+P +L A +   +   G Q+HG +L  G + N+Y
Sbjct: 97  NNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLY 156

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD 331
           V + LI MY KC  L  A+++L+     + VSWNSM+  +A+ G   +AL L ++M A +
Sbjct: 157 VGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALN 216

Query: 332 IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
           +K +D T  S+L        + N  S + L VK              +M+ K        
Sbjct: 217 LKPNDCTMASLLPA------VTNTTSDNVLYVK--------------EMFLK-------- 248

Query: 392 MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELT 451
                +  K VISW  +I     +   +EA+  +S M  +G+ PD V + S+L A  +L+
Sbjct: 249 -----LTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLS 303

Query: 452 VLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIM 511
            L  G++VH    +     +L ++N+L+ +YAKCGC+ DA  VF+ M  RDV++WT++I 
Sbjct: 304 ALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIIS 363

Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIK 571
              + G+G++A+  + +M   G  PD I FV +L ACSHAGL ++ R+YF  M +  GI 
Sbjct: 364 AYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAEC-GIT 422

Query: 572 PGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANN 631
           P  +H+AC++DLLGR+GK+ EA   + QM  EPD  VW  LLSACRV+ ++ +G  AA+ 
Sbjct: 423 PKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADK 482

Query: 632 LFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFIS 691
           L  L P ++  YV LSN+Y+ AG+W D A +R +M+ +GI+K PG S VE N  VH F++
Sbjct: 483 LLMLNPEHSGYYVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNVELNDGVHTFLA 542

Query: 692 EDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGL 751
            D  HP    IY ++D ++  +KE GY+P+ + ALH+VEEE KE  LA HSEKLAVAF +
Sbjct: 543 GDHSHPQSKKIYEELDVLVGKMKELGYMPETDSALHDVEEEDKEYHLAVHSEKLAVAFAI 602

Query: 752 LTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +    G PIR+ KNLRVCGDCH A K IS +  R II+RD++RFHHF+ G CSCGDYW
Sbjct: 603 INTKPGTPIRVTKNLRVCGDCHVAAKLISKIAEREIIIRDTHRFHHFQEGCCSCGDYW 660



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 133/469 (28%), Positives = 215/469 (45%), Gaps = 40/469 (8%)

Query: 51  EIDEAGQLFEKMSDRDGFTWNT-----MIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +I+   +L  K+ +     WN      ++  YA  G    A+ +F+E   KN   ++ +I
Sbjct: 33  DINTLKKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMI 92

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
             Y N  L  +A  ++  M  +G+ P  YT   VL+  S    L  G Q HG  +K   D
Sbjct: 93  RSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLD 152

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
           LN +V  GL+ MY KCK + EA+ +    P  ++ V+W +M++ Y+QNG    A+E  R+
Sbjct: 153 LNLYVGNGLIAMYGKCKSLKEAQQVLDEIP-CRDVVSWNSMVSVYAQNGRFNDALELCRE 211

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M    ++ N  T  S+L A    ++ +                 +YV+   + +  K   
Sbjct: 212 MEALNLKPNDCTMASLLPAVTNTTSDNV----------------LYVKEMFLKLTKK--- 252

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
                         + +SWN MI  +      KEA+ L+ +M A  ++ D  +  SVL  
Sbjct: 253 --------------SVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPA 298

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
           +     L+  + VH    +        + NALIDMYAK G L  A  VFN MQ +DV+SW
Sbjct: 299 YGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSW 358

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
           TS+I+     G   +A+  F++MR SG+ PD +   S+L+AC+   +L+ G+    +  +
Sbjct: 359 TSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAE 418

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
            G    L     +V +  + G I++A      M    D   W  L+  C
Sbjct: 419 CGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSAC 467



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 3/154 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +I  YA  G LR+A+ +FN+  F++  +W+S+I  Y   G   +A  +F +M+  G  
Sbjct: 328 NALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLN 387

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P      +VL  CS  GLL  G  +     +            +VD+  +   I EA   
Sbjct: 388 PDSIAFVSVLAACSHAGLLDDGRYYFNLMAECGITPKLEHFACVVDLLGRAGKIDEAYGF 447

Query: 191 FKMFPDGKNHVAWTTMITG---YSQNGYGFKAIE 221
            +  P   +   W  +++    YS    G  A +
Sbjct: 448 IRQMPLEPDERVWGPLLSACRVYSNMNIGILAAD 481


>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial [Vitis vinifera]
          Length = 676

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 266/745 (35%), Positives = 416/745 (55%), Gaps = 83/745 (11%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS-NYGLDIEAFELFWQMQL 126
           F++ +MI  +  + R+ EA+ +F++  F + + ++ +I GY+ NY  D  A +LF++M +
Sbjct: 12  FSYQSMITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFD-HALQLFYEMPV 70

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
           +          +V+   S+              IK CFD               C  +  
Sbjct: 71  K----------DVVSWNSM--------------IKGCFD---------------CADLTM 91

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A  LF   P+ ++ V+WTTMI G+ Q G            ++E  E   +  P       
Sbjct: 92  ARKLFDEMPE-RSVVSWTTMINGFLQFG------------KIEVAEGLFYKMP------- 131

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
               RD  A                  +++I  Y   G ++   RL +     N +SW S
Sbjct: 132 ---FRDIAAW-----------------NSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTS 171

Query: 307 MIVGFARQGFHKEALSLFKKMHA--RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           MI G  + G  +EAL LF++M     ++K    TY  V+   A+   L     +H+ + K
Sbjct: 172 MIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFK 231

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            G+    +++ ALI  YA    ++ +  VF+     +V+ WT+L+TG   +  +E+ALK 
Sbjct: 232 LGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKV 291

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           F +M   G+ P+    +S L++C  L  L++G+++H   +K G  + + V NSL+++Y +
Sbjct: 292 FGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYR 351

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG +ND   +F  +  +++++W ++I+GCAQ+G G  AL F++QM+    +PD ITF GL
Sbjct: 352 CGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGL 411

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L ACSH+G+++  R  F+   +    +   DHYACM+D+LGRSGKL EA+ L+  M  + 
Sbjct: 412 LSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKA 471

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
           ++ VW  LLSAC +H  LE+ ERAA  + +LEP  +  YV LSN+Y++A +W D +R+R+
Sbjct: 472 NSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRR 531

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
            MK RGI K+PG SW+      + F+S DR HP    IY K++ +   +KE GYVPD  F
Sbjct: 532 EMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRF 591

Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
           ALH+VE+E KE+ L+YHSE+LA+ FGL++  +G+ I + KNLRVCGDCH+A+K I+ +  
Sbjct: 592 ALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVR 651

Query: 785 RHIILRDSNRFHHFKAGNCSCGDYW 809
           R II+RDS RFHHF  G CSCGDYW
Sbjct: 652 RKIIVRDSTRFHHFMDGRCSCGDYW 676



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 240/484 (49%), Gaps = 21/484 (4%)

Query: 43  LVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWS 102
           + D   +  IDEA  +F+K+S  D + +  MI  YA + R   A +LF E P K+  +W+
Sbjct: 18  ITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWN 77

Query: 103 SLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG--EQFHGYAI 160
           S+I G  +      A +LF +M  E    S  T+ N        G LQ G  E   G   
Sbjct: 78  SMIKGCFDCADLTMARKLFDEMP-ERSVVSWTTMIN--------GFLQFGKIEVAEGLFY 128

Query: 161 KTCF-DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           K  F D+ A+    ++  Y     + +   LF+  P  +N ++WT+MI G  Q+G   +A
Sbjct: 129 KMPFRDIAAW--NSMIYGYCCNGRVEDGLRLFQEMP-CRNVISWTSMIGGLDQHGRSEEA 185

Query: 220 IECFRDMRVEGVE--SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           +  FR M   GVE      T+  ++TACA  SA   G Q+H  +   G+  + Y+ +ALI
Sbjct: 186 LGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALI 245

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
             YA C  ++ + R+       N V W +++ G+     H++AL +F +M    +  +  
Sbjct: 246 TFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQS 305

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           ++ S LN       L+  + +H+  VK G E   FV N+LI MY + GNL+   ++F  +
Sbjct: 306 SFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRI 365

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
             K+++SW S+I GCA HG    AL +F+ M  S + PD +  + +LSAC+   + + G+
Sbjct: 366 SKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGR 425

Query: 458 QVHAVFLKSGGCSSLSVDN--SLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCA 514
            +   F ++   + + +D+   +V +  + G + +A  +  +M  + + + W  L+  C 
Sbjct: 426 CLFKYFSENKS-AEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACT 484

Query: 515 QNGK 518
            + K
Sbjct: 485 MHSK 488



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 194/383 (50%), Gaps = 11/383 (2%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           F   G+I+ A  LF KM  RD   WN+MI  Y  +GR+ +  +LF E P +N  +W+S+I
Sbjct: 114 FLQFGKIEVAEGLFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMI 173

Query: 106 YGYSNYGLDIEAFELFWQMQLEG--YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC 163
            G   +G   EA  LF QM   G   +P+  T   V+  C+    L +G Q H +  K  
Sbjct: 174 GGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLG 233

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNH---VAWTTMITGYSQNGYGFKAI 220
           +  +A++   L+  YA CK + ++  +F     GK H   V WT ++TGY  N     A+
Sbjct: 234 YSFDAYISAALITFYANCKQMEDSLRVFH----GKLHMNVVIWTALVTGYGLNCKHEDAL 289

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
           + F +M  EGV  NQ +F S L +C  + A D+G ++H   +  G E +V+V ++LI MY
Sbjct: 290 KVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMY 349

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
            +CG+L+    + +     N VSWNS+IVG A+ G    AL+ F +M    ++ D+ T+ 
Sbjct: 350 YRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFT 409

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA-LIDMYAKQGNLDCA-FMVFNLMQ 398
            +L+  + +      + +     +      K  + A ++D+  + G L+ A  ++ N+  
Sbjct: 410 GLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPV 469

Query: 399 DKDVISWTSLITGCAYHGSYEEA 421
             + + W  L++ C  H   E A
Sbjct: 470 KANSMVWLVLLSACTMHSKLEVA 492


>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 257/643 (39%), Positives = 369/643 (57%), Gaps = 38/643 (5%)

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR- 227
           F+ T LV++YA    +  +   F   P  K+  AW +MI+ Y  NG+  +AI CF  +  
Sbjct: 52  FISTRLVNLYANLGDVSLSRCTFDQIPQ-KDVYAWNSMISAYVHNGHFHEAIGCFYQLLL 110

Query: 228 VEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLD 287
           V  +  + +TFP +L AC  +     G ++H      GF+ NV+V ++LI MY++ G   
Sbjct: 111 VSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTG 167

Query: 288 SARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFA 347
            AR L +     +  SWN+MI G  + G   +AL +  +M    IK++  T  S+L  F 
Sbjct: 168 IARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVF- 226

Query: 348 SNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTS 407
                                         +DMYAK G LD A  VF ++  KDVISW +
Sbjct: 227 ------------------------------VDMYAKLGLLDSAHKVFEIIPVKDVISWNT 256

Query: 408 LITGCAYHGSYEEALKYFSDMR-ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
           LITG A +G   EA++ +  M     I P+     SIL A A +  L+ G ++H   +K+
Sbjct: 257 LITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKT 316

Query: 467 GGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFY 526
                + V   L+ VY KCG + DA  +F  +     +TW A+I     +G  ++ L+ +
Sbjct: 317 NLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLF 376

Query: 527 DQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGR 586
            +ML  G KPD++TFV LL ACSH+G  E  +W F  M + YGIKP   HY CM+DLLGR
Sbjct: 377 GEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVDLLGR 435

Query: 587 SGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQL 646
           +G L  A   +  M  +PDA++W ALL ACR+HG++ELG+ A++ LFE++  N   YV L
Sbjct: 436 AGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLL 495

Query: 647 SNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKI 706
           SN+Y+  GKWE   +VR L + RG++K PG S +E N +V +F + ++ HP   +IY ++
Sbjct: 496 SNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEEL 555

Query: 707 DEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNL 766
             +   +K  GY+PD +F L +VEE+ KE  L  HSE+LA+AFG+++ P  +PIRIFKNL
Sbjct: 556 RVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNL 615

Query: 767 RVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           RVCGDCH A K+IS +  R I++RDSNRFHHFK G CSCGDYW
Sbjct: 616 RVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 658



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 135/453 (29%), Positives = 213/453 (47%), Gaps = 38/453 (8%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL- 126
           F    ++  YAN G +  ++  F++ P K+ + W+S+I  Y + G   EA   F+Q+ L 
Sbjct: 52  FISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLV 111

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
              RP  YT   VL+ C   G L  G + H +A K  F  N FV   L+ MY++      
Sbjct: 112 SEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGI 168

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A  LF   P  ++  +W  MI+G  QNG   +A++   +MR+EG++ N  T  SIL    
Sbjct: 169 ARSLFDDMP-FRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSIL---- 223

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
                                         +DMYAK G LDSA ++ E   + + +SWN+
Sbjct: 224 ---------------------------PVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNT 256

Query: 307 MIVGFARQGFHKEALSLFKKM-HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +I G+A+ G   EA+ ++K M   ++I  +  T+ S+L  +A    L     +H  ++KT
Sbjct: 257 LITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKT 316

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
                 FV   LID+Y K G L  A  +F  +  +  ++W ++I+    HG  E+ LK F
Sbjct: 317 NLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLF 376

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
            +M   G+ PDHV   S+LSAC+    +E G+    +  + G   SL     +V +  + 
Sbjct: 377 GEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRA 436

Query: 486 GCINDANRVFDSMHTR-DVITWTALIMGCAQNG 517
           G +  A      M  + D   W AL+  C  +G
Sbjct: 437 GYLEMAYDFIKDMPLQPDASIWGALLGACRIHG 469



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 209/434 (48%), Gaps = 48/434 (11%)

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
           F   +H  ++ +G   ++++ + L+++YA  GD+  +R   +     +  +WNSMI  + 
Sbjct: 34  FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYV 93

Query: 313 RQGFHKEALSLFKK-MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
             G   EA+  F + +   +I+ D +T+P VL    + +D    + +H    K GF+   
Sbjct: 94  HNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNV 150

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
           FV  +LI MY++ G    A  +F+ M  +D+ SW ++I+G   +G+  +AL    +MR+ 
Sbjct: 151 FVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 210

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
           GI  + V V SIL    ++                               YAK G ++ A
Sbjct: 211 GIKMNFVTVVSILPVFVDM-------------------------------YAKLGLLDSA 239

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM-LARGTKPDYITFVGLLFACSH 550
           ++VF+ +  +DVI+W  LI G AQNG   EA++ Y  M   +   P+  T+V +L A +H
Sbjct: 240 HKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAH 299

Query: 551 AGLAENARWYFESMDKVYGIKPGPDHY--ACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
            G  +      +   +V       D +   C+ID+ G+ G+L++A +L  Q+  E   T 
Sbjct: 300 VGALQQG---MKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVT- 355

Query: 609 WKALLSACRVHGDLELGERAANNLFE--LEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
           W A++S   +HG  E   +    + +  ++P + + +V L +  S +G  E+     +LM
Sbjct: 356 WNAIISCHGIHGHAEKTLKLFGEMLDEGVKP-DHVTFVSLLSACSHSGFVEEGKWCFRLM 414

Query: 667 KSRGIR---KEPGC 677
           +  GI+   K  GC
Sbjct: 415 QEYGIKPSLKHYGC 428



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 180/368 (48%), Gaps = 40/368 (10%)

Query: 67  GFTWNTMIAA-----YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELF 121
           GF WN  +AA     Y+  G    A+ LF++ PF++  +W+++I G    G   +A ++ 
Sbjct: 145 GFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVL 204

Query: 122 WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
            +M+LEG + +  T+ ++L +                                VDMYAK 
Sbjct: 205 DEMRLEGIKMNFVTVVSILPV-------------------------------FVDMYAKL 233

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPS 240
             +  A  +F++ P  K+ ++W T+ITGY+QNG   +AIE ++ M   + +  NQ T+ S
Sbjct: 234 GLLDSAHKVFEIIPV-KDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVS 292

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           IL A A V A   G ++HG ++ +    +V+V + LID+Y KCG L  A  L      ++
Sbjct: 293 ILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQES 352

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
            V+WN++I      G  ++ L LF +M    +K D  T+ S+L+  + +  +   K    
Sbjct: 353 SVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFR 412

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYE 419
           L+ + G +        ++D+  + G L+ A+  + ++    D   W +L+  C  HG+ E
Sbjct: 413 LMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIE 472

Query: 420 EALKYFSD 427
              K+ SD
Sbjct: 473 LG-KFASD 479



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 157/324 (48%), Gaps = 18/324 (5%)

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
           F S+     AK +H+L+V  G     F++  L+++YA  G++  +   F+ +  KDV +W
Sbjct: 26  FDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAW 85

Query: 406 TSLITGCAYHGSYEEALK-YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
            S+I+   ++G + EA+  ++  + +S I PD      +L AC  L     G+++H    
Sbjct: 86  NSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAF 142

Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ 524
           K G   ++ V  SL+ +Y++ G    A  +FD M  RD+ +W A+I G  QNG   +AL 
Sbjct: 143 KLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALD 202

Query: 525 FYDQMLARGTKPDYITFVGLL--FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMID 582
             D+M   G K +++T V +L  F   +A L        +S  KV+ I P  D  +    
Sbjct: 203 VLDEMRLEGIKMNFVTVVSILPVFVDMYAKLG-----LLDSAHKVFEIIPVKDVISWNTL 257

Query: 583 LLGRSGKLIEAKAL-LDQMVGE-----PDATVWKALLSACRVHGDLELGERAANNLFELE 636
           + G +   + ++A+ + +M+ E     P+   W ++L A    G L+ G +    + +  
Sbjct: 258 ITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTN 317

Query: 637 -PMNAMPYVQLSNMYSTAGKWEDA 659
             ++      L ++Y   G+  DA
Sbjct: 318 LHLDVFVATCLIDVYGKCGRLVDA 341



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 125/268 (46%), Gaps = 31/268 (11%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++  G +D A ++FE +  +D  +WNT+I  YA +G   EA                   
Sbjct: 230 YAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEA------------------- 270

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                    IE +++    + +   P+Q T  ++L   +  G LQ+G + HG  IKT   
Sbjct: 271 ---------IEVYKMM--EECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLH 319

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
           L+ FV T L+D+Y KC  + +A  LF   P  ++ V W  +I+ +  +G+  K ++ F +
Sbjct: 320 LDVFVATCLIDVYGKCGRLVDAMSLFYQVPQ-ESSVTWNAIISCHGIHGHAEKTLKLFGE 378

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M  EGV+ +  TF S+L+AC+     + G      +   G + ++     ++D+  + G 
Sbjct: 379 MLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGY 438

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           L+ A   ++   +  + S    ++G  R
Sbjct: 439 LEMAYDFIKDMPLQPDASIWGALLGACR 466


>gi|356562121|ref|XP_003549322.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 921

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 274/805 (34%), Positives = 426/805 (52%), Gaps = 116/805 (14%)

Query: 39  LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF--K 96
           LN  L  +SN G +D+A ++F + +  + FTWNTM+ A+ +SGR+REA+ LF+E P   +
Sbjct: 42  LNNLLHVYSNCGMVDDAFRVFREANHANIFTWNTMLHAFFDSGRMREAENLFDEMPLIVR 101

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQM------QLEGYRPSQYTLDNVLRLCSLKGLLQ 150
           +  +W+++I GY   GL   + + F  M       ++   P  YT    ++ C      +
Sbjct: 102 DSVSWTTMISGYCQNGLPGHSIKTFMSMLRDSNHDIQNCDPFSYTC--TMKACGCLASTR 159

Query: 151 RGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI-------------------------- 184
              Q H + IK        +   LVDMY KC  I                          
Sbjct: 160 LALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETIFLNIESPSLFCWNSMIYGYS 219

Query: 185 -----FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFP 239
                +EA ++F   P+ ++HV+W T+I+ +SQ G+G + +  F +M   G + N  T+ 
Sbjct: 220 QLYGPYEALHVFTRMPE-RDHVSWNTLISVFSQYGHGIRCLSTFVEMCNLGFKPNFMTYG 278

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
           S+L+ACA++S   +GA +H  IL      + ++ S LIDMYAKCG L  ARR+       
Sbjct: 279 SVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSLGEQ 338

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           N+VSW   I G A+ G   +AL+LF +M    + +D+FT  ++L   +      + + +H
Sbjct: 339 NQVSWTCFISGVAQFGLGDDALALFNQMRQASVVLDEFTLATILGVCSGQNYAASGELLH 398

Query: 360 SLIVKTGFEGYKFVNNALIDMYAK-------------------------------QGNLD 388
              +K+G +    V NA+I MYA+                                G++D
Sbjct: 399 GYAIKSGMDSSVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGDID 458

Query: 389 CAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
            A   F++M +++VI+W S+++    HG  EE +K +  MR   + PD V  ++ + ACA
Sbjct: 459 RARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACA 518

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
           +L  ++ G QV +   K G  S +SV NS+V +Y++CG I +A +VFDS+H +++I+W A
Sbjct: 519 DLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVKNLISWNA 578

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
           ++   AQNG G +A++ Y+ ML    KPD+I++V +L                       
Sbjct: 579 MMAAFAQNGLGNKAIETYEAMLRTECKPDHISYVAVL----------------------- 615

Query: 569 GIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
                        DLLGR+G L +AK L+D M  +P+ATVW ALL ACR+H D  L E A
Sbjct: 616 ------------SDLLGRAGLLNQAKNLIDGMPFKPNATVWGALLGACRIHHDSILAETA 663

Query: 629 ANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHI 688
           A  L EL   ++  YV L+N+Y+ +G+ E+ A +RKLMK +GIRK PGCSW+E +++VH+
Sbjct: 664 AKKLMELNVEDSGGYVLLANIYAESGELENVADMRKLMKVKGIRKSPGCSWIEVDNRVHV 723

Query: 689 FISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVA 748
           F  ++  HP    +Y K++E+M  I++ G    +    H  ++        YHSEKLA A
Sbjct: 724 FTVDETSHPQINKVYVKLEEMMKKIEDTGRYVSIVSCAHRSQK--------YHSEKLAFA 775

Query: 749 FGLLTLPQGAPIRIFKNLRVCGDCH 773
           FGLL+LP   PI++ KNLRVC DCH
Sbjct: 776 FGLLSLPPWMPIQVTKNLRVCNDCH 800



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 124/498 (24%), Positives = 217/498 (43%), Gaps = 87/498 (17%)

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           ++H  ++ SG +A++++ + L+ +Y+ CG +D A R+   +   N  +WN+M+  F   G
Sbjct: 25  KLHAQLILSGLDASLFLLNNLLHVYSNCGMVDDAFRVFREANHANIFTWNTMLHAFFDSG 84

Query: 316 FHKEALSLFKKM------------------------HA------------RDIK-IDDFT 338
             +EA +LF +M                        H+             DI+  D F+
Sbjct: 85  RMREAENLFDEMPLIVRDSVSWTTMISGYCQNGLPGHSIKTFMSMLRDSNHDIQNCDPFS 144

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG------------- 385
           Y   +           A  +H+ ++K        + N+L+DMY K G             
Sbjct: 145 YTCTMKACGCLASTRLALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETIFLNIE 204

Query: 386 --NLDC----------------AFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
             +L C                A  VF  M ++D +SW +LI+  + +G     L  F +
Sbjct: 205 SPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCLSTFVE 264

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           M   G  P+ +   S+LSACA ++ L++G  +HA  L+        + + L+ +YAKCGC
Sbjct: 265 MCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGC 324

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           +  A RVF+S+  ++ ++WT  I G AQ G G +AL  ++QM       D  T   +L  
Sbjct: 325 LALARRVFNSLGEQNQVSWTCFISGVAQFGLGDDALALFNQMRQASVVLDEFTLATILGV 384

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYA----CMIDLLGRSGKLIEAKALLDQMVGE 603
           CS    A +       +   Y IK G D        +I +  R G   E  +L  + +  
Sbjct: 385 CSGQNYAASGE-----LLHGYAIKSGMDSSVPVGNAIITMYARCGD-TEKASLAFRSMPL 438

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEP-MNAMPYVQLSNMYSTAGKWEDAARV 662
            D   W A+++A   +GD++     A   F++ P  N + +  + + Y   G  E+  ++
Sbjct: 439 RDTISWTAMITAFSQNGDID----RARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKL 494

Query: 663 RKLMKSRGIRKEPGCSWV 680
             LM+S+ ++ +    WV
Sbjct: 495 YVLMRSKAVKPD----WV 508



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 69/136 (50%), Gaps = 9/136 (6%)

Query: 455 FGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCA 514
             +++HA  + SG  +SL + N+L+ VY+ CG ++DA RVF   +  ++ TW  ++    
Sbjct: 22  IARKLHAQLILSGLDASLFLLNNLLHVYSNCGMVDDAFRVFREANHANIFTWNTMLHAFF 81

Query: 515 QNGKGKEALQFYDQM--LARGTKPDYITFVGLLFACSHAGLAENARWYFESM--DKVYGI 570
            +G+ +EA   +D+M  + R    D +++  ++      GL  ++   F SM  D  + I
Sbjct: 82  DSGRMREAENLFDEMPLIVR----DSVSWTTMISGYCQNGLPGHSIKTFMSMLRDSNHDI 137

Query: 571 KP-GPDHYACMIDLLG 585
           +   P  Y C +   G
Sbjct: 138 QNCDPFSYTCTMKACG 153


>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
 gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 268/723 (37%), Positives = 399/723 (55%), Gaps = 49/723 (6%)

Query: 131 PSQYTLDN--------VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           P+Q T +N        + R  SL+ L    +Q HG+ I+T    + +  + L  M A   
Sbjct: 21  PNQPTTNNERSRHISLIERCVSLRQL----KQTHGHMIRTGTFSDPYSASKLFAM-AALS 75

Query: 183 CIFEAEYLFKMFPD--GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFP 239
                EY  K+F +    N  AW T+I  Y+       +I  F DM  E     N++TFP
Sbjct: 76  SFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFP 135

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
            ++ A A VS+   G  +HG  + S   ++V+V ++LI  Y  CGDLDSA ++    +  
Sbjct: 136 FLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK 195

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           + VSWNSMI GF ++G   +AL LFKKM + D+K    T   VL+  A   +L   + V 
Sbjct: 196 DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVC 255

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
           S I +        + NA++DMY K G+++ A  +F+ M++KD ++WT+++ G A    YE
Sbjct: 256 SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYE 315

Query: 420 -------------------------------EALKYFSDMRIS-GICPDHVVVSSILSAC 447
                                          EAL  F ++++   +  + + + S LSAC
Sbjct: 316 AAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSAC 375

Query: 448 AELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWT 507
           A++  LE G+ +H+   K G   +  V ++L+ +Y+KCG +  +  VF+S+  RDV  W+
Sbjct: 376 AQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWS 435

Query: 508 ALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKV 567
           A+I G A +G G EA+  + +M     KP+ +TF  +  ACSH GL + A   F  M+  
Sbjct: 436 AMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESN 495

Query: 568 YGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGER 627
           YGI P   HYAC++D+LGRSG L +A   ++ M   P  +VW ALL AC++H +L L E 
Sbjct: 496 YGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEM 555

Query: 628 AANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVH 687
           A   L ELEP N   +V LSN+Y+  GKWE+ + +RK M+  G++KEPGCS +E +  +H
Sbjct: 556 ACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIH 615

Query: 688 IFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEG-KEIGLAYHSEKLA 746
            F+S D  HP+   +Y K+ E+M  +K  GY P+++  L  +EEE  KE  L  HSEKLA
Sbjct: 616 EFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLA 675

Query: 747 VAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCG 806
           + +GL++      IR+ KNLRVCGDCH+  K IS +Y R II+RD  RFHHF+ G CSC 
Sbjct: 676 ICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCN 735

Query: 807 DYW 809
           D+W
Sbjct: 736 DFW 738



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 230/475 (48%), Gaps = 36/475 (7%)

Query: 74  IAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGY-RPS 132
           +AA ++   L  A+K+F+E P  N F W++LI  Y++    + +   F  M  E    P+
Sbjct: 71  MAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPN 130

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
           +YT   +++  +    L  G+  HG A+K+    + FV   L+  Y  C  +  A  +F 
Sbjct: 131 KYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFT 190

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
              + K+ V+W +MI G+ Q G   KA+E F+ M  E V+++  T   +L+ACA +   +
Sbjct: 191 TIKE-KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLE 249

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
           FG QV   I  +    N+ + +A++DMY KCG ++ A+RL +  E  + V+W +M+ G+A
Sbjct: 250 FGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYA 309

Query: 313 -------------------------------RQGFHKEALSLFKKMH-ARDIKIDDFTYP 340
                                          + G   EAL +F ++   +++K++  T  
Sbjct: 310 ISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLV 369

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
           S L+  A    L   + +HS I K G      V +ALI MY+K G+L+ +  VFN ++ +
Sbjct: 370 STLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKR 429

Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV- 459
           DV  W+++I G A HG   EA+  F  M+ + + P+ V  +++  AC+   +++  + + 
Sbjct: 430 DVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLF 489

Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT-WTALIMGC 513
           H +    G          +V V  + G +  A +  ++M      + W AL+  C
Sbjct: 490 HQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGAC 544



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 212/451 (47%), Gaps = 45/451 (9%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N++I  Y + G L  A K+F     K+  +W+S+I G+   G   +A ELF +M+
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            E  + S  T+  VL  C+    L+ G Q   Y  +   ++N  +   ++DMY KC  I 
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 284

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYS-------------------------------QNG 214
           +A+ LF    + K++V WTTM+ GY+                               QNG
Sbjct: 285 DAKRLFDAMEE-KDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNG 343

Query: 215 YGFKAIECFRDMRVE-GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
              +A+  F +++++  ++ NQ T  S L+ACA V A + G  +H  I   G   N +V 
Sbjct: 344 KPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVT 403

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
           SALI MY+KCGDL+ +R +    E  +   W++MI G A  G   EA+ +F KM   ++K
Sbjct: 404 SALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVK 463

Query: 334 IDDFTYPSVLNCFASNIDL-NNAKSV-HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
            +  T+ +V  C  S+  L + A+S+ H +    G    +     ++D+  + G L+ A 
Sbjct: 464 PNGVTFTNVF-CACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAV 522

Query: 392 MVFNLMQDKDVIS-WTSLITGCAYHGSYEEALKYFSDMRISGICPD----HVVVSSILSA 446
                M      S W +L+  C  H +    L   +  R+  + P     HV++S+I + 
Sbjct: 523 KFIEAMPIPPSTSVWGALLGACKIHANLN--LAEMACTRLLELEPRNDGAHVLLSNIYAK 580

Query: 447 CAEL-TVLEFGQQVHAVFL-KSGGCSSLSVD 475
             +   V E  + +    L K  GCSS+ +D
Sbjct: 581 LGKWENVSELRKHMRVTGLKKEPGCSSIEID 611



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 139/282 (49%), Gaps = 5/282 (1%)

Query: 31  NSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKL 89
           N V     L  A++D ++  G I++A +LF+ M ++D  TW TM+  YA S     A+++
Sbjct: 261 NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREV 320

Query: 90  FNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGL 148
            N  P K+   W++LI  Y   G   EA  +F ++QL+   + +Q TL + L  C+  G 
Sbjct: 321 LNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGA 380

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
           L+ G   H Y  K    +N  V + L+ MY+KC  + ++  +F    + ++   W+ MI 
Sbjct: 381 LELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV-EKRDVFVWSAMIG 439

Query: 209 GYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV-HGCILSSGFE 267
           G + +G G +A++ F  M+   V+ N  TF ++  AC+     D    + H    + G  
Sbjct: 440 GLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIV 499

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMI 308
                 + ++D+  + G L+ A + +E   I    S W +++
Sbjct: 500 PEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 541


>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 666

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 240/591 (40%), Positives = 366/591 (61%), Gaps = 2/591 (0%)

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
           E    M + G E     + +IL  C +  A   G +VH  ++ + +  +VY+++ LI +Y
Sbjct: 76  EALLQMAILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLY 135

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
            KC  L  AR + +     N VSW +MI  ++++GF  EAL+LF +M   D + + FT+ 
Sbjct: 136 NKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFA 195

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
           ++L     ++     + +HS+ +K  +E + FV ++L+DMYAK G +  A  VF+ + ++
Sbjct: 196 TILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPER 255

Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
           DV++ T++I+G A  G  EEALK F  ++I G+  + V  +S+L+A + L  L  G+QVH
Sbjct: 256 DVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVH 315

Query: 461 AVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGK 520
           +  L+SG  S + + NSL+ +Y+KCG +  A R+FDSM  R  I+W A+++G +++G  +
Sbjct: 316 SHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAR 375

Query: 521 EALQFYDQMLARG-TKPDYITFVGLLFACSHAGLAENARWYFESM-DKVYGIKPGPDHYA 578
           E L+ +  M      KPD IT++ +L  CSH  L +     F +M +   GI+P   HY 
Sbjct: 376 EVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYG 435

Query: 579 CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM 638
           C++DLLGR+G++ EA   + +M   P A +W +LL +CRVH D+E+G      L ELEP 
Sbjct: 436 CVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPE 495

Query: 639 NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPL 698
           NA  YV LSN+Y++AGKWED   +R LM+ + + KEPG SWVE +  VH F + D  HP 
Sbjct: 496 NAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPR 555

Query: 699 RTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA 758
           R ++  K+ E+ +  KE GYVPD++  L++V+EE KE  L  HSEKLA+AFGL+  P+G 
Sbjct: 556 REEVAKKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGT 615

Query: 759 PIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            IR+ KNLR+C DCH+  K++S +Y R +ILRD NRFH+   G CSCGDYW
Sbjct: 616 TIRVIKNLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 666



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 112/342 (32%), Positives = 189/342 (55%), Gaps = 2/342 (0%)

Query: 119 ELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMY 178
           E   QM + G        D +L  C  +  ++ G++ H + IKTC+  + ++ T L+ +Y
Sbjct: 76  EALLQMAILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLY 135

Query: 179 AKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTF 238
            KC C+ +A  +F   P  KN V+WT MI+ YSQ G+ F+A+  F +M     E N FTF
Sbjct: 136 NKCDCLGDAREMFDEMPQ-KNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTF 194

Query: 239 PSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI 298
            +ILT+C      + G Q+H   +   +E++++V S+L+DMYAK G +  A  +      
Sbjct: 195 ATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPE 254

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
            + V+  ++I G+A+ G  +EAL LF+++    +  +  TY SVL   +    LN+ K V
Sbjct: 255 RDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQV 314

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           HS ++++G   Y  + N+LIDMY+K GN+  A  +F+ M ++  ISW +++ G + HG  
Sbjct: 315 HSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMA 374

Query: 419 EEALKYFSDMRISG-ICPDHVVVSSILSACAELTVLEFGQQV 459
            E L+ F  MR    + PD +   ++LS C+   + + G ++
Sbjct: 375 REVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEI 416



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/351 (32%), Positives = 192/351 (54%), Gaps = 5/351 (1%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +I  Y     L +A+++F+E P KN  +W+++I  YS  G   EA  LF +M      P+
Sbjct: 131 LIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPN 190

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
            +T   +L  C      + G Q H  AIK  ++ + FV + L+DMYAK   I +A  +F 
Sbjct: 191 HFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFH 250

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
             P+ ++ VA T +I+GY+Q G   +A++ FR +++EG+ SN  T+ S+LTA + ++A +
Sbjct: 251 CLPE-RDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALN 309

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G QVH  +L SG  + V + ++LIDMY+KCG++  ARR+ +       +SWN+M+VG++
Sbjct: 310 HGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYS 369

Query: 313 RQGFHKEALSLFKKMHARD-IKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIV-KTGFEG 369
           + G  +E L LFK M   + +K D  TY +VL+ C    ++    +  ++++  K G E 
Sbjct: 370 KHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEP 429

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYE 419
                  ++D+  + G ++ AF     M      + W SL+  C  H   E
Sbjct: 430 DIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVE 480



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 122/225 (54%), Gaps = 4/225 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  ++++  YA SGR+ +A  +F+  P ++    +++I GY+  GLD EA +LF Q+Q+E
Sbjct: 227 FVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIE 286

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G   +  T  +VL   S    L  G+Q H + +++       ++  L+DMY+KC  +  A
Sbjct: 287 GMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYA 346

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACA 246
             +F   P+ +  ++W  M+ GYS++G   + +E F+ MR E  V+ +  T+ ++L+ C+
Sbjct: 347 RRIFDSMPE-RTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCS 405

Query: 247 AVSARDFGAQVHGCILS--SGFEANVYVQSALIDMYAKCGDLDSA 289
                D G ++   +++   G E ++     ++D+  + G ++ A
Sbjct: 406 HGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEA 450



 Score = 44.7 bits (104), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 15/122 (12%)

Query: 9   LNFSLRCRSKIIGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDG 67
           LN   +  S ++   +Y++ V         L  +L+D +S  G +  A ++F+ M +R  
Sbjct: 308 LNHGKQVHSHVLRSGQYSYVV---------LLNSLIDMYSKCGNVCYARRIFDSMPERTC 358

Query: 68  FTWNTMIAAYANSGRLREAKKLFN----ETPFK-NFFTWSSLIYGYSNYGLDIEAFELFW 122
            +WN M+  Y+  G  RE  +LF     E   K +  T+ +++ G S+  L+    E+F+
Sbjct: 359 ISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFY 418

Query: 123 QM 124
            M
Sbjct: 419 NM 420


>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 271/754 (35%), Positives = 434/754 (57%), Gaps = 11/754 (1%)

Query: 65   RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
            +D +  + +++ +A  G   +AK +F +   +N  + + L+ G         A ++F +M
Sbjct: 788  QDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM 847

Query: 125  Q-LEGYRPSQYT--LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV-TGLVDMYAK 180
            + L G     Y   L        L+   ++G + H + I+T  + N   +  GLV+MYAK
Sbjct: 848  KDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAK 907

Query: 181  CKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
               I +A  +F++  + K+ V+W ++I+G  QN     A E F  MR  G   + FT  S
Sbjct: 908  SGAIADACSVFELMVE-KDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLIS 966

Query: 241  ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
             L++CA++     G Q+H   L  G + +V V +AL+ +YA+ G      ++       +
Sbjct: 967  TLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYD 1026

Query: 301  EVSWNSMIVGFA-RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
            +VSWNS+I   +  +    +A+  F +M      +   T+ ++L+  +S      +  +H
Sbjct: 1027 QVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIH 1086

Query: 360  SLIVKTGFEGYKFVNNALIDMYAKQGNL-DCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
            +L++K        + NAL+  Y K G + +C  +   + + +D +SW S+I+G  ++   
Sbjct: 1087 ALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELL 1146

Query: 419  EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSL 478
             +A+     M   G   D    +++LSACA +  LE G +VHA  +++   S + V ++L
Sbjct: 1147 HKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSAL 1206

Query: 479  VLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDY 538
            V +Y+KCG I+ A+R F+ M  R+V +W ++I G A++G G++AL+ + +M+  G  PD+
Sbjct: 1207 VDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDH 1266

Query: 539  IT-FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALL 597
            +   +G+L ACSH G  E    +F+SM +VY + P  +H++CM+DLLGR+GKL E    +
Sbjct: 1267 VAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFI 1326

Query: 598  DQMVGEPDATVWKALLSAC-RVHG-DLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
            + M  +P+  +W+ +L AC R +G + ELG RAA  L ELEP NA+ YV L+NMY++  K
Sbjct: 1327 NSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEK 1386

Query: 656  WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
            WED A+ R  MK   ++KE GCSWV     VH+F++ D+ HP +  IY K+ E+   +++
Sbjct: 1387 WEDVAKARXAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKLRELNRKMRD 1446

Query: 716  AGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
            AGY+P   +AL ++E E KE  L+YHSEK+AVAF +LT     PIRI KNLRVCGDCH+A
Sbjct: 1447 AGYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSALPIRIMKNLRVCGDCHSA 1505

Query: 776  MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
              YIS +  R I+LRDSNRFHHF+ G CSCGDYW
Sbjct: 1506 FGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 1539



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 175/573 (30%), Positives = 291/573 (50%), Gaps = 25/573 (4%)

Query: 68   FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
            F  NT+I  Y   G L  A+KLF+E   +N  TW+ LI GY+  G   EA   F  M   
Sbjct: 580  FLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRA 639

Query: 128  GYRPSQYTLDNVLRLCSLKGL--LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC-KCI 184
            G+ P+ Y   + LR C   G    + G Q HG   KT +  +  V   L+ MY  C    
Sbjct: 640  GFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSA 699

Query: 185  FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV----ESNQFTFPS 240
             +A  +F      +N ++W ++I+ YS+ G    A + F  M+ EG+    + N++TF S
Sbjct: 700  NDARSVFDRI-GIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGS 758

Query: 241  ILTACAAVSARDFG----AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
            ++T  AA S+ DFG     Q+   +  SGF  ++YV SAL+  +A+ G  D A+ + E  
Sbjct: 759  LIT--AACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQM 816

Query: 297  EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNIDLN-- 353
             + N VS N ++VG  +Q   + A  +F +M  +D + I+  +Y  +L+ F+    L   
Sbjct: 817  GVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM--KDLVGINSDSYVVLLSAFSEFSVLEEG 874

Query: 354  --NAKSVHSLIVKTGFEGYKF-VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
                + VH+ +++TG    K  + N L++MYAK G +  A  VF LM +KD +SW SLI+
Sbjct: 875  RRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLIS 934

Query: 411  GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
            G   +   E+A + F  MR +G  P +  + S LS+CA L  +  G+Q+H   LK G  +
Sbjct: 935  GLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDT 994

Query: 471  SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN-GKGKEALQFYDQM 529
             +SV N+L+ +YA+ GC  +  +VF  M   D ++W ++I   + +     +A++++ +M
Sbjct: 995  DVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEM 1054

Query: 530  LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGK 589
            +  G     +TF+ +L A S   L E +      + K Y +         ++   G+ G+
Sbjct: 1055 MRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLK-YCLSDDTAIGNALLSCYGKCGE 1113

Query: 590  LIEAKALLDQMVGEPDATVWKALLSACRVHGDL 622
            + E + +  +M    D   W +++S   +H +L
Sbjct: 1114 MNECEKIFARMSETRDEVSWNSMISG-YIHNEL 1145



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 182/363 (50%), Gaps = 24/363 (6%)

Query: 64   DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI-EAFELFW 122
            D D    N ++A YA +G   E  K+F+  P  +  +W+S+I   S+    + +A + F 
Sbjct: 993  DTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFL 1052

Query: 123  QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
            +M   G+  S+ T  N+L   S   L +   Q H   +K C   +  +   L+  Y KC 
Sbjct: 1053 EMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCG 1112

Query: 183  CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
             + E E +F    + ++ V+W +MI+GY  N    KA++    M  +G   + FTF ++L
Sbjct: 1113 EMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVL 1172

Query: 243  TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
            +ACA+V+  + G +VH C + +  E++V V SAL+DMY+KCG +D A R  E   + N  
Sbjct: 1173 SACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVY 1232

Query: 303  SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
            SWNSMI G+AR G  ++AL LF +M   D +  D   P +L   ++          H   
Sbjct: 1233 SWNSMISGYARHGHGEKALKLFTRMML-DGQPPDHVAP-LLGVLSA--------CSHVGF 1282

Query: 363  VKTGFEGYKFVN------------NALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLI 409
            V+ GFE +K ++            + ++D+  + G LD      N M  K +V+ W +++
Sbjct: 1283 VEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVL 1342

Query: 410  TGC 412
              C
Sbjct: 1343 GAC 1345



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 209/444 (47%), Gaps = 36/444 (8%)

Query: 233 SNQFTFPSILT----ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
           S+  TF S++     +C +  AR+   Q     +  GF  N+++ + LI++Y + GDL S
Sbjct: 542 SSSETFESLINRYQGSCCSEEARELHLQS----IKYGFVGNLFLSNTLINIYVRIGDLGS 597

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFA 347
           A++L +     N V+W  +I G+ + G   EA + F+ M       + + + S L  C  
Sbjct: 598 AQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQE 657

Query: 348 SNID-LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK-QGNLDCAFMVFNLMQDKDVISW 405
           S          +H LI KT +     V N LI MY     + + A  VF+ +  ++ ISW
Sbjct: 658 SGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISW 717

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGIC----PDHVVVSSILSACAELTVLEFG----Q 457
            S+I+  +  G    A   FS M+  G+     P+     S+++A    + ++FG    +
Sbjct: 718 NSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAAC--SSVDFGLCVLE 775

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
           Q+ A   KSG    L V ++LV  +A+ G  +DA  +F+ M  R+V++   L++G  +  
Sbjct: 776 QMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQK 835

Query: 518 KGKEALQFYDQML-ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH 576
           +G+ A + + +M    G   D  ++V LL A S   + E  R     +   + I+ G + 
Sbjct: 836 QGEAAAKVFHEMKDLVGINSD--SYVVLLSAFSEFSVLEEGRRKGREV-HAHVIRTGLND 892

Query: 577 YAC-----MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANN 631
                   ++++  +SG + +A ++ + MV E D+  W +L+S    +   E  E AA +
Sbjct: 893 NKVAIGNGLVNMYAKSGAIADACSVFELMV-EKDSVSWNSLISGLDQN---ECSEDAAES 948

Query: 632 LFELEPMNAMP--YVQLSNMYSTA 653
              +    +MP  +  +S + S A
Sbjct: 949 FLRMRRTGSMPSNFTLISTLSSCA 972



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 158/347 (45%), Gaps = 17/347 (4%)

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           T+ S++N +  +     A+ +H   +K GF G  F++N LI++Y + G+L  A  +F+ M
Sbjct: 546 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 605

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE--LTVLEF 455
            ++++++W  LI+G   +G  +EA   F DM  +G  P+H    S L AC E   +  + 
Sbjct: 606 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 665

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKC-GCINDANRVFDSMHTRDVITWTALIMGCA 514
           G Q+H +  K+   S + V N L+ +Y  C    NDA  VFD +  R+ I+W ++I   +
Sbjct: 666 GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYS 725

Query: 515 QNGKGKEALQFYDQMLARGT----KPDYITFVGLLF-ACSHAGLA----ENARWYFESMD 565
           + G    A   +  M   G     KP+  TF  L+  ACS         E      E   
Sbjct: 726 RRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSG 785

Query: 566 KVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELG 625
            +  +  G    + ++    R G   +AK + +QM G  +      L+         E  
Sbjct: 786 FLQDLYVG----SALVSGFARFGLTDDAKNIFEQM-GVRNVVSMNGLMVGLVKQKQGEAA 840

Query: 626 ERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIR 672
            +  + + +L  +N+  YV L + +S     E+  R  + + +  IR
Sbjct: 841 AKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIR 887



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 36/170 (21%)

Query: 42   ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
            ALVD +S  G ID A + FE M  R+ ++WN+MI+ YA  G   +A KLF          
Sbjct: 1205 ALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFT--------- 1255

Query: 101  WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYT-LDNVLRLCSLKGLLQRGEQFHGYA 159
                                  +M L+G  P     L  VL  CS  G ++ G + H  +
Sbjct: 1256 ----------------------RMMLDGQPPDHVAPLLGVLSACSHVGFVEEGFE-HFKS 1292

Query: 160  IKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
            +   + L+  V   + +VD+  +   + E        P   N + W T++
Sbjct: 1293 MSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVL 1342


>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
          Length = 720

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 264/721 (36%), Positives = 401/721 (55%), Gaps = 8/721 (1%)

Query: 96  KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE----GYRPSQYTLDNVLRLCSLKGLLQR 151
           +NF +W+S+I  +S+ G   E+F L  +M  E     + P   TL  VL +C+ +  +  
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60

Query: 152 GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYS 211
           G+  HG+A+K   D    +   L+DMY+KC CI  A+ +FKM  + KN V+W TM+ G+S
Sbjct: 61  GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKM-NNNKNVVSWNTMVGGFS 119

Query: 212 QNGYGFKAIECFRDMRV--EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
             G      +  R M    E V++++ T  + +  C   S      ++H   L   F  N
Sbjct: 120 AEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYN 179

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA 329
             V +A +  YAKCG L  A+R+          SWN++I G A+    + +L    +M  
Sbjct: 180 ELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI 239

Query: 330 RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDC 389
             +  D FT  S+L+  +    L   K VH  I++   E   FV  +++ +Y   G L  
Sbjct: 240 SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCT 299

Query: 390 AFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE 449
              +F+ M+DK ++SW ++ITG   +G  + AL  F  M + GI    + +  +  AC+ 
Sbjct: 300 VQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSL 359

Query: 450 LTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTAL 509
           L  L  G++ HA  LK        +  SL+ +YAK G I  +++VF+ +  +   +W A+
Sbjct: 360 LPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAM 419

Query: 510 IMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG 569
           IMG   +G  KEA++ +++M   G  PD +TF+G+L AC+H+GL      Y + M   +G
Sbjct: 420 IMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFG 479

Query: 570 IKPGPDHYACMIDLLGRSGKLIEA-KALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
           +KP   HYAC+ID+LGR+G+L +A + + ++M  E D  +WK+LLS+CR+H +LE+GE+ 
Sbjct: 480 LKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKV 539

Query: 629 ANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHI 688
           A  LFELEP     YV LSN+Y+  GKWED  +VR+ M    +RK+ GCSW+E N +V  
Sbjct: 540 AAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFS 599

Query: 689 FISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVA 748
           F+  +R      +I S    + + I + GY PD     H++ EE K   L  HSEKLA+ 
Sbjct: 600 FVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALT 659

Query: 749 FGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDY 808
           +GL+   +G  IR++KNLR+C DCH A K IS V  R I++RD+ RFHHFK G CSCGDY
Sbjct: 660 YGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDY 719

Query: 809 W 809
           W
Sbjct: 720 W 720



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 226/455 (49%), Gaps = 6/455 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D++    N ++  Y+  G +  A+ +F     KN  +W++++ G+S  G     F++  Q
Sbjct: 74  DKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQ 133

Query: 124 MQL--EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
           M    E  +  + T+ N + +C  +  L   ++ H Y++K  F  N  V    V  YAKC
Sbjct: 134 MLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKC 193

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
             +  A+ +F      K   +W  +I G++Q+     +++    M++ G+  + FT  S+
Sbjct: 194 GSLSYAQRVFHGIRS-KTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSL 252

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           L+AC+ + +   G +VHG I+ +  E +++V  +++ +Y  CG+L + + L +  E  + 
Sbjct: 253 LSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSL 312

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           VSWN++I G+ + GF   AL +F++M    I++   +   V    +    L   +  H+ 
Sbjct: 313 VSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAY 372

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
            +K   E   F+  +LIDMYAK G++  +  VFN +++K   SW ++I G   HG  +EA
Sbjct: 373 ALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEA 432

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVL 480
           +K F +M+ +G  PD +    +L+AC    ++  G +       S G   +L     ++ 
Sbjct: 433 IKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVID 492

Query: 481 VYAKCGCINDANRVF--DSMHTRDVITWTALIMGC 513
           +  + G ++ A RV   +     DV  W +L+  C
Sbjct: 493 MLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSC 527



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 176/352 (50%), Gaps = 4/352 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N  +A+YA  G L  A+++F+    K   +W++LI G++       + +   QM++ G  
Sbjct: 184 NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLL 243

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  +T+ ++L  CS    L+ G++ HG+ I+   + + FV   ++ +Y  C  +   + L
Sbjct: 244 PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQAL 303

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F    D K+ V+W T+ITGY QNG+  +A+  FR M + G++    +   +  AC+ + +
Sbjct: 304 FDAMED-KSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPS 362

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              G + H   L    E + ++  +LIDMYAK G +  + ++    +  +  SWN+MI+G
Sbjct: 363 LRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMG 422

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEG 369
           +   G  KEA+ LF++M       DD T+  VL  C  S +     + +  +    G + 
Sbjct: 423 YGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKP 482

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVF--NLMQDKDVISWTSLITGCAYHGSYE 419
                  +IDM  + G LD A  V    + ++ DV  W SL++ C  H + E
Sbjct: 483 NLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLE 534


>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 638

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 241/591 (40%), Positives = 367/591 (62%), Gaps = 2/591 (0%)

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
           E    M + G E     + SIL  C +  A   G +VH  ++ + +  +VY+++ LI +Y
Sbjct: 48  EALLQMAILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLY 107

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
            KC  L  AR + +     N VSW +MI  ++++GF  EAL+LF +M   D + + FT+ 
Sbjct: 108 NKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFA 167

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
           ++L     ++     + +HS+ +K  +E + FV ++L+DMYAK G +  A  VF+ + ++
Sbjct: 168 TILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPER 227

Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
           DV++ T++I+G A  G  EEALK F  ++I G+  + V  +S+L+A + L  L  G+QVH
Sbjct: 228 DVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVH 287

Query: 461 AVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGK 520
           +  L+SG  S + + NSL+ +Y+KCG +  A R+FDSM  R  I+W A+++G +++G  +
Sbjct: 288 SHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAR 347

Query: 521 EALQFYDQMLARG-TKPDYITFVGLLFACSHAGLAENARWYFESM-DKVYGIKPGPDHYA 578
           E L+ +  M      KPD IT++ +L  CSH  L +     F +M +   GI+P   HY 
Sbjct: 348 EVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYG 407

Query: 579 CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM 638
           C++DLLGR+G++ EA   + +M   P A +W +LL +CRVH D+E+G      L ELEP 
Sbjct: 408 CVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPE 467

Query: 639 NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPL 698
           NA  YV LSN+Y++AGKWED   +R LM+ + + KEPG SWVE +  VH F + D  HP 
Sbjct: 468 NAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPR 527

Query: 699 RTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA 758
           R ++ +K+ E+ +  KE GYVPD++  L++V+EE KE  L  HSEKLA+AFGL+  P+G 
Sbjct: 528 REEVANKVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGT 587

Query: 759 PIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            IR+ KNLR+C DCH+  K++S +Y R +ILRD NRFH+   G CSCGDYW
Sbjct: 588 TIRVIKNLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 638



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 111/342 (32%), Positives = 190/342 (55%), Gaps = 2/342 (0%)

Query: 119 ELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMY 178
           E   QM + G        D++L  C  +  ++ G++ H + IKTC+  + ++ T L+ +Y
Sbjct: 48  EALLQMAILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLY 107

Query: 179 AKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTF 238
            KC C+ +A  +F   P  +N V+WT MI+ YSQ G+ F+A+  F +M     E N FTF
Sbjct: 108 NKCDCLGDARGMFDEMPQ-RNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTF 166

Query: 239 PSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI 298
            +ILT+C      + G Q+H   +   +E++++V S+L+DMYAK G +  A  +      
Sbjct: 167 ATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPE 226

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
            + V+  ++I G+A+ G  +EAL LF+++    +  +  TY SVL   +    LN+ K V
Sbjct: 227 RDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQV 286

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           HS ++++G   Y  + N+LIDMY+K GN+  A  +F+ M ++  ISW +++ G + HG  
Sbjct: 287 HSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMA 346

Query: 419 EEALKYFSDMRISG-ICPDHVVVSSILSACAELTVLEFGQQV 459
            E L+ F  MR    + PD +   ++LS C+   + + G ++
Sbjct: 347 REVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEI 388



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 114/351 (32%), Positives = 191/351 (54%), Gaps = 5/351 (1%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +I  Y     L +A+ +F+E P +N  +W+++I  YS  G   EA  LF +M      P+
Sbjct: 103 LIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPN 162

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
            +T   +L  C      + G Q H  AIK  ++ + FV + L+DMYAK   I +A  +F 
Sbjct: 163 HFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFH 222

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
             P+ ++ VA T +I+GY+Q G   +A++ FR +++EG+ SN  T+ S+LTA + ++A +
Sbjct: 223 CLPE-RDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALN 281

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G QVH  +L SG  + V + ++LIDMY+KCG++  ARR+ +       +SWN+M+VG++
Sbjct: 282 HGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYS 341

Query: 313 RQGFHKEALSLFKKMHARD-IKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIV-KTGFEG 369
           + G  +E L LFK M   + +K D  TY +VL+ C    ++    +  ++++  K G E 
Sbjct: 342 KHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEP 401

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYE 419
                  ++D+  + G ++ AF     M      + W SL+  C  H   E
Sbjct: 402 DIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVE 452



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 122/225 (54%), Gaps = 4/225 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  ++++  YA SGR+ +A  +F+  P ++    +++I GY+  GLD EA +LF Q+Q+E
Sbjct: 199 FVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIE 258

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G   +  T  +VL   S    L  G+Q H + +++       ++  L+DMY+KC  +  A
Sbjct: 259 GMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYA 318

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACA 246
             +F   P+ +  ++W  M+ GYS++G   + +E F+ MR E  V+ +  T+ ++L+ C+
Sbjct: 319 RRIFDSMPE-RTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCS 377

Query: 247 AVSARDFGAQVHGCILSS--GFEANVYVQSALIDMYAKCGDLDSA 289
                D G ++   +++   G E ++     ++D+  + G ++ A
Sbjct: 378 HGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEA 422



 Score = 44.7 bits (104), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 15/122 (12%)

Query: 9   LNFSLRCRSKIIGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDG 67
           LN   +  S ++   +Y++ V         L  +L+D +S  G +  A ++F+ M +R  
Sbjct: 280 LNHGKQVHSHVLRSGQYSYVV---------LLNSLIDMYSKCGNVCYARRIFDSMPERTC 330

Query: 68  FTWNTMIAAYANSGRLREAKKLFN----ETPFK-NFFTWSSLIYGYSNYGLDIEAFELFW 122
            +WN M+  Y+  G  RE  +LF     E   K +  T+ +++ G S+  L+    E+F+
Sbjct: 331 ISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFY 390

Query: 123 QM 124
            M
Sbjct: 391 NM 392


>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
 gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
 gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
 gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 687

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 250/664 (37%), Positives = 389/664 (58%), Gaps = 7/664 (1%)

Query: 147 GLLQRGEQFHGYAIKTC-FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTT 205
           G L  G+  H   ++   FD+  +    L+ +Y KC  +  A  +F   P  +N V+   
Sbjct: 30  GELSLGKAVHARVVRAARFDVVQY--NNLIALYVKCGRLGLARQVFDAMPS-RNPVSGNL 86

Query: 206 MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
           +++GY+ +G    A+     +RV     N++   S + A A V + D G Q HG  + +G
Sbjct: 87  LMSGYASSGRHRDALAL---LRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAG 143

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
              + YV SA++ MY +C  +D A ++ +     N  ++NSMI GF  +G    + S+ +
Sbjct: 144 LAEHPYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVR 203

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
            M     + D  +Y +VL   AS  ++     VH+  +K   E   +V +AL+DMY K  
Sbjct: 204 SMVRNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCD 263

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
               A  VF ++ +K+++SWT+++T    +  +E+AL+ F DM + G+ P+    +  L+
Sbjct: 264 FPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALN 323

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
           +CA L  L+ G  + A  +K+G    L V N+L+ +Y+K G + DA RVF SM  RDV++
Sbjct: 324 SCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVS 383

Query: 506 WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMD 565
           W ++I+G A +G+ +EA++ +  ML     P Y+TF+G+L AC+  GL +   +Y   M 
Sbjct: 384 WNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMM 443

Query: 566 KVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELG 625
           K  G+KPG +HY CM+ LL R G+L EA+  ++      D   W++LLS+C+V+ +  LG
Sbjct: 444 KEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLG 503

Query: 626 ERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQ 685
            R A  +F+L+P +   YV LSNMY+ A +W+   +VR+LM+  G+RKEPG SW++  S+
Sbjct: 504 HRVAEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSE 563

Query: 686 VHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKL 745
           VH+F SED+ HP    I  K+ E++  IK  GYVP++  ALH+VE+E KE  L YHSEKL
Sbjct: 564 VHVFTSEDKKHPYMEQITKKLQELIDKIKVIGYVPNIAVALHDVEDEQKEEHLMYHSEKL 623

Query: 746 AVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSC 805
           A+AFGL+  P+G  IRI KN+R+C DCH A+K IS    R I++RD+ RFH  + G CSC
Sbjct: 624 ALAFGLIRTPKGEAIRIMKNVRICDDCHVAIKLISLATGRRIVVRDTVRFHCIEDGVCSC 683

Query: 806 GDYW 809
            DYW
Sbjct: 684 DDYW 687



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 226/450 (50%), Gaps = 6/450 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D   +N +IA Y   GRL  A+++F+  P +N  + + L+ GY++ G   +A  L   ++
Sbjct: 49  DVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASSGRHRDALAL---LR 105

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           +  +  ++Y L + +   +       G Q HGYAIK     + +V + ++ MY +C  + 
Sbjct: 106 VADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMD 165

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           EA  +F       N  A+ +MI G+   G    +    R M     + +  ++ ++L  C
Sbjct: 166 EAVKVFDNV-SSFNVFAFNSMINGFLDRGQMDGSTSIVRSMVRNVGQWDHVSYVAVLGHC 224

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A+      G+QVH   L    E NVYV SAL+DMY KC     A R+ E     N VSW 
Sbjct: 225 ASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWT 284

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +++  + +    ++AL LF  M    ++ ++FTY   LN  A    L N  ++ +  +KT
Sbjct: 285 AIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKT 344

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G  G   V NAL++MY+K G+++ A  VF  M  +DV+SW S+I G A+HG   EA++ F
Sbjct: 345 GHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAF 404

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD-NSLVLVYAK 484
            DM  +   P +V    +LSACA+L +++ G     + +K  G          +V +  +
Sbjct: 405 HDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCR 464

Query: 485 CGCINDANRVFDSMHT-RDVITWTALIMGC 513
            G +++A R  +S     DV+ W +L+  C
Sbjct: 465 VGRLDEAERFIESNCIGTDVVAWRSLLSSC 494



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 123/254 (48%), Gaps = 3/254 (1%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
           Q  ++  + + +  + ++  Y       EA ++F   P KN  +W++++  Y+   L  +
Sbjct: 239 QALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFED 298

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
           A +LF  M++EG RP+++T    L  C+    L+ G       +KT       V   L++
Sbjct: 299 ALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMN 358

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           MY+K   + +A  +F   P  ++ V+W ++I GY+ +G   +A+E F DM       +  
Sbjct: 359 MYSKSGSVEDARRVFLSMP-CRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYV 417

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
           TF  +L+ACA +   D G      ++   G +      + ++ +  + G LD A R +E 
Sbjct: 418 TFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIES 477

Query: 296 SEIDNE-VSWNSMI 308
           + I  + V+W S++
Sbjct: 478 NCIGTDVVAWRSLL 491



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 4/155 (2%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++  Y+ SG + +A+++F   P ++  +W+S+I GY+++G   EA E F  M      
Sbjct: 354 NALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEV 413

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC-FDLNAFVVTGLVDMYAKCKCIFEAEY 189
           PS  T   VL  C+  GL+  G  +    +K           T +V +  +   + EAE 
Sbjct: 414 PSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAER 473

Query: 190 LFKMFPDGKNHVAWTTMITG---YSQNGYGFKAIE 221
             +    G + VAW ++++    Y   G G +  E
Sbjct: 474 FIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAE 508



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 5/115 (4%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF----KNFFTW 101
           +S SG +++A ++F  M  RD  +WN++I  YA+ GR REA + F++  F     ++ T+
Sbjct: 360 YSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTF 419

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
             ++   +  GL  E F     M  E G +P +     ++ L    G L   E+F
Sbjct: 420 IGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERF 474


>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 687

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 251/665 (37%), Positives = 390/665 (58%), Gaps = 5/665 (0%)

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAW--TTM 206
           + + +Q H   ++T    N    + L+   A      +  Y  K+F   +N   +   TM
Sbjct: 24  ISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHS-GDLNYARKLFTQMQNPDPFICNTM 82

Query: 207 ITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF 266
           I GY+++   ++A+  +  M   GV  + +T+P +L ACA + A   G + H  +L +GF
Sbjct: 83  IRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGF 142

Query: 267 EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK 326
            ++++V +ALI  Y  CG    A  + + S + + V+WN MI     +G  ++A  L  +
Sbjct: 143 GSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDE 202

Query: 327 MHARD-IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           M   D ++ D+ T  S++   A   +L   K +HS   + G +    VNNA++DMY K  
Sbjct: 203 MTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCD 262

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
           +++ A  VFN +++KDV+SWTS+++G A  G ++EAL  F  M+++ I  D + +  +LS
Sbjct: 263 DIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLS 322

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
           ACA+   L+ G+ +H +  K      L ++ +LV +YAKCG I+ A +VF  M  R+V T
Sbjct: 323 ACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFT 382

Query: 506 WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMD 565
           W ALI G A +G G++A+  +DQM      PD +TF+ LL ACSHAGL +     F++M 
Sbjct: 383 WNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMK 442

Query: 566 KVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELG 625
             + I+P  +HY C++DLL R+ K+ +A A ++ M  + ++ +W  LL ACR  G  +L 
Sbjct: 443 NKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLA 502

Query: 626 ERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQ 685
           E+    + ELEP +   YV LSN+Y+   +W+ A ++RK MK++GI K PGCSW+E N  
Sbjct: 503 EKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGM 562

Query: 686 VHIFISEDRGHPLRTDIYSKIDEIMLLIK-EAGYVPDMNFALHNVEEEGKEIGLAYHSEK 744
           +H F++ DR H     IY+ I+E+   +  + G+VP     L ++EEE KE  L  HSEK
Sbjct: 563 IHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEEEEKEHSLFLHSEK 622

Query: 745 LAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCS 804
           LA+A GL++ P G+PIRI KNLRVC DCH+ +K  S VY R I+ RD +RFHHFK G+CS
Sbjct: 623 LAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARDRSRFHHFKEGSCS 682

Query: 805 CGDYW 809
           C D+W
Sbjct: 683 CMDFW 687



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 120/382 (31%), Positives = 197/382 (51%), Gaps = 2/382 (0%)

Query: 76  AYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYT 135
           A ++SG L  A+KLF +    + F  +++I GY+      EA  L++ M   G     YT
Sbjct: 54  ALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYT 113

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
              VL  C+  G ++ G +FH   +K  F  + FV+  L+  Y  C     A  +F    
Sbjct: 114 YPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDE-S 172

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILTACAAVSARDFG 254
             ++ V W  MI  +   G   KA +   +M +++ +  ++ T  S++ ACA +   + G
Sbjct: 173 TVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERG 232

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
             +H      G + N+ V +A++DMY KC D++SA+ +       + +SW SM+ G A+ 
Sbjct: 233 KFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKS 292

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
           G+ +EAL+LF+KM    I++D+ T   VL+  A    L+  K +H LI K        + 
Sbjct: 293 GYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLE 352

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
            AL+DMYAK G++D A  VF  M+ ++V +W +LI G A HG  E+A+  F  M    + 
Sbjct: 353 TALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLM 412

Query: 435 PDHVVVSSILSACAELTVLEFG 456
           PD V   ++L AC+   +++ G
Sbjct: 413 PDDVTFIALLCACSHAGLVDEG 434



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 226/422 (53%), Gaps = 18/422 (4%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM- 124
           D F  N +I  Y N G    A  +F+E+  ++  TW+ +I  + N GL  +AF+L  +M 
Sbjct: 145 DLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMT 204

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
           +L+  RP + T+ +++  C+  G L+RG+  H Y+ +   D N  V   ++DMY KC  I
Sbjct: 205 KLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDI 264

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
             A+ +F    + K+ ++WT+M++G +++GY  +A+  F+ M++  +E ++ T   +L+A
Sbjct: 265 ESAQEVFNRIRE-KDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSA 323

Query: 245 CAAVSARDFGAQVHGCILSSGFEAN--VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           CA   A D G  +H  +L   FE N  + +++AL+DMYAKCG +D A ++     + N  
Sbjct: 324 CAQTGALDQGKYIH--LLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVF 381

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           +WN++I G A  G  ++A+SLF +M    +  DD T+ ++L C  S+  L +        
Sbjct: 382 TWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALL-CACSHAGLVDEGLAMFQA 440

Query: 363 VKTGFEGYKFVNN--ALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYE 419
           +K  F+    + +   ++D+  +   +D A   + N+    + + W +L+  C   G ++
Sbjct: 441 MKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFD 500

Query: 420 EALKYFSDMRISGICPD----HVVVSSILSACAELT-VLEFGQQVHAVFL-KSGGCSSLS 473
            A K     R+  + PD    +V++S++ +  ++    L+  +Q+    + K+ GCS + 
Sbjct: 501 LAEKI--GRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIE 558

Query: 474 VD 475
           ++
Sbjct: 559 LN 560



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 71/180 (39%), Gaps = 35/180 (19%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           L  ALVD ++  G ID A Q+F +M  R+ FTWN +I   A  G                
Sbjct: 351 LETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHG---------------- 394

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                        +G D  A  LF QM+ +   P   T   +L  CS  GL+  G     
Sbjct: 395 -------------HGED--AISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMF- 438

Query: 158 YAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGY 215
            A+K  F +   +     +VD+  + + + +A    +  P   N V W T++      G+
Sbjct: 439 QAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGH 498


>gi|326526571|dbj|BAJ97302.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 851

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 273/756 (36%), Positives = 428/756 (56%), Gaps = 18/756 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETP--FKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D F  N++++ Y   GR+ +A+K+F   P   +N  +W++L+   S  G      ELF  
Sbjct: 102 DPFVGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMAALS--GDPRRGLELFRD 159

Query: 124 MQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
             +  G    + TL  VL +C+  G  + G   HG A K+ +D  A V   LVDMYAKC 
Sbjct: 160 CLVAVGGMVDEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPARVGNALVDMYAKCG 219

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE---GVESNQFTFP 239
            + +AE   + FP+  + V+W  M+  Y++N     A    RDM+++    V +++ T  
Sbjct: 220 ELADAE---RAFPEAPSVVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVL 276

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEA-NVYVQSALIDMYAKCGDLDSARRLLEYSEI 298
           S+L AC+  +      ++H   +  G +A +  V +AL+  Y +CG L  A R+      
Sbjct: 277 SVLPACSGPTELSRLRELHAFTVRRGLDAASDKVPNALVAAYGRCGRLLHADRVFTDIRR 336

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKM-HARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
               SWN++I   A+Q     A+ LF +M +A  +K D F+  S+L   A    L + K+
Sbjct: 337 KTVSSWNTLISAHAQQNT-AAAIELFIQMTNACGLKPDGFSIGSLLMACADPKHLLHVKA 395

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLD-CAFMVFNLMQDKDVISWTSLITGCAYHG 416
            H  I++ G E    +  +L+  Y +    +  A ++F+ M++K  + W ++I+G + +G
Sbjct: 396 THGFILRNGLERDTVIRASLLSAYIRCSRTEYLARVLFDAMEEKGEVLWIAMISGYSQNG 455

Query: 417 SYEEALKYFSDMR-ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
              E+L+ F +M+ + G C   +  +S L AC+EL+ +  G+++H   LK+  C    + 
Sbjct: 456 LPGESLQLFREMQSVEGHCSSVISATSALMACSELSSVRLGKEMHCFALKADLCDDPFLS 515

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDV-ITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
           +SL+ +Y+KCG + DA   FD +  RD  ++WTA+I G A NG G+EA++ Y +M   G 
Sbjct: 516 SSLIDMYSKCGFVEDARTFFDRLKARDAKVSWTAMITGYAVNGLGREAVELYGKMRREGM 575

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESM-DKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
           +PD  T++GLL AC HAG+ E    +F+ M +  + I+   +HY+C+I +L R+G+  +A
Sbjct: 576 EPDEFTYLGLLMACGHAGMLEEGLRFFDEMRNHHHKIEVKLEHYSCVIGMLSRAGRFADA 635

Query: 594 KALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTA 653
            AL+ +M  EPDA +  ++LSAC +HG+ ELG   A  L ELEP  A  YV  SNMY+ +
Sbjct: 636 VALMAEMPQEPDAKILSSVLSACHIHGEAELGSDVAERLLELEPDKAEHYVLASNMYAGS 695

Query: 654 GKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLI 713
            +W+D  +VRK+++  GI KEPGCSW++   +V+ F++ +  HP    +      +   I
Sbjct: 696 RRWDDMRKVRKMLRDAGIAKEPGCSWIDVAGKVYSFVAGENPHPEMEQVRGMWRSLEERI 755

Query: 714 KEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCH 773
           +E GYVPD    LH +EEE K   L +HSEK AV FGLL     A +R+FKN+R+C DCH
Sbjct: 756 REIGYVPDTTVVLHELEEEEKVEALWWHSEKQAVTFGLLRTATPATVRVFKNIRMCKDCH 815

Query: 774 TAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            A + IS V  R I++RD  RFHHF+ G CSCGDYW
Sbjct: 816 NAARLISKVTGRDIVVRDKKRFHHFRGGICSCGDYW 851



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 147/507 (28%), Positives = 232/507 (45%), Gaps = 21/507 (4%)

Query: 127 EGYRPSQYTLDNVLRLCSL--KGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
           EG  P ++TL    R C     G    G Q H  A K     + FV   LV MY +C  +
Sbjct: 60  EGIAPDRFTLPPAARSCGFLRVGAAAAGRQVHALAAKLGLPGDPFVGNSLVSMYGRCGRV 119

Query: 185 FEAEYLFKMFPD-GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE-GVESNQFTFPSIL 242
            +AE +F   PD  +N V+W  ++   S  G   + +E FRD  V  G   ++ T  ++L
Sbjct: 120 EDAEKVFGGIPDAARNIVSWNALMAALS--GDPRRGLELFRDCLVAVGGMVDEATLVTVL 177

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
             CAA+   + G  VHG    SG++A   V +AL+DMYAKCG+L  A R   + E  + V
Sbjct: 178 PMCAALGWSETGRAVHGLAAKSGWDAPARVGNALVDMYAKCGELADAER--AFPEAPSVV 235

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARD---IKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           SWN M+  + R      A  L + M  ++   +  D+ T  SVL   +   +L+  + +H
Sbjct: 236 SWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACSGPTELSRLRELH 295

Query: 360 SLIVKTGFEGYK-FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           +  V+ G +     V NAL+  Y + G L  A  VF  ++ K V SW +LI+  A   + 
Sbjct: 296 AFTVRRGLDAASDKVPNALVAAYGRCGRLLHADRVFTDIRRKTVSSWNTLISAHAQQNTA 355

Query: 419 EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSL 478
                +       G+ PD   + S+L ACA+   L   +  H   L++G      +  SL
Sbjct: 356 AAIELFIQMTNACGLKPDGFSIGSLLMACADPKHLLHVKATHGFILRNGLERDTVIRASL 415

Query: 479 VLVYAKCGCINDANRV-FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA-RGTKP 536
           +  Y +C       RV FD+M  +  + W A+I G +QNG   E+LQ + +M +  G   
Sbjct: 416 LSAYIRCSRTEYLARVLFDAMEEKGEVLWIAMISGYSQNGLPGESLQLFREMQSVEGHCS 475

Query: 537 DYITFVGLLFACSHAG---LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
             I+    L ACS      L +    +    D    +   P   + +ID+  + G + +A
Sbjct: 476 SVISATSALMACSELSSVRLGKEMHCFALKAD----LCDDPFLSSSLIDMYSKCGFVEDA 531

Query: 594 KALLDQMVGEPDATVWKALLSACRVHG 620
           +   D++        W A+++   V+G
Sbjct: 532 RTFFDRLKARDAKVSWTAMITGYAVNG 558



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 153/324 (47%), Gaps = 19/324 (5%)

Query: 304 WNSMIVGFARQGFHKEALSLFKKMH--ARDIKIDDFTYP-SVLNCFASNIDLNNA-KSVH 359
           WN+++   +R G H +AL+L   +   +  I  D FT P +  +C    +    A + VH
Sbjct: 32  WNALLADHSRAGRHADALALLPPLLAASEGIAPDRFTLPPAARSCGFLRVGAAAAGRQVH 91

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD--KDVISWTSLITGCAYHGS 417
           +L  K G  G  FV N+L+ MY + G ++ A  VF  + D  ++++SW +L+   A  G 
Sbjct: 92  ALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMA--ALSGD 149

Query: 418 YEEALKYFSDMRIS-GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
               L+ F D  ++ G   D   + ++L  CA L   E G+ VH +  KSG  +   V N
Sbjct: 150 PRRGLELFRDCLVAVGGMVDEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPARVGN 209

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR--GT 534
           +LV +YAKCG + DA R F    +  V++W  ++    +N +   A      M  +  G+
Sbjct: 210 ALVDMYAKCGELADAERAFPEAPS--VVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGS 267

Query: 535 KP-DYITFVGLLFACSHAGLAENARWY-FESMDKVYGIKPGPDHYA-CMIDLLGRSGKLI 591
            P D IT + +L ACS  G  E +R     +     G+    D     ++   GR G+L+
Sbjct: 268 VPADEITVLSVLPACS--GPTELSRLRELHAFTVRRGLDAASDKVPNALVAAYGRCGRLL 325

Query: 592 EAKALLDQMVGEPDATVWKALLSA 615
            A  +    +     + W  L+SA
Sbjct: 326 HADRVFTD-IRRKTVSSWNTLISA 348


>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
          Length = 583

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 241/584 (41%), Positives = 360/584 (61%), Gaps = 1/584 (0%)

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M + G  +    + + +TAC    A   G QVH  ++++ +   V++ + L+ MY +CG 
Sbjct: 1   MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 60

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           LD AR +L+     + VSW +MI G+++   H EAL LF KM       +++T  +VL  
Sbjct: 61  LDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTS 120

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
            +    +   K VHSL+VKT FE + FV ++L+DMYAK  N+  A  VF+ + ++DV+S 
Sbjct: 121 CSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSC 180

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
           T++I+G A  G  EEAL  F  +   G+  +HV  +++++A + L  L++G+QVHA+ L+
Sbjct: 181 TAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILR 240

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
                 +++ NSL+ +Y+KCG +  + RVFD+M  R V++W A++MG  ++G G E +  
Sbjct: 241 KELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISL 300

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
           +   L +  KPD +T + +L  CSH GL +     F+++ K         HY C+IDLLG
Sbjct: 301 FKD-LHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLG 359

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ 645
           RSG+L +A  L++ M  E   ++W +LL ACRVH ++ +GE  A  L E+EP NA  YV 
Sbjct: 360 RSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVI 419

Query: 646 LSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSK 705
           LSN+Y+ AG W+D  +VRKLM  + + KEPG SW+  +  +H F S +R HP + DI +K
Sbjct: 420 LSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAK 479

Query: 706 IDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKN 765
           I EI + IK AG+VPD++  LH+V++E KE  L  HSEKLA+ FGL+  P G  IR+ KN
Sbjct: 480 IKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKN 539

Query: 766 LRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           LR+C DCH   K++S VY R I LRD NRFH    GNC+CGDYW
Sbjct: 540 LRICVDCHNFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 583



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 117/358 (32%), Positives = 197/358 (55%), Gaps = 16/358 (4%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F    ++  Y   G L +A+ + +  P ++  +W+++I GYS     +EA +LF +M   
Sbjct: 46  FLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRA 105

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G  P++YTL  VL  CS    + +G+Q H   +KT F+ + FV + L+DMYAK + I EA
Sbjct: 106 GCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEA 165

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F   P+ ++ V+ T +I+GY+Q G   +A++ FR +  EG++ N  TF +++TA + 
Sbjct: 166 RRVFDTLPE-RDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSG 224

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           +++ D+G QVH  IL       V +Q++LIDMY+KCG L  +RR+ +     + VSWN+M
Sbjct: 225 LASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAM 284

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK--- 364
           ++G+ R G   E +SLFK +H +++K D  T  +VL+  +    ++    +   +VK   
Sbjct: 285 LMGYGRHGLGHEVISLFKDLH-KEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQS 343

Query: 365 ----TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGS 417
               TG  G       +ID+  + G L+ A  +   M  +   S W SL+  C  H +
Sbjct: 344 ALLHTGHYG------CIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHAN 395



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 195/367 (53%), Gaps = 11/367 (2%)

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M L G     +  +  +  C  +  L  G Q H   I   +    F+ T LV MY +C  
Sbjct: 1   MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 60

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A  +    P+ ++ V+WTTMI+GYSQ     +A++ F  M   G   N++T  ++LT
Sbjct: 61  LDDARNVLDRMPE-RSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLT 119

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           +C+   +   G QVH  ++ + FE++++V S+L+DMYAK  ++  ARR+ +     + VS
Sbjct: 120 SCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVS 179

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
             ++I G+A++G  +EAL LF+++++  ++ +  T+ +++   +    L+  K VH+LI+
Sbjct: 180 CTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALIL 239

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           +     +  + N+LIDMY+K G L  +  VF+ M ++ V+SW +++ G   HG   E + 
Sbjct: 240 RKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVIS 299

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            F D+    + PD V + ++LS C+   +++ G  +    +K         + S +L   
Sbjct: 300 LFKDLH-KEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVK---------EQSALLHTG 349

Query: 484 KCGCIND 490
             GCI D
Sbjct: 350 HYGCIID 356


>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 264/715 (36%), Positives = 397/715 (55%), Gaps = 42/715 (5%)

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
           S++T+  + R  SL+ L    +Q H + I+T    + +  + L  + A        EY  
Sbjct: 31  SRHTISLIDRCSSLRQL----KQTHAHMIRTGMFSDPYSASKLFAI-AALSSFASLEYAR 85

Query: 192 KMFPD--GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE--SNQFTFPSILTACAA 247
           K+F +    N   W T+I  Y+       +I  F DM     +   N++TFP ++ A A 
Sbjct: 86  KVFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAE 145

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           VS+   G  +HG  + S   ++V+V ++LI  Y  CGDLDSA ++    +  + VSWNSM
Sbjct: 146 VSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSM 205

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I GF ++G   +AL LFKKM + D+K    T   VL+  A   DL   + V S I +   
Sbjct: 206 INGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRV 265

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE-------- 419
                + NA++DMY K G+++ A  +F+ M++KD ++WT+++ G A    YE        
Sbjct: 266 NVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNA 325

Query: 420 -----------------------EALKYFSDMRIS-GICPDHVVVSSILSACAELTVLEF 455
                                  EAL  F ++++   I  + + + S LSACA++  LE 
Sbjct: 326 MPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALEL 385

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
           G+ +H+   K+G   +  V ++L+ +Y+KCG +  A  VF+S+  RDV  W+A+I G A 
Sbjct: 386 GRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAM 445

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
           +G G EA+  + +M     KP+ +TF  +  ACSH GL + A   F  M+  YGI P   
Sbjct: 446 HGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDK 505

Query: 576 HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
           HYAC++D+LGRSG L +A   ++ M   P  +VW ALL AC++H +L L E A   L EL
Sbjct: 506 HYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLEL 565

Query: 636 EPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG 695
           EP N   +V LSN+Y+ +GKW++ + +RK M+  G++KEPGCS +E +  +H F+S D  
Sbjct: 566 EPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNA 625

Query: 696 HPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEG-KEIGLAYHSEKLAVAFGLLTL 754
           HP+   +Y K+ E+M  +K  GY P+M+  L  +EEE  KE  L  HSEKLA+ +GL++ 
Sbjct: 626 HPMSEKVYGKLHEVMEKLKSNGYEPEMSHVLQIIEEEEMKEQSLNLHSEKLAICYGLIST 685

Query: 755 PQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
                IR+ KNLR+CGDCH   K IS +Y R II+RD  RFHHF+ G CSC D+W
Sbjct: 686 EAPKAIRVIKNLRMCGDCHAVAKLISQLYNREIIVRDRYRFHHFRNGQCSCNDFW 740



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 137/481 (28%), Positives = 239/481 (49%), Gaps = 47/481 (9%)

Query: 74  IAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLD----IEAFELFWQMQLEGY 129
           IAA ++   L  A+K+F+E P  N FTW++LI  Y++ G D    I AF      + + Y
Sbjct: 72  IAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYAS-GPDPVCSIWAFLDMVSSESQCY 130

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
            P++YT   +++  +    L  G+  HG AIK+    + FV   L+  Y  C  +  A  
Sbjct: 131 -PNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACK 189

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +F    + K+ V+W +MI G+ Q G   KA+E F+ M  E V+++  T   +L+ACA + 
Sbjct: 190 VFTTIKE-KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIR 248

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
             +FG +V   I  +    N+ + +A++DMY KCG ++ A+RL +  E  + V+W +M+ 
Sbjct: 249 DLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLD 308

Query: 310 GFA-------------------------------RQGFHKEALSLFKKMH-ARDIKIDDF 337
           G+A                               + G   EAL +F ++   ++IK++  
Sbjct: 309 GYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQI 368

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           T  S L+  A    L   + +HS I K G +   +V +ALI MY+K G+L+ A  VFN +
Sbjct: 369 TLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSV 428

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
           + +DV  W+++I G A HG   EA+  F  M+ + + P+ V  +++  AC+   +++   
Sbjct: 429 EKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVD--- 485

Query: 458 QVHAVFLKSGGCSSLSVDNS----LVLVYAKCGCINDANRVFDSMHTRDVIT-WTALIMG 512
           +  ++F K      +  ++     +V V  + G +  A +  ++M      + W AL+  
Sbjct: 486 EAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGA 545

Query: 513 C 513
           C
Sbjct: 546 C 546



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 211/454 (46%), Gaps = 51/454 (11%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N++I  Y + G L  A K+F     K+  +W+S+I G+   G   +A ELF +M+
Sbjct: 167 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 226

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            E  + S  T+  VL  C+    L+ G +   Y  +   ++N  +   ++DMY KC  I 
Sbjct: 227 SEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 286

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYS-------------------------------QNG 214
           +A+ LF    + K++V WTTM+ GY+                               QNG
Sbjct: 287 DAKRLFDAMEE-KDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNG 345

Query: 215 YGFKAIECFRDMRVE-GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
              +A+  F +++++  ++ NQ T  S L+ACA V A + G  +H  I  +G + N YV 
Sbjct: 346 KPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVT 405

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
           SALI MY+KCGDL+ AR +    E  +   W++MI G A  G   EA+ +F KM   ++K
Sbjct: 406 SALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVK 465

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN-----ALIDMYAKQGNLD 388
            +  T+ +V  C  S+  L       SL  K     Y  V        ++D+  + G L+
Sbjct: 466 PNGVTFTNVF-CACSHTGL--VDEAESLFYKME-SSYGIVPEDKHYACIVDVLGRSGYLE 521

Query: 389 CAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEALKYFSDMRISGICPD----HVVVSSI 443
            A      M      S W +L+  C  H +   +L   +  R+  + P     HV++S+I
Sbjct: 522 KAVKFIEAMPIPPSTSVWGALLGACKIHANL--SLAEMACTRLLELEPRNDGAHVLLSNI 579

Query: 444 LSACAEL-TVLEFGQQVHAVFL-KSGGCSSLSVD 475
            +   +   V E  + +    L K  GCSS+ +D
Sbjct: 580 YAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEID 613



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 141/282 (50%), Gaps = 5/282 (1%)

Query: 31  NSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKL 89
           N V     L  A++D ++  G I++A +LF+ M ++D  TW TM+  YA S     A+++
Sbjct: 263 NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREV 322

Query: 90  FNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGL 148
            N  P K+   W++LI  Y   G   EA  +F ++QL+   + +Q TL + L  C+  G 
Sbjct: 323 LNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGA 382

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
           L+ G   H Y  K    +N +V + L+ MY+KC  + +A  +F    + ++   W+ MI 
Sbjct: 383 LELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSV-EKRDVFVWSAMIG 441

Query: 209 GYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFE 267
           G + +G G +A++ F  M+   V+ N  TF ++  AC+     D    +   + SS G  
Sbjct: 442 GLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIV 501

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMI 308
                 + ++D+  + G L+ A + +E   I    S W +++
Sbjct: 502 PEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 543


>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Brachypodium distachyon]
          Length = 868

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 271/739 (36%), Positives = 403/739 (54%), Gaps = 9/739 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N M++     G    A K+F + P ++ F+W+ ++ GY   G   EA +L+ +M   G R
Sbjct: 133 NAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGAR 192

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  YT   VLR C     L  G + H + ++    +   V+  LV MYAKC  +  A  +
Sbjct: 193 PDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKV 252

Query: 191 FKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
           F    DG    + ++W  MI G+ +N      +E F  M  + VE N  T  S+  A   
Sbjct: 253 F----DGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGL 308

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           +S  DF  ++H   +  GF  +V   ++LI MY+  G +  A  +    E  + +SW +M
Sbjct: 309 LSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAM 368

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I G+ + GF  +AL ++  M   ++  DD T  S L   AS   L+    +H L    GF
Sbjct: 369 ISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGF 428

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
             Y  V NAL++MYAK   ++ A  VF  M DKDVISW+S+I G  ++    EAL YF  
Sbjct: 429 IRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRH 488

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           M ++ + P+ V   + L+ACA    L  G+++HA  L+ G  S   V N+L+ +Y KCG 
Sbjct: 489 M-LADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQ 547

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
              A   F +  T+DV++W  ++ G   +G G  AL F+++ML  G  PD +TFV LL  
Sbjct: 548 TGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCG 607

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
           CS AG+       F SM + Y I P   HYACM+DLL R G+L E    +++M   PDA 
Sbjct: 608 CSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAA 667

Query: 608 VWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
           VW ALL+ CR+H ++ELGE AA  + ELEP +A  +V LS++Y+ AG W + ++VRK M+
Sbjct: 668 VWGALLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMR 727

Query: 668 SRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALH 727
            +G+  + GCSWVE    +H F+++D  HP   +I   +D I   +K +G+ P  +++L 
Sbjct: 728 VKGLEHDYGCSWVEVKGAIHAFLTDDESHPQIKEINDVLDGIYERMKASGFAPVESYSLE 787

Query: 728 NVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHI 787
           + +E  K+  L  HSE+LAVAFGL+    G  I + KN   C  CH  ++ IS +  R I
Sbjct: 788 D-KEVSKDDVLCGHSERLAVAFGLINTTPGTSICVTKNQYTCESCHGILRMISKIVRREI 846

Query: 788 ILRDSNRFHHFKAGNCSCG 806
            +RD+  FHHF+ G+CSCG
Sbjct: 847 TVRDTKEFHHFRDGSCSCG 865



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 121/252 (48%), Gaps = 10/252 (3%)

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           + NA++ M  + G    A+ VF  M ++DV SW  ++ G    G  EEAL  +  M  +G
Sbjct: 131 LGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAG 190

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
             PD      +L +C  +  L  G++VHA  L+ G    + V N+LV +YAKCG +  A 
Sbjct: 191 ARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAAR 250

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
           +VFD M   D I+W A+I G  +N + +  L+ +  ML    +P+ +T   +  A   +G
Sbjct: 251 KVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVA---SG 307

Query: 553 LAENARWYFESMDKVYGIKPG--PDHYAC--MIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           L  +    F        +K G   D   C  +I +    G++ EA  +  +M    DA  
Sbjct: 308 LLSDLD--FAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETR-DAMS 364

Query: 609 WKALLSACRVHG 620
           W A++S    +G
Sbjct: 365 WTAMISGYEKNG 376



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 119/274 (43%), Gaps = 40/274 (14%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           ALV+ ++ S  I++A ++F+ M D+D  +W++MIA +            FN    KNF  
Sbjct: 437 ALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFC-----------FNH---KNF-- 480

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
                          EA   F  M L   +P+  T    L  C+  G L+ G++ H + +
Sbjct: 481 ---------------EALYYFRHM-LADVKPNSVTFIAALAACAATGSLRCGKEIHAHVL 524

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP--DGKNHVAWTTMITGYSQNGYGFK 218
           +       +V   L+D+Y KC    +  Y +  F     K+ V+W  M+ G+  +G+G  
Sbjct: 525 RQGIASEGYVPNALLDLYVKCG---QTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDI 581

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV-HGCILSSGFEANVYVQSALI 277
           A+  F +M   G   ++ TF ++L  C+       G ++ H          N+   + ++
Sbjct: 582 ALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMV 641

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIVG 310
           D+ ++ G L      +    I  + + W +++ G
Sbjct: 642 DLLSRVGRLTEGYNFINRMPITPDAAVWGALLNG 675



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 105/261 (40%), Gaps = 9/261 (3%)

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
           CA HG  ++AL        S   PD     ++   C      E G +       + G   
Sbjct: 73  CA-HGELQQALWLLES---SPEPPDEDAYVALFHLCEWRRAAEHGLRACGHADAAHGTFG 128

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
           L + N+++ +  + G    A +VF  M  RDV +W  ++ G  + G  +EAL  Y +ML 
Sbjct: 129 LRLGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLW 188

Query: 532 RGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLI 591
            G +PD  TF  +L +C         R     + + +G+    D    ++ +  + G + 
Sbjct: 189 AGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLR-FGLGVEVDVLNALVTMYAKCGDVE 247

Query: 592 EAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLF--ELEPMNAMPYVQLSNM 649
            A+ + D M    D   W A+++    + + E G     ++   E+EP N M    ++  
Sbjct: 248 AARKVFDGM-SLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEP-NLMTITSVTVA 305

Query: 650 YSTAGKWEDAARVRKLMKSRG 670
                  + A  +  L   RG
Sbjct: 306 SGLLSDLDFAKEIHALAVKRG 326


>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 252/665 (37%), Positives = 392/665 (58%), Gaps = 2/665 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D+D +   ++I  Y+ +G +  A+ +F++   K   TW+++I GY+  G    + ELF Q
Sbjct: 69  DQDVYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQ 128

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+     P +Y + +VL  CS+   L+ G+Q H Y ++   +++  VV  L+D Y KC  
Sbjct: 129 MRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNR 188

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +     LF      KN ++WTTMI+GY QN + ++A++ F +M   G + + F   S+LT
Sbjct: 189 VKAGRKLFDQMVV-KNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLT 247

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           +C ++ A + G QVH   + +  E+N +V++ LIDMYAK   L  A+++ +     N +S
Sbjct: 248 SCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVIS 307

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           +N+MI G++ Q    EAL LF +M  R       T+ S+L   AS   L  +K +H LI+
Sbjct: 308 YNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLII 367

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K G     F  +ALID+Y+K   +  A  VF  M +KD++ W ++  G   H   EEALK
Sbjct: 368 KXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALK 427

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            +S ++ S   P+    +++++A + L  L  GQQ H   +K G      V N+LV +YA
Sbjct: 428 LYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYA 487

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG I +A ++F+S   RDV+ W ++I   AQ+G+ +EAL  + +M+  G +P+Y+TFV 
Sbjct: 488 KCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVA 547

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           +L ACSHAG  E+   +F SM   +GIKPG +HYAC++ LLGRSGKL EAK  +++M  E
Sbjct: 548 VLSACSHAGXVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIE 606

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
           P A VW++LLSACR+ G++ELG+ AA      +P ++  Y+ LSN++++ G W D  +VR
Sbjct: 607 PAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVR 666

Query: 664 KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMN 723
             M S  + KEPG SW+E N++V++FI+    H     I S +D ++  IK AGYVPD  
Sbjct: 667 DRMDSSEVVKEPGRSWIEVNNKVNVFIARXTTHREADMIGSVLDILIQHIKGAGYVPDAT 726

Query: 724 FALHN 728
             L N
Sbjct: 727 ALLMN 731



 Score =  298 bits (762), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 175/568 (30%), Positives = 296/568 (52%), Gaps = 9/568 (1%)

Query: 112 GLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV 170
           G   EA  +F  +Q + G  P+++ L +V+R C+  G++++G Q HG+ +++ FD + +V
Sbjct: 15  GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 74

Query: 171 VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG 230
            T L+D Y+K   I  A  +F    + K  V WTT+I GY++ G    ++E F  MR   
Sbjct: 75  GTSLIDFYSKNGBIEVARLVFDQLLE-KTAVTWTTIIAGYTKCGRSXVSLELFAQMRETN 133

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           V  +++   S+L+AC+ +   + G Q+H  +L  G E +V V + LID Y KC  + + R
Sbjct: 134 VVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGR 193

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
           +L +   + N +SW +MI G+ +  F  EA+ LF +M+    K D F   SVL    S  
Sbjct: 194 KLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLE 253

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
            L   + VH+  +K   E  +FV N LIDMYAK   L  A  VF++M +++VIS+ ++I 
Sbjct: 254 ALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIE 313

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
           G +      EAL+ F +MR+    P  +   S+L   A L  LE  +Q+H + +K G   
Sbjct: 314 GYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSL 373

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
            L   ++L+ VY+KC  + DA  VF+ M+ +D++ W A+  G  Q+ + +EAL+ Y  + 
Sbjct: 374 DLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQ 433

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKL 590
               KP+  TF  L+ A S+     + + +   + K+ G+   P     ++D+  + G +
Sbjct: 434 FSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKM-GLDFCPFVTNALVDMYAKCGSI 492

Query: 591 IEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFE--LEPMNAMPYVQLSN 648
            EA+ + +  +   D   W +++S    HG+ E        + +  ++P N + +V + +
Sbjct: 493 EEARKMFNSSIWR-DVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQP-NYVTFVAVLS 550

Query: 649 MYSTAGKWEDAARVRKLMKSRGIRKEPG 676
             S AG  ED       M   GI+  PG
Sbjct: 551 ACSHAGXVEDGLNHFNSMPGFGIK--PG 576



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 122/271 (45%), Gaps = 38/271 (14%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           AL+D +S    + +A  +FE+M+++D   WN M   Y       EA KL++         
Sbjct: 380 ALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYS--------- 430

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
                                  +Q    +P+++T   ++   S    L+ G+QFH   +
Sbjct: 431 ----------------------TLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLV 468

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG--KNHVAWTTMITGYSQNGYGFK 218
           K   D   FV   LVDMYAKC  I EA    KMF     ++ V W +MI+ ++Q+G   +
Sbjct: 469 KMGLDFCPFVTNALVDMYAKCGSIEEAR---KMFNSSIWRDVVCWNSMISTHAQHGEAEE 525

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID 278
           A+  FR+M  EG++ N  TF ++L+AC+     + G      +   G +      + ++ 
Sbjct: 526 ALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMPGFGIKPGTEHYACVVS 585

Query: 279 MYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
           +  + G L  A+  +E   I+   + W S++
Sbjct: 586 LLGRSGKLFEAKEFIEKMPIEPAAIVWRSLL 616


>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 615

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 241/584 (41%), Positives = 360/584 (61%), Gaps = 1/584 (0%)

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M + G  +    + + +TAC    A   G QVH  ++++ +   V++ + L+ MY +CG 
Sbjct: 33  MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 92

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           LD AR +L+     + VSW +MI G+++   H EAL LF KM       +++T  +VL  
Sbjct: 93  LDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTS 152

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
            +    +   K VHSL+VKT FE + FV ++L+DMYAK  N+  A  VF+ + ++DV+S 
Sbjct: 153 CSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSC 212

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
           T++I+G A  G  EEAL  F  +   G+  +HV  +++++A + L  L++G+QVHA+ L+
Sbjct: 213 TAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILR 272

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
                 +++ NSL+ +Y+KCG +  + RVFD+M  R V++W A++MG  ++G G E +  
Sbjct: 273 KELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISL 332

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
           +   L +  KPD +T + +L  CSH GL +     F+++ K         HY C+IDLLG
Sbjct: 333 FKD-LHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLG 391

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ 645
           RSG+L +A  L++ M  E   ++W +LL ACRVH ++ +GE  A  L E+EP NA  YV 
Sbjct: 392 RSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVI 451

Query: 646 LSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSK 705
           LSN+Y+ AG W+D  +VRKLM  + + KEPG SW+  +  +H F S +R HP + DI +K
Sbjct: 452 LSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAK 511

Query: 706 IDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKN 765
           I EI + IK AG+VPD++  LH+V++E KE  L  HSEKLA+ FGL+  P G  IR+ KN
Sbjct: 512 IKEIFVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKN 571

Query: 766 LRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           LR+C DCH   K++S VY R I LRD NRFH    GNC+CGDYW
Sbjct: 572 LRICVDCHNFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 615



 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 117/358 (32%), Positives = 197/358 (55%), Gaps = 16/358 (4%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F    ++  Y   G L +A+ + +  P ++  +W+++I GYS     +EA +LF +M   
Sbjct: 78  FLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRA 137

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G  P++YTL  VL  CS    + +G+Q H   +KT F+ + FV + L+DMYAK + I EA
Sbjct: 138 GCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEA 197

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F   P+ ++ V+ T +I+GY+Q G   +A++ FR +  EG++ N  TF +++TA + 
Sbjct: 198 RRVFDTLPE-RDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSG 256

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           +++ D+G QVH  IL       V +Q++LIDMY+KCG L  +RR+ +     + VSWN+M
Sbjct: 257 LASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAM 316

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK--- 364
           ++G+ R G   E +SLFK +H +++K D  T  +VL+  +    ++    +   +VK   
Sbjct: 317 LMGYGRHGLGHEVISLFKDLH-KEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQS 375

Query: 365 ----TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGS 417
               TG  G       +ID+  + G L+ A  +   M  +   S W SL+  C  H +
Sbjct: 376 ALLHTGHYG------CIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHAN 427



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 195/367 (53%), Gaps = 11/367 (2%)

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M L G     +  +  +  C  +  L  G Q H   I   +    F+ T LV MY +C  
Sbjct: 33  MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 92

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A  +    P+ ++ V+WTTMI+GYSQ     +A++ F  M   G   N++T  ++LT
Sbjct: 93  LDDARNVLDRMPE-RSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLT 151

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           +C+   +   G QVH  ++ + FE++++V S+L+DMYAK  ++  ARR+ +     + VS
Sbjct: 152 SCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVS 211

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
             ++I G+A++G  +EAL LF+++++  ++ +  T+ +++   +    L+  K VH+LI+
Sbjct: 212 CTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALIL 271

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           +     +  + N+LIDMY+K G L  +  VF+ M ++ V+SW +++ G   HG   E + 
Sbjct: 272 RKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVIS 331

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            F D+    + PD V + ++LS C+   +++ G  +    +K         + S +L   
Sbjct: 332 LFKDLH-KEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVK---------EQSALLHTG 381

Query: 484 KCGCIND 490
             GCI D
Sbjct: 382 HYGCIID 388



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 69/139 (49%)

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
           G A    +   L+  S M + G         + ++AC E   L  G+QVHA  + +    
Sbjct: 16  GLALQRCFVAPLRAASGMALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRP 75

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
           ++ +   LV +Y +CG ++DA  V D M  R V++WT +I G +Q  +  EAL  + +ML
Sbjct: 76  AVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKML 135

Query: 531 ARGTKPDYITFVGLLFACS 549
             G  P+  T   +L +CS
Sbjct: 136 RAGCIPNEYTLATVLTSCS 154


>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
 gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
          Length = 687

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 261/681 (38%), Positives = 389/681 (57%), Gaps = 14/681 (2%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+ YT    L+ CS       G   H +AI      + FV T L+DMY KC C+ +A ++
Sbjct: 8   PNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHI 67

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE--GVESNQFTFPSILTACAAV 248
           F   P  ++ VAW  M+ GY+ +G    A+     M+++   +  N  T  ++L   A  
Sbjct: 68  FATMP-ARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQ 126

Query: 249 SARDFGAQVHGCILSSGFEAN----------VYVQSALIDMYAKCGDLDSARRLLEYSEI 298
            A   G  VH   + +    N          V + +AL+DMYAKCG L  ARR+ +    
Sbjct: 127 GALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPA 186

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK-IDDFTYPSVLNCFASNIDLNNAKS 357
            NEV+W+++I GF       +A  LFK M A+ +  +   +  S L   AS   L   + 
Sbjct: 187 RNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQ 246

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           +H+L+ K+G        N+L+ MYAK G +D A  +F+ M  KD +S+++L++G   +G 
Sbjct: 247 LHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGR 306

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
            EEA   F  M+   + PD   + S++ AC+ L  L+ G+  H   +  G  S  S+ N+
Sbjct: 307 AEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNA 366

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
           L+ +YAKCG I+ + +VF+ M +RD+++W  +I G   +G GKEA   + +M   G  PD
Sbjct: 367 LIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPD 426

Query: 538 YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALL 597
            +TF+ LL ACSH+GL    + +F  M   YG+ P  +HY CM+DLL R G L EA   +
Sbjct: 427 GVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFI 486

Query: 598 DQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWE 657
             M    D  VW ALL ACRV+ +++LG++ +  + EL P     +V LSN+YS AG+++
Sbjct: 487 QSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFD 546

Query: 658 DAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAG 717
           +AA VR + K +G +K PGCSW+E N  +H F+  D+ HP   +IY ++D I++ IK+ G
Sbjct: 547 EAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLG 606

Query: 718 YVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMK 777
           Y PD +F L ++EEE KE  L  HSEKLA+A+G+L+L +   I + KNLRVCGDCHT +K
Sbjct: 607 YQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIK 666

Query: 778 YISAVYLRHIILRDSNRFHHF 798
           +IS V  R II+RD+NRFHHF
Sbjct: 667 HISLVKRRAIIVRDANRFHHF 687



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 153/527 (29%), Positives = 250/527 (47%), Gaps = 24/527 (4%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFE--LFWQ 123
           D F    ++  Y     L +A  +F   P ++   W++++ GY+++G+   A    L  Q
Sbjct: 44  DLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQ 103

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLN----------AFVVTG 173
           MQ+   RP+  TL  +L L + +G L +G   H Y I+ C   N            + T 
Sbjct: 104 MQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTA 163

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV-E 232
           L+DMYAKC  +  A  +F   P  +N V W+ +I G+       +A   F+ M  +G+  
Sbjct: 164 LLDMYAKCGSLLYARRVFDAMP-ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCF 222

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
            +  +  S L ACA++     G Q+H  +  SG  A++   ++L+ MYAK G +D A  L
Sbjct: 223 LSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIAL 282

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
            +   + + VS+++++ G+ + G  +EA  +FKKM A +++ D  T  S++   +    L
Sbjct: 283 FDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAAL 342

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
            + +  H  ++  G      + NALIDMYAK G +D +  VFN+M  +D++SW ++I G 
Sbjct: 343 QHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGY 402

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL-TVLEFGQQVHAVFLKSGGCSS 471
             HG  +EA   F +M   G  PD V    +LSAC+    V+E     H +    G    
Sbjct: 403 GIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPR 462

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGK---GKEALQFYD 527
           +     +V + ++ G +++A     SM  R DV  W AL+  C        GK+  +   
Sbjct: 463 MEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQ 522

Query: 528 QMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
           ++   GT      FV L    S AG  + A      + KV G K  P
Sbjct: 523 ELGPEGTG----NFVLLSNIYSAAGRFDEAA-EVRIIQKVQGFKKSP 564



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 213/425 (50%), Gaps = 18/425 (4%)

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           V  N +TFP  L AC+A++    G  +H   + +G +A+++V +AL+DMY KC  L  A 
Sbjct: 6   VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALS--LFKKMHARDIKIDDFTYPSVLNCFAS 348
            +       + V+WN+M+ G+A  G +  A++  L  +M    ++ +  T  ++L   A 
Sbjct: 66  HIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQ 125

Query: 349 NIDLNNAKSVHSLIVKTGFEGYK----------FVNNALIDMYAKQGNLDCAFMVFNLMQ 398
              L    SVH+  ++      +           +  AL+DMYAK G+L  A  VF+ M 
Sbjct: 126 QGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMP 185

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC-PDHVVVSSILSACAELTVLEFGQ 457
            ++ ++W++LI G        +A   F  M   G+C      ++S L ACA L  L  G+
Sbjct: 186 ARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGE 245

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
           Q+HA+  KSG  + L+  NSL+ +YAK G I+ A  +FD M  +D ++++AL+ G  QNG
Sbjct: 246 QLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNG 305

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY 577
           + +EA   + +M A   +PD  T V L+ ACSH    ++ R    S+  + G+       
Sbjct: 306 RAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSV-IIRGLASETSIC 364

Query: 578 ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEP 637
             +ID+  + G++  ++ + + M    D   W  +++   +HG   LG+ A     E+  
Sbjct: 365 NALIDMYAKCGRIDLSRQVFNMMPSR-DIVSWNTMIAGYGIHG---LGKEATALFLEMNN 420

Query: 638 MNAMP 642
           +   P
Sbjct: 421 LGFPP 425



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 128/424 (30%), Positives = 207/424 (48%), Gaps = 15/424 (3%)

Query: 66  DGFTWNT-MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           DG    T ++  YA  G L  A+++F+  P +N  TWS+LI G+       +AF LF  M
Sbjct: 156 DGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAM 215

Query: 125 QLEGY-RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
             +G    S  ++ + LR C+    L+ GEQ H    K+    +      L+ MYAK   
Sbjct: 216 LAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGL 275

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I +A  LF      K+ V+++ +++GY QNG   +A   F+ M+   VE +  T  S++ 
Sbjct: 276 IDQAIALFDEMAV-KDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIP 334

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC+ ++A   G   HG ++  G  +   + +ALIDMYAKCG +D +R++       + VS
Sbjct: 335 ACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVS 394

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLI 362
           WN+MI G+   G  KEA +LF +M+      D  T+  +L+ C  S + +      H + 
Sbjct: 395 WNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMG 454

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGSYEEA 421
              G          ++D+ ++ G LD A+     M  + DV  W +L+  C  + + +  
Sbjct: 455 HGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLG 514

Query: 422 LKYFSDMRISGICPD----HVVVSSILSACA---ELTVLEFGQQVHAVFLKSGGCSSLSV 474
            K  S M I  + P+     V++S+I SA     E   +   Q+V   F KS GCS + +
Sbjct: 515 -KKVSRM-IQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQG-FKKSPGCSWIEI 571

Query: 475 DNSL 478
           + SL
Sbjct: 572 NGSL 575



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 56/125 (44%), Gaps = 6/125 (4%)

Query: 37  SDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF 95
           + +  AL+D ++  G ID + Q+F  M  RD  +WNTMIA Y   G  +EA  LF E   
Sbjct: 361 TSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNN 420

Query: 96  KNF----FTWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQYTLDNVLRLCSLKGLLQ 150
             F     T+  L+   S+ GL IE    F  M    G  P       ++ L S  G L 
Sbjct: 421 LGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLD 480

Query: 151 RGEQF 155
              +F
Sbjct: 481 EAYEF 485


>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 258/712 (36%), Positives = 400/712 (56%), Gaps = 14/712 (1%)

Query: 16  RSKIIGPARYTHNVGNS----VKPASDLNRALVDFSNSGEIDEAGQ-----LFEKMSDRD 66
           +SKI+       ++G S         DL   L D +  G I EA       L     D+D
Sbjct: 40  KSKIVVGRNRPESIGISETYQQTQVQDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKD 99

Query: 67  GFT-WNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
               +N     Y+     R A  +F+E P +N F+W+ +I G + +GL  + F+ F +M 
Sbjct: 100 LMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEML 159

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G  P ++    +++ C     L+ G+  H   +   F  + FV T L++MYAK   I 
Sbjct: 160 NSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIE 219

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           ++ ++F M  +  N V+W  MI+G + NG   +A + F  M+      N +T  S+  A 
Sbjct: 220 DSYWVFNMMTE-HNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAV 278

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-- 303
             +   + G +V  C    G E NV V +ALIDMY+KCG L  AR + + + I+  V+  
Sbjct: 279 GKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTP 338

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN+MI G+++ G  +EAL L+ +M    I  D +TY SV N  A++  L   + VH +++
Sbjct: 339 WNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVL 398

Query: 364 KTGFEGYKF-VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           K G +     VNNA+ D Y+K G L+    VF+ M+++D++SWT+L+T  +     EEAL
Sbjct: 399 KCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEAL 458

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
             F  MR  G  P+    SS+L +CA L  LE+G+QVH +  K+G  +   ++++L+ +Y
Sbjct: 459 ATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMY 518

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
           AKCG I +A +VFD +   D+++WTA+I G AQ+G  ++ALQ + +M   G K + +T +
Sbjct: 519 AKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLL 578

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
            +LFACSH G+ E   +YF+ M+  YG+ P  +HYAC+IDLLGR G+L +A   + +M  
Sbjct: 579 CVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPM 638

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
           EP+  VW+ LL  CRVHG++ELGE AA  +  + P  +  YV LSN Y   G +ED   +
Sbjct: 639 EPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSL 698

Query: 663 RKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIK 714
           R +MK +G++KEPG SW+    +VH F S D+ HP + +IY K++E+   IK
Sbjct: 699 RNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIYVKLEELREKIK 750


>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 233/603 (38%), Positives = 360/603 (59%), Gaps = 31/603 (5%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA-------- 289
           F  +L +C + ++   G Q+H  I++SG  ++ ++ + L+++Y+KCG LD+A        
Sbjct: 55  FSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMP 114

Query: 290 -----------------------RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK 326
                                  R++ +     N  +WN+M+ G  +  F++E L LF +
Sbjct: 115 RKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSR 174

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
           M+      D+F   SVL   A    L   + VH  + K GFE    V ++L  MY K G+
Sbjct: 175 MNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGS 234

Query: 387 LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSA 446
           L     +   M  ++V++W +LI G A +G  EE L  ++ M+++G  PD +   S++S+
Sbjct: 235 LGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISS 294

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITW 506
           C+EL  L  GQQ+HA  +K+G    +SV +SL+ +Y++CGC+  + +VF      DV+ W
Sbjct: 295 CSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCW 354

Query: 507 TALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDK 566
           +++I     +G+G EA+  ++QM     + + +TF+ LL+ACSH GL E    +F+ M +
Sbjct: 355 SSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVE 414

Query: 567 VYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGE 626
            YG+KP  +HY CM+DLLGR G + EA+AL+  M  + D   WK LLSAC++H   E+  
Sbjct: 415 KYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMAR 474

Query: 627 RAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQV 686
           R +  +F L+P + +PYV LSN++++  +W+D + VRK M+ R ++KEPG SW+E  +Q+
Sbjct: 475 RISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGISWLEVKNQI 534

Query: 687 HIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLA 746
           H F   D+ HP   +I S + E+   +K+ GYVPD++  LH+++ E KE  L +HSEKLA
Sbjct: 535 HQFCMGDKSHPKSVEIASYLRELTSEMKKRGYVPDIDSVLHDMDVEDKEYSLVHHSEKLA 594

Query: 747 VAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCG 806
           +AF LL  P G PIR+ KNLRVC DCH A+KYIS +  R II+RDS+RFHHFK G CSCG
Sbjct: 595 IAFALLYTPVGTPIRVIKNLRVCSDCHVAIKYISEISNREIIVRDSSRFHHFKNGRCSCG 654

Query: 807 DYW 809
           DYW
Sbjct: 655 DYW 657



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 202/386 (52%), Gaps = 3/386 (0%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  L  +S  G++D A  LF  M  ++  + N +I  Y  SG    A+K+F+E P +N  
Sbjct: 91  NHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVA 150

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           TW++++ G   +  + E   LF +M   G+ P ++ L +VLR C+    L  G Q HGY 
Sbjct: 151 TWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYV 210

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
            K  F+ N  VV+ L  MY KC  + E E L +  P  +N VAW T+I G +QNGY  + 
Sbjct: 211 RKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMP-SQNVVAWNTLIAGRAQNGYPEEV 269

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           ++ +  M++ G   ++ TF S++++C+ ++    G Q+H  ++ +G    V V S+LI M
Sbjct: 270 LDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISM 329

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           Y++CG L+ + ++    E  + V W+SMI  +   G   EA+ LF +M    ++ +D T+
Sbjct: 330 YSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTF 389

Query: 340 PSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
            S+L  C    +     K    ++ K G +        ++D+  + G+++ A  +   M 
Sbjct: 390 LSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMP 449

Query: 399 DK-DVISWTSLITGCAYHGSYEEALK 423
            K DVI+W +L++ C  H   E A +
Sbjct: 450 VKADVITWKTLLSACKIHKKTEMARR 475



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 122/461 (26%), Positives = 209/461 (45%), Gaps = 40/461 (8%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           PS ++  ++L+ C  +  L  G+Q H   I +    + F+   L+++Y+KC  +  A  L
Sbjct: 52  PSLFS--HLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITL 109

Query: 191 FKMFPDG------------------------------KNHVAWTTMITGYSQNGYGFKAI 220
           F + P                                +N   W  M+ G  Q  +  + +
Sbjct: 110 FGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGL 169

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
             F  M   G   ++F   S+L  CA + A   G QVHG +   GFE N+ V S+L  MY
Sbjct: 170 GLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMY 229

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
            KCG L    RL+      N V+WN++I G A+ G+ +E L  +  M     + D  T+ 
Sbjct: 230 MKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFV 289

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
           SV++  +    L   + +H+ ++K G      V ++LI MY++ G L+ +  VF   ++ 
Sbjct: 290 SVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENG 349

Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
           DV+ W+S+I    +HG   EA+  F+ M    +  + V   S+L AC+   + E G +  
Sbjct: 350 DVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFF 409

Query: 461 AVFLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGK 518
            + ++  G    L     +V +  + G + +A  +  SM  + DVITW  L+  C  + K
Sbjct: 410 DLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKK 469

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW 559
            + A +  +++  R    D + +V  L +  HA    + RW
Sbjct: 470 TEMARRISEEVF-RLDPRDPVPYV--LLSNIHAS---DKRW 504



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 73/179 (40%), Gaps = 37/179 (20%)

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
           T+  T     G  ++A   FS    S I  +  + S +L +C     L  G+Q+H++ + 
Sbjct: 25  TAEFTNLCSKGHLKQAFDRFS----SHIWSEPSLFSHLLQSCISENSLSLGKQLHSLIIT 80

Query: 466 SGGCSSLSVDNSLVLVYAKCGCIN-------------------------------DANRV 494
           SG  S   + N L+ +Y+KCG ++                                A ++
Sbjct: 81  SGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKM 140

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGL 553
           FD M  R+V TW A++ G  Q    +E L  + +M   G  PD      +L  C  AGL
Sbjct: 141 FDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGC--AGL 197


>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 700

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 242/651 (37%), Positives = 386/651 (59%), Gaps = 8/651 (1%)

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
           + N   +  L+++Y KC  +  A YLF      ++ V++  ++ GY  +G   + ++ F+
Sbjct: 52  EFNIIQLNSLINLYVKCSKLRLARYLFDEMSL-RSVVSYNVLMGGYLHSGEHLEVVKLFK 110

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDF-GAQVHGCILSSGFEANVYVQSALIDMYAKC 283
           +M     + N++ F ++L+ACA  S R F G Q HG +   G   + +V+S+L+ MY+KC
Sbjct: 111 NMVSSLYQPNEYVFTTVLSACAH-SGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKC 169

Query: 284 GDLDSARRLLE--YSEIDNE---VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
             +D A ++LE  +  IDN+     +NS++      G   EA+ +  +M    +  D  T
Sbjct: 170 FHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVT 229

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
           Y SV+       DL     VH+ ++K G     FV + L+DM+ K G++  A  VF+ +Q
Sbjct: 230 YVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQ 289

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
           +++V+ WTSL+T    +G +EE L   S M   G   +    + +L+A A +  L  G  
Sbjct: 290 NRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDL 349

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK 518
           +HA   K G  + + V N+L+ +Y+KCGCI+ +  VF  M  RD+ITW A+I G +Q+G 
Sbjct: 350 LHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGL 409

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA 578
           GK+AL  +  ML+ G  P+++TFVG+L AC+H  L     +Y   + K + ++PG +HY 
Sbjct: 410 GKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYT 469

Query: 579 CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM 638
           C++ +L R+G L EA+  +     + D   W+ LL+AC +H +  LG + A  + +++P 
Sbjct: 470 CVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPR 529

Query: 639 NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPL 698
           +   Y  LSNMY+ A  W+    +RK+M+ R ++KEPG SW+E  + VH+F S+   HP 
Sbjct: 530 DMGTYTLLSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPE 589

Query: 699 RTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA 758
              IY+K+  ++ +IK+ GYVP++   LH+VE+E KE  L YHSEKLA+A+GL+ +P  A
Sbjct: 590 CIQIYNKVQLLLEMIKQLGYVPNIEAVLHDVEDEQKESYLNYHSEKLAIAYGLMKIPSPA 649

Query: 759 PIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           PIR+ KNLR+C DCHTA+K IS V  R II+RD++RFHHF+ G C+C D+W
Sbjct: 650 PIRVIKNLRICEDCHTAVKLISKVTNRLIIVRDASRFHHFRDGTCTCTDHW 700



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/455 (29%), Positives = 231/455 (50%), Gaps = 18/455 (3%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N++I  Y    +LR A+ LF+E   ++  +++ L+ GY + G  +E  +LF  M    Y+
Sbjct: 59  NSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQ 118

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P++Y    VL  C+  G +  G Q HG+  K     + FV + LV MY+KC   F  +  
Sbjct: 119 PNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKC---FHVDLA 175

Query: 191 FKMFPDGKNHV-------AWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
            ++      ++        + +++    ++G   +A+E    M  EGV  +  T+ S++ 
Sbjct: 176 LQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMG 235

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
            C  +     G QVH  +L  G   +V+V S L+DM+ KCGD+ SAR++ +  +  N V 
Sbjct: 236 LCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVV 295

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           W S++  + + G  +E L+L   M       ++FT+  +LN FA    L +   +H+ + 
Sbjct: 296 WTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVE 355

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K G +    V NALI+MY+K G +D ++ VF  M+++D+I+W ++I G + HG  ++AL 
Sbjct: 356 KLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALL 415

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFG----QQVHAVFLKSGGCSSLSVDNSLV 479
            F DM  +G CP+HV    +LSACA L ++  G     Q+   F    G    +    +V
Sbjct: 416 LFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYT---CVV 472

Query: 480 LVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
            V  + G + +A     +   + DV+ W  L+  C
Sbjct: 473 AVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNAC 507



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 87/363 (23%), Positives = 151/363 (41%), Gaps = 50/363 (13%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            QL +     D F  + ++  +   G +  A+K+F+    +N   W+SL+  Y   G   
Sbjct: 251 AQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFE 310

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           E   L   M  EG   +++T   +L   +    L+ G+  H    K        V   L+
Sbjct: 311 ETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALI 370

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNH--VAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
           +MY+KC CI  +   + +F D +N   + W  MI GYSQ+G G +A+  F+DM   G   
Sbjct: 371 NMYSKCGCIDSS---YDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECP 427

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
           N  TF  +L+ACA           H  +++ GF    Y+   +     + G        L
Sbjct: 428 NHVTFVGVLSACA-----------HLALVNEGF---YYLNQLMKHFKVEPG--------L 465

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
           E+        +  ++    R G  +EA +    M    +K D   +  +LN    + + N
Sbjct: 466 EH--------YTCVVAVLCRAGMLEEAENF---MRTTQVKWDVVAWRVLLNACNIHRNYN 514

Query: 354 NAKSVHSLIVKT---GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV-----ISW 405
               +   I++        Y  ++N    MYAK  + D   M+  +M++++V     +SW
Sbjct: 515 LGTKIAETILQMDPRDMGTYTLLSN----MYAKARSWDSVTMIRKMMRERNVKKEPGVSW 570

Query: 406 TSL 408
             +
Sbjct: 571 IEI 573


>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
 gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
          Length = 766

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 242/652 (37%), Positives = 388/652 (59%), Gaps = 3/652 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +I  Y        A+++F+E P +N  +W+S+I  +   G   +A  LF  M   G  
Sbjct: 90  NHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTA 149

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
             Q+ L + +R C+  G +  G Q H +A+K+    +  V   LV MY+K   + +   L
Sbjct: 150 ADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFML 209

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE-SNQFTFPSILTACAAVS 249
           F+   D K+ ++W ++I G++Q G+  +A++ FR+M VEG    N+F F S   AC AV 
Sbjct: 210 FERIKD-KDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVG 268

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
           + ++G Q+HG  +    + ++YV  +L DMYA+C +LDSAR      E  + VSWNS++ 
Sbjct: 269 SWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVN 328

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
            ++ +G   EAL LF +M    ++ D  T   +L        L + + +HS +VK G +G
Sbjct: 329 AYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDG 388

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
              V N+L+ MYA+  +L  A  VF+ ++D+DV++W S++T CA H   EE LK FS + 
Sbjct: 389 DVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLN 448

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
            S    D + ++++LSA AEL   E  +QVHA   K+G      + N+L+  YAKCG ++
Sbjct: 449 KSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLD 508

Query: 490 DANRVFDSM-HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
           DA R+F+ M + RDV +W++LI+G AQ G  KEA   + +M + G +P+++TF+G+L AC
Sbjct: 509 DAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTAC 568

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           S  G      +Y+  M+  YGI P  +H +C++DLL R+GKL EA   +DQM  EPD  +
Sbjct: 569 SRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIM 628

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           WK LL+A ++H D+E+G+RAA  +  ++P ++  YV L N+Y+ +G W + AR++K M++
Sbjct: 629 WKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRT 688

Query: 669 RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
            G++K PG SWV+   ++ +FI EDR HP   +IY+ ++ I + + +AGYVP
Sbjct: 689 SGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYAMLELIGMEMIKAGYVP 740



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 145/498 (29%), Positives = 239/498 (47%), Gaps = 39/498 (7%)

Query: 20  IGPARYTHNVGNSVKPASDL---NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAA 76
           +G  R  H      +  SDL   N  +  +S +G +D+   LFE++ D+D  +W ++IA 
Sbjct: 168 VGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAG 227

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYT 135
           +A                                 G ++EA ++F +M +EG + P+++ 
Sbjct: 228 FAQQ-------------------------------GFEMEALQVFREMIVEGSHHPNEFH 256

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
             +  R C   G  + GEQ HG +IK   D + +V   L DMYA+CK +  A   F    
Sbjct: 257 FGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRI- 315

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGA 255
           +  + V+W +++  YS  G   +A+  F +MR  G+  +  T   +L AC    A   G 
Sbjct: 316 EAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGR 375

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
            +H  ++  G + +V V ++L+ MYA+C DL SA  +    +  + V+WNS++   A+  
Sbjct: 376 LIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHN 435

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
             +E L LF  ++  +  +D  +  +VL+  A        K VH+   K G    + ++N
Sbjct: 436 HPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSN 495

Query: 376 ALIDMYAKQGNLDCAFMVFNLM-QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
            LID YAK G+LD A  +F +M  ++DV SW+SLI G A  G  +EA   FS MR  GI 
Sbjct: 496 TLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIR 555

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LVLVYAKCGCINDANR 493
           P+HV    +L+AC+ +  +  G   +++     G        S +V + A+ G + +A  
Sbjct: 556 PNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAAN 615

Query: 494 VFDSM-HTRDVITWTALI 510
             D M    D+I W  L+
Sbjct: 616 FIDQMPFEPDIIMWKTLL 633



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 206/430 (47%), Gaps = 20/430 (4%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSG-------FEANVYVQSALIDMYAKCGDLDSAR 290
           + ++++AC+ + +   G +VH  +++S           N  + + LI MY +C   DSAR
Sbjct: 47  YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
           ++ +     N VSW S+I    + G   +AL LF  M       D F   S +       
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           D+   + VH+  +K+       V NAL+ MY+K G +D  FM+F  ++DKD+ISW S+I 
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226

Query: 411 GCAYHGSYEEALKYFSDMRISGI-CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
           G A  G   EAL+ F +M + G   P+     S   AC  +   E+G+Q+H + +K    
Sbjct: 227 GFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 286

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
             L V  SL  +YA+C  ++ A   F  +   D+++W +++   +  G   EAL  + +M
Sbjct: 287 RDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEM 346

Query: 530 LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH--YAC--MIDLLG 585
              G +PD IT  GLL AC    +  +A  Y   +   Y +K G D     C  ++ +  
Sbjct: 347 RDSGLRPDGITVRGLLCAC----VGRDA-LYHGRLIHSYLVKLGLDGDVSVCNSLLSMYA 401

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ 645
           R   L  A  +  + + + D   W ++L+AC  H   E   +  + L + EP  ++  + 
Sbjct: 402 RCSDLSSAMDVFHE-IKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEP--SLDRIS 458

Query: 646 LSNMYSTAGK 655
           L+N+ S + +
Sbjct: 459 LNNVLSASAE 468



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 173/359 (48%), Gaps = 4/359 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           DRD +   ++   YA    L  A+  F      +  +W+S++  YS  GL  EA  LF +
Sbjct: 286 DRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSE 345

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+  G RP   T+  +L  C  +  L  G   H Y +K   D +  V   L+ MYA+C  
Sbjct: 346 MRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSD 405

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +  A  +F    D ++ V W +++T  +Q+ +  + ++ F  +       ++ +  ++L+
Sbjct: 406 LSSAMDVFHEIKD-QDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLS 464

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV- 302
           A A +   +   QVH     +G   +  + + LID YAKCG LD A RL E    + +V 
Sbjct: 465 ASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVF 524

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SW+S+IVG+A+ G+ KEA  LF +M +  I+ +  T+  VL   +    +N     +S++
Sbjct: 525 SWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIM 584

Query: 363 -VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYE 419
             + G    +   + ++D+ A+ G L  A    + M  + D+I W +L+     H   E
Sbjct: 585 EPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDME 643


>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
          Length = 870

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 272/741 (36%), Positives = 395/741 (53%), Gaps = 13/741 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N M++     G +  A ++F + P ++ F+W+ ++ GY   G   EA +L+++M   G R
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR 194

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  YT   VLR C      + G + H + ++  F     V+  LV MYAKC  I  A  +
Sbjct: 195 PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKV 254

Query: 191 FKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
           F    DG    + ++W  MI G+ +N      +E F  M    V+ N  T  S+  A   
Sbjct: 255 F----DGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGM 310

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           +S   F  ++HG  +  GF  +V   ++LI MY   G +  A ++    E  + +SW +M
Sbjct: 311 LSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAM 370

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I G+ + GF  +AL ++  M   ++  DD T  S L   A    L+    +H L    GF
Sbjct: 371 ISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGF 430

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG-CAYHGSYEEALKYFS 426
             Y  V NAL++MYAK  ++D A  VF  M +KDV+SW+S+I G C  H S+E AL YF 
Sbjct: 431 IRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFE-ALYYFR 489

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
            M +  + P+ V   + LSACA    L  G+++HA  L+ G  S   V N+L+ +Y KCG
Sbjct: 490 YM-LGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCG 548

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
             + A   F     +DV++W  ++ G   +G G  AL  ++QM+  G  PD +TFV LL 
Sbjct: 549 QTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLC 608

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ACS AG+       F  M + + I P   HYACM+DLL R GKL EA  L+++M  +PDA
Sbjct: 609 ACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDA 668

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
            VW ALL+ CR+H  +ELGE AA  + ELEP +   +V L ++Y+ AGKW   ARVRK M
Sbjct: 669 AVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTM 728

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFAL 726
           + +G+ ++ GCSWVE     H F+++D  HP   +I   +  I   +K  G+ P  +   
Sbjct: 729 REKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAPVESLED 788

Query: 727 HNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRH 786
             V E+    G   HSE+LAVAFGL+    G  I + KN   C  CH   K IS +  R 
Sbjct: 789 KEVSEDDILCG---HSERLAVAFGLINTTPGTTISVTKNRYTCQSCHVIFKAISEIVRRE 845

Query: 787 IILRDSNRFHHFKAGNCSCGD 807
           I +RD+ + H FK G+CSCGD
Sbjct: 846 ITVRDTKQLHCFKDGDCSCGD 866



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 124/253 (49%), Gaps = 12/253 (4%)

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           + NA++ M  + G +  A+ VF  M ++DV SW  ++ G    G  EEAL  +  M  +G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
           + PD      +L  C  +     G++VHA  L+ G    + V N+LV +YAKCG I  A 
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC---S 549
           +VFD M   D I+W A+I G  +N + +  L+ +  ML    +P+ +T   +  A    S
Sbjct: 253 KVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLS 312

Query: 550 HAGLAENARWYFESMDKVYGIKPGPDHYAC--MIDLLGRSGKLIEAKALLDQMVGEPDAT 607
             G A+    +  ++ + + I    D   C  +I +    G++ +A  +  +M  + DA 
Sbjct: 313 EVGFAKEMHGF--AVKRGFAI----DVAFCNSLIQMYTSLGRMGDAGKIFSRMETK-DAM 365

Query: 608 VWKALLSACRVHG 620
            W A++S    +G
Sbjct: 366 SWTAMISGYEKNG 378



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 9/203 (4%)

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
           HG   +AL        S   PD     ++   C     ++ G +  A          L +
Sbjct: 77  HGQLAQALWLLES---SPEPPDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRL 133

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
            N+++ +  + G I  A RVF  M  RDV +W  ++ G  + G  +EAL  Y +ML  G 
Sbjct: 134 GNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGM 193

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKV--YGIKPGPDHYACMIDLLGRSGKLIE 592
           +PD  TF  +L  C   G   + R   E    V  +G     D    ++ +  + G ++ 
Sbjct: 194 RPDVYTFPCVLRTC---GGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVA 250

Query: 593 AKALLDQMVGEPDATVWKALLSA 615
           A+ + D M    D   W A+++ 
Sbjct: 251 ARKVFDGM-AVTDCISWNAMIAG 272


>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Vitis vinifera]
          Length = 829

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 254/660 (38%), Positives = 388/660 (58%), Gaps = 10/660 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           +T N +I+ YA  G +R A K+F ET  ++  +W+++I G+ N G    A E    M+  
Sbjct: 35  YTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKSMKRY 94

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G+    Y+  ++L+  +  G ++ G+Q H   +K  ++ N F  + L+DMYAKC+ + +A
Sbjct: 95  GFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDA 154

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQ---NGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
             +FK   + +N V W  +I+GY+Q    G  F  ++C   M +EGVE +  TF  +LT 
Sbjct: 155 FEVFKSI-NIRNSVTWNALISGYAQVGDRGTAFWLLDC---MELEGVEIDDGTFAPLLTL 210

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS-EIDNEVS 303
                      QVH  I+  G  ++  V +A+I  Y++CG ++ A R+ + + E  + V+
Sbjct: 211 LDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVT 270

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WNSM+  +      +EA  LF +M     + D +TY SV++           KS+H L++
Sbjct: 271 WNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVI 330

Query: 364 KTGFEGYKFVNNALIDMYAKQ--GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           K G E    ++N+LI MY K    ++D A  +F  +++KD +SW S++TG +  G  E+A
Sbjct: 331 KRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDA 390

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           LK+F +MR   +  DH   S++L +C++L  L+ GQQVH + LKSG   +  V +SL+ +
Sbjct: 391 LKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFM 450

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           Y+KCG I DA + FD+      I W +LI G AQ+G+GK AL  +  M  R  K D+ITF
Sbjct: 451 YSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITF 510

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
           V +L ACSH GL E    + +SM+  YGI P  +HYACMIDLLGR+G+L EAKAL++ M 
Sbjct: 511 VAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMP 570

Query: 602 GEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
            EPDA VWK LL ACR  GD+EL  + A++L ELEP     YV LS+M+    +W + A 
Sbjct: 571 FEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFGHLRRWNEKAS 630

Query: 662 VRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPD 721
           +++LMK RG++K PG SW+E  ++V  F +EDR HP   +IY ++ E+M  I+   YV +
Sbjct: 631 IKRLMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHPNCEEIYLRLGELMEEIRRLDYVAN 690



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 241/477 (50%), Gaps = 10/477 (2%)

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG--KNHVAWTTM 206
           L R    H  AIK+    + +    ++  YAKC  I  A    KMF +   ++ V+W TM
Sbjct: 15  LYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIAS---KMFGETSQRDAVSWNTM 71

Query: 207 ITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF 266
           I G+   G    A+E  + M+  G   + ++F SIL   A V   + G QVH  ++  G+
Sbjct: 72  IAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGY 131

Query: 267 EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK 326
           E NV+  SAL+DMYAKC  ++ A  + +   I N V+WN++I G+A+ G    A  L   
Sbjct: 132 EGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDC 191

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
           M    ++IDD T+  +L              VH+ IVK G      V NA+I  Y++ G+
Sbjct: 192 MELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGS 251

Query: 387 LDCAFMVFN-LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
           ++ A  VF+  ++ +D+++W S++     +   EEA + F +M++ G  PD    +S++S
Sbjct: 252 IEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVIS 311

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK--CGCINDANRVFDSMHTRDV 503
           A  E +    G+ +H + +K G    + + NSL+ +Y K     +++A  +F+S+  +D 
Sbjct: 312 AAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDH 371

Query: 504 ITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFES 563
           ++W +++ G +Q+G  ++AL+F++ M ++    D+  F  +L +CS     +  +     
Sbjct: 372 VSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVL 431

Query: 564 MDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
           + K  G +P     + +I +  + G + +A+   D    +  +  W +L+     HG
Sbjct: 432 VLK-SGFEPNGFVASSLIFMYSKCGVIEDARKSFDA-TPKDSSIAWNSLIFGYAQHG 486



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 130/448 (29%), Positives = 216/448 (48%), Gaps = 40/448 (8%)

Query: 253 FGAQVHGCI-LSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
           + A V+ C+ + SG  A++Y  + +I  YAKCG++  A ++   +   + VSWN+MI GF
Sbjct: 16  YRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGF 75

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
              G  + AL   K M      +D +++ S+L   A    +   + VHS++VK G+EG  
Sbjct: 76  VNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNV 135

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
           F  +AL+DMYAK   ++ AF VF  +  ++ ++W +LI+G A  G    A      M + 
Sbjct: 136 FAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELE 195

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
           G+  D    + +L+   +  + +   QVHA  +K G  S  +V N+++  Y++CG I DA
Sbjct: 196 GVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDA 255

Query: 492 NRVFD-SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL---FA 547
            RVFD ++ TRD++TW +++     N + +EA Q + +M   G +PD  T+  ++   F 
Sbjct: 256 ERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFE 315

Query: 548 CSHAG------------------------LAENARWYFESMDKVYGI---KPGPDHYACM 580
            SH G                        +A   + + +SMD+   I       DH +  
Sbjct: 316 GSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWN 375

Query: 581 IDLLG--RSGKLIEAKALLDQMVGE---PDATVWKALLSACRVHGDLELGERAANNLFE- 634
             L G  +SG   +A    + M  +    D   + A+L +C     L+LG++    + + 
Sbjct: 376 SILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKS 435

Query: 635 -LEPMNAMPYVQLSNMYSTAGKWEDAAR 661
             EP N      L  MYS  G  EDA +
Sbjct: 436 GFEP-NGFVASSLIFMYSKCGVIEDARK 462



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 126/272 (46%), Gaps = 1/272 (0%)

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
           L  A   H L +K+G     +  N +I  YAK G +  A  +F     +D +SW ++I G
Sbjct: 15  LYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAG 74

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
               G++E AL++   M+  G   D     SIL   A +  +E GQQVH++ +K G   +
Sbjct: 75  FVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGN 134

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
           +   ++L+ +YAKC  + DA  VF S++ R+ +TW ALI G AQ G    A    D M  
Sbjct: 135 VFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMEL 194

Query: 532 RGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLI 591
            G + D  TF  LL       L +        + K +G+         +I      G + 
Sbjct: 195 EGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVK-HGLASDTTVCNAIITAYSECGSIE 253

Query: 592 EAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
           +A+ + D  +   D   W ++L+A  V+   E
Sbjct: 254 DAERVFDGAIETRDLVTWNSMLAAYLVNNQEE 285



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 123/261 (47%), Gaps = 33/261 (12%)

Query: 35  PASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP 94
           P S+   A+   S+S  +DEA  +FE + ++D  +WN+++  ++ S              
Sbjct: 339 PISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQS-------------- 384

Query: 95  FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ 154
                            GL  +A + F  M+ +      Y    VLR CS    LQ G+Q
Sbjct: 385 -----------------GLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQ 427

Query: 155 FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
            H   +K+ F+ N FV + L+ MY+KC  I +A   F   P   + +AW ++I GY+Q+G
Sbjct: 428 VHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSS-IAWNSLIFGYAQHG 486

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQ 273
            G  A++ F  M+   V+ +  TF ++LTAC+ +   + G      + S  G    +   
Sbjct: 487 RGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHY 546

Query: 274 SALIDMYAKCGDLDSARRLLE 294
           + +ID+  + G LD A+ L+E
Sbjct: 547 ACMIDLLGRAGRLDEAKALIE 567



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 9/149 (6%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           + +GF  +++I  Y+  G + +A+K F+ TP  +   W+SLI+GY+ +G    A +LF+ 
Sbjct: 438 EPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFL 497

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF-----HGYAIKTCFDLNAFVVTGLVDMY 178
           M+    +    T   VL  CS  GL++ G  F       Y I    +  A     ++D+ 
Sbjct: 498 MKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYAC----MIDLL 553

Query: 179 AKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
            +   + EA+ L +  P   + + W T++
Sbjct: 554 GRAGRLDEAKALIEAMPFEPDAMVWKTLL 582


>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
          Length = 694

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 262/642 (40%), Positives = 383/642 (59%), Gaps = 37/642 (5%)

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           N + W TM  G++ +     A++ +  M   G+  + +TFP +L +CA    R  G Q+H
Sbjct: 53  NLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIH 112

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS---------------------- 296
           G +L  GF+ ++YV ++LI MYA+ G L+ AR++ + S                      
Sbjct: 113 GHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIE 172

Query: 297 -------EIDNE--VSWNSMIVGFARQGFHKEALSLFKKMHA-RDIKIDDFTYPSVLNCF 346
                  EI  +  VSWN+MI G+   G +KEAL LFK+M    +++ D+ T  +V++  
Sbjct: 173 SAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSAC 232

Query: 347 ASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWT 406
           A +  +   + VHS I   GF     + NALID+Y+K G ++ A  +F+ + +KDVISW 
Sbjct: 233 AQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWN 292

Query: 407 SLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVF--- 463
           +LI G  +   Y+EAL  F +M  SG  P+ V + SIL ACA L  ++ G+ +H      
Sbjct: 293 TLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKK 352

Query: 464 LKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS-MHTRDVITWTALIMGCAQNGKGKEA 522
           LK    +  S+  SL+ +YAKCG I+ A +VFDS M  R + TW A+I G A +G+   A
Sbjct: 353 LKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAA 412

Query: 523 LQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMID 582
              + +M   G +PD ITFVGLL ACSH+G+ +  R  F SM + Y I P  +HY CMID
Sbjct: 413 FDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMID 472

Query: 583 LLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           LLG SG   EA+ +++ M  EPD  +W +LL AC++HG+LELGE  A  L ++EP N+  
Sbjct: 473 LLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGS 532

Query: 643 YVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE-PGCSWVETNSQVHIFISEDRGHPLRTD 701
           YV LSN+Y+ AG+W + A++R L+  +G++K+ PGCS +E +S VH FI  D+ HP   +
Sbjct: 533 YVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNRE 592

Query: 702 IYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIR 761
           IY  ++E+ +L++EAG+VPD +  L  +EEE +E  L +HSEKLA+AFGL++   G  + 
Sbjct: 593 IYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWREGALRHHSEKLAIAFGLISTKPGTKLT 652

Query: 762 IFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNC 803
           I KNLRVC +CH A K IS +Y R II RD  RF HF+ G C
Sbjct: 653 IMKNLRVCKNCHEATKLISKIYKREIIARDRTRFXHFRDGVC 694



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/514 (26%), Positives = 240/514 (46%), Gaps = 70/514 (13%)

Query: 55  AGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLD 114
           A  +F+ + + +   WNTM   +A S                                  
Sbjct: 42  AISVFDTIQEPNLLIWNTMFRGHALSSD-------------------------------P 70

Query: 115 IEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
           + A +L+  M   G  P  YT   +L+ C+   + + G+Q HG+ +K  FDL+ +V T L
Sbjct: 71  VSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSL 130

Query: 175 VDMYAK------CKCIFE-------------------------AEYLFKMFPDGKNHVAW 203
           + MYA+       + +F+                         A+ LF   P GK+ V+W
Sbjct: 131 ISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIP-GKDVVSW 189

Query: 204 TTMITGYSQNGYGFKAIECFRD-MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
             MI+GY + G   +A+E F++ M +  V  ++ T  ++++ACA   + + G  VH  I 
Sbjct: 190 NAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWIN 249

Query: 263 SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
             GF +N+ + +ALID+Y+K G++++A  L +     + +SWN++I G+     +KEAL 
Sbjct: 250 DHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALL 309

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI---VKTGFEGYKFVNNALID 379
           LF++M       +D T  S+L   A    ++  + +H  I   +K        +  +LID
Sbjct: 310 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLID 369

Query: 380 MYAKQGNLDCAFMVFN-LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
           MYAK G++D A  VF+  M ++ + +W ++I+G A HG    A   FS MR++GI PD +
Sbjct: 370 MYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDI 429

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAKCGCINDANRVFDS 497
               +LSAC+   +L+ G+ +     +    +  L     ++ +    G   +A  + ++
Sbjct: 430 TFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINT 489

Query: 498 MHTR-DVITWTALIMGCAQNGKGKEALQFYDQML 530
           M    D + W +L+  C  +G  +    F  +++
Sbjct: 490 MPMEPDGVIWCSLLKACKIHGNLELGESFAKKLI 523



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 144/485 (29%), Positives = 244/485 (50%), Gaps = 34/485 (7%)

Query: 16  RSKIIGPARYTHNVGNSVKPASDLN----RALVD-FSNSGEIDEAGQLFEKMSDRDGFTW 70
           +SKI    +  H  G+ +K   DL+     +L+  ++ +G +++A ++F+  S RD  ++
Sbjct: 101 KSKIRKEGQQIH--GHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSY 158

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ-MQLEGY 129
             +IA Y + G +  A+KLF+E P K+  +W+++I GY   G   EA ELF + M +   
Sbjct: 159 TALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNV 218

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           RP + T+  V+  C+    ++ G   H +     F  N  +V  L+D+Y+K   +  A  
Sbjct: 219 RPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACE 278

Query: 190 LFKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           LF    DG   K+ ++W T+I GY+      +A+  F++M   G   N  T  SIL ACA
Sbjct: 279 LF----DGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACA 334

Query: 247 AVSARDFGAQVHGCILS--SGFEANV-YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
            + A D G  +H  I     G   NV  +Q++LIDMYAKCGD+D+A+++ + S  +  +S
Sbjct: 335 HLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLS 394

Query: 304 -WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
            WN+MI GFA  G    A  +F +M    I+ DD T+  +L+  + +  L+  ++    I
Sbjct: 395 TWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRN----I 450

Query: 363 VKTGFEGYKFVNN-----ALIDMYAKQGNLDCAFMVFNLM-QDKDVISWTSLITGCAYHG 416
            ++   GY+          +ID+    G    A  + N M  + D + W SL+  C  HG
Sbjct: 451 FRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHG 510

Query: 417 SYEEALKYFSDM-RIS-GICPDHVVVSSILSACA---ELTVLEFGQQVHAVFLKSGGCSS 471
           + E    +   + +I  G    +V++S+I +A     E+  +        +  K  GCSS
Sbjct: 511 NLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSS 570

Query: 472 LSVDN 476
           + +D+
Sbjct: 571 IEIDS 575



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 131/296 (44%), Gaps = 37/296 (12%)

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDC---AFMVFNLMQDKDVISWTSLI 409
           ++ + +H+ ++KTG     +  + L++      + D    A  VF+ +Q+ +++ W ++ 
Sbjct: 2   SSVRXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMF 61

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
            G A       ALK +  M   G+ PD      +L +CA+  + + GQQ+H   LK G  
Sbjct: 62  RGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFD 121

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIM------------------ 511
             + V  SL+ +YA+ G + DA +VFD    RDV+++TALI                   
Sbjct: 122 LDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEI 181

Query: 512 -------------GCAQNGKGKEALQ-FYDQMLARGTKPDYITFVGLLFACSHAGLAENA 557
                        G  + G  KEAL+ F + M+    +PD  T V ++ AC+ +   E  
Sbjct: 182 PGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELG 241

Query: 558 RWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
           R +  S    +G          +IDL  + G++  A  L D +  + D   W  L+
Sbjct: 242 R-HVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNK-DVISWNTLI 295


>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
 gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 235/608 (38%), Positives = 366/608 (60%), Gaps = 31/608 (5%)

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG-------- 284
           S+   F  +L +C  + +   G QVH  I++SG   + ++ + L++ Y+K G        
Sbjct: 60  SDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVL 119

Query: 285 -----------------------DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEAL 321
                                  DL+SA++L +     N  +WN+MI G  +  F+K+AL
Sbjct: 120 FSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQAL 179

Query: 322 SLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMY 381
           SLFK+M+      D+FT  SVL   A    L   + VH+ ++K GFE    V ++L  MY
Sbjct: 180 SLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMY 239

Query: 382 AKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVS 441
            K G+L     +   M  + V++W +LI G A +G  EE L  ++ M+++G  PD +   
Sbjct: 240 IKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFV 299

Query: 442 SILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR 501
           S+LSAC+EL  L  GQQ+HA  +K+G  S L+V +SL+ +Y++ GC+ D+ + F      
Sbjct: 300 SVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENF 359

Query: 502 DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYF 561
           DV+ W+++I     +G+G+EAL+ + QM     + + +TF+ LL+ACSH+GL E    YF
Sbjct: 360 DVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYF 419

Query: 562 ESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGD 621
           + M K Y +KP  +HY C++DLLGR+G+L EA+ ++  M  +PD  +WK LL+AC++H +
Sbjct: 420 DLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKE 479

Query: 622 LELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVE 681
            E+ ER +  + +L+P++A  YV LSN++++A  W + +++RK M+ R +RKEPG SW+E
Sbjct: 480 AEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGISWLE 539

Query: 682 TNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYH 741
             + VH F   D+ HP   +I   + E+M  +K+ GYVP++   LH+++ E KE  LA+H
Sbjct: 540 LKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNLAHH 599

Query: 742 SEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAG 801
           SEK A+AF L+   +  PIR+ KNLRVC DCH A+K IS +  R II+RD++RFHHFK G
Sbjct: 600 SEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHFKDG 659

Query: 802 NCSCGDYW 809
            CSCG+YW
Sbjct: 660 ECSCGNYW 667



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 199/385 (51%), Gaps = 5/385 (1%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  L  +S  G+   +  LF  M  R+  ++N +I  Y   G L  A+KLF+E   +N  
Sbjct: 101 NHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIA 160

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCS-LKGLLQRGEQFHGY 158
           TW+++I G + +  + +A  LF +M   G+ P ++TL +VLR C+ L+ LL  G++ H  
Sbjct: 161 TWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLA-GQEVHAC 219

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFK 218
            +K  F+L++ V + L  MY K   + + E L K  P  +  VAW T+I G +QNG   +
Sbjct: 220 LLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPI-RTVVAWNTLIAGKAQNGCPEE 278

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID 278
            +  +  M++ G   ++ TF S+L+AC+ ++    G Q+H  ++ +G  + + V S+LI 
Sbjct: 279 VLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLIS 338

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
           MY++ G L+ + +     E  + V W+SMI  +   G  +EAL LF +M    ++ ++ T
Sbjct: 339 MYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVT 398

Query: 339 YPSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNL 396
           + S+L  C  S +     +    ++ K   +        ++D+  + G L+ A  M+ ++
Sbjct: 399 FLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSM 458

Query: 397 MQDKDVISWTSLITGCAYHGSYEEA 421
               D I W +L+  C  H   E A
Sbjct: 459 PVQPDGIIWKTLLAACKLHKEAEMA 483



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/432 (25%), Positives = 196/432 (45%), Gaps = 34/432 (7%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           PS ++  ++L+ C   G L  G+Q H   I +    + F+   L++ Y+K      +  L
Sbjct: 62  PSLFS--HLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVL 119

Query: 191 FKMFP------------------------------DGKNHVAWTTMITGYSQNGYGFKAI 220
           F   P                                +N   W  MI G +Q  +  +A+
Sbjct: 120 FSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQAL 179

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
             F++M   G   ++FT  S+L  CA + +   G +VH C+L  GFE +  V S+L  MY
Sbjct: 180 SLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMY 239

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
            K G L    +L++   I   V+WN++I G A+ G  +E L+ +  M     + D  T+ 
Sbjct: 240 IKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFV 299

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
           SVL+  +    L   + +H+ ++K G      V ++LI MY++ G L+ +   F   ++ 
Sbjct: 300 SVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENF 359

Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
           DV+ W+S+I    +HG  EEAL+ F  M    +  + V   S+L AC+   + E G +  
Sbjct: 360 DVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYF 419

Query: 461 AVFLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGK 518
            + +K       +     +V +  + G + +A  +  SM  + D I W  L+  C  + +
Sbjct: 420 DLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKE 479

Query: 519 GKEALQFYDQML 530
            + A +  ++++
Sbjct: 480 AEMAERISEEII 491



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 122/306 (39%), Gaps = 67/306 (21%)

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           +K   D   S I  D  + S +L +C +L  L  G+QVH++ + SGG     + N L+  
Sbjct: 47  IKQAYDTFTSEIWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNF 106

Query: 482 YAKCGC-------------------------------INDANRVFDSMHTRDVITWTALI 510
           Y+K G                                +  A ++FD M  R++ TW A+I
Sbjct: 107 YSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMI 166

Query: 511 MGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS-----------HAGLA----E 555
            G  Q    K+AL  + +M   G  PD  T   +L  C+           HA L     E
Sbjct: 167 AGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFE 226

Query: 556 NARWYFESMDKVYGIKPG--PDHYACMIDLLGRS----GKLIEAKA-------LLDQ--- 599
            +     S+  +Y IK G   D    +  +  R+      LI  KA       +L+Q   
Sbjct: 227 LSSVVGSSLAHMY-IKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNM 285

Query: 600 --MVG-EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYV-QLSNMYSTAGK 655
             M G  PD   + ++LSAC     L  G++    + +    + +  V  L +MYS +G 
Sbjct: 286 MKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGC 345

Query: 656 WEDAAR 661
            ED+ +
Sbjct: 346 LEDSIK 351


>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1134

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 250/651 (38%), Positives = 383/651 (58%), Gaps = 9/651 (1%)

Query: 166  LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            LN      L+DMY KC+    A  +F   P+ +N V+WT +++G+  NG    ++  F +
Sbjct: 402  LNLITSNYLIDMYCKCREQLIAYKVFDSMPE-RNVVSWTALMSGHVLNGDLNGSLSLFTE 460

Query: 226  MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
            M  +G+  N+FTF + L AC  ++A + G Q+HG  L  GFE  V V ++L+DMY+KCG 
Sbjct: 461  MGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGR 520

Query: 286  LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK--IDDFTYPSVL 343
            ++ A ++  +    + +SWN+MI G+   G+   AL+ F  M    IK   D+FT  S+L
Sbjct: 521  INEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLL 580

Query: 344  NCFASNIDLNNAKSVHSLIVKTGFE--GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
               +S   +   K +H  +V++GF       +  +L+D+Y K GNL  A   F+ +++K 
Sbjct: 581  KACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKT 640

Query: 402  VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
            +ISW+SLI G A  G + EA+  F  ++      D  V+SSI+   A+  +L+ G+Q+ A
Sbjct: 641  MISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQA 700

Query: 462  VFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKE 521
            + +K       SV NSLV +Y KCG +++A + F  M  +DVI+WT +I G  ++G GK+
Sbjct: 701  LVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKK 760

Query: 522  ALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMI 581
            A+  +++ML    +PD + ++ +L ACSH+G+ +     F  + +  GIKP  +HYAC++
Sbjct: 761  AVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVV 820

Query: 582  DLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAM 641
            DLLGR+G+L EAK L+D M  +P+  +W+ LLS CRVHGD+ELG+     L  ++  N  
Sbjct: 821  DLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGKNPA 880

Query: 642  PYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTD 701
             YV +SN+Y  AG W +    R+L   +G++KE G SWVE   +VH F S +  HPL   
Sbjct: 881  NYVMMSNLYGQAGYWNEQGNARELGSIKGLQKEAGMSWVEIEREVHFFRSGEDSHPLTLV 940

Query: 702  IYSKIDEI-MLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLT---LPQG 757
            I   + E+   L +E GYV  +   LH++++E KE  L  HSEKLA+   L T     +G
Sbjct: 941  IQETLKEVERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKG 1000

Query: 758  APIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDY 808
              IR+FKNLRVC DCH  +K +S +     ++RD+ RFH F+ G CSCGDY
Sbjct: 1001 KTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1051



 Score =  252 bits (644), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 154/466 (33%), Positives = 256/466 (54%), Gaps = 14/466 (3%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
            T N +I  Y        A K+F+  P +N  +W++L+ G+   G    +  LF +M  +
Sbjct: 405 ITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMGRQ 464

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G  P+++T    L+ C L   L++G Q HG+ +K  F++   V   LVDMY+KC  I EA
Sbjct: 465 GIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEA 524

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES--NQFTFPSILTAC 245
           E +F+    G++ ++W  MI GY   GYG +A+  F  M+   ++   ++FT  S+L AC
Sbjct: 525 EKVFRWMV-GRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKAC 583

Query: 246 AAVSARDFGAQVHGCILSSGFE--ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           ++      G Q+HG ++ SGF   ++  +  +L+D+Y KCG+L SAR+  +  +    +S
Sbjct: 584 SSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMIS 643

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           W+S+I+G+A++G   EA+ LFK++     +ID F   S++  FA    L   K + +L+V
Sbjct: 644 WSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVV 703

Query: 364 K--TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           K  +G E    V+N+L+DMY K G +D A   F  MQ KDVISWT +ITG   HG  ++A
Sbjct: 704 KLPSGLE--TSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKA 761

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL- 480
           +  F+ M    I PD V   ++LSAC+   +++ G+++ +  L++ G        + V+ 
Sbjct: 762 VSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVD 821

Query: 481 VYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGK---GKEA 522
           +  + G + +A  + D+M  + +V  W  L+  C  +G    GKE 
Sbjct: 822 LLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEV 867



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 204/419 (48%), Gaps = 48/419 (11%)

Query: 38  DLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK 96
           ++  +LVD +S  G I+EA ++F  M  R   +WN MIA Y ++G               
Sbjct: 506 EVGNSLVDMYSKCGRINEAEKVFRWMVGRSLISWNAMIAGYVHAG--------------- 550

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGY--RPSQYTLDNVLRLCSLKGLLQRGEQ 154
                    YG         A   F  MQ      RP ++TL ++L+ CS  G++  G+Q
Sbjct: 551 ---------YGS-------RALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMIYAGKQ 594

Query: 155 FHGYAIKTCFDL--NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
            HG+ +++ F    +A +   LVD+Y KC  +F A   F    + K  ++W+++I GY+Q
Sbjct: 595 IHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKE-KTMISWSSLILGYAQ 653

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI--LSSGFEANV 270
            G   +A+  F+ ++    + + F   SI+   A  +    G Q+   +  L SG E + 
Sbjct: 654 EGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLETS- 712

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
            V ++L+DMY KCG +D A +     ++ + +SW  MI G+ + G  K+A+S+F KM   
Sbjct: 713 -VSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRH 771

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT-GFEGYKFVNNALIDMYAKQGNLDC 389
           +I+ D+  Y +VL+  + +  +   + + S +++T G +        ++D+  + G L  
Sbjct: 772 NIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGRLKE 831

Query: 390 AFMVFNLMQDK-DVISWTSLITGCAYHGSYE---EALKYFSDMRISGICPDHVVVSSIL 444
           A  + + M  K +V  W +L++ C  HG  E   E  K    +RI G  P + V+ S L
Sbjct: 832 AKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKIL--LRIDGKNPANYVMMSNL 888



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 5/175 (2%)

Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT 500
           S +L  C    VLEF    ++ F  SG   +L   N L+ +Y KC     A +VFDSM  
Sbjct: 376 SHVLENC---YVLEFIIFTNSNFRLSGSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPE 432

Query: 501 RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWY 560
           R+V++WTAL+ G   NG    +L  + +M  +G  P+  TF   L AC      E     
Sbjct: 433 RNVVSWTALMSGHVLNGDLNGSLSLFTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQI 492

Query: 561 FESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
                K+ G +   +    ++D+  + G++ EA+ +   MVG      W A+++ 
Sbjct: 493 HGFCLKI-GFEMMVEVGNSLVDMYSKCGRINEAEKVFRWMVGR-SLISWNAMIAG 545



 Score = 44.3 bits (103), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 37/174 (21%), Positives = 67/174 (38%), Gaps = 33/174 (18%)

Query: 37  SDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF 95
           + ++ +LVD +   G +DEA + F +M  +D  +W  MI  Y   G  ++A  +FN    
Sbjct: 711 TSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFN---- 766

Query: 96  KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
                                      +M      P +     VL  CS  G+++ GE+ 
Sbjct: 767 ---------------------------KMLRHNIEPDEVCYLAVLSACSHSGMIKEGEEL 799

Query: 156 HGYAIKT-CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
               ++T            +VD+  +   + EA++L    P   N   W T+++
Sbjct: 800 FSKLLETQGIKPRVEHYACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLS 853


>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 243/612 (39%), Positives = 372/612 (60%), Gaps = 4/612 (0%)

Query: 201 VAWTTMITGYSQNGYGFKAIECFRDM--RVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           + W +M+  +  +    +A++ + +M  R   V  ++FTFPS+L  CA +     G  +H
Sbjct: 44  LTWNSMLRAFVNSNMPRRALQSYTEMLERSRNV-PDRFTFPSLLKGCALLLEFKVGKVLH 102

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
           G ++     +++Y+++ L++MYA CGDL SAR L E     N+V W SMI G+ +     
Sbjct: 103 GQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPN 162

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           EAL L+KKM       D+ T  ++++  A   DL     +HS I +   +    + +AL+
Sbjct: 163 EALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALV 222

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI-SGICPDH 437
           +MYAK G+L  A  VF+ + DKDV +W++LI G   +    EAL+ F ++   S + P+ 
Sbjct: 223 NMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNE 282

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
           V + +++SACA+L  LE G+ VH    ++    S+S++NSL+ +++KCG I+ A R+FDS
Sbjct: 283 VTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDS 342

Query: 498 MHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENA 557
           M  +D+I+W +++ G A +G G+EAL  +  M     +PD ITF+G+L ACSHAGL +  
Sbjct: 343 MSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEG 402

Query: 558 RWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACR 617
           +  F  ++ +YG++   +HY CM+DLL R+G L EA+  +  M  +PD  +W ++L ACR
Sbjct: 403 KKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACR 462

Query: 618 VHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGC 677
           V+ +LELGE AA  L ELEP N   Y+ LSN+Y+    W +  +VR+LM  +GI+K PGC
Sbjct: 463 VYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNEKGIQKTPGC 522

Query: 678 SWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIG 737
           S V  ++  H F++ D  HP   +I   + ++   +K  GYV D +  L N+++  KE  
Sbjct: 523 SSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLVGYVADTSEVLLNIDDNKKEES 582

Query: 738 LAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHH 797
           ++ HSEKLA+ +GLL    G  I I KNLRVC DCHT +K +S +Y R I LRD NRFHH
Sbjct: 583 VSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQRQITLRDRNRFHH 642

Query: 798 FKAGNCSCGDYW 809
           FK G+CSC DYW
Sbjct: 643 FKDGSCSCRDYW 654



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 240/460 (52%), Gaps = 25/460 (5%)

Query: 69  TWNTMIAAYANSGRLRE--AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL 126
           + N +IA   + G L    A  +F  T   +  TW+S++  + N  +   A + + +M L
Sbjct: 12  SLNKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEM-L 70

Query: 127 EGYR--PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
           E  R  P ++T  ++L+ C+L    + G+  HG  +K     + ++ T L++MYA C  +
Sbjct: 71  ERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDL 130

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
             A +LF+     +N V WT+MI+GY +N    +A+  ++ M  +G   ++ T  ++++A
Sbjct: 131 KSARFLFERMGH-RNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSA 189

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           CA +     G ++H  I     +    + SAL++MYAKCGDL +AR++ +     +  +W
Sbjct: 190 CAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAW 249

Query: 305 NSMIVGFARQGFHKEALSLFKKMH-ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           +++I G+ +     EAL LF+++    +++ ++ T  +V++  A   DL   + VH  I 
Sbjct: 250 SALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYIT 309

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           +T       +NN+LIDM++K G++D A  +F+ M  KD+ISW S++ G A HG   EAL 
Sbjct: 310 RTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALA 369

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ-------VHAVFLKSG--GCSSLSV 474
            F  M+ + + PD +    +L+AC+   +++ G++       ++ V LKS   GC     
Sbjct: 370 QFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGC----- 424

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
              +V +  + G + +A      M  + D   W +++  C
Sbjct: 425 ---MVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGAC 461



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 213/431 (49%), Gaps = 14/431 (3%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           GQ+ + M   D +   T++  YA  G L+ A+ LF     +N   W+S+I GY       
Sbjct: 103 GQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPN 162

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  L+ +M+ +G+ P + T+  ++  C+    L  G + H +  +    + A + + LV
Sbjct: 163 EALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALV 222

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR-VEGVESN 234
           +MYAKC  +  A  +F    D K+  AW+ +I GY +N    +A++ FR++     +  N
Sbjct: 223 NMYAKCGDLKTARQVFDQLSD-KDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPN 281

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
           + T  ++++ACA +   + G  VH  I  +    +V + ++LIDM++KCGD+D+A+R+ +
Sbjct: 282 EVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFD 341

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLN 353
                + +SWNSM+ G A  G  +EAL+ F  M   D++ D+ T+  VL  C  + +   
Sbjct: 342 SMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQE 401

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGC 412
             K  + +    G          ++D+  + G L  A     +M    D   W S++  C
Sbjct: 402 GKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGAC 461

Query: 413 AYHGSY---EEALKYFSDMRIS--GICPDHVVVSSILSACAELTVLEFGQQV--HAVFLK 465
             + +    EEA +   ++  +  G+   ++++S+I +       ++  +++       K
Sbjct: 462 RVYNNLELGEEAARCLLELEPTNDGV---YILLSNIYARRKMWNEVKKVRELMNEKGIQK 518

Query: 466 SGGCSSLSVDN 476
           + GCSS+ +DN
Sbjct: 519 TPGCSSVVIDN 529



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 85/369 (23%), Positives = 161/369 (43%), Gaps = 41/369 (11%)

Query: 20  IGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYA 78
           +G   ++H     +K  + L  ALV+ ++  G++  A Q+F+++SD+D + W+ +I  Y 
Sbjct: 198 VGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYV 257

Query: 79  NSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDN 138
            + R  EA +LF E            + G SN                   RP++ T+  
Sbjct: 258 KNNRSTEALQLFRE------------VAGGSN------------------MRPNEVTILA 287

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           V+  C+  G L+ G   H Y  +T    +  +   L+DM++KC  I  A+ +F      K
Sbjct: 288 VISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSM-SYK 346

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           + ++W +M+ G + +G G +A+  F  M+   ++ ++ TF  +LTAC+       G ++ 
Sbjct: 347 DLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLF 406

Query: 259 GCILS-SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIVG---FAR 313
             I +  G          ++D+  + G L  AR  +    +  + + W SM+     +  
Sbjct: 407 YEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNN 466

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
               +EA     ++       +D  Y  + N +A     N  K V  L+ + G +     
Sbjct: 467 LELGEEAARCLLELEP----TNDGVYILLSNIYARRKMWNEVKKVRELMNEKGIQKTPGC 522

Query: 374 NNALIDMYA 382
           ++ +ID  A
Sbjct: 523 SSVVIDNIA 531



 Score = 43.1 bits (100), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 83/206 (40%), Gaps = 47/206 (22%)

Query: 499 HTR--DVITWTALIMGCAQNGKGKEALQFYDQMLARGTK-PDYITFVGLLFACS------ 549
           HTR  DV+TW +++     +   + ALQ Y +ML R    PD  TF  LL  C+      
Sbjct: 37  HTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFK 96

Query: 550 --------------HAGL---------------AENARWYFESMDKVYGIKPGPDHYACM 580
                         H+ L                ++AR+ FE M     +      +  M
Sbjct: 97  VGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVV-----WTSM 151

Query: 581 IDLLGRSGKLIEAKALLDQMVGE---PDATVWKALLSACRVHGDLELGERAANNLFELE- 636
           I    ++    EA  L  +M  +   PD      L+SAC    DL +G +  +++ E++ 
Sbjct: 152 ISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDM 211

Query: 637 PMNAMPYVQLSNMYSTAGKWEDAARV 662
            + A+    L NMY+  G  + A +V
Sbjct: 212 KICAVLGSALVNMYAKCGDLKTARQV 237


>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 259/659 (39%), Positives = 382/659 (57%), Gaps = 6/659 (0%)

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF--PDGKNHVAWTTMITGY 210
           +Q H   + +    N F++T LV+  +    I  A  LF  F  PD      W  +I  Y
Sbjct: 73  DQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDV---FMWNAIIRSY 129

Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV 270
           S+N      +E +R MR  GV  + FTFP +L AC  +        +HG I+  GF ++V
Sbjct: 130 SRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDV 189

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
           +VQ+ L+ +YAKCG +  A+ + +       VSW S+I G+A+ G   EAL +F +M   
Sbjct: 190 FVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNN 249

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
            +K D     S+L  +    DL   +S+H  ++K G E    +  +L   YAK G +  A
Sbjct: 250 GVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVA 309

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
              F+ M+  +VI W ++I+G A +G  EEA+  F  M    I PD V V S + A A++
Sbjct: 310 KSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQV 369

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
             LE  Q +     KS   S + V+ SL+ +YAKCG +  A RVFD    +DV+ W+A+I
Sbjct: 370 GSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMI 429

Query: 511 MGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGI 570
           MG   +G+G EA+  Y  M   G  P+ +TF+GLL AC+H+GL +     F  M K + I
Sbjct: 430 MGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCM-KDFEI 488

Query: 571 KPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAAN 630
            P  +HY+C++DLLGR+G L EA A + ++  EP  +VW ALLSAC+++  + LGE AAN
Sbjct: 489 VPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAAN 548

Query: 631 NLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFI 690
            LF L+P N   YVQLSN+Y+++  W+  A VR LM+ +G+ K+ G S +E N ++  F 
Sbjct: 549 KLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFH 608

Query: 691 SEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFG 750
             D+ HP+  +I+ ++  +   +KE G+VP     LH++  E KE  L++HSE++AVA+G
Sbjct: 609 VGDKSHPMAKEIFDELQRLERRLKEVGFVPYTESVLHDLNYEEKEENLSFHSERIAVAYG 668

Query: 751 LLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           L++   G  +RI KNLR C +CH+A+K IS +  R II+RD+NRFHHFK G CSCGDYW
Sbjct: 669 LISTAPGTTLRITKNLRACVNCHSAIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/399 (33%), Positives = 214/399 (53%), Gaps = 11/399 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           +GF    ++   +N G++  A+KLF+E  + + F W+++I  YS   +  +  E++  M+
Sbjct: 87  NGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMR 146

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQ--FHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
             G  P  +T   VL+ C+   LL  G     HG  IK  F  + FV  GLV +YAKC  
Sbjct: 147 WTGVHPDGFTFPYVLKACT--ELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGH 204

Query: 184 IFEAEYLFKMFPDGKNH---VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
           I  A+ +F    DG  H   V+WT++I+GY+QNG   +A+  F  MR  GV+ +     S
Sbjct: 205 IGVAKVVF----DGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVS 260

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           IL A   V   + G  +HG ++  G E    +  +L   YAKCG +  A+   +  +  N
Sbjct: 261 ILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTN 320

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
            + WN+MI G+A+ G  +EA++LF  M +R+IK D  T  S +   A    L  A+ +  
Sbjct: 321 VIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDD 380

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
            + K+ +    FVN +LIDMYAK G+++ A  VF+   DKDV+ W+++I G   HG   E
Sbjct: 381 YVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWE 440

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           A+  +  M+ +G+ P+ V    +L+AC    +++ G ++
Sbjct: 441 AINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWEL 479



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 189/383 (49%), Gaps = 28/383 (7%)

Query: 43  LVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWS 102
           L+DF  S  I   GQ+ +     D F  N ++A YA  G +  AK +F+    +   +W+
Sbjct: 167 LLDFGLSCIIH--GQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWT 224

Query: 103 SLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT 162
           S+I GY+  G  +EA  +F QM+  G +P    L ++LR  +    L++G   HG+ IK 
Sbjct: 225 SIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKM 284

Query: 163 CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIEC 222
             +    ++  L   YAKC  +  A+  F       N + W  MI+GY++NG+  +A+  
Sbjct: 285 GLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKT-TNVIMWNAMISGYAKNGHAEEAVNL 343

Query: 223 FRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK 282
           F  M    ++ +  T  S + A A V + +    +   +  S + ++++V ++LIDMYAK
Sbjct: 344 FHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAK 403

Query: 283 CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
           CG ++ ARR+ + +   + V W++MI+G+   G   EA++L+  M    +  +D T+  +
Sbjct: 404 CGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGL 463

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN-----------ALIDMYAKQGNLD--C 389
           L   A N         HS +VK G+E +  + +            ++D+  + G L   C
Sbjct: 464 LT--ACN---------HSGLVKEGWELFHCMKDFEIVPRNEHYSCVVDLLGRAGYLGEAC 512

Query: 390 AFMVFNLMQDKDVISWTSLITGC 412
           AF +  +  +  V  W +L++ C
Sbjct: 513 AF-IMKIPIEPGVSVWGALLSAC 534


>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Brachypodium distachyon]
          Length = 614

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 239/584 (40%), Positives = 357/584 (61%), Gaps = 1/584 (0%)

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           + V G ++    + + +TAC    A   G QVH  ++ + +   VY+ + LI +Y +CG 
Sbjct: 32  LAVPGADARFHDYDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGA 91

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           LD AR +L+     N VSW +MI G+++ G H EAL LF +M     K ++FT  +VL  
Sbjct: 92  LDDARNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTS 151

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
              +  +   + VHSL+VKT FE + FV ++L+DMY K GN+  A  VF+++ ++D +S 
Sbjct: 152 CPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSC 211

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
           T++I+G A  G  +EAL  F  +  SG+  ++V  +++L++ + L  L +G+QVH + L+
Sbjct: 212 TAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILR 271

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
                 + + NSL+ +Y+KCG +  + RVFD+M  R  I+W A++MG  ++G G+E +Q 
Sbjct: 272 KELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQL 331

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
           +  M     KPD +T + +L  CSH GL +     F+ + K         HY C+IDLLG
Sbjct: 332 FRTM-TEEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLG 390

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ 645
           RSG+L +A  L++ M  EP   +W +LL ACRVH ++ +GE  A  L ++EP NA  YV 
Sbjct: 391 RSGQLQKALDLIEHMPFEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVI 450

Query: 646 LSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSK 705
           LSN+Y+ AG W+D  RVRKLM    + KEP  SW+  +  +H F S +R HP + DI +K
Sbjct: 451 LSNIYAAAGMWKDVFRVRKLMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAK 510

Query: 706 IDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKN 765
           I E+ + +K AG+VPD++  LH+V++E KE  L  HSEKLA+ FGL+  P G  I++ KN
Sbjct: 511 IKEVYVDVKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIQVMKN 570

Query: 766 LRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           LR+C DCH   K++S VY R I LRD NRFH  K G C+CGDYW
Sbjct: 571 LRICVDCHNFAKFVSKVYGREISLRDKNRFHLLKDGACTCGDYW 614



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 120/382 (31%), Positives = 208/382 (54%), Gaps = 14/382 (3%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +I  Y   G L +A+ + +  P +N  +W+++I GYS  G   EA ELF +M   G + +
Sbjct: 82  LIILYVRCGALDDARNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKAN 141

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
           ++TL  VL  C +   +Q+ EQ H   +KT F+ + FV + L+DMY K   I EA  +F 
Sbjct: 142 EFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFD 201

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
           M P+ ++ V+ T +I+GY+Q G   +A++ FR +   G++ N  TF ++LT+ + +++ +
Sbjct: 202 MLPE-RDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLN 260

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
           +G QVHG IL       + +Q++LIDMY+KCG L  +RR+ +     + +SWN+M++G+ 
Sbjct: 261 YGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYG 320

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
           R G  +E + LF+ M   ++K D  T  +VL+  +    ++    +  LIVK   E    
Sbjct: 321 RHGIGQEVVQLFRTM-TEEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVK---EQNAV 376

Query: 373 VN----NALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSY---EEALKY 424
           ++      +ID+  + G L  A  +   M  +   + W SL+  C  H +    E   + 
Sbjct: 377 IHIGHYGCVIDLLGRSGQLQKALDLIEHMPFEPTPAIWGSLLGACRVHINVSVGEVVAQK 436

Query: 425 FSDMRISGICPDHVVVSSILSA 446
             DM   G   ++V++S+I +A
Sbjct: 437 LLDME-PGNAGNYVILSNIYAA 457



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 183/329 (55%), Gaps = 2/329 (0%)

Query: 137 DNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD 196
           D  +  C  +  L  G Q H + +K  +    ++ T L+ +Y +C  + +A  +    P+
Sbjct: 45  DAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPE 104

Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
            +N V+WT MI+GYSQ+G   +A+E F  M   G ++N+FT  ++LT+C    +     Q
Sbjct: 105 -RNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQ 163

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           VH  ++ + FE++++V S+L+DMY K G++  AR++ +     + VS  ++I G+A+ G 
Sbjct: 164 VHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGL 223

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
             EAL LF+++++  ++ +  T+ ++L   +    LN  K VH LI++     +  + N+
Sbjct: 224 DDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNS 283

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           LIDMY+K G L  +  VF+ M  +  ISW +++ G   HG  +E ++ F  M    + PD
Sbjct: 284 LIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTM-TEEVKPD 342

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLK 465
            V + ++LS C+   +++ G  +  + +K
Sbjct: 343 SVTLLAVLSGCSHGGLVDEGLDIFDLIVK 371



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 125/248 (50%), Gaps = 14/248 (5%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  ++++  Y  SG ++EA+K+F+  P ++  + +++I GY+  GLD EA +LF Q+   
Sbjct: 178 FVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSS 237

Query: 128 GYRPSQYTLDNVLRLCSLKGL--LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           G + +  T   +L   SL GL  L  G+Q HG  ++        +   L+DMY+KC  + 
Sbjct: 238 GMQCNYVTFTTLL--TSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLL 295

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            +  +F   P  ++ ++W  M+ GY ++G G + ++ FR M  E V+ +  T  ++L+ C
Sbjct: 296 YSRRVFDNMPQ-RSAISWNAMLMGYGRHGIGQEVVQLFRTM-TEEVKPDSVTLLAVLSGC 353

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQ----SALIDMYAKCGDLDSARRLLEYSEID-N 300
           +     D G  +   I+    E N  +       +ID+  + G L  A  L+E+   +  
Sbjct: 354 SHGGLVDEGLDIFDLIVK---EQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMPFEPT 410

Query: 301 EVSWNSMI 308
              W S++
Sbjct: 411 PAIWGSLL 418


>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
          Length = 956

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 270/826 (32%), Positives = 441/826 (53%), Gaps = 86/826 (10%)

Query: 34  KPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGF-----TWNTMIAAYANSGRLREAK 87
           +P + L  ++V  +  + + +EA  LF +M   D F       N+++  YA +G  + A 
Sbjct: 167 RPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAA 226

Query: 88  KLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKG 147
            LF++ P K+  +WS++I  Y+N     EA  LF +M  + + P+  T+ + L+ C++  
Sbjct: 227 NLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSR 286

Query: 148 LLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
            L+ G++ H  A+                                     K+ V+W  ++
Sbjct: 287 NLEEGKKIHKIAV------------------------------------WKDVVSWVALL 310

Query: 208 TGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFE 267
           +GY+QNG  +K++  FR+M  +G++ +      IL A + +        +HG ++ SGF 
Sbjct: 311 SGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFN 370

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM 327
           +NV+V ++LI++Y+KCG L  A +L +   + + V W+SMI  +   G   EAL +F +M
Sbjct: 371 SNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQM 430

Query: 328 --------HARDIKIDDFTYP--SVLNC-FASNID------------------------- 351
                       I +     P  ++ +C  A++I                          
Sbjct: 431 IQVMQGITSCYQISMQPQVQPPLAITSCTLATHIPWKVKAFYMRAHFRWLGHFWEIFPTY 490

Query: 352 -LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
               A    S I   G +    +      MY     +D A +VF  + +     W  +I 
Sbjct: 491 PFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIR 550

Query: 411 GCAYHGSYEEALKYFSDMRI-------SGICPDHVVVSSILSACAELTVLEFGQQVHAVF 463
           G A  G +  +L+ +S M         SG+ P+ V + S+L AC  L  L  G+  H+  
Sbjct: 551 GFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYV 610

Query: 464 LKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEAL 523
           +++G    + V  +++ +Y+KCG ++ A  +FD    +D++ W+A+I     +G G++A+
Sbjct: 611 IQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAI 670

Query: 524 QFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDL 583
             +DQM+  G +P ++TF  +L ACSH+GL E  + YF+ M + + I     +YACM+DL
Sbjct: 671 DLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDL 730

Query: 584 LGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPY 643
           LGR+G+L EA  L++ M  EPDA++W +LL ACR+H +L+L E+ A++LF L+P++A  +
Sbjct: 731 LGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYH 790

Query: 644 VQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIY 703
           V LSN+Y+   +W +  +VRK+M  RG  K  G S VE ++QVH F   DR HP    +Y
Sbjct: 791 VLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLY 850

Query: 704 SKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIF 763
           +K++E+   +K  GYVP  +F LH++EEE KE  L+YHSE+LA+AFGL+    G  +RI 
Sbjct: 851 AKLEELAAPMKHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRIT 910

Query: 764 KNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           KNLR+CGDCH A+K IS +  R I++RD +RFH F+ G CSCGDYW
Sbjct: 911 KNLRICGDCHNAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGDYW 956



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 163/662 (24%), Positives = 288/662 (43%), Gaps = 97/662 (14%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
           Q+F+     D F    + + YA    L+ A+K+F+ETP  N   W+S +  Y       E
Sbjct: 26  QVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEE 85

Query: 117 AFELFWQMQ-LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT-CFDLNAFVVTGL 174
              LF  M    G  P  +T+   L+ C+   +L+ G+  HG+A K      + FV + L
Sbjct: 86  TLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSAL 145

Query: 175 VDMYAKCKCIFEAEYLFKMF--PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV---- 228
           V++Y+KC  + EA  +F+ F  PD    V WT+M+TGY QN    +A+  F  M +    
Sbjct: 146 VELYSKCGQMGEALKVFEEFQRPDT---VLWTSMVTGYQQNNDPEEALALFSQMVMMDCF 202

Query: 229 -------------------EGVESNQFT-FP-------SILTACAAVS-ARDFGAQVHGC 260
                              E + +N F+  P       S + AC A + A +    +   
Sbjct: 203 DGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHE 262

Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEA 320
           ++   FE N     + +   A   +L+  +++ + +   + VSW +++ G+A+ G   ++
Sbjct: 263 MIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVVSWVALLSGYAQNGMAYKS 322

Query: 321 LSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDM 380
           + +F+ M +  I+ D      +L   +       A  +H  +V++GF    FV  +LI++
Sbjct: 323 MGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIEL 382

Query: 381 YAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM--RISGIC---- 434
           Y+K G+L  A  +F  M  +DV+ W+S+I     HG   EAL+ F  M   + GI     
Sbjct: 383 YSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQGITSCYQ 442

Query: 435 --------PDHVVVSSILSACAELTVLEFGQQVHAVFL------------KSGGCSS--- 471
                   P   + S  L+      V  F  + H  +L            ++   S    
Sbjct: 443 ISMQPQVQPPLAITSCTLATHIPWKVKAFYMRAHFRWLGHFWEIFPTYPFQAADMSKSNI 502

Query: 472 ----LSVDNSLV----LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEAL 523
               L  D+ ++    ++Y     I+ A+ VF+ +       W  +I G A +G+   +L
Sbjct: 503 FAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSL 562

Query: 524 QFYDQMLARGTKPD-------YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH 576
           + Y +M+ +G KPD        ++ + +L AC + G      W+       Y I+ G + 
Sbjct: 563 ELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHS-----YVIQTGFEF 617

Query: 577 ----YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNL 632
                  ++D+  + G L  A+ L D+  G+ D   W A++++  +HG      R A +L
Sbjct: 618 DILVATAIMDMYSKCGSLDLARCLFDETAGK-DLVCWSAMIASYGIHGH----GRKAIDL 672

Query: 633 FE 634
           F+
Sbjct: 673 FD 674



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 211/473 (44%), Gaps = 82/473 (17%)

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQN 213
           Q H    KT    + F  T L  +YAKC  +  A  +F   P    H+ W + +  Y + 
Sbjct: 22  QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHL-WNSTLRSYCRE 80

Query: 214 GYGFKAIECFRDMRVEGVES-NQFTFPSILTACAAVSARDFGAQVHGCILSSG-FEANVY 271
               + +  F  M     E+ + FT P  L ACA +   + G  +HG    +    ++++
Sbjct: 81  KQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMF 140

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD 331
           V SAL+++Y+KCG +  A ++ E  +  + V W SM+ G+ +    +EAL+LF +M    
Sbjct: 141 VGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQM---- 196

Query: 332 IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
                     +++CF  ++ L N+                     L+++YAK G    A 
Sbjct: 197 ---------VMMDCFDGDLPLVNS---------------------LLNLYAKTGCEKIAA 226

Query: 392 MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELT 451
            +F+ M +KDVISW+++I   A + +  EAL  F +M      P+ V V S L ACA   
Sbjct: 227 NLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSR 286

Query: 452 VLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIM 511
            LE G+++H + +                                    +DV++W AL+ 
Sbjct: 287 NLEEGKKIHKIAV-----------------------------------WKDVVSWVALLS 311

Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIK 571
           G AQNG   +++  +  ML+ G +PD +  V +L A S  G+ + A          Y ++
Sbjct: 312 GYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHG-----YVVR 366

Query: 572 PGPDHY----ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
            G +      A +I+L  + G L +A  L   M+   D  +W ++++A  +HG
Sbjct: 367 SGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVR-DVVIWSSMIAAYGIHG 418



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 131/284 (46%), Gaps = 14/284 (4%)

Query: 353 NNAKSV---HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
           NN +SV   HS + KTG     F    L  +YAK  +L  A  VF+     +V  W S +
Sbjct: 15  NNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTL 74

Query: 410 TGCAYHGSYEEALKYFSDMR-ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
                   +EE L+ F  M   +G  PD+  +   L ACA L +LE G+ +H    K+  
Sbjct: 75  RSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDE 134

Query: 469 CSS-LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYD 527
             S + V ++LV +Y+KCG + +A +VF+     D + WT+++ G  QN   +EAL  + 
Sbjct: 135 IGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFS 194

Query: 528 QMLARGTKPDYITFV-GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGR 586
           QM+        +  V  LL   +  G  + A   F  M +   I      ++ MI     
Sbjct: 195 QMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVIS-----WSTMIACYAN 249

Query: 587 SGKLIEAKALLDQMVG---EPDATVWKALLSACRVHGDLELGER 627
           +    EA  L  +M+    EP++    + L AC V  +LE G++
Sbjct: 250 NEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKK 293



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 21/218 (9%)

Query: 2   FKLDFKILNFSLRCRSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEK 61
           F  D + L+ SL   SK++       N G      S L+  L+   N G + + G+ F  
Sbjct: 552 FATDGRFLS-SLELYSKMMEKGLKPDNSGVIPNRVSILS-VLLACGNLGALRK-GEWFHS 608

Query: 62  MSDRDGFTWNTMIAA-----YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
              + GF ++ ++A      Y+  G L  A+ LF+ET  K+   WS++I  Y  +G   +
Sbjct: 609 YVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRK 668

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG--- 173
           A +LF QM   G RPS  T   VL  CS  GLL+ G+ +  + + T      FV+     
Sbjct: 669 AIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMY--FQLMT----EEFVIARKLS 722

Query: 174 ----LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
               +VD+  +   + EA  L +  P   +   W +++
Sbjct: 723 NYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLL 760


>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
 gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 238/586 (40%), Positives = 365/586 (62%), Gaps = 2/586 (0%)

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M ++G E     +  +L  C    A   G +VH  ++ + +   VY+ + LI +Y KC  
Sbjct: 1   MAIQGPEIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCEC 60

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           L  AR + +     N VSW +MI G++++GF  EAL LF +M   D + ++FT+ +VL+ 
Sbjct: 61  LGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSS 120

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
                     + +HS I K  +E + FV ++L+DMYAK G +  A  VF  + ++DV+S 
Sbjct: 121 CTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSC 180

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
           T++I+G A  G  EEAL+ F  ++  G+  ++V  +S+L+A + L  L+ G+QVH+  L+
Sbjct: 181 TAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLR 240

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
                 + + NSL+ +Y+KCG +N A ++F++M  R VI+W A+++G +++GKG E ++ 
Sbjct: 241 CELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKL 300

Query: 526 YDQMLARG-TKPDYITFVGLLFACSHAGLAENARWYF-ESMDKVYGIKPGPDHYACMIDL 583
           +  M      KPD +TF+ +L  CSH GL +     F E M+    I+ G +HY C+IDL
Sbjct: 301 FKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDL 360

Query: 584 LGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPY 643
           LGR+G++ EA  L+ +M  EP A +W +LL ACRVH +  +GE     L E+EP NA  Y
Sbjct: 361 LGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNY 420

Query: 644 VQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIY 703
           V LSN+Y++AG+WED   VR+LM  + + KEPG SW+E +  +H F + DR HP R +++
Sbjct: 421 VILSNLYASAGRWEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVF 480

Query: 704 SKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIF 763
            K+ E+++  KE+GYVPD +  L++V+EE KE  L  HSEKLA+AFGL++  +G P+R+ 
Sbjct: 481 LKVRELLVKFKESGYVPDQSCVLYDVDEEQKEKILLGHSEKLALAFGLISTSEGVPLRVI 540

Query: 764 KNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           KNLR+C DCH   K++S VY R + +RD NRFHH   G CSCGDYW
Sbjct: 541 KNLRICVDCHNFAKFVSKVYGRQVSIRDKNRFHHVAGGICSCGDYW 586



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 109/311 (35%), Positives = 178/311 (57%), Gaps = 2/311 (0%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           +L  C  K  ++ G++ H + IKTC+    ++ T L+ +Y KC+C+  A ++F    + +
Sbjct: 16  LLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRE-R 74

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           N V+WT MI+GYSQ G+  +A+  F  M     E N+FTF ++L++C   S  + G Q+H
Sbjct: 75  NVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIH 134

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
             I    +E +++V S+L+DMYAK G +  AR + E     + VS  ++I G+A+ G  +
Sbjct: 135 SHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDE 194

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           EAL LF ++    +  +  TY S+L   +    L++ K VHS +++     Y  + N+LI
Sbjct: 195 EALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLI 254

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG-ICPDH 437
           DMY+K GNL+ A  +FN M  + VISW +++ G + HG   E +K F  MR    + PD 
Sbjct: 255 DMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDS 314

Query: 438 VVVSSILSACA 448
           V   ++LS C+
Sbjct: 315 VTFLAVLSGCS 325



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 220/425 (51%), Gaps = 21/425 (4%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +I  Y     L  A+ +F+E   +N  +W+++I GYS  G   EA  LF QM      P+
Sbjct: 51  LIILYTKCECLGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPN 110

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
           ++T   VL  C+     + G Q H +  K  ++ + FV + L+DMYAK   I EA  +F+
Sbjct: 111 EFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFE 170

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
             P+ ++ V+ T +I+GY+Q G   +A+E F  ++ EG+ SN  T+ S+LTA + ++A D
Sbjct: 171 CLPE-RDVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALD 229

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G QVH  +L       V +Q++LIDMY+KCG+L+ AR++     +   +SWN+M+VG++
Sbjct: 230 HGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYS 289

Query: 313 RQGFHKEALSLFKKMHARD-IKIDDFTYPSVLN-CFASNIDLNNAKSVHSLI-----VKT 365
           + G   E + LFK M   + +K D  T+ +VL+ C    ++    +    ++     ++ 
Sbjct: 290 KHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEA 349

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALKY 424
           G E Y      +ID+  + G ++ AF +   M  +     W SL+  C  H +    +  
Sbjct: 350 GIEHY----GCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTN--IGE 403

Query: 425 FSDMRISGICPD----HVVVSSILSACAELTVLEFGQQV--HAVFLKSGGCSSLSVDNSL 478
           F   R+  I P+    +V++S++ ++      +   +++      +K  G S + +D ++
Sbjct: 404 FVGCRLLEIEPENAGNYVILSNLYASAGRWEDVRNVRELMMEKAVIKEPGRSWIELDQTI 463

Query: 479 VLVYA 483
              YA
Sbjct: 464 HTFYA 468



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 134/256 (52%), Gaps = 5/256 (1%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
            +F++  +   F  ++++  YA +GR+ EA+ +F   P ++  + +++I GY+  GLD E
Sbjct: 136 HIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEE 195

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
           A ELF ++Q EG   +  T  ++L   S    L  G+Q H + ++        +   L+D
Sbjct: 196 ALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLID 255

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQ 235
           MY+KC  +  A  +F   P  +  ++W  M+ GYS++G G + ++ F+ MR E  V+ + 
Sbjct: 256 MYSKCGNLNYARKIFNNMPV-RTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDS 314

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSG--FEANVYVQSALIDMYAKCGDLDSARRLL 293
            TF ++L+ C+     D G ++   +++ G   EA +     +ID+  + G ++ A  L+
Sbjct: 315 VTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELI 374

Query: 294 EYSEIDNEVS-WNSMI 308
           +    +   + W S++
Sbjct: 375 KKMPFEPTAAIWGSLL 390



 Score = 44.3 bits (103), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 6/92 (6%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN----ET 93
           L  +L+D +S  G ++ A ++F  M  R   +WN M+  Y+  G+  E  KLF     E 
Sbjct: 249 LQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREEN 308

Query: 94  PFK-NFFTWSSLIYGYSNYGLDIEAFELFWQM 124
             K +  T+ +++ G S+ GL+ +  E+F +M
Sbjct: 309 KVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEM 340


>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 243/612 (39%), Positives = 373/612 (60%), Gaps = 4/612 (0%)

Query: 201 VAWTTMITGYSQNGYGFKAIECFRDM--RVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           + W +M+  +  +    +A++ + +M  R   V  ++FTFPS+L  CA +     G  +H
Sbjct: 44  LTWNSMLRAFVNSNMPRRALQSYTEMLERSRNV-PDRFTFPSLLKGCALLLEFKVGKVLH 102

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
           G ++     +++Y+++ L++MYA CGDL SAR L E     N+V W SMI G+ +     
Sbjct: 103 GQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPN 162

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           EAL L+KKM       D+ T  ++++  A   DL     +HS I +   +    + +AL+
Sbjct: 163 EALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALV 222

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI-SGICPDH 437
           +MYAK G+L  A  VF+ + DKDV +W++LI G   +    EAL+ F ++   S + P+ 
Sbjct: 223 NMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNE 282

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
           V + +++SACA+L  LE G+ VH    ++    S+S++NSL+ +++KCG I+ A R+FDS
Sbjct: 283 VTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDS 342

Query: 498 MHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENA 557
           M  +D+I+W +++ G A +G G+EAL  +  M     +PD ITF+G+L ACSHAGL +  
Sbjct: 343 MSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEG 402

Query: 558 RWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACR 617
           +  F  ++ +YG++   +HY CM+DLL R+G L EA+  +  M  +PD  +W ++L ACR
Sbjct: 403 KKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACR 462

Query: 618 VHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGC 677
           V+ +LELGE AA  L +LEP N   Y+ LSN+Y+    W +  +VR+LM  +GI+K PGC
Sbjct: 463 VYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGIQKTPGC 522

Query: 678 SWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIG 737
           S V  ++  H F++ D  HP   +I   + ++   +K AGYV D +  L N+++  KE  
Sbjct: 523 SSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVADTSEVLLNIDDNKKEES 582

Query: 738 LAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHH 797
           ++ HSEKLA+ +GLL    G  I I KNLRVC DCHT +K +S +Y R I LRD NRFHH
Sbjct: 583 VSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQRQITLRDRNRFHH 642

Query: 798 FKAGNCSCGDYW 809
           FK G+CSC DYW
Sbjct: 643 FKDGSCSCRDYW 654



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 134/475 (28%), Positives = 246/475 (51%), Gaps = 28/475 (5%)

Query: 69  TWNTMIAAYANSGRLRE--AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL 126
           + N +IA   + G L    A  +F  T   +  TW+S++  + N  +   A + + +M L
Sbjct: 12  SLNKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEM-L 70

Query: 127 EGYR--PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
           E  R  P ++T  ++L+ C+L    + G+  HG  +K     + ++ T L++MYA C  +
Sbjct: 71  ERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDL 130

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
             A +LF+     +N V WT+MI+GY +N    +A+  ++ M  +G   ++ T  ++++A
Sbjct: 131 KSARFLFERMGH-RNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSA 189

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           CA +     G ++H  I     +    + SAL++MYAKCGDL +AR++ +     +  +W
Sbjct: 190 CAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAW 249

Query: 305 NSMIVGFARQGFHKEALSLFKKMH-ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           +++I G+ +     EAL LF+++    +++ ++ T  +V++  A   DL   + VH  I 
Sbjct: 250 SALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYIT 309

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           +T       +NN+LIDM++K G++D A  +F+ M  KD+ISW S++ G A HG   EAL 
Sbjct: 310 RTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALA 369

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ-------VHAVFLKSG--GCSSLSV 474
            F  M+ + + PD +    +L+AC+   +++ G++       ++ V LKS   GC     
Sbjct: 370 QFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGC----- 424

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGK---GKEALQF 525
              +V +  + G + +A      M  + D   W +++  C        G+EA +F
Sbjct: 425 ---MVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARF 476



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 220/449 (48%), Gaps = 36/449 (8%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           GQ+ + M   D +   T++  YA  G L+ A+ LF     +N   W+S+I GY       
Sbjct: 103 GQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPN 162

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  L+ +M+ +G+ P + T+  ++  C+    L  G + H +  +    + A + + LV
Sbjct: 163 EALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALV 222

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR-VEGVESN 234
           +MYAKC  +  A  +F    D K+  AW+ +I GY +N    +A++ FR++     +  N
Sbjct: 223 NMYAKCGDLKTARQVFDKLSD-KDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPN 281

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
           + T  ++++ACA +   + G  VH  I  +    +V + ++LIDM++KCGD+D+A+R+ +
Sbjct: 282 EVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFD 341

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
                + +SWNSM+ GFA  G  +EAL+ F+ M   D++ D+ T+  VL   +       
Sbjct: 342 SMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACS------- 394

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
               H+ +V+ G + +  +  AL  +  K  +  C           D++    L+     
Sbjct: 395 ----HAGLVQEGKKLFYEI-EALYGVRLKSEHYGCMV---------DLLCRAGLLA---- 436

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
                EA ++   +R+  + PD  +  S+L AC     LE G++  A FL     ++  V
Sbjct: 437 -----EAREF---IRVMPLQPDGAIWGSMLGACRVYNNLELGEEA-ARFLLKLEPTNDGV 487

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDV 503
              L  +YAK    N+  +V + M+ + +
Sbjct: 488 YILLSNIYAKRKMWNEVKKVRELMNEKGI 516



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 88/369 (23%), Positives = 163/369 (44%), Gaps = 41/369 (11%)

Query: 20  IGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYA 78
           +G   ++H     +K  + L  ALV+ ++  G++  A Q+F+K+SD+D + W+ +I  Y 
Sbjct: 198 VGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYV 257

Query: 79  NSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDN 138
            + R  EA +LF E            + G SN                   RP++ T+  
Sbjct: 258 KNNRSTEALQLFRE------------VAGGSN------------------MRPNEVTILA 287

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           V+  C+  G L+ G   H Y  +T    +  +   L+DM++KC  I  A+ +F      K
Sbjct: 288 VISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSM-SYK 346

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           + ++W +M+ G++ +G G +A+  FR M+   ++ ++ TF  +LTAC+       G ++ 
Sbjct: 347 DLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLF 406

Query: 259 GCILS-SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIVG---FAR 313
             I +  G          ++D+  + G L  AR  +    +  + + W SM+     +  
Sbjct: 407 YEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNN 466

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
               +EA     K+       +D  Y  + N +A     N  K V  L+ + G +     
Sbjct: 467 LELGEEAARFLLKLEP----TNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGIQKTPGC 522

Query: 374 NNALIDMYA 382
           ++ +ID  A
Sbjct: 523 SSVVIDNIA 531



 Score = 43.1 bits (100), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 83/206 (40%), Gaps = 47/206 (22%)

Query: 499 HTR--DVITWTALIMGCAQNGKGKEALQFYDQMLARGTK-PDYITFVGLLFACS------ 549
           HTR  DV+TW +++     +   + ALQ Y +ML R    PD  TF  LL  C+      
Sbjct: 37  HTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFK 96

Query: 550 --------------HAGL---------------AENARWYFESMDKVYGIKPGPDHYACM 580
                         H+ L                ++AR+ FE M     +      +  M
Sbjct: 97  VGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVV-----WTSM 151

Query: 581 IDLLGRSGKLIEAKALLDQMVGE---PDATVWKALLSACRVHGDLELGERAANNLFELE- 636
           I    ++    EA  L  +M  +   PD      L+SAC    DL +G +  +++ E++ 
Sbjct: 152 ISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDM 211

Query: 637 PMNAMPYVQLSNMYSTAGKWEDAARV 662
            + A+    L NMY+  G  + A +V
Sbjct: 212 KICAVLGSALVNMYAKCGDLKTARQV 237


>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 591

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 221/510 (43%), Positives = 327/510 (64%)

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           N  +WN++I G+A       A   +++M    ++ D  TYP +L   + ++++   +++H
Sbjct: 82  NVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIH 141

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
           S+ ++ GFE   FV N+L+ +YA  G+ + A+ VF LM+++D+++W S+I G A +G   
Sbjct: 142 SVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPN 201

Query: 420 EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
           EAL  F +M + G+ PD   V S+LSA AEL  LE G++VH   LK G   +  V NSL+
Sbjct: 202 EALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLL 261

Query: 480 LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
            +YAKCG I +A RVF  M  R+ ++WT+LI+G A NG G+EAL+ + +M  +G  P  I
Sbjct: 262 DLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEI 321

Query: 540 TFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ 599
           TFVG+L+ACSH G+ +    YF  M +  GI P  +HY CM+DLL R+G + +A   +  
Sbjct: 322 TFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQN 381

Query: 600 MVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDA 659
           M  +P+A +W+ LL AC +HG L LGE A ++L  LEP ++  YV LSN+Y++  +W D 
Sbjct: 382 MPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWSDV 441

Query: 660 ARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYV 719
             +R+ M   G++K PG S VE  ++V+ F   DR HP   D+Y+ +++I  L+K  GYV
Sbjct: 442 QVIRRSMLKDGVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITELLKLEGYV 501

Query: 720 PDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYI 779
           P     L ++EEE KE  L+YHSEK+A+AF LL  P G PIR+ KNLRVC DCH A+K I
Sbjct: 502 PHTANVLADIEEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVCADCHMAIKLI 561

Query: 780 SAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           + +Y R I++RD +RFHHF+ G+CSC DYW
Sbjct: 562 AKIYDREIVIRDRSRFHHFRGGSCSCKDYW 591



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 194/375 (51%), Gaps = 17/375 (4%)

Query: 153 EQFHGYAIKTCFDLN-----AFVVTGLVDMYAKCKCIFEAEYLFKMFP--DGKNHVAWTT 205
           +Q H ++I+    LN       ++  +V + A         Y + +F      N   W T
Sbjct: 35  KQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMS------YAYNVFTVIHNPNVFTWNT 88

Query: 206 MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA-AVSARDFGAQVHGCILSS 264
           +I GY+++     A   +R M V  VE +  T+P +L A + +++ R+ G  +H   + +
Sbjct: 89  IIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVRE-GEAIHSVTIRN 147

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLF 324
           GFE+ V+VQ++L+ +YA CGD +SA ++ E  +  + V+WNSMI GFA  G   EAL+LF
Sbjct: 148 GFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLF 207

Query: 325 KKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
           ++M    ++ D FT  S+L+  A    L   + VH  ++K G      V N+L+D+YAK 
Sbjct: 208 REMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKC 267

Query: 385 GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
           G +  A  VF+ M +++ +SWTSLI G A +G  EEAL+ F +M   G+ P  +    +L
Sbjct: 268 GAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVL 327

Query: 445 SACAELTVLEFG-QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-D 502
            AC+   +L+ G +    +  + G    +     +V + ++ G +  A     +M  + +
Sbjct: 328 YACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPN 387

Query: 503 VITWTALIMGCAQNG 517
            + W  L+  C  +G
Sbjct: 388 AVIWRTLLGACTIHG 402



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 175/350 (50%), Gaps = 25/350 (7%)

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
           S  +  A  +F      N FTW+++I GY+       AF  + QM +    P  +T   +
Sbjct: 65  SAPMSYAYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFL 124

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKN 199
           L+  S    ++ GE  H   I+  F+   FV   L+ +YA C     A  +F++  + ++
Sbjct: 125 LKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKE-RD 183

Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG 259
            VAW +MI G++ NG   +A+  FR+M VEGVE + FT  S+L+A A + A + G +VH 
Sbjct: 184 LVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHV 243

Query: 260 CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKE 319
            +L  G   N +V ++L+D+YAKCG +  A+R+       N VSW S+IVG A  GF +E
Sbjct: 244 YLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEE 303

Query: 320 ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA--- 376
           AL LFK+M  + +   + T+  VL   +           H  ++  GFE ++ +      
Sbjct: 304 ALELFKEMEGQGLVPSEITFVGVLYACS-----------HCGMLDEGFEYFRRMKEECGI 352

Query: 377 ---------LIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHG 416
                    ++D+ ++ G +  A+  + N+    + + W +L+  C  HG
Sbjct: 353 IPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHG 402



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 133/260 (51%), Gaps = 8/260 (3%)

Query: 56  GQLFEKMSDRDGF-----TWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSN 110
           G+    ++ R+GF       N+++  YA  G    A K+F     ++   W+S+I G++ 
Sbjct: 137 GEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFAL 196

Query: 111 YGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV 170
            G   EA  LF +M +EG  P  +T+ ++L   +  G L+ G + H Y +K     N+ V
Sbjct: 197 NGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHV 256

Query: 171 VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG 230
              L+D+YAKC  I EA+ +F    + +N V+WT++I G + NG+G +A+E F++M  +G
Sbjct: 257 TNSLLDLYAKCGAIREAQRVFSEMSE-RNAVSWTSLIVGLAVNGFGEEALELFKEMEGQG 315

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSA 289
           +  ++ TF  +L AC+     D G +    +    G    +     ++D+ ++ G +  A
Sbjct: 316 LVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQA 375

Query: 290 RRLLEYSEID-NEVSWNSMI 308
              ++   +  N V W +++
Sbjct: 376 YEYIQNMPVQPNAVIWRTLL 395



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 142/293 (48%), Gaps = 15/293 (5%)

Query: 356 KSVHSLIVKTGFEGYKFVNNA------LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
           K +H+  ++ G      +NN       +  + +    +  A+ VF ++ + +V +W ++I
Sbjct: 35  KQIHAFSIRHGVS----LNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHNPNVFTWNTII 90

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
            G A   +   A  ++  M +S + PD      +L A ++   +  G+ +H+V +++G  
Sbjct: 91  RGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFE 150

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
           S + V NSL+ +YA CG    A +VF+ M  RD++ W ++I G A NG+  EAL  + +M
Sbjct: 151 SLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREM 210

Query: 530 LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGK 589
              G +PD  T V LL A +  G  E  R     + KV G+         ++DL  + G 
Sbjct: 211 SVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKV-GLSKNSHVTNSLLDLYAKCGA 269

Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           + EA+ +  +M  E +A  W +L+    V+G    GE A     E+E    +P
Sbjct: 270 IREAQRVFSEM-SERNAVSWTSLIVGLAVNG---FGEEALELFKEMEGQGLVP 318



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 89/183 (48%), Gaps = 2/183 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
            ++    N+++  YA  G +REA+++F+E   +N  +W+SLI G +  G   EA ELF +
Sbjct: 251 SKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKE 310

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG-LVDMYAKCK 182
           M+ +G  PS+ T   VL  CS  G+L  G ++     + C  +      G +VD+ ++  
Sbjct: 311 MEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAG 370

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGY-GFKAIECFRDMRVEGVESNQFTFPSI 241
            + +A    +  P   N V W T++   + +G+ G   I     + +E   S  +   S 
Sbjct: 371 LVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSN 430

Query: 242 LTA 244
           L A
Sbjct: 431 LYA 433


>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
          Length = 514

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 231/514 (44%), Positives = 328/514 (63%), Gaps = 31/514 (6%)

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
           M  + +K + FT  +V+   AS   L   K  H+ I+K GFE    V  AL+ MYA+ G+
Sbjct: 1   MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60

Query: 387 LDCAFMVFNLMQDK-------------------------------DVISWTSLITGCAYH 415
           L+ A  VF+ M ++                               DV+SWT++I G A +
Sbjct: 61  LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G  +E+L  F+ MR +G+  D  ++ S+LSACA+L  LE G+Q HA  ++SG    + V 
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           ++LV +YAK G + DA +VFD M  R+ ++W ++I GCAQ+G+G +A+  ++QML  G K
Sbjct: 181 SALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIK 240

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           P+ I+FVG+L ACSH GL    R YF  M + YGI P   HY CMIDLLGR+G L EA+ 
Sbjct: 241 PNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAEN 300

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
            ++ M  EPD +VW ALL ACR+HG+ EL +R A +L  +E   A  YV LSN+Y+ AG+
Sbjct: 301 FINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQ 360

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
           W+DAA+VRKLMK RG+ K+PG SW+E  + +H F++ +  HP   +I+  ++ +   +K 
Sbjct: 361 WDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKA 420

Query: 716 AGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
           AGYVP+ NF L +VE++ KE+ L++HSEKLA+AFG++    G  IR+ KNLRVCGDCHT 
Sbjct: 421 AGYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGDCHTV 480

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +K+IS  + R I++RD+NRFHHFK G CSCGDYW
Sbjct: 481 IKFISLNFTRKIVVRDANRFHHFKDGRCSCGDYW 514



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 196/364 (53%), Gaps = 48/364 (13%)

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
           +G +P+Q+TL  V++ C+    L++G+Q H Y IK  F+ +  V T LV MYA+C  + +
Sbjct: 4   KGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLED 63

Query: 187 AEYLF----------------------------KMFPD--GKNHVAWTTMITGYSQNGYG 216
           A ++F                            K+F +   ++ V+WT +I GY+QNGYG
Sbjct: 64  AGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYG 123

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
            +++  F  MR  G++S++F   S+L+ACA ++A + G Q H  ++ SGF  ++ V SAL
Sbjct: 124 DESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSAL 183

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           +DMYAK G ++ A ++ +     NEVSWNS+I G A+ G   +A+ LF++M    IK ++
Sbjct: 184 VDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNE 243

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA-----LIDMYAKQGNLDCAF 391
            ++  VL+  +    +N  +   +L+ +     Y  V +      +ID+  + G LD A 
Sbjct: 244 ISFVGVLSACSHTGLVNEGRGYFNLMTQN----YGIVPDVSHYTCMIDLLGRAGCLDEAE 299

Query: 392 MVFNLMQ-DKDVISWTSLITGCAYHGSYEEALKYFS-----DMRISGICPDHVVVSSILS 445
              N M  + DV  W +L+  C  HG+ E A +        +++I+GI   +V++S+I +
Sbjct: 300 NFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGI---YVLLSNIYA 356

Query: 446 ACAE 449
           A  +
Sbjct: 357 AAGQ 360



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 176/337 (52%), Gaps = 35/337 (10%)

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
           +GV+ NQFT  +++ ACA++++ + G Q H  I+  GFE++V VQ+AL+ MYA+CG L+ 
Sbjct: 4   KGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLED 63

Query: 289 ARRLL--------------------------------EYSEIDNEVSWNSMIVGFARQGF 316
           A  +                                 E SE D  VSW ++I G+A+ G+
Sbjct: 64  AGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERD-VVSWTAVIAGYAQNGY 122

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
             E+L++F +M    +K D F   SVL+  A    L   +  H+ +V++GF     V +A
Sbjct: 123 GDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSA 182

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           L+DMYAK G+++ A  VF+ M  ++ +SW S+ITGCA HG   +A+  F  M  +GI P+
Sbjct: 183 LVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPN 242

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGG-CSSLSVDNSLVLVYAKCGCINDANRVF 495
            +    +LSAC+   ++  G+    +  ++ G    +S    ++ +  + GC+++A    
Sbjct: 243 EISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFI 302

Query: 496 DSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQMLA 531
           + M    DV  W AL+  C  +G  + A +  + +L 
Sbjct: 303 NGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLG 339



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 175/333 (52%), Gaps = 7/333 (2%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++  G +++AG +F+KMS+R   TWN MI  +A +  +++A KLF E   ++  +W+++I
Sbjct: 55  YARCGSLEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVI 114

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            GY+  G   E+  +F QM+  G +  ++ + +VL  C+    L+ G QFH Y +++ F 
Sbjct: 115 AGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFA 174

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
           L+  V + LVDMYAK   + +A  +F   P  +N V+W ++ITG +Q+G G  A+  F  
Sbjct: 175 LDIVVGSALVDMYAKSGSMEDACQVFDKMPQ-RNEVSWNSIITGCAQHGRGNDAVLLFEQ 233

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCG 284
           M   G++ N+ +F  +L+AC+     + G      +  + G   +V   + +ID+  + G
Sbjct: 234 MLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAG 293

Query: 285 DLDSARRLLEYSEIDNEVS-WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
            LD A   +    ++ +VS W +++      G  + A  + + +   +++I    Y  + 
Sbjct: 294 CLDEAENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGI-YVLLS 352

Query: 344 NCFASNIDLNNAKSVHSLIVKTGF---EGYKFV 373
           N +A+    ++A  V  L+   G     GY ++
Sbjct: 353 NIYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWI 385


>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
 gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
          Length = 652

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 246/646 (38%), Positives = 377/646 (58%), Gaps = 5/646 (0%)

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
           N F+   L+D+Y KC    +A  +F      KN  +WT M+  +++N    +    FR M
Sbjct: 9   NRFLCNLLIDLYTKCDRFDDALAVFHGI-QSKNVFSWTMMLAAFAENRDFDRCWLFFRGM 67

Query: 227 RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD- 285
            ++G+   +      L+AC        G  +   IL +G E    VQ+AL+ +Y K G  
Sbjct: 68  LLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHC 127

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
            D+A   L  S  D  V+W++M+  +AR G  +EAL LF++M    +  +  T  S L+ 
Sbjct: 128 TDAASVFLRMSHRD-VVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDA 186

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
            AS  DL +   +H  +   G +    V  AL+++Y K G ++ A   F  + +K+V++W
Sbjct: 187 CASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAW 246

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA-VFL 464
           +++    A +    +A++    M + G+ P+     S+L ACA +  L+ G+++H  + +
Sbjct: 247 SAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHV 306

Query: 465 KSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEAL 523
             GG  S + V  +LV +Y+KCG +  A  +FD +   D++ W +LI   AQ+G+ ++AL
Sbjct: 307 LGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKAL 366

Query: 524 QFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDL 583
           + +++M   G +P  ITF  +LFACSHAG+ +  R +F S    +GI P  +H+ CM+DL
Sbjct: 367 ELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDL 426

Query: 584 LGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPY 643
           LGR+G +++++ LL  M  EP    W A L ACR + +++    AA NLF+L+P    PY
Sbjct: 427 LGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPRKRAPY 486

Query: 644 VQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIY 703
           V LSNMY+ AG+W D AR+R+ M+     KE G SW+E   +VH FIS D  HP   +I+
Sbjct: 487 VLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIH 546

Query: 704 SKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIF 763
           +++  +  L+K AGYVPD    LH+V++E KE  + YHSEKLA+AF LLT P+G+PIR+ 
Sbjct: 547 AELQRLTKLMKAAGYVPDTEMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEGSPIRVV 606

Query: 764 KNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           KNLRVC DCHTA K+IS +  R I++RD NRFH F+ G CSCGDYW
Sbjct: 607 KNLRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 652



 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 208/408 (50%), Gaps = 7/408 (1%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ- 123
           R+ F  N +I  Y    R  +A  +F+    KN F+W+ ++  ++    D +   LF++ 
Sbjct: 8   RNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAE-NRDFDRCWLFFRG 66

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC-K 182
           M L+G  P +  +   L  C+    +  G       + T  +  + V T LV +Y K   
Sbjct: 67  MLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGH 126

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
           C   A    +M    ++ VAW+ M+  Y++NG+  +A+  FR M ++GV  N+ T  S L
Sbjct: 127 CTDAASVFLRM--SHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGL 184

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
            ACA++     GA +H  + + G ++ V V +AL+++Y KCG +++A          N V
Sbjct: 185 DACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVV 244

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           +W+++   +AR   +++A+ +  +M    +  +  T+ SVL+  A+   L   + +H  I
Sbjct: 245 AWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERI 304

Query: 363 --VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
             +  G E   +V  AL++MY+K GNL  A  +F+ +   D++ W SLI   A HG  E+
Sbjct: 305 HVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEK 364

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
           AL+ F  MR+ G+ P  +  +S+L AC+   +L+ G++    F+   G
Sbjct: 365 ALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHG 412



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 190/414 (45%), Gaps = 41/414 (9%)

Query: 16  RSKIIGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMI 74
           R   IG +     +G  ++  S +  ALV  +   G   +A  +F +MS RD   W+ M+
Sbjct: 90  REITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFLRMSHRDVVAWSAMV 149

Query: 75  AAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQY 134
           AAYA +G  REA  LF                                QM L+G  P++ 
Sbjct: 150 AAYARNGHPREALGLFR-------------------------------QMDLDGVAPNKV 178

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
           TL + L  C+  G L+ G   H             V T LV++Y KC  I  A   F   
Sbjct: 179 TLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQI 238

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
            + KN VAW+ +   Y++N     AI     M +EG+  N  TF S+L ACAA++A   G
Sbjct: 239 VE-KNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQG 297

Query: 255 AQVHGCI--LSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            ++H  I  L  G E++VYV +AL++MY+KCG+L  A  + +     + V WNS+I   A
Sbjct: 298 RRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNA 357

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTGF--EG 369
           + G  ++AL LF++M    ++    T+ SVL  C  + +     K   S I   G   E 
Sbjct: 358 QHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEA 417

Query: 370 YKFVNNALIDMYAKQGNL-DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
             F    ++D+  + G + D   ++ ++  +   ++W + +  C  + + + A+
Sbjct: 418 EHF--GCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAI 469



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 170/369 (46%), Gaps = 8/369 (2%)

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLF 324
           G+  N ++ + LID+Y KC   D A  +    +  N  SW  M+  FA           F
Sbjct: 5   GWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFF 64

Query: 325 KKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
           + M  + I   +      L+      ++   +S+   I+ TG E    V  AL+ +Y K 
Sbjct: 65  RGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKL 124

Query: 385 GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
           G+   A  VF  M  +DV++W++++   A +G   EAL  F  M + G+ P+ V + S L
Sbjct: 125 GHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGL 184

Query: 445 SACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVI 504
            ACA L  L  G  +H      G  S + V  +LV +Y KCG I  A   F  +  ++V+
Sbjct: 185 DACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVV 244

Query: 505 TWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESM 564
            W+A+    A+N + ++A++   +M   G  P+  TFV +L AC+     +  R   E +
Sbjct: 245 AWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERI 304

Query: 565 DKVYGIKPGPDHY--ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGD- 621
             V G     D Y    ++++  + G L  A  + D+ +   D  +W +L++    HG  
Sbjct: 305 -HVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDK-IAHLDLVLWNSLIATNAQHGQT 362

Query: 622 ---LELGER 627
              LEL ER
Sbjct: 363 EKALELFER 371


>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 265/740 (35%), Positives = 412/740 (55%), Gaps = 83/740 (11%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS-NYGLDIEAFELFWQMQLEGYRP 131
           MI  +  + R+ EA+ +F++  F + + ++ +I GY+ NY  D  A +LF++M ++    
Sbjct: 1   MITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFD-HALQLFYEMPVK---- 55

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
                 +V+   S+              IK CFD               C  +  A  LF
Sbjct: 56  ------DVVSWNSM--------------IKGCFD---------------CADLTMARKLF 80

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
              P+ ++ V+WTTMI G+ Q G            ++E  E   +  P           R
Sbjct: 81  DEMPE-RSVVSWTTMINGFLQFG------------KIEVAEGLFYKMP----------FR 117

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
           D  A                  +++I  Y   G ++   RL +     N +SW SMI G 
Sbjct: 118 DIAAW-----------------NSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGL 160

Query: 312 ARQGFHKEALSLFKKMHA--RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
            + G  +EAL LF++M     ++K    TY  V+   A+   L     +H+ + K G+  
Sbjct: 161 DQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSF 220

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
             +++ ALI  YA    ++ +  VF+     +V+ WT+L+TG   +  +E+ALK F +M 
Sbjct: 221 DAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMM 280

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
             G+ P+    +S L++C  L  L++G+++H   +K G  + + V NSL+++Y +CG +N
Sbjct: 281 REGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLN 340

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
           D   +F  +  +++++W ++I+GCAQ+G G  AL F++QM+    +PD ITF GLL ACS
Sbjct: 341 DGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACS 400

Query: 550 HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
           H+G+++  R  F+   +    +   DHYACM+D+LGRSGKL EA+ L+  M  + ++ VW
Sbjct: 401 HSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVW 460

Query: 610 KALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
             LLSAC +H  LE+ ERAA  + +LEP  +  YV LSN+Y++A +W D +R+R+ MK R
Sbjct: 461 LVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQR 520

Query: 670 GIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNV 729
           GI K+PG SW+      + F+S DR HP    IY K++ +   +KE GYVPD  FALH+V
Sbjct: 521 GITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDV 580

Query: 730 EEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIIL 789
           E+E KE+ L+YHSE+LA+ FGL++  +G+ I + KNLRVCGDCH+A+K I+ +  R II+
Sbjct: 581 EDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIV 640

Query: 790 RDSNRFHHFKAGNCSCGDYW 809
           RDS RFHHF  G CSCGDYW
Sbjct: 641 RDSTRFHHFMDGRCSCGDYW 660



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 240/484 (49%), Gaps = 21/484 (4%)

Query: 43  LVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWS 102
           + D   +  IDEA  +F+K+S  D + +  MI  YA + R   A +LF E P K+  +W+
Sbjct: 2   ITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWN 61

Query: 103 SLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG--EQFHGYAI 160
           S+I G  +      A +LF +M  E    S  T+ N        G LQ G  E   G   
Sbjct: 62  SMIKGCFDCADLTMARKLFDEMP-ERSVVSWTTMIN--------GFLQFGKIEVAEGLFY 112

Query: 161 KTCF-DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           K  F D+ A+    ++  Y     + +   LF+  P  +N ++WT+MI G  Q+G   +A
Sbjct: 113 KMPFRDIAAW--NSMIYGYCCNGRVEDGLRLFQEMP-CRNVISWTSMIGGLDQHGRSEEA 169

Query: 220 IECFRDMRVEGVE--SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           +  FR M   GVE      T+  ++TACA  SA   G Q+H  +   G+  + Y+ +ALI
Sbjct: 170 LGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALI 229

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
             YA C  ++ + R+       N V W +++ G+     H++AL +F +M    +  +  
Sbjct: 230 TFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQS 289

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           ++ S LN       L+  + +H+  VK G E   FV N+LI MY + GNL+   ++F  +
Sbjct: 290 SFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRI 349

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
             K+++SW S+I GCA HG    AL +F+ M  S + PD +  + +LSAC+   + + G+
Sbjct: 350 SKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKGR 409

Query: 458 QVHAVFLKSGGCSSLSVDN--SLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCA 514
            +   F ++   + + +D+   +V +  + G + +A  +  +M  + + + W  L+  C 
Sbjct: 410 CLFKYFSENKS-AEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACT 468

Query: 515 QNGK 518
            + K
Sbjct: 469 MHSK 472



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 194/383 (50%), Gaps = 11/383 (2%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           F   G+I+ A  LF KM  RD   WN+MI  Y  +GR+ +  +LF E P +N  +W+S+I
Sbjct: 98  FLQFGKIEVAEGLFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMI 157

Query: 106 YGYSNYGLDIEAFELFWQMQLEG--YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC 163
            G   +G   EA  LF QM   G   +P+  T   V+  C+    L +G Q H +  K  
Sbjct: 158 GGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLG 217

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNH---VAWTTMITGYSQNGYGFKAI 220
           +  +A++   L+  YA CK + ++  +F     GK H   V WT ++TGY  N     A+
Sbjct: 218 YSFDAYISAALITFYANCKQMEDSLRVFH----GKLHMNVVIWTALVTGYGLNCKHEDAL 273

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
           + F +M  EGV  NQ +F S L +C  + A D+G ++H   +  G E +V+V ++LI MY
Sbjct: 274 KVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMY 333

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
            +CG+L+    + +     N VSWNS+IVG A+ G    AL+ F +M    ++ D+ T+ 
Sbjct: 334 YRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFT 393

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA-LIDMYAKQGNLDCA-FMVFNLMQ 398
            +L+  + +      + +     +      K  + A ++D+  + G L+ A  ++ N+  
Sbjct: 394 GLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPV 453

Query: 399 DKDVISWTSLITGCAYHGSYEEA 421
             + + W  L++ C  H   E A
Sbjct: 454 KANSMVWLVLLSACTMHSKLEVA 476


>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 866

 Score =  474 bits (1219), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 255/738 (34%), Positives = 415/738 (56%), Gaps = 5/738 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM-QLEGY 129
           N  +A +   G L +A  +F +   +N F+W+ L+ GY+  G   EA  L+ +M  + G 
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGV 192

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           +P  YT   VLR C     L RG + H + ++  ++L+  VV  L+ MY KC  +  A  
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           LF   P  ++ ++W  MI+GY +NG G + ++ F  MR   V+ +  T  S+++AC  + 
Sbjct: 253 LFDRMPR-RDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLG 311

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
            R  G  +H  ++++GF  ++ V ++L  MY   G    A +L    +  + VSW +MI 
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMIS 371

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           G+      ++A+  ++ M    +K D+ T  +VL+  A+  DL+    +H L +K     
Sbjct: 372 GYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
           Y  V N LI+MY+K   +D A  +F+ +  K+VISWTS+I G   +    EAL +F  M+
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMK 491

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
           ++ + P+ + +++ L+ACA +  L  G+++HA  L++G      + N+L+ +Y +CG +N
Sbjct: 492 MT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMN 550

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
            A   F+S   +DV +W  L+ G ++ G+G   ++ +D+M+    +PD ITF+ LL  C 
Sbjct: 551 IAWNQFNS-QKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCG 609

Query: 550 HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
            + +      YF  M++ YG+ P   HYAC++DLLGR+G+L EA   + +M   PD  VW
Sbjct: 610 KSQMVRQGLMYFSKMEE-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVW 668

Query: 610 KALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
            ALL+ACR+H +++LGE +A  +FEL+  +   Y+ L N+Y+  GKW + A+VR++MK  
Sbjct: 669 GALLNACRIHHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGKWREVAKVRRMMKEN 728

Query: 670 GIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNV 729
           G+  + GCSWVE   +VH F+S+D+ HP   +I + +D     + E G       +  + 
Sbjct: 729 GLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLDGFYEKMSEVGLTTSSESSSMDE 788

Query: 730 EEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIIL 789
            E  ++     HSE+ A+AFGL+    G PI + KNL +C  CH  +K+IS    R I +
Sbjct: 789 TEISRDEIFCGHSERKAIAFGLINSVPGMPIWVTKNLNMCESCHDTVKFISKTVRREISV 848

Query: 790 RDSNRFHHFKAGNCSCGD 807
           RDS  FHHFK G CSCGD
Sbjct: 849 RDSEHFHHFKDGECSCGD 866



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 220/476 (46%), Gaps = 35/476 (7%)

Query: 39  LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF 98
           +N  +  +   G++  A  LF++M  RD  +WN MI+ Y  +G   E  KLF        
Sbjct: 234 VNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLF-------- 285

Query: 99  FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
                    ++  GL ++              P   TL +V+  C L G  + G   H Y
Sbjct: 286 ---------FAMRGLSVD--------------PDLMTLTSVISACELLGDRRLGRDIHAY 322

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFK 218
            I T F ++  V   L  MY       EAE LF    D K+ V+WTTMI+GY  N    K
Sbjct: 323 VITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRM-DCKDIVSWTTMISGYEYNFLPEK 381

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID 278
           AI+ +R M  + V+ ++ T  ++L+ACA +   D G ++H   + +   + V V + LI+
Sbjct: 382 AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLIN 441

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
           MY+KC  +D A  +       N +SW S+I G        EAL  F++M    ++ +  T
Sbjct: 442 MYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKM-TLQPNAIT 500

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
             + L   A    L   K +H+ +++TG     F+ NAL+DMY + G ++ A+  FN  Q
Sbjct: 501 LTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFN-SQ 559

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
            KDV SW  L+TG +  G     ++ F  M  + + PD +   S+L  C +  ++  G  
Sbjct: 560 KKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLM 619

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMGC 513
             +   + G   +L     +V +  + G + +A++    M  T D   W AL+  C
Sbjct: 620 YFSKMEEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNAC 675



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 182/347 (52%), Gaps = 1/347 (0%)

Query: 207 ITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF 266
           + G   NG   +A++    M+   V  ++  F +++  C    A + G++V+   LSS  
Sbjct: 66  LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMN 125

Query: 267 EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK 326
             +V + +A + M+ + G+L  A  +       N  SWN ++ G+A+QG+  EA+ L+ +
Sbjct: 126 SLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHR 185

Query: 327 M-HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           M     +K D +T+P VL       DL   + VH  +V+ G+E    V NALI MY K G
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCG 245

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
           ++  A ++F+ M  +D+ISW ++I+G   +G   E LK F  MR   + PD + ++S++S
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVIS 305

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
           AC  L     G+ +HA  + +G    +SV NSL  +Y   G   +A ++F  M  +D+++
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVS 365

Query: 506 WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
           WT +I G   N   ++A+  Y  M     KPD IT   +L AC+  G
Sbjct: 366 WTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLG 412



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 151/350 (43%), Gaps = 34/350 (9%)

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           G    G  +EA+ L   M    + +D+  + +++              V+S+ + +    
Sbjct: 68  GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSL 127

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
              + NA + M+ + GNL  A+ VF  M ++++ SW  L+ G A  G ++EA+  +  M 
Sbjct: 128 SVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRML 187

Query: 430 -ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
            + G+ PD      +L  C  +  L  G++VH   ++ G    + V N+L+ +Y KCG +
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDV 247

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
             A  +FD M  RD+I+W A+I G  +NG G E L+ +  M      PD +T   ++ AC
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISAC 307

Query: 549 SHAG---LAENARWY-------------------------FESMDKVYGIKPGPDHYACM 580
              G   L  +   Y                         +   +K++      D  +  
Sbjct: 308 ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWT 367

Query: 581 IDLLGRSGKLIEAKA-----LLDQMVGEPDATVWKALLSACRVHGDLELG 625
             + G     +  KA     ++DQ   +PD     A+LSAC   GDL+ G
Sbjct: 368 TMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG 417



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 125/300 (41%), Gaps = 39/300 (13%)

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
           + G   +G  EEA+K  + M+   +  D  V  +++  C      E G +V++V L S  
Sbjct: 66  LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMN 125

Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
             S+ + N+ + ++ + G + DA  VF  M  R++ +W  L+ G A+ G   EA+  Y +
Sbjct: 126 SLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHR 185

Query: 529 ML-ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKV-YGIKPGPDHYACMIDLLGR 586
           ML   G KPD  TF  +L  C   G+ + AR     +  V YG +   D    +I +  +
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTC--GGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVK 243

Query: 587 SGKLIEAKALLDQMVG----------------------------------EPDATVWKAL 612
            G +  A+ L D+M                                    +PD     ++
Sbjct: 244 CGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSV 303

Query: 613 LSACRVHGDLELGERAANNLFELE-PMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
           +SAC + GD  LG      +      ++      L+ MY  AG W +A ++   M  + I
Sbjct: 304 ISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDI 363


>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Vitis vinifera]
          Length = 877

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 244/667 (36%), Positives = 391/667 (58%), Gaps = 1/667 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D  T + ++  YA   +L  + + F+  P KN+ +WS++I G           ELF +
Sbjct: 206 DCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKE 265

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           MQ  G   SQ T  +V R C+    L+ G Q HG+A+KT F  +  + T  +DMY KC  
Sbjct: 266 MQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNN 325

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A+ LF   P+  N  ++  +I GY+++  G +A+  FR ++  G+  ++ +      
Sbjct: 326 LSDAQKLFNSLPN-HNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFR 384

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           ACA +     G QVHG  + S  ++N+ V +A++DMY KCG L  A  + E     + VS
Sbjct: 385 ACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVS 444

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN++I    + G  ++ LSLF  M    ++ D+FTY SVL   A    LN    +H+ I+
Sbjct: 445 WNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRII 504

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K+      FV  ALIDMY+K G ++ A  + + + ++ V+SW ++I+G +     EEA K
Sbjct: 505 KSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQK 564

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            FS M   G+ PD+   ++IL  CA L  +E G+Q+HA  +K    S   + ++LV +Y+
Sbjct: 565 TFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYS 624

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG + D   +F+    RD +TW A++ G AQ+G G+EAL+ ++ M     KP++ TF+ 
Sbjct: 625 KCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLA 684

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           +L AC H GL E    YF SM   YG+ P  +HY+C++D++GRSG++ +A  L++ M  E
Sbjct: 685 VLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFE 744

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
            DA +W+ LLS C++HG++E+ E+AA ++ +LEP ++  YV LSN+Y+ AG W +  ++R
Sbjct: 745 ADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLR 804

Query: 664 KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMN 723
           K+M+  G++KEPGCSW+E  S+VH F+  D+ HP   +IY  +D +   +K  GY+PD +
Sbjct: 805 KMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDTD 864

Query: 724 FALHNVE 730
           F L++ E
Sbjct: 865 FILNDDE 871



 Score =  286 bits (733), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 193/638 (30%), Positives = 319/638 (50%), Gaps = 24/638 (3%)

Query: 18  KIIGPARYTHN--VGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMI 74
           K + P +  H   +    KP   +   L+  +    +++ A ++F+ M  RD  +WN M+
Sbjct: 56  KALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAML 115

Query: 75  AAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQY 134
             YA  G +  A+KLF+  P ++  +W+SLI GY + G   +  ++F QM   G    + 
Sbjct: 116 FGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRT 175

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
           T   VL+ CS       G Q HG A+K  FD +    + L+DMYAKCK +  +   F   
Sbjct: 176 TFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSM 235

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
           P+ KN V+W+ +I G  QN      +E F++M+  GV  +Q TF S+  +CA +SA   G
Sbjct: 236 PE-KNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLG 294

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
           +Q+HG  L + F  +V + +A +DMY KC +L  A++L       N  S+N++IVG+AR 
Sbjct: 295 SQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARS 354

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
               EAL +F+ +    + +D+ +       C     DL   + VH L +K+  +    V
Sbjct: 355 DKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQ-VHGLSMKSLCQSNICV 413

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
            NA++DMY K G L  A +VF  M  +D +SW ++I     +G+ E+ L  F  M  SG+
Sbjct: 414 ANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGM 473

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
            PD     S+L ACA    L  G ++H   +KS       V  +L+ +Y+KCG +  A +
Sbjct: 474 EPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEK 533

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGL 553
           + D +  + V++W A+I G +   + +EA + + +ML  G  PD  T+  +L  C++   
Sbjct: 534 LHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVT 593

Query: 554 AENARWYFESMDKVYGIKPGPDHY--ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKA 611
            E  +     + K    +   D Y  + ++D+  + G + + + + ++     D   W A
Sbjct: 594 VELGKQIHAQIIKK---ELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNR-DFVTWNA 649

Query: 612 LLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNM 649
           ++     HG   LGE A   +FE        Y+QL N+
Sbjct: 650 MVCGYAQHG---LGEEAL-KIFE--------YMQLENV 675



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 154/539 (28%), Positives = 253/539 (46%), Gaps = 48/539 (8%)

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK------CIFE-- 186
           T  ++ + CS +  L  G+Q H   I T F    FV   L+ MY KC        +F+  
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103

Query: 187 -----------------------AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
                                  A+ LF   P+ ++ V+W ++I+GY  NG   K I+ F
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPE-RDVVSWNSLISGYLHNGDHRKVIDVF 162

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
             M   G   ++ TF  +L +C+++     G Q+HG  +  GF+ +V   SAL+DMYAKC
Sbjct: 163 LQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKC 222

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
             LD + +        N VSW+++I G  +    +  L LFK+M    + +   T+ SV 
Sbjct: 223 KKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVF 282

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVI 403
              A    L     +H   +KT F     +  A +DMY K  NL  A  +FN + + ++ 
Sbjct: 283 RSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQ 342

Query: 404 SWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVF 463
           S+ ++I G A      EAL  F  ++ SG+  D V +S    ACA +     G QVH + 
Sbjct: 343 SYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLS 402

Query: 464 LKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEAL 523
           +KS   S++ V N+++ +Y KCG + +A  VF+ M +RD ++W A+I    QNG  ++ L
Sbjct: 403 MKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTL 462

Query: 524 QFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWY-----FESMDKVYGIKPGPDHYA 578
             +  ML  G +PD  T+  +L AC        A W       E  +++   + G D + 
Sbjct: 463 SLFVWMLQSGMEPDEFTYGSVLKAC--------AGWQALNCGMEIHNRIIKSRLGLDSFV 514

Query: 579 --CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
              +ID+  + G + +A+ L D++  E     W A++S   +    E  ++  + + E+
Sbjct: 515 GIALIDMYSKCGMMEKAEKLHDRL-AEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEM 572



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 213/444 (47%), Gaps = 35/444 (7%)

Query: 212 QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVY 271
           Q+   FK +        +   + + TF  I   C+   A   G Q H  ++ + F+  V+
Sbjct: 19  QSKSPFKTLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVF 78

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD 331
           V + LI MY KC DL+ A ++ +     + VSWN+M+ G+A +G    A  LF  M  RD
Sbjct: 79  VTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERD 138

Query: 332 I------------------KIDDF-------------TYPSVLNCFASNIDLNNAKSVHS 360
           +                   ID F             T+  VL   +S  D      +H 
Sbjct: 139 VVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHG 198

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
           L VK GF+      +AL+DMYAK   LDC+   F+ M +K+ +SW+++I GC  +     
Sbjct: 199 LAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRG 258

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
            L+ F +M+ +G+       +S+  +CA L+ L  G Q+H   LK+   + + +  + + 
Sbjct: 259 GLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLD 318

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           +Y KC  ++DA ++F+S+   ++ ++ A+I+G A++ KG EAL  +  +   G   D ++
Sbjct: 319 MYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVS 378

Query: 541 FVGLLFACSH-AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ 599
             G   AC+   G  E  + +  SM  +   +        ++D+ G+ G L+EA  + ++
Sbjct: 379 LSGAFRACAVIKGDLEGLQVHGLSMKSL--CQSNICVANAILDMYGKCGALVEACLVFEE 436

Query: 600 MVGEPDATVWKALLSACRVHGDLE 623
           MV   DA  W A+++A   +G+ E
Sbjct: 437 MVSR-DAVSWNAIIAAHEQNGNEE 459


>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 247/642 (38%), Positives = 378/642 (58%), Gaps = 30/642 (4%)

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           ++  +W   +   +++    +AI  + +M V G   + F FP++L A + +     G Q+
Sbjct: 55  RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114

Query: 258 HGCILSSGF-EANVYVQSALIDMYAKCGDL--------------------DSARRLLEYS 296
           H   +  G+  ++V V + L++MY KCG +                    D ++ L E  
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESF 174

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              + VSWN+MI  F++     EAL+ F+ M    +++D  T  SVL   +    L+  K
Sbjct: 175 VDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGK 234

Query: 357 SVHSLIVKTG-FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
            +H+ +++        FV +AL+DMY     ++    VF+ +  + +  W ++I+G A +
Sbjct: 235 EIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARN 294

Query: 416 GSYEEALKYFSDM-RISGICPDHVVVSSILSACAE-LTVLEFGQQVHAVFLKSGGCSSLS 473
           G  E+AL  F +M +++G+ P+   ++S++ AC   L  +  G+++HA  +++   S ++
Sbjct: 295 GLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDIT 354

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA-- 531
           V ++LV +YAKCGC+N + RVF+ M  ++VITW  LIM C  +GKG+EAL+ +  M+A  
Sbjct: 355 VGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEA 414

Query: 532 -RG--TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSG 588
            RG   KP+ +TF+ +  ACSH+GL       F  M   +G++P  DHYAC++DLLGR+G
Sbjct: 415 GRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAG 474

Query: 589 KLIEAKALLDQMVGEPDAT-VWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLS 647
           +L EA  L++ M  E D    W +LL ACR+H ++ELGE AA NL  LEP  A  YV LS
Sbjct: 475 QLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLS 534

Query: 648 NMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKID 707
           N+YS+AG W  A  VRK M+  G++KEPGCSW+E   +VH F++ D  HP    ++  ++
Sbjct: 535 NIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLE 594

Query: 708 EIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLR 767
            +   +++ GYVPD +  LHNV+E+ KE  L  HSEKLA+AFG+L  P G  IR+ KNLR
Sbjct: 595 TLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLR 654

Query: 768 VCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           VC DCH A K+IS +  R II+RD  RFHHFK G CSCGDYW
Sbjct: 655 VCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 696



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 220/457 (48%), Gaps = 41/457 (8%)

Query: 93  TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
           +P ++  +W   +   +      EA   + +M + G RP  +    VL+  S    L+ G
Sbjct: 52  SPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTG 111

Query: 153 EQFHGYAIKTCFDLNAFVVTG-LVDMYAKCKCIFEAEY--------------------LF 191
           EQ H  A+K  +  ++  V   LV+MY KC  I +  +                    LF
Sbjct: 112 EQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALF 171

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
           + F D ++ V+W TMI+ +SQ+    +A+  FR M +EGVE +  T  S+L AC+ +   
Sbjct: 172 ESFVD-RDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERL 230

Query: 252 DFGAQVHGCIL-SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
           D G ++H  +L ++    N +V SAL+DMY  C  ++S RR+ ++        WN+MI G
Sbjct: 231 DVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISG 290

Query: 311 FARQGFHKEALSLFKKMHARDIKI-----DDFTYPSVLN-CFASNIDLNNAKSVHSLIVK 364
           +AR G  ++AL LF +M    IK+     +  T  SV+  C  S   +   K +H+  ++
Sbjct: 291 YARNGLDEKALILFIEM----IKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIR 346

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
                   V +AL+DMYAK G L+ +  VFN M +K+VI+W  LI  C  HG  EEAL+ 
Sbjct: 347 NMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALEL 406

Query: 425 FSDM-----RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
           F +M     R     P+ V   ++ +AC+   ++  G  +        G    S   + V
Sbjct: 407 FKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACV 466

Query: 480 L-VYAKCGCINDANRVFDSMHTR--DVITWTALIMGC 513
           + +  + G + +A  + ++M      V  W++L+  C
Sbjct: 467 VDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGAC 503



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 183/364 (50%), Gaps = 14/364 (3%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           FT N ++A YA  GR+ ++K LF     ++  +W+++I  +S      EA   F  M LE
Sbjct: 149 FTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLE 208

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDL--NAFVVTGLVDMYAKCKCIF 185
           G      T+ +VL  CS    L  G++ H Y ++   DL  N+FV + LVDMY  C+ + 
Sbjct: 209 GVELDGVTIASVLPACSHLERLDVGKEIHAYVLRN-NDLIENSFVGSALVDMYCNCRQVE 267

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILTA 244
               +F     G+    W  MI+GY++NG   KA+  F +M +V G+  N  T  S++ A
Sbjct: 268 SGRRVFDHIL-GRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPA 326

Query: 245 CA-AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           C  +++A   G ++H   + +   +++ V SAL+DMYAKCG L+ +RR+       N ++
Sbjct: 327 CVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVIT 386

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHAR-----DIKIDDFTYPSVL-NCFASNIDLNNAKS 357
           WN +I+     G  +EAL LFK M A      + K ++ T+ +V   C  S +       
Sbjct: 387 WNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNL 446

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK--DVISWTSLITGCAYH 415
            + +    G E        ++D+  + G L+ A+ + N M  +   V +W+SL+  C  H
Sbjct: 447 FYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIH 506

Query: 416 GSYE 419
            + E
Sbjct: 507 QNVE 510



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 127/254 (50%), Gaps = 13/254 (5%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM- 124
           + F  + ++  Y N  ++   +++F+    +    W+++I GY+  GLD +A  LF +M 
Sbjct: 249 NSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMI 308

Query: 125 QLEGYRPSQYTLDNVLRLC--SLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           ++ G  P+  T+ +V+  C  SL   + +G++ H YAI+     +  V + LVDMYAKC 
Sbjct: 309 KVAGLLPNTTTMASVMPACVHSLAA-IAKGKEIHAYAIRNMLASDITVGSALVDMYAKCG 367

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-----VESNQFT 237
           C+  +  +F   P+ KN + W  +I     +G G +A+E F++M  E       + N+ T
Sbjct: 368 CLNLSRRVFNEMPN-KNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVT 426

Query: 238 FPSILTACAAVSARDFGAQV-HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY- 295
           F ++  AC+       G  + +      G E      + ++D+  + G L+ A  L+   
Sbjct: 427 FITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTM 486

Query: 296 -SEIDNEVSWNSMI 308
            +E D   +W+S++
Sbjct: 487 PAEFDKVGAWSSLL 500



 Score = 46.2 bits (108), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 27/217 (12%)

Query: 36  ASDLN--RALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE 92
           ASD+    ALVD ++  G ++ + ++F +M +++  TWN +I A    G+  EA +LF  
Sbjct: 350 ASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKN 409

Query: 93  TPFK---------NFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRL 142
              +         N  T+ ++    S+ GL  E   LF++M+ + G  P+      V+ L
Sbjct: 410 MVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDL 469

Query: 143 CSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC-------IFEAEYLFKMFP 195
               G L+       Y +          V     +   C+           A+ L  + P
Sbjct: 470 LGRAGQLEE-----AYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEP 524

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
           +  +H    + I  YS  G   KA+E  ++MR  GV+
Sbjct: 525 NVASHYVLLSNI--YSSAGLWNKAMEVRKNMRQMGVK 559


>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
 gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 246/615 (40%), Positives = 363/615 (59%), Gaps = 26/615 (4%)

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID 278
           A+  +  MR   +E + F  PS+L AC+ +S    G ++HG  + +G  ++V+V +AL+ 
Sbjct: 93  ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152

Query: 279 MYAKCGDLDSARRLLE-YSEID---------------------NEVSWNSMIVGFARQGF 316
           MY++CG L SAR L +  SE D                     + VSW +MI G+ R   
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212

Query: 317 HKEALSLFKKMHARDIKIDDFTYPS-VLNC-FASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
            +E   LF +M   ++  +D T  S +++C F   + L   K +H+ I++ GF     + 
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQL--GKRLHAYILRNGFGMSLALA 270

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
            AL+DMY K G +  A  +F+ M++KDV++WT++I+  A     + A + F  MR +G+ 
Sbjct: 271 TALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVR 330

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           P+ + + S+LS CA    L+ G+  HA   K G    + +  +L+ +YAKCG I+ A R+
Sbjct: 331 PNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRL 390

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
           F     RD+ TW  ++ G   +G G++AL+ + +M   G KP+ ITF+G L ACSHAGL 
Sbjct: 391 FSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLV 450

Query: 555 ENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
              +  FE M   +G+ P  +HY CM+DLLGR+G L EA  +++ M   P+  +W A+L+
Sbjct: 451 VEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLA 510

Query: 615 ACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
           AC++H +  +GE AA  L  LEP N    V +SN+Y+ A +W D A +RK +K  GI+KE
Sbjct: 511 ACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKE 570

Query: 675 PGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGK 734
           PG S +E N  VH F   D  HPL   I   + E+   +KEAGY+PD +  LHN++EE K
Sbjct: 571 PGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNIDEEEK 630

Query: 735 EIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNR 794
           E  L YHSEKLA+AFGL++   G PIR+ KNLR+C DCHT  K +S +Y R II+RD NR
Sbjct: 631 ETALNYHSEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLLSKIYKRVIIVRDRNR 690

Query: 795 FHHFKAGNCSCGDYW 809
           FHHF+ G+CSCG YW
Sbjct: 691 FHHFREGSCSCGGYW 705



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 136/432 (31%), Positives = 217/432 (50%), Gaps = 33/432 (7%)

Query: 1   MFKLDFKILNFSLRCRSKI---IGPARYTHNV-GNSVKPA--SDL---NRALVDFSNSGE 51
           M KLD ++ +F +    K    I  AR    + G SVK    SD+   N  +  +S  G 
Sbjct: 100 MRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGS 159

Query: 52  IDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNY 111
           +  A  LF+KMS+RD  +W+TMI AY           LF     ++  +W+++I GY   
Sbjct: 160 LVSARLLFDKMSERDVVSWSTMIRAYIT---------LFYGFSQRSIVSWTAMIAGYIRC 210

Query: 112 GLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV 171
               E   LF +M  E   P+  T+ +++  C   G +Q G++ H Y ++  F ++  + 
Sbjct: 211 NDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALA 270

Query: 172 TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV 231
           T LVDMY KC  I  A  +F    + K+ + WT MI+ Y+Q      A + F  MR  GV
Sbjct: 271 TALVDMYGKCGEIRSARAIFDSMKN-KDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGV 329

Query: 232 ESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR 291
             N+ T  S+L+ CA   A D G   H  I   G E +V +++ALIDMYAKCGD+  A+R
Sbjct: 330 RPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQR 389

Query: 292 LLEYSE-IDNEV-SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFAS 348
           L  +SE ID ++ +WN M+ G+   G+ ++AL LF +M    +K +D T+   L+ C  +
Sbjct: 390 L--FSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHA 447

Query: 349 NIDLNNA----KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVI 403
            + +       K +H   +    E Y      ++D+  + G LD A+ M+ ++    ++ 
Sbjct: 448 GLVVEGKGLFEKMIHDFGLVPKVEHY----GCMVDLLGRAGLLDEAYKMIESMPVTPNIA 503

Query: 404 SWTSLITGCAYH 415
            W +++  C  H
Sbjct: 504 IWGAMLAACKIH 515


>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
 gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 252/688 (36%), Positives = 382/688 (55%), Gaps = 6/688 (0%)

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+  G   S  +   +   C     L  G  FH    +T  +   F+   ++ MY KC  
Sbjct: 1   MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A  +F    + +N V+W T+I+ Y++NG   K    F +M     + N  T+   L 
Sbjct: 61  LADARKVFDEMRE-RNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLR 119

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           +    S  + G Q+H   + SG  +N  V +A+ +MY KCG L+ A  + E     N V+
Sbjct: 120 SLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVA 179

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           W  ++VG+ +     +AL+LF KM    +++D++ +  VL   A   +LN  + +H  IV
Sbjct: 180 WTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIV 239

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K G E    V   L+D Y K  NL+ A   F  + + + +SW++LITG    G +EEALK
Sbjct: 240 KLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALK 299

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            F  +R   +  +    +SI  AC+ L     G Q HA  +KS   +    +++++ +Y+
Sbjct: 300 TFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYS 359

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           +CG ++ A RVF+S+   D + WTA+I G A  G   EAL+ + +M   G +P+ +TF+ 
Sbjct: 360 RCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIA 419

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           +L ACSH+GL    R Y ESM   YG+    DHY CM+D+  R+G L EA  L+  M   
Sbjct: 420 VLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFS 479

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
           PDA  WK LL  C  + +LE+GE AA NLF+L+P +   Y+ + N+Y++ GKW++AA VR
Sbjct: 480 PDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVR 539

Query: 664 KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEI--MLLIKEAGYVPD 721
           K+M  R +RKE  CSW+    +VH FI  D+ HP   +IYSK++ +   ++ +E G + +
Sbjct: 540 KMMAERNLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLEALNDSVIKEETGLLTE 599

Query: 722 MNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISA 781
            + +  N   E KE  L  HSE+LA+AFGL++ P  AP+ +FKNLR C DCH   K +S 
Sbjct: 600 EDVS--NSLPERKE-QLLVHSERLALAFGLISTPSSAPVVVFKNLRACKDCHDFGKQVSL 656

Query: 782 VYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +  R I++RDS RFHHFK G CSC DYW
Sbjct: 657 ITGREIVVRDSFRFHHFKLGECSCNDYW 684



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 150/465 (32%), Positives = 255/465 (54%), Gaps = 8/465 (1%)

Query: 56  GQLFEKMSDRD-----GFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSN 110
           G+LF +   R       F  N+++  Y   G L +A+K+F+E   +N  +W+++I  Y+ 
Sbjct: 29  GRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAE 88

Query: 111 YGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV 170
            G+  + F +F  M     +P+  T    LR       L+ G+Q H +AI++    NA V
Sbjct: 89  NGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASV 148

Query: 171 VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG 230
            T + +MY KC  +  AE +F+   + KN VAWT ++ GY+Q      A+  F  M  EG
Sbjct: 149 NTAISNMYVKCGWLEGAELVFEKMSE-KNAVAWTGIMVGYTQAERQMDALALFAKMVNEG 207

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           VE +++ F  +L ACA +   +FG Q+HG I+  G E+ V V + L+D Y KC +L+SA 
Sbjct: 208 VELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESAT 267

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
           +  E+    N+VSW+++I G+ + G  +EAL  F+ +  R + I+ FTY S+    ++  
Sbjct: 268 KAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALA 327

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           D N+    H+  +K+    Y+   +A+I MY++ G LD A  VF  + D D ++WT++I 
Sbjct: 328 DFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIA 387

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL-TVLEFGQQVHAVFLKSGGC 469
           G AY G+  EALK F  M+  G+ P+ V   ++L+AC+    V+E  Q + ++    G  
Sbjct: 388 GYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVA 447

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSM-HTRDVITWTALIMGC 513
           +++   + +V +Y++ G + +A  +  SM  + D ++W  L+ GC
Sbjct: 448 TTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGC 492



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 67/169 (39%), Gaps = 40/169 (23%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +S  G +D A ++FE + D D   W  +IA YA  G   EA KLF               
Sbjct: 358 YSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFR-------------- 403

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF-----HGYAI 160
                            +MQ  G RP+  T   VL  CS  GL+  G Q+       Y +
Sbjct: 404 -----------------RMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGV 446

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
            T  D        +VD+Y++   + EA  L +  P   + ++W  ++ G
Sbjct: 447 ATTIDH----YDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGG 491


>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
          Length = 981

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 251/693 (36%), Positives = 405/693 (58%), Gaps = 2/693 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N++I  + N GR+++A+KLF+     +  + +++I  YS+ G+  + F +F  M+  G R
Sbjct: 184 NSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLR 243

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P   TL +++ +C+       G   H   +++  D +  V+  LV+MY+    + +AE+L
Sbjct: 244 PDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFL 303

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F      ++ ++W TMI+ Y QN     A++    +       N  TF S L AC++  A
Sbjct: 304 FWNMSR-RDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGA 362

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              G  VH  +L    + N+ V ++LI MY KC  ++ A ++ +     + VS+N +I G
Sbjct: 363 LIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGG 422

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN-AKSVHSLIVKTGFEG 369
           +A      +A+ +F  + +  IK +  T  ++   F S+ DL+N  + +H+ I++TGF  
Sbjct: 423 YAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLS 482

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
            ++V N+LI MYAK GNL+ +  +FN + +K+++SW ++I   A  G  EEALK F DM+
Sbjct: 483 DEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQ 542

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
            +G   D V ++  LS+CA L  LE G Q+H + +KSG  S   V N+ + +Y KCG +N
Sbjct: 543 HAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMN 602

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
           +  ++      R    W  LI G A+ G  KEA + + QM+A G KPDY+TFV LL ACS
Sbjct: 603 EMLQMVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLSACS 662

Query: 550 HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
           HAGL +    Y+ SM   +G+ PG  H  C++DLLGR G+  EA+  +++M   P+  +W
Sbjct: 663 HAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERFIEEMPVLPNDLIW 722

Query: 610 KALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
           ++LLS+ R H +LE+G +AA  L EL+P +   YV LSN+Y+T  +W D  ++R  MK+ 
Sbjct: 723 RSLLSSSRTHKNLEIGRKAAKKLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTI 782

Query: 670 GIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNV 729
            I K P CSW++  ++V  F   DRGH     IY+K+DE++L ++E GY+ D + ALH+ 
Sbjct: 783 NINKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVGYIADTSSALHDT 842

Query: 730 EEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRI 762
           +EE KE  L  HSEKLA+A+GL+ +P+G+  ++
Sbjct: 843 DEEQKEQNLWNHSEKLALAYGLIVVPEGSTCQM 875



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 152/550 (27%), Positives = 269/550 (48%), Gaps = 16/550 (2%)

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL---LQ 150
           P +   TW + + G    G D+ AFEL   M+  G   S + L +++  C  +G    + 
Sbjct: 2   PDRTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGIA 61

Query: 151 RGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
            G   H    +     N ++ T L+ +Y     + +A  LF   P+ +N V+WT ++   
Sbjct: 62  CGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPE-RNVVSWTALMVAL 120

Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV 270
           S NGY  + +  +R MR EGV  N   F ++++ C ++     G QV   ++ SG +  V
Sbjct: 121 SSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQV 180

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
            V ++LI M+   G +  A +L +  E  + +S N+MI  ++ QG   +   +F  M   
Sbjct: 181 SVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHH 240

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
            ++ D  T  S+++  AS    ++   +HSL +++  +    V NAL++MY+  G L  A
Sbjct: 241 GLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDA 300

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
             +F  M  +D+ISW ++I+    + +  +ALK    +  +   P+H+  SS L AC+  
Sbjct: 301 EFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSP 360

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
             L  G+ VHA+ L+     +L V NSL+ +Y KC  + DA +VF SM T DV+++  LI
Sbjct: 361 GALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLI 420

Query: 511 MGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGI 570
            G A    G +A+Q +  + + G KP+YIT + +  + + +    N   Y   +   Y I
Sbjct: 421 GGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHN---YGRPL-HAYII 476

Query: 571 KPG--PDHYAC--MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGE 626
           + G   D Y    +I +  + G L  +  + + +  + +   W A+++A   +  L  GE
Sbjct: 477 RTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNK-NIVSWNAIIAA---NAQLGHGE 532

Query: 627 RAANNLFELE 636
            A     +++
Sbjct: 533 EALKLFIDMQ 542



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 158/577 (27%), Positives = 274/577 (47%), Gaps = 21/577 (3%)

Query: 56  GQLFEKMSDRDGFTWNTMIAA-----YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSN 110
           G     ++ R G   N  I       Y + G + +A++LF E P +N  +W++L+   S+
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSS 122

Query: 111 YGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV 170
            G   E    + QM+ EG   +      V+ LC        G Q   + I +       V
Sbjct: 123 NGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSV 182

Query: 171 VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG 230
              L+ M+     + +AE LF    +  + ++   MI+ YS  G   K    F DMR  G
Sbjct: 183 ANSLITMFGNLGRVQDAEKLFDRMEE-HDTISRNAMISMYSHQGICSKCFLVFSDMRHHG 241

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           +  +  T  S+++ CA+      G+ +H   L S  +++V V +AL++MY+  G L  A 
Sbjct: 242 LRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAE 301

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM-HARDIKIDDFTYPSVLNCFASN 349
            L       + +SWN+MI  + +     +AL    ++ H  +I  +  T+ S L   +S 
Sbjct: 302 FLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIP-NHLTFSSALGACSSP 360

Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
             L + K VH+++++   +    V N+LI MY K  +++ A  VF  M   DV+S+  LI
Sbjct: 361 GALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLI 420

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLE-FGQQVHAVFLKSGG 468
            G A      +A++ FS +R +GI P+++ + +I  +      L  +G+ +HA  +++G 
Sbjct: 421 GGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGF 480

Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
            S   V NSL+ +YAKCG +  +  +F+S+  +++++W A+I   AQ G G+EAL+ +  
Sbjct: 481 LSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFID 540

Query: 529 MLARGTKPDYITFVGLLFAC-SHAGLAENARWYFESMDKVYGIKPGPDHYACMI----DL 583
           M   G K D +     L +C S A L E  + +        G+K G D  + ++    D+
Sbjct: 541 MQHAGNKLDRVCLAECLSSCASLASLEEGMQLHG------LGMKSGLDSDSYVVNAAMDM 594

Query: 584 LGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
            G+ GK+ E   ++      P    W  L+S    +G
Sbjct: 595 YGKCGKMNEMLQMVPDQAIRPQ-QCWNTLISGYAKYG 630



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 135/475 (28%), Positives = 226/475 (47%), Gaps = 40/475 (8%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           ALV+ +S +G++ +A  LF  MS RD  +WNTMI++Y  +    +A K            
Sbjct: 286 ALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLG--------- 336

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
                             +LF   ++    P+  T  + L  CS  G L  G+  H   +
Sbjct: 337 ------------------QLFHTNEI----PNHLTFSSALGACSSPGALIDGKMVHAIVL 374

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAI 220
           +     N  V   L+ MY KC  + +AE +F+  P   + V++  +I GY+    G KA+
Sbjct: 375 QLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPT-HDVVSYNVLIGGYAVLEDGTKAM 433

Query: 221 ECFRDMRVEGVESNQFTFPSILTA-CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           + F  +R  G++ N  T  +I  +  ++    ++G  +H  I+ +GF ++ YV ++LI M
Sbjct: 434 QVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITM 493

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           YAKCG+L+S+  +       N VSWN++I   A+ G  +EAL LF  M     K+D    
Sbjct: 494 YAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQHAGNKLDRVCL 553

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
              L+  AS   L     +H L +K+G +   +V NA +DMY K G ++    +      
Sbjct: 554 AECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMNEMLQMVPDQAI 613

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           +    W +LI+G A +G ++EA + F  M   G  PD+V   ++LSAC+   +++ G   
Sbjct: 614 RPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLSACSHAGLVDKGIDY 673

Query: 460 HAVFLKSGGCSSLSVDNSLVLV--YAKCGCINDANRVFDSMHT--RDVITWTALI 510
           +     S G S   + + + +V    + G   +A R  + M     D+I W +L+
Sbjct: 674 YNSMASSFGVSP-GIKHCVCIVDLLGRLGRFAEAERFIEEMPVLPNDLI-WRSLL 726



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 157/327 (48%), Gaps = 22/327 (6%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGF-----TWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           F++S ++   G+       R GF       N++I  YA  G L  +  +FN    KN  +
Sbjct: 458 FTSSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVS 517

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
           W+++I   +  G   EA +LF  MQ  G +  +  L   L  C+    L+ G Q HG  +
Sbjct: 518 WNAIIAANAQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGM 577

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG--KNHVAWTTMITGYSQNGYGFK 218
           K+  D +++VV   +DMY KC  + E   + +M PD   +    W T+I+GY++ GY  +
Sbjct: 578 KSGLDSDSYVVNAAMDMYGKCGKMNE---MLQMVPDQAIRPQQCWNTLISGYAKYGYFKE 634

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALI 277
           A E F+ M   G + +  TF ++L+AC+     D G   +  + SS G    +     ++
Sbjct: 635 AEETFKQMVAMGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIV 694

Query: 278 DMYAKCGDLDSARRLLEYSEI-DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           D+  + G    A R +E   +  N++ W S++   +    HK  L + +K   + +++D 
Sbjct: 695 DLLGRLGRFAEAERFIEEMPVLPNDLIWRSLL---SSSRTHKN-LEIGRKAAKKLLELDP 750

Query: 337 F---TYPSVLNCFASN---IDLNNAKS 357
           F    Y  + N +A+N   +D++  +S
Sbjct: 751 FDDSAYVLLSNLYATNARWVDVDKLRS 777



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 127/304 (41%), Gaps = 45/304 (14%)

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLE-- 454
           M D+   +W + ++GC   G    A +    MR  G+      ++S+++AC      E  
Sbjct: 1   MPDRTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGI 60

Query: 455 -FGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC 513
             G  +HA+  ++G   ++ +  +L+ +Y   G ++DA R+F  M  R+V++WTAL++  
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVAL 120

Query: 514 AQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY--GIK 571
           + NG  +E L+ Y QM   G   +   F  ++  C   G  EN     +    V   G++
Sbjct: 121 SSNGYLEETLRAYRQMRREGVPCNANAFATVVSLC---GSLENEVPGLQVASHVIVSGLQ 177

Query: 572 PGPDHYACMIDLLGRSGKLIEAKALLDQMVG----------------------------- 602
                   +I + G  G++ +A+ L D+M                               
Sbjct: 178 NQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDM 237

Query: 603 -----EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYV--QLSNMYSTAGK 655
                 PDAT   +L+S C        G    ++L     +++   V   L NMYS AGK
Sbjct: 238 RHHGLRPDATTLCSLMSVCASADHFSHGS-GIHSLCLRSSLDSSVTVINALVNMYSAAGK 296

Query: 656 WEDA 659
             DA
Sbjct: 297 LSDA 300


>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 712

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 255/691 (36%), Positives = 382/691 (55%), Gaps = 36/691 (5%)

Query: 153 EQFHGYAIKTCFDLNAFV---VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
           +Q H + IK     +      V      +   K I+ A  +F   P     + W TMI G
Sbjct: 24  KQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIY-ARQVFDAIPQPTLFI-WNTMIKG 81

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
           YS+  +    +  +  M    ++ ++FTFP +L       A  +G  +    +  GF++N
Sbjct: 82  YSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSN 141

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA 329
           ++VQ A I M++ C  +D AR++ +  +    V+WN M+ G+ R    K++  LF +M  
Sbjct: 142 LFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEK 201

Query: 330 RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDC 389
           R +  +  T   +L+  +   DL   K ++  I     E    + N LIDM+A  G +D 
Sbjct: 202 RGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDE 261

Query: 390 AFMVFNLMQDKDVISWTSLITGCAYHGSYE------------------------------ 419
           A  VF+ M+++DVISWTS++TG A  G  +                              
Sbjct: 262 AQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRF 321

Query: 420 -EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSL 478
            EAL  F +M++S + PD   + SIL+ACA L  LE G+ V     K+   +   V N+L
Sbjct: 322 IEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNAL 381

Query: 479 VLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDY 538
           + +Y KCG +  A +VF  MH +D  TWTA+I+G A NG G+EAL  +  M+     PD 
Sbjct: 382 IDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDE 441

Query: 539 ITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLD 598
           IT++G+L AC+HAG+ E  + +F SM   +GIKP   HY CM+DLLGR+G+L EA  ++ 
Sbjct: 442 ITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIV 501

Query: 599 QMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWED 658
            M  +P++ VW +LL ACRVH +++L E AA  + ELEP N   YV L N+Y+   +WE+
Sbjct: 502 NMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWEN 561

Query: 659 AARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGY 718
             +VRKLM  RGI+K PGCS +E N  V+ F++ D+ HP   +IY+K++ +M  + +AGY
Sbjct: 562 LRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQDLIKAGY 621

Query: 719 VPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKY 778
            PD +    ++ EE KE  L  HSEKLA+A+ L++   G  IRI KNLR+C DCH   K 
Sbjct: 622 SPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGITIRIVKNLRMCVDCHHMAKL 681

Query: 779 ISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +S  Y R +I+RD  RFHHF+ G+CSC ++W
Sbjct: 682 VSEAYNRELIVRDKTRFHHFRHGSCSCNNFW 712



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 149/532 (28%), Positives = 253/532 (47%), Gaps = 44/532 (8%)

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
           SG++  A+++F+  P    F W+++I GYS          ++  M     +P ++T   +
Sbjct: 54  SGKMIYARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFL 113

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKN 199
           L+  +    LQ G+    +A+K  FD N FV    + M++ C+ +  A  +F M  D   
Sbjct: 114 LKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDM-GDAWE 172

Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG 259
            V W  M++GY++     K+   F +M   GV  N  T   +L+AC+ +   + G  ++ 
Sbjct: 173 VVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYK 232

Query: 260 CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF-------- 311
            I     E N+ +++ LIDM+A CG++D A+ + +  +  + +SW S++ GF        
Sbjct: 233 YINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDL 292

Query: 312 ARQGFHK-----------------------EALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
           AR+ F +                       EAL+LF++M   ++K D+FT  S+L   A 
Sbjct: 293 ARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAH 352

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
              L   + V + I K   +   FV NALIDMY K GN+  A  VF  M  KD  +WT++
Sbjct: 353 LGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAM 412

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH-AVFLKSG 467
           I G A +G  EEAL  FS+M  + I PD +    +L AC    ++E GQ    ++ ++ G
Sbjct: 413 IVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHG 472

Query: 468 GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFY 526
              +++    +V +  + G + +A+ V  +M  + + I W +L+  C  +   + A    
Sbjct: 473 IKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAA 532

Query: 527 DQMLARGTKPD----YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
            Q+L    +P+    Y+    +  AC      EN R   + M +  GIK  P
Sbjct: 533 KQILE--LEPENGAVYVLLCNIYAACKR---WENLRQVRKLMME-RGIKKTP 578



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 175/355 (49%), Gaps = 13/355 (3%)

Query: 21  GPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           G   Y +  G  V+    L   L+D F+  GE+DEA  +F+ M +RD  +W +++  +AN
Sbjct: 227 GKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFAN 286

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
            G++  A+K F++ P +++ +W+++I GY      IEA  LF +MQ+   +P ++T+ ++
Sbjct: 287 IGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSI 346

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKN 199
           L  C+  G L+ GE    Y  K     + FV   L+DMY KC  + +A+ +FK     K+
Sbjct: 347 LTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEM-HHKD 405

Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH- 258
              WT MI G + NG+G +A+  F +M    +  ++ T+  +L AC      + G     
Sbjct: 406 KFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFI 465

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMIVGFARQGFH 317
              +  G + NV     ++D+  + G L+ A  ++    +  N + W S++ G  R   H
Sbjct: 466 SMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLL-GACR--VH 522

Query: 318 KEALSLFKKMHARDI----KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
           K       +M A+ I      +   Y  + N +A+     N + V  L+++ G +
Sbjct: 523 KNV--QLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGIK 575


>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 682

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 249/663 (37%), Positives = 382/663 (57%), Gaps = 5/663 (0%)

Query: 147 GLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTM 206
           G L +G+  H   I T    +  +   L+  YAKC  +  A  +F   P  +N V+   +
Sbjct: 25  GDLSKGKALHARLI-TAAHFDVVLHNNLISFYAKCGRVGLARTVFDAMP-FRNAVSANLL 82

Query: 207 ITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF 266
           ++GY+ +G   +  E  + +RV     N++   + ++A A V + D G Q HG  + +GF
Sbjct: 83  MSGYASSG---RHKESLQLLRVVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGF 139

Query: 267 EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK 326
               YV +A++ MY +C  ++ A ++ E     +  ++NSMI G+  +G    +L + + 
Sbjct: 140 AEQRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRN 199

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
           M     K D  +Y +VL   AS  D      VH+  +K   E   +V +AL+DMY K  +
Sbjct: 200 MTGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDH 259

Query: 387 LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSA 446
           +  A   F ++ +K+V+SWT+++T    +  YE+AL+ F DM + G+ P+    +  L++
Sbjct: 260 VHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNS 319

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITW 506
           CA L  L  G  + A  +K+G    L V N+L+ +Y+K G I DA+RVF SM  RDV++W
Sbjct: 320 CAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSW 379

Query: 507 TALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDK 566
             +I G A +G  +E ++ +  ML+    P Y+TFVG+L AC+  GL + A +Y  +M K
Sbjct: 380 NLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMK 439

Query: 567 VYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGE 626
             GI PG +HY CM+ LL R G+L EA+  +       D   W++LL++C+V+ +  LG 
Sbjct: 440 EVGITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNSCQVYKNYGLGH 499

Query: 627 RAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQV 686
           R A  + +LEP +   YV LSNMY+ A +W+   +VRK M+ R +RK PG SW+   S V
Sbjct: 500 RVAEQILQLEPSDVGTYVLLSNMYAKANRWDGVVKVRKHMRERAVRKSPGVSWIHVGSDV 559

Query: 687 HIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLA 746
           H+F SE++ HP    I  K++E++  IK  GYVP+    LH++++E KE  L YHSEKLA
Sbjct: 560 HVFTSEEKVHPQMDQIAKKLEELIDQIKAIGYVPNFAVVLHDIDDERKEEHLMYHSEKLA 619

Query: 747 VAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCG 806
           +AFGL+  P+GA I I KNLR+C DCH A+K IS V  R I++RD+ RFH  + G CSC 
Sbjct: 620 LAFGLIHTPKGATIHIMKNLRICDDCHVAIKLISVVTSRKIVVRDAVRFHCIEGGICSCN 679

Query: 807 DYW 809
           DYW
Sbjct: 680 DYW 682



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/445 (29%), Positives = 232/445 (52%), Gaps = 6/445 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +I+ YA  GR+  A+ +F+  PF+N  + + L+ GY++ G   E+ +L   +++  + 
Sbjct: 49  NNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSGYASSGRHKESLQL---LRVVDFG 105

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            ++Y L   +   +       G Q HGYA+K  F    +V   ++ MY +C  + +A  +
Sbjct: 106 MNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQRYVFNAVLYMYCQCAHMEDASKV 165

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F+    G +  A+ +MI GY   G    ++   R+M  E  + +  ++ ++L  CA++  
Sbjct: 166 FESVS-GFDAFAFNSMINGYLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVLGHCASMKD 224

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              GAQVH   L    E NVYV SAL+DMY KC  +  A R  E     N VSW +++  
Sbjct: 225 SVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTA 284

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           + +   +++AL LF  M    ++ ++FTY   LN  A    L    ++ + ++KTG   +
Sbjct: 285 YTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDH 344

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
             V+NAL++MY+K G+++ A  VF  M  +DV+SW  +ITG A+HG   E ++ F  M  
Sbjct: 345 LLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLS 404

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LVLVYAKCGCIN 489
           + + P +V    +LSACA+L +++         +K  G +      + +V +  + G ++
Sbjct: 405 AAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLD 464

Query: 490 DANR-VFDSMHTRDVITWTALIMGC 513
           +A R + ++    DV+ W +L+  C
Sbjct: 465 EAERFIVNNCIGTDVVAWRSLLNSC 489



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 182/354 (51%), Gaps = 5/354 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           + +N ++  Y     + +A K+F      + F ++S+I GY + G    +  +   M  E
Sbjct: 144 YVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMTGE 203

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
             +    +   VL  C+       G Q H  A+K   +LN +V + LVDMY KC  + +A
Sbjct: 204 AEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVHDA 263

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
              F++ P+ KN V+WT ++T Y+QN     A++ F DM +EGV+ N+FT+   L +CA 
Sbjct: 264 NRAFEVLPE-KNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALNSCAG 322

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           ++A   G  +  C++ +G   ++ V +AL++MY+K G ++ A R+     + + VSWN +
Sbjct: 323 LAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVSWNLI 382

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA-KSVHSLIVKTG 366
           I G+A  G  +E +  F  M +  +     T+  VL+  A    ++ A   +++++ + G
Sbjct: 383 ITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMMKEVG 442

Query: 367 FEGYKFVNNALIDMYAKQGNLDCA--FMVFNLMQDKDVISWTSLITGCAYHGSY 418
               K     ++ +  + G LD A  F+V N +   DV++W SL+  C  + +Y
Sbjct: 443 ITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCI-GTDVVAWRSLLNSCQVYKNY 495



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 120/255 (47%), Gaps = 3/255 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            Q  +K  + + +  + ++  Y     + +A + F   P KN  +W++++  Y+   L  
Sbjct: 233 AQALKKRLELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYE 292

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           +A +LF  M++EG +P+++T    L  C+    L+ G       +KT    +  V   L+
Sbjct: 293 DALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALM 352

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           +MY+K   I +A  +F   P  ++ V+W  +ITGY+ +G   + +E F  M    V  + 
Sbjct: 353 NMYSKSGSIEDAHRVFISMPL-RDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSY 411

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLE 294
            TF  +L+ACA +   D        ++   G        + ++ +  + G LD A R + 
Sbjct: 412 VTFVGVLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLDEAERFIV 471

Query: 295 YSEIDNE-VSWNSMI 308
            + I  + V+W S++
Sbjct: 472 NNCIGTDVVAWRSLL 486



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 5/115 (4%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE----TPFKNFFTW 101
           +S SG I++A ++F  M  RD  +WN +I  YA+ G  RE  + F+         ++ T+
Sbjct: 355 YSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTF 414

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
             ++   +  GL  EAF     M  E G  P +     ++ L    G L   E+F
Sbjct: 415 VGVLSACAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLDEAERF 469


>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53360, mitochondrial; Flags: Precursor
 gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
 gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 768

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 234/646 (36%), Positives = 379/646 (58%), Gaps = 3/646 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D    N +++ Y   G LR+A+++F+  P +N  +++S+I GYS  G   EA  L+ +M 
Sbjct: 101 DTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKML 160

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            E   P Q+   ++++ C+    +  G+Q H   IK     +      L+ MY +   + 
Sbjct: 161 QEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMS 220

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV-ESNQFTFPSILTA 244
           +A  +F   P  K+ ++W+++I G+SQ G+ F+A+   ++M   GV   N++ F S L A
Sbjct: 221 DASRVFYGIP-MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKA 279

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C+++   D+G+Q+HG  + S    N     +L DMYA+CG L+SARR+ +  E  +  SW
Sbjct: 280 CSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASW 339

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N +I G A  G+  EA+S+F +M +     D  +  S+L      + L+    +HS I+K
Sbjct: 340 NVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIK 399

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVF-NLMQDKDVISWTSLITGCAYHGSYEEALK 423
            GF     V N+L+ MY    +L C F +F +   + D +SW +++T C  H    E L+
Sbjct: 400 WGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLR 459

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            F  M +S   PDH+ + ++L  C E++ L+ G QVH   LK+G      + N L+ +YA
Sbjct: 460 LFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYA 519

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG +  A R+FDSM  RDV++W+ LI+G AQ+G G+EAL  + +M + G +P+++TFVG
Sbjct: 520 KCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVG 579

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           +L ACSH GL E     + +M   +GI P  +H +C++DLL R+G+L EA+  +D+M  E
Sbjct: 580 VLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLE 639

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
           PD  VWK LLSAC+  G++ L ++AA N+ +++P N+  +V L +M++++G WE+AA +R
Sbjct: 640 PDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLR 699

Query: 664 KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEI 709
             MK   ++K PG SW+E   ++HIF +ED  HP R DIY+ +  I
Sbjct: 700 SSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNI 745



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 164/569 (28%), Positives = 277/569 (48%), Gaps = 31/569 (5%)

Query: 121 FWQMQLEGYRPSQYTLDNVLRL---------CSLKGLLQRGEQFHGYAIKTCFDLNAFVV 171
           F++  LE +  +Q      +RL         CS    L +G + H + + +    +  + 
Sbjct: 46  FYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILN 105

Query: 172 TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV 231
             ++ MY KC  + +A  +F   P+ +N V++T++ITGYSQNG G +AI  +  M  E +
Sbjct: 106 NHILSMYGKCGSLRDAREVFDFMPE-RNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDL 164

Query: 232 ESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR 291
             +QF F SI+ ACA+ S    G Q+H  ++     +++  Q+ALI MY +   +  A R
Sbjct: 165 VPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASR 224

Query: 292 LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI-KIDDFTYPSVLNCFASNI 350
           +     + + +SW+S+I GF++ GF  EALS  K+M +  +   +++ + S L   +S +
Sbjct: 225 VFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLL 284

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
             +    +H L +K+   G      +L DMYA+ G L+ A  VF+ ++  D  SW  +I 
Sbjct: 285 RPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIA 344

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
           G A +G  +EA+  FS MR SG  PD + + S+L A  +   L  G Q+H+  +K G  +
Sbjct: 345 GLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLA 404

Query: 471 SLSVDNSLVLVYAKCGCINDANRVF-DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
            L+V NSL+ +Y  C  +     +F D  +  D ++W  ++  C Q+ +  E L+ +  M
Sbjct: 405 DLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLM 464

Query: 530 LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPG--PDHYA--CMIDLLG 585
           L    +PD+IT   LL  C      E +     S    Y +K G  P+ +    +ID+  
Sbjct: 465 LVSECEPDHITMGNLLRGC-----VEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYA 519

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL-----EPMNA 640
           + G L +A+ + D M    D   W  L+      G    GE A     E+     EP N 
Sbjct: 520 KCGSLGQARRIFDSM-DNRDVVSWSTLIVGYAQSG---FGEEALILFKEMKSAGIEP-NH 574

Query: 641 MPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
           + +V +    S  G  E+  ++   M++ 
Sbjct: 575 VTFVGVLTACSHVGLVEEGLKLYATMQTE 603



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 162/331 (48%), Gaps = 12/331 (3%)

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFK-KMHARDIKIDDFTYPSVLNCFASNIDLNN 354
           S I  E   N  I    +  F++EAL  F         KI   TY S++   +S+  L  
Sbjct: 26  STIKTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQ 85

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
            + +H  I+ +  +    +NN ++ MY K G+L  A  VF+ M +++++S+TS+ITG + 
Sbjct: 86  GRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQ 145

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
           +G   EA++ +  M    + PD     SI+ ACA  + +  G+Q+HA  +K    S L  
Sbjct: 146 NGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIA 205

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
            N+L+ +Y +   ++DA+RVF  +  +D+I+W+++I G +Q G   EAL    +ML+ G 
Sbjct: 206 QNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGV 265

Query: 535 -KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKP---GPDHYAC-MIDLLGRSGK 589
             P+   F   L ACS        R  + S      IK    G     C + D+  R G 
Sbjct: 266 FHPNEYIFGSSLKACSSL-----LRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGF 320

Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHG 620
           L  A+ + DQ +  PD   W  +++    +G
Sbjct: 321 LNSARRVFDQ-IERPDTASWNVIIAGLANNG 350



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 6/142 (4%)

Query: 20  IGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYA 78
           +G   + +++   + P   +   L+D ++  G + +A ++F+ M +RD  +W+T+I  YA
Sbjct: 491 LGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYA 550

Query: 79  NSGRLREAKKLFNETPF----KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQ 133
            SG   EA  LF E        N  T+  ++   S+ GL  E  +L+  MQ E G  P++
Sbjct: 551 QSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTK 610

Query: 134 YTLDNVLRLCSLKGLLQRGEQF 155
                V+ L +  G L   E+F
Sbjct: 611 EHCSCVVDLLARAGRLNEAERF 632


>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Brachypodium distachyon]
          Length = 707

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 258/702 (36%), Positives = 396/702 (56%), Gaps = 29/702 (4%)

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
           + ++LR  +    +  G Q HG  +K  F  +  +   L+DMYAKC  +  A  +F   P
Sbjct: 7   IADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMP 66

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMR-VEGVESNQFTFPSILTACAAVSARDFG 254
           + +N V+WT ++ G+ ++G   + +     MR +  V  N+FT  + L AC  V     G
Sbjct: 67  E-RNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAG 125

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
             +HG  + +GFE +  V ++L+ +Y+K G +  ARR+ + +   N V+WN+MI G+A  
Sbjct: 126 VWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHA 185

Query: 315 GFHKEALSLFKKMHAR-----DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE- 368
           G  +++L +F++M  R     D + D+FT+ S+L    S         VH+ +V  G   
Sbjct: 186 GHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVST 245

Query: 369 -GYKFVNNALIDMYAK-QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
                +  AL+DMY K +  L  A  VFN ++ K+ I WT++I G A  G  +EA++ F 
Sbjct: 246 ASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFG 305

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
               SG+  D  V+SS++   A+  ++E G+QVH   +K+     +SV NSL+ +Y KCG
Sbjct: 306 RFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCG 365

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
             ++A R F  +  R+V++WTA+I G  ++G G+EA+  +++M A G +PD + ++ LL 
Sbjct: 366 LTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLS 425

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ACSH+GL E  R YF ++     ++P  +HYACM+DLLGR+G+L EAK L+  M   P  
Sbjct: 426 ACSHSGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAPTV 485

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
            VW+ LLSACRVH ++ +G  A   L  ++  N + YV LSN+++ AG W +  RVR  M
Sbjct: 486 GVWQTLLSACRVHKNVTVGREAGETLLAIDGDNPVNYVMLSNIFAEAGDWRECQRVRGAM 545

Query: 667 KSRGIRKEPGCSWVETNSQVHIFI-SEDRGHPLRTDIYSKIDEIMLLIKEA-GYVPD--- 721
           + RG+RK+ GCSWVE   + H F    D  HP   DI   + ++   ++E  GY P    
Sbjct: 546 RRRGLRKQGGCSWVEVGKEAHFFYGGGDDSHPRAADICCVLRDVERTMRERLGYSPGSSS 605

Query: 722 --MNFALHNVEEEGKEIGLAYHSEKLAVAFGLLT------------LPQGAPIRIFKNLR 767
                ALH+V+EE +   L  HSE+LAV   LL               +   IR++KNLR
Sbjct: 606 SSSEAALHDVDEESRAESLRAHSERLAVGLWLLLHHDHDHGEGMGGTKRKEVIRVYKNLR 665

Query: 768 VCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           VCGDCH   K +S+V  R +++RD+NRFH F+ G CSC DYW
Sbjct: 666 VCGDCHEFFKGLSSVVGRVLVVRDANRFHRFEDGVCSCKDYW 707



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 134/401 (33%), Positives = 209/401 (52%), Gaps = 16/401 (3%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D    N +I  YA  G LR A ++F   P +N  +W++L+ G+  +G   E   L   M+
Sbjct: 38  DTMLGNNLIDMYAKCGELRMAGEVFGGMPERNVVSWTALMVGFLRHGDARECLRLLGAMR 97

Query: 126 -LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
            L    P+++TL   L+ C + G +  G   HG  ++  F+ +  V   LV +Y+K   I
Sbjct: 98  SLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGHHVVANSLVLLYSKGGRI 157

Query: 185 FEAEYLFKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRV-----EGVESNQF 236
            +A  +F    DG   +N V W  MI+GY+  G+G  ++  FR+M+      E  + ++F
Sbjct: 158 GDARRVF----DGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEF 213

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFE--ANVYVQSALIDMYAKCG-DLDSARRLL 293
           TF S+L AC ++ A   GAQVH  ++  G    +N  +  AL+DMY KC   L  A ++ 
Sbjct: 214 TFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVF 273

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
              E  N + W ++IVG A++G  KEA+ LF +  +  ++ D     SV+  FA    + 
Sbjct: 274 NRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVE 333

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
             + VH   VKT       V N+LIDMY K G  D A   F  +  ++V+SWT++I G  
Sbjct: 334 QGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMINGLG 393

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLE 454
            HG  +EA+  F +MR  G+ PD V   ++LSAC+   ++E
Sbjct: 394 KHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVE 434



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 206/432 (47%), Gaps = 25/432 (5%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL---- 126
           N+++  Y+  GR+ +A+++F+ T F+N  TW+++I GY++ G   ++  +F +MQ     
Sbjct: 145 NSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQE 204

Query: 127 -EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDL--NAFVVTGLVDMYAKCKC 183
            E ++P ++T  ++L+ C   G  + G Q H   +        NA +   L+DMY KC+C
Sbjct: 205 EEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRC 264

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +           + KN + WTT+I G++Q G   +A+E F      GV ++     S++ 
Sbjct: 265 LLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVG 324

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
             A  +  + G QVH   + +    +V V ++LIDMY KCG  D A R        N VS
Sbjct: 325 VFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVS 384

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI- 362
           W +MI G  + G  +EA+ +F++M A  ++ D+  Y ++L+  + +  +   +   S I 
Sbjct: 385 WTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVEECRRYFSAIR 444

Query: 363 ----VKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGS 417
               ++   E Y      ++D+  + G L  A  +V  +     V  W +L++ C  H +
Sbjct: 445 HDRRLRPRAEHYA----CMVDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLSACRVHKN 500

Query: 418 Y---EEALKYFSDMRISGICP-DHVVVSSILSACAELTVLE--FGQQVHAVFLKSGGCSS 471
                EA +    + I G  P ++V++S+I +   +    +   G        K GGCS 
Sbjct: 501 VTVGREAGETL--LAIDGDNPVNYVMLSNIFAEAGDWRECQRVRGAMRRRGLRKQGGCSW 558

Query: 472 LSVDNSLVLVYA 483
           + V       Y 
Sbjct: 559 VEVGKEAHFFYG 570



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 3/178 (1%)

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
           +++ +L A A  + +  G Q+H   LK G  S   + N+L+ +YAKCG +  A  VF  M
Sbjct: 6   MIADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGM 65

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLA-RGTKPDYITFVGLLFACSHAGLAENA 557
             R+V++WTAL++G  ++G  +E L+    M +     P+  T    L AC   G     
Sbjct: 66  PERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAG 125

Query: 558 RWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
            W   +  +  G +        ++ L  + G++ +A+ + D  V   +   W A++S 
Sbjct: 126 VWIHGACVRA-GFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFR-NLVTWNAMISG 181


>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 624

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 235/572 (41%), Positives = 356/572 (62%), Gaps = 1/572 (0%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           + ++L  C        G  VHG ++ S F  ++ + + L++MYAKCG L+ AR++ +   
Sbjct: 54  YNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMP 113

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
             + V+W ++I G+++     +AL LF +M       ++FT  SV+   A+         
Sbjct: 114 ERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQ 173

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           +H   VK GF+    V +AL+D+Y + G +D A +VF+ ++ ++ +SW +LI G A    
Sbjct: 174 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCG 233

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
            E+AL+ F  M   G  P H   +S+  AC+    LE G+ VHA  +KSG        N+
Sbjct: 234 TEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 293

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
           L+ +YAK G I+DA ++FD +  RDV++W +L+   AQ+G G EA+ ++++M   G +P+
Sbjct: 294 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPN 353

Query: 538 YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALL 597
            I+F+ +L ACSH+GL +    Y+E M K  GI     HY  ++DLLGR+G L  A   +
Sbjct: 354 EISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVLEAWHYVTIVDLLGRAGDLNRALRFI 412

Query: 598 DQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWE 657
           ++M  EP A +WKALL+ACR+H + ELG  AA ++FEL+P +  P+V L N+Y++ G+W 
Sbjct: 413 EEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWN 472

Query: 658 DAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAG 717
           DAARVRK MK  G++KEP CSWVE  + +H+F++ D  HP R +I  K +E++  IKE G
Sbjct: 473 DAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELG 532

Query: 718 YVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMK 777
           YVPD +  + +V+++ +E+ L YHSEK+A+AF LL  P G+ I I KN+RVCGDCH+A+K
Sbjct: 533 YVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHSAIK 592

Query: 778 YISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             S    R II+RD+NRFHHFK G CSC DYW
Sbjct: 593 LASKAVGREIIVRDTNRFHHFKDGACSCKDYW 624



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/391 (34%), Positives = 215/391 (54%), Gaps = 4/391 (1%)

Query: 126 LEG-YRPSQYTLDN-VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           LEG Y P      N +L+ C++  LL +G   HG+ I++ F  +  +   L++MYAKC  
Sbjct: 42  LEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGS 101

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + EA  +F   P+ ++ V WTT+I+GYSQ+   F A+  F  M   G   N+FT  S++ 
Sbjct: 102 LEEARKVFDKMPE-RDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIK 160

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           A AA      G Q+HG  +  GF++NV+V SAL+D+Y + G +D A+ + +  E  N+VS
Sbjct: 161 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 220

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN++I G AR+   ++AL LF+ M     +   F+Y S+    +S   L   K VH+ ++
Sbjct: 221 WNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 280

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K+G +   F  N L+DMYAK G++  A  +F+ +  +DV+SW SL+T  A HG   EA+ 
Sbjct: 281 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVC 340

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
           +F +MR  GI P+ +   S+L+AC+   +L+ G   + +  K G         ++V +  
Sbjct: 341 WFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLG 400

Query: 484 KCGCINDANRVFDSMHTRDVIT-WTALIMGC 513
           + G +N A R  + M        W AL+  C
Sbjct: 401 RAGDLNRALRFIEEMPIEPTAAIWKALLNAC 431



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 213/398 (53%), Gaps = 12/398 (3%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G L + +   D    NT++  YA  G L EA+K+F++ P ++F TW++LI GYS +    
Sbjct: 75  GHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPF 134

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           +A  LF QM   G+ P+++TL +V++  + +     G Q HG+ +K  FD N  V + L+
Sbjct: 135 DALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALL 194

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           D+Y +   + +A+ +F    + +N V+W  +I G+++     KA+E F+ M  EG   + 
Sbjct: 195 DLYTRYGLMDDAQLVFDAL-ESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSH 253

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
           F++ S+  AC++    + G  VH  ++ SG +   +  + L+DMYAK G +  AR++ + 
Sbjct: 254 FSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDR 313

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               + VSWNS++  +A+ GF  EA+  F++M    I+ ++ ++ SVL   + +  L+  
Sbjct: 314 LAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEG 373

Query: 356 KSVHSLIVKTG--FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGC 412
              + L+ K G   E + +V   ++D+  + G+L+ A      M  +   + W +L+  C
Sbjct: 374 WHYYELMKKDGIVLEAWHYVT--IVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNAC 431

Query: 413 AYHGSYEEALKYFSDMRISGICPD----HVVVSSILSA 446
             H + E  L  ++   +  + PD    HV++ +I ++
Sbjct: 432 RMHKNTE--LGAYAAEHVFELDPDDPGPHVILYNIYAS 467



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 108/221 (48%), Gaps = 23/221 (10%)

Query: 417 SYEEALKYFS-DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           S +E+LK+ S D+  S I  D    +++L  C    +L  G+ VH   ++S     L ++
Sbjct: 30  SDDESLKFPSNDLEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMN 89

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           N+L+ +YAKCG + +A +VFD M  RD +TWT LI G +Q+ +  +AL  ++QML  G  
Sbjct: 90  NTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFS 149

Query: 536 PDYITFVGLLFA--------CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRS 587
           P+  T   ++ A        C H       +  F+S   V          + ++DL  R 
Sbjct: 150 PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV---------GSALLDLYTRY 200

Query: 588 GKLIEAKALLDQMVGEPDATVWKALLSA----CRVHGDLEL 624
           G + +A+ + D +    D + W AL++     C     LEL
Sbjct: 201 GLMDDAQLVFDALESRNDVS-WNALIAGHARRCGTEKALEL 240



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 70/170 (41%), Gaps = 31/170 (18%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  L  ++ SG I +A ++F++++ RD  +WN+++ AYA                     
Sbjct: 292 NTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQ-------------------- 331

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
                 +G+ N     EA   F +M+  G RP++ +  +VL  CS  GLL  G  ++   
Sbjct: 332 ------HGFGN-----EAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELM 380

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
            K    L A+    +VD+  +   +  A    +  P       W  ++  
Sbjct: 381 KKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNA 430


>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 253/681 (37%), Positives = 386/681 (56%), Gaps = 9/681 (1%)

Query: 134 YTLDNVLRLCSLKGLLQRGEQFHGYAIKT-CFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
           +T   +LR     G      Q H  A++      +AF    LV  Y +   + +A   F 
Sbjct: 72  FTFPPLLRAAQGPGT---AAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFD 128

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
                ++  AW  M++G  +N    +A+  F  M +EGV  +  T  S+L  C  +  R 
Sbjct: 129 EMRH-RDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRA 187

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
               +H   +  G +  ++V +A+ID+Y K G L+  R++ +     + V+WNS+I G  
Sbjct: 188 LALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHE 247

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE-GYK 371
           + G    A+ +F  M    +  D  T  S+ +  A   D+   +SVH  +V+ G++ G  
Sbjct: 248 QGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDI 307

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM-RI 430
              NA++DMYAK   ++ A  +F+ M  +D +SW +LITG   +G   EA+  +  M + 
Sbjct: 308 IAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKH 367

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
            G+ P      S+L A + L  L+ G ++HA+ +K+G    + V   ++ +YAKCG +++
Sbjct: 368 EGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDE 427

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           A  +F+    R    W A+I G   +G G +AL  + QM   G  PD++TFV LL ACSH
Sbjct: 428 AMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSH 487

Query: 551 AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
           AGL +  R +F  M   YGIKP   HYACM+D+ GR+G+L +A   +  M  +PD+ +W 
Sbjct: 488 AGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWG 547

Query: 611 ALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRG 670
           ALL ACR+HG++E+G+ A+ NLFEL+P N   YV +SNMY+  GKW+    VR L++ + 
Sbjct: 548 ALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQN 607

Query: 671 IRKEPGCSWVETNSQVHIFISEDRG--HPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHN 728
           ++K PG S +E    V++F S ++   HP   +I  ++ +++  I+  GYVPD +F L +
Sbjct: 608 LQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDLLAKIRSLGYVPDYSFVLQD 667

Query: 729 VEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHII 788
           VEE+ KE  L  HSE+LA+AFG++  P   P+ I+KNLRVCGDCH A KYIS +  R II
Sbjct: 668 VEEDEKEQILNNHSERLAIAFGIINTPPRTPLHIYKNLRVCGDCHNATKYISKITEREII 727

Query: 789 LRDSNRFHHFKAGNCSCGDYW 809
           +RDSNRFHHFK G CSCGD+W
Sbjct: 728 VRDSNRFHHFKDGYCSCGDFW 748



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 135/466 (28%), Positives = 233/466 (50%), Gaps = 8/466 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F    ++ AY   GR+R+A + F+E   ++   W++++ G        EA  LF +M 
Sbjct: 103 DAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMV 162

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           +EG      T+ +VL +C L G        H YA+K   D   FV   ++D+Y K   + 
Sbjct: 163 MEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLE 222

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           E   +F      ++ V W ++I+G+ Q G    A+E F  MR  GV  +  T  S+ +A 
Sbjct: 223 EVRKVFDGM-SSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAI 281

Query: 246 AAVSARDFGAQVHGCILSSGFE-ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           A       G  VH  ++  G++  ++   +A++DMYAK   +++A+R+ +   + + VSW
Sbjct: 282 AQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSW 341

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           N++I G+ + G   EA+ ++  M   + +K    T+ SVL  ++    L     +H+L +
Sbjct: 342 NTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSI 401

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           KTG     +V   +ID+YAK G LD A ++F     +    W ++I+G   HG   +AL 
Sbjct: 402 KTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALS 461

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LVLVY 482
            FS M+  GI PDHV   S+L+AC+   +++ G+    +   + G   ++   + +V ++
Sbjct: 462 LFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMF 521

Query: 483 AKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGK---GKEALQ 524
            + G ++DA     +M  + D   W AL+  C  +G    GK A Q
Sbjct: 522 GRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQ 567



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/371 (31%), Positives = 180/371 (48%), Gaps = 27/371 (7%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D + F  N MI  Y   G L E +K+F+    ++  TW+S+I G+   G    A E+F  
Sbjct: 202 DDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCG 261

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV-TGLVDMYAKCK 182
           M+  G  P   TL ++    +  G +  G   H Y ++  +D+   +    +VDMYAK  
Sbjct: 262 MRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLS 321

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSI 241
            I  A+ +F   P  ++ V+W T+ITGY QNG   +AI  +  M + EG++  Q TF S+
Sbjct: 322 KIEAAQRMFDSMPV-RDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSV 380

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           L A + + A   G ++H   + +G   +VYV + +ID+YAKCG LD A  L E +   + 
Sbjct: 381 LPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRST 440

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
             WN++I G    G   +ALSLF +M    I  D  T+ S+L           A   H+ 
Sbjct: 441 GPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLL-----------AACSHAG 489

Query: 362 IVKTGFEGYKFVNNA------------LIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSL 408
           +V  G   +  +  A            ++DM+ + G LD AF  + N+    D   W +L
Sbjct: 490 LVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGAL 549

Query: 409 ITGCAYHGSYE 419
           +  C  HG+ E
Sbjct: 550 LGACRIHGNVE 560


>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 643

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 245/630 (38%), Positives = 363/630 (57%), Gaps = 22/630 (3%)

Query: 202 AWTTMITGYSQNGYGFKAIECFRDMR--VEGVESNQFTFPSILTACAAVSARDFGAQVHG 259
           +W   I   +  G    AI  F  MR  V    S   + P+ L +CA +      A +H 
Sbjct: 14  SWAYQIRMAASQGQFLHAISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHA 73

Query: 260 CILSSGFEANVYVQSALIDMYAKC---------------GDLDSA-----RRLLEYSEID 299
             + SG  A+ +  +AL+++  K                G L+SA     R++ +     
Sbjct: 74  LAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLER 133

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           + VSWN++I+G A    H+EALS+ ++M       D FT  +VL  FA   D+     VH
Sbjct: 134 DAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVH 193

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
              +K GF+   FV ++LIDMYA    +D +  VF+   D D + W S++ G A +GS E
Sbjct: 194 GYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVE 253

Query: 420 EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
           EAL  F  M  +G+ P  V  SS++ A   L++L  G+Q+HA  +++    ++ + +SL+
Sbjct: 254 EALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLI 313

Query: 480 LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
            +Y KCG ++ A RVF+ + + D+++WTA+IMG A +G   EA   +++M     KP++I
Sbjct: 314 DMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHI 373

Query: 540 TFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ 599
           TF+ +L ACSHAGL +N   YF SM   YG  P  +H A + D LGR+G L EA   + +
Sbjct: 374 TFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISE 433

Query: 600 MVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDA 659
           M  +P ++VW  LL ACRVH +  L E  A  +FELEP +   +V LSNMYS +G+W +A
Sbjct: 434 MKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNEA 493

Query: 660 ARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYV 719
           A++RK M+ +G++KEP CSW+E  +++H+FI+ D+ HP    I   ++     +   GYV
Sbjct: 494 AQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYSEQMIRQGYV 553

Query: 720 PDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYI 779
           P+M   L ++EEE K   L  HSEKLA+ FG+++ P G  IR+ KNLRVC DCH A K+I
Sbjct: 554 PNMEDVLQDIEEEQKREVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHIATKFI 613

Query: 780 SAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           S +  R I++RD NRFH FK GNCSCGD+W
Sbjct: 614 SKIVAREIVVRDVNRFHRFKDGNCSCGDFW 643



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/422 (30%), Positives = 218/422 (51%), Gaps = 11/422 (2%)

Query: 87  KKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLK 146
           +K+F+E   ++  +W++LI G + +    EA  +  +M  +G+ P  +TL  VL + +  
Sbjct: 124 RKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAEC 183

Query: 147 GLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTM 206
             ++RG   HGYAIK  FD + FV + L+DMYA C  +  +  +F  F D  + V W +M
Sbjct: 184 ADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDC-DAVLWNSM 242

Query: 207 ITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF 266
           + GY+QNG   +A+  FR M   GV     TF S++ A   +S    G Q+H  ++ + F
Sbjct: 243 LAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARF 302

Query: 267 EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK 326
             N+++ S+LIDMY KCG++D ARR+    +  + VSW +MI+G+A  G   EA  LF++
Sbjct: 303 NDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFER 362

Query: 327 MHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           M   ++K +  T+ +VL  C  + +  N  K  +S+  + GF        AL D   + G
Sbjct: 363 MELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAG 422

Query: 386 NLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSY---EEALKYFSDMRISGICPDHVVVS 441
           +LD A+   + M+ K   S W++L+  C  H +    EE  K   ++    +   HV++S
Sbjct: 423 DLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSM-GSHVILS 481

Query: 442 SILSACA---ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
           ++ SA     E   L    ++  +  K   CS + V N L +  A        +R+ D++
Sbjct: 482 NMYSASGRWNEAAQLRKSMRIKGM-KKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDAL 540

Query: 499 HT 500
           + 
Sbjct: 541 NV 542



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 215/437 (49%), Gaps = 23/437 (5%)

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQY--TLDNVLRLCSLKGLLQRGEQFHG 157
           +W+  I   ++ G  + A  LF QM+      S    +L   L+ C+  GL       H 
Sbjct: 14  SWAYQIRMAASQGQFLHAISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHA 73

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEA-----------------EYLFKMFPD--GK 198
            AI++    + F    L+++  K                        E + K+F +   +
Sbjct: 74  LAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLER 133

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           + V+W T+I G +++    +A+   R+M  +G   + FT  ++L   A  +    G  VH
Sbjct: 134 DAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVH 193

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
           G  + +GF+ +V+V S+LIDMYA C  +D + ++ +     + V WNSM+ G+A+ G  +
Sbjct: 194 GYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVE 253

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           EAL +F++M    ++    T+ S++  F +   L   K +H+ +++  F    F++++LI
Sbjct: 254 EALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLI 313

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
           DMY K GN+D A  VFN +Q  D++SWT++I G A HG   EA   F  M +  + P+H+
Sbjct: 314 DMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHI 373

Query: 439 VVSSILSACAELTVLEFG-QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
              ++L+AC+   +++ G +  +++  + G   SL    +L     + G +++A      
Sbjct: 374 TFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISE 433

Query: 498 MHTRDVIT-WTALIMGC 513
           M  +   + W+ L+  C
Sbjct: 434 MKIKPTSSVWSTLLRAC 450



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 124/247 (50%), Gaps = 3/247 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D F  +++I  YAN  ++  + K+F+     +   W+S++ GY+  G   EA  +F +
Sbjct: 202 DNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRR 261

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M   G RP   T  +++       LL+ G+Q H Y I+  F+ N F+ + L+DMY KC  
Sbjct: 262 MLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGN 321

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +  A  +F       + V+WT MI GY+ +G   +A   F  M +  V+ N  TF ++LT
Sbjct: 322 VDIARRVFNGI-QSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLT 380

Query: 244 ACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           AC+     D G +    + +  GF  ++   +AL D   + GDLD A   +   +I    
Sbjct: 381 ACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTS 440

Query: 303 S-WNSMI 308
           S W++++
Sbjct: 441 SVWSTLL 447


>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 265/743 (35%), Positives = 409/743 (55%), Gaps = 8/743 (1%)

Query: 66   DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
            D F  N +++ Y   G + +A +LF+  P +N  +W+S+I  +S+ G   E+F L  +M 
Sbjct: 576  DVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMM 635

Query: 126  LE----GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
             E     + P   TL  VL +C+ +  +  G+  HG+A+K   D    +   L+DMY+KC
Sbjct: 636  EENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKC 695

Query: 182  KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV--EGVESNQFTFP 239
             CI  A+ +FKM  + KN V+W TM+ G+S  G      +  R M    E V++++ T  
Sbjct: 696  GCITNAQMIFKM-NNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTIL 754

Query: 240  SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
            + +  C   S      ++H   L   F  N  V +A +  YAKCG L  A+R+       
Sbjct: 755  NAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSK 814

Query: 300  NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
               SWN++I G A+    + +L    +M    +  D FT  S+L+  +    L   K VH
Sbjct: 815  TVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVH 874

Query: 360  SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
              I++   E   FV  +++ +Y   G L     +F+ M+DK ++SW ++ITG   +G  +
Sbjct: 875  GFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPD 934

Query: 420  EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
             AL  F  M + GI    + +  +  AC+ L  L  G++ HA  LK        +  SL+
Sbjct: 935  RALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLI 994

Query: 480  LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
             +YAK G I  +++VF+ +  +   +W A+IMG   +G  KEA++ +++M   G  PD +
Sbjct: 995  DMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDL 1054

Query: 540  TFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA-KALLD 598
            TF+G+L AC+H+GL      Y + M   +G+KP   HYAC+ID+LGR+G+L +A + + +
Sbjct: 1055 TFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAE 1114

Query: 599  QMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWED 658
            +M  E D  +WK+LLS+CR+H +LE+GE+ A  LFELEP     YV LSN+Y+  GKWED
Sbjct: 1115 EMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWED 1174

Query: 659  AARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGY 718
              +VR+ M    +RK+ GCSW+E N +V  F+  +R      +I S    + + I + GY
Sbjct: 1175 VRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGY 1234

Query: 719  VPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKY 778
             PD     H++ EE K   L  HSEKLA+ +GL+   +G  IR++KNLR+C DCH A K 
Sbjct: 1235 RPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKL 1294

Query: 779  ISAVYLRHIILRDSNRFHHFKAG 801
            IS V  R I++RD+ RFHHFK G
Sbjct: 1295 ISKVMEREIVVRDNKRFHHFKNG 1317



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 162/567 (28%), Positives = 273/567 (48%), Gaps = 20/567 (3%)

Query: 66   DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM- 124
            D      +I  YA  G   +++ +F+    KN F W+++I  YS   L  E  E F +M 
Sbjct: 474  DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 533

Query: 125  QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
                  P  +T   V++ C+    +  G   HG  +KT    + FV   LV  Y     +
Sbjct: 534  STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 593

Query: 185  FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE----SNQFTFPS 240
             +A  LF + P+ +N V+W +MI  +S NG+  ++     +M  E  +     +  T  +
Sbjct: 594  TDALQLFDIMPE-RNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVT 652

Query: 241  ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
            +L  CA       G  VHG  +    +  + + +AL+DMY+KCG + +A+ + + +   N
Sbjct: 653  VLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKN 712

Query: 301  EVSWNSMIVGFARQGFHKEALSLFKKMHA--RDIKIDDFT-YPSVLNCFASNIDLNNAKS 357
             VSWN+M+ GF+ +G       + ++M A   D+K D+ T   +V  CF  +  L + K 
Sbjct: 713  VVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF-LPSLKE 771

Query: 358  VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
            +H   +K  F   + V NA +  YAK G+L  A  VF+ ++ K V SW +LI G A    
Sbjct: 772  LHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSND 831

Query: 418  YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
               +L     M+ISG+ PD   V S+LSAC++L  L  G++VH   +++     L V  S
Sbjct: 832  PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLS 891

Query: 478  LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
            ++ +Y  CG +     +FD+M  + +++W  +I G  QNG    AL  + QM+  G +  
Sbjct: 892  VLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLC 951

Query: 538  YITFVGLLFACSHAGLAENARWYFESMDKVYGIK---PGPDHYAC-MIDLLGRSGKLIEA 593
             I+ + +  ACS   L  + R   E+    Y +K         AC +ID+  ++G + ++
Sbjct: 952  GISMMPVFGACS---LLPSLRLGREA--HAYALKHLLEDDAFIACSLIDMYAKNGSITQS 1006

Query: 594  KALLDQMVGEPDATVWKALLSACRVHG 620
              + + +  E     W A++    +HG
Sbjct: 1007 SKVFNGL-KEKSTASWNAMIMGYGIHG 1032



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 154/318 (48%), Gaps = 8/318 (2%)

Query: 241 ILTACAAVSARDFGAQVHGCIL-SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
           +L A       + G ++H  +  S+    +  + + +I MYA CG  D +R + +     
Sbjct: 445 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 504

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKM-HARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
           N   WN++I  ++R   + E L  F +M    D+  D FTYP V+   A   D+    +V
Sbjct: 505 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 564

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           H L+VKTG     FV NAL+  Y   G +  A  +F++M +++++SW S+I   + +G  
Sbjct: 565 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 624

Query: 419 EEALKYFSDMRIS----GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
           EE+     +M          PD   + ++L  CA    +  G+ VH   +K      L +
Sbjct: 625 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 684

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG- 533
           +N+L+ +Y+KCGCI +A  +F   + ++V++W  ++ G +  G          QMLA G 
Sbjct: 685 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 744

Query: 534 -TKPDYITFVGLLFACSH 550
             K D +T +  +  C H
Sbjct: 745 DVKADEVTILNAVPVCFH 762



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 126/248 (50%), Gaps = 4/248 (1%)

Query: 64   DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
            +RD F + ++++ Y + G L   + LF+    K+  +W+++I GY   G    A  +F Q
Sbjct: 883  ERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQ 942

Query: 124  MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
            M L G +    ++  V   CSL   L+ G + H YA+K   + +AF+   L+DMYAK   
Sbjct: 943  MVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGS 1002

Query: 184  IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
            I ++  +F    + K+  +W  MI GY  +G   +AI+ F +M+  G   +  TF  +LT
Sbjct: 1003 ITQSSKVFNGLKE-KSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLT 1061

Query: 244  ACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLL--EYSEIDN 300
            AC        G +    + SS G + N+   + +IDM  + G LD A R++  E SE  +
Sbjct: 1062 ACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEAD 1121

Query: 301  EVSWNSMI 308
               W S++
Sbjct: 1122 VGIWKSLL 1129


>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
          Length = 634

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 247/635 (38%), Positives = 377/635 (59%), Gaps = 3/635 (0%)

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           MY+K      A  + ++ P  +N V+WT++I+G +QNG+   A+  F +MR EGV  N F
Sbjct: 1   MYSKLDHPESARLVLRLTP-ARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDF 59

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           TFP    A A++     G Q+H   +  G   +V+V  +  DMY K    D AR+L +  
Sbjct: 60  TFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEI 119

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              N  +WN+ I      G  +EA+  F +    D   +  T+ + LN  +  + LN   
Sbjct: 120 PERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGM 179

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H L++++GF+    V N LID Y K   +  + ++F  M  K+ +SW SL+     + 
Sbjct: 180 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNH 239

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
             E+A   +   R   +     ++SS+LSACA +  LE G+ +HA  +K+    ++ V +
Sbjct: 240 EDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGS 299

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG--T 534
           +LV +Y KCGCI D+ + FD M  ++++T  +LI G A  G+   AL  +++M  RG   
Sbjct: 300 ALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGP 359

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAK 594
            P+Y+TFV LL ACS AG  EN    F+SM   YGI+PG +HY+C++D+LGR+G +  A 
Sbjct: 360 TPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAY 419

Query: 595 ALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAG 654
             + +M  +P  +VW AL +ACR+HG  +LG  AA NLF+L+P ++  +V LSN ++ AG
Sbjct: 420 EFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAG 479

Query: 655 KWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIK 714
           +W +A  VR+ +K  GI+K  G SW+   +QVH F ++DR H L  +I + + ++   ++
Sbjct: 480 RWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEME 539

Query: 715 EAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHT 774
            AGY PD+  +L+++EEE K   +++HSEKLA+AFGLL+LP   PIRI KNLR+CGDCH+
Sbjct: 540 AAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHS 599

Query: 775 AMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             K++S    R II+RD+NRFH FK G CSC DYW
Sbjct: 600 FFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 634



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 214/451 (47%), Gaps = 5/451 (1%)

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
           Y+       A+ +   TP +N  +W+SLI G +  G    A   F++M+ EG  P+ +T 
Sbjct: 2   YSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTF 61

Query: 137 DNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD 196
               +  +   L   G+Q H  A+K    L+ FV     DMY K +   +A  LF   P+
Sbjct: 62  PCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPE 121

Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
            +N   W   I+    +G   +AIE F + R      N  TF + L AC+     + G Q
Sbjct: 122 -RNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 180

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           +HG +L SGF+ +V V + LID Y KC  + S+  +       N VSW S++  + +   
Sbjct: 181 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 240

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
            ++A  L+ +     ++  DF   SVL+  A    L   +S+H+  VK   E   FV +A
Sbjct: 241 DEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSA 300

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM--RISGIC 434
           L+DMY K G ++ +   F+ M +K++++  SLI G A+ G  + AL  F +M  R  G  
Sbjct: 301 LVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPT 360

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL-VYAKCGCINDANR 493
           P+++   S+LSAC+    +E G ++      + G    +   S ++ +  + G +  A  
Sbjct: 361 PNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYE 420

Query: 494 VFDSMHTRDVIT-WTALIMGCAQNGKGKEAL 523
               M  +  I+ W AL   C  +GK +  L
Sbjct: 421 FIKKMPIQPTISVWGALQNACRMHGKPQLGL 451



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 204/417 (48%), Gaps = 20/417 (4%)

Query: 82  RLRE-AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVL 140
           RLR+ A+KLF+E P +N  TW++ I      G   EA E F + +     P+  T    L
Sbjct: 107 RLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFL 166

Query: 141 RLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNH 200
             CS    L  G Q HG  +++ FD +  V  GL+D Y KCK I  +E +F      KN 
Sbjct: 167 NACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEM-GTKNA 225

Query: 201 VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
           V+W +++  Y QN    KA   +   R + VE++ F   S+L+ACA ++  + G  +H  
Sbjct: 226 VSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAH 285

Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEA 320
            + +  E  ++V SAL+DMY KCG ++ + +  +     N V+ NS+I G+A QG    A
Sbjct: 286 AVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMA 345

Query: 321 LSLFKKMHARDI--KIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
           L+LF++M  R      +  T+ S+L+ C  +    N  K   S+    G E      + +
Sbjct: 346 LALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCI 405

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEAL-----KYFSDMRIS 431
           +DM  + G ++ A+     M  +  IS W +L   C  HG  +  L      +  D + S
Sbjct: 406 VDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDS 465

Query: 432 GICPDHVVVSSILSAC---AELTVLEFGQQVHAVFLKSG-GCSSLSVDNSLVLVYAK 484
           G   +HV++S+  +A    AE   +   +++  V +K G G S ++V N +    AK
Sbjct: 466 G---NHVLLSNTFAAAGRWAEANTVR--EELKGVGIKKGAGYSWITVKNQVHAFQAK 517



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 121/248 (48%), Gaps = 5/248 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D    N +I  Y    ++R ++ +F E   KN  +W SL+  Y     D +A  L+ +
Sbjct: 191 DTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLR 250

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
            + +    S + + +VL  C+    L+ G   H +A+K C +   FV + LVDMY KC C
Sbjct: 251 SRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGC 310

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM--RVEGVESNQFTFPSI 241
           I ++E  F   P+ KN V   ++I GY+  G    A+  F +M  R  G   N  TF S+
Sbjct: 311 IEDSEQAFDEMPE-KNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSL 369

Query: 242 LTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           L+AC+   A + G ++   + S+ G E      S ++DM  + G ++ A   ++   I  
Sbjct: 370 LSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQP 429

Query: 301 EVS-WNSM 307
            +S W ++
Sbjct: 430 TISVWGAL 437



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 18/196 (9%)

Query: 20  IGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYA 78
           +G + + H V   V+    +  ALVD +   G I+++ Q F++M +++  T N++I  YA
Sbjct: 278 LGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYA 337

Query: 79  NSGRLREAKKLFNET------PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRP 131
           + G++  A  LF E       P  N+ T+ SL+   S  G      ++F  M+   G  P
Sbjct: 338 HQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEP 397

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD----MYAKCKC-IFE 186
                  ++ +    G+++R  +F    IK         V G +     M+ K +  +  
Sbjct: 398 GAEHYSCIVDMLGRAGMVERAYEF----IKKMPIQPTISVWGALQNACRMHGKPQLGLLA 453

Query: 187 AEYLFKMFP-DGKNHV 201
           AE LFK+ P D  NHV
Sbjct: 454 AENLFKLDPKDSGNHV 469


>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Brachypodium distachyon]
          Length = 647

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 228/541 (42%), Positives = 329/541 (60%)

Query: 269 NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH 328
           NV   + LI    K GDL SAR L +     N  +WN+M+ G    G  +++L  F  M 
Sbjct: 107 NVMSWNILIGGCIKNGDLGSARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMR 166

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD 388
              +  D+F   SV  C A  +D+ + + VH+ +V++G +    V N+L  MY + G L 
Sbjct: 167 REGMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLA 226

Query: 389 CAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
               V   +    ++S+ + I G   +G  E AL+YFS MR   + PD V   S +S C+
Sbjct: 227 EGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCS 286

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
           +L  L  GQQVHA  +K+G    + V  SLV +Y++CGC+ D+ RV+D     D+   +A
Sbjct: 287 DLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSA 346

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
           +I  C  +G+G +A++ + QM+  G +P+ +TF+ LL+ACSH+GL +    +FE M K Y
Sbjct: 347 MISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTKTY 406

Query: 569 GIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
           G +P   HY C++DLLGRSG L EA+AL+  M    D  +WK LLSAC+   + ++ ER 
Sbjct: 407 GFQPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLSACKTQKNFDMAERI 466

Query: 629 ANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHI 688
           A  + E +P ++ PYV LSN+ +T+ +W D   VRK+M+ + IRKEPG SWVE   QVH 
Sbjct: 467 AERVIESDPRDSAPYVLLSNIRATSKRWGDVTEVRKIMREKDIRKEPGVSWVEHKGQVHQ 526

Query: 689 FISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVA 748
           F + D+ HP + +I   + E+M  I++ GY PDM    H++E+E KE+ L +HSEKLA+A
Sbjct: 527 FCTGDKSHPRQGEIDEYLKEMMGKIRQCGYAPDMTMVFHDMEDEEKEVSLTHHSEKLAIA 586

Query: 749 FGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDY 808
           F  L LP+G PIR+ KNLRVC DCH A+K IS V  R I++RD +RFHHF+ G CSCGDY
Sbjct: 587 FAFLNLPEGVPIRVMKNLRVCDDCHVAIKLISQVTGREIVVRDVSRFHHFRDGRCSCGDY 646

Query: 809 W 809
           W
Sbjct: 647 W 647



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 204/387 (52%), Gaps = 9/387 (2%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  L+ +++ G++  A  LFE +S R+  +WN +I     +G L  A++LF++ P +N  
Sbjct: 81  NNLLLAYADLGDLPTARHLFEGISKRNVMSWNILIGGCIKNGDLGSARELFDKMPTRNVA 140

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQ--RGEQFHG 157
           TW++++ G +N GLD ++ + F  M+ EG  P ++ L +V R C+  GLL    G Q H 
Sbjct: 141 TWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVFRCCA--GLLDVVSGRQVHA 198

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
           Y +++  D +  V   L  MY +C C+ E E + +  P     V++ T I G +QNG   
Sbjct: 199 YVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALPS-LTIVSFNTTIAGRTQNGDSE 257

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
            A+E F  MR   V  +  TF S ++ C+ ++A   G QVH  ++ +G +  V V ++L+
Sbjct: 258 GALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQVHAQVIKAGVDKVVPVITSLV 317

Query: 278 DMYAKCGDLDSARRLLE-YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
            MY++CG L  + R+ + Y  +D  +  ++MI      G   +A+ LFK+M     + ++
Sbjct: 318 HMYSRCGCLGDSERVYDGYCGLDLFL-LSAMISACGFHGQGHKAVELFKQMMNGGAEPNE 376

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKT-GFEGYKFVNNALIDMYAKQGNLDCA-FMVF 394
            T+ ++L   + +   +       L+ KT GF+      N ++D+  + G LD A  ++ 
Sbjct: 377 VTFLALLYACSHSGLKDEGLEFFELMTKTYGFQPSVKHYNCIVDLLGRSGCLDEAEALIL 436

Query: 395 NLMQDKDVISWTSLITGCAYHGSYEEA 421
           ++    D + W +L++ C    +++ A
Sbjct: 437 SMPVRADGVIWKTLLSACKTQKNFDMA 463



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 159/329 (48%), Gaps = 3/329 (0%)

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A  LF   P  +N   W  M+ G +  G    +++ F  MR EG+  ++F   S+   CA
Sbjct: 127 ARELFDKMPT-RNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVFRCCA 185

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            +     G QVH  ++ SG ++++ V ++L  MY +CG L     +L        VS+N+
Sbjct: 186 GLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSLTIVSFNT 245

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
            I G  + G  + AL  F  M   ++  D  T+ S ++C +    L   + VH+ ++K G
Sbjct: 246 TIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQVHAQVIKAG 305

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
            +    V  +L+ MY++ G L  +  V++     D+   +++I+ C +HG   +A++ F 
Sbjct: 306 VDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSAMISACGFHGQGHKAVELFK 365

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAKC 485
            M   G  P+ V   ++L AC+   + + G +   +  K+ G   S+   N +V +  + 
Sbjct: 366 QMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTKTYGFQPSVKHYNCIVDLLGRS 425

Query: 486 GCINDANRVFDSMHTR-DVITWTALIMGC 513
           GC+++A  +  SM  R D + W  L+  C
Sbjct: 426 GCLDEAEALILSMPVRADGVIWKTLLSAC 454



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 71/137 (51%), Gaps = 8/137 (5%)

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           D  + S I  AC  + +L   +Q+HA    SG  +     N+L+L YA  G +  A  +F
Sbjct: 44  DASLFSHIFRACRAIPLL---RQLHAFAATSGAAADRFTTNNLLLAYADLGDLPTARHLF 100

Query: 496 DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAE 555
           + +  R+V++W  LI GC +NG    A + +D+M  R    +  T+  ++   ++ GL E
Sbjct: 101 EGISKRNVMSWNILIGGCIKNGDLGSARELFDKMPTR----NVATWNAMVAGLTNVGLDE 156

Query: 556 NARWYFESMDKVYGIKP 572
           ++  +F +M +  G+ P
Sbjct: 157 DSLQFFLAMRR-EGMHP 172


>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
          Length = 766

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 242/652 (37%), Positives = 387/652 (59%), Gaps = 3/652 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +I  Y        A+++F+E P +N  +W+S+I  +   G   +A  LF  M   G  
Sbjct: 90  NHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTA 149

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
             Q+ L + +R C+  G +  G Q H +A+K+    +  V   LV MY+K   + +   L
Sbjct: 150 ADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFML 209

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE-SNQFTFPSILTACAAVS 249
           F+   D K+ ++W ++I G++Q G+  +A++ FR M VEG    N+F F S   AC AV 
Sbjct: 210 FERIKD-KDLISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVG 268

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
           + ++G Q+HG  +    + ++YV  +L DMYA+  +LDSAR      E  + VSWNS++ 
Sbjct: 269 SWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVN 328

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
            ++ +G   EAL LF +M    ++ D  T   +L        L + + +HS +VK G +G
Sbjct: 329 AYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDG 388

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
              V N+L+ MYA+  +L  A  VF+ ++D+DV++W S++T CA H   EE LK FS + 
Sbjct: 389 DVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLN 448

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
            S    D + ++++LSA AEL   E  +QVHA   K+G      + N+L+  YAKCG ++
Sbjct: 449 KSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLD 508

Query: 490 DANRVFDSM-HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
           DA R+F+ M + RDV +W++LI+G AQ G  KEAL  + +M + G +P+++TF+G+L AC
Sbjct: 509 DAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVTFIGVLTAC 568

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           S  G      +Y+  M+  YGI P  +H +C++DLL R+GKL EA   +DQM  EPD  +
Sbjct: 569 SRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIM 628

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           WK LL+A ++H D+E+G+RAA  +  ++P ++  YV L N+Y+ +G W + AR++K M++
Sbjct: 629 WKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRT 688

Query: 669 RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
            G++K PG SWV+   ++ +FI EDR HP   +IY+ ++ I + + +AGYVP
Sbjct: 689 SGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYAMLELIGMEMIKAGYVP 740



 Score =  218 bits (556), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 145/498 (29%), Positives = 240/498 (48%), Gaps = 39/498 (7%)

Query: 20  IGPARYTHNVGNSVKPASDL---NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAA 76
           +G  R  H      +  SDL   N  +  +S +G +D+   LFE++ D+D  +W ++IA 
Sbjct: 168 VGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA- 226

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYT 135
                                         G++  G ++EA ++F +M +EG + P+++ 
Sbjct: 227 ------------------------------GFAQQGFEMEALQVFRKMIVEGSHHPNEFH 256

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
             +  R C   G  + GEQ HG +IK   D + +V   L DMYA+ K +  A   F    
Sbjct: 257 FGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRI- 315

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGA 255
           +  + V+W +++  YS  G   +A+  F +MR  G+  +  T   +L AC    A   G 
Sbjct: 316 EAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGR 375

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
            +H  ++  G + +V V ++L+ MYA+C DL SA  +    +  + V+WNS++   A+  
Sbjct: 376 LIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHN 435

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
             +E L LF  ++  +  +D  +  +VL+  A        K VH+   K G    + ++N
Sbjct: 436 HPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSN 495

Query: 376 ALIDMYAKQGNLDCAFMVFNLM-QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
            LID YAK G+LD A  +F +M  ++DV SW+SLI G A  G  +EAL  FS MR  GI 
Sbjct: 496 TLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIR 555

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LVLVYAKCGCINDANR 493
           P+HV    +L+AC+ +  +  G   +++     G        S +V + A+ G + +A  
Sbjct: 556 PNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAAN 615

Query: 494 VFDSM-HTRDVITWTALI 510
             D M    D+I W  L+
Sbjct: 616 FIDQMPFEPDIIMWKTLL 633



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 203/430 (47%), Gaps = 20/430 (4%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSG-------FEANVYVQSALIDMYAKCGDLDSAR 290
           + ++++AC+ + +   G +VH  +++S           N  + + LI MY +C   DSAR
Sbjct: 47  YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
           ++ +     N VSW S+I    + G   +AL LF  M       D F   S +       
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           D+   + VH+  +K+       V NAL+ MY+K G +D  FM+F  ++DKD+ISW S+I 
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226

Query: 411 GCAYHGSYEEALKYFSDMRISGI-CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
           G A  G   EAL+ F  M + G   P+     S   AC  +   E+G+Q+H + +K    
Sbjct: 227 GFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 286

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
             L V  SL  +YA+   ++ A   F  +   D+++W +++   +  G   EAL  + +M
Sbjct: 287 RDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEM 346

Query: 530 LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA----CMIDLLG 585
              G +PD IT  GLL AC    +  +A  Y   +   Y +K G D        ++ +  
Sbjct: 347 RDSGLRPDGITVRGLLCAC----VGRDA-LYHGRLIHSYLVKLGLDGDVSVCNSLLSMYA 401

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ 645
           R   L  A  +  + + + D   W ++L+AC  H   E   +  + L + EP  ++  + 
Sbjct: 402 RCSDLSSAMDVFHE-IKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEP--SLDRIS 458

Query: 646 LSNMYSTAGK 655
           L+N+ S + +
Sbjct: 459 LNNVLSASAE 468



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 174/359 (48%), Gaps = 4/359 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           DRD +   ++   YA    L  A+  F      +  +W+S++  YS  GL  EA  LF +
Sbjct: 286 DRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSE 345

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+  G RP   T+  +L  C  +  L  G   H Y +K   D +  V   L+ MYA+C  
Sbjct: 346 MRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSD 405

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +  A  +F    D ++ V W +++T  +Q+ +  + ++ F  +       ++ +  ++L+
Sbjct: 406 LSSAMDVFHEIKD-QDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLS 464

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV- 302
           A A +   +   QVH     +G   +  + + LID YAKCG LD A RL E    + +V 
Sbjct: 465 ASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVF 524

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SW+S+IVG+A+ G+ KEAL LF +M +  I+ +  T+  VL   +    +N     +S++
Sbjct: 525 SWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIM 584

Query: 363 -VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYE 419
             + G    +   + ++D+ A+ G L  A    + M  + D+I W +L+     H   E
Sbjct: 585 EPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDME 643


>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840 [Vitis vinifera]
          Length = 713

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 243/675 (36%), Positives = 388/675 (57%), Gaps = 8/675 (1%)

Query: 53  DEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYG 112
           D   Q    +S  D    N  +     +G L  A+++F++   K+  +W++LI GY N  
Sbjct: 35  DNLSQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNAN 94

Query: 113 LDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV 171
              EA  LF  M++E G R   + L    + C L   +  GE  HGYA+KT    + FV 
Sbjct: 95  DSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVG 154

Query: 172 TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV 231
           + L+DMY K   IFE   +F   P  +N V+WT +ITG  + GY  +A+  F +M    V
Sbjct: 155 SALLDMYTKNGKIFEGRRVFHEMP-MRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRV 213

Query: 232 ESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR 291
           E + +TF   L ACA   A ++G ++H   +  GF+ + +V + L  MY KCG L+    
Sbjct: 214 EYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLT 273

Query: 292 LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID 351
           L E   + + VSW ++I    + G  + A+  F +M   D+  +++T+ +V++  A+   
Sbjct: 274 LFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLAR 333

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
           +   + +H+LI+  G      V N+++ MYAK G L  + ++F+ M  +D++SW+++I G
Sbjct: 334 IEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAG 393

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
            +  G   EA +  S MR+ G  P    ++S+LSAC  + +LE G+Q+HA  L  G   +
Sbjct: 394 YSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHT 453

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
             V ++L+ +Y KCG I +A+R+FD+    D+++WTA+I G A++G  +E +  ++++  
Sbjct: 454 AMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPR 513

Query: 532 RGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLI 591
            G +PD +TF+G+L ACSHAGL +    YF +M K Y I P  +HY CMIDLL R+G+L 
Sbjct: 514 VGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLS 573

Query: 592 EAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYS 651
           +A+ +++ M    D  VW  LL ACRVHGD+E G R A  + +LEP  A  ++ L+N+Y+
Sbjct: 574 DAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYA 633

Query: 652 TAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKID---- 707
           + GKW +AA +RKLMKS+G+ KEPG SW++    V  F++ DR HP   DIY+ +D    
Sbjct: 634 SKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLAS 693

Query: 708 --EIMLLIKEAGYVP 720
             E+   ++E G++P
Sbjct: 694 RTELADCVQETGFLP 708


>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
          Length = 734

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 252/694 (36%), Positives = 384/694 (55%), Gaps = 29/694 (4%)

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA +   +M       + ++   +   C     L  G   H    +T  + +  +   L+
Sbjct: 70  EAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLL 129

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
            MY  C    + + +F      KN V+W  +I+ Y++NG   KAI  F DM+  G+  N 
Sbjct: 130 RMYCDCGSXIDVQKVFDEML-MKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNS 188

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
             + S+L +C   S  + G Q+H  ++ +   AN+ V++A+ +MY +CG L+ A+ + + 
Sbjct: 189 AVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDG 248

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
            +  N V+W  ++VG+ +    + AL LF +M    +++D+F +  VL       D +  
Sbjct: 249 MDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMG 308

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           K +HS IVK G E    V   L+D Y K G+++ A+  F  + + + +SW++LI+G +  
Sbjct: 309 KQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQS 368

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G  E+ +K F+ +R  G+  +  + +S+  ACA    L  G Q H   +K G  S L  +
Sbjct: 369 GRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGE 428

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           +++V +Y+KCG ++ A R F+S+   D + WTA+I G A +G   EAL F+ +M + G +
Sbjct: 429 SAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVR 488

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           P+ +TF+ +L ACSH+GL   A+ Y  SM + YG+KP  DHY CMID   R+G L EA  
Sbjct: 489 PNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALE 548

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
           L+++M  EPDA  WK+LL  C  H DL+LG+ AA NLF L+P +   Y+ L N+YS  GK
Sbjct: 549 LINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGK 608

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
           WE+A  VRKLM  R ++KE  CSW+    QVH         P+R           LL +E
Sbjct: 609 WEEAGHVRKLMAERELKKEVSCSWISVKGQVH--------RPVR-----------LLNEE 649

Query: 716 AGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
                D++ +L   +E+     L  HSEKLA+AFGL++    API +FKNLR C DCH  
Sbjct: 650 ----DDVSCSLPARKEQ-----LLDHSEKLAIAFGLISTEDNAPILVFKNLRACRDCHEF 700

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            K +S V  R I++RDS RFHHFK+G CSC DYW
Sbjct: 701 GKQVSMVTGRQIVVRDSTRFHHFKSGKCSCNDYW 734



 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 137/460 (29%), Positives = 241/460 (52%), Gaps = 5/460 (1%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
           +L   + +  G   N ++  Y + G   + +K+F+E   KN  +W  +I  Y+  G   +
Sbjct: 112 RLRRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEK 171

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
           A  LF  MQ  G RP+     ++L+ C     L+ G+Q H + I+   + N  V T + +
Sbjct: 172 AIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICN 231

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           MY +C  +  A+ +F    D +N V WT ++ GY+Q      A+E F  M +EGVE ++F
Sbjct: 232 MYVRCGWLEGAKLVFDGM-DAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEF 290

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
            F  +L  C  +   D G Q+H  I+  G E+ V V + L+D Y KCGD++SA R     
Sbjct: 291 VFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRI 350

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              N+VSW+++I GF++ G  ++ + +F  + +  + ++ F Y SV    A+  +LN   
Sbjct: 351 SEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGS 410

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
             H   +K G   Y +  +A++ MY+K G LD A   F  + + D ++WT++I+G AYHG
Sbjct: 411 QAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHG 470

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD- 475
           +  EAL +F  M+  G+ P+ V   ++L+AC+   ++   +Q      +  G    ++D 
Sbjct: 471 NAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKP-TIDH 529

Query: 476 -NSLVLVYAKCGCINDANRVFDSM-HTRDVITWTALIMGC 513
            + ++  Y++ G + +A  + + M    D ++W +L+ GC
Sbjct: 530 YDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLGGC 569



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 156/319 (48%), Gaps = 2/319 (0%)

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N  +V  ++QG  KEA    K+M   D+ +   +Y  +         L + + +H  + +
Sbjct: 56  NLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRR 115

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
           T       + N L+ MY   G+      VF+ M  K+++SW  +I+  A +G  E+A++ 
Sbjct: 116 TVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRL 175

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           FSDM+ SGI P+  V  S+L +C   + LE G+Q+H+  +++   ++++V+ ++  +Y +
Sbjct: 176 FSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVR 235

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG +  A  VFD M  ++ +TWT L++G  Q  K + AL+ + +M   G + D   F  +
Sbjct: 236 CGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIV 295

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L  C      +  +     + K+ G +        ++D   + G +  A     + + EP
Sbjct: 296 LKVCCXLEDWDMGKQIHSHIVKL-GXESEVSVGTPLVDFYVKCGDIESAYRSFGR-ISEP 353

Query: 605 DATVWKALLSACRVHGDLE 623
           +   W AL+S     G LE
Sbjct: 354 NDVSWSALISGFSQSGRLE 372



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 66/169 (39%), Gaps = 40/169 (23%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +S  G +D A + FE + + D   W  +I+                              
Sbjct: 435 YSKCGRLDYARRAFESIDEPDAVAWTAIIS------------------------------ 464

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG-----YAI 160
            GY+ +G   EA   F +MQ  G RP+  T   VL  CS  GL+   +Q+ G     Y +
Sbjct: 465 -GYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGV 523

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
           K   D        ++D Y++   + EA  L    P   + ++W +++ G
Sbjct: 524 KPTIDH----YDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLGG 568


>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Vitis vinifera]
          Length = 678

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 247/637 (38%), Positives = 368/637 (57%), Gaps = 4/637 (0%)

Query: 174 LVDMYAKCKCIFEAEYLFKMFPD-GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
           L+  YA+   I  A  +F   P  G +  AW  MI  YS+ G  F+A+  +  M  EGV 
Sbjct: 45  LIQSYARLGHIESARQVFDKSPQCGVD--AWNAMIIAYSRRGAMFEALSLYHRMASEGVR 102

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
            +  T+  +L AC        G +     +  G+  +V+V +A++++YAKCG +D A R+
Sbjct: 103 PDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRV 162

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
            +     + V W +MI G A+ G  +EA+ ++++MH + ++ D      ++    +    
Sbjct: 163 FDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHS 222

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
               S+H  +++        V  +L+DMYAK G+L+ A  VF  M  K+VISW++LI+G 
Sbjct: 223 KMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGF 282

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
           A +G    AL+   DM+  G  PD V + S+L AC+++  L+ G+ VH   ++      +
Sbjct: 283 AQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRRLHFDCV 342

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
           S   +++ +Y+KCG ++ A  VFD +  RD I+W A+I     +G G+EAL  + QM   
Sbjct: 343 S-STAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRET 401

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIE 592
             KPD+ TF  LL A SH+GL E  R++F  M   Y I+P   HYACM+DLL R+G++ E
Sbjct: 402 NVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEE 461

Query: 593 AKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYST 652
           A+ L++ M+ EP   +W ALLS C  HG   +GE AA  + EL P +   Y  +SN ++T
Sbjct: 462 AQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLELNPDDPGIYSLVSNFFAT 521

Query: 653 AGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLL 712
           A +W++ A VRK+MK  G++K PG S +E N ++H F+ ED+ H    +I   + ++   
Sbjct: 522 ARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHAFLMEDKSHHQYEEIMQVLGKLDYE 581

Query: 713 IKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDC 772
           +K  GYVP   F LHN+EEE KE  L  HSE+LA+AFGLL    G  + I KNLRVCGDC
Sbjct: 582 MKAMGYVPKTEFVLHNLEEEVKERMLCNHSERLAIAFGLLNTGPGTRLLITKNLRVCGDC 641

Query: 773 HTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           H A K+IS +  R I++RD  RFHHFK G CSCGDYW
Sbjct: 642 HEATKFISKIVNREIVVRDVKRFHHFKDGVCSCGDYW 678



 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 145/449 (32%), Positives = 234/449 (52%), Gaps = 6/449 (1%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +I +YA  G +  A+++F+++P      W+++I  YS  G   EA  L+ +M  EG RP 
Sbjct: 45  LIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPD 104

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
             T   VL+ C+    L+ GE+    A+   +  + FV   ++++YAKC  + EA  +F 
Sbjct: 105 SSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFD 164

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
                ++ V WTTMITG +QNG   +A++ +R M  + VE +      ++ AC  +    
Sbjct: 165 KMGR-RDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSK 223

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G  +HG ++      +V VQ++L+DMYAK G L+ A  +       N +SW+++I GFA
Sbjct: 224 MGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFA 283

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT-GFEGYK 371
           + GF   AL L   M +   K D  +  SVL   +    L   KSVH  IV+   F+   
Sbjct: 284 QNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRRLHFDCVS 343

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
             + A+IDMY+K G+L  A  VF+ +  +D ISW ++I     HGS EEAL  F  MR +
Sbjct: 344 --STAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRET 401

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LVLVYAKCGCIND 490
            + PDH   +S+LSA +   ++E G+   ++ +            + +V + ++ G + +
Sbjct: 402 NVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEE 461

Query: 491 ANRVFDSMHTRDVIT-WTALIMGCAQNGK 518
           A  + +SM T   I  W AL+ GC  +GK
Sbjct: 462 AQELIESMITEPGIAIWVALLSGCLNHGK 490



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/412 (30%), Positives = 212/412 (51%), Gaps = 20/412 (4%)

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
           A++H  ++ +G   +    + LI  YA+ G ++SAR++ + S      +WN+MI+ ++R+
Sbjct: 24  AKIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRR 83

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
           G   EALSL+ +M +  ++ D  TY  VL     ++DL + +      V  G+    FV 
Sbjct: 84  GAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVG 143

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
            A++++YAK G +D A  VF+ M  +D++ WT++ITG A +G   EA+  +  M    + 
Sbjct: 144 AAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVE 203

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
            D VV+  ++ AC  L   + G  +H   ++      + V  SLV +YAK G +  A+ V
Sbjct: 204 GDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCV 263

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
           F  M  ++VI+W+ALI G AQNG    ALQ    M + G KPD ++ V +L ACS  G  
Sbjct: 264 FRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFL 323

Query: 555 ENARWYFESMDKVYGIKPGPDHYAC-----MIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
           +  +        V+G      H+ C     +ID+  + G L  A+ + DQ +   D+  W
Sbjct: 324 KLGK-------SVHGYIVRRLHFDCVSSTAVIDMYSKCGSLSFARTVFDQ-ISFRDSISW 375

Query: 610 KALLSACRVHGDLELGERAANNLFELEPMNAMP----YVQLSNMYSTAGKWE 657
            A++++  +HG    GE A +   ++   N  P    +  L + +S +G  E
Sbjct: 376 NAIIASYGIHGS---GEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVE 424



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 188/359 (52%), Gaps = 12/359 (3%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F    ++  YA  G++ EA ++F++   ++   W+++I G +  G   EA +++ QM 
Sbjct: 139 DVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMH 198

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            +        +  +++ C+  G  + G   HGY I+    ++  V T LVDMYAK   + 
Sbjct: 199 KKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLE 258

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A  +F+     KN ++W+ +I+G++QNG+   A++   DM+  G + +  +  S+L AC
Sbjct: 259 LASCVFRRMLY-KNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLAC 317

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           + V     G  VHG I+      +    +A+IDMY+KCG L  AR + +     + +SWN
Sbjct: 318 SQVGFLKLGKSVHGYIVRR-LHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWN 376

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           ++I  +   G  +EALSLF +M   ++K D  T+ S+L+ F+ +  +   +   S++V  
Sbjct: 377 AIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNE 436

Query: 366 GFEGYKFVNN-----ALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSY 418
               YK   +      ++D+ ++ G ++ A  ++ +++ +  +  W +L++GC  HG +
Sbjct: 437 ----YKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKF 491



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 106/463 (22%), Positives = 203/463 (43%), Gaps = 47/463 (10%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G +  K    D     +++  YA +G L  A  +F    +KN  +WS+LI G++  G   
Sbjct: 230 GYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAG 289

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
            A +L   MQ  GY+P   +L +VL  CS  G L+ G+  HGY ++     +    T ++
Sbjct: 290 NALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRR-LHFDCVSSTAVI 348

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMY+KC  +  A  +F      ++ ++W  +I  Y  +G G +A+  F  MR   V+ + 
Sbjct: 349 DMYSKCGSLSFARTVFDQI-SFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDH 407

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLE 294
            TF S+L+A +     + G      +++    + +    + ++D+ ++ G ++ A+ L+E
Sbjct: 408 ATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIE 467

Query: 295 YSEIDNEVS-WNSMIVGFARQGFHKEALSLFKKMHARDI----KIDDFTYPSVLNCFASN 349
               +  ++ W +++ G    G       L  +M A+ +      D   Y  V N FA+ 
Sbjct: 468 SMITEPGIAIWVALLSGCLNHGKF-----LIGEMAAKKVLELNPDDPGIYSLVSNFFATA 522

Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
              +    V  ++ KTG +  K    +++++  K      AF    LM+DK         
Sbjct: 523 RRWDEVAEVRKIMKKTGMK--KVPGYSVMEVNGKLH----AF----LMEDKS-------- 564

Query: 410 TGCAYHGSYEEALKYFS----DMRISGICPD-HVVVSSILSACAELTVLEFGQQVHAVF- 463
                H  YEE ++       +M+  G  P    V+ ++     E  +    +++   F 
Sbjct: 565 -----HHQYEEIMQVLGKLDYEMKAMGYVPKTEFVLHNLEEEVKERMLCNHSERLAIAFG 619

Query: 464 -LKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
            L +G  + L +  +L +    CG  ++A +    +  R+++ 
Sbjct: 620 LLNTGPGTRLLITKNLRV----CGDCHEATKFISKIVNREIVV 658



 Score = 46.6 bits (109), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 65/121 (53%), Gaps = 8/121 (6%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF---NETPFK- 96
           A++D +S  G +  A  +F+++S RD  +WN +IA+Y   G   EA  LF    ET  K 
Sbjct: 346 AVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKP 405

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR--PSQYTLDNVLRLCSLKGLLQRGEQ 154
           +  T++SL+  +S+ GL +E    ++ + +  Y+  PS+     ++ L S  G ++  ++
Sbjct: 406 DHATFASLLSAFSHSGL-VEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQE 464

Query: 155 F 155
            
Sbjct: 465 L 465


>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 684

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 250/664 (37%), Positives = 386/664 (58%), Gaps = 4/664 (0%)

Query: 149 LQRGEQFHGYAIKTC-FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
           ++ G   H   +KT       F+   L++MY+K      A  + ++ P  +N V+WT+++
Sbjct: 22  MRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTP-ARNVVSWTSLV 80

Query: 208 TGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFE 267
           +G +QNG+   A+  F +MR EGV  N FTFP +  A A++     G Q+H   +  G  
Sbjct: 81  SGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRI 140

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM 327
            +V+V  +  DMY K    D AR+L +     N  +WN+ I      G  KEA+  F + 
Sbjct: 141 LDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEF 200

Query: 328 HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL 387
                + +  T+   LN  +  + L+    +H L+ ++GF+    V N LID Y K   +
Sbjct: 201 RRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQI 260

Query: 388 DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSAC 447
             + ++F  M  K+ +SW SL+     +   E+A   +   R   +     ++SS+LSAC
Sbjct: 261 RSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSAC 320

Query: 448 AELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWT 507
           A +  LE G+ +HA  +K+    ++ V ++LV +Y KCGCI D+ + FD M  ++++T  
Sbjct: 321 AGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLN 380

Query: 508 ALIMGCAQNGKGKEALQFYDQMLARG--TKPDYITFVGLLFACSHAGLAENARWYFESMD 565
           +LI G A  G+   AL  ++ M  RG    P+Y+TFV LL ACS AG  EN    F+SM 
Sbjct: 381 SLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMK 440

Query: 566 KVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELG 625
             YGI+PG +HY+C++D+LGR+G + +A   + +M  +P  +VW AL +ACR+HG   LG
Sbjct: 441 STYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHLG 500

Query: 626 ERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQ 685
             AA NLF+L+P ++  +V LSN ++ AG+W +A  VR+ MK  GI+K  G SW+   +Q
Sbjct: 501 ILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWITVKNQ 560

Query: 686 VHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKL 745
           VH F ++DR H +  +I + + ++   ++ AGY PD+  +L+++EEE K   +++HSEKL
Sbjct: 561 VHAFQAKDRSHKMNKEIQTMLTKLRNKMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKL 620

Query: 746 AVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSC 805
           A+AFGL+ LP   PIRI KNLR+CGDCH+  K++S    R II+RD+NRFH FK G CSC
Sbjct: 621 ALAFGLVALPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSC 680

Query: 806 GDYW 809
            DYW
Sbjct: 681 KDYW 684



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 135/455 (29%), Positives = 218/455 (47%), Gaps = 5/455 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N +I  Y+       A+ +   TP +N  +W+SL+ G +  G    A   F++M+ E
Sbjct: 43  FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRRE 102

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G  P+ +T   V +  +   L   G+Q H  A+K    L+ FV     DMY K +   +A
Sbjct: 103 GVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDA 162

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             LF   P+ +N   W   I+    +G   +AIE F + R  G + N  TF   L AC+ 
Sbjct: 163 RKLFDEIPE-RNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSD 221

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
               D G Q+HG +  SGF+ +V V + LID Y KC  + S+  +     + N VSW S+
Sbjct: 222 GLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSL 281

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           +  + +    ++A  L+ +     ++  DF   SVL+  A    L   +S+H+  VK   
Sbjct: 282 VAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACV 341

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
           E   FV +AL+DMY K G ++ +   F+ M +K++++  SLI G A+ G  + AL  F D
Sbjct: 342 ERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFED 401

Query: 428 M--RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL-VYAK 484
           M  R  G  P+++   S+LSAC+    +E G ++      + G    +   S ++ +  +
Sbjct: 402 MAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGR 461

Query: 485 CGCINDANRVFDSMHTRDVIT-WTALIMGCAQNGK 518
            G +  A      M  +  I+ W AL   C  +GK
Sbjct: 462 AGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGK 496



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 134/419 (31%), Positives = 206/419 (49%), Gaps = 24/419 (5%)

Query: 82  RLRE-AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVL 140
           RLR+ A+KLF+E P +N  TW++ I      G   EA E F + +  G +P+  T    L
Sbjct: 157 RLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFL 216

Query: 141 RLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNH 200
             CS   LL  G Q HG   ++ FD +  V  GL+D Y KCK I  +E +F      KN 
Sbjct: 217 NACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEM-GMKNA 275

Query: 201 VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
           V+W +++  Y QN    KA   +   R E VE++ F   S+L+ACA ++  + G  +H  
Sbjct: 276 VSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAH 335

Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEA 320
            + +  E N++V SAL+DMY KCG ++ + +  +     N V+ NS+I G+A QG    A
Sbjct: 336 AVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMA 395

Query: 321 LSLFKKMHARDI--KIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
           L+LF+ M  R      +  T+ S+L+ C  +    N  K   S+    G E      + +
Sbjct: 396 LALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCI 455

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHG-------SYEEALKYFSDMR 429
           +DM  + G ++ AF     M  K  IS W +L   C  HG       + E   K   D +
Sbjct: 456 VDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHLGILAAENLFKL--DPK 513

Query: 430 ISGICPDHVVVSSILSAC---AELTVLEFGQQVHAVFLKSG-GCSSLSVDNSLVLVYAK 484
            SG   +HV++S+  +A    AE   +   +++  V +K G G S ++V N +    AK
Sbjct: 514 DSG---NHVLLSNTFAAAGRWAEANTVR--EEMKGVGIKKGAGYSWITVKNQVHAFQAK 567



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 126/256 (49%), Gaps = 5/256 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G +F    D D   +N +I  Y    ++R ++ +F E   KN  +W SL+  Y     D 
Sbjct: 233 GLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDE 292

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           +A  L+ + + E    S + + +VL  C+    L+ G   H +A+K C + N FV + LV
Sbjct: 293 KASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALV 352

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM--RVEGVES 233
           DMY KC CI ++E  F   P+ KN V   ++I GY+  G    A+  F DM  R  G   
Sbjct: 353 DMYGKCGCIEDSEQAFDEMPE-KNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAP 411

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRL 292
           N  TF S+L+AC+   A + G ++   + S+ G E      S ++DM  + G ++ A   
Sbjct: 412 NYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEF 471

Query: 293 LEYSEIDNEVS-WNSM 307
           ++   I   +S W ++
Sbjct: 472 IKKMPIKPTISVWGAL 487


>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
 gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
          Length = 581

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 237/584 (40%), Positives = 362/584 (61%), Gaps = 11/584 (1%)

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
           G++ + FTFP I+ AC+ +   +FG ++H  ++  G+++ V++ ++LI MY KC   + +
Sbjct: 5   GIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELS 64

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPS---VLNCF 346
           R++ +     N VSW+++I    +    KE  SLF++M      + + + PS   +LN  
Sbjct: 65  RQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQM------LSEGSRPSRGAILNAM 118

Query: 347 ASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWT 406
           A       A  V+ ++V+ G +  + V +A   M+A+ G ++ A  +F+ +  KD+++W 
Sbjct: 119 ACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWA 178

Query: 407 SLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
           + I          EAL     M + GI PD + +  ++ AC+ L   +    VH +    
Sbjct: 179 TTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITTG 238

Query: 467 GGCSSL-SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
              + L +V+ +L+ +Y KCG +  A +VFD M  R++ITW+A+I G   +G G+EAL  
Sbjct: 239 FFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNL 298

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
           +DQM A   KPD+ITFV +L ACSH+GL       F SM + +G+ P P+HYACM+D+LG
Sbjct: 299 FDQMKA-SVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILG 357

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ 645
           R+GKL EA   +++M   P+A VW ALL ACR+H +++L E  A  LF+L+P NA  YV 
Sbjct: 358 RAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGRYVI 417

Query: 646 LSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSK 705
           L N+Y+  GK ++A  +R LMK+RG++K  G S +E  ++++ F++ DR HP    IYS+
Sbjct: 418 LYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDLIYSE 477

Query: 706 IDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKN 765
           ++ +M  I++ GY PD+NF LH+V+EE KE  L  HSEKLA+ FGLL L  G+ IRI KN
Sbjct: 478 LERLMDRIRQEGYTPDINFVLHDVDEETKESMLYLHSEKLAIVFGLLNLGPGSVIRIRKN 537

Query: 766 LRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           LRVCGDCHTA K+IS V  R I++RD++RFHHFK G CSC DYW
Sbjct: 538 LRVCGDCHTATKFISKVTGREIVVRDAHRFHHFKNGACSCRDYW 581



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 190/390 (48%), Gaps = 10/390 (2%)

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G +P  +T   +++ CS     + G + H   +K  +    F+   L+ MY KC     +
Sbjct: 5   GIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELS 64

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F   PD KN V+W+ +I    Q+    +    FR M  EG   ++    +IL A A 
Sbjct: 65  RQVFDEMPD-KNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSR---GAILNAMAC 120

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           V + +    V+  ++ +G + +  VQSA   M+A+CG ++ AR+L +     + V+W + 
Sbjct: 121 VRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATT 180

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I  + +     EAL L K+M  + I  D  T   V+   ++      A  VH  I+ TGF
Sbjct: 181 IEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHG-IITTGF 239

Query: 368 EGYKF--VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
              +   V  ALID+Y K G+L  A  VF+ MQ++++I+W+++I+G   HG   EAL  F
Sbjct: 240 FYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLF 299

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LVLVYAK 484
             M+ S + PDH+   SILSAC+   ++  G +      +  G +      + +V +  +
Sbjct: 300 DQMKAS-VKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGR 358

Query: 485 CGCINDANRVFDSMHTR-DVITWTALIMGC 513
            G +++A    + M  R +   W AL+  C
Sbjct: 359 AGKLDEACDFIERMPVRPNAAVWGALLGAC 388



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 173/356 (48%), Gaps = 18/356 (5%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N++I  Y    +   ++++F+E P KN  +WS++I          E F LF QM  E
Sbjct: 46  FISNSLITMYGKCDKYELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSE 105

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G RPS+  + N +         +  +  +   ++   D +  V +    M+A+C  +  A
Sbjct: 106 GSRPSRGAILNAMACVRSH---EEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVA 162

Query: 188 EYLFKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
             LF    DG   K+ V W T I  Y +     +A+   + M ++G+  +  T   ++ A
Sbjct: 163 RKLF----DGIMSKDLVTWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRA 218

Query: 245 CAAVSARDFGAQVHGCILSSGFEAN--VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           C+ +++      VHG I+++GF  N  + V++ALID+Y KCG L  AR++ +  +  N +
Sbjct: 219 CSTLASFQLAHIVHG-IITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNII 277

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSL 361
           +W++MI G+   G+ +EAL+LF +M A  +K D  T+ S+L+ C  S +     +  +S+
Sbjct: 278 TWSAMISGYGMHGWGREALNLFDQMKA-SVKPDHITFVSILSACSHSGLVAEGWECFNSM 336

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLD--CAFMVFNLMQDKDVISWTSLITGCAYH 415
               G          ++D+  + G LD  C F +  +    +   W +L+  C  H
Sbjct: 337 ARDFGVTPRPEHYACMVDILGRAGKLDEACDF-IERMPVRPNAAVWGALLGACRIH 391



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 118/252 (46%), Gaps = 13/252 (5%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D    +     +A  GR+  A+KLF+    K+  TW++ I  Y    + +EA  L  Q
Sbjct: 140 DFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTIEAYVKADMPLEALGLLKQ 199

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAF--VVTGLVDMYAKC 181
           M L+G  P   TL  V+R CS     Q     HG  I T F  N    V T L+D+Y KC
Sbjct: 200 MMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGI-ITTGFFYNQLLAVETALIDLYVKC 258

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
             +  A  +F    + +N + W+ MI+GY  +G+G +A+  F  M+   V+ +  TF SI
Sbjct: 259 GSLTYARKVFDGMQE-RNIITWSAMISGYGMHGWGREALNLFDQMKAS-VKPDHITFVSI 316

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQ----SALIDMYAKCGDLDSARRLLEYSE 297
           L+AC   S     A+   C  S   +  V  +    + ++D+  + G LD A   +E   
Sbjct: 317 LSAC---SHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGRAGKLDEACDFIERMP 373

Query: 298 I-DNEVSWNSMI 308
           +  N   W +++
Sbjct: 374 VRPNAAVWGALL 385



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 7/100 (7%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK---N 97
           AL+D +   G +  A ++F+ M +R+  TW+ MI+ Y   G  REA  LF++       +
Sbjct: 250 ALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLFDQMKASVKPD 309

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLE---GYRPSQY 134
             T+ S++   S+ GL  E +E F  M  +     RP  Y
Sbjct: 310 HITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHY 349


>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g15510, chloroplastic; Flags: Precursor
 gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
 gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
 gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 254/738 (34%), Positives = 414/738 (56%), Gaps = 5/738 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM-QLEGY 129
           N  +A +   G L +A  +F +   +N F+W+ L+ GY+  G   EA  L+ +M  + G 
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           +P  YT   VLR C     L RG++ H + ++  ++L+  VV  L+ MY KC  +  A  
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           LF   P  ++ ++W  MI+GY +NG   + +E F  MR   V+ +  T  S+++AC  + 
Sbjct: 253 LFDRMPR-RDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
            R  G  +H  ++++GF  ++ V ++L  MY   G    A +L    E  + VSW +MI 
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMIS 371

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           G+       +A+  ++ M    +K D+ T  +VL+  A+  DL+    +H L +K     
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
           Y  V N LI+MY+K   +D A  +F+ +  K+VISWTS+I G   +    EAL +   M+
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK 491

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
           ++ + P+ + +++ L+ACA +  L  G+++HA  L++G      + N+L+ +Y +CG +N
Sbjct: 492 MT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMN 550

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
            A   F+S   +DV +W  L+ G ++ G+G   ++ +D+M+    +PD ITF+ LL  CS
Sbjct: 551 TAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCS 609

Query: 550 HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
            + +      YF  M+  YG+ P   HYAC++DLLGR+G+L EA   + +M   PD  VW
Sbjct: 610 KSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVW 668

Query: 610 KALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
            ALL+ACR+H  ++LGE +A ++FEL+  +   Y+ L N+Y+  GKW + A+VR++MK  
Sbjct: 669 GALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKEN 728

Query: 670 GIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNV 729
           G+  + GCSWVE   +VH F+S+D+ HP   +I + ++     + E G       +  + 
Sbjct: 729 GLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDE 788

Query: 730 EEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIIL 789
            E  ++     HSE+ A+AFGL+    G PI + KNL +C +CH  +K+IS    R I +
Sbjct: 789 TEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISV 848

Query: 790 RDSNRFHHFKAGNCSCGD 807
           RD+  FHHFK G CSCGD
Sbjct: 849 RDAEHFHHFKDGECSCGD 866



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/427 (30%), Positives = 224/427 (52%), Gaps = 4/427 (0%)

Query: 105 IYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCF 164
           ++G    G   EA +L   MQ       +     ++RLC  K   + G + +  A+ +  
Sbjct: 66  LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF- 223
            L   +    + M+ +   + +A Y+F    + +N  +W  ++ GY++ GY F    C  
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSE-RNLFSWNVLVGGYAKQGY-FDEAMCLY 183

Query: 224 -RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK 282
            R + V GV+ + +TFP +L  C  +     G +VH  ++  G+E ++ V +ALI MY K
Sbjct: 184 HRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVK 243

Query: 283 CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
           CGD+ SAR L +     + +SWN+MI G+   G   E L LF  M    +  D  T  SV
Sbjct: 244 CGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSV 303

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV 402
           ++      D    + +H+ ++ TGF     V N+L  MY   G+   A  +F+ M+ KD+
Sbjct: 304 ISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDI 363

Query: 403 ISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAV 462
           +SWT++I+G  Y+   ++A+  +  M    + PD + V+++LSACA L  L+ G ++H +
Sbjct: 364 VSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKL 423

Query: 463 FLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEA 522
            +K+   S + V N+L+ +Y+KC CI+ A  +F ++  ++VI+WT++I G   N +  EA
Sbjct: 424 AIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEA 483

Query: 523 LQFYDQM 529
           L F  QM
Sbjct: 484 LIFLRQM 490



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 142/495 (28%), Positives = 226/495 (45%), Gaps = 36/495 (7%)

Query: 21  GPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           G   + H V    +   D+  AL+  +   G++  A  LF++M  RD  +WN MI+ Y  
Sbjct: 215 GKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGY-- 272

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
                          F+N              G+  E  ELF+ M+     P   TL +V
Sbjct: 273 ---------------FEN--------------GMCHEGLELFFAMRGLSVDPDLMTLTSV 303

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKN 199
           +  C L G  + G   H Y I T F ++  V   L  MY       EAE LF    + K+
Sbjct: 304 ISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM-ERKD 362

Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG 259
            V+WTTMI+GY  N    KAI+ +R M  + V+ ++ T  ++L+ACA +   D G ++H 
Sbjct: 363 IVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHK 422

Query: 260 CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKE 319
             + +   + V V + LI+MY+KC  +D A  +       N +SW S+I G        E
Sbjct: 423 LAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFE 482

Query: 320 ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALID 379
           AL   ++M    ++ +  T  + L   A    L   K +H+ +++TG     F+ NAL+D
Sbjct: 483 ALIFLRQMKM-TLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLD 541

Query: 380 MYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVV 439
           MY + G ++ A+  FN  Q KDV SW  L+TG +  G     ++ F  M  S + PD + 
Sbjct: 542 MYVRCGRMNTAWSQFN-SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEIT 600

Query: 440 VSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH 499
             S+L  C++  ++  G    +     G   +L     +V +  + G + +A++    M 
Sbjct: 601 FISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMP 660

Query: 500 -TRDVITWTALIMGC 513
            T D   W AL+  C
Sbjct: 661 VTPDPAVWGALLNAC 675


>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
 gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
          Length = 869

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 270/738 (36%), Positives = 399/738 (54%), Gaps = 6/738 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N M++     G    A ++F + P ++ F+W+ ++ GY   GL  EA +L+ +M   G R
Sbjct: 133 NAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVR 192

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  YT   VLR C      + G + H + ++  F     V+  L+ MYAKC  +  A  +
Sbjct: 193 PDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKV 252

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F       + ++W  MI G+ +NG     +E F  M  + V+ N  T  S+  A   +S 
Sbjct: 253 FDSMAV-MDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSD 311

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
             F  ++HG  +  GF  +V   ++LI MYA  G +  AR +    +  + +SW +MI G
Sbjct: 312 ITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISG 371

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           + + GF  +AL ++  M   ++  DD T  S L   A    L+    +H L    GF  Y
Sbjct: 372 YEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSY 431

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
             V NAL++MYAK   +D A  VF  M +KDV+SW+S+I G  ++    EAL YF  M +
Sbjct: 432 VVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHM-L 490

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
           + + P+ V   + L+ACA    L  G+++HA  L+ G      + N+L+ +Y KCG    
Sbjct: 491 ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGY 550

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           A   F +   +DV++W  +I G   +G G+ AL F++QM+  G  PD +TFV LL ACS 
Sbjct: 551 AWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSR 610

Query: 551 AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
            G+       F SM   Y I P   HYACM+DLL R G+L EA   +++M   PDA VW 
Sbjct: 611 GGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWG 670

Query: 611 ALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRG 670
           ALL+ CR+H  +ELGE AA  + ELEP +A  +V L ++Y+ AG W+  ARVRK M+ +G
Sbjct: 671 ALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLARVRKTMREKG 730

Query: 671 IRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVE 730
           +  + GCSWVE    VH F+++D  HP   +I + ++ I   +K +G  P      H+ E
Sbjct: 731 LDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGCAP---VESHSPE 787

Query: 731 EEG-KEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIIL 789
           ++  K+     HSE+LAVAFGL+    G  I + KN   C  CH  +K IS +  R II+
Sbjct: 788 DKVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMISYIVRRDIIV 847

Query: 790 RDSNRFHHFKAGNCSCGD 807
           RDS + HHFK G+CSCGD
Sbjct: 848 RDSKQVHHFKDGSCSCGD 865



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 120/250 (48%), Gaps = 6/250 (2%)

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           + NA++ M  + G    A+ VF  M ++DV SW  ++ G    G  EEAL  +  M  +G
Sbjct: 131 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAG 190

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
           + PD      +L +C  +     G++VHA  L+ G    + V N+L+ +YAKCG +  A 
Sbjct: 191 VRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAAR 250

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
           +VFDSM   D I+W A+I G  +NG+    L+ +  ML    +P+ +T   +  A   +G
Sbjct: 251 KVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVA---SG 307

Query: 553 LAENARWYFESMDKVYGIKPGPDHYAC--MIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
           L  +  +  E            D   C  +I +    G + +A+ +  +M    DA  W 
Sbjct: 308 LLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRM-DTRDAMSWT 366

Query: 611 ALLSACRVHG 620
           A++S    +G
Sbjct: 367 AMISGYEKNG 376



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 88/214 (41%), Gaps = 14/214 (6%)

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
           HG   +AL        S   PD     ++   C     +E G +  A          L +
Sbjct: 75  HGQLAQALWLLES---SAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRL 131

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
            N+++ +  + G    A RVF  M  RDV +W  ++ G  + G  +EAL  Y +M+  G 
Sbjct: 132 GNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGV 191

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKV--YGIKPGPDHYACMIDLLGRSGKLIE 592
           +PD  TF  +L +C   G   + R   E    V  +G     D    ++ +  + G ++ 
Sbjct: 192 RPDVYTFPCVLRSC---GGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVA 248

Query: 593 AKALLDQMVGEPDATVWKALLSACRVHGDLELGE 626
           A+ + D M    D   W A+++     G  E GE
Sbjct: 249 ARKVFDSM-AVMDCISWNAMIA-----GHFENGE 276



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 58/145 (40%), Gaps = 1/145 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           +G+  N +I  Y   G+   A   F     K+  +W+ +I G+  +G    A   F QM 
Sbjct: 531 EGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMV 590

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRG-EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
             G  P + T   +L  CS  G++  G E FH    K     N      +VD+ ++   +
Sbjct: 591 KIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQL 650

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITG 209
            EA       P   +   W  ++ G
Sbjct: 651 TEAYNFINEMPITPDAAVWGALLNG 675


>gi|356532255|ref|XP_003534689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 948

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 276/813 (33%), Positives = 426/813 (52%), Gaps = 117/813 (14%)

Query: 39  LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP--FK 96
           LN  L  +SN G +D+A  +F + +  + FTWNTM+ A+ +SGR+REA+ LF+E P   +
Sbjct: 42  LNNLLHMYSNCGMVDDAFCVFREANHANIFTWNTMLHAFFDSGRMREAENLFDEMPHIVR 101

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQM------QLEGYRPSQYTLDNVLRLCSLKGLLQ 150
           +  +W+++I GY   GL   + + F  M       ++   P  YT    ++ C      +
Sbjct: 102 DSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQNCDPFSYTC--TMKACGCLASTR 159

Query: 151 RGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI-------------------------- 184
              Q H + IK        +   LVDMY KC  I                          
Sbjct: 160 FALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLNIESPSLFCWNSMIYGYS 219

Query: 185 -----FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFP 239
                +EA ++F   P   +HV+W T+I+ +SQ G+G + +  + +M   G + N  T+ 
Sbjct: 220 QLYGPYEALHVFTRMPK-HDHVSWNTLISVFSQYGHGIRCLSTYVEMCNLGFKPNFMTYG 278

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
           S+L+ACA++S   +GA +H  IL      + ++ S LIDMYAKCG L  ARR+       
Sbjct: 279 SVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSLGEQ 338

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           N+VSW  +I G A+ G   +AL+LF +M    + +D+FT  ++L   +        + +H
Sbjct: 339 NQVSWTCLISGVAQFGLGDDALALFNQMRQASVVLDEFTLVTILGVCSGQNYAATGELLH 398

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA------ 413
              +K G +    V NA+I MYA+ G+ + A + F  M  +D ISWT++IT  +      
Sbjct: 399 GYAIKNGMDSSVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGDID 458

Query: 414 -------------------------YHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
                                     HG  EE +K +  MR   + PD V  ++ + ACA
Sbjct: 459 RARQCFDMTPERNVITWNSMLSTYIQHGFSEEGMKLYVLMRSKAVKPDWVTFATSIRACA 518

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
           +L  ++ G QV +   K G  S +SV NS+V +Y++CG I +A +VFDS+H +++I+W A
Sbjct: 519 DLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVKNLISWNA 578

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
           ++   AQNG G +A++ Y+ ML    KPD+I++V +L                       
Sbjct: 579 MMAAFAQNGLGNKAIETYEDMLRTECKPDHISYVAVL----------------------- 615

Query: 569 GIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
                        DLLGR+G L +AK L+D M  +P+ATVW ALL ACR+H D  L + A
Sbjct: 616 ------------SDLLGRAGLLDQAKNLIDGMPFKPNATVWGALLGACRIHHDSILAKTA 663

Query: 629 ANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHI 688
           A  L EL   ++  YV L+N+Y+ +G+ E+ A +RKLMK +GIRK PGCSW+E ++++H+
Sbjct: 664 AKKLMELNVEDSGGYVLLANIYTESGELENVADMRKLMKVKGIRKSPGCSWIEVDNRLHV 723

Query: 689 FISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVA 748
           F  ++  HP   ++Y K++E+M  I++ G    +    H  ++        YHSEKLA A
Sbjct: 724 FTVDETSHPQINEVYVKLEEMMKKIEDTGRYVSIVSCAHRSQK--------YHSEKLAFA 775

Query: 749 FGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISA 781
           FGLL+LP   PI++ KNLRVC DCH  +KYI +
Sbjct: 776 FGLLSLPPWMPIQVTKNLRVCNDCHL-VKYIDS 807



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 128/501 (25%), Positives = 216/501 (43%), Gaps = 93/501 (18%)

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           ++H  ++ SG +A++++ + L+ MY+ CG +D A  +   +   N  +WN+M+  F   G
Sbjct: 25  KLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFCVFREANHANIFTWNTMLHAFFDSG 84

Query: 316 FHKEALSLFKKM----------------------HARDIKI---------------DDFT 338
             +EA +LF +M                       A  IK                D F+
Sbjct: 85  RMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQNCDPFS 144

Query: 339 YPSVLN---CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG---------- 385
           Y   +    C AS      A  +H+ ++K        + N+L+DMY K G          
Sbjct: 145 YTCTMKACGCLAST---RFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFL 201

Query: 386 -----NLDC----------------AFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
                +L C                A  VF  M   D +SW +LI+  + +G     L  
Sbjct: 202 NIESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPKHDHVSWNTLISVFSQYGHGIRCLST 261

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           + +M   G  P+ +   S+LSACA ++ L++G  +HA  L+        + + L+ +YAK
Sbjct: 262 YVEMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMYAK 321

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CGC+  A RVF+S+  ++ ++WT LI G AQ G G +AL  ++QM       D  T V +
Sbjct: 322 CGCLALARRVFNSLGEQNQVSWTCLISGVAQFGLGDDALALFNQMRQASVVLDEFTLVTI 381

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYA----CMIDLLGRSGKLIEAKALLDQM 600
           L  CS    A         +   Y IK G D        +I +  R G   E  +L  + 
Sbjct: 382 LGVCSGQNYAATGE-----LLHGYAIKNGMDSSVPVGNAIITMYARCGD-TEKASLAFRS 435

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELEP-MNAMPYVQLSNMYSTAGKWEDA 659
           +   D   W A+++A   +GD++     A   F++ P  N + +  + + Y   G  E+ 
Sbjct: 436 MPLRDTISWTAMITAFSQNGDID----RARQCFDMTPERNVITWNSMLSTYIQHGFSEEG 491

Query: 660 ARVRKLMKSRGIRKEPGCSWV 680
            ++  LM+S+ ++ +    WV
Sbjct: 492 MKLYVLMRSKAVKPD----WV 508



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 80/344 (23%), Positives = 135/344 (39%), Gaps = 77/344 (22%)

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
           A+ +H+ ++ +G +   F+ N L+ MY+  G +D AF VF      ++ +W +++     
Sbjct: 23  ARKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFCVFREANHANIFTWNTMLHAFFD 82

Query: 415 HGSYEEALKYFSDM------------RISGICPDHVVVSSI------------------- 443
            G   EA   F +M             ISG C + +   SI                   
Sbjct: 83  SGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQNCDP 142

Query: 444 ------LSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN-------- 489
                 + AC  L    F  Q+HA  +K    +   + NSLV +Y KCG I         
Sbjct: 143 FSYTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDMYIKCGAITLAETVFLN 202

Query: 490 -----------------------DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFY 526
                                  +A  VF  M   D ++W  LI   +Q G G   L  Y
Sbjct: 203 IESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPKHDHVSWNTLISVFSQYGHGIRCLSTY 262

Query: 527 DQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY--ACMIDLL 584
            +M   G KP+++T+  +L AC+      + +W      ++  ++   D +  + +ID+ 
Sbjct: 263 VEMCNLGFKPNFMTYGSVLSACASIS---DLKWGAHLHARILRMEHSLDAFLGSGLIDMY 319

Query: 585 GRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
            + G L  A+ + + + GE +   W  L+S     G   LG+ A
Sbjct: 320 AKCGCLALARRVFNSL-GEQNQVSWTCLISGVAQFG---LGDDA 359


>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
 gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
          Length = 631

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 248/633 (39%), Positives = 376/633 (59%), Gaps = 2/633 (0%)

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           MY+K      A+ L ++ P  +  V WT +I+G  QNGY   A+  F  MR E ++ N F
Sbjct: 1   MYSKLDLPNPAQLLLQLTPT-RCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDF 59

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           TFP    A  A+     G Q+H   L  G   + +V  +  DMY+K G    A+RL +  
Sbjct: 60  TFPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEM 119

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              N   WN+ I      G   +A+  F +      + D  T+ + LN  A    L+  +
Sbjct: 120 PPRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGR 179

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H L++++GFEG   V N +ID+Y K   ++ A MVFN M  ++ +SW +++  C  + 
Sbjct: 180 QLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQND 239

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
             E+A   F   R  GI     +VSS++SA A ++ LEFG+ VHA+ +K+     + V +
Sbjct: 240 EKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGS 299

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           +LV +Y KCG I D  +VF  M  R++++W A+I G A  G    A+  +++M +     
Sbjct: 300 ALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAVA- 358

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           +Y+T + +L ACS  G  +     FESM   Y I+PG +HYAC+ D+LGR+G +  A   
Sbjct: 359 NYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEF 418

Query: 597 LDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
           + +M   P  +VW ALL+ACRV+G+ ELG+ AA+NLF+L+P ++  +V LSNM++ AG+W
Sbjct: 419 VQKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAGRW 478

Query: 657 EDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA 716
           ++A  VRK MK  GI+K  GCSWV   ++VH+F ++D  H   ++I + + ++   ++ A
Sbjct: 479 DEATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQAMLVKLRTEMQAA 538

Query: 717 GYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAM 776
           GY+PD N+AL+++EEE K   + YHSEK+A+AFGL+ LP G PIRI KNLR+CGDCH+A 
Sbjct: 539 GYMPDTNYALYDLEEEEKMTEVGYHSEKIALAFGLIALPPGVPIRITKNLRICGDCHSAF 598

Query: 777 KYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           K+IS +  R II+RD+NRFH F+   CSC D+W
Sbjct: 599 KFISGIVGREIIVRDNNRFHRFRDSQCSCRDFW 631



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 214/439 (48%), Gaps = 12/439 (2%)

Query: 86  AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL 145
           A+ L   TP +   TW++LI G    G    A   F +M+ E  +P+ +T     +  + 
Sbjct: 11  AQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTFPCAFKASTA 70

Query: 146 KGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTT 205
             L   G+Q H  A+K     + FV     DMY+K    FEA+ LF   P  +N   W  
Sbjct: 71  LCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPP-RNVAVWNA 129

Query: 206 MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
            I+    +G   KAI+ F + R  G E +  TF + L ACA     D G Q+HG ++ SG
Sbjct: 130 YISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSG 189

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
           FE +V V + +ID+Y KC +++ A  +       N VSW +M+    +    ++A  +F 
Sbjct: 190 FEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFL 249

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
                 I++ D+   SV++ +A    L   +SVH+L VK   EG  FV +AL+DMY K G
Sbjct: 250 MGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCG 309

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
           +++    VF+ M +++++SW ++I+G A+ G  + A+  F +M+   +  ++V +  +LS
Sbjct: 310 SIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAV-ANYVTLICVLS 368

Query: 446 ACAELTVLEFGQQVHAVF-----LKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT 500
           AC+    ++ G ++         ++ G      + + L     + G +  A      M  
Sbjct: 369 ACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADML----GRAGMVERAYEFVQKMPI 424

Query: 501 RDVIT-WTALIMGCAQNGK 518
           R  I+ W AL+  C   G+
Sbjct: 425 RPTISVWGALLNACRVYGE 443



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 125/434 (28%), Positives = 211/434 (48%), Gaps = 26/434 (5%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F   +    Y+ +G   EA++LF+E P +N   W++ I      G   +A + F + +
Sbjct: 92  DKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGRPGKAIDKFIEFR 151

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G  P   T    L  C+    L  G Q HG  I++ F+ +  V  G++D+Y KCK + 
Sbjct: 152 RVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVE 211

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            AE +F      +N V+W TM+    QN    KA   F   R EG+E   +   S+++A 
Sbjct: 212 LAEMVFNGM-GRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISAY 270

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A +S  +FG  VH   + +  E +++V SAL+DMY KCG ++   ++       N VSWN
Sbjct: 271 AGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWN 330

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +MI G+A QG    A++LF++M +  +      Y +++ C  S      A  + + I ++
Sbjct: 331 AMISGYAHQGDVDMAMTLFEEMQSEAVA----NYVTLI-CVLSACSRGGAVKLGNEIFES 385

Query: 366 GFEGYKFVNNA-----LIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYE 419
             + Y+    A     + DM  + G ++ A+     M  +  IS W +L+  C  +G  E
Sbjct: 386 MRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNACRVYGEPE 445

Query: 420 ----EALKYFS-DMRISGICPDHVVVSSILSACA---ELTVLEFGQQVHAVFLKSG-GCS 470
                A   F  D + SG   +HV++S++ +A     E T++   +++  V +K G GCS
Sbjct: 446 LGKIAADNLFKLDPKDSG---NHVLLSNMFAAAGRWDEATLVR--KEMKDVGIKKGAGCS 500

Query: 471 SLSVDNSLVLVYAK 484
            ++  N + +  AK
Sbjct: 501 WVTAKNKVHVFQAK 514



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 124/294 (42%), Gaps = 46/294 (15%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNET---PFKN 97
           ALVD +   G I++  Q+F +M +R+  +WN MI+ YA+ G +  A  LF E       N
Sbjct: 300 ALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAVAN 359

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR--PSQYTLDNVLRLCSLKGLLQRGEQF 155
           + T   ++   S  G      E+F  M+ + YR  P       +  +    G+++R  +F
Sbjct: 360 YVTLICVLSACSRGGAVKLGNEIFESMR-DRYRIEPGAEHYACIADMLGRAGMVERAYEF 418

Query: 156 -HGYAIKTCFD-----LNAFVVTGLVDMYAKCKCIFEAEYLFKMFP-DGKNHVAWTTMIT 208
                I+         LNA  V G  ++         A+ LFK+ P D  NHV  + M  
Sbjct: 419 VQKMPIRPTISVWGALLNACRVYGEPELGK-----IAADNLFKLDPKDSGNHVLLSNM-- 471

Query: 209 GYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD----FGAQVHGCILSS 264
            ++  G   +A    ++M+  G++            C+ V+A++    F A+       +
Sbjct: 472 -FAAAGRWDEATLVRKEMKDVGIKKG--------AGCSWVTAKNKVHVFQAK------DT 516

Query: 265 GFEANVYVQSALIDMYAK------CGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
             E N  +Q+ L+ +  +        D + A   LE  E   EV ++S  +  A
Sbjct: 517 SHERNSEIQAMLVKLRTEMQAAGYMPDTNYALYDLEEEEKMTEVGYHSEKIALA 570


>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Vitis vinifera]
          Length = 853

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 238/662 (35%), Positives = 389/662 (58%), Gaps = 1/662 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  +++I  Y+ +G + +A+ LF+  P K+   W+ ++ GY   G    A  +F +M+
Sbjct: 181 DVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMR 240

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
                P+  T   VL +C+ + ++  G Q HG  + +  ++++ V   L+ MYAKC  +F
Sbjct: 241 RTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLF 300

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A  LF M P   + V W  MI+GY QNG+  +A   F +M    ++ +  TF S L   
Sbjct: 301 DARRLFDMMPK-TDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLL 359

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           +  +    G ++H  I+ +G   +V+++SALID+Y KC D++ AR++ +     + V   
Sbjct: 360 SEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCT 419

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +MI G+   G +  AL +F+ +    ++ +  T  SVL   A    L   K +H  I+K 
Sbjct: 420 AMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKN 479

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G  G  +V +A++DMYAK G LD A   F  + DKD + W S+IT C+ +G  EEA+  F
Sbjct: 480 GHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLF 539

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             M ++G   D V +S+ LSACA L  L +G+++HA  ++    S L  +++L+ +Y+KC
Sbjct: 540 RQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKC 599

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G ++ A RVFD+M  ++ ++W ++I     +G+ K++L  +  ML  G +PD++TF+ ++
Sbjct: 600 GNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAII 659

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
            AC HAG  +    YF  M +  GI    +HYACM+DL GR+G+L EA  +++ M   PD
Sbjct: 660 SACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPD 719

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
           A VW  LL ACR+HG++EL E A+ NLF+L+P N+  YV LSN+++ AG+WE   ++R L
Sbjct: 720 AGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSL 779

Query: 666 MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFA 725
           MK RG++K PGCSW++ N+  H+F++ DR HP  + IY  +  + L +++ GYVP +   
Sbjct: 780 MKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIYLLLKNLFLELRKEGYVPQLYLP 839

Query: 726 LH 727
           +H
Sbjct: 840 MH 841



 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 175/568 (30%), Positives = 285/568 (50%), Gaps = 23/568 (4%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           +G     ++  Y   G   +AK +F +        W+ +I G++  G    A   +++M 
Sbjct: 80  NGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKML 139

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G  P +YT   V++ C     +  G   H       F+L+ FV + L+  Y++  CI 
Sbjct: 140 GCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIH 199

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A YLF   P  K+ V W  M+ GY +NG    A   F +MR      N  TF  +L+ C
Sbjct: 200 DARYLFDRMPS-KDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVC 258

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A+    +FG+Q+HG ++SSG E +  V + L+ MYAKCG L  ARRL +     + V+WN
Sbjct: 259 ASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWN 318

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
            MI G+ + GF  EA  LF +M +  +K D  T+ S L   +    L   K +H  I++ 
Sbjct: 319 GMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRN 378

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G     F+ +ALID+Y K  +++ A  +F+     D++  T++I+G   +G    AL+ F
Sbjct: 379 GVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIF 438

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             +    +  + V ++S+L ACA L  L  G+++H   LK+G   S  V ++++ +YAKC
Sbjct: 439 RWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKC 498

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G ++ A++ F  +  +D + W ++I  C+QNGK +EA+  + QM   GTK D ++    L
Sbjct: 499 GRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAAL 558

Query: 546 FACS-----HAGLAENA---RWYFESMDKVYGIKPGPDHYA--CMIDLLGRSGKLIEAKA 595
            AC+     H G   +A   R  F S           D +A   +ID+  + G L  A  
Sbjct: 559 SACANLPALHYGKEIHAFMMRGAFRS-----------DLFAESALIDMYSKCGNLDLACR 607

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLE 623
           + D M  E +   W ++++A   HG L+
Sbjct: 608 VFDTM-EEKNEVSWNSIIAAYGNHGRLK 634



 Score =  232 bits (592), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 150/481 (31%), Positives = 237/481 (49%), Gaps = 34/481 (7%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  L  ++  G + +A +LF+ M   D  TWN MI+ Y  +G + EA  LF+E       
Sbjct: 287 NTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHE------- 339

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
                                   M     +P   T  + L L S    L++G++ H Y 
Sbjct: 340 ------------------------MISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYI 375

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           I+    L+ F+ + L+D+Y KC+ +  A  +F       + V  T MI+GY  NG    A
Sbjct: 376 IRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTP-VDIVVCTAMISGYVLNGMNNNA 434

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           +E FR +  E + +N  T  S+L ACA ++A   G ++HG IL +G   + YV SA++DM
Sbjct: 435 LEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDM 494

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           YAKCG LD A +        + V WNSMI   ++ G  +EA+ LF++M     K D  + 
Sbjct: 495 YAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSI 554

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
            + L+  A+   L+  K +H+ +++  F    F  +ALIDMY+K GNLD A  VF+ M++
Sbjct: 555 SAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEE 614

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           K+ +SW S+I     HG  +++L  F  M   GI PDHV   +I+SAC     ++ G   
Sbjct: 615 KNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHY 674

Query: 460 HAVFLKSGGC-SSLSVDNSLVLVYAKCGCINDANRVFDSM-HTRDVITWTALIMGCAQNG 517
                +  G  + +     +V ++ + G +N+A  + +SM  + D   W  L+  C  +G
Sbjct: 675 FRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHG 734

Query: 518 K 518
            
Sbjct: 735 N 735



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 137/506 (27%), Positives = 242/506 (47%), Gaps = 17/506 (3%)

Query: 130 RPSQYTLDN----------VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYA 179
           +P Q+++ N          +L+ C+    L +G Q H   +      N  + T L+ MY 
Sbjct: 33  KPLQFSIHNDDSLAPQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYV 92

Query: 180 KCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFP 239
            C    +A+ +F       +   W  MI G++  G    A+  +  M   G   +++TFP
Sbjct: 93  LCGAFLDAKNIFYQLRLWCSE-PWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFP 151

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
            ++ AC  +++   G  VH  I   GFE +V+V S+LI  Y++ G +  AR L +     
Sbjct: 152 YVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSK 211

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           + V WN M+ G+ + G    A  +F +M   +   +  T+  VL+  AS I +N    +H
Sbjct: 212 DGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLH 271

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
            L+V +G E    V N L+ MYAK G+L  A  +F++M   D+++W  +I+G   +G  +
Sbjct: 272 GLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMD 331

Query: 420 EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
           EA   F +M  + + PD +  SS L   +E   L  G+++H   +++G    + + ++L+
Sbjct: 332 EASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALI 391

Query: 480 LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
            +Y KC  +  A ++FD     D++  TA+I G   NG    AL+ +  +L    + + +
Sbjct: 392 DIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSV 451

Query: 540 TFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY--ACMIDLLGRSGKLIEAKALL 597
           T   +L AC  AGLA       E    +     G   Y  + ++D+  + G+L  A    
Sbjct: 452 TLASVLPAC--AGLAALTLGK-ELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTF 508

Query: 598 DQMVGEPDATVWKALLSACRVHGDLE 623
              + + DA  W +++++C  +G  E
Sbjct: 509 IG-ISDKDAVCWNSMITSCSQNGKPE 533



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 121/272 (44%), Gaps = 34/272 (12%)

Query: 20  IGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYA 78
           +G   + H + N    +  +  A++D ++  G +D A Q F  +SD+D   WN+MI + +
Sbjct: 468 LGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCS 527

Query: 79  NSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDN 138
            +G+                                 EA +LF QM + G +    ++  
Sbjct: 528 QNGKPE-------------------------------EAIDLFRQMGMAGTKYDCVSISA 556

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
            L  C+    L  G++ H + ++  F  + F  + L+DMY+KC  +  A  +F    + K
Sbjct: 557 ALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEE-K 615

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           N V+W ++I  Y  +G    ++  F  M  +G++ +  TF +I++AC      D G    
Sbjct: 616 NEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYF 675

Query: 259 GCILSS-GFEANVYVQSALIDMYAKCGDLDSA 289
            C+    G  A +   + ++D++ + G L+ A
Sbjct: 676 RCMTEELGIMARMEHYACMVDLFGRAGRLNEA 707


>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
          Length = 713

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 243/675 (36%), Positives = 387/675 (57%), Gaps = 8/675 (1%)

Query: 53  DEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYG 112
           D   Q    +S  D    N  +     +G L  A+++F++   K+  +W++LI GY N  
Sbjct: 35  DNLSQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNAN 94

Query: 113 LDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV 171
              EA  LF  M++E G R   + L    + C L   +  GE  HGYA+KT    + FV 
Sbjct: 95  DSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVG 154

Query: 172 TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV 231
           + L+DMY K   IFE   +F   P  +N V+WT +ITG  + GY  +A+  F +M    V
Sbjct: 155 SALLDMYTKNGKIFEGRRVFHEMP-MRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRV 213

Query: 232 ESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR 291
           E + +TF   L ACA   A ++G ++H   +  GF+ + +V + L  MY KCG L+    
Sbjct: 214 EYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLT 273

Query: 292 LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID 351
           L E   + + VSW ++I    + G  + A+  F +M   D+  +++T+ +V++  A+   
Sbjct: 274 LFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLAR 333

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
           +   + +H+LI+  G      V N+++ MYAK G L  + ++F+ M  +D++SW+++I G
Sbjct: 334 IEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAG 393

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
               G   EA +  S MR+ G  P    ++S+LSAC  + +LE G+Q+HA  L  G   +
Sbjct: 394 YXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHT 453

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
             V ++L+ +Y KCG I +A+R+FD+    D+++WTA+I G A++G  +E +  ++++  
Sbjct: 454 AMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPR 513

Query: 532 RGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLI 591
            G +PD +TF+G+L ACSHAGL +    YF +M K Y I P  +HY CMIDLL R+G+L 
Sbjct: 514 VGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLS 573

Query: 592 EAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYS 651
           +A+ +++ M    D  VW  LL ACRVHGD+E G R A  + +LEP  A  ++ L+N+Y+
Sbjct: 574 DAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYA 633

Query: 652 TAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKID---- 707
           + GKW +AA +RKLMKS+G+ KEPG SW++    V  F++ DR HP   DIY+ +D    
Sbjct: 634 SKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLAS 693

Query: 708 --EIMLLIKEAGYVP 720
             E+   ++E G++P
Sbjct: 694 RTELADCVQETGFLP 708


>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g30700; AltName: Full=Protein DYW9
 gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
 gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
 gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 792

 Score =  471 bits (1211), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 247/659 (37%), Positives = 376/659 (57%), Gaps = 5/659 (0%)

Query: 152 GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYS 211
           G   HG A+    D    + + +V MY K   + +A  +F   P+ K+ + W TMI+GY 
Sbjct: 138 GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPE-KDTILWNTMISGYR 196

Query: 212 QNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV 270
           +N    ++I+ FRD+  E     +  T   IL A A +     G Q+H     +G  ++ 
Sbjct: 197 KNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHD 256

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
           YV +  I +Y+KCG +     L       + V++N+MI G+   G  + +LSLFK++   
Sbjct: 257 YVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
             ++   T  S++        L    ++H   +K+ F  +  V+ AL  +Y+K   ++ A
Sbjct: 317 GARLRSSTLVSLVPVSG---HLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESA 373

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
             +F+   +K + SW ++I+G   +G  E+A+  F +M+ S   P+ V ++ ILSACA+L
Sbjct: 374 RKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQL 433

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
             L  G+ VH +   +   SS+ V  +L+ +YAKCG I +A R+FD M  ++ +TW  +I
Sbjct: 434 GALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMI 493

Query: 511 MGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGI 570
            G   +G+G+EAL  + +ML  G  P  +TF+ +L+ACSHAGL +     F SM   YG 
Sbjct: 494 SGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGF 553

Query: 571 KPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAAN 630
           +P   HYACM+D+LGR+G L  A   ++ M  EP ++VW+ LL ACR+H D  L    + 
Sbjct: 554 EPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSE 613

Query: 631 NLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFI 690
            LFEL+P N   +V LSN++S    +  AA VR+  K R + K PG + +E     H+F 
Sbjct: 614 KLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFT 673

Query: 691 SEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFG 750
           S D+ HP   +IY K++++   ++EAGY P+   ALH+VEEE +E+ +  HSE+LA+AFG
Sbjct: 674 SGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFG 733

Query: 751 LLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           L+    G  IRI KNLRVC DCHT  K IS +  R I++RD+NRFHHFK G CSCGDYW
Sbjct: 734 LIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 137/491 (27%), Positives = 244/491 (49%), Gaps = 16/491 (3%)

Query: 33  VKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDG-----FTWNTMIAAYANSGRLREAK 87
           +KP S      +  ++    D AG++    +  DG        + ++  Y    R+ +A+
Sbjct: 115 LKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDAR 174

Query: 88  KLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVLRLCSLK 146
           K+F+  P K+   W+++I GY    + +E+ ++F  +  E   R    TL ++L   +  
Sbjct: 175 KVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAEL 234

Query: 147 GLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF--PDGKNHVAWT 204
             L+ G Q H  A KT    + +V+TG + +Y+KC  I     LF+ F  PD    VA+ 
Sbjct: 235 QELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDI---VAYN 291

Query: 205 TMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS 264
            MI GY+ NG    ++  F+++ + G      T  S++     +        +HG  L S
Sbjct: 292 AMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM---LIYAIHGYCLKS 348

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLF 324
            F ++  V +AL  +Y+K  +++SAR+L + S   +  SWN+MI G+ + G  ++A+SLF
Sbjct: 349 NFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLF 408

Query: 325 KKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
           ++M   +   +  T   +L+  A    L+  K VH L+  T FE   +V+ ALI MYAK 
Sbjct: 409 REMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKC 468

Query: 385 GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
           G++  A  +F+LM  K+ ++W ++I+G   HG  +EAL  F +M  SGI P  V    +L
Sbjct: 469 GSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVL 528

Query: 445 SACAELTVLEFGQQV-HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD- 502
            AC+   +++ G ++ +++  + G   S+     +V +  + G +  A +  ++M     
Sbjct: 529 YACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPG 588

Query: 503 VITWTALIMGC 513
              W  L+  C
Sbjct: 589 SSVWETLLGAC 599



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 127/249 (51%), Gaps = 4/249 (1%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +   Y+    +  A+KLF+E+P K+  +W+++I GY+  GL  +A  LF +MQ   + P+
Sbjct: 360 LTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPN 419

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
             T+  +L  C+  G L  G+  H     T F+ + +V T L+ MYAKC  I EA  LF 
Sbjct: 420 PVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFD 479

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
           +    KN V W TMI+GY  +G G +A+  F +M   G+     TF  +L AC+      
Sbjct: 480 LMTK-KNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVK 538

Query: 253 FGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
            G ++   ++   GFE +V   + ++D+  + G L  A + +E   I+   S    ++G 
Sbjct: 539 EGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGA 598

Query: 312 ARQGFHKEA 320
            R   HK+ 
Sbjct: 599 CR--IHKDT 605



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 108/450 (24%), Positives = 192/450 (42%), Gaps = 37/450 (8%)

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
           AQ H  I+  GF  ++ + + L    +  G +  AR +    +  +   +N ++ GF+  
Sbjct: 37  AQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVN 96

Query: 315 GFHKEALSLFKKMH-ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
                +LS+F  +  + D+K +  TY   ++  +   D    + +H   V  G +    +
Sbjct: 97  ESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLL 156

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
            + ++ MY K   ++ A  VF+ M +KD I W ++I+G   +  Y E+++ F D+ I+  
Sbjct: 157 GSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDL-INES 215

Query: 434 CP--DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
           C   D   +  IL A AEL  L  G Q+H++  K+G  S   V    + +Y+KCG I   
Sbjct: 216 CTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMG 275

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
           + +F      D++ + A+I G   NG+ + +L  + +++  G +    T V L+    H 
Sbjct: 276 SALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHL 335

Query: 552 GLAENARWY-------------------------FESMDKVYGIKPGPD--HYACMIDLL 584
            L      Y                          ES  K++   P      +  MI   
Sbjct: 336 MLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395

Query: 585 GRSGKLIEAKALLDQMVG---EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAM 641
            ++G   +A +L  +M      P+      +LSAC   G L LG +  ++L       + 
Sbjct: 396 TQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLG-KWVHDLVRSTDFESS 454

Query: 642 PYVQ--LSNMYSTAGKWEDAARVRKLMKSR 669
            YV   L  MY+  G   +A R+  LM  +
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKK 484


>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
          Length = 503

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 220/503 (43%), Positives = 327/503 (65%)

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           M+ G+      K+AL LF  +H    K D  T  +        + L+  K +H+  +K G
Sbjct: 1   MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
           F+    VN+ ++DMY K G++  A +VFN +   D ++WTS+I+GC  +G+ ++AL+ + 
Sbjct: 61  FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 120

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
            MR S + PD    ++++ A + +T LE G+Q+HA  +K    S   V  SLV +YAKCG
Sbjct: 121 RMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCG 180

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
            I DA R+F  M+ R++  W A+++G AQ+G  +EA+  +  M + G +PD ++F+G+L 
Sbjct: 181 NIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILS 240

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ACSHAGL   A  Y  SM   YGI+P  +HY+C++D LGR+G + EA  +++ M  +  A
Sbjct: 241 ACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASA 300

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
           ++ +ALL ACR+ GD+E G+R A  LF LEP ++  YV LSN+Y+ A +W+D    RK+M
Sbjct: 301 SINRALLGACRIQGDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMM 360

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFAL 726
           K + ++K+PG SW++  + +H+F+ +DR HP    IY K++E+M  I+E GYVPD  F L
Sbjct: 361 KRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVL 420

Query: 727 HNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRH 786
            +VE+E KE  L YHSEKLA+A+GL++ P    IR+ KNLRVCGDCH A+KYIS V+ R 
Sbjct: 421 LDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFERE 480

Query: 787 IILRDSNRFHHFKAGNCSCGDYW 809
           I+LRD+NRFHHF+ G CSCGDYW
Sbjct: 481 IVLRDANRFHHFRDGVCSCGDYW 503



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 158/294 (53%), Gaps = 1/294 (0%)

Query: 206 MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
           M+ GY     G KA+E F  +   G +S+Q T  +   AC  +   D G Q+H   + +G
Sbjct: 1   MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
           F+++++V S ++DMY KCGD+ +A  +  Y    ++V+W SMI G    G   +AL ++ 
Sbjct: 61  FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 120

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           +M    +  D++T+ +++   +    L   + +H+ ++K       FV  +L+DMYAK G
Sbjct: 121 RMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCG 180

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
           N++ A+ +F  M  +++  W +++ G A HG+ EEA+  F  M+  GI PD V    ILS
Sbjct: 181 NIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILS 240

Query: 446 ACAELTVL-EFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
           AC+   +  E  + +H++    G    +   + LV    + G + +A++V ++M
Sbjct: 241 ACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETM 294



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 166/318 (52%), Gaps = 3/318 (0%)

Query: 104 LIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC 163
           +++GY       +A ELF  +   G +  Q TL    + C    LL +G+Q H +AIK  
Sbjct: 1   MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
           FD +  V +G++DMY KC  +  A  +F  +    + VAWT+MI+G   NG   +A+  +
Sbjct: 61  FDSDLHVNSGILDMYIKCGDMVNAGIVFN-YISAPDDVAWTSMISGCVDNGNEDQALRIY 119

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
             MR   V  +++TF +++ A + V+A + G Q+H  ++     ++ +V ++L+DMYAKC
Sbjct: 120 HRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKC 179

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
           G+++ A RL +   + N   WN+M+VG A+ G  +EA++LFK M +  I+ D  ++  +L
Sbjct: 180 GNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGIL 239

Query: 344 N-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV 402
           + C  + +     + +HS+    G E      + L+D   + G +  A  V   M  K  
Sbjct: 240 SACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKAS 299

Query: 403 ISWT-SLITGCAYHGSYE 419
            S   +L+  C   G  E
Sbjct: 300 ASINRALLGACRIQGDVE 317



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 133/295 (45%), Gaps = 22/295 (7%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D    + ++  Y   G +  A  +FN     +   W+S+I G  + G + +A  ++ +
Sbjct: 62  DSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHR 121

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+     P +YT   +++  S    L++G Q H   IK     + FV T LVDMYAKC  
Sbjct: 122 MRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGN 181

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I +A  LFK   + +N   W  M+ G +Q+G   +A+  F+ M+  G+E ++ +F  IL+
Sbjct: 182 IEDAYRLFKKM-NVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILS 240

Query: 244 AC--AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           AC  A +++  +   +H      G E  +   S L+D   + G +  A +++E       
Sbjct: 241 ACSHAGLTSEAY-EYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKAS 299

Query: 302 VSWNSMIVG------------------FARQGFHKEALSLFKKMHARDIKIDDFT 338
            S N  ++G                  FA + F   A  L   ++A   + DD T
Sbjct: 300 ASINRALLGACRIQGDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVT 354



 Score = 42.4 bits (98), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 6/119 (5%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF-- 98
           +LVD ++  G I++A +LF+KM+ R+   WN M+   A  G   EA  LF          
Sbjct: 171 SLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEP 230

Query: 99  --FTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQ 154
              ++  ++   S+ GL  EA+E    M  + G  P       ++      GL+Q  ++
Sbjct: 231 DRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADK 289


>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 676

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 255/680 (37%), Positives = 393/680 (57%), Gaps = 14/680 (2%)

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
           +Q+T  N   L +LK L       H + +K+   L +F    L+D Y KC  I EA  LF
Sbjct: 9   AQFT--NKKSLTTLKSL-------HTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLF 58

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
              P+ ++ V W +MI+ +   G   +AIE + +M  EGV  + +TF +I  A + +   
Sbjct: 59  DEMPN-RHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVS 117

Query: 252 DFGAQVHGCILSSGFE-ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
             G + HG  +  GFE ++ +V + ++DMYAK G +  AR + +     + V + ++IVG
Sbjct: 118 REGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVG 177

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           + ++G   EAL +F+ M    IK +++T  SVL    +  DL N K +H L+VK+G E  
Sbjct: 178 YNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESV 237

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
                +L+ MY+K   ++ +  VFN +     ++WTS I G   +G  E AL  F +M  
Sbjct: 238 VASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIR 297

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
             I P+H   SSIL AC+ L +LE G+Q+HAV +K G   +  VD +L+ +Y KCG +  
Sbjct: 298 CSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEK 357

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           A  VF+S+   DV++   +I   AQNG G EAL+ +++M   G KP+ +TF+ +L AC++
Sbjct: 358 ARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNN 417

Query: 551 AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
           AGL E     F  +   + I+   DHY CMIDLLGR+ +  EA  L+++    PD   W+
Sbjct: 418 AGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEG-KNPDVIQWR 476

Query: 611 ALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRG 670
            LL+AC++HG++E+ E+    + +  P +   ++ L+N+Y++AGKW++   ++   +   
Sbjct: 477 TLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLR 536

Query: 671 IRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVE 730
           ++K P  SWV+ + +VH F++ D  HP   +I   + E++  +   GY PD  F L ++E
Sbjct: 537 LKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLE 596

Query: 731 EEGKEIGLAYHSEKLAVAFGLL-TLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIIL 789
           EE K   L YHSEKLA+AF L  T  +   IRIFKNLRVCGDCH+ +K++S +  R II 
Sbjct: 597 EEKKISALYYHSEKLAIAFALWKTCGKNTAIRIFKNLRVCGDCHSWIKFVSLLTGRDIIA 656

Query: 790 RDSNRFHHFKAGNCSCGDYW 809
           RD+ RFHHFK G CSC DYW
Sbjct: 657 RDAKRFHHFKGGICSCKDYW 676



 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 152/487 (31%), Positives = 263/487 (54%), Gaps = 12/487 (2%)

Query: 52  IDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNY 111
           I ++G LF        F  + +I  Y     + EA+KLF+E P ++  TW+S+I  + + 
Sbjct: 27  ILKSGSLF-------SFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSR 79

Query: 112 GLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDL-NAFV 170
           G   EA EL+  M  EG  P  YT   + +  S  G+ + G++ HG A+   F++ + FV
Sbjct: 80  GKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFV 139

Query: 171 VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG 230
            TG+VDMYAK   + +A ++F    D K+ V +T +I GY+Q G   +A+E F DM    
Sbjct: 140 ATGIVDMYAKFGKMKDARFVFDRVLD-KDVVLFTALIVGYNQRGLDGEALEVFEDMVGSR 198

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           ++ N++T  S+L +C  +     G  +HG ++ SG E+ V  Q++L+ MY+KC  ++ + 
Sbjct: 199 IKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSI 258

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
           ++       + V+W S IVG  + G  + ALS+F++M    I  + FT+ S+L+  +S  
Sbjct: 259 KVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLA 318

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
            L   + +H++ VK G +G K+V+ ALI +Y K GN++ A  VF  + + DV+S  ++I 
Sbjct: 319 MLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIY 378

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
             A +G   EAL+ F  M+  G  P+ V   SIL AC    ++E G Q+ ++ +++    
Sbjct: 379 AYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSL-IRNNHSI 437

Query: 471 SLSVDN--SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
            L+ D+   ++ +  +     +A  + +     DVI W  L+  C  +G+ + A +F  +
Sbjct: 438 ELTRDHYTCMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKK 497

Query: 529 MLARGTK 535
           ML +  +
Sbjct: 498 MLDQAPR 504



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 118/221 (53%), Gaps = 2/221 (0%)

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
           Y S++  F +   L   KS+H+ I+K+G   + F  + LID Y K   +  A  +F+ M 
Sbjct: 4   YTSLIAQFTNKKSLTTLKSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMP 62

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
           ++ +++W S+I+     G  +EA++ + +M   G+ PD    S+I  A +E+ V   GQ+
Sbjct: 63  NRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQK 122

Query: 459 VHAVFLKSG-GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
            H + +  G   S   V   +V +YAK G + DA  VFD +  +DV+ +TALI+G  Q G
Sbjct: 123 AHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRG 182

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENAR 558
              EAL+ ++ M+    KP+  T   +L +C + G   N +
Sbjct: 183 LDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGK 223



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 85/191 (44%), Gaps = 42/191 (21%)

Query: 32  SVKPASDLNR----ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREA 86
           +VK   D N+    AL+  +   G +++A  +FE +++ D  + NTMI AYA +G     
Sbjct: 330 TVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNG----- 384

Query: 87  KKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLK 146
                              +G+       EA ELF +M+  G++P+  T  ++L  C+  
Sbjct: 385 -------------------FGH-------EALELFERMKKLGHKPNVVTFISILLACNNA 418

Query: 147 GLLQRGEQ-FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNH--VAW 203
           GL++ G Q F         +L     T ++D+  + K   EA  L +   +GKN   + W
Sbjct: 419 GLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIE---EGKNPDVIQW 475

Query: 204 TTMITGYSQNG 214
            T++     +G
Sbjct: 476 RTLLNACKIHG 486


>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 266/783 (33%), Positives = 417/783 (53%), Gaps = 38/783 (4%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           + D F  N +I+AY   G +R+A K+F+     N  ++++LI G+S    + EA ELF+ 
Sbjct: 127 EEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFA 186

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M   G  P++YT   +L  C      Q G Q HG  +K       F+   L+ +Y KC  
Sbjct: 187 MLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGF 246

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV-EGVESNQFTFPSIL 242
           +     LF+  P+ ++  +W T+I+   +     +A + FR M++ +G++ + F+  ++L
Sbjct: 247 LDLVLRLFEEMPE-RDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLL 305

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           TACA       G Q+H   L  G E+++ V S+LI  Y KCG  +    L E   I + +
Sbjct: 306 TACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVI 365

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARD------------------------------- 331
           +W  MI  +   G    A+ +F KM  R+                               
Sbjct: 366 TWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEG 425

Query: 332 IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
           ++I D T  S++           ++ +   ++K G      +  AL+DMY + G ++ A 
Sbjct: 426 VEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAE 485

Query: 392 MVF--NLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG-ICPDHVVVSSILSACA 448
            +F    +++      TS+I G A +G   EA+  F   +  G I  D V+ +SILS C 
Sbjct: 486 KIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCG 545

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
            +   E G+Q+H   LKSG  +   V N+ V +Y+KC  ++DA RVF++M+ +D+++W  
Sbjct: 546 SIGFHEMGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNG 605

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA--GLAENARWYFESMDK 566
           L+ G   + +G +AL  + +M   G KPD ITF  ++ A  H    L ++ R  F SM+ 
Sbjct: 606 LVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMET 665

Query: 567 VYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGE 626
            + IKP  +HYA  I +LGR G L EA+  +  M  EPD  VW+ALL++CR++ +  L +
Sbjct: 666 EHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEK 725

Query: 627 RAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQV 686
            AA N+  +EP + + Y+  SN+YS +G+W  + +VR+ M+ +G RK P  SW+   +++
Sbjct: 726 LAARNILAVEPKDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWIIHENKI 785

Query: 687 HIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLA 746
           H F + DR HP   DIYS ++ ++L   + GYVPD +F L  VEE  K+  L YHS KLA
Sbjct: 786 HSFYARDRSHPQGKDIYSGLEILILECLKVGYVPDTSFVLQEVEERQKKEFLFYHSGKLA 845

Query: 747 VAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCG 806
             FG+L    G PI+I KN+R+CGDCH  +KY+S V  R I+LRD++ FH F  G CSC 
Sbjct: 846 ATFGILMTKPGKPIQIVKNVRLCGDCHNFLKYVSIVTRRKILLRDTSGFHWFIDGQCSCT 905

Query: 807 DYW 809
           DYW
Sbjct: 906 DYW 908



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 148/553 (26%), Positives = 243/553 (43%), Gaps = 81/553 (14%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS 109
           G +D   +LFE+M +RD  +WNT+I++            L  E  +              
Sbjct: 245 GFLDLVLRLFEEMPERDITSWNTVISS------------LVKEFKYD------------- 279

Query: 110 NYGLDIEAFELFWQMQL-EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA 168
                 EAF+ F  MQL +G +   ++L  +L  C+      +G+Q H  A+K   + + 
Sbjct: 280 ------EAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHL 333

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY------------------ 210
            V + L+  Y KC    +   LF+  P  ++ + WT MIT Y                  
Sbjct: 334 SVSSSLIGFYTKCGSANDVTDLFETMPI-RDVITWTGMITSYMEFGMLDSAVEVFNKMPK 392

Query: 211 -------------SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
                        S+N  G +A+E F +M  EGVE +  T  SI+TAC  + +     Q+
Sbjct: 393 RNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQI 452

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS--WNSMIVGFARQG 315
            G ++  G  +N  +++AL+DMY +CG ++ A ++     ++N+ +    SMI G+AR G
Sbjct: 453 QGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNG 512

Query: 316 FHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
              EA+SLF    +   I +D+    S+L+   S       K +H   +K+G      V 
Sbjct: 513 KLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGKQMHCHALKSGLITETGVG 572

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           NA + MY+K  N+D A  VFN M  +D++SW  L+ G   H   ++AL  +  M  +GI 
Sbjct: 573 NATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIK 632

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFL----KSGGCSSLSVDNSLVLVYAKCGCIND 490
           PD +  + I+SA    T L       ++F+    +     +L    S + V  + G + +
Sbjct: 633 PDSITFALIISAYKH-TELNLVDSCRSLFVSMETEHNIKPTLEHYASFISVLGRWGLLEE 691

Query: 491 ANRVFDSMHTR-DVITWTALIMGCAQNGKGK-EALQFYDQMLARGTKPDYITFVGLLFAC 548
           A +   +M    DV  W AL+  C  N   + E L   + +      P        L++ 
Sbjct: 692 AEQTIRNMPLEPDVYVWRALLNSCRINKNERLEKLAARNILAVEPKDPLSYILKSNLYSA 751

Query: 549 SHAGLAENARWYF 561
           S        RWY+
Sbjct: 752 S-------GRWYY 757



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 232/504 (46%), Gaps = 46/504 (9%)

Query: 90  FNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLL 149
           FN T    FFT    +   S          LF    L     +  +  ++LRL +  G  
Sbjct: 62  FNSTSPTQFFTSPQHLVSLSE--------PLFASRSLNTSLSTIASPFDLLRLSTRYGDP 113

Query: 150 QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
                 H   +K   + + F+   L+  Y K   + +A+ +F       N V++T +I+G
Sbjct: 114 DLARAVHAQFLK--LEEDIFLGNALISAYLKLGLVRDADKVFSGL-SCPNVVSYTALISG 170

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
           +S++ +  +A+E F  M   G+E N++TF +ILTAC        G+QVHG ++  G  + 
Sbjct: 171 FSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSC 230

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH- 328
           V++ +AL+ +Y KCG LD   RL E     +  SWN++I    ++  + EA   F+ M  
Sbjct: 231 VFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQL 290

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN-- 386
            + +K+D F+  ++L   A ++     + +H+L +K G E +  V+++LI  Y K G+  
Sbjct: 291 CKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSAN 350

Query: 387 -----------------------------LDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
                                        LD A  VFN M  ++ IS+ +++ G + +  
Sbjct: 351 DVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDD 410

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
              AL+ F +M   G+      ++SI++AC  L   +  QQ+    +K G  S+  ++ +
Sbjct: 411 GSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETA 470

Query: 478 LVLVYAKCGCINDANRVF--DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT- 534
           LV +Y +CG + DA ++F   S+        T++I G A+NGK  EA+  +    + G  
Sbjct: 471 LVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAI 530

Query: 535 KPDYITFVGLLFACSHAGLAENAR 558
             D +    +L  C   G  E  +
Sbjct: 531 VMDEVMSTSILSLCGSIGFHEMGK 554



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 192/394 (48%), Gaps = 47/394 (11%)

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
           D    VH   L    E ++++ +ALI  Y K G +  A ++       N VS+ ++I GF
Sbjct: 114 DLARAVHAQFLK--LEEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGF 171

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
           ++  +  EA+ LF  M    I+ +++T+ ++L     N+D      VH ++VK G     
Sbjct: 172 SKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCV 231

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI- 430
           F+ NAL+ +Y K G LD    +F  M ++D+ SW ++I+       Y+EA  YF  M++ 
Sbjct: 232 FICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLC 291

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
            G+  DH  +S++L+ACA       GQQ+HA+ LK G  S LSV +SL+  Y KCG  ND
Sbjct: 292 KGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSAND 351

Query: 491 ANRVFDSMHTRDVITWTALIM-------------------------------GCAQNGKG 519
              +F++M  RDVITWT +I                                G ++N  G
Sbjct: 352 VTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDG 411

Query: 520 KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPGPDHY 577
             AL+ + +ML  G +    T   ++ AC   GL ++    F+   ++ G  +K G    
Sbjct: 412 SRALELFIEMLEEGVEISDCTLTSIITAC---GLLKS----FKVSQQIQGFVMKFGILSN 464

Query: 578 AC----MIDLLGRSGKLIEAKALLDQMVGEPDAT 607
           +C    ++D+  R G++ +A+ +  Q   E D T
Sbjct: 465 SCIETALVDMYTRCGRMEDAEKIFYQRSLENDYT 498



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 184/378 (48%), Gaps = 16/378 (4%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++  G  ++   LFE M  RD  TW  MI +Y   G L  A ++FN+ P +N  ++++++
Sbjct: 343 YTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVL 402

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            G S       A ELF +M  EG   S  TL +++  C L    +  +Q  G+ +K    
Sbjct: 403 AGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGIL 462

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAW-TTMITGYSQNGYGFKAIECFR 224
            N+ + T LVDMY +C  + +AE +F       ++ A  T+MI GY++NG   +AI  F 
Sbjct: 463 SNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFH 522

Query: 225 DMRVEG-VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
             + EG +  ++    SIL+ C ++   + G Q+H   L SG      V +A + MY+KC
Sbjct: 523 SGQSEGAIVMDEVMSTSILSLCGSIGFHEMGKQMHCHALKSGLITETGVGNATVSMYSKC 582

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
            ++D A R+     + + VSWN ++ G        +AL ++KKM    IK D  T+  ++
Sbjct: 583 WNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALII 642

Query: 344 NCFASNIDLNNAKSVHSLIV--------KTGFEGYKFVNNALIDMYAKQGNLDCAFMVF- 394
           + +  + +LN   S  SL V        K   E Y     + I +  + G L+ A     
Sbjct: 643 SAY-KHTELNLVDSCRSLFVSMETEHNIKPTLEHYA----SFISVLGRWGLLEEAEQTIR 697

Query: 395 NLMQDKDVISWTSLITGC 412
           N+  + DV  W +L+  C
Sbjct: 698 NMPLEPDVYVWRALLNSC 715


>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
 gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 245/572 (42%), Positives = 358/572 (62%), Gaps = 5/572 (0%)

Query: 239 PSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI 298
           P ++ AC  +     G ++H  +L  GFE +V+V ++L+ MY++ G +  AR+L +    
Sbjct: 1   PPVVKACGDLLD---GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPA 57

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
            +  SWN+MI G+ + G   EAL +  +M    +K+D  T  SVL   A   D+ + K +
Sbjct: 58  RDRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLI 117

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           H  ++K G E   FV+NALI+MYAK G+L  A  VF L+  KDV+SW +LITG A +G  
Sbjct: 118 HLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLI-KDVVSWNTLITGYAQNGLA 176

Query: 419 EEALKYFSDMRI-SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
            EA++ +  M     I P+     SIL A + +  L+ G ++H   +K+   S + V   
Sbjct: 177 SEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTC 236

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
           L+ +Y KCG ++DA  +F  +  ++ + W A+I     +G G++AL+ + +M A   KPD
Sbjct: 237 LIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPD 296

Query: 538 YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALL 597
           +ITFV LL ACSH+GL  +A+W F  M++ YGIKP   HY CM+DL GR+G+L  A   +
Sbjct: 297 HITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFI 356

Query: 598 DQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWE 657
            +M  +PDA+ W ALL+ACR+HG++ELG+ A+  LFE++  N   YV LSN+Y+  GKWE
Sbjct: 357 KKMPIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWE 416

Query: 658 DAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAG 717
               VR L + RG+RK PG S +  N++V +F + ++ HP   +IY ++ ++   IK  G
Sbjct: 417 GVDDVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIKTIG 476

Query: 718 YVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMK 777
           YVPD  F L +VEE+ KE  L  HSE+LA+A+G+++     PIRIFKNLRVCGDCHT  K
Sbjct: 477 YVPDFCFVLQDVEEDEKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRVCGDCHTVTK 536

Query: 778 YISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +IS +  R II+RDS+RFHHFK G CSCGDYW
Sbjct: 537 FISIITEREIIVRDSSRFHHFKGGTCSCGDYW 568



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 199/365 (54%), Gaps = 18/365 (4%)

Query: 67  GFTWNTMIAA-----YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELF 121
           GF W+  +AA     Y+  G + +A+KLF++ P ++  +W+++I GY   G   EA ++ 
Sbjct: 24  GFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISGYCQNGNAAEALDIA 83

Query: 122 WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
            +M+LEG +    T+ +VL +C+  G +  G+  H Y IK   +   FV   L++MYAK 
Sbjct: 84  DEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKF 143

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV-EGVESNQFTFPS 240
             +  A+ +F +    K+ V+W T+ITGY+QNG   +AIE +  M   E +  NQ T+ S
Sbjct: 144 GSLGHAQKVFGLLI--KDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVS 201

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           IL A + V A   G ++HG ++ +   ++V+V + LIDMY KCG LD A  L       N
Sbjct: 202 ILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKN 261

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
            V WN+MI  +   G  ++AL LF++M A  +K D  T+ S+L+  + +  +++A+   +
Sbjct: 262 SVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFN 321

Query: 361 LI-----VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAY 414
           ++     +K   + Y      ++D++ + G L+ AF     M    D  +W +L+  C  
Sbjct: 322 MMEEEYGIKPSLKHY----GCMVDLFGRAGELEMAFNFIKKMPIQPDASAWGALLNACRI 377

Query: 415 HGSYE 419
           HG+ E
Sbjct: 378 HGNIE 382



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 9/164 (5%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           GQ+ +     D F    +I  Y   G+L +A  LF + P KN   W+++I  Y  +G   
Sbjct: 220 GQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGE 279

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE-----QFHGYAIKTCFDLNAFV 170
           +A ELF +M+ E  +P   T  ++L  CS  GL+   +         Y IK         
Sbjct: 280 KALELFREMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGC- 338

Query: 171 VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
              +VD++ +   +  A    K  P   +  AW  ++     +G
Sbjct: 339 ---MVDLFGRAGELEMAFNFIKKMPIQPDASAWGALLNACRIHG 379



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 6/96 (6%)

Query: 43  LVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK----N 97
           L+D +   G++D+A  LF ++  ++   WN MI+ Y   G   +A +LF E   +    +
Sbjct: 237 LIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPD 296

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPS 132
             T+ SL+   S+ GL  +A   F  M+ E G +PS
Sbjct: 297 HITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPS 332


>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Vitis vinifera]
          Length = 629

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 234/612 (38%), Positives = 368/612 (60%), Gaps = 9/612 (1%)

Query: 202 AWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI 261
           +W   +   ++  +  +A+  +  M   G   N FTFP    +CA++S    G+Q+HG +
Sbjct: 23  SWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHV 82

Query: 262 LSSGFEANVYVQSALIDMYAKCGDLDSARRLLE--YSEIDNEVSWNSMIVGFARQGFHKE 319
           + +G E   +VQ++LI MY KC  + SAR++ +  +   +  V +N++I G++      +
Sbjct: 83  IKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSD 142

Query: 320 ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALID 379
           A+ LF++M    + ++  T   ++   A  I L    S+H+  V+ G +G   V N L+ 
Sbjct: 143 AVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLT 202

Query: 380 MYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVV 439
           MY + G++D A  +F+ M +K +I+W ++I+G A +G     L  +  M  +GI PD V 
Sbjct: 203 MYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVT 262

Query: 440 VSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH 499
           +  +LS+CA L     G++V      SG   +  + N+L+ +YA+CG +  A  +FD M 
Sbjct: 263 LVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMT 322

Query: 500 TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW 559
            ++VI+WTA+I G   +G+G+ A+Q +D+M++    PD   FV +L ACSHAGL E   +
Sbjct: 323 EKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLY 382

Query: 560 YFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVH 619
           YF +M++ YG++PGP+HY+C++DLLGR+G+L EA+ L+  M  EPD  VW ALL AC++H
Sbjct: 383 YFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIH 442

Query: 620 GDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSW 679
            ++EL E A   + E EP N   YV LSN++S AG  E   RVR +M+ R ++KEPGCS+
Sbjct: 443 RNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKEPGCSY 502

Query: 680 VETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEI--G 737
           VE   ++H+F++ DR HP   +IY  +D +  +IK  G   D     ++ E   +E+  G
Sbjct: 503 VEYQGRIHLFLAGDRTHPQAQEIYHMLDGLEDIIKRRGGSND-----NDQESRNEELITG 557

Query: 738 LAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHH 797
           +  HSEKLA+AFGL+    G  I + KNLRVCGDCH  +K +S +  R +++RD+ RFHH
Sbjct: 558 MGVHSEKLAIAFGLINTEPGTEITVIKNLRVCGDCHLFLKLVSEIVDRQLVVRDATRFHH 617

Query: 798 FKAGNCSCGDYW 809
           FK G CSC DYW
Sbjct: 618 FKNGVCSCKDYW 629



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/401 (33%), Positives = 193/401 (48%), Gaps = 3/401 (0%)

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  L+ QM   G  P+ +T     + C+   L   G Q HG+ IKT  +   FV T L+
Sbjct: 39  EALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHVIKTGCEPEPFVQTSLI 98

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKN-HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
            MY KC  I  A  +F      +N  V +  +I GYS N     A+  FR MR EGV  N
Sbjct: 99  SMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVSVN 158

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
             T   ++  CA      FG  +H C +  G + ++ V + L+ MY +CG +D AR+L +
Sbjct: 159 AVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFARKLFD 218

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
                  ++WN+MI G+A+ G     L L++KM    I  D  T   VL+  A       
Sbjct: 219 GMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAA 278

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
            + V   I  +GF    F+ NALI+MYA+ GNL  A  +F+ M +K+VISWT++I G   
Sbjct: 279 GREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGM 338

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
           HG  E A++ F +M  S   PD     S+LSAC+   + E G        +  G      
Sbjct: 339 HGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPE 398

Query: 475 DNSLVL-VYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
             S V+ +  + G + +A ++  SM    D   W AL+  C
Sbjct: 399 HYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGAC 439



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 177/370 (47%), Gaps = 5/370 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT--WSSLIYGYSNYGL 113
           G + +   + + F   ++I+ Y     +  A+K+F+E          +++LI GYS    
Sbjct: 80  GHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSR 139

Query: 114 DIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG 173
             +A  LF QM+ EG   +  T+  ++ +C+    L  G   H  +++   D +  V   
Sbjct: 140 FSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNC 199

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
           L+ MY +C  +  A  LF   P+ K  + W  MI+GY+QNG     ++ +R M   G+  
Sbjct: 200 LLTMYVRCGSVDFARKLFDGMPE-KGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVP 258

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
           +  T   +L++CA + A   G +V   I  SGF  N ++++ALI+MYA+CG+L  AR + 
Sbjct: 259 DPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIF 318

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDL 352
           +     N +SW ++I G+   G  + A+ LF +M + D   D   + SVL+ C  + +  
Sbjct: 319 DGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTE 378

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITG 411
                  ++    G +      + ++D+  + G L+ A  +   M  + D   W +L+  
Sbjct: 379 KGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGA 438

Query: 412 CAYHGSYEEA 421
           C  H + E A
Sbjct: 439 CKIHRNVELA 448



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/376 (21%), Positives = 154/376 (40%), Gaps = 72/376 (19%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  L  +   G +D A +LF+ M ++   TWN MI+                        
Sbjct: 198 NCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMIS------------------------ 233

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
                  GY+  GL     +L+ +M+  G  P   TL  VL  C+  G    G +     
Sbjct: 234 -------GYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRI 286

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
             + F  N F+   L++MYA+C  + +A  +F    + KN ++WT +I GY  +G G  A
Sbjct: 287 ELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTE-KNVISWTAIIAGYGMHGQGELA 345

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALID 278
           ++ F +M       +   F S+L+AC+     + G      +    G +      S ++D
Sbjct: 346 VQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVD 405

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
           +  + G L+ AR+L+    ++ + +    ++G               K+H R++++ +  
Sbjct: 406 LLGRAGRLEEARKLIGSMSVEPDGAVWGALLGAC-------------KIH-RNVELAELA 451

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
           +  V+    +NI                  GY  +   L +++++ GN++    V  +M+
Sbjct: 452 FEKVIEFEPTNI------------------GYYVL---LSNIFSEAGNMEGILRVRVMMR 490

Query: 399 DKDVISWTSLITGCAY 414
           ++ +        GC+Y
Sbjct: 491 ERKLKKE----PGCSY 502


>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
 gi|219885099|gb|ACL52924.1| unknown [Zea mays]
          Length = 530

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 229/531 (43%), Positives = 339/531 (63%), Gaps = 1/531 (0%)

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
           MY KCG +  AR + +     + VSW  +I G+A+     EA+ L   M     + + FT
Sbjct: 1   MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
           + S+L    +    +  + +H+L VK  ++   +V +AL+DMYA+   +D A MVF+ + 
Sbjct: 61  FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
            K+ +SW +LI G A     E  L  F++M+ +G    H   SS+ SA A +  LE G+ 
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK 518
           VHA  +KSG   +  V N+++ +YAK G + DA +VFD M  RD++TW  ++   AQ G 
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGL 240

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA 578
           GKEA+  ++++   G + + ITF+ +L ACSH GL +  + YF+ M K Y ++P  DHY 
Sbjct: 241 GKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMM-KDYNVQPEIDHYV 299

Query: 579 CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM 638
             +DLLGR+G L EA   + +M  EP A VW ALL ACR+H + ++G+ AA+++FEL+P 
Sbjct: 300 SFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPD 359

Query: 639 NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPL 698
           +  P V L N+Y++ GKW DAARVRK+MK+ G++KEP CSWV+  + VH+F+++D  HP 
Sbjct: 360 DTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPK 419

Query: 699 RTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA 758
             DIY   +EI + IK+AGYVP+    L ++ E+ +E  L YHSEK+A+AF L+ +P GA
Sbjct: 420 SGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGA 479

Query: 759 PIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            IRI KN+R+CGDCH+A KY+S V+ R I++RD+NRFHHF  G+CSCGDYW
Sbjct: 480 SIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 530



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 191/399 (47%), Gaps = 4/399 (1%)

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           MY KC  + +A ++F   P  ++ V+WT +I GY+QN    +AI    DM       N F
Sbjct: 1   MYCKCGAVSDARHVFDKMPS-RDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGF 59

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           TF S+L A  A      G Q+H   +   ++ +VYV SAL+DMYA+C  +D A  + +  
Sbjct: 60  TFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRL 119

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              NEVSWN++I GFAR+   +  L  F +M         FTY S+ + FA    L   +
Sbjct: 120 VSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGR 179

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            VH+ ++K+G +   FV N ++ MYAK G++  A  VF+ M  +D+++W +++T  A +G
Sbjct: 180 WVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYG 239

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
             +EA+ +F ++R  GI  + +   S+L+AC+   +++ G+    +         +    
Sbjct: 240 LGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYV 299

Query: 477 SLVLVYAKCGCINDA-NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           S V +  + G + +A   VF          W AL+  C  +   K      D +      
Sbjct: 300 SFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFE--LD 357

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
           PD      LL+    +    N       M K  G+K  P
Sbjct: 358 PDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEP 396



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 172/340 (50%), Gaps = 2/340 (0%)

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
           Y   G + +A+ +F++ P ++  +W+ LI GY+   +  EA  L   M    +RP+ +T 
Sbjct: 2   YCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTF 61

Query: 137 DNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD 196
            ++L+     G    GEQ H  A+K  +D + +V + L+DMYA+C+ +  A  +F     
Sbjct: 62  TSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVS 121

Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
            KN V+W  +I G+++   G   +  F +M+  G  +  FT+ S+ +A A + A + G  
Sbjct: 122 -KNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           VH  ++ SG +   +V + ++ MYAK G +  AR++ +  +  + V+WN+M+   A+ G 
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGL 240

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
            KEA++ F+++    I+++  T+ SVL   +    +   K    ++     +       +
Sbjct: 241 GKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVS 300

Query: 377 LIDMYAKQGNLDCAFM-VFNLMQDKDVISWTSLITGCAYH 415
            +D+  + G L  A + VF +  +     W +L+  C  H
Sbjct: 301 FVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMH 340



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 142/307 (46%), Gaps = 5/307 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D +  + ++  YA   ++  A  +F+    KN  +W++LI G++           F +
Sbjct: 90  DEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAE 149

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           MQ  G+  + +T  ++    +  G L++G   H + IK+   L AFV   ++ MYAK   
Sbjct: 150 MQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGS 209

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A  +F    D ++ V W TM+T  +Q G G +A+  F ++R  G++ NQ TF S+LT
Sbjct: 210 MVDARKVFDRM-DKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLT 268

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC+       G      +     +  +    + +D+  + G L  A   +    ++   +
Sbjct: 269 ACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAA 328

Query: 304 WNSMIVGFARQGFHKEA-LSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSL 361
               ++G  R   HK A +  +   H  ++  DD   P +L N +AS    N+A  V  +
Sbjct: 329 VWGALLGACR--MHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKM 386

Query: 362 IVKTGFE 368
           +  TG +
Sbjct: 387 MKATGVK 393



 Score = 46.6 bits (109), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 18/199 (9%)

Query: 11  FSLRCRSKIIGPARYTHNVGNSVKPASDL-----NRALVDFSNSGEIDEAGQLFEKMSDR 65
           FS   R   +   R+ H   + +K    L     N  L  ++ SG + +A ++F++M  R
Sbjct: 166 FSAFARIGALEQGRWVH--AHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKR 223

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPF----KNFFTWSSLIYGYSNYGLDIEAFELF 121
           D  TWNTM+ A A  G  +EA   F E        N  T+ S++   S+ GL  E    F
Sbjct: 224 DLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYF 283

Query: 122 WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV---VTGLVDMY 178
             M+    +P      + + L    GLL+    F     K   +  A V   + G   M+
Sbjct: 284 DMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIF---VFKMPMEPTAAVWGALLGACRMH 340

Query: 179 AKCKC-IFEAEYLFKMFPD 196
              K   + A+++F++ PD
Sbjct: 341 KNAKMGQYAADHVFELDPD 359


>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Glycine max]
          Length = 676

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 253/673 (37%), Positives = 375/673 (55%), Gaps = 4/673 (0%)

Query: 140 LRLCSLKGL--LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           L+ C   GL  L + +Q H   ++     + +++  L+           A  +F   P  
Sbjct: 5   LKKCFAWGLKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPH- 63

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR-DFGAQ 256
            N   + T+I G   N     A+  +  MR  G   + FTFP +L AC  +      G  
Sbjct: 64  PNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLS 123

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           +H  ++ +GF+ +V+V++ L+ +Y+K G L  AR++ +     N VSW ++I G+   G 
Sbjct: 124 LHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGC 183

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
             EAL LF+ +    ++ D FT   +L   +   DL + + +   + ++G  G  FV  +
Sbjct: 184 FGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATS 243

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           L+DMYAK G+++ A  VF+ M +KDV+ W++LI G A +G  +EAL  F +M+   + PD
Sbjct: 244 LVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPD 303

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFD 496
              +  + SAC+ L  LE G     +       S+  +  +L+  YAKCG +  A  VF 
Sbjct: 304 CYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFK 363

Query: 497 SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAEN 556
            M  +D + + A+I G A  G    A   + QM+  G +PD  TFVGLL  C+HAGL ++
Sbjct: 364 GMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDD 423

Query: 557 ARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSAC 616
              YF  M  V+ + P  +HY CM+DL  R+G L+EA+ L+  M  E ++ VW ALL  C
Sbjct: 424 GHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGC 483

Query: 617 RVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPG 676
           R+H D +L E     L ELEP N+  YV LSN+YS + +W++A ++R  +  +G++K PG
Sbjct: 484 RLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPG 543

Query: 677 CSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEI 736
           CSWVE +  VH F+  D  HPL   IY K++ +   ++EAGY P   F L +VEEE KE 
Sbjct: 544 CSWVEVDGVVHEFLVGDTSHPLSHKIYEKLESLFKDLREAGYNPTTEFVLFDVEEEEKEY 603

Query: 737 GLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFH 796
            L  HSEKLAVAF L++      IR+ KNLRVCGDCH A+K +S V  R II+RD+NRFH
Sbjct: 604 FLGCHSEKLAVAFALISTGAKDVIRVVKNLRVCGDCHEAIKLVSKVTGREIIVRDNNRFH 663

Query: 797 HFKAGNCSCGDYW 809
           HF  G+CSC DYW
Sbjct: 664 HFTEGSCSCRDYW 676



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 141/474 (29%), Positives = 230/474 (48%), Gaps = 14/474 (2%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           +D +  N ++ +  +    + A  +F +TP  N F +++LI G  +     +A  ++  M
Sbjct: 33  QDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVYASM 92

Query: 125 QLEGYRPSQYTLDNVLRLCS-LKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           +  G+ P  +T   VL+ C+ L      G   H   IKT FD + FV TGLV +Y+K   
Sbjct: 93  RQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGF 152

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A  +F   P+ KN V+WT +I GY ++G   +A+  FR +   G+  + FT   IL 
Sbjct: 153 LTDARKVFDEIPE-KNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILY 211

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC+ V     G  + G +  SG   NV+V ++L+DMYAKCG ++ ARR+ +     + V 
Sbjct: 212 ACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVC 271

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           W+++I G+A  G  KEAL +F +M   +++ D +    V +  +    L        L+ 
Sbjct: 272 WSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMD 331

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
              F     +  ALID YAK G++  A  VF  M+ KD + + ++I+G A  G    A  
Sbjct: 332 GDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFG 391

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS------ 477
            F  M   G+ PD      +L  C    +++ G   H  F  SG  S  SV  +      
Sbjct: 392 VFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDG---HRYF--SGMSSVFSVTPTIEHYGC 446

Query: 478 LVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQML 530
           +V + A+ G + +A  +  SM    + I W AL+ GC  +   + A     Q++
Sbjct: 447 MVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLI 500



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 144/304 (47%), Gaps = 12/304 (3%)

Query: 15  CRSKIIGPARYTHNVGNSVKPAS-DLNRALVDFSNSGEIDEA----GQLFEKMSDRDGFT 69
           C  + +G  R    +G  ++P S  L R L   S  G++       G + E  S  + F 
Sbjct: 183 CFGEALGLFRGLLEMG--LRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFV 240

Query: 70  WNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGY 129
             +++  YA  G + EA+++F+    K+   WS+LI GY++ G+  EA ++F++MQ E  
Sbjct: 241 ATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENV 300

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           RP  Y +  V   CS  G L+ G    G      F  N  + T L+D YAKC  + +A+ 
Sbjct: 301 RPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKE 360

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +FK     K+ V +  +I+G +  G+   A   F  M   G++ +  TF  +L  C    
Sbjct: 361 VFKGMRR-KDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAG 419

Query: 250 ARDFGAQVHGCILSSGFEANVYVQ--SALIDMYAKCGDLDSARRLLEYSEID-NEVSWNS 306
             D G +     +SS F     ++    ++D+ A+ G L  A+ L+    ++ N + W +
Sbjct: 420 LVDDGHRYFSG-MSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGA 478

Query: 307 MIVG 310
           ++ G
Sbjct: 479 LLGG 482


>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
 gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
          Length = 897

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 237/673 (35%), Positives = 392/673 (58%), Gaps = 1/673 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D  T + ++  YA   RL ++  +F+E P KN+ +WS++I G      ++E  ELF +
Sbjct: 213 DCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKE 272

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           MQ  G   SQ    ++ R C+    L+ G++ H +A+K+ F  +  V T  +DMYAKC  
Sbjct: 273 MQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGR 332

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A+ +    P      ++  +I GY+++  GF+A++ F+ +   G+  ++ T    L 
Sbjct: 333 MADAQKVLSSMPKCSLQ-SYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALN 391

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           ACA++     G QVHG  + S   +N+ V +A++DMY KC  L  A  L +  E  + VS
Sbjct: 392 ACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVS 451

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN++I    + G  +E L+ F  M    ++ DDFTY SVL   A    LN    +H+ I+
Sbjct: 452 WNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRII 511

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K+G     FV  AL+DMY K G ++ A  + +  + K ++SW ++I+G +     E+A K
Sbjct: 512 KSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHK 571

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
           +FS M   G+ PD+   +++L  CA L  +  G+Q+HA  +K    S + + ++LV +Y+
Sbjct: 572 FFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYS 631

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG + D+  +F+    RD +TW A++ G A +G G+EAL+ ++ M     KP++ TFV 
Sbjct: 632 KCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVS 691

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           +L AC+H GL +    YF+ M   YG+ P  +HY+CM+D+LGRSG++ EA  L+ +M  E
Sbjct: 692 VLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFE 751

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
            DA +W+ LLS C++HG++E+ E+A   L +L+P ++   V LSN+Y+ AG W + + +R
Sbjct: 752 ADAVIWRNLLSVCKIHGNVEVAEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMR 811

Query: 664 KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMN 723
           K+M+   ++KEPGCSW+E   +VH F+  D+GHP   +IY K+  ++  ++  GY+PD +
Sbjct: 812 KMMRHNKLKKEPGCSWIELKDEVHAFLVGDKGHPRDEEIYEKLGVLIGEMQSVGYIPDCD 871

Query: 724 FALHNVEEEGKEI 736
             L    EE  ++
Sbjct: 872 VLLDEEVEEPAQL 884



 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 181/593 (30%), Positives = 309/593 (52%), Gaps = 10/593 (1%)

Query: 52  IDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNY 111
           +D A ++F+KM  RD  ++N++I+ YA+ G +  A+K F E P ++  +W+S+I G+   
Sbjct: 100 LDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQN 159

Query: 112 GLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV 171
           G   ++ ++F +M   G    + +L  VL+ C        G Q HG  +K  FD +    
Sbjct: 160 GECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTG 219

Query: 172 TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV 231
           + L+ MYAKCK + ++  +F   P+ KN V+W+ MI G  QN    + +E F++M+  GV
Sbjct: 220 SALLGMYAKCKRLDDSLSVFSELPE-KNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGV 278

Query: 232 ESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR 291
             +Q  + S+  +CAA+SA   G ++H   L S F +++ V +A +DMYAKCG +  A++
Sbjct: 279 GVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQK 338

Query: 292 LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID 351
           +L      +  S+N++IVG+AR     +AL  F+ +    +  D+ T    LN  AS   
Sbjct: 339 VLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRG 398

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
               + VH L VK+       V NA++DMY K   L  A  +F++M+ +D +SW ++I  
Sbjct: 399 DLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAA 458

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
           C  +G+ EE L +F+ M  S + PD     S+L ACA    L  G ++H   +KSG    
Sbjct: 459 CEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFD 518

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
             V  +LV +Y KCG I  A+++ D    + +++W A+I G +   + ++A +F+ +ML 
Sbjct: 519 SFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLE 578

Query: 532 RGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC--MIDLLGRSGK 589
            G  PD  T+  +L  C++       +     + K    +   D Y C  ++D+  + G 
Sbjct: 579 MGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQ---ELQSDVYICSTLVDMYSKCGN 635

Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           + +++ + ++     D   W A+L     HG   LGE A      ++ +N  P
Sbjct: 636 MQDSQLMFEKAPNR-DFVTWNAMLCGYAHHG---LGEEALKLFESMQLVNVKP 684



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 153/519 (29%), Positives = 250/519 (48%), Gaps = 48/519 (9%)

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC-----KC-IFEAE 188
           T  ++ + CS +  L  G+Q H   I   F+   FV   L+ MY KC      C +F+  
Sbjct: 51  TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110

Query: 189 YL-------------------------FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
           YL                         F   P+ ++ V+W ++I+G+ QNG   K+I+ F
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPE-RDVVSWNSVISGFLQNGECRKSIDVF 169

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
            +M   GV  ++ +   +L AC A+   D G QVHG ++  GF+ +V   SAL+ MYAKC
Sbjct: 170 LEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKC 229

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
             LD +  +       N VSW++MI G  +   + E L LFK+M    + +    Y S+ 
Sbjct: 230 KRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLF 289

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVI 403
              A+   L   K +HS  +K+ F     V  A +DMYAK G +  A  V + M    + 
Sbjct: 290 RSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQ 349

Query: 404 SWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVF 463
           S+ ++I G A      +ALK F  +  +G+  D + +S  L+ACA +     G+QVH + 
Sbjct: 350 SYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLA 409

Query: 464 LKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEAL 523
           +KS   S++ V N+++ +Y KC  + +A+ +FD M  RD ++W A+I  C QNG  +E L
Sbjct: 410 VKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETL 469

Query: 524 QFYDQMLARGTKPDYITFVGLLFACS-----HAGLAENARWYFESMDKVYGIKPGPDHY- 577
             +  M+    +PD  T+  +L AC+     + G+  + R     M        G D + 
Sbjct: 470 AHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGM--------GFDSFV 521

Query: 578 -ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
            A ++D+  + G + +A  + D+   +     W A++S 
Sbjct: 522 GAALVDMYCKCGMIEKADKIHDR-TEQKTMVSWNAIISG 559



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 83/154 (53%), Gaps = 1/154 (0%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            Q+ ++    D +  +T++  Y+  G +++++ +F + P ++F TW++++ GY+++GL  
Sbjct: 609 AQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGE 668

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT-CFDLNAFVVTGL 174
           EA +LF  MQL   +P+  T  +VLR C+  GL+ +G  +    +     D  +   + +
Sbjct: 669 EALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCM 728

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
           VD+  +   I EA  L +  P   + V W  +++
Sbjct: 729 VDILGRSGRIDEALNLVQKMPFEADAVIWRNLLS 762


>gi|449482566|ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 266/783 (33%), Positives = 416/783 (53%), Gaps = 38/783 (4%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           + D F  N +I+AY   G +R+A K+F+     N  ++++LI G+S    + EA ELF+ 
Sbjct: 127 EEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFA 186

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M   G  P++YT   +L  C      Q G Q HG  +K       F+   L+ +Y KC  
Sbjct: 187 MLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGF 246

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV-EGVESNQFTFPSIL 242
           +     LF+  P+ ++  +W T+I+   +     +A + FR M++ +G++ + F+  ++L
Sbjct: 247 LDLVLRLFEEMPE-RDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLL 305

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           TACA       G Q+H   L  G E+++ V S+LI  Y KCG  +    L E   I + +
Sbjct: 306 TACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVI 365

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARD------------------------------- 331
           +W  MI  +   G    A+ +F KM  R+                               
Sbjct: 366 TWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEG 425

Query: 332 IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
           ++I D T  S++           ++ +   ++K G      +  AL+DMY + G ++ A 
Sbjct: 426 VEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAE 485

Query: 392 MVF--NLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG-ICPDHVVVSSILSACA 448
            +F    +++      TS+I G A +G   EA+  F   +  G I  D V+ +SILS C 
Sbjct: 486 KIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCG 545

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
            +   E G Q+H   LKSG  +   V N+ V +Y+KC  ++DA RVF++M+ +D+++W  
Sbjct: 546 SIGFHEMGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNG 605

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA--GLAENARWYFESMDK 566
           L+ G   + +G +AL  + +M   G KPD ITF  ++ A  H    L ++ R  F SM+ 
Sbjct: 606 LVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMET 665

Query: 567 VYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGE 626
            + IKP  +HYA  I +LGR G L EA+  +  M  EPD  VW+ALL++CR++ +  L +
Sbjct: 666 EHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEK 725

Query: 627 RAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQV 686
            AA N+  +EP + + Y+  SN+YS +G+W  + +VR+ M+ +G RK P  SW+   +++
Sbjct: 726 LAARNILAVEPKDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWIIHENKI 785

Query: 687 HIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLA 746
           H F + DR HP   DIYS ++ ++L   + GYVPD +F L  VEE  K+  L YHS KLA
Sbjct: 786 HSFYARDRSHPQGKDIYSGLEILILECLKVGYVPDTSFVLQEVEERQKKEFLFYHSGKLA 845

Query: 747 VAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCG 806
             FG+L    G PI+I KN+R+CGDCH  +KY+S V  R I+LRD++ FH F  G CSC 
Sbjct: 846 ATFGILMTKPGKPIQIVKNVRLCGDCHNFLKYVSIVTRRKILLRDTSGFHWFIDGQCSCT 905

Query: 807 DYW 809
           DYW
Sbjct: 906 DYW 908



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 133/501 (26%), Positives = 231/501 (46%), Gaps = 46/501 (9%)

Query: 90  FNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLL 149
           FN T    FFT    +   S          LF    L     +  +  ++LRL +  G  
Sbjct: 62  FNSTSPTQFFTSPQHLVSLSE--------PLFASRSLNTSLSTIASPFDLLRLSTRYGDP 113

Query: 150 QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
                 H   +K   + + F+   L+  Y K   + +A+ +F       N V++T +I+G
Sbjct: 114 DLARAVHAQFLK--LEEDIFLGNALISAYLKLGLVRDADKVFSGL-SCPNVVSYTALISG 170

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
           +S++ +  +A+E F  M   G+E N++TF +ILTAC        G+QVHG ++  G  + 
Sbjct: 171 FSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSC 230

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH- 328
           V++ +AL+ +Y KCG LD   RL E     +  SWN++I    ++  + EA   F+ M  
Sbjct: 231 VFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQL 290

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN-- 386
            + +K+D F+  ++L   A ++     + +H+L +K G E +  V+++LI  Y K G+  
Sbjct: 291 CKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSAN 350

Query: 387 -----------------------------LDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
                                        LD A  VFN M  ++ IS+ +++ G + +  
Sbjct: 351 DVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDD 410

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
              AL+ F +M   G+      ++SI++AC  L   +  QQ+    +K G  S+  ++ +
Sbjct: 411 GSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETA 470

Query: 478 LVLVYAKCGCINDANRVF--DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT- 534
           LV +Y +CG + DA ++F   S+        T++I G A+NGK  EA+  +    + G  
Sbjct: 471 LVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAI 530

Query: 535 KPDYITFVGLLFACSHAGLAE 555
             D +    +L  C   G  E
Sbjct: 531 VMDEVMSTSILSLCGSIGFHE 551



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 147/553 (26%), Positives = 242/553 (43%), Gaps = 81/553 (14%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS 109
           G +D   +LFE+M +RD  +WNT+I++            L  E  +              
Sbjct: 245 GFLDLVLRLFEEMPERDITSWNTVISS------------LVKEFKYD------------- 279

Query: 110 NYGLDIEAFELFWQMQL-EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA 168
                 EAF+ F  MQL +G +   ++L  +L  C+      +G+Q H  A+K   + + 
Sbjct: 280 ------EAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHL 333

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY------------------ 210
            V + L+  Y KC    +   LF+  P  ++ + WT MIT Y                  
Sbjct: 334 SVSSSLIGFYTKCGSANDVTDLFETMPI-RDVITWTGMITSYMEFGMLDSAVEVFNKMPK 392

Query: 211 -------------SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
                        S+N  G +A+E F +M  EGVE +  T  SI+TAC  + +     Q+
Sbjct: 393 RNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQI 452

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS--WNSMIVGFARQG 315
            G ++  G  +N  +++AL+DMY +CG ++ A ++     ++N+ +    SMI G+AR G
Sbjct: 453 QGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNG 512

Query: 316 FHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
              EA+SLF    +   I +D+    S+L+   S         +H   +K+G      V 
Sbjct: 513 KLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGMQMHCHALKSGLITETGVG 572

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           NA + MY+K  N+D A  VFN M  +D++SW  L+ G   H   ++AL  +  M  +GI 
Sbjct: 573 NATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIK 632

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFL----KSGGCSSLSVDNSLVLVYAKCGCIND 490
           PD +  + I+SA    T L       ++F+    +     +L    S + V  + G + +
Sbjct: 633 PDSITFALIISAYKH-TELNLVDSCRSLFVSMETEHNIKPTLEHYASFISVLGRWGLLEE 691

Query: 491 ANRVFDSMHTR-DVITWTALIMGCAQNGKGK-EALQFYDQMLARGTKPDYITFVGLLFAC 548
           A +   +M    DV  W AL+  C  N   + E L   + +      P        L++ 
Sbjct: 692 AEQTIRNMPLEPDVYVWRALLNSCRINKNERLEKLAARNILAVEPKDPLSYILKSNLYSA 751

Query: 549 SHAGLAENARWYF 561
           S        RWY+
Sbjct: 752 S-------GRWYY 757



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 192/394 (48%), Gaps = 47/394 (11%)

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
           D    VH   L    E ++++ +ALI  Y K G +  A ++       N VS+ ++I GF
Sbjct: 114 DLARAVHAQFLK--LEEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGF 171

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
           ++  +  EA+ LF  M    I+ +++T+ ++L     N+D      VH ++VK G     
Sbjct: 172 SKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCV 231

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI- 430
           F+ NAL+ +Y K G LD    +F  M ++D+ SW ++I+       Y+EA  YF  M++ 
Sbjct: 232 FICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLC 291

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
            G+  DH  +S++L+ACA       GQQ+HA+ LK G  S LSV +SL+  Y KCG  ND
Sbjct: 292 KGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSAND 351

Query: 491 ANRVFDSMHTRDVITWTALIM-------------------------------GCAQNGKG 519
              +F++M  RDVITWT +I                                G ++N  G
Sbjct: 352 VTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDG 411

Query: 520 KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPGPDHY 577
             AL+ + +ML  G +    T   ++ AC   GL ++    F+   ++ G  +K G    
Sbjct: 412 SRALELFIEMLEEGVEISDCTLTSIITAC---GLLKS----FKVSQQIQGFVMKFGILSN 464

Query: 578 AC----MIDLLGRSGKLIEAKALLDQMVGEPDAT 607
           +C    ++D+  R G++ +A+ +  Q   E D T
Sbjct: 465 SCIETALVDMYTRCGRMEDAEKIFYQRSLENDYT 498



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 184/378 (48%), Gaps = 16/378 (4%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++  G  ++   LFE M  RD  TW  MI +Y   G L  A ++FN+ P +N  ++++++
Sbjct: 343 YTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVL 402

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            G S       A ELF +M  EG   S  TL +++  C L    +  +Q  G+ +K    
Sbjct: 403 AGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGIL 462

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAW-TTMITGYSQNGYGFKAIECFR 224
            N+ + T LVDMY +C  + +AE +F       ++ A  T+MI GY++NG   +AI  F 
Sbjct: 463 SNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFH 522

Query: 225 DMRVEG-VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
             + EG +  ++    SIL+ C ++   + G Q+H   L SG      V +A + MY+KC
Sbjct: 523 SGQSEGAIVMDEVMSTSILSLCGSIGFHEMGMQMHCHALKSGLITETGVGNATVSMYSKC 582

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
            ++D A R+     + + VSWN ++ G        +AL ++KKM    IK D  T+  ++
Sbjct: 583 WNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALII 642

Query: 344 NCFASNIDLNNAKSVHSLIV--------KTGFEGYKFVNNALIDMYAKQGNLDCAFMVF- 394
           + +  + +LN   S  SL V        K   E Y     + I +  + G L+ A     
Sbjct: 643 SAY-KHTELNLVDSCRSLFVSMETEHNIKPTLEHYA----SFISVLGRWGLLEEAEQTIR 697

Query: 395 NLMQDKDVISWTSLITGC 412
           N+  + DV  W +L+  C
Sbjct: 698 NMPLEPDVYVWRALLNSC 715


>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
 gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 244/665 (36%), Positives = 394/665 (59%), Gaps = 4/665 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GY 129
           N ++     +G L  A++LF++   ++  +W+++I GY N     EA  LF +M +E G 
Sbjct: 5   NLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGL 64

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
               + L   L+ C L   +  GE  HGY++KT F  + FV + LVDMY K   + E   
Sbjct: 65  HMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCI 124

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +FK  P  +N V+WT +I G  + GY  +A+  F DM ++ V  + +TF S L ACA   
Sbjct: 125 VFKEMPL-RNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSG 183

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
           A ++G ++H   L  GF A  +V + L  MY KCG LD   RL E     + VSW ++I+
Sbjct: 184 ALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIM 243

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
              + G  + A+  F++M   D+  ++FT+ +V++  A+   +   + +H+ +++ G   
Sbjct: 244 SNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVD 303

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
              V N+++ MY+K   LD A  VF  +  +D+ISW+++I+G A  G  EEA  Y S MR
Sbjct: 304 SLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMR 363

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
             G  P+    +S+LS C  + +LE G+Q+HA  L  G   +  V ++L+ +Y+KCG I 
Sbjct: 364 REGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIK 423

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
           +A+++FD     ++++WTA+I G A++G  +EA+  + ++   G +PD +TF+ +L ACS
Sbjct: 424 EASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACS 483

Query: 550 HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
           HAGL +    YF S+ KV+ I P  DHY CMIDLL R+G+L +A++++  M  + D  VW
Sbjct: 484 HAGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVW 543

Query: 610 KALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
             LL ACR+HGD++ G+RAA  + +L+P  A+ ++ L+NMY+  GKW++AA VRK+MKS+
Sbjct: 544 STLLRACRIHGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKEAAEVRKMMKSK 603

Query: 670 GIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNV 729
           G+ KEPG SW++   +V  F+S DR HP    IY  +D  +L  +   ++ +M+F L+ V
Sbjct: 604 GVVKEPGWSWIKFKDRVSAFVSGDRSHPEGEYIYDVLD--LLASQAEMHMQEMDFLLNEV 661

Query: 730 EEEGK 734
           +E  +
Sbjct: 662 QESQR 666



 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 133/470 (28%), Positives = 237/470 (50%), Gaps = 22/470 (4%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  + ++  Y   G++ E   +F E P +N  +W+++I G    G + EA   F  M ++
Sbjct: 104 FVGSALVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQ 163

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
                 YT  + L+ C+  G L  G + H   +K  F   +FV   L  MY KC    + 
Sbjct: 164 KVGCDTYTFSSALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCG---KL 220

Query: 188 EYLFKMFPD--GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +Y  ++F     ++ V+WTT+I    Q G    A++ FR MR   V  N+FTF ++++ C
Sbjct: 221 DYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGC 280

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A +   ++G Q+H  ++  G   ++ V ++++ MY+KC  LD A  + +     + +SW+
Sbjct: 281 ATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWS 340

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +MI G+A+ G  +EA      M     + ++F + SVL+   +   L   K +H+ ++  
Sbjct: 341 TMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCV 400

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G E    V +ALI+MY+K G++  A  +F+  +  +++SWT++I G A HG  +EA+  F
Sbjct: 401 GLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLF 460

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFG-------QQVHAVFLKSGGCSSLSVDNSL 478
             +   G+ PD V   ++L+AC+   +++ G        +VH +      C S      +
Sbjct: 461 KKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQI------CPSKDHYGCM 514

Query: 479 VLVYAKCGCINDANRVFDSM-HTRDVITWTALIMGCAQNGK---GKEALQ 524
           + +  + G +NDA  +  SM   RD + W+ L+  C  +G    GK A +
Sbjct: 515 IDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAE 564



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 189/382 (49%), Gaps = 46/382 (12%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++  G++D   +LFE M+ RD  +W T+I +    G+   A K F               
Sbjct: 214 YNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFR-------------- 259

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                            +M+     P+++T   V+  C+  G ++ GEQ H + I+    
Sbjct: 260 -----------------RMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLV 302

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            +  V   ++ MY+KC  +  A  +F+     ++ ++W+TMI+GY+Q G G +A +    
Sbjct: 303 DSLSVANSIMAMYSKCWQLDLASTVFQGLSR-RDIISWSTMISGYAQGGCGEEAFDYLSW 361

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           MR EG   N+F F S+L+ C  ++  + G Q+H  +L  G E N  VQSALI+MY+KCG 
Sbjct: 362 MRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGS 421

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           +  A ++ + +E +N VSW +MI G+A  G+ +EA+ LFKK+    ++ D  T+ +VL  
Sbjct: 422 IKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAA 481

Query: 346 --FASNIDL-----NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL-DCAFMVFNLM 397
              A  +DL     N+   VH +       G       +ID+  + G L D   M+ ++ 
Sbjct: 482 CSHAGLVDLGFHYFNSLSKVHQICPSKDHYG------CMIDLLCRAGRLNDAESMIQSMP 535

Query: 398 QDKDVISWTSLITGCAYHGSYE 419
             +D + W++L+  C  HG  +
Sbjct: 536 FQRDDVVWSTLLRACRIHGDVD 557



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 132/284 (46%), Gaps = 46/284 (16%)

Query: 33  VKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE 92
           V   S  N  +  +S   ++D A  +F+ +S RD  +W+TMI+ YA              
Sbjct: 302 VDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQG------------ 349

Query: 93  TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
                              G   EAF+    M+ EG RP+++   +VL +C    +L++G
Sbjct: 350 -------------------GCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQG 390

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
           +Q H + +    + N  V + L++MY+KC  I EA  +F    +  N V+WT MI GY++
Sbjct: 391 KQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDE-AEYNNIVSWTAMINGYAE 449

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG-------AQVHGCILSSG 265
           +GY  +AI+ F+ +   G+  +  TF ++L AC+     D G       ++VH    S  
Sbjct: 450 HGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKD 509

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
                     +ID+  + G L+ A  +++      ++V W++++
Sbjct: 510 H------YGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLL 547


>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 750

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 251/704 (35%), Positives = 385/704 (54%), Gaps = 13/704 (1%)

Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA 168
           S +G   EAFE F +M   G   S Y+   +   C     L  G   H        + + 
Sbjct: 57  SKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRMGIENPSV 116

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
            +   ++ MY +C  + +A+ LF    D  N V+ TTMI+ Y++ G   KA+  F  M  
Sbjct: 117 LLQNCVLQMYCECGSLEDADKLFDEMSD-LNAVSRTTMISAYAEQGLLDKAVGLFSRMLE 175

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
            G +     + ++L +     A D G Q+H  ++ +G  +N  +++ +++MY KCG L  
Sbjct: 176 SGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVG 235

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
           A+R+ +   +   V+W  ++VG+ + G  ++AL LF  +    ++ D F +  VL   AS
Sbjct: 236 AKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACAS 295

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
             +L   K +H+ + K G E    V   L+D Y K  + + A   F  +++ + +SW+++
Sbjct: 296 LEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAI 355

Query: 409 ITGCAYHGSYEEALKYFSDMRI-SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG 467
           I+G      +EEA+K F  +R  + +  +    +SI  AC+ L     G QVHA  +K  
Sbjct: 356 ISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRS 415

Query: 468 GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYD 527
              S   +++L+ +Y+KCGC++DA+ VF+SM   D++ WTA I G A  G   EAL+ ++
Sbjct: 416 LIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFE 475

Query: 528 QMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRS 587
           +M++ G KP+ +TF+ +L ACSHAGL E  + Y ++M + Y + P  DHY CMID+  RS
Sbjct: 476 KMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARS 535

Query: 588 GKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLS 647
           G L EA   +  M  EPDA  WK  LS C  H +LELG+ A   L +L+P +   YV   
Sbjct: 536 GLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDPEDTAGYVLPF 595

Query: 648 NMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKID 707
           N+Y+ AGKWE+AA V KLM  R ++KE  CSW++   ++H FI  D+ HP   +IY K+ 
Sbjct: 596 NLYTWAGKWEEAAEVMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQSQEIYEKLK 655

Query: 708 EIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQG--APIRIFKN 765
           E        G++    F     E   +   L  HSE+LA+AFGL+++     API++FKN
Sbjct: 656 EF------DGFMEGDMFQCSMTERREQ---LLDHSERLAIAFGLISVNGNARAPIKVFKN 706

Query: 766 LRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           LR C DCH   K++S V    I++RDS RFHHFK G CSC DYW
Sbjct: 707 LRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 750



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 142/447 (31%), Positives = 237/447 (53%), Gaps = 6/447 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++  Y   G L +A KLF+E    N  + +++I  Y+  GL  +A  LF +M   G +
Sbjct: 120 NCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDK 179

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P       +L+       L  G Q H + I+     NA + TG+V+MY KC  +  A+ +
Sbjct: 180 PPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRV 239

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F      K  VAWT ++ GY+Q G    A++ F D+  EGVE + F F  +L ACA++  
Sbjct: 240 FDQMA-VKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEE 298

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
             FG Q+H C+   G E  V V + L+D Y KC   +SA R  +     N+VSW+++I G
Sbjct: 299 LRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISG 358

Query: 311 FARQGFHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           + +    +EA+  FK + +++ + ++ FTY S+    +   D N    VH+  +K    G
Sbjct: 359 YCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIG 418

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
            ++  +ALI MY+K G LD A  VF  M + D+++WT+ I+G AY+G+  EAL+ F  M 
Sbjct: 419 SQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMV 478

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD--NSLVLVYAKCGC 487
             G+ P+ V   ++L+AC+   ++E G+      L+    +  ++D  + ++ +YA+ G 
Sbjct: 479 SCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAP-TIDHYDCMIDIYARSGL 537

Query: 488 INDANRVFDSM-HTRDVITWTALIMGC 513
           +++A R   +M    D ++W   + GC
Sbjct: 538 LDEALRFMKNMPFEPDAMSWKCFLSGC 564


>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
          Length = 863

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 268/738 (36%), Positives = 398/738 (53%), Gaps = 6/738 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N M++     G    A ++F + P ++ F+W+ ++ GY   GL  EA +L+ +M   G R
Sbjct: 127 NAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVR 186

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  YT   VLR C      + G + H + ++  F     V+  L+ MYAKC  +  A  +
Sbjct: 187 PDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKV 246

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F       + ++W  MI G+ +NG     +E F  M  + V+ N  T  S+  A   +S 
Sbjct: 247 FDSM-TVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSD 305

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
             F  ++HG  +  GF  +V   ++LI MYA  G +  AR +    +  + ++W +MI G
Sbjct: 306 VTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISG 365

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           + + GF  +AL ++  M   ++  DD T  S L   A    L+    +H L    GF  Y
Sbjct: 366 YEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISY 425

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
             V NA+++MYAK   +D A  VF  M +KDV+SW+S+I G  ++    EAL YF  M +
Sbjct: 426 IVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHM-L 484

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
           + + P+ V   + L+ACA    L  G+++HA  L+ G      + N+L+ +Y KCG    
Sbjct: 485 ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGY 544

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           A   F +   +DV++W  +I G   +G G  AL F++QM+  G  PD +TFV LL ACS 
Sbjct: 545 AWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSR 604

Query: 551 AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
            G+       F SM + Y I P   HYACM+DLL R+G+L EA   +++M   PDA VW 
Sbjct: 605 GGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWG 664

Query: 611 ALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRG 670
           ALL+ CR+H  +ELGE AA  +  LEP +A  +V L ++Y+ A  W+  ARVRK M+ +G
Sbjct: 665 ALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVRKTMREKG 724

Query: 671 IRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVE 730
           +  + GCSWVE    VH F+++D  HP   +I + ++ I   +K +GY P      H  E
Sbjct: 725 LDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGYAP---VESHCPE 781

Query: 731 EEG-KEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIIL 789
           +E  K+     HSE+LAVAFGL+    G  I + KN   C  CH  +K IS +  R II+
Sbjct: 782 DEVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMISNIVRRDIIV 841

Query: 790 RDSNRFHHFKAGNCSCGD 807
           RDS + HHFK G+CSCGD
Sbjct: 842 RDSKQLHHFKDGSCSCGD 859



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 129/424 (30%), Positives = 223/424 (52%), Gaps = 2/424 (0%)

Query: 119 ELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMY 178
           +  W ++     P +     + RLC  +  ++ G +   +A          +   ++ M 
Sbjct: 74  QALWLLESSAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSML 133

Query: 179 AKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTF 238
            +    + A  +F   P+ ++  +W  M+ GY ++G   +A++ +  M   GV  + +TF
Sbjct: 134 VRFGETWHAWRVFAKMPE-RDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTF 192

Query: 239 PSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI 298
           P +L +C  V     G +VH  +L  GF   V V +AL+ MYAKCGD+ +AR++ +   +
Sbjct: 193 PCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTV 252

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
            + +SWN+MI G    G     L LF  M   +++ +  T  SV        D+  AK +
Sbjct: 253 MDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEM 312

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           H L VK GF G     N+LI MYA  G +  A  VF+ M  +D ++WT++I+G   +G  
Sbjct: 313 HGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFP 372

Query: 419 EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSL 478
           ++AL+ ++ M ++ + PD + ++S L+ACA L  L+ G ++H +    G  S + V N++
Sbjct: 373 DKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAI 432

Query: 479 VLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDY 538
           + +YAK   I+ A  VF  MH +DV++W+++I G   N +  EAL ++  MLA   KP+ 
Sbjct: 433 LEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLA-DVKPNS 491

Query: 539 ITFV 542
           +TF+
Sbjct: 492 VTFI 495



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 58/145 (40%), Gaps = 1/145 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           +G+  N +I  Y   G+   A   F     K+  +W+ +I G+  +G    A   F QM 
Sbjct: 525 EGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMV 584

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRG-EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
             G  P + T   +L  CS  G++  G E FH    K     N      +VD+ ++   +
Sbjct: 585 KIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQL 644

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITG 209
            EA       P   +   W  ++ G
Sbjct: 645 TEAYNFINEMPITPDAAVWGALLNG 669


>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
 gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
          Length = 652

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 268/769 (34%), Positives = 408/769 (53%), Gaps = 123/769 (15%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           F   G ++ A Q+F+ ++DRD F+W  M++ YA SG L  AK +F+  P  +  +W++L+
Sbjct: 2   FGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLGSWTALL 61

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
             ++                L G+     TL + ++        +R             D
Sbjct: 62  SAFA----------------LSGHHEEAKTLFDTMQ--------ER-------------D 84

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
           L A+ +  ++ + A    I +A+Y F   P+ ++ VAWT M+   ++ G    A E F  
Sbjct: 85  LIAWTI--MLTVLATFSNIEDAKYHFDQMPE-RDLVAWTAMLAANAERGQMENARETFDQ 141

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M                                        E N++  ++L+  Y + GD
Sbjct: 142 MP---------------------------------------ERNLFSWTSLLSAYGRSGD 162

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           + +A R+ +     N V+W +M+ G++  G    A   F  M  RD              
Sbjct: 163 VKAAGRVFDSMPEWNLVAWTAMLTGYSLSGDVVRAKRAFDSMPERD-------------- 208

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
                          LI  T          A++  YA  G+L     +F  M ++D+ISW
Sbjct: 209 ---------------LIAWT----------AMLSAYAFNGHLRYTREIFQRMPERDLISW 243

Query: 406 TSLITGCAYHGSYEEALKYFSDMR-----ISGICPDHVVVSSILSACAELTVLEFGQQVH 460
            +++     +   EE+ + F  M        G+ P+ V   ++L AC+ L  L  G+++H
Sbjct: 244 ATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIH 303

Query: 461 AVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGK 520
           A   + G  + L V N+LV  Y +CG + DA  VFD M  RDVI+W+++I   AQ G+  
Sbjct: 304 AAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVD 363

Query: 521 EALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACM 580
           EA++ Y +ML+ GT PD I F+ +LFACS++G+ E +  +F S+     ++P  +HYACM
Sbjct: 364 EAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACM 423

Query: 581 IDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNA 640
           +D+LGR+GKL +A+ LL  M   P   ++  +LSAC+++ D+E GE AA  +FEL+P N+
Sbjct: 424 VDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENS 483

Query: 641 MPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRT 700
            PY+ L+N+YS A + +DAAR+RKLM+ RGI+K+PGCSW+E   +VH FI+ D+ HP R 
Sbjct: 484 SPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEFIAGDKMHPQRD 543

Query: 701 DIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPI 760
           +IY++I  +   +KEAGY  D    L +VEE+ KE  L YHSEKLA+AFGL++ P GAP+
Sbjct: 544 EIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAFGLISTPPGAPL 603

Query: 761 RIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           RI KNLRVC DCH A K IS V  R I++RD+NRFHHF+ G CSC DYW
Sbjct: 604 RIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFQNGMCSCNDYW 652



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 116/477 (24%), Positives = 206/477 (43%), Gaps = 73/477 (15%)

Query: 43  LVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWS 102
           L  FSN   I++A   F++M +RD   W  M+AA A  G++  A++ F++ P +N F+W+
Sbjct: 95  LATFSN---IEDAKYHFDQMPERDLVAWTAMLAANAERGQMENARETFDQMPERNLFSWT 151

Query: 103 SLIYGYSNYGLDIEAFELF----------WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
           SL+  Y   G    A  +F          W   L GY              SL G + R 
Sbjct: 152 SLLSAYGRSGDVKAAGRVFDSMPEWNLVAWTAMLTGY--------------SLSGDVVRA 197

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
           ++    A  +  + +    T ++  YA    +     +F+  P+ ++ ++W TM+    +
Sbjct: 198 KR----AFDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRMPE-RDLISWATMVAALVE 252

Query: 213 NGYGFKAIECFRDMR-----VEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFE 267
           N    ++ E F  M       +G+  N+ TF ++L AC+ + A   G ++H  +   GF+
Sbjct: 253 NDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFD 312

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM 327
            ++ V +AL++ Y +CG L  A+ + +     + +SW+SMI  FA++G   EA+ L+ +M
Sbjct: 313 TDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRM 372

Query: 328 HARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
            +     DD  + SVL  C  S +   +     S++  T  E        ++D+  + G 
Sbjct: 373 LSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGK 432

Query: 387 LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSA 446
           L  A  +  LM                +H                   P  ++  ++LSA
Sbjct: 433 LRDAEDLLRLM---------------PFH-------------------PGPLLYMTMLSA 458

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDV 503
           C   T +E G+    V  +    +S S   +L  +Y+      DA R+   M  R +
Sbjct: 459 CKLYTDVERGEAAAEVVFELDPENS-SPYITLANIYSAAKRPKDAARIRKLMEERGI 514



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 13/182 (7%)

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           ++ + GC+  A ++FD++  RD  +W  ++   A++G    A   +D+M     +    +
Sbjct: 1   MFGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRM----PRWSLGS 56

Query: 541 FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
           +  LL A + +G  E A+  F++M +   I      +  M+ +L     + +AK   DQM
Sbjct: 57  WTALLSAFALSGHHEEAKTLFDTMQERDLIA-----WTIMLTVLATFSNIEDAKYHFDQM 111

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAA 660
             E D   W A+L+A    G +   E A     ++   N   +  L + Y  +G  + A 
Sbjct: 112 -PERDLVAWTAMLAANAERGQM---ENARETFDQMPERNLFSWTSLLSAYGRSGDVKAAG 167

Query: 661 RV 662
           RV
Sbjct: 168 RV 169


>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 258/794 (32%), Positives = 421/794 (53%), Gaps = 77/794 (9%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWS-SLIYGYSNYGLD 114
           G L ++  D D +    ++  Y     L +A ++F+E P      W+ ++I    +  L 
Sbjct: 157 GCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQ 216

Query: 115 IEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
            +  ELF +MQ    +    T+  VL+ C   G L   +Q HGY  +   D +  +   L
Sbjct: 217 -KGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPL 275

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ---------------------- 212
           + MY+K   +  A  +F    + +N  +W +MI+ Y+                       
Sbjct: 276 ISMYSKNGKLELARRVFDSM-ENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPD 334

Query: 213 -------------NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG 259
                        +GY  + +   + M+ EG + N  +  S+L A + +   + G + HG
Sbjct: 335 IVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHG 394

Query: 260 CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKE 319
            +L +GF+ +VYV ++LIDMY K   L SA+ + +  +  N  +WNS++ G++ +G  ++
Sbjct: 395 YVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFED 454

Query: 320 ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALID 379
           AL L  +M    IK D  T+                                   N +I 
Sbjct: 455 ALRLLNQMEKEGIKPDLVTW-----------------------------------NGMIS 479

Query: 380 MYAKQGNLDCAFMVFNLMQD----KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
            YA  G    A  V +  +      +V+SWT+LI+G +  G+  ++LK+F+ M+  G+ P
Sbjct: 480 GYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMP 539

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           +   ++ +L ACA L++L+ G+++H + +++G    + V  +L+ +Y+K   + +A++VF
Sbjct: 540 NSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVF 599

Query: 496 DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAE 555
             +  + + +W  +IMG A  G GKEA+  +++M   G  PD ITF  LL AC ++GL  
Sbjct: 600 RRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIG 659

Query: 556 NARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
               YF+SM   Y I P  +HY CM+DLLGR+G L EA  L+  M  +PDAT+W ALL +
Sbjct: 660 EGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGS 719

Query: 616 CRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEP 675
           CR+H +L+  E AA NLF+LEP N+  Y+ + N+YS   +WED   +R+LM + G+R   
Sbjct: 720 CRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQ 779

Query: 676 GCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKE 735
             SW++ N +VH+F S+++ HP    IY ++ +++  +K+ GYVPD+N    N++E  K+
Sbjct: 780 VWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQ 839

Query: 736 IGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRF 795
             L  H+EKLA+ +GL+ +  G PIR+ KN R+C DCH+A KYIS V  R + LRD  RF
Sbjct: 840 KILLSHTEKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRF 899

Query: 796 HHFKAGNCSCGDYW 809
           HHF+ G CSC D+W
Sbjct: 900 HHFREGKCSCNDFW 913



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 151/611 (24%), Positives = 267/611 (43%), Gaps = 81/611 (13%)

Query: 72  TMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE-AFELFWQMQLEGYR 130
            +I++Y   G    A  +F     +N+  W+S +  + +    +    E+F ++  +G  
Sbjct: 71  NLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVV 130

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
                    L+ C+    +  G + HG  IK  FDL+ ++   L++ Y +C  + +A  +
Sbjct: 131 FDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQV 190

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P+ +  + W   I    Q+    K +E FR M+   +++   T   +L AC  + A
Sbjct: 191 FHEMPNPEA-LLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGA 249

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            +   Q+HG +   G +++V + + LI MY+K G L+ ARR+ +  E  N  SWNSMI  
Sbjct: 250 LNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISS 309

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTY------------------------------- 339
           +A  GF  +A SLF ++ + D+K D  T+                               
Sbjct: 310 YAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPN 369

Query: 340 ----PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
                SVL   +    LN  K  H  +++ GF+   +V  +LIDMY K  +L  A  VF+
Sbjct: 370 SSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFD 429

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
            M+++++ +W SL++G ++ G +E+AL+  + M   GI PD V  + ++S          
Sbjct: 430 NMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISG--------- 480

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH----TRDVITWTALIM 511
                                     YA  GC  +A  V         T +V++WTALI 
Sbjct: 481 --------------------------YAMWGCGKEALAVLHQTKSLGLTPNVVSWTALIS 514

Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIK 571
           G +Q G  +++L+F+ QM   G  P+  +   LL AC+   L +  +     +    G  
Sbjct: 515 GSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGK-EIHCLSIRNGFI 573

Query: 572 PGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANN 631
                   +ID+  +S  L  A  +  ++  +  A+ W  ++    + G   LG+ A + 
Sbjct: 574 EDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLAS-WNCMIMGFAIFG---LGKEAISV 629

Query: 632 LFELEPMNAMP 642
             E++ +   P
Sbjct: 630 FNEMQKVGVGP 640



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/474 (27%), Positives = 232/474 (48%), Gaps = 38/474 (8%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK----NFFTW 101
           +S +G+++ A ++F+ M +R+  +WN+MI++YA  G L +A  LF E        +  TW
Sbjct: 279 YSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTW 338

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIK 161
           + L+ G+  +G   E   +  +MQ EG++P+  ++ +VL+  S  G L  G++ HGY ++
Sbjct: 339 NCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLR 398

Query: 162 TCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIE 221
             FD + +V T L+DMY K   +  A+ +F    + +N  AW ++++GYS  G    A+ 
Sbjct: 399 NGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKN-RNIFAWNSLVSGYSFKGMFEDALR 457

Query: 222 CFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYA 281
               M  EG++ +  T+  +++          G  + GC    G EA             
Sbjct: 458 LLNQMEKEGIKPDLVTWNGMIS----------GYAMWGC----GKEA------------- 490

Query: 282 KCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPS 341
               L    +        N VSW ++I G ++ G ++++L  F +M    +  +  +   
Sbjct: 491 ----LAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITC 546

Query: 342 VLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
           +L   AS   L   K +H L ++ GF    FV  ALIDMY+K  +L  A  VF  +Q+K 
Sbjct: 547 LLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKT 606

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ-VH 460
           + SW  +I G A  G  +EA+  F++M+  G+ PD +  +++LSAC    ++  G +   
Sbjct: 607 LASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFD 666

Query: 461 AVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
           ++         L     +V +  + G +++A  +  +M  + D   W AL+  C
Sbjct: 667 SMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSC 720


>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 242/610 (39%), Positives = 363/610 (59%), Gaps = 3/610 (0%)

Query: 202 AWTTMITGYSQNGYGFKAIECFRDMRVEG--VESNQFTFPSILTACAAVSARDFGAQVHG 259
           ++T+    +  N    KAI    +   E   +      + S+L +C A  A   G Q+H 
Sbjct: 40  SFTSSAPQFDNNQTHLKAIPSCSNPHAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHA 99

Query: 260 CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKE 319
            +  +GF  +  + + L+++Y  C  L SAR L +     N   WN +I G+A  G ++ 
Sbjct: 100 QVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEA 159

Query: 320 ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALID 379
           A+ L+ +M    +  D+FT+P VL   A+   + + + +H  +V+TG+E   FV  ALID
Sbjct: 160 AVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALID 219

Query: 380 MYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVV 439
           MYAK G +  A  VF+ +  +D + W S++   + +G  +  L   S+M ++G+ P    
Sbjct: 220 MYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEAT 279

Query: 440 VSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH 499
           + + +SA A+   L  G+++H +  +    S   V  +LV +YAKCG +  A  +F+ + 
Sbjct: 280 LVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLG 339

Query: 500 TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW 559
            + V++W A+I G A +G   EAL  +++M  R  KPD+ITFVG+L ACSH GL E    
Sbjct: 340 VKRVVSWNAMITGYAMHGHATEALDLFEEM-NRVAKPDHITFVGVLSACSHGGLLEEGWM 398

Query: 560 YFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVH 619
           +FE+M + Y I P   HY CM+DLLG SG+L EA  L+ QM   PD+ VW ALL++C++H
Sbjct: 399 FFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIH 458

Query: 620 GDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSW 679
            ++ELGE A   L ELEP +A  YV LSN+Y+ AGKWE  A++RKLM  R ++K   CSW
Sbjct: 459 ANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSW 518

Query: 680 VETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLA 739
           +E  ++VH F+S D  HPL  +IYS+++ +  L+KEAGY P      H+VE++ K   + 
Sbjct: 519 IEVKNKVHAFLSGDTSHPLSDEIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVC 578

Query: 740 YHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFK 799
            HSE+LA+AFGL++ P G  + I KNLR+C DCH A+K+IS +  R I +RD NR+HHFK
Sbjct: 579 SHSERLAIAFGLISTPPGTRLLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFK 638

Query: 800 AGNCSCGDYW 809
            G CSCGDYW
Sbjct: 639 DGVCSCGDYW 648



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 111/327 (33%), Positives = 178/327 (54%), Gaps = 4/327 (1%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+     ++L+ C  +  ++ G+Q H       F  +  + T LV++Y  C  +  A  L
Sbjct: 73  PTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLL 132

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P   N   W  +I GY+ NG    A++ +  M   G+  + FTFP +L ACAA+SA
Sbjct: 133 FDRIPK-HNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSA 191

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            + G ++H  ++ +G+E +V+V +ALIDMYAKCG + SAR + +   + + V WNSM+  
Sbjct: 192 IEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAA 251

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           +++ G     LSL  +M    ++  + T  + ++  A N  L   + +H L  +  FE +
Sbjct: 252 YSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESH 311

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM-R 429
             V  AL+DMYAK G++  A  +F  +  K V+SW ++ITG A HG   EAL  F +M R
Sbjct: 312 DKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNR 371

Query: 430 ISGICPDHVVVSSILSACAELTVLEFG 456
           ++   PDH+    +LSAC+   +LE G
Sbjct: 372 VAK--PDHITFVGVLSACSHGGLLEEG 396



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 212/435 (48%), Gaps = 37/435 (8%)

Query: 67  GFTWNTMIAA-----YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELF 121
           GF ++T+IA      Y     L  A+ LF+  P  N F W+ LI GY+  G    A +L+
Sbjct: 105 GFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLY 164

Query: 122 WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
           +QM   G  P  +T   VL+ C+    ++ G + H + ++T ++ + FV   L+DMYAKC
Sbjct: 165 YQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKC 224

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
            C+  A  +F      ++ V W +M+  YSQNG+    +    +M + G+   + T  + 
Sbjct: 225 GCVGSAREVFDKIL-VRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTA 283

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           ++A A  +A   G ++HG      FE++  V++AL+DMYAKCG +  AR L E   +   
Sbjct: 284 ISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRV 343

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           VSWN+MI G+A  G   EAL LF++M+ R  K D  T+  VL+  +    L        +
Sbjct: 344 VSWNAMITGYAMHGHATEALDLFEEMN-RVAKPDHITFVGVLSACSHGGLLEEG----WM 398

Query: 362 IVKTGFEGYKFVNNA-----LIDMYAKQGNLDCAF---MVFNLMQDKDVISWTSLITGCA 413
             +T    YK          ++D+    G LD A+   M   ++ D  V  W +L+  C 
Sbjct: 399 FFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGV--WGALLNSCK 456

Query: 414 YHGSYEEALKYFSDMRISGICPD----HVVVSSILS------ACAELTVLEFGQQVHAVF 463
            H + E  L   +  R+  + PD    +V++S+I +        A+L  L   +++    
Sbjct: 457 IHANVE--LGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRLK--- 511

Query: 464 LKSGGCSSLSVDNSL 478
            KS  CS + V N +
Sbjct: 512 -KSIACSWIEVKNKV 525



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 125/265 (47%), Gaps = 29/265 (10%)

Query: 42  ALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTW 101
           AL    +  EI E   + +   ++D F    +I  YA  G +  A+++F++   ++   W
Sbjct: 188 ALSAIEHGREIHE--HVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLW 245

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIK 161
           +S++  YS  G       L  +M L G RP++ TL   +   +    L +G + HG + +
Sbjct: 246 NSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWR 305

Query: 162 TCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIE 221
             F+ +  V T LVDMYAKC  +  A  LF+     K  V+W  MITGY+ +G+  +A++
Sbjct: 306 QEFESHDKVKTALVDMYAKCGSVRVARNLFERL-GVKRVVSWNAMITGYAMHGHATEALD 364

Query: 222 CFRDM-RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF------------EA 268
            F +M RV   + +  TF  +L+AC+           HG +L  G+            + 
Sbjct: 365 LFEEMNRV--AKPDHITFVGVLSACS-----------HGGLLEEGWMFFETMIRDYKIDP 411

Query: 269 NVYVQSALIDMYAKCGDLDSARRLL 293
            V   + ++D+    G LD A  L+
Sbjct: 412 TVQHYTCMVDLLGHSGRLDEAYNLI 436


>gi|302793382|ref|XP_002978456.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
 gi|300153805|gb|EFJ20442.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
          Length = 899

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 272/749 (36%), Positives = 409/749 (54%), Gaps = 30/749 (4%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG-Y 129
           N ++  Y   GR+ EAK +F   P +N  +W++LI   +  G   +A ++F  M L+G  
Sbjct: 165 NAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHCKDAMQVFHLMDLDGSV 224

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           RP+  T  +V+  CS    L RG+  H   I+T FD   FV   LV+MY KC  +  A  
Sbjct: 225 RPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDRARL 284

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +F+     +N V+WT MI  Y+Q G+   A + ++ M     E N  TF +++ +C    
Sbjct: 285 VFEKM-SSRNVVSWTVMIWAYAQQGFIRAAFDLYKRM---DCEPNAVTFMAVMDSCLRPE 340

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE--YSEIDNEVSWNSM 307
                 Q+H  +++SGF+++  +Q  L+ MY KCG +DSA  + E      +N V+WN+M
Sbjct: 341 DLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSVDSAWSIFENLKERSNNAVTWNAM 400

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I G A+ G  K+AL  F KM    ++ +  TY + L   +S  DL   + +H+ I+    
Sbjct: 401 ISGLAQHGESKQALECFWKMELEGVRPNSVTYLASLEACSSLNDLTRGRQLHARILLENI 460

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
                 +NA+I+MY K G+LD A   F  M ++DV+SW ++I   A HGS  +AL++F  
Sbjct: 461 HEANL-SNAVINMYGKCGSLDEAMDEFAKMPERDVVSWNTMIATYAQHGSGRQALEFFKQ 519

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC--SSLSVDNSLVLVYAKC 485
           M + G   D       + AC  +  L  G+ +H++   +  C      V  +LV +YA+C
Sbjct: 520 MDLEGWTTDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARC 579

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G ++DA  VF   H+R+++TW+ LI  CAQ+G+  EAL  + +M  +GTKPD +TF  L+
Sbjct: 580 GSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQGTKPDALTFSTLV 639

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
            ACS  G+ ++  +YF SM + Y I    DH+  M+DLLGR+G L EA+ ++ +    P 
Sbjct: 640 AACSRRGVVKDGVFYFVSMVEDYSIPASEDHFGGMVDLLGRAGWLEEAEQVMRK---NPC 696

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPY----VQLSNMYSTAGKWEDAAR 661
           A     LL AC VHGD+E G R A +  EL+  N+  +      L+ +Y  AG+WEDAAR
Sbjct: 697 ALAHAVLLGACHVHGDVERGIRIAQSALELDWKNSASFAASMAMLAELYGAAGRWEDAAR 756

Query: 662 VRKLMKSRGIRKEPGC-SWVETNSQVHIF-ISEDRGHPLRTD-IYSKIDEI-MLLIKEAG 717
           VRK ++SR  R+EPG  SW+E  ++VH F   +DR    R D I  ++  +  L ++E G
Sbjct: 757 VRKAVESRNARREPGGRSWIEVKNRVHEFGEDDDRLQGPRLDKIRGELQRLSSLAVEEGG 816

Query: 718 YVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMK 777
              D N   H        I    HSEK+A+ FG+++ P G  IRI KNLR C DCH   K
Sbjct: 817 ICKDENARAH--------ILGCCHSEKVAIGFGIVSTPAGQLIRIVKNLRACHDCHAFAK 868

Query: 778 YISAVYLRHIILRDSNRFHHFKA-GNCSC 805
           ++S    R I +RD    H F+  G+CSC
Sbjct: 869 FVSRRIQREISVRDPYGLHCFQTNGSCSC 897



 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 174/557 (31%), Positives = 299/557 (53%), Gaps = 11/557 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           +  N +I  YA  G L +A ++F   P  N F+W++LI  Y+  G   E   LF +MQL+
Sbjct: 62  YIQNHLIFMYAKCGCLEDALEVFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLD 121

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G +P  +    VL  CS  G L  G+  H  A+    +    V   +V++Y KC  + EA
Sbjct: 122 GTKPDAFVFSTVLTACSSAGALNEGKAIHDCAVLAGMETQ-VVGNAIVNLYGKCGRVHEA 180

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACA 246
           + +F+  P+ +N V+W  +I   +QNG+   A++ F  M ++G V  N  TF S++ AC+
Sbjct: 181 KAVFERLPE-RNLVSWNALIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACS 239

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            +     G   H  I+ +GF++ ++V ++L++MY KCG +D AR + E     N VSW  
Sbjct: 240 NLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTV 299

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           MI  +A+QGF + A  L+K+M   D + +  T+ +V++      DL  A+ +H+ +V +G
Sbjct: 300 MIWAYAQQGFIRAAFDLYKRM---DCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASG 356

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK--DVISWTSLITGCAYHGSYEEALKY 424
           F+    +   L+ MY K G++D A+ +F  ++++  + ++W ++I+G A HG  ++AL+ 
Sbjct: 357 FDSDAVLQVCLVTMYGKCGSVDSAWSIFENLKERSNNAVTWNAMISGLAQHGESKQALEC 416

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           F  M + G+ P+ V   + L AC+ L  L  G+Q+HA  L        ++ N+++ +Y K
Sbjct: 417 FWKMELEGVRPNSVTYLASLEACSSLNDLTRGRQLHARILLE-NIHEANLSNAVINMYGK 475

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG +++A   F  M  RDV++W  +I   AQ+G G++AL+F+ QM   G   D  T++G 
Sbjct: 476 CGSLDEAMDEFAKMPERDVVSWNTMIATYAQHGSGRQALEFFKQMDLEGWTTDRATYLGA 535

Query: 545 LFAC-SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           + AC S   LA     +         ++  P     ++ +  R G L +AK++  +    
Sbjct: 536 IDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSR 595

Query: 604 PDATVWKALLSACRVHG 620
            +   W  L++AC  HG
Sbjct: 596 -NLVTWSNLIAACAQHG 611



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 152/502 (30%), Positives = 274/502 (54%), Gaps = 23/502 (4%)

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
           E  +P++Y   ++L+ C+ +     G+  H + + +   +N ++   L+ MYAKC C+ +
Sbjct: 22  ESLQPARYA--SLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCGCLED 79

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A  +F++ P+  N  +WT +IT Y++ G+  + +  FR M+++G + + F F ++LTAC+
Sbjct: 80  ALEVFELLPN-PNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTACS 138

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
           +  A + G  +H C + +G E  V V +A++++Y KCG +  A+ + E     N VSWN+
Sbjct: 139 SAGALNEGKAIHDCAVLAGMETQV-VGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNA 197

Query: 307 MIVGFARQGFHKEALSLFKKMHAR-DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +I   A+ G  K+A+ +F  M     ++ +D T+ SV++  ++ +DL   KS H  I++T
Sbjct: 198 LIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRT 257

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           GF+ Y FV N+L++MY K G++D A +VF  M  ++V+SWT +I   A  G    A   +
Sbjct: 258 GFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAAFDLY 317

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             M      P+ V   +++ +C     L   +Q+HA  + SG  S   +   LV +Y KC
Sbjct: 318 KRMDCE---PNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKC 374

Query: 486 GCINDANRVFDSMHTR--DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           G ++ A  +F+++  R  + +TW A+I G AQ+G+ K+AL+ + +M   G +P+ +T++ 
Sbjct: 375 GSVDSAWSIFENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNSVTYLA 434

Query: 544 LLFACSH-----AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLD 598
            L ACS       G   +AR   E++ +        +    +I++ G+ G L EA     
Sbjct: 435 SLEACSSLNDLTRGRQLHARILLENIHEA-------NLSNAVINMYGKCGSLDEAMDEFA 487

Query: 599 QMVGEPDATVWKALLSACRVHG 620
           +M  E D   W  +++    HG
Sbjct: 488 KM-PERDVVSWNTMIATYAQHG 508



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/393 (32%), Positives = 207/393 (52%), Gaps = 9/393 (2%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N+++  Y   G +  A+ +F +   +N  +W+ +I+ Y+  G    AF+L+ +M  E
Sbjct: 264 FVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRMDCE 323

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
              P+  T   V+  C     L R EQ H + + + FD +A +   LV MY KC  +  A
Sbjct: 324 ---PNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSVDSA 380

Query: 188 EYLFKMFPDGKNH-VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
             +F+   +  N+ V W  MI+G +Q+G   +A+ECF  M +EGV  N  T+ + L AC+
Sbjct: 381 WSIFENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNSVTYLASLEACS 440

Query: 247 AVSARDFGAQVHGCILSSGF-EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           +++    G Q+H  IL     EAN  + +A+I+MY KCG LD A          + VSWN
Sbjct: 441 SLNDLTRGRQLHARILLENIHEAN--LSNAVINMYGKCGSLDEAMDEFAKMPERDVVSWN 498

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +MI  +A+ G  ++AL  FK+M       D  TY   ++   S   L   K++HS++   
Sbjct: 499 TMIATYAQHGSGRQALEFFKQMDLEGWTTDRATYLGAIDACGSVPSLALGKTIHSIVATA 558

Query: 366 G--FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
               E    V  AL+ MYA+ G+L  A  VF     +++++W++LI  CA HG   EAL 
Sbjct: 559 APCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALD 618

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
            F +M++ G  PD +  S++++AC+   V++ G
Sbjct: 619 LFREMQLQGTKPDALTFSTLVAACSRRGVVKDG 651



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 121/386 (31%), Positives = 199/386 (51%), Gaps = 7/386 (1%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           + S+L  C    +   G  VH  ILSSG   N Y+Q+ LI MYAKCG L+ A  + E   
Sbjct: 29  YASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCGCLEDALEVFELLP 88

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
             N  SW ++I  +A++G  +E L LF+KM     K D F + +VL   +S   LN  K+
Sbjct: 89  NPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKA 148

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           +H   V  G E  + V NA++++Y K G +  A  VF  + +++++SW +LI   A +G 
Sbjct: 149 IHDCAVLAGME-TQVVGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGH 207

Query: 418 YEEALKYFSDMRISG-ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
            ++A++ F  M + G + P+     S++ AC+ L  L  G+  H   +++G  S L V N
Sbjct: 208 CKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGN 267

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           SLV +Y KCG ++ A  VF+ M +R+V++WT +I   AQ G  + A   Y +M     +P
Sbjct: 268 SLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRM---DCEP 324

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           + +TF+ ++ +C        A      M    G         C++ + G+ G +  A ++
Sbjct: 325 NAVTFMAVMDSCLRPEDLPRAEQIHAHM-VASGFDSDAVLQVCLVTMYGKCGSVDSAWSI 383

Query: 597 LDQMVGEP-DATVWKALLSACRVHGD 621
            + +     +A  W A++S    HG+
Sbjct: 384 FENLKERSNNAVTWNAMISGLAQHGE 409



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 35/213 (16%)

Query: 37  SDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF 95
           ++L+ A+++ +   G +DEA   F KM +RD  +WNTMIA YA  G  R           
Sbjct: 463 ANLSNAVINMYGKCGSLDEAMDEFAKMPERDVVSWNTMIATYAQHGSGR----------- 511

Query: 96  KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
                               +A E F QM LEG+   + T    +  C     L  G+  
Sbjct: 512 --------------------QALEFFKQMDLEGWTTDRATYLGAIDACGSVPSLALGKTI 551

Query: 156 HGYAIKT--CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQN 213
           H        C + +  V T LV MYA+C  + +A+ +F      +N V W+ +I   +Q+
Sbjct: 552 HSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVF-WRSHSRNLVTWSNLIAACAQH 610

Query: 214 GYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           G   +A++ FR+M+++G + +  TF +++ AC+
Sbjct: 611 GRENEALDLFREMQLQGTKPDALTFSTLVAACS 643



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 9/142 (6%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           ++D      ++  YA  G L +AK +F  +  +N  TWS+LI   + +G + EA +LF +
Sbjct: 563 EQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFRE 622

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRG-----EQFHGYAIKTCFDLNAFVVTGLVDMY 178
           MQL+G +P   T   ++  CS +G+++ G          Y+I    D       G+VD+ 
Sbjct: 623 MQLQGTKPDALTFSTLVAACSRRGVVKDGVFYFVSMVEDYSIPASEDH----FGGMVDLL 678

Query: 179 AKCKCIFEAEYLFKMFPDGKNH 200
            +   + EAE + +  P    H
Sbjct: 679 GRAGWLEEAEQVMRKNPCALAH 700


>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 262/726 (36%), Positives = 408/726 (56%), Gaps = 5/726 (0%)

Query: 85  EAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVLRLC 143
           +A  LF+  P  + F ++ LI  +S       A  L+  ++      P  +T   V+   
Sbjct: 60  QASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGA 119

Query: 144 SLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAW 203
           S  GL         ++I   F  + FV + +V  Y K   +  A  +F    + ++ V W
Sbjct: 120 SSLGLGLLLHA---HSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLE-RDTVLW 175

Query: 204 TTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS 263
            TM++G  +N    +AI  F DM   G+  +  T  ++L   A +     G  +    + 
Sbjct: 176 NTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMK 235

Query: 264 SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSL 323
            GF ++ YV + L  +Y+KCG++++AR L       + VS+N+MI G+      + ++ L
Sbjct: 236 VGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRL 295

Query: 324 FKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK 383
           FK++     K++  +   ++  F     L+  + +H    K+G      V+ AL  +Y++
Sbjct: 296 FKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSR 355

Query: 384 QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSI 443
              ++ A ++F+   +K + SW ++I+G A +G  E+A+  F +M+   + P+ V V+SI
Sbjct: 356 LNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSI 415

Query: 444 LSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDV 503
           LSACA+L  L  G+ VH +  +    S++ V  +L+ +YAKCG I +A R+F  M  ++ 
Sbjct: 416 LSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNA 475

Query: 504 ITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFES 563
           +TW A+I G   +G G EAL  +++ML     P  +TF+ +L+ACSHAGL       F S
Sbjct: 476 VTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRS 535

Query: 564 MDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
           M   +G +P P+HYACM+DLLGR+G L +A   + +M  EP   VW ALL AC +H D  
Sbjct: 536 MVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDAN 595

Query: 624 LGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETN 683
           L   A++ LFEL+P N   YV LSN+YS    + +AA VR ++K R + K PGC+ +E  
Sbjct: 596 LARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVA 655

Query: 684 SQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSE 743
           + +HIF S D+ HP  T IY+ ++++   ++EAG+  +   ALH+VEEE KE+ +  HSE
Sbjct: 656 NTLHIFTSGDQSHPQATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSE 715

Query: 744 KLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNC 803
           KLA+AFGL+T   G  IRI KNLRVC DCH A K+IS +  R I++RD+NRFHHFK G C
Sbjct: 716 KLAIAFGLITSEPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGIC 775

Query: 804 SCGDYW 809
           SCGDYW
Sbjct: 776 SCGDYW 781



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 203/396 (51%), Gaps = 5/396 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  + ++A Y    R+  A+K+F+    ++   W++++ G        EA  +F  M 
Sbjct: 140 DLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMV 199

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G      T+  VL   +    L  G      A+K  F  +A+V+TGL  +Y+KC  I 
Sbjct: 200 KGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIE 259

Query: 186 EAEYLFKMF--PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
            A  LF     PD    V++  MI+GY+ N     ++  F+++ V G + N  +   ++ 
Sbjct: 260 TARLLFGQIGQPD---LVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIP 316

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
                        +HG    SG  +N  V +AL  +Y++  +++SAR L + S   +  S
Sbjct: 317 VFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLAS 376

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN+MI G+A+ G  ++A+SLF++M   +++ +  T  S+L+  A    L+  K VH LI 
Sbjct: 377 WNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLIN 436

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           +  FE   FV+ ALIDMYAK G++  A  +F++M +K+ ++W ++I+G   HG   EAL 
Sbjct: 437 RESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALN 496

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
            F++M  S + P  V   S+L AC+   ++  G ++
Sbjct: 497 LFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEI 532



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 116/218 (53%), Gaps = 2/218 (0%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +   Y+    +  A+ LF+E+  K+  +W+++I GY+  GL  +A  LF +MQ    RP+
Sbjct: 349 LTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPN 408

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
             T+ ++L  C+  G L  G+  H    +  F+ N FV T L+DMYAKC  I EA+ LF 
Sbjct: 409 PVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFS 468

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
           M P+ KN V W  MI+GY  +GYG +A+  F +M    V     TF S+L AC+      
Sbjct: 469 MMPE-KNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVR 527

Query: 253 FGAQV-HGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
            G ++    +   GFE      + ++D+  + G+LD A
Sbjct: 528 EGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKA 565



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 8/117 (6%)

Query: 23  ARYTHNVGNSVKPASDL--NRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
            ++ H++ N     S++  + AL+D ++  G I EA +LF  M +++  TWN MI+ Y  
Sbjct: 428 GKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGL 487

Query: 80  SGRLREAKKLFNETPFKNF----FTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRP 131
            G   EA  LFNE           T+ S++Y  S+ GL  E  E+F  M  + G+ P
Sbjct: 488 HGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEP 544


>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 249/665 (37%), Positives = 380/665 (57%), Gaps = 3/665 (0%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            QL    S    +  N+++  YA  G + +AK +F     K+  +W+ LI GYS  G   
Sbjct: 34  AQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQKGTVG 93

Query: 116 EAF--ELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG 173
            +F  ELF +M+ E   P+ +T   V    S       G Q H  AIKT    + FV + 
Sbjct: 94  YSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSS 153

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
           L++MY K  C+ +A  +F   P+ +N V+W T+I+GY+     F+A E F  MR E    
Sbjct: 154 LINMYCKIGCMLDARKVFDTIPE-RNTVSWATIISGYAMERMAFEAWELFXLMRREEGAH 212

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
           ++F + S+L+A        +G Q+H   L +G  +   V +AL+ MY KCG LD A +  
Sbjct: 213 DKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTF 272

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
           E S   ++++W++MI G+A+ G   EAL+LF  MH    K  +FT+  V+N  +    L 
Sbjct: 273 ELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALE 332

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
             K +H   +K G+E   +   AL+DMYAK G+L  A   F+ +++ D++ WTS+I+G A
Sbjct: 333 EGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYA 392

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
            +G  E AL  +  M++  I P  + ++S+L AC+ L  LE G+Q+HA  +K G    + 
Sbjct: 393 QNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVP 452

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
           + ++L  +YAKCG + D N VF  M +RD++TW A+I G +QNG+G +AL+ ++++    
Sbjct: 453 IGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGT 512

Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
           TKPDY+TFV +L ACSH GL E  + YF  M   +GI P  +HYACM+D+L R+GKL E 
Sbjct: 513 TKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHET 572

Query: 594 KALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTA 653
           K  ++    +    +W+ LL ACR + + ELG  A   L EL    +  Y+ LS++Y+  
Sbjct: 573 KEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYILLSSIYTAL 632

Query: 654 GKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLI 713
           G+ +D  RVR+LMK RG+ KEPGCSW+E  SQVH+F+  D+ HP    I S++  +   +
Sbjct: 633 GRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVVGDQIHPQIVKICSELRRLRDHM 692

Query: 714 KEAGY 718
           K+  Y
Sbjct: 693 KDECY 697



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 168/532 (31%), Positives = 261/532 (49%), Gaps = 11/532 (2%)

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M L    P   +  ++L  C+ +  LQ+G+  H   ++T    + ++   LV++YAKC  
Sbjct: 1   MNLYLLPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGS 60

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQN---GYGFKAIECFRDMRVEGVESNQFTFPS 240
           I +A+ +F+   + K+ V+W  +I GYSQ    GY F  +E F+ MR E    N  TF  
Sbjct: 61  IVKAKLVFESITN-KDVVSWNCLINGYSQKGTVGYSF-VMELFQRMRAENTLPNGHTFSG 118

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           + TA ++      G Q H   + +    +V+V S+LI+MY K G +  AR++ +     N
Sbjct: 119 VFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERN 178

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
            VSW ++I G+A +    EA  LF  M   +   D F Y SVL+       ++  K +H 
Sbjct: 179 TVSWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHC 238

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
           L +K G      V NAL+ MY K G LD A   F L  DKD I+W+++ITG A  G   E
Sbjct: 239 LALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHE 298

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
           AL  F +M ++G  P       +++AC+++  LE G+Q+H   LK+G    +    +LV 
Sbjct: 299 ALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVD 358

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           +YAKCG + DA + FD +   D++ WT++I G AQNG+ + AL  Y +M      P  +T
Sbjct: 359 MYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELT 418

Query: 541 FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
              +L ACS     E  +       K YG        + +  +  + G L +   +  +M
Sbjct: 419 MASVLRACSSLAALEQGKQIHAQTIK-YGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRM 477

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP-YVQLSNMYS 651
               D   W A++S    +G+   G +A     EL      P YV   N+ S
Sbjct: 478 PSR-DIMTWNAMISGLSQNGE---GLKALELFEELRHGTTKPDYVTFVNVLS 525



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 193/393 (49%), Gaps = 37/393 (9%)

Query: 31  NSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKL 89
           N +   + +  ALV  +   G +D+A + FE   D+D  TW+ MI  YA +G        
Sbjct: 243 NGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSH----- 297

Query: 90  FNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLL 149
                                     EA  LF+ M L G +PS++T   V+  CS  G L
Sbjct: 298 --------------------------EALNLFYNMHLNGNKPSEFTFVGVINACSDIGAL 331

Query: 150 QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
           + G+Q HGY++K  ++   + +T LVDMYAKC  + +A   F    +  + V WT+MI+G
Sbjct: 332 EEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKE-PDIVLWTSMISG 390

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
           Y+QNG    A+  +  M++E +  ++ T  S+L AC++++A + G Q+H   +  GF   
Sbjct: 391 YAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLE 450

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA 329
           V + SAL  MYAKCG L+    +       + ++WN+MI G ++ G   +AL LF+++  
Sbjct: 451 VPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRH 510

Query: 330 RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN--ALIDMYAKQGNL 387
              K D  T+ +VL+   S++ L     V+  ++   F     V +   ++D+ ++ G L
Sbjct: 511 GTTKPDYVTFVNVLSA-CSHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGKL 569

Query: 388 -DCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
            +    + +   D  +  W  L+  C  + +YE
Sbjct: 570 HETKEFIESATIDHGMCLWRILLGACRNYRNYE 602



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 149/323 (46%), Gaps = 21/323 (6%)

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           DL   K++H+ +++TG     ++ N+L+++YAK G++  A +VF  + +KDV+SW  LI 
Sbjct: 25  DLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLIN 84

Query: 411 GCAYHGS--YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
           G +  G+  Y   ++ F  MR     P+    S + +A +       G Q HA+ +K+  
Sbjct: 85  GYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSN 144

Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
              + V +SL+ +Y K GC+ DA +VFD++  R+ ++W  +I G A      EA + +  
Sbjct: 145 FYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFXL 204

Query: 529 MLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA----CMIDLL 584
           M       D   +  +L A +   L      ++        +K G    A     ++ + 
Sbjct: 205 MRREEGAHDKFIYTSVLSALTVPDLV-----HYGKQIHCLALKNGLLSIASVGNALVTMY 259

Query: 585 GRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNA---- 640
           G+ G L +A     ++ G+ D   W A+++     GD       A NLF    +N     
Sbjct: 260 GKCGCLDDALKTF-ELSGDKDDITWSAMITGYAQAGD----SHEALNLFYNMHLNGNKPS 314

Query: 641 -MPYVQLSNMYSTAGKWEDAARV 662
              +V + N  S  G  E+  ++
Sbjct: 315 EFTFVGVINACSDIGALEEGKQI 337


>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 249/683 (36%), Positives = 383/683 (56%), Gaps = 43/683 (6%)

Query: 131 PSQYTLDN----VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
           P ++ + N    +L  C     L   ++ H + +K   + ++ V+  L  +Y  C  +  
Sbjct: 2   PLRFEVKNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVL 61

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A  LF   P+  + + W  +I  Y+ NG    AI+ +  M   GV  N++T+P +L AC+
Sbjct: 62  ARRLFDEIPN-PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACS 120

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            + A + G ++H      G E++V+V +AL+D YAKCG L  A+RL       + V+WN+
Sbjct: 121 GLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNA 180

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           MI G +  G   +A+ L  +M    I  +  T   VL             +   L     
Sbjct: 181 MIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVL------------PTCQCL----- 223

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
                        +YA++        +F++M  ++ +SW+++I G       +EAL  F 
Sbjct: 224 -------------LYARK--------IFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFR 262

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
            M++SGI PD   +  +L AC+ L  L+ G   H   +  G  +   + N+L+ +Y+KCG
Sbjct: 263 MMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCG 322

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
            I+ A  VF+ M   D+++W A+I+G   +G G EAL  +  +LA G KPD ITF+ LL 
Sbjct: 323 KISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLS 382

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           +CSH+GL    R +F++M + + I P  +H  CM+D+LGR+G + EA   +  M  EPD 
Sbjct: 383 SCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDV 442

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
            +W ALLSACR+H ++ELGE  +  +  L P +   +V LSN+YS AG+W+DAA +R   
Sbjct: 443 RIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQ 502

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFAL 726
           K  G++K PGCSW+E N  VH F+  D+ H   + I  K++E+++ +K  GY  + +F  
Sbjct: 503 KDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVF 562

Query: 727 HNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRH 786
            +VEEE KE  L YHSEKLA+AFG+L L  G PI + KNLRVCGDCHTA+K+++ +  R 
Sbjct: 563 QDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKRE 622

Query: 787 IILRDSNRFHHFKAGNCSCGDYW 809
           I +RD+NRFHHFK G C+CGD+W
Sbjct: 623 ITVRDANRFHHFKNGTCNCGDFW 645



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 203/459 (44%), Gaps = 41/459 (8%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
              +  S+ D    + +   Y +  ++  A++LF+E P  +   W+ +I  Y+  G    
Sbjct: 33  HFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDG 92

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
           A +L+  M   G RP++YT   VL+ CS    ++ G + H +A     + + FV T LVD
Sbjct: 93  AIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVD 152

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
            YAKC  + EA+ LF      ++ VAW  MI G S  G    A++    M+ EG+  N  
Sbjct: 153 FYAKCGILVEAQRLFSSMSH-RDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSS 211

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           T   +L  C              C+L                          AR++ +  
Sbjct: 212 TIVGVLPTCQ-------------CLL-------------------------YARKIFDVM 233

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
            + NEVSW++MI G+      KEAL +F+ M    I  D  T   VL   +    L +  
Sbjct: 234 GVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGF 293

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
             H  ++  GF     + NALIDMY+K G +  A  VFN M   D++SW ++I G   HG
Sbjct: 294 CSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHG 353

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAEL-TVLEFGQQVHAVFLKSGGCSSLSVD 475
              EAL  F D+   G+ PD +    +LS+C+    V+E      A+         +   
Sbjct: 354 LGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHC 413

Query: 476 NSLVLVYAKCGCINDANRVFDSM-HTRDVITWTALIMGC 513
             +V +  + G I++A+    +M    DV  W+AL+  C
Sbjct: 414 ICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSAC 452



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 190/411 (46%), Gaps = 49/411 (11%)

Query: 42  ALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTW 101
            L+   +  EI    ++F   SD   F    ++  YA  G L EA++LF+    ++   W
Sbjct: 121 GLLAIEDGVEIHSHAKMFGLESDV--FVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAW 178

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIK 161
           +++I G S YGL  +A +L  QMQ EG  P+  T+  VL                     
Sbjct: 179 NAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVL--------------------- 217

Query: 162 TCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIE 221
                              C+C+  A  +F +    +N V+W+ MI GY  +    +A++
Sbjct: 218 -----------------PTCQCLLYARKIFDVM-GVRNEVSWSAMIGGYVASDCMKEALD 259

Query: 222 CFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYA 281
            FR M++ G++ +  T   +L AC+ ++A   G   HG ++  GF  +  + +ALIDMY+
Sbjct: 260 IFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYS 319

Query: 282 KCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPS 341
           KCG +  AR +    +  + VSWN+MI+G+   G   EAL LF  + A  +K DD T+  
Sbjct: 320 KCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFIC 379

Query: 342 VL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA-FMVFNLMQD 399
           +L +C  S + +       ++               ++D+  + G +D A   + N+  +
Sbjct: 380 LLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFE 439

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH----VVVSSILSA 446
            DV  W++L++ C  H + E  L      +I  + P+     V++S+I SA
Sbjct: 440 PDVRIWSALLSACRIHKNIE--LGEEVSKKIQSLGPESTGNFVLLSNIYSA 488


>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
 gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 868

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 236/669 (35%), Positives = 392/669 (58%), Gaps = 2/669 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D  T + ++  YA    L ++  +F+E P KN+ +WS+ I G       +   +LF +
Sbjct: 189 DYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKE 248

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           MQ +G   SQ T  +V R C+     + G Q H +A+KT F  +  V T  +DMYAKC  
Sbjct: 249 MQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDN 308

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A  LF + PD  N  ++  MI GY++N  GF+A + F  ++      ++ +    L+
Sbjct: 309 MSDAYKLFSLLPD-HNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALS 367

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           A A +     G Q+HG  + S   +N+ V +A++DMY KCG L  A  L +  EI + VS
Sbjct: 368 AAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVS 427

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN++I    +     + LS F  M    ++ D+FTY SVL   A     +N   VH  I+
Sbjct: 428 WNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRII 487

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K+G     FV +AL+DMY+K G ++ A  +   ++++ ++SW ++I+G +     E++ +
Sbjct: 488 KSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQR 547

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
           +FS M   G+ PD+   +++L  CA L  +  G+Q+HA  +K    S + + ++LV +Y+
Sbjct: 548 FFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYS 607

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG ++D+  +F     RD +TW A+I G A +G G+EAL+ ++ ML    KP++ TFV 
Sbjct: 608 KCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVS 667

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           +L ACSH G A+   +YF+ M  +Y ++P  +HY+CM+D+LGRSG++ EA  L+  M  E
Sbjct: 668 VLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFE 727

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
            DA +W+ LLS C++ G++E+ E+AA++L +L+P ++  Y  LSN+Y+ AG W+  +++R
Sbjct: 728 ADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIR 787

Query: 664 KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMN 723
           + M+S  ++KEPGCSW+E   +VH F+  D+ HP    IYS +D ++  ++ +G  P+++
Sbjct: 788 QTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLICDMRRSGCAPEID 847

Query: 724 -FALHNVEE 731
              +  VEE
Sbjct: 848 TIQVEEVEE 856



 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 185/620 (29%), Positives = 318/620 (51%), Gaps = 17/620 (2%)

Query: 21  GPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           G   + H + +   P   +   L+  +     ++ A ++FE+M  RD  +WNTM+   A 
Sbjct: 43  GKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEMPQRDIVSWNTMVFGCAG 102

Query: 80  SGRLREAKKLFNETPFK-NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDN 138
           +GR+  A+ +FN  P   +  +W+SLI GY   G   ++  +F +M+  G      TL  
Sbjct: 103 AGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTLAV 162

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
            L++CSL      G Q HG A++  FD +    + LVDMYAKC  + ++  +F   PD K
Sbjct: 163 SLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPD-K 221

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           N ++W+  I G  QN    + ++ F++M+ +G+  +Q T+ S+  +CA +SA   G Q+H
Sbjct: 222 NWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLH 281

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR--QGF 316
              L + F ++V V +A +DMYAKC ++  A +L       N  S+N+MI+G+AR  QGF
Sbjct: 282 CHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGF 341

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
             +A  LF ++       D+ +    L+  A     +    +H L +K+       V NA
Sbjct: 342 --QAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANA 399

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           ++DMY K G L  A  +F+ M+ +D +SW ++IT C  + S  + L +F  M  S + PD
Sbjct: 400 ILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPD 459

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFD 496
                S+L ACA       G +VH   +KSG    + V ++LV +Y+KCG + +A ++  
Sbjct: 460 EFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHY 519

Query: 497 SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAEN 556
            +  + +++W A+I G +   K +++ +F+  ML  G +PD  T+  +L  C++      
Sbjct: 520 RLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGL 579

Query: 557 ARWYFESMDKVYGIKPGPDHY--ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
            +     M K+  +    D Y  + ++D+  + G + ++  L+ +   + D+  W A++ 
Sbjct: 580 GKQIHAQMIKLELLS---DVYITSTLVDMYSKCGNMHDS-LLMFRKAPKRDSVTWNAMIC 635

Query: 615 ACRVHGDLELGERAANNLFE 634
               HG   LGE A   LFE
Sbjct: 636 GFAYHG---LGEEAL-ELFE 651



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 155/545 (28%), Positives = 255/545 (46%), Gaps = 49/545 (8%)

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE-------- 186
           T  ++ + CS +  L+ G++ H + I + F    FV   L+ MY KC C  E        
Sbjct: 26  TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKC-CALEYAYKVFEE 84

Query: 187 ------------------------AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIEC 222
                                   A+ +F   P   + V+W ++I+GY QNG   K+I  
Sbjct: 85  MPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAV 144

Query: 223 FRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK 282
           F  MR  GV  +  T    L  C+ +  +  G Q+HG  +  GF+ +V   SAL+DMYAK
Sbjct: 145 FLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAK 204

Query: 283 CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
           C  L+ +  +       N +SW++ I G  +       L LFK+M  + I +   TY SV
Sbjct: 205 CNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASV 264

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV 402
               A          +H   +KT F     V  A +DMYAK  N+  A+ +F+L+ D ++
Sbjct: 265 FRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNL 324

Query: 403 ISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAV 462
            S+ ++I G A +    +A K F  ++ +    D V +S  LSA A +     G Q+H +
Sbjct: 325 QSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGL 384

Query: 463 FLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEA 522
            +KS   S++ V N+++ +Y KCG + +A+ +FD M  RD ++W A+I  C QN    + 
Sbjct: 385 AIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKT 444

Query: 523 LQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPGPDHY--- 577
           L  +  ML    +PD  T+  +L AC+        R +   M+ V+G  IK G       
Sbjct: 445 LSHFGAMLRSKMEPDEFTYGSVLKACA------GQRAFSNGME-VHGRIIKSGMGLKMFV 497

Query: 578 -ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL- 635
            + ++D+  + G + EA+ +  ++  E     W A++S   +    E  +R  +++ E+ 
Sbjct: 498 GSALVDMYSKCGMMEEAEKIHYRL-EEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMG 556

Query: 636 -EPMN 639
            EP N
Sbjct: 557 VEPDN 561


>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Glycine max]
          Length = 673

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 244/623 (39%), Positives = 358/623 (57%), Gaps = 35/623 (5%)

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A  +F + P+ +N + +  MI  Y  N     A+  FRDM   G   + +T+P +L AC+
Sbjct: 86  ARNVFDVIPE-RNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACS 144

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
                  G Q+HG +   G + N++V + LI +Y KCG L  AR +L+  +  + VSWNS
Sbjct: 145 CSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNS 204

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           M+ G+A+     +AL + ++M     K D  T  S+L                  +  T 
Sbjct: 205 MVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLL----------------PAVTNTS 248

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
            E   +V                  M  NL + K ++SW  +I+    +    +++  + 
Sbjct: 249 SENVLYVEE----------------MFMNL-EKKSLVSWNVMISVYMKNSMPGKSVDLYL 291

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
            M    + PD +  +S+L AC +L+ L  G+++H    +   C ++ ++NSL+ +YA+CG
Sbjct: 292 QMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCG 351

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
           C+ DA RVFD M  RDV +WT+LI      G+G  A+  + +M   G  PD I FV +L 
Sbjct: 352 CLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILS 411

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ACSH+GL    ++YF+ M   Y I P  +H+AC++DLLGRSG++ EA  ++ QM  +P+ 
Sbjct: 412 ACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNE 471

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
            VW ALLS+CRV+ ++++G  AA+ L +L P  +  YV LSN+Y+ AG+W +   +R LM
Sbjct: 472 RVWGALLSSCRVYSNMDIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLM 531

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFAL 726
           K R IRK PG S VE N+QVH F++ D  HP   +IY ++  ++  +KE GYVP  + AL
Sbjct: 532 KRRRIRKMPGISNVELNNQVHTFLAGDTYHPQSKEIYEELSVLVGKMKELGYVPKTDSAL 591

Query: 727 HNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRH 786
           H+VEEE KE  LA HSEKLA+ F +L   Q +PIRI KNLRVCGDCH A K IS +  R 
Sbjct: 592 HDVEEEDKECHLAVHSEKLAIVFAILN-TQESPIRITKNLRVCGDCHIAAKLISKIVQRE 650

Query: 787 IILRDSNRFHHFKAGNCSCGDYW 809
           I++RD+NRFHHFK G CSCGDYW
Sbjct: 651 IVIRDTNRFHHFKDGICSCGDYW 673



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 180/385 (46%), Gaps = 34/385 (8%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           ++ AYA  G    A+ +F+  P +N   ++ +I  Y N  L  +A  +F  M   G+ P 
Sbjct: 73  LMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPD 132

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
            YT   VL+ CS    L+ G Q HG   K   DLN FV  GL+ +Y KC C+ EA  +  
Sbjct: 133 HYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLD 192

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
                K+ V+W +M+ GY+QN     A++  R+M     + +  T  S+L A    S+ +
Sbjct: 193 EM-QSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSSEN 251

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
                            +YV+   +++  K                 + VSWN MI  + 
Sbjct: 252 V----------------LYVEEMFMNLEKK-----------------SLVSWNVMISVYM 278

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
           +     +++ L+ +M   +++ D  T  SVL        L   + +H  + +        
Sbjct: 279 KNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNML 338

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           + N+LIDMYA+ G L+ A  VF+ M+ +DV SWTSLI+     G    A+  F++M+ SG
Sbjct: 339 LENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSG 398

Query: 433 ICPDHVVVSSILSACAELTVLEFGQ 457
             PD +   +ILSAC+   +L  G+
Sbjct: 399 QSPDSIAFVAILSACSHSGLLNEGK 423



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 153/328 (46%), Gaps = 13/328 (3%)

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           D+   K+VHS +    F     +   L+  YA +G    A  VF+++ +++VI +  +I 
Sbjct: 47  DIKTLKNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIR 106

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
               +  Y++AL  F DM   G  PDH     +L AC+    L  G Q+H    K G   
Sbjct: 107 SYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDL 166

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
           +L V N L+ +Y KCGC+ +A  V D M ++DV++W +++ G AQN +  +AL    +M 
Sbjct: 167 NLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMD 226

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRS--- 587
               KPD  T   LL A ++   +EN  +  E    +   K     +  MI +  ++   
Sbjct: 227 GVRQKPDACTMASLLPAVTNTS-SENVLYVEEMFMNLE--KKSLVSWNVMISVYMKNSMP 283

Query: 588 GKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLS 647
           GK ++    + +   EPDA    ++L AC     L LG R       +E     P + L 
Sbjct: 284 GKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHE---YVERKKLCPNMLLE 340

Query: 648 N----MYSTAGKWEDAARVRKLMKSRGI 671
           N    MY+  G  EDA RV   MK R +
Sbjct: 341 NSLIDMYARCGCLEDAKRVFDRMKFRDV 368



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 155/359 (43%), Gaps = 35/359 (9%)

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           VH  + +  F  N  +   L+  YA  G+   AR + +     N + +N MI  +     
Sbjct: 54  VHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHL 113

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
           + +AL +F+ M +     D +TYP VL   + + +L     +H  + K G +   FV N 
Sbjct: 114 YDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNG 173

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           LI +Y K G L  A  V + MQ KDV+SW S++ G A +  +++AL    +M      PD
Sbjct: 174 LIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPD 233

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFD 496
              ++S+L A                       ++ S +N L +             +F 
Sbjct: 234 ACTMASLLPA----------------------VTNTSSENVLYV-----------EEMFM 260

Query: 497 SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAEN 556
           ++  + +++W  +I    +N    +++  Y QM     +PD IT   +L AC        
Sbjct: 261 NLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLL 320

Query: 557 ARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
            R   E +++   + P       +ID+  R G L +AK + D+M    D   W +L+SA
Sbjct: 321 GRRIHEYVER-KKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFR-DVASWTSLISA 377



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 163/370 (44%), Gaps = 44/370 (11%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G +F+   D + F  N +IA Y   G L EA+ + +E   K+  +W+S++ GY+      
Sbjct: 157 GAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFD 216

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           +A ++  +M     +P           C++  LL         A+      N   V    
Sbjct: 217 DALDICREMDGVRQKPDA---------CTMASLLP--------AVTNTSSENVLYV---- 255

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
                       E +F M  + K+ V+W  MI+ Y +N    K+++ +  M    VE + 
Sbjct: 256 ------------EEMF-MNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDA 302

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            T  S+L AC  +SA   G ++H  +       N+ ++++LIDMYA+CG L+ A+R+ + 
Sbjct: 303 ITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDR 362

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
            +  +  SW S+I  +   G    A++LF +M       D   + ++L+  + +  LN  
Sbjct: 363 MKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEG 422

Query: 356 KSVHSLIVKTGFEGYKFVN-----NALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLI 409
           K       K   + YK          L+D+  + G +D A+ +   M  K +   W +L+
Sbjct: 423 K----FYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALL 478

Query: 410 TGCAYHGSYE 419
           + C  + + +
Sbjct: 479 SSCRVYSNMD 488



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 6/154 (3%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N++I  YA  G L +AK++F+   F++  +W+SLI  Y   G    A  LF +MQ  G  
Sbjct: 341 NSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQS 400

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAE 188
           P       +L  CS  GLL  G +F+   +   + +   +     LVD+  +   + EA 
Sbjct: 401 PDSIAFVAILSACSHSGLLNEG-KFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAY 459

Query: 189 YLFKMFPDGKNHVAWTTMITG---YSQNGYGFKA 219
            + K  P   N   W  +++    YS    G  A
Sbjct: 460 NIIKQMPMKPNERVWGALLSSCRVYSNMDIGILA 493


>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
 gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 242/672 (36%), Positives = 378/672 (56%), Gaps = 37/672 (5%)

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VE 232
            + +Y+    +  A +LF   P   +   WT +I+  +++G   +AI+ + D R +  VE
Sbjct: 17  FIKVYSNSGDLQRARHLFDKIPQ-PDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVE 75

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
            ++    S+  ACA++       +VH   +  GF ++V + +ALIDMY KC   + AR +
Sbjct: 76  PDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLV 135

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
            E     + +SW SM   +   G  +EAL  F+KM     + +  T  S+L       DL
Sbjct: 136 FEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDL 195

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT-- 410
            + + VH  +V+ G  G  FV++AL++MYA   ++  A +VF+ M  +D +SW  LIT  
Sbjct: 196 KSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAY 255

Query: 411 ---------------------------------GCAYHGSYEEALKYFSDMRISGICPDH 437
                                            GC  +G  E+AL+  S M+ SG  P+ 
Sbjct: 256 FLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQ 315

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
           + ++S+L AC  L  L  G+Q+H    +      L+   +LV +YAKCG +  + RVF  
Sbjct: 316 ITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSM 375

Query: 498 MHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENA 557
           M  RD ++W  +I+  + +G G+EAL  + +M+  G +P+ +TF G+L  CSH+ L +  
Sbjct: 376 MTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEG 435

Query: 558 RWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACR 617
              F+SM + + ++P  DH++CM+D+L R+G+L EA   + +M  EP A  W ALL  CR
Sbjct: 436 LLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCR 495

Query: 618 VHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGC 677
           V+ ++ELG  AAN LFE+E  N   YV LSN+  +A  W +A+  RKLM+ RG+ K PGC
Sbjct: 496 VYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGC 555

Query: 678 SWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIG 737
           SW++  ++VH F+  D+ +    +IY  +D +   ++ AGY+P+ +F L +V++E KE  
Sbjct: 556 SWIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNTDFVLQDVDQEEKEEV 615

Query: 738 LAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHH 797
           L  HSEKLAVAFG+L L   + IR+FKNLR+CGDCH A+K+++ +    II+RDS RFHH
Sbjct: 616 LCNHSEKLAVAFGVLNLNGESSIRVFKNLRICGDCHNAIKFMAKIVGVKIIVRDSLRFHH 675

Query: 798 FKAGNCSCGDYW 809
           F+ G CSC D+W
Sbjct: 676 FRDGLCSCQDFW 687



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/478 (27%), Positives = 222/478 (46%), Gaps = 39/478 (8%)

Query: 74  IAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPS 132
           I  Y+NSG L+ A+ LF++ P  +  TW+ LI   + +G  +EA + +   + +    P 
Sbjct: 18  IKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPD 77

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
           +  L +V + C+    +   ++ H  AI+  F  +  +   L+DMY KC+C   A  +F+
Sbjct: 78  KLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFE 137

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
             P  ++ ++WT+M + Y   G   +A+  FR M + G   N  T  SIL AC  +    
Sbjct: 138 GMP-FRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLK 196

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR---------------------- 290
            G +VHG ++ +G   NV+V SAL++MYA C  +  A+                      
Sbjct: 197 SGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYF 256

Query: 291 -------------RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
                        R++      N  SWN++I G  + G  ++AL +  +M     K +  
Sbjct: 257 LNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQI 316

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           T  SVL    +   L   K +H  I +  F        AL+ MYAK G+L+ +  VF++M
Sbjct: 317 TITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMM 376

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
             +D +SW ++I   + HG+ EEAL  F +M  SG+ P+ V  + +LS C+   +++ G 
Sbjct: 377 TKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGL 436

Query: 458 QVHAVFLKSGGCSSLSVDNS-LVLVYAKCGCINDANRVFDSMHTRDVI-TWTALIMGC 513
            +     +       +  +S +V V ++ G + +A      M        W AL+ GC
Sbjct: 437 LIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGC 494



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 134/483 (27%), Positives = 220/483 (45%), Gaps = 54/483 (11%)

Query: 42  ALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTW 101
           +L D  N+  + E    F   SD      N +I  Y        A+ +F   PF++  +W
Sbjct: 90  SLRDVMNAKRVHEDAIRFGFCSDV--LLGNALIDMYGKCRCSEGARLVFEGMPFRDVISW 147

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIK 161
           +S+   Y N GL  EA   F +M L G RP+  T+ ++L  C+    L+ G + HG+ ++
Sbjct: 148 TSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVR 207

Query: 162 TCFDLNAFVVTGLVDMYAKCKCIFEAEYLF------------------------------ 191
                N FV + LV+MYA C  I +A+ +F                              
Sbjct: 208 NGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSV 267

Query: 192 --KMFPDGK--NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +M  +G   N+ +W  +I G  QNG   KA+E    M+  G + NQ T  S+L AC  
Sbjct: 268 FGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTN 327

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           + +   G Q+HG I    F  ++   +AL+ MYAKCGDL+ +RR+       + VSWN+M
Sbjct: 328 LESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTM 387

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTG 366
           I+  +  G  +EAL LF++M    ++ +  T+  VL+ C  S +         S+     
Sbjct: 388 IIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHS 447

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALKYF 425
            E     ++ ++D+ ++ G L+ A+     M  +    +W +L+ GC  + + E  L   
Sbjct: 448 VEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVYKNVE--LGRI 505

Query: 426 SDMRISGICPD----HVVVSSIL------SACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           +  R+  I  D    +V++S+IL      S  +E   L   + V     K+ GCS + V 
Sbjct: 506 AANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGV----TKNPGCSWIQVR 561

Query: 476 NSL 478
           N +
Sbjct: 562 NRV 564


>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 231/569 (40%), Positives = 349/569 (61%)

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           IL  CA       G   H  IL  G + ++   + LI+MY+KCG +D AR++ +     +
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
            VSWN+MI    + G   EAL L  +M        +FT  SVL   A+   L+  + +H+
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
             +K   +   FV  AL+D+YAK G +  A  VF  M D+ V++W+S+  G   +  YE+
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
           AL  F     +G+  D  ++SS++ ACA L  +  G+QV+A+  KSG CS++ V +SL+ 
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLID 309

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           +YAKCG I ++ +VF  +  R+V+ W A+I G +++ +  E +  +++M   G  P+ +T
Sbjct: 310 MYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVT 369

Query: 541 FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
           FV +L AC H GL +  + YF+ M K + + P   HY+CM+D L R+G++ EA  L+ ++
Sbjct: 370 FVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKL 429

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAA 660
                A++W +LL++CR HG+LEL E AA  LF++EP N+  Y+ LSNMY+  GKW++ A
Sbjct: 430 PFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVA 489

Query: 661 RVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
           ++RKL+K   ++KE G SW+E   +VH+F+  +R HP   +IYSK++E+M  +++ GY  
Sbjct: 490 KMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKV 549

Query: 721 DMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYIS 780
           +    LH V E  K+  L +HSEKLA   GLL LP  APIRI KNLR+CGDCH+ MK  S
Sbjct: 550 ETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLAS 609

Query: 781 AVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             + R +I+RD+NRFHHFK G CSCGD+W
Sbjct: 610 KFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638



 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 118/358 (32%), Positives = 194/358 (54%), Gaps = 3/358 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D  T N +I  Y+  G +  A+++F+E P ++  +W+++I   +  G + EA +L  QMQ
Sbjct: 98  DLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQ 157

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            EG   S++T+ +VL  C+ K  L   +  H +AIK   DLN FV T L+D+YAKC  + 
Sbjct: 158 REGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMK 217

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A  +F+  PD ++ V W++M  GY QN    +A+  FR     G++ +QF   S++ AC
Sbjct: 218 DAVCVFESMPD-RSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICAC 276

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A ++A   G QV+  +  SGF +N++V S+LIDMYAKCG ++ + ++    E  N V WN
Sbjct: 277 AGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWN 336

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +MI G +R     E + LF+KM    +  +D T+ SVL+       +   +    L+ K 
Sbjct: 337 AMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKE 396

Query: 366 -GFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
                  F  + ++D  ++ G +  A+ ++  L  +     W SL+  C  HG+ E A
Sbjct: 397 HHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELA 454



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 178/320 (55%), Gaps = 1/320 (0%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           +L+LC+ + LL +G+  H   +      +      L++MY+KC  +  A  +F   P  +
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMP-SR 128

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           + V+W TMI   +QNG   +A++    M+ EG   ++FT  S+L ACAA  A      +H
Sbjct: 129 SLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLH 188

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
              + +  + NV+V +AL+D+YAKCG +  A  + E     + V+W+SM  G+ +   ++
Sbjct: 189 AFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYE 248

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           +AL+LF+K     +K D F   SV+   A    +   K V++L+ K+GF    FV ++LI
Sbjct: 249 QALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLI 308

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
           DMYAK G ++ ++ VF  ++ ++V+ W ++I+G + H    E +  F  M+  G+ P+ V
Sbjct: 309 DMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDV 368

Query: 439 VVSSILSACAELTVLEFGQQ 458
              S+LSAC  + +++ GQ+
Sbjct: 369 TFVSVLSACGHMGLVKKGQK 388



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 121/256 (47%), Gaps = 7/256 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D + F    ++  YA  G +++A  +F   P ++  TWSS+  GY    +  +A  LF +
Sbjct: 197 DLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRK 256

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
               G +  Q+ + +V+  C+    +  G+Q +    K+ F  N FV + L+DMYAKC  
Sbjct: 257 AWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGG 316

Query: 184 IFEAEYLFKMFPD--GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
           I E+   +K+F D   +N V W  MI+G S++    + +  F  M+  G+  N  TF S+
Sbjct: 317 IEES---YKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSV 373

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEA-NVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           L+AC  +     G +    +      A NV+  S ++D  ++ G +  A  L+     + 
Sbjct: 374 LSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNA 433

Query: 301 EVS-WNSMIVGFARQG 315
             S W S++      G
Sbjct: 434 SASMWGSLLASCRTHG 449



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 16/180 (8%)

Query: 440 VSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH 499
           V  IL  CA+  +L  G+  HA  L  G  + L   N L+ +Y+KCG ++ A +VFD M 
Sbjct: 67  VHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMP 126

Query: 500 TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC-SHAGLAENAR 558
           +R +++W  +I    QNG+  EAL    QM   GT     T   +L AC +   L+E   
Sbjct: 127 SRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQL 186

Query: 559 WYFESMDKVYGIKPGPDH----YACMIDLLGRSGKLIEAKALLDQMVGEPDATV--WKAL 612
            +       + IK   D        ++D+  + G + +A  + + M   PD +V  W ++
Sbjct: 187 LH------AFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESM---PDRSVVTWSSM 237


>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
          Length = 798

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 270/771 (35%), Positives = 410/771 (53%), Gaps = 86/771 (11%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +   + +G I+ A   FE M  R   ++N ++A Y  +     A  LF   P ++  
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           ++++LI G S     +   +    +    + PS  +  ++LR     GLL    +     
Sbjct: 81  SYNALISGLSLRRQTLP--DAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQM 138

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
            +        ++ GL+D       + EA  LF   PD ++ VAWT M++GY Q G   +A
Sbjct: 139 PERNHVSYTVLLGGLLD----AGRVNEARRLFDEMPD-RDVVAWTAMLSGYCQAGRITEA 193

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
              F +M                                        + NV   +A+I  
Sbjct: 194 RALFDEMP---------------------------------------KRNVVSWTAMISG 214

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           YA+ G+++ AR+L E     NEVSW +M+VG+ + G  ++A  LF  M           +
Sbjct: 215 YAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMP---------EH 265

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
           P V  C                             NA++  + ++G +D A  VF  M++
Sbjct: 266 P-VAAC-----------------------------NAMMVGFGQRGMVDAAKTVFEKMRE 295

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           +D  +W+++I     +    EAL  F +M   G+ P++  V SIL+ CA L VL++G++V
Sbjct: 296 RDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREV 355

Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKG 519
           HA  L+      +   ++L+ +Y KCG ++ A RVF +   +D++ W ++I G AQ+G G
Sbjct: 356 HAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLG 415

Query: 520 KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC 579
           ++AL  +  M   G  PD IT++G L ACS+ G  +  R  F SM     I+PG +HY+C
Sbjct: 416 EQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSC 475

Query: 580 MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMN 639
           M+DLLGRSG + EA  L+  M  EPDA +W AL+ ACR+H + E+ E AA  L ELEP N
Sbjct: 476 MVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEVAAKKLLELEPGN 535

Query: 640 AMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISED-RGHPL 698
           A PYV LS++Y++ G+WEDA+++RK + SR + K PGCSW+E + +VH+F S D   HP 
Sbjct: 536 AGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPE 595

Query: 699 RTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA 758
              I   ++++  L+ E+GY  D +F LH+++EE K   L YHSE+ AVA+GLL +P+G 
Sbjct: 596 HAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGM 655

Query: 759 PIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           PIR+ KNLRVCGDCH+A+K I+ +  R I+LRD+NRFHHFK G CSC DYW
Sbjct: 656 PIRVMKNLRVCGDCHSAIKLIAKITSREIVLRDANRFHHFKDGFCSCRDYW 706



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 34/276 (12%)

Query: 35  PASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP 94
           P +  N  +V F   G +D A  +FEKM +RD  TW+ MI AY  +  L EA   F    
Sbjct: 266 PVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFR--- 322

Query: 95  FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ 154
                                   E+ W+    G RP+  ++ ++L +C+   +L  G +
Sbjct: 323 ------------------------EMLWR----GVRPNYPSVISILTVCAALAVLDYGRE 354

Query: 155 FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
            H   ++  FD++ F V+ L+ MY KC  + +A+ +F  F + K+ V W +MITGY+Q+G
Sbjct: 355 VHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTF-EPKDIVMWNSMITGYAQHG 413

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV-HGCILSSGFEANVYVQ 273
            G +A+  F DMR+ G+  +  T+   LTAC+       G ++ +   ++S         
Sbjct: 414 LGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHY 473

Query: 274 SALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
           S ++D+  + G ++ A  L++   ++ + V W +++
Sbjct: 474 SCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALM 509


>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 792

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 247/656 (37%), Positives = 374/656 (57%), Gaps = 5/656 (0%)

Query: 155 FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
            HG AI    D    + + +V MY K   + +A  +F   P+ K+ + W TMI+GY +N 
Sbjct: 141 IHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPE-KDTILWNTMISGYRKNE 199

Query: 215 YGFKAIECFRDMRVEG-VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
              ++I+ FRD+  E     +  T   IL A A +     G Q+H     +G  ++ YV 
Sbjct: 200 MYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVL 259

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
           +  I +Y+KCG +  A  L       + V++N+MI G+   G  + +LSLFK++     K
Sbjct: 260 TGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAK 319

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
           +   T  S++        L    ++H   +K+ F  +  V+ AL  +Y+K   ++ A  +
Sbjct: 320 LKSSTLVSLVPVSG---HLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKL 376

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           F+   +K + SW ++I+G   +G  E+A+  F +M+ S   P+ V ++ ILSACA+L  L
Sbjct: 377 FDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGAL 436

Query: 454 EFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC 513
             G+ VH +   +   SS+ V  +L+ +YAKCG I +A R+FD M  ++ +TW  +I G 
Sbjct: 437 SLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGY 496

Query: 514 AQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPG 573
             +G G+EAL  + +ML  G  P  +TF+ +L+ACSHAGL +     F SM   YG +P 
Sbjct: 497 GLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPS 556

Query: 574 PDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLF 633
             HYAC++D+LGR+G L  A   ++ M  +P  +VW+ LL ACR+H D  L    +  LF
Sbjct: 557 VKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLF 616

Query: 634 ELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISED 693
           EL+P N   +V LSN++S    +  AA VR+  K R + K PG + +E     H+F S D
Sbjct: 617 ELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGD 676

Query: 694 RGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLT 753
           + HP    I+ K++++   ++EAGY P+   ALH+VEEE +E+ +  HSE+LA+AFGL+ 
Sbjct: 677 QSHPQVKAIHEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIA 736

Query: 754 LPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
              G  IRI KNLRVC DCHTA K IS +  R I++RD+NRFHHFK G CSCGDYW
Sbjct: 737 TEPGTEIRIIKNLRVCLDCHTATKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 133/463 (28%), Positives = 236/463 (50%), Gaps = 11/463 (2%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           GQ      D +    + ++  Y    R+ +A+K+F+  P K+   W+++I GY    + +
Sbjct: 143 GQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYV 202

Query: 116 EAFELFWQMQLEG-YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
           E+ ++F  +  E   R    TL ++L   +    L+ G Q H  A KT    + +V+TG 
Sbjct: 203 ESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGF 262

Query: 175 VDMYAKCKCIFEAEYLFKMF--PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
           + +Y+KC  I  A  LF+ F  PD    VA+  MI GY+ NG    ++  F+++ + G +
Sbjct: 263 ISLYSKCGKIKMASTLFREFRRPDI---VAYNAMIHGYTSNGETELSLSLFKELMLSGAK 319

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
               T  S++     +        +HG  L S F ++  V +AL  +Y+K  +++SAR+L
Sbjct: 320 LKSSTLVSLVPVSGHLM---LIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKL 376

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
            + S   +  SWN+MI G+ + G  ++A+SLF++M   +   +  T   +L+  A    L
Sbjct: 377 FDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGAL 436

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
           +  K VH L+  T FE   +V+ ALI MYAK G++  A  +F+ M  K+ ++W ++I+G 
Sbjct: 437 SLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGY 496

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV-HAVFLKSGGCSS 471
             HG  +EAL  FS+M  SGI P  V    +L AC+   +++ G ++ +++  + G   S
Sbjct: 497 GLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPS 556

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRD-VITWTALIMGC 513
           +     +V +  + G +  A +  ++M  +     W  L+  C
Sbjct: 557 VKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGAC 599



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 127/249 (51%), Gaps = 4/249 (1%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +   Y+    +  A+KLF+E+P K+  +W+++I GY+  GL  +A  LF +MQ   + P+
Sbjct: 360 LTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPN 419

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
             T+  +L  C+  G L  G+  H     T F+ + +V T L+ MYAKC  I EA  LF 
Sbjct: 420 PVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFD 479

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
             P  KN V W TMI+GY  +G+G +A+  F +M   G+     TF  +L AC+      
Sbjct: 480 FMPK-KNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVK 538

Query: 253 FGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
            G ++   ++   GFE +V   + ++D+  + G L  A + +E   I    S    ++G 
Sbjct: 539 EGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGA 598

Query: 312 ARQGFHKEA 320
            R   HK+ 
Sbjct: 599 CR--IHKDT 605



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 107/450 (23%), Positives = 191/450 (42%), Gaps = 37/450 (8%)

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
           AQ H  I+  GF  ++ + + L    +  G +  AR +    +  +   +N ++ GF+  
Sbjct: 37  AQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVN 96

Query: 315 GFHKEALSLFKKMH-ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
                +L++F  +  + D+K +  TY   ++  +   D      +H   +  G +    +
Sbjct: 97  ESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLL 156

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
            + ++ MY K   ++ A  VF+ M +KD I W ++I+G   +  Y E+++ F D+ I+  
Sbjct: 157 GSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDL-INES 215

Query: 434 CP--DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
           C   D   +  IL A AEL  L  G Q+H++  K+G  S   V    + +Y+KCG I  A
Sbjct: 216 CTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMA 275

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
           + +F      D++ + A+I G   NG+ + +L  + +++  G K    T V L+    H 
Sbjct: 276 STLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHL 335

Query: 552 GLAENARWY-------------------------FESMDKVYGIKPGPD--HYACMIDLL 584
            L      Y                          ES  K++   P      +  MI   
Sbjct: 336 MLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395

Query: 585 GRSGKLIEAKALLDQMVG---EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAM 641
            ++G   +A +L  +M      P+      +LSAC   G L LG +  ++L       + 
Sbjct: 396 TQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLG-KWVHDLVRSTDFESS 454

Query: 642 PYVQ--LSNMYSTAGKWEDAARVRKLMKSR 669
            YV   L  MY+  G   +A R+   M  +
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDFMPKK 484



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 13/119 (10%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE--------TPFKN 97
           ++  G I EA +LF+ M  ++  TWNTMI+ Y   G  +EA  +F+E        TP   
Sbjct: 465 YAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTP--- 521

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
             T+  ++Y  S+ GL  E  E+F  M    G+ PS      V+ +    G LQR  QF
Sbjct: 522 -VTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQF 579


>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
 gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
          Length = 659

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 254/636 (39%), Positives = 362/636 (56%), Gaps = 35/636 (5%)

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
           L+  YA C        +F    D +N V +  MI  Y  N      +  FR+M   G   
Sbjct: 59  LMRSYAACGEPGLTRKVFDEMSD-RNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRP 117

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
           + +T+P +L AC+      +G  +HG +L  G + N++V + LI MY KCG L  ARR+ 
Sbjct: 118 DNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVF 177

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
           +     + VSWNSM+ G+A      +AL + ++M     K D  T  S++   A      
Sbjct: 178 DEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVA------ 231

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
           N  S + L V+       FVN                      ++ K++ISW  +I    
Sbjct: 232 NTSSENVLYVEK-----IFVN----------------------LERKNLISWNVMIRVYM 264

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
            +    +A+  +  M    + PD +  +S+L AC +L+ L  G+++H    K   C +L 
Sbjct: 265 KNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLL 324

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
           ++NSL+ +YA+CGC++DA RVFD M  RDV +WT+LI      G+G  A+  + +ML  G
Sbjct: 325 LENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSG 384

Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
             PD I FV +L ACSH+GL +  R YF+ M   Y I P  +HYAC++DLLGR+G++ EA
Sbjct: 385 QAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEA 444

Query: 594 KALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTA 653
             ++ QM  EP+  VW  LLS+CRV  ++++G  AA+NL +L P  +  YV LSN+Y+ A
Sbjct: 445 YNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKA 504

Query: 654 GKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLI 713
           G+W++   +R +MK + IRK PG S VE N+QVH F++ D  HP   +IY ++  ++  +
Sbjct: 505 GRWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKM 564

Query: 714 KEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCH 773
           KE GYVP+ + ALH+VEEE KE  LA HSEKLA+ F LL   Q   IRI KNLRVCGDCH
Sbjct: 565 KELGYVPETDSALHDVEEEDKEGHLAVHSEKLAIVFALLN-TQEYQIRITKNLRVCGDCH 623

Query: 774 TAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            A K IS +  R II+RD+NRFHHFK G CSCGDYW
Sbjct: 624 IAAKLISKIVEREIIVRDTNRFHHFKDGVCSCGDYW 659



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 116/385 (30%), Positives = 182/385 (47%), Gaps = 34/385 (8%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           ++ +YA  G     +K+F+E   +N   ++ +I  Y N     +   +F +M   G+RP 
Sbjct: 59  LMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPD 118

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
            YT   VL+ CS    L+ G   HG  +K   D N FV  GL+ MY KC C+FEA  +F 
Sbjct: 119 NYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFD 178

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
                K+ V+W +M+ GY+ N     A+E  R+M   G + +  T  S++ A A  S+  
Sbjct: 179 EMI-WKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSS-- 235

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
                         E  +YV+   +++  K                 N +SWN MI  + 
Sbjct: 236 --------------ENVLYVEKIFVNLERK-----------------NLISWNVMIRVYM 264

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
           +     +A+ L+ +M    ++ D  T+ SVL        L   + +H  + K        
Sbjct: 265 KNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLL 324

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           + N+LIDMYA+ G LD A  VF+ M+ +DV SWTSLI+     G    A+  F++M  SG
Sbjct: 325 LENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSG 384

Query: 433 ICPDHVVVSSILSACAELTVLEFGQ 457
             PD +   +ILSAC+   +L+ G+
Sbjct: 385 QAPDSIAFVAILSACSHSGLLDEGR 409



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 165/363 (45%), Gaps = 27/363 (7%)

Query: 327 MHARDI-KIDDFTYPSVLNCFA-------SNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           M  RDI KI  F    +L  F         N D+   K +H++I          +   L+
Sbjct: 1   MIDRDICKIITFFIQQILTSFGLLAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLM 60

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
             YA  G       VF+ M D++V+ +  +I     +  Y++ L  F +M   G  PD+ 
Sbjct: 61  RSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNY 120

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
               +L AC+    L +G  +H   LK G   +L V N L+ +Y KCGC+ +A RVFD M
Sbjct: 121 TYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEM 180

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENAR 558
             +DV++W +++ G A N +  +AL+   +M   G KPD  T   L+ A ++   +EN  
Sbjct: 181 IWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTS-SENVL 239

Query: 559 WY---FESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG---EPDATVWKAL 612
           +    F ++++   I      +  MI +  ++    +A  L  QM     EPDA  + ++
Sbjct: 240 YVEKIFVNLERKNLIS-----WNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASV 294

Query: 613 LSACRVHGDLELGERAANNLFELEPMNAMPYVQLSN----MYSTAGKWEDAARVRKLMKS 668
           L AC     L LG R       +E     P + L N    MY+  G  +DA RV   MK 
Sbjct: 295 LPACGDLSALLLGRRIHE---YVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKF 351

Query: 669 RGI 671
           R +
Sbjct: 352 RDV 354



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 163/360 (45%), Gaps = 35/360 (9%)

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           ++H  I       N  +   L+  YA CG+    R++ +     N V +N MI  +    
Sbjct: 39  KLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNH 98

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
            + + L +F++M     + D++TYP VL   + + +L     +H  ++K G +   FV N
Sbjct: 99  RYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGN 158

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
            LI MY K G L  A  VF+ M  KDV+SW S++ G A++  +++AL+   +M   G  P
Sbjct: 159 GLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKP 218

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           D   ++S++ A A                      + S +N L +            ++F
Sbjct: 219 DGCTMASLMPAVA----------------------NTSSENVLYV-----------EKIF 245

Query: 496 DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAE 555
            ++  +++I+W  +I    +N    +A+  Y QM     +PD ITF  +L AC       
Sbjct: 246 VNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALL 305

Query: 556 NARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
             R   E ++K   + P       +ID+  R G L +AK + D+M    D   W +L+SA
Sbjct: 306 LGRRIHEYVEK-KKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFR-DVASWTSLISA 363



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/392 (23%), Positives = 177/392 (45%), Gaps = 58/392 (14%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G + +   D + F  N +IA Y   G L EA+++F+E  +K+  +W+S++ GY++     
Sbjct: 143 GDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFD 202

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           +A E+  +M+  G +P           C++  L+         A+      N        
Sbjct: 203 DALEICREMEDYGQKPDG---------CTMASLMP--------AVANTSSENVL------ 239

Query: 176 DMYAKCKCIFEAEYLFKMFP--DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
                        Y+ K+F   + KN ++W  MI  Y +N    +A++ +  M    VE 
Sbjct: 240 -------------YVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEP 286

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
           +  TF S+L AC  +SA   G ++H  +       N+ ++++LIDMYA+CG LD A+R+ 
Sbjct: 287 DAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVF 346

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
           +  +  +  SW S+I  +   G    A++LF +M       D   + ++L+  + +  L+
Sbjct: 347 DRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLD 406

Query: 354 NAKSVHSLIVKTGFEGYKFVNN-----ALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTS 407
             +    +  K   + Y+          L+D+  + G +D A+ +   M  + +   W +
Sbjct: 407 EGR----IYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWAT 462

Query: 408 LITGCAYHGSYEEALKYFSDMRISGICPDHVV 439
           L++ C          + F++M I  +  D+++
Sbjct: 463 LLSSC----------RVFTNMDIGILAADNLL 484


>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 244/582 (41%), Positives = 359/582 (61%), Gaps = 6/582 (1%)

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
            Q TF  ++ +CA  ++   G  VH  ++SSGF+ + ++ + LI+MY + G +D AR++ 
Sbjct: 77  TQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKVF 136

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNID- 351
           + +       WN++    A  G  KE L L+ +M+   I  D FTY  VL  C  S +  
Sbjct: 137 DETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSV 196

Query: 352 --LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
             L   K +H+ I++ G+E    V   L+D+YAK G++  A  VF  M  K+ +SW+++I
Sbjct: 197 SPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMI 256

Query: 410 TGCAYHGSYEEALKYFSDMRISG--ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG 467
              A +    +AL+ F  M +      P+ V + ++L ACA L  LE G+ +H   L+ G
Sbjct: 257 ACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRG 316

Query: 468 GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYD 527
             S L V N+L+ +Y +CG I    RVFD+M  RDV++W +LI     +G GK+A+Q ++
Sbjct: 317 LDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFE 376

Query: 528 QMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRS 587
            M+ +G+ P YI+F+ +L ACSHAGL E  +  FESM   Y I PG +HYACM+DLLGR+
Sbjct: 377 NMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRA 436

Query: 588 GKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLS 647
            +L EA  L++ M  EP  TVW +LL +CR+H ++EL ERA+  LFELEP NA  YV L+
Sbjct: 437 NRLDEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTLLFELEPRNAGNYVLLA 496

Query: 648 NMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKID 707
           ++Y+ A  W +A  V KL+++RG++K PGCSW+E   +V+ F+S D  +P   +I++ + 
Sbjct: 497 DIYAEAKMWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLV 556

Query: 708 EIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLR 767
           ++   +K  GYVP  N  L++++EE KE  +  HSEKLAVAFGL+   +G  IRI KNLR
Sbjct: 557 KLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTVKGETIRIRKNLR 616

Query: 768 VCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +C DCH   K+IS    R I++RD NRFHHFK G CSCGDYW
Sbjct: 617 LCEDCHAVTKFISKFANREILVRDVNRFHHFKDGVCSCGDYW 658



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 192/387 (49%), Gaps = 17/387 (4%)

Query: 47  SNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIY 106
           S S  +D   +L     D+D F    +I  Y   G +  A+K+F+ET  +  + W++L  
Sbjct: 93  SLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFR 152

Query: 107 GYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL----LQRGEQFHGYAIKT 162
             +  G   E  +L+ QM   G    ++T   VL+ C +  L    LQ+G++ H + ++ 
Sbjct: 153 ALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRH 212

Query: 163 CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIEC 222
            ++ N  V+T L+D+YAK   +  A  +F   P  KN V+W+ MI  +++N    KA+E 
Sbjct: 213 GYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPT-KNFVSWSAMIACFAKNEMPMKALEL 271

Query: 223 FRDMRVEGVES--NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
           F+ M +E  +S  N  T  ++L ACA ++A + G  +HG IL  G ++ + V +ALI MY
Sbjct: 272 FQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMY 331

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
            +CG++   +R+ +  +  + VSWNS+I  +   GF K+A+ +F+ M  +       ++ 
Sbjct: 332 GRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFI 391

Query: 341 SVLN-CFASNIDLNNAKSVHSLIVK----TGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
           +VL  C  + +         S++ K     G E Y      ++D+  +   LD A  +  
Sbjct: 392 TVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYA----CMVDLLGRANRLDEAIKLIE 447

Query: 396 LMQ-DKDVISWTSLITGCAYHGSYEEA 421
            M  +     W SL+  C  H + E A
Sbjct: 448 DMHFEPGPTVWGSLLGSCRIHCNVELA 474



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 116/252 (46%), Gaps = 35/252 (13%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++  G +  A  +F  M  ++  +W+ MIA +A            NE P K         
Sbjct: 228 YAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAK-----------NEMPMK--------- 267

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYR--PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC 163
                      A ELF  M LE +   P+  T+ NVL+ C+    L++G+  HGY ++  
Sbjct: 268 -----------ALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRG 316

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
            D    V+  L+ MY +C  I   + +F    + ++ V+W ++I+ Y  +G+G KAI+ F
Sbjct: 317 LDSILPVLNALITMYGRCGEILMGQRVFDNMKN-RDVVSWNSLISIYGMHGFGKKAIQIF 375

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAK 282
            +M  +G   +  +F ++L AC+     + G  +   +LS       +   + ++D+  +
Sbjct: 376 ENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGR 435

Query: 283 CGDLDSARRLLE 294
              LD A +L+E
Sbjct: 436 ANRLDEAIKLIE 447



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 50/114 (43%)

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           P       ++ +CA+   L  G  VH   + SG      +   L+ +Y + G I+ A +V
Sbjct: 76  PTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKV 135

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
           FD    R +  W AL    A  G GKE L  Y QM   G   D  T+  +L AC
Sbjct: 136 FDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKAC 189


>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
 gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g49142
 gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
          Length = 686

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 251/659 (38%), Positives = 367/659 (55%), Gaps = 39/659 (5%)

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGY 215
           H   I      N+ +   L+  YA  K +  A  +F   P+ +N +    MI  Y  NG+
Sbjct: 62  HSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPE-RNVIIINVMIRSYVNNGF 120

Query: 216 GFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSA 275
             + ++ F  M    V  + +TFP +L AC+       G ++HG     G  + ++V + 
Sbjct: 121 YGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNG 180

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           L+ MY KCG L  AR +L+     + VSWNS++VG+A+     +AL + ++M +  I  D
Sbjct: 181 LVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHD 240

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
             T  S+L        ++N  + + + VK              DM+ K G          
Sbjct: 241 AGTMASLLPA------VSNTTTENVMYVK--------------DMFFKMGK--------- 271

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
               K ++SW  +I     +    EA++ +S M   G  PD V ++S+L AC + + L  
Sbjct: 272 ----KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSL 327

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
           G+++H    +     +L ++N+L+ +YAKCGC+  A  VF++M +RDV++WTA+I     
Sbjct: 328 GKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGF 387

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
           +G+G +A+  + ++   G  PD I FV  L ACSHAGL E  R  F+ M   Y I P  +
Sbjct: 388 SGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLE 447

Query: 576 HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
           H ACM+DLLGR+GK+ EA   +  M  EP+  VW ALL ACRVH D ++G  AA+ LF+L
Sbjct: 448 HLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQL 507

Query: 636 EPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG 695
            P  +  YV LSN+Y+ AG+WE+   +R +MKS+G++K PG S VE N  +H F+  DR 
Sbjct: 508 APEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRS 567

Query: 696 HPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLP 755
           HP   +IY ++D ++  +KE GYVPD   ALH+VEEE KE  LA HSEKLA+ F L+   
Sbjct: 568 HPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTK 627

Query: 756 Q-----GAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +        IRI KNLR+CGDCH A K IS +  R II+RD+NRFH F+ G CSCGDYW
Sbjct: 628 EEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 200/443 (45%), Gaps = 36/443 (8%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           ++ AYA+   +  A+K+F+E P +N    + +I  Y N G   E  ++F  M     RP 
Sbjct: 80  LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
            YT   VL+ CS  G +  G + HG A K       FV  GLV MY KC  + EA  +  
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
                ++ V+W +++ GY+QN     A+E  R+M    +  +  T  S+L A +  +  +
Sbjct: 200 EMSR-RDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN 258

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
                            +YV+    DM+ K G               + VSWN MI  + 
Sbjct: 259 V----------------MYVK----DMFFKMGK-------------KSLVSWNVMIGVYM 285

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
           +     EA+ L+ +M A   + D  +  SVL        L+  K +H  I +        
Sbjct: 286 KNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL 345

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           + NALIDMYAK G L+ A  VF  M+ +DV+SWT++I+   + G   +A+  FS ++ SG
Sbjct: 346 LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSG 405

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCINDA 491
           + PD +   + L+AC+   +LE G+    +       +  L     +V +  + G + +A
Sbjct: 406 LVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEA 465

Query: 492 NRVFDSMHTR-DVITWTALIMGC 513
            R    M    +   W AL+  C
Sbjct: 466 YRFIQDMSMEPNERVWGALLGAC 488



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 154/328 (46%), Gaps = 13/328 (3%)

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           D+   ++VHS I+         +   L+  YA   ++  A  VF+ + +++VI    +I 
Sbjct: 54  DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
               +G Y E +K F  M    + PDH     +L AC+    +  G+++H    K G  S
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSS 173

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
           +L V N LV +Y KCG +++A  V D M  RDV++W +L++G AQN +  +AL+   +M 
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKL 590
           +     D  T   LL A S+    EN   Y + M    G K     +  MI +  ++   
Sbjct: 234 SVKISHDAGTMASLLPAVSNT-TTENV-MYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMP 290

Query: 591 IEAKALLDQMVG---EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLS 647
           +EA  L  +M     EPDA    ++L AC     L LG++       +E    +P + L 
Sbjct: 291 VEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGY---IERKKLIPNLLLE 347

Query: 648 N----MYSTAGKWEDAARVRKLMKSRGI 671
           N    MY+  G  E A  V + MKSR +
Sbjct: 348 NALIDMYAKCGCLEKARDVFENMKSRDV 375



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 155/362 (42%), Gaps = 41/362 (11%)

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           VH  I+      N  +   L+  YA   D+ SAR++ +     N +  N MI  +   GF
Sbjct: 61  VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
           + E + +F  M   +++ D +T+P VL   + +  +   + +H    K G     FV N 
Sbjct: 121 YGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNG 180

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           L+ MY K G L  A +V + M  +DV+SW SL+ G A +  +++AL+   +M    I  D
Sbjct: 181 LVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHD 240

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFD 496
              ++S+L A +  T  E    V  +F K G                             
Sbjct: 241 AGTMASLLPAVSN-TTTENVMYVKDMFFKMG----------------------------- 270

Query: 497 SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC---SHAGL 553
               + +++W  +I    +N    EA++ Y +M A G +PD ++   +L AC   S   L
Sbjct: 271 ---KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSL 327

Query: 554 AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
            +    Y E    +    P       +ID+  + G L +A+ + + M    D   W A++
Sbjct: 328 GKKIHGYIERKKLI----PNLLLENALIDMYAKCGCLEKARDVFENMKSR-DVVSWTAMI 382

Query: 614 SA 615
           SA
Sbjct: 383 SA 384



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 114/254 (44%), Gaps = 36/254 (14%)

Query: 58  LFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEA 117
           +F KM  +   +WN MI  Y                  KN               + +EA
Sbjct: 265 MFFKMGKKSLVSWNVMIGVY-----------------MKN--------------AMPVEA 293

Query: 118 FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
            EL+ +M+ +G+ P   ++ +VL  C     L  G++ HGY  +     N  +   L+DM
Sbjct: 294 VELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDM 353

Query: 178 YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
           YAKC C+ +A  +F+     ++ V+WT MI+ Y  +G G  A+  F  ++  G+  +   
Sbjct: 354 YAKCGCLEKARDVFENM-KSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIA 412

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ--SALIDMYAKCGDLDSARRLLEY 295
           F + L AC+     + G      +++  ++    ++  + ++D+  + G +  A R ++ 
Sbjct: 413 FVTTLAACSHAGLLEEGRSCFK-LMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQD 471

Query: 296 SEID-NEVSWNSMI 308
             ++ NE  W +++
Sbjct: 472 MSMEPNERVWGALL 485



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 88/216 (40%), Gaps = 39/216 (18%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI--YGYSNYGLDIEAFELFWQMQLEG 128
           N +I  YA  G L +A+ +F     ++  +W+++I  YG+S  G D  A  LF ++Q  G
Sbjct: 348 NALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCD--AVALFSKLQDSG 405

Query: 129 YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
             P        L  CS  GLL+ G        ++CF L       + D Y          
Sbjct: 406 LVPDSIAFVTTLAACSHAGLLEEG--------RSCFKL-------MTDHY---------- 440

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
              K+ P  ++      ++      G   K  E +R ++   +E N+  + ++L AC   
Sbjct: 441 ---KITPRLEHLACMVDLL------GRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVH 491

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
           S  D G      +     E + Y    L ++YAK G
Sbjct: 492 SDTDIGLLAADKLFQLAPEQSGY-YVLLSNIYAKAG 526


>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 665

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 234/575 (40%), Positives = 356/575 (61%), Gaps = 1/575 (0%)

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
           D+    + +++  + ++L  C        G  VH  IL S F  ++ + + L++MYAKCG
Sbjct: 50  DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109

Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
            L+ AR++ E     + V+W ++I G+++     +AL  F +M       ++FT  SV+ 
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
             A+         +H   VK GF+    V +AL+D+Y + G +D A +VF+ ++ ++ +S
Sbjct: 170 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229

Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
           W +LI G A     E+AL+ F  M   G  P H   +S+  AC+    LE G+ VHA  +
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 289

Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ 524
           KSG        N+L+ +YAK G I+DA ++FD +  RDV++W +L+   AQ+G GKEA+ 
Sbjct: 290 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVW 349

Query: 525 FYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLL 584
           ++++M   G +P+ I+F+ +L ACSH+GL +    Y+E M K  GI P   HY  ++DLL
Sbjct: 350 WFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLL 408

Query: 585 GRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYV 644
           GR+G L  A   +++M  EP A +WKALL+ACR+H + ELG  AA ++FEL+P +  P+V
Sbjct: 409 GRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHV 468

Query: 645 QLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYS 704
            L N+Y++ G+W DAARVRK MK  G++KEP CSWVE  + +H+F++ D  HP R +I  
Sbjct: 469 ILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIAR 528

Query: 705 KIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFK 764
           K +E++  IKE GYVPD +  + +V+++ +E+ L YHSEK+A+AF LL  P G+ I I K
Sbjct: 529 KWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKK 588

Query: 765 NLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFK 799
           N+RVCGDCHTA+K  S V  R II+RD+NRFHHFK
Sbjct: 589 NIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFK 623



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 132/391 (33%), Positives = 215/391 (54%), Gaps = 4/391 (1%)

Query: 126 LEG-YRPSQYTLDN-VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           LEG Y P+     N +L+ C++  LL +G   H + +++ F  +  +   L++MYAKC  
Sbjct: 51  LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + EA  +F+  P  ++ V WTT+I+GYSQ+     A+  F  M   G   N+FT  S++ 
Sbjct: 111 LEEARKVFEKMPQ-RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           A AA      G Q+HG  +  GF++NV+V SAL+D+Y + G +D A+ + +  E  N+VS
Sbjct: 170 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN++I G AR+   ++AL LF+ M     +   F+Y S+    +S   L   K VH+ ++
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 289

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K+G +   F  N L+DMYAK G++  A  +F+ +  +DV+SW SL+T  A HG  +EA+ 
Sbjct: 290 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVW 349

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
           +F +MR  GI P+ +   S+L+AC+   +L+ G   + +  K G         ++V +  
Sbjct: 350 WFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLG 409

Query: 484 KCGCINDANRVFDSMHTRDVIT-WTALIMGC 513
           + G +N A R  + M        W AL+  C
Sbjct: 410 RAGDLNRALRFIEEMPIEPTAAIWKALLNAC 440



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 207/383 (54%), Gaps = 12/383 (3%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           NT++  YA  G L EA+K+F + P ++F TW++LI GYS +    +A   F QM   GY 
Sbjct: 99  NTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYS 158

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+++TL +V++  + +     G Q HG+ +K  FD N  V + L+D+Y +   + +A+ +
Sbjct: 159 PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLV 218

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F    + +N V+W  +I G+++     KA+E F+ M  +G   + F++ S+  AC++   
Sbjct: 219 FDAL-ESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGF 277

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            + G  VH  ++ SG +   +  + L+DMYAK G +  AR++ +     + VSWNS++  
Sbjct: 278 LEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTA 337

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF--E 368
           +A+ GF KEA+  F++M    I+ ++ ++ SVL   + +  L+     + L+ K G   E
Sbjct: 338 YAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPE 397

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEALKYFSD 427
            + +V   ++D+  + G+L+ A      M  +   + W +L+  C  H + E  L  ++ 
Sbjct: 398 AWHYVT--VVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE--LGAYAA 453

Query: 428 MRISGICPD----HVVVSSILSA 446
             +  + PD    HV++ +I ++
Sbjct: 454 EHVFELDPDDPGPHVILYNIYAS 476



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 28/217 (12%)

Query: 417 SYEEALKYFS----------DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
           S +E+LK+ S          D+  S I  D    +++L  C    +L  G+ VHA  L+S
Sbjct: 30  SEDESLKFPSNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQS 89

Query: 467 GGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFY 526
                + + N+L+ +YAKCG + +A +VF+ M  RD +TWT LI G +Q+ +  +AL F+
Sbjct: 90  IFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFF 149

Query: 527 DQMLARGTKPDYITFVGLLFA--------CSHAGLAENARWYFESMDKVYGIKPGPDHYA 578
           +QML  G  P+  T   ++ A        C H       +  F+S   V          +
Sbjct: 150 NQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV---------GS 200

Query: 579 CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
            ++DL  R G + +A+ + D +    D + W AL++ 
Sbjct: 201 ALLDLYTRYGLMDDAQLVFDALESRNDVS-WNALIAG 236



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 67/143 (46%)

Query: 67  GFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL 126
            F  NT++  YA SG + +A+K+F+    ++  +W+SL+  Y+ +G   EA   F +M+ 
Sbjct: 297 AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRR 356

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
            G RP++ +  +VL  CS  GLL  G  ++    K      A+    +VD+  +   +  
Sbjct: 357 VGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNR 416

Query: 187 AEYLFKMFPDGKNHVAWTTMITG 209
           A    +  P       W  ++  
Sbjct: 417 ALRFIEEMPIEPTAAIWKALLNA 439


>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 657

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 240/592 (40%), Positives = 360/592 (60%), Gaps = 8/592 (1%)

Query: 226 MRVEGVESN--QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
           +RV   ES+  Q T+  ++  C   S+   G +VH  IL +G + + ++ + LI MY+  
Sbjct: 66  LRVLSQESSPSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDL 125

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
           G +D AR++ + +       WN++       G  +E L L+ KM+   ++ D FTY  VL
Sbjct: 126 GSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVL 185

Query: 344 N-CFASNID---LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
             C AS      L   K +H+ + + G+  + ++   L+DMYA+ G +D A  VFN M  
Sbjct: 186 KACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPV 245

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDM--RISGICPDHVVVSSILSACAELTVLEFGQ 457
           ++V+SW+++I   A +G   EAL+ F +M        P+ V + S+L ACA L  LE G+
Sbjct: 246 RNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGR 305

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
            +H   L+ G  S L V ++LV +Y +CG ++   RVFD MH RDV++W +LI     +G
Sbjct: 306 LIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHG 365

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY 577
            G++A+Q +++MLA G  P  +TFV +L ACSH GL E  +  FESM + +GIKP  +HY
Sbjct: 366 YGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHY 425

Query: 578 ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEP 637
           ACM+DLLGR+ +L EA  ++  M  EP   VW +LL +CR+HG++EL ERA+  LF LEP
Sbjct: 426 ACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEP 485

Query: 638 MNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHP 697
            NA  YV L+++Y+ A  W++  RV+KL++ RG++K PG  W+E   +++ F+S D  +P
Sbjct: 486 KNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSMDEFNP 545

Query: 698 LRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQG 757
           L   I++ + ++   +KE GY+P     L+ +E E KE  +  HSEKLA+AFGL+   +G
Sbjct: 546 LMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKG 605

Query: 758 APIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            PIRI KNLR+C DCH   K+IS    + I++RD NRFH FK G CSCGDYW
Sbjct: 606 EPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 192/373 (51%), Gaps = 9/373 (2%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
            + +  SD+D F    +I  Y++ G +  A+K+F++T  +  + W++L    +  G   E
Sbjct: 102 HILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEE 161

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL----LQRGEQFHGYAIKTCFDLNAFVVT 172
              L+W+M   G    ++T   VL+ C         L +G++ H +  +  ++ + +++T
Sbjct: 162 VLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMT 221

Query: 173 GLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
            LVDMYA+  C+  A Y+F   P  +N V+W+ MI  Y++NG  F+A+  FR+M  E  +
Sbjct: 222 TLVDMYARFGCVDYASYVFNGMPV-RNVVSWSAMIACYAKNGKAFEALRTFREMMTETKD 280

Query: 233 S--NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           S  N  T  S+L ACA+++A + G  +HG IL  G ++ + V SAL+ MY +CG LD  +
Sbjct: 281 SSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQ 340

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASN 349
           R+ +     + VSWNS+I  +   G+ ++A+ +F++M A        T+ SVL  C    
Sbjct: 341 RVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEG 400

Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD-CAFMVFNLMQDKDVISWTSL 408
           +     +   S+    G +        ++D+  +   LD  A MV ++  +     W SL
Sbjct: 401 LVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSL 460

Query: 409 ITGCAYHGSYEEA 421
           +  C  HG+ E A
Sbjct: 461 LGSCRIHGNVELA 473



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 77/355 (21%), Positives = 124/355 (34%), Gaps = 76/355 (21%)

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
           ++++L + +G  G K  NN LI    K+G L  A  V +        ++  LI  C +  
Sbjct: 33  ALNNLSISSG-AGAKISNNQLIQSLCKEGKLKQALRVLSQESSPSQQTYELLILCCGHRS 91

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
           S  + L+                                   VH   L +G      +  
Sbjct: 92  SLSDGLR-----------------------------------VHRHILDNGSDQDPFLAT 116

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
            L+ +Y+  G ++ A +VFD    R +  W AL       G G+E L  Y +M   G + 
Sbjct: 117 KLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVES 176

Query: 537 DYITFVGLLFACS---------------HAGLAE---NARWYFESM-------------- 564
           D  T+  +L AC                HA L     N+  Y  +               
Sbjct: 177 DRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYA 236

Query: 565 DKVYGIKPGPD--HYACMIDLLGRSGKLIEAKALLDQMVGE-----PDATVWKALLSACR 617
             V+   P  +   ++ MI    ++GK  EA     +M+ E     P++    ++L AC 
Sbjct: 237 SYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACA 296

Query: 618 VHGDLELGERAANNLFELEPMNAMPYVQ-LSNMYSTAGKWEDAARVRKLMKSRGI 671
               LE G      +      + +P +  L  MY   GK +   RV   M  R +
Sbjct: 297 SLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDV 351



 Score = 46.6 bits (109), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 31/110 (28%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +   G++D   ++F++M DRD  +WN++I++Y                           +
Sbjct: 330 YGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYG--------------------------V 363

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
           +GY       +A ++F +M   G  P+  T  +VL  CS +GL++ G++ 
Sbjct: 364 HGYGR-----KAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRL 408


>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
 gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
          Length = 627

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 231/556 (41%), Positives = 352/556 (63%), Gaps = 1/556 (0%)

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           G Q+H  I+ SG +    V   LI+ Y+K      + ++ E SE  +  +W+S+I  FA+
Sbjct: 73  GQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVISSFAQ 132

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
                 A+  F +M   ++  DD  +PS     A     +  KSVH L++KTG++   FV
Sbjct: 133 NEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVFV 192

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
            ++L+DMYAK G++  A  VF+ M  ++V+SW+ +I G    G +EEA++ F +  + G+
Sbjct: 193 GSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGL 252

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
             +   +SS++  C   T+LE G+Q+H +  K+    S  V +SL+ +Y+KCG I  A R
Sbjct: 253 DVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGAYR 312

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGL 553
           VFD +  +++  W A+++ CAQ+   KEA   + +M   G +P++ITF+ +L+ACSHAGL
Sbjct: 313 VFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACSHAGL 372

Query: 554 AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
            E  + YF  M K Y I+PG  HYA M+DLLGR+GKL EA +++  M  EP  +VW A +
Sbjct: 373 VEEGKKYFALMKK-YEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTESVWGAFI 431

Query: 614 SACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRK 673
           + CR+HG+ +L   AA+ +FEL  +++  +V LSN Y+ AG++EDAA+ RK+++ RG++K
Sbjct: 432 TGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAGRYEDAAKARKMLRDRGVKK 491

Query: 674 EPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEG 733
           E G SW+E  ++VH F + DR H    +IY K++++   ++ AGYV D +F L  V  E 
Sbjct: 492 ETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLEDLGEEMERAGYVADTSFVLREVGSEE 551

Query: 734 KEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSN 793
           K   + YHSE+LA+AFGL+++P G PIRI KNLRVCGDCH A+K+IS +  R II+RD+N
Sbjct: 552 KNQTIRYHSERLAIAFGLISIPLGRPIRIMKNLRVCGDCHNAIKFISKLSGRVIIVRDNN 611

Query: 794 RFHHFKAGNCSCGDYW 809
           RFH F+ G CSC DYW
Sbjct: 612 RFHRFEDGKCSCADYW 627



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 196/370 (52%), Gaps = 2/370 (0%)

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
           L +G+Q H + IK+   +   V   L++ Y+K +    +  +F+   + K+   W+++I+
Sbjct: 70  LLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEE-SERKSSTTWSSVIS 128

Query: 209 GYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEA 268
            ++QN     AI+ F  M  E +  +   FPS   ACA +   D G  VH  ++ +G++ 
Sbjct: 129 SFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDV 188

Query: 269 NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH 328
           +V+V S+L+DMYAKCGD+  AR + +     N VSW+ MI G+ + G H+EA+ LFK+  
Sbjct: 189 DVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEAL 248

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD 388
              + ++DFT  SV+    S   L   K +H L  KT ++   FV ++LI +Y+K G ++
Sbjct: 249 LEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIE 308

Query: 389 CAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
            A+ VF+ +  K++  W +++  CA H   +EA   F+ M  +G+ P+ +    +L AC+
Sbjct: 309 GAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACS 368

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT-WT 507
              ++E G++  A+  K           S+V +  + G + +A  V   M T    + W 
Sbjct: 369 HAGLVEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTESVWG 428

Query: 508 ALIMGCAQNG 517
           A I GC  +G
Sbjct: 429 AFITGCRIHG 438



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 175/337 (51%), Gaps = 2/337 (0%)

Query: 86  AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL 145
           + ++F E+  K+  TWSS+I  ++     + A + F +M  E   P  +   +  + C++
Sbjct: 108 SSQVFEESERKSSTTWSSVISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAI 167

Query: 146 KGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTT 205
            G    G+  H   IKT +D++ FV + LVDMYAKC  I EA  +F   P  +N V+W+ 
Sbjct: 168 LGRCDVGKSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPH-RNVVSWSG 226

Query: 206 MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
           MI GY+Q G   +A+  F++  +EG++ N FT  S++  C + +  + G Q+HG    + 
Sbjct: 227 MIYGYTQLGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTS 286

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
           ++ + +V S+LI +Y+KCG ++ A R+ +   I N   WN+M++  A+    KEA  LF 
Sbjct: 287 YDLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFT 346

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           KM    ++ +  T+  VL   +    +   K   +L+ K   E       +++D+  + G
Sbjct: 347 KMENAGMRPNFITFLCVLYACSHAGLVEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAG 406

Query: 386 NLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEA 421
            L  A  V   M  +   S W + ITGC  HG+ + A
Sbjct: 407 KLQEALSVIKGMPTEPTESVWGAFITGCRIHGNTDLA 443



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 127/248 (51%), Gaps = 2/248 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D F  ++++  YA  G ++EA+ +F+E P +N  +WS +IYGY+  G   EA  LF +
Sbjct: 187 DVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKE 246

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
             LEG   + +TL +V+R+C    LL+ G+Q HG   KT +DL+ FV + L+ +Y+KC  
Sbjct: 247 ALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGL 306

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I  A  +F   P  KN   W  M+   +Q+ +  +A + F  M   G+  N  TF  +L 
Sbjct: 307 IEGAYRVFDEVPI-KNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLY 365

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEV 302
           AC+     + G +    +     E      ++++D+  + G L  A  +++    +  E 
Sbjct: 366 ACSHAGLVEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTES 425

Query: 303 SWNSMIVG 310
            W + I G
Sbjct: 426 VWGAFITG 433



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 159/335 (47%), Gaps = 23/335 (6%)

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
           L   + +H+ I+K+G +    V + LI+ Y+K      +  VF   + K   +W+S+I+ 
Sbjct: 70  LLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVISS 129

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
            A +     A++YF  M    +CPD  +  S   ACA L   + G+ VH + +K+G    
Sbjct: 130 FAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVD 189

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
           + V +SLV +YAKCG I +A  VFD M  R+V++W+ +I G  Q G+ +EA++ + + L 
Sbjct: 190 VFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALL 249

Query: 532 RGTKPDYITFVGLLFACSHAGLAENARWY----FESMDKVYGIKPGPDHYACMIDLLGRS 587
            G   +  T   ++  C  A L E  +      F++   + G        + +I L  + 
Sbjct: 250 EGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVG-----SSLISLYSKC 304

Query: 588 GKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFE------LEPMNAM 641
           G LIE    +   V   +  +W A+L AC  H       + A +LF       + P N +
Sbjct: 305 G-LIEGAYRVFDEVPIKNLGMWNAMLIACAQHAH----TKEAFDLFTKMENAGMRP-NFI 358

Query: 642 PYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPG 676
            ++ +    S AG  E+  +   LMK   I  EPG
Sbjct: 359 TFLCVLYACSHAGLVEEGKKYFALMKKYEI--EPG 391



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 76/159 (47%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G  F+   D  GF  +++I+ Y+  G +  A ++F+E P KN   W++++   + +    
Sbjct: 280 GLCFKTSYDLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTK 339

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EAF+LF +M+  G RP+  T   VL  CS  GL++ G+++     K   +        +V
Sbjct: 340 EAFDLFTKMENAGMRPNFITFLCVLYACSHAGLVEEGKKYFALMKKYEIEPGTQHYASMV 399

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
           D+  +   + EA  + K  P       W   ITG   +G
Sbjct: 400 DLLGRAGKLQEALSVIKGMPTEPTESVWGAFITGCRIHG 438


>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 993

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 254/726 (34%), Positives = 409/726 (56%), Gaps = 3/726 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N++I  + N  R+++A++LF+    ++  +W+++I  YS+  +  + F +   M+    +
Sbjct: 184 NSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVK 243

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P   TL +++ +C+   L+  G   H   + +    +  ++  LV+MY+    + EAE L
Sbjct: 244 PDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESL 303

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF-RDMRVEGVESNQFTFPSILTACAAVS 249
           F+     ++ ++W TMI+ Y Q+    +A+E   + ++ +    N  TF S L AC++  
Sbjct: 304 FRNMSR-RDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPE 362

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
           A   G  +H  IL    +  + + ++L+ MY+KC  ++   R+ E     + VS N +  
Sbjct: 363 ALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTG 422

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN-AKSVHSLIVKTGFE 368
           G+A       A+ +F  M    IK +  T  ++     S  DL++    +H+ + +TG  
Sbjct: 423 GYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLL 482

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
             +++ N+LI MYA  G+L+ +  +F+ + +K VISW ++I     HG  EEA+K F D 
Sbjct: 483 SDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDS 542

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
           + +G   D   ++  LS+ A L  LE G Q+H + +K+G      V N+ + +Y KCG +
Sbjct: 543 QHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKM 602

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
           +   +       R    W  LI G A+ G  KEA   +  M++ G KPDY+TFV LL AC
Sbjct: 603 DCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSAC 662

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           SHAGL +    Y+ SM   +G+ PG  H  C++DLLGR GK  EA+  +D+M   P+  +
Sbjct: 663 SHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLI 722

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           W++LLS+ R H +L++G +AA NL EL+P +   YV LSN+Y+T  +W D  ++R  MK+
Sbjct: 723 WRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKT 782

Query: 669 RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHN 728
             + K P CSW++  ++V  F   DR H     IY K+DEI+L ++E GYV D + ALH+
Sbjct: 783 IKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLREVGYVADTSSALHD 842

Query: 729 VEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHII 788
            +EE KE  L  HSEKLA+A+GLL +P+G+ IRIFKNLRVC DCH   K +S V+ R I+
Sbjct: 843 TDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRIFKNLRVCADCHLVFKLVSMVFHREIV 902

Query: 789 LRDSNR 794
           LRD  R
Sbjct: 903 LRDPYR 908



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 157/610 (25%), Positives = 277/610 (45%), Gaps = 41/610 (6%)

Query: 56  GQLFEKMSDRDGFTWNTMIAA-----YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSN 110
           G     ++ R G   N  I       Y + G +  A++LF E P +N  +W++++   S+
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSS 122

Query: 111 YGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV 170
            G   EA   + +M+ EG   +   L  V+ LC        G Q   + + +    +  V
Sbjct: 123 NGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSV 182

Query: 171 VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG 230
              L+ M+   + + +AE LF    + ++ ++W  MI+ YS      K      DMR   
Sbjct: 183 ANSLITMFGNLRRVQDAERLFDRMEE-RDRISWNAMISMYSHEEVYSKCFIVLSDMRHGE 241

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           V+ +  T  S+++ CA+      G+ +H   +SSG   +V + +AL++MY+  G LD A 
Sbjct: 242 VKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAE 301

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEAL-SLFKKMHARDIKIDDFTYPSVLNCFASN 349
            L       + +SWN+MI  + +     EAL +L + +   +   +  T+ S L   +S 
Sbjct: 302 SLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSP 361

Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
             L N +++H++I++   +    + N+L+ MY+K  +++    VF  M   DV+S   L 
Sbjct: 362 EALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLT 421

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLE-FGQQVHAVFLKSGG 468
            G A       A++ FS MR +GI P+++ + ++   C  L  L  +G  +HA   ++G 
Sbjct: 422 GGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGL 481

Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
            S   + NSL+ +YA CG +  +  +F  ++ + VI+W A+I    ++G+G+EA++ +  
Sbjct: 482 LSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMD 541

Query: 529 MLARGTKPDYITFVGLLFACSH-AGLAENARWYFES------------------------ 563
               G K D       L + ++ A L E  + +  S                        
Sbjct: 542 SQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGK 601

Query: 564 MDKVYGIKPGPDH-----YACMIDLLGRSGKLIEAKALLDQMVG---EPDATVWKALLSA 615
           MD +    P P H     +  +I    R G   EA+     MV    +PD   + ALLSA
Sbjct: 602 MDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSA 661

Query: 616 CRVHGDLELG 625
           C   G ++ G
Sbjct: 662 CSHAGLIDKG 671



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 223/463 (48%), Gaps = 5/463 (1%)

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQR-- 151
           P +   +W + + G +  GL+  AF L   M+      S + L +++  C  +G  +   
Sbjct: 2   PHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAA 61

Query: 152 -GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
            G   H    +     N ++ T L+ +Y     +  A+ LF   P  +N V+WT ++   
Sbjct: 62  CGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQ-RNVVSWTAIMVAL 120

Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV 270
           S NG   +A+  +R MR EGV  N     ++++ C A+     G QV   ++ SG   +V
Sbjct: 121 SSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHV 180

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
            V ++LI M+     +  A RL +  E  + +SWN+MI  ++ +  + +   +   M   
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHG 240

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
           ++K D  T  S+++  AS+  +     +HSL V +G      + NAL++MY+  G LD A
Sbjct: 241 EVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEA 300

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD-MRISGICPDHVVVSSILSACAE 449
             +F  M  +DVISW ++I+      S  EAL+     ++     P+ +  SS L AC+ 
Sbjct: 301 ESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSS 360

Query: 450 LTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTAL 509
              L  G+ +HA+ L+    + L + NSL+ +Y+KC  + D  RVF+SM   DV++   L
Sbjct: 361 PEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVL 420

Query: 510 IMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
             G A       A++ +  M   G KP+YIT + L   C   G
Sbjct: 421 TGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLG 463



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 202/442 (45%), Gaps = 39/442 (8%)

Query: 20  IGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYA 78
           +G   ++  V + +  +  L  ALV+ +S +G++DEA  LF  MS RD  +WNTMI++Y 
Sbjct: 264 LGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYV 323

Query: 79  NSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ-MQLEGYRPSQYTLD 137
            S                                  +EA E   Q +Q +   P+  T  
Sbjct: 324 QSNSC-------------------------------VEALETLGQLLQTDEGPPNSMTFS 352

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           + L  CS    L  G   H   ++        +   L+ MY+KC  + + E +F+  P  
Sbjct: 353 SALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMP-C 411

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS-ARDFGAQ 256
            + V+   +  GY+       A+  F  MR  G++ N  T  ++   C ++     +G  
Sbjct: 412 YDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMP 471

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE--VSWNSMIVGFARQ 314
           +H  +  +G  ++ Y+ ++LI MYA CGDL+S+  +  +S I+N+  +SWN++I    R 
Sbjct: 472 LHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGI--FSRINNKSVISWNAIIAANVRH 529

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
           G  +EA+ LF        K+D F     L+  A+   L     +H L VK G +    V 
Sbjct: 530 GRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVV 589

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           NA +DMY K G +DC          +    W +LI+G A +G ++EA   F  M   G  
Sbjct: 590 NATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQK 649

Query: 435 PDHVVVSSILSACAELTVLEFG 456
           PD+V   ++LSAC+   +++ G
Sbjct: 650 PDYVTFVALLSACSHAGLIDKG 671



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 179/361 (49%), Gaps = 4/361 (1%)

Query: 202 AWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD---FGAQVH 258
           +W T ++G ++ G    A    R MR   V  + F   S++TAC     ++    GA +H
Sbjct: 8   SWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACGAAIH 67

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
                +G   NVY+ +AL+ +Y   G + +A+RL       N VSW +++V  +  G  +
Sbjct: 68  ALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCME 127

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           EAL  +++M    +  +     +V++   +  D      V + +V +G   +  V N+LI
Sbjct: 128 EALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLI 187

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
            M+     +  A  +F+ M+++D ISW ++I+  ++   Y +     SDMR   + PD  
Sbjct: 188 TMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVT 247

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
            + S++S CA   ++  G  +H++ + SG   S+ + N+LV +Y+  G +++A  +F +M
Sbjct: 248 TLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNM 307

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT-KPDYITFVGLLFACSHAGLAENA 557
             RDVI+W  +I    Q+    EAL+   Q+L      P+ +TF   L ACS      N 
Sbjct: 308 SRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNG 367

Query: 558 R 558
           R
Sbjct: 368 R 368



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 143/302 (47%), Gaps = 17/302 (5%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +  N++I  YA  G L  +  +F+    K+  +W+++I     +G   EA +LF   Q
Sbjct: 484 DEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQ 543

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G +  ++ L   L   +    L+ G Q HG ++K   D ++ VV   +DMY KC    
Sbjct: 544 HAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCG--- 600

Query: 186 EAEYLFKMFPDGKNHVA--WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + + + K  PD  +     W T+I+GY++ GY  +A + F+ M   G + +  TF ++L+
Sbjct: 601 KMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLS 660

Query: 244 ACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLL-EYSEIDNE 301
           AC+     D G   +  +  + G    +     ++D+  + G    A + + E   + N+
Sbjct: 661 ACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPND 720

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF---TYPSVLNCFASN---IDLNNA 355
           + W S++   +    HK  L + +K     +++D F    Y  + N +A+N   +D++  
Sbjct: 721 LIWRSLL---SSSRTHKN-LDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKL 776

Query: 356 KS 357
           +S
Sbjct: 777 RS 778



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 7/176 (3%)

Query: 39  LNRALVDFSNSGEIDEAGQL----FEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP 94
           L   L   +N   ++E  QL     +   D D    N  +  Y   G++    K   +  
Sbjct: 554 LAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPA 613

Query: 95  FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ 154
            +    W++LI GY+ YG   EA + F  M   G +P   T   +L  CS  GL+ +G  
Sbjct: 614 HRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMD 673

Query: 155 FHGYAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
           ++     T F ++  +     +VD+  +     EAE      P   N + W ++++
Sbjct: 674 YYNSMAPT-FGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLS 728


>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera]
 gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 255/695 (36%), Positives = 396/695 (56%), Gaps = 37/695 (5%)

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY---LFKMFPDGKNHVAWTT 205
           L   +Q H   +++  D +  ++  LV   + C      +Y   +F + P  + H+    
Sbjct: 36  LTHLKQVHAQILRSKLDRSTSLLVKLV--ISSCALSSSLDYALSVFNLIPKPETHLC-NR 92

Query: 206 MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
            +   S++    K +  +  MR +G+  ++F+FP +L A + V +   G ++HG     G
Sbjct: 93  FLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLG 152

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
           F+++ +VQ+ L+ MYA CG +  AR + +     + V+W+ MI G+ + G   +AL LF+
Sbjct: 153 FDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFE 212

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           +M   +++ D+    +VL+      +L+  K +H  I++        + +AL+ MYA  G
Sbjct: 213 EMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCG 272

Query: 386 NLDCAF-------------------------------MVFNLMQDKDVISWTSLITGCAY 414
           ++D A                                 VFN M  KD++ W+++I+G A 
Sbjct: 273 SMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAE 332

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
             S +EAL  F++M+  GI PD V + S+++ACA L  L+  + +H    K+G   +L +
Sbjct: 333 SDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPI 392

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
           +N+L+ +YAKCG +  A R+FD M  ++VI+WT +I   A +G    AL+F+ QM     
Sbjct: 393 NNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENI 452

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAK 594
           +P+ ITFVG+L+ACSHAGL E  R  F SM   + I P   HY CM+DL GR+  L EA 
Sbjct: 453 EPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREAL 512

Query: 595 ALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAG 654
            L++ M   P+  +W +L++ACRVHG++ELGE AA  L EL+P +   +V LSN+Y+ A 
Sbjct: 513 ELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKAR 572

Query: 655 KWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIK 714
           +WED  +VRKLMK +GI KE GCS  E N+++H F+  DR H    +IY K+ E++  +K
Sbjct: 573 RWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKLYEVVSKLK 632

Query: 715 EAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHT 774
             GY P+    L ++EEE K+  + +HSEKLA+ +GL+    G+ IRI KNLRVC DCHT
Sbjct: 633 LVGYSPNTCSILVDLEEEEKKEVVLWHSEKLALCYGLMRDGTGSCIRIIKNLRVCEDCHT 692

Query: 775 AMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            +K  S VY R I++RD  RFHH+K G CSC DYW
Sbjct: 693 FIKLASKVYEREIVVRDRTRFHHYKDGVCSCKDYW 727



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 149/498 (29%), Positives = 240/498 (48%), Gaps = 36/498 (7%)

Query: 55  AGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLD 114
           A  L  K+          +I++ A S  L  A  +FN  P       +  +   S     
Sbjct: 44  AQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELSRSEEP 103

Query: 115 IEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
            +   ++ +M+ +G    +++   +L+  S    L  G + HG A K  FD + FV TGL
Sbjct: 104 EKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGL 163

Query: 175 VDMYAKCKCIFEAEYLF-KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
           V MYA C  I EA  +F KMF   ++ V W+ MI GY Q+G    A+  F +M+   VE 
Sbjct: 164 VRMYAACGRIAEARLMFDKMF--HRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEP 221

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
           ++    ++L+AC       +G  +H  I+ +    + ++QSAL+ MYA CG +D A  L 
Sbjct: 222 DEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLF 281

Query: 294 E----------------YS---EIDNE------------VSWNSMIVGFARQGFHKEALS 322
           E                YS   +I+N             V W++MI G+A     +EAL+
Sbjct: 282 EKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALN 341

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYA 382
           LF +M +  IK D  T  SV+   A    L+ AK +H  + K GF G   +NNALI+MYA
Sbjct: 342 LFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYA 401

Query: 383 KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
           K G+L+ A  +F+ M  K+VISWT +I+  A HG    AL++F  M    I P+ +    
Sbjct: 402 KCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVG 461

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD-NSLVLVYAKCGCINDANRVFDSMH-T 500
           +L AC+   ++E G+++    +     +   V    +V ++ +   + +A  + ++M   
Sbjct: 462 VLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLA 521

Query: 501 RDVITWTALIMGCAQNGK 518
            +VI W +L+  C  +G+
Sbjct: 522 PNVIIWGSLMAACRVHGE 539



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 207/455 (45%), Gaps = 44/455 (9%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D F    ++  YA  GR+ EA+ +F++   ++  TWS +I GY   GL  +A  LF +
Sbjct: 154 DSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEE 213

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+     P +  L  VL  C   G L  G+  H + ++    ++  + + LV MYA C  
Sbjct: 214 MKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGS 273

Query: 184 IFEAEYLF-KMFPDG-----------------------------KNHVAWTTMITGYSQN 213
           +  A  LF KM P                               K+ V W+ MI+GY+++
Sbjct: 274 MDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAES 333

Query: 214 GYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
               +A+  F +M+  G++ +Q T  S++TACA + A D    +H  +  +GF   + + 
Sbjct: 334 DSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPIN 393

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
           +ALI+MYAKCG L+ ARR+ +     N +SW  MI  FA  G    AL  F +M   +I+
Sbjct: 394 NALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIE 453

Query: 334 IDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM 392
            +  T+  VL  C  + +     K  +S+I +            ++D++ +   L  A  
Sbjct: 454 PNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALE 513

Query: 393 VFNLMQ-DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD----HVVVSSILSAC 447
           +   M    +VI W SL+  C  HG  E  L  F+  R+  + PD    HV +S+I +  
Sbjct: 514 LVEAMPLAPNVIIWGSLMAACRVHGEIE--LGEFAAKRLLELDPDHDGAHVFLSNIYAKA 571

Query: 448 AELTVLEFGQ----QVHAVFLKSGGCSSLSVDNSL 478
                 + GQ      H    K  GCS   ++N +
Sbjct: 572 RRWE--DVGQVRKLMKHKGISKERGCSRFELNNEI 604



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/457 (24%), Positives = 214/457 (46%), Gaps = 37/457 (8%)

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL-IDMYAKCGDLDSARRLLEYSEI 298
           ++ +A ++ ++     QVH  IL S  + +  +   L I   A    LD A  +      
Sbjct: 25  TLFSALSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPK 84

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
                 N  +   +R    ++ L ++++M  + + +D F++P +L   +    L     +
Sbjct: 85  PETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEI 144

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           H L  K GF+   FV   L+ MYA  G +  A ++F+ M  +DV++W+ +I G    G +
Sbjct: 145 HGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLF 204

Query: 419 EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSL 478
            +AL  F +M+   + PD +++S++LSAC     L +G+ +H   +++       + ++L
Sbjct: 205 NDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSAL 264

Query: 479 VLVYAKCGC-------------------------------INDANRVFDSMHTRDVITWT 507
           V +YA CG                                I +A  VF+ M  +D++ W+
Sbjct: 265 VTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWS 324

Query: 508 ALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKV 567
           A+I G A++   +EAL  +++M + G KPD +T + ++ AC+H G  + A+W    +DK 
Sbjct: 325 AMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDK- 383

Query: 568 YGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGER 627
            G          +I++  + G L  A+ + D+M    +   W  ++SA  +HGD     R
Sbjct: 384 NGFGGALPINNALIEMYAKCGSLERARRIFDKM-PRKNVISWTCMISAFAMHGDAGSALR 442

Query: 628 AANNLFE--LEPMNAMPYVQLSNMYSTAGKWEDAARV 662
             + + +  +EP N + +V +    S AG  E+  ++
Sbjct: 443 FFHQMEDENIEP-NGITFVGVLYACSHAGLVEEGRKI 478



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 141/288 (48%), Gaps = 4/288 (1%)

Query: 31  NSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKL 89
           N++     L  ALV  +++ G +D A  LFEKM+ ++      M+  Y+  G++  A+ +
Sbjct: 252 NNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSV 311

Query: 90  FNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLL 149
           FN+   K+   WS++I GY+      EA  LF +MQ  G +P Q T+ +V+  C+  G L
Sbjct: 312 FNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGAL 371

Query: 150 QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
            + +  H +  K  F     +   L++MYAKC  +  A  +F   P  KN ++WT MI+ 
Sbjct: 372 DQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPR-KNVISWTCMISA 430

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
           ++ +G    A+  F  M  E +E N  TF  +L AC+     + G ++   +++      
Sbjct: 431 FAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITP 490

Query: 270 VYVQ-SALIDMYAKCGDLDSARRLLEYSEI-DNEVSWNSMIVGFARQG 315
            +V    ++D++ +   L  A  L+E   +  N + W S++      G
Sbjct: 491 KHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHG 538


>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
 gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
          Length = 637

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 239/612 (39%), Positives = 359/612 (58%), Gaps = 4/612 (0%)

Query: 201 VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
           V+W  +I  Y  N    +    FR M ++G+   +      L+AC        G  +   
Sbjct: 27  VSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLA 86

Query: 261 ILSSGFEANVYVQSALIDMYAKCGD-LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKE 319
           IL +G E    VQ+AL+ MY K G   D+A   L  S  D  V+W++M+  +AR G  +E
Sbjct: 87  ILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSHRD-VVAWSAMVAAYARNGHPRE 145

Query: 320 ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALID 379
           AL LF++M    +  +  T  S L+  AS  DL +   +H  +   G +    V  AL++
Sbjct: 146 ALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVN 205

Query: 380 MYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVV 439
           +Y K G ++ A   F  + +K+V++W+++    A +    +A++    M + G+ P+   
Sbjct: 206 LYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLVPNSTT 265

Query: 440 VSSILSACAELTVLEFGQQVH--AVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
             S+L ACA +  L+ G+++H     L  G  S + V  +LV +Y+KCG +  A  +FD 
Sbjct: 266 FVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDK 325

Query: 498 MHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENA 557
           +   D++ W +LI   AQ+G+ ++AL+ +++M   G +P  ITF  +LFACSHAG+ +  
Sbjct: 326 IAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQG 385

Query: 558 RWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACR 617
           R +F S    +GI P  +H+ CM+DLLGR+G +++++ LL  M  EP    W A L ACR
Sbjct: 386 RKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACR 445

Query: 618 VHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGC 677
            + +++    AA NLF+L+P    PYV LSNMY+ AG+W D AR+R+ M+     KE G 
Sbjct: 446 TYRNMDRAIWAAENLFQLDPRKRAPYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGR 505

Query: 678 SWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIG 737
           SW+E   +VH FIS D  HP   +I++++  +  L+KEAGYVPD    LH+V++E KEI 
Sbjct: 506 SWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKLMKEAGYVPDTEMVLHDVKQEVKEIM 565

Query: 738 LAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHH 797
           + YHSEKLA+AF LLT P+G+PIR+ KNLRVC DCHTA K+IS +  R I++RD NRFH 
Sbjct: 566 VGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHR 625

Query: 798 FKAGNCSCGDYW 809
           F+ G CSCGDYW
Sbjct: 626 FQNGACSCGDYW 637



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 206/400 (51%), Gaps = 7/400 (1%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY-SNYGLDIEAFELFWQMQLEGYRP 131
           M++AY+  G +   +K F+E P  +  +W++LI  Y  N   D   +  F  M L+G  P
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFD-RCWLFFRGMLLQGINP 59

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC-KCIFEAEYL 190
            +  +   L  C+    +  G       + T  +  + V T LV MY K   C   A   
Sbjct: 60  GEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVF 119

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
            +M    ++ VAW+ M+  Y++NG+  +A+  FR M ++GV  N+ T  S L ACA++  
Sbjct: 120 LRM--SHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGD 177

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              GA +H  + + G ++ V V +AL+++Y KCG +++A          N V+W+++   
Sbjct: 178 LRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAA 237

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH--SLIVKTGFE 368
           +AR   +++A+ +  +M    +  +  T+ SVL+  A+   L   + +H  + ++  G E
Sbjct: 238 YARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLE 297

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
              +V  AL++MY+K GNL  A  +F+ +   D++ W SLI   A HG  E+AL+ F  M
Sbjct: 298 SDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERM 357

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
           R+ G+ P  +  +S+L AC+   +L+ G++    F+   G
Sbjct: 358 RLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHG 397



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 190/414 (45%), Gaps = 41/414 (9%)

Query: 16  RSKIIGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMI 74
           R   IG +     +G  ++  S +  ALV  +   G   +A  +F +MS RD   W+ M+
Sbjct: 75  REITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSHRDVVAWSAMV 134

Query: 75  AAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQY 134
           AAYA +G  REA  LF                                QM L+G  P++ 
Sbjct: 135 AAYARNGHPREALGLFR-------------------------------QMDLDGVAPNKV 163

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
           TL + L  C+  G L+ G   H             V T LV++Y KC  I  A   F   
Sbjct: 164 TLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQI 223

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
            + KN VAW+ +   Y++N     AI     M +EG+  N  TF S+L ACAA++A   G
Sbjct: 224 VE-KNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQG 282

Query: 255 AQVH--GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            ++H    +L  G E++VYV +AL++MY+KCG+L  A  + +     + V WNS+I   A
Sbjct: 283 RRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNA 342

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTGF--EG 369
           + G  ++AL LF++M    ++    T+ SVL  C  + +     K   S I   G   E 
Sbjct: 343 QHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEA 402

Query: 370 YKFVNNALIDMYAKQG-NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
             F    ++D+  + G  +D   ++ ++  +   ++W + +  C  + + + A+
Sbjct: 403 EHF--GCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAI 454



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 168/358 (46%), Gaps = 8/358 (2%)

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           ++  Y++ G++ + R+  +   + + VSWN++I  +            F+ M  + I   
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
           +      L+      ++   +S+   I+ TG E    V  AL+ MY K G+   A  VF 
Sbjct: 61  EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
            M  +DV++W++++   A +G   EAL  F  M + G+ P+ V + S L ACA L  L  
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRS 180

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
           G  +H      G  S + V  +LV +Y KCG I  A   F  +  ++V+ W+A+    A+
Sbjct: 181 GALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYAR 240

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
           N + ++A++   +M   G  P+  TFV +L AC+     +  R   E   +V G     D
Sbjct: 241 NDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERT-QVLGGGLESD 299

Query: 576 HY--ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGD----LELGER 627
            Y    ++++  + G L  A  + D+ +   D  +W +L++    HG     LEL ER
Sbjct: 300 VYVLTALVNMYSKCGNLALAGDMFDK-IAHLDLVLWNSLIATNAQHGQTEKALELFER 356


>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
          Length = 724

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 233/547 (42%), Positives = 343/547 (62%), Gaps = 2/547 (0%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEAN-VYVQSALIDMYAKCGDLDSARRLLEYS 296
           +  +L  C  +   + G  VH  ++ S F  N + +Q+ +++MYAKCG LD ARR+ +  
Sbjct: 90  YSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEM 149

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              + V+W ++I GF++    ++AL LF +M    ++ + FT  S+L    S   L+   
Sbjct: 150 PTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGT 209

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H+  +K G++   +V +AL+DMYA+ G++D A + F+ M  K  +SW +LI+G A  G
Sbjct: 210 QLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKG 269

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
             E AL     M+     P H   SS+ SACA +  LE G+ VHA  +KSG      + N
Sbjct: 270 EGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGN 329

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           +L+ +YAK G I+DA RVFD +   DV++W  ++ GCAQ+G GKE L  ++QML  G +P
Sbjct: 330 TLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEP 389

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           + I+F+ +L ACSH+GL +   +YFE M K Y ++P   HY   +DLLGR G L  A+  
Sbjct: 390 NEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVPHYVTFVDLLGRVGLLDRAERF 448

Query: 597 LDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
           + +M  EP A VW ALL ACR+H ++ELG  AA   FEL+P ++ P + LSN+Y++AG+W
Sbjct: 449 IREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRW 508

Query: 657 EDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA 716
            D A+VRK+MK  G++K+P CSWVE  + VH+F++ D  HP   +I  K +EI   IKE 
Sbjct: 509 RDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHPQIKEIRGKWEEISGKIKEI 568

Query: 717 GYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAM 776
           GYVPD +  L  V+++ +E  L YHSEKLA+AF LL  P G+PIRI KN+RVCGDCH A+
Sbjct: 569 GYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPTGSPIRIKKNIRVCGDCHAAI 628

Query: 777 KYISAVY 783
           K++S +Y
Sbjct: 629 KFVSKIY 635



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 136/407 (33%), Positives = 214/407 (52%), Gaps = 6/407 (1%)

Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA 168
           S+ G  + A +L   +Q     P       +L+ C+  G +++G   H + + + F  N 
Sbjct: 66  SDGGTGLYALDL---IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNH 122

Query: 169 FVVTGL-VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR 227
            V+  + V+MYAKC C+ +A  +F   P  K+ V WT +I G+SQN     A+  F  M 
Sbjct: 123 LVLQNIIVNMYAKCGCLDDARRMFDEMPT-KDMVTWTALIAGFSQNNRPRDALLLFPQML 181

Query: 228 VEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLD 287
             G++ N FT  S+L A  +    D G Q+H   L  G++++VYV SAL+DMYA+CG +D
Sbjct: 182 RLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMD 241

Query: 288 SARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFA 347
           +A+   +     +EVSWN++I G AR+G  + AL L  KM  ++ +   FTY SV +  A
Sbjct: 242 AAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACA 301

Query: 348 SNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTS 407
           S   L   K VH+ ++K+G +   F+ N L+DMYAK G++D A  VF+ +   DV+SW +
Sbjct: 302 SIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNT 361

Query: 408 LITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG 467
           ++TGCA HG  +E L  F  M   GI P+ +    +L+AC+   +L+ G     +  K  
Sbjct: 362 MLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYK 421

Query: 468 GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDV-ITWTALIMGC 513
               +    + V +  + G ++ A R    M        W AL+  C
Sbjct: 422 VEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGAC 468



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 182/350 (52%), Gaps = 2/350 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++  YA  G L +A+++F+E P K+  TW++LI G+S      +A  LF QM   G +
Sbjct: 127 NIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQ 186

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+ +TL ++L+    +  L  G Q H + +K  +  + +V + LVDMYA+C  +  A+  
Sbjct: 187 PNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLA 246

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P  K+ V+W  +I+G+++ G G  A+     M+ +  +   FT+ S+ +ACA++ A
Sbjct: 247 FDGMPT-KSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGA 305

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            + G  VH  ++ SG +   ++ + L+DMYAK G +D A+R+ +     + VSWN+M+ G
Sbjct: 306 LEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTG 365

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
            A+ G  KE L  F++M    I+ ++ ++  VL   + +  L+       L+ K   E  
Sbjct: 366 CAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPD 425

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYE 419
                  +D+  + G LD A      M  +     W +L+  C  H + E
Sbjct: 426 VPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNME 475



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 151/306 (49%), Gaps = 11/306 (3%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           +  + ++  YA  G +  A+  F+  P K+  +W++LI G++  G    A  L W+MQ +
Sbjct: 225 YVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRK 284

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
            ++P+ +T  +V   C+  G L++G+  H + IK+   L AF+   L+DMYAK   I +A
Sbjct: 285 NFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDA 344

Query: 188 EYLFKMF--PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           + +F     PD    V+W TM+TG +Q+G G + ++ F  M   G+E N+ +F  +LTAC
Sbjct: 345 KRVFDRLVKPDV---VSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTAC 401

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           +     D G      +     E +V      +D+  + G LD A R +    I+   +  
Sbjct: 402 SHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVW 461

Query: 306 SMIVGFARQGFHKE-ALSLFKKMHARDIKIDDFTYPSVL--NCFASNIDLNNAKSVHSLI 362
             ++G  R   HK   L ++    A ++   D + P +L  N +AS     +   V  ++
Sbjct: 462 GALLGACR--MHKNMELGVYAAERAFELDPHD-SGPRMLLSNIYASAGRWRDVAKVRKMM 518

Query: 363 VKTGFE 368
            ++G +
Sbjct: 519 KESGVK 524



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 144/286 (50%), Gaps = 27/286 (9%)

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG-ICPDHVVVSSILSACAELTV 452
           F + QDKD++  +    G            Y  D+   G + PD+ + S +L  C  L  
Sbjct: 52  FCVFQDKDLLRKSQSDGGTGL---------YALDLIQRGSLVPDYNLYSKLLKECTRLGK 102

Query: 453 LEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIM 511
           +E G+ VHA  + S    + L + N +V +YAKCGC++DA R+FD M T+D++TWTALI 
Sbjct: 103 VEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIA 162

Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC-SHAGLAENARWYFESMDKVYGI 570
           G +QN + ++AL  + QML  G +P++ T   LL A  S  GL    + +   +   YG 
Sbjct: 163 GFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLK--YGY 220

Query: 571 KPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAAN 630
           +      + ++D+  R G +  A+   D M  + + + W AL+S     G+   GE A +
Sbjct: 221 QSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVS-WNALISGHARKGE---GEHALH 276

Query: 631 NLFELEPMNAMP-YVQLSNMYST--------AGKWEDAARVRKLMK 667
            L++++  N  P +   S+++S          GKW  A  ++  +K
Sbjct: 277 LLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLK 322



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/184 (20%), Positives = 71/184 (38%), Gaps = 32/184 (17%)

Query: 25  YTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRL 83
           + H + + +K  + +   L+D ++ +G ID+A ++F+++   D  +WNTM+         
Sbjct: 313 HAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLT-------- 364

Query: 84  REAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLC 143
                                  G + +GL  E  + F QM   G  P++ +   VL  C
Sbjct: 365 -----------------------GCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTAC 401

Query: 144 SLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAW 203
           S  GLL  G  +     K   + +       VD+  +   +  AE   +  P       W
Sbjct: 402 SHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVW 461

Query: 204 TTMI 207
             ++
Sbjct: 462 GALL 465


>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 769

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 233/646 (36%), Positives = 374/646 (57%), Gaps = 3/646 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D    N +++ Y   G LR+A+++F+  P +N  +++S+I GYS  G + EA  L+ +M 
Sbjct: 98  DTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYLKML 157

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
                P Q+   ++++ C+  G +  G+Q H   IK     +      L+ MY +   + 
Sbjct: 158 QADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMS 217

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV-ESNQFTFPSILTA 244
           +A  +F   P  K+ ++W+++I G+SQ G+ F+A+   ++M   GV   N++ F S L A
Sbjct: 218 DASKVFYGIP-AKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKA 276

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C+++   D+G+Q+HG  +      N     +L DMYA+CG LDSARR+    E  +  SW
Sbjct: 277 CSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIERPDTASW 336

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N +I G A  G+  EA+S+F +M       D  +  S+L      + L     +HS I+K
Sbjct: 337 NVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQGMQIHSFIIK 396

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGSYEEALK 423
            GF     V N+L+ MY    +L C F +F   ++K D +SW +++T C  H    E L+
Sbjct: 397 CGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPVEMLR 456

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            F  M +S   PDH+ + ++L  C E++ L+ G QVH    K+G      + N L+ +YA
Sbjct: 457 LFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFIKNGLIDMYA 516

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG +  A R+FDSM   DV++W+ LI+G AQ+G G+EAL  + +M + G +P+++TFVG
Sbjct: 517 KCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQSGFGEEALILFREMKSSGIEPNHVTFVG 576

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           +L ACSH GL E     +  M   +GI P  +H +C++DLL R+G L EA+  +D+M  E
Sbjct: 577 VLTACSHVGLVEEGLKLYAIMQTEHGISPTKEHCSCVVDLLARAGHLNEAERFIDEMKLE 636

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
           PD  VWK LLSAC+  G+++L ++AA N+ +++P N+  +V L +M++++G WEDAA +R
Sbjct: 637 PDVVVWKTLLSACKTQGNVDLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWEDAALLR 696

Query: 664 KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEI 709
             MK   ++K PG SW++   ++HIF +ED  HP R DIY+ +  I
Sbjct: 697 SSMKKHDVKKIPGQSWIDVEDKIHIFFAEDVLHPERDDIYTVLHNI 742



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 163/567 (28%), Positives = 272/567 (47%), Gaps = 25/567 (4%)

Query: 116 EAFELF-WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
           EA E F +  +   ++    T  +++  CS    L +G + H + + +    +  +   +
Sbjct: 46  EALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHI 105

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           + MY KC  + +A  +F   P+ +N V++T++ITGYSQNG   +AI  +  M    +  +
Sbjct: 106 LSMYGKCGSLRDAREVFDFMPE-RNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPD 164

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
           QF F SI+ ACA       G Q+H  ++     +++  Q+ALI MY +   +  A ++  
Sbjct: 165 QFAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFY 224

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI-KIDDFTYPSVLNCFASNIDLN 353
                + +SW+S+I GF++ GF  EALS  K+M +  +   +++ + S L   +S +  +
Sbjct: 225 GIPAKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPD 284

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
               +H L +K    G      +L DMYA+ G LD A  VFN ++  D  SW  +I G A
Sbjct: 285 YGSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLA 344

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
            +G  +EA+  FS+MR SG  PD + + S+L A  +   L  G Q+H+  +K G  + LS
Sbjct: 345 NNGYADEAVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLS 404

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
           V NSL+ +Y  C  +     +F+    + D ++W A++  C Q+ +  E L+ +  ML  
Sbjct: 405 VCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVS 464

Query: 533 GTKPDYITFVGLLFAC---SHAGLAENARWYFESMDKVYG--IKPGPDHYACMIDLLGRS 587
             +PD+IT   LL  C   S   L      Y      V    IK G      +ID+  + 
Sbjct: 465 ECEPDHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFIKNG------LIDMYAKC 518

Query: 588 GKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL-----EPMNAMP 642
           G L +A+ + D M    D   W  L+      G    GE A     E+     EP N + 
Sbjct: 519 GSLRQARRIFDSM-DNGDVVSWSTLIVGYAQSG---FGEEALILFREMKSSGIEP-NHVT 573

Query: 643 YVQLSNMYSTAGKWEDAARVRKLMKSR 669
           +V +    S  G  E+  ++  +M++ 
Sbjct: 574 FVGVLTACSHVGLVEEGLKLYAIMQTE 600



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 161/331 (48%), Gaps = 12/331 (3%)

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFK-KMHARDIKIDDFTYPSVLNCFASNIDLNN 354
           S I  E   N  I    R  F++EAL  F         KI   TY S++   +S+  L  
Sbjct: 23  STIKTEELMNDHINSLCRNSFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQ 82

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
            + +H  I+ +  +    +NN ++ MY K G+L  A  VF+ M +++++S+TS+ITG + 
Sbjct: 83  GRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQ 142

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
           +G   EA+  +  M  + + PD     SI+ ACA    +  G+Q+HA  +K    S L  
Sbjct: 143 NGQEAEAITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIA 202

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
            N+L+ +Y +   ++DA++VF  +  +D+I+W+++I G +Q G   EAL    +ML+ G 
Sbjct: 203 QNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGV 262

Query: 535 -KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIK---PGPDHYAC-MIDLLGRSGK 589
             P+   F   L ACS        R  + S      IK    G     C + D+  R G 
Sbjct: 263 FHPNEYIFGSSLKACSSL-----LRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYARCGF 317

Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHG 620
           L  A+ + +Q +  PD   W  +++    +G
Sbjct: 318 LDSARRVFNQ-IERPDTASWNVIIAGLANNG 347



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 6/123 (4%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK- 96
           +   L+D ++  G + +A ++F+ M + D  +W+T+I  YA SG   EA  LF E     
Sbjct: 507 IKNGLIDMYAKCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQSGFGEEALILFREMKSSG 566

Query: 97  ---NFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRG 152
              N  T+  ++   S+ GL  E  +L+  MQ E G  P++     V+ L +  G L   
Sbjct: 567 IEPNHVTFVGVLTACSHVGLVEEGLKLYAIMQTEHGISPTKEHCSCVVDLLARAGHLNEA 626

Query: 153 EQF 155
           E+F
Sbjct: 627 ERF 629


>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 783

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 238/616 (38%), Positives = 371/616 (60%), Gaps = 1/616 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D + F    ++  YA +GR+  A  +F+  P +N  TW+++I GYS  G    A ELF +
Sbjct: 169 DANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGR 228

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M L+G RP ++ L +    CS  G ++ G Q HGYA +T  + +A VV  L+D+Y KC  
Sbjct: 229 MGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSR 288

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +  A  LF    + +N V+WTTMI GY QN    +A+  F  +   G + + F   SIL 
Sbjct: 289 LLLARRLFDSM-ENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILN 347

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           +C +++A   G QVH  ++ +  E++ YV++ALIDMYAKC  L  AR + E    D+ +S
Sbjct: 348 SCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAIS 407

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           +N+MI G+AR G    A+ +F KM    +K    T+ S+L   +S  DL  +K +H LIV
Sbjct: 408 YNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIV 467

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K+G     +  +ALID+Y+K   +D A +VF+LMQ++D++ W ++I G A +   EEA+K
Sbjct: 468 KSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVK 527

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            F+ +R+SG+ P+     ++++  + L  +  GQQ HA  +K+G  S   + N+L+ +YA
Sbjct: 528 LFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSDPHISNALIDMYA 587

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG I +   +F+S   +DVI W ++I   AQ+G  +EAL  +  M   G +P+Y+TFV 
Sbjct: 588 KCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNYVTFVS 647

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           +L AC+HAGL +    +F SM   Y ++PG +HYA +++L GRSGKL  AK  +++M  E
Sbjct: 648 VLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIE 707

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
           P AT+W++LLSAC + G++E+G  A       +P ++ P V +SN+Y++ G W DA ++R
Sbjct: 708 PVATIWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASKGLWADAQKLR 767

Query: 664 KLMKSRGIRKEPGCSW 679
           + M   G+ KEPG SW
Sbjct: 768 QGMDCAGVVKEPGYSW 783



 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 187/564 (33%), Positives = 294/564 (52%), Gaps = 9/564 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM- 124
           D F  N ++  Y+  GRL +A++LF+  P +N  +W S I  Y+ +G + +A  LF    
Sbjct: 64  DLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGREDDALLLFAAFP 123

Query: 125 -----QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYA 179
                  +G  P+++ L + LR C+     + GEQ HG A K   D N FV T LV++YA
Sbjct: 124 SAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYA 183

Query: 180 KCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFP 239
           K   I  A  +F   P  +N V WT +ITGYSQ G    A+E F  M ++GV  ++F   
Sbjct: 184 KAGRIDAAMSVFDALP-ARNPVTWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLA 242

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
           S  +AC+ +   + G Q+HG    +  E++  V +ALID+Y KC  L  ARRL +  E  
Sbjct: 243 SAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENR 302

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           N VSW +MI G+ +     EA+S+F ++     + D F   S+LN   S   +   + VH
Sbjct: 303 NLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVH 362

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
           + ++K   E  ++V NALIDMYAK  +L  A  VF  + + D IS+ ++I G A  G   
Sbjct: 363 AHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLT 422

Query: 420 EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
            A++ F  MR   + P  +   S+L   +  + LE  +Q+H + +KSG    L   ++L+
Sbjct: 423 GAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALI 482

Query: 480 LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
            VY+K   ++DA  VF  M  RD++ W A+I G AQN +G+EA++ + ++   G  P+  
Sbjct: 483 DVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEF 542

Query: 540 TFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ 599
           TFV L+   S      + + +   + K  G    P     +ID+  + G + E + L + 
Sbjct: 543 TFVALVTVASTLASIFHGQQFHAQIIKA-GADSDPHISNALIDMYAKCGFIEEGRLLFES 601

Query: 600 MVGEPDATVWKALLSACRVHGDLE 623
            +G+ D   W +++S    HG  E
Sbjct: 602 TLGK-DVICWNSMISTYAQHGHAE 624



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 139/461 (30%), Positives = 245/461 (53%), Gaps = 5/461 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G  +   ++ D    N +I  Y    RL  A++LF+    +N  +W+++I GY    LD 
Sbjct: 262 GYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDT 321

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  +FWQ+   G++P  +   ++L  C     + +G Q H + IK   + + +V   L+
Sbjct: 322 EAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALI 381

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMYAKC+ + EA  +F+   +  + +++  MI GY++ G    A+E F  MR   ++ + 
Sbjct: 382 DMYAKCEHLTEARAVFEALAE-DDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSL 440

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            TF S+L   ++ S  +   Q+HG I+ SG   ++Y  SALID+Y+K   +D A+ +   
Sbjct: 441 LTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSL 500

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
            +  + V WN+MI G A+    +EA+ LF ++    +  ++FT+ +++   ++   + + 
Sbjct: 501 MQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHG 560

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           +  H+ I+K G +    ++NALIDMYAK G ++   ++F     KDVI W S+I+  A H
Sbjct: 561 QQFHAQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQH 620

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G  EEAL  F  M  +G+ P++V   S+LSACA   +++ G   H   +K+        +
Sbjct: 621 GHAEEALHVFGMMEGAGVEPNYVTFVSVLSACAHAGLVDEGLH-HFNSMKTKYAVEPGTE 679

Query: 476 N--SLVLVYAKCGCINDANRVFDSMHTRDVIT-WTALIMGC 513
           +  S+V ++ + G ++ A    + M    V T W +L+  C
Sbjct: 680 HYASVVNLFGRSGKLHAAKEFIERMPIEPVATIWRSLLSAC 720



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 143/470 (30%), Positives = 239/470 (50%), Gaps = 21/470 (4%)

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGY 215
           H  A+ +    + F+   L+  Y+K   + +A  LF   P  +N V+W + I+ Y+Q+G 
Sbjct: 53  HARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPS-RNLVSWGSAISMYAQHGR 111

Query: 216 GFKAIECFRDMRVEGVES------NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
              A+  F      G  S      N+F   S L ACA   A  FG QVHG     G +AN
Sbjct: 112 EDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDAN 171

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA 329
           V+V +AL+++YAK G +D+A  + +     N V+W ++I G+++ G    AL LF +M  
Sbjct: 172 VFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGL 231

Query: 330 RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDC 389
             ++ D F   S  +  +    +   + +H    +T  E    V NALID+Y K   L  
Sbjct: 232 DGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLL 291

Query: 390 AFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE 449
           A  +F+ M++++++SWT++I G   +    EA+  F  +  +G  PD    +SIL++C  
Sbjct: 292 ARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGS 351

Query: 450 LTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTAL 509
           L  +  G+QVHA  +K+   S   V N+L+ +YAKC  + +A  VF+++   D I++ A+
Sbjct: 352 LAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAM 411

Query: 510 IMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG 569
           I G A+ G    A++ + +M     KP  +TFV LL   S       +R   E   +++G
Sbjct: 412 IEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSS-------SRSDLELSKQIHG 464

Query: 570 --IKPGP--DHYA--CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
             +K G   D YA   +ID+  +   + +AK L+  ++   D  +W A++
Sbjct: 465 LIVKSGTSLDLYAGSALIDVYSKFSLVDDAK-LVFSLMQNRDMVIWNAMI 513



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 187/390 (47%), Gaps = 12/390 (3%)

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           +L+  A    R      H   + SG   ++++ + L+  Y+K G L  ARRL +     N
Sbjct: 36  LLSCLAGDRLRRVLPPAHARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRN 95

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD------FTYPSVLNCFASNIDLNN 354
            VSW S I  +A+ G   +AL LF    +      D      F   S L   A +     
Sbjct: 96  LVSWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARF 155

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
            + VH +  K G +   FV  AL+++YAK G +D A  VF+ +  ++ ++WT++ITG + 
Sbjct: 156 GEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQ 215

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
            G    AL+ F  M + G+ PD  V++S  SAC+ L  +E G+Q+H    ++   S  SV
Sbjct: 216 AGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASV 275

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
            N+L+ +Y KC  +  A R+FDSM  R++++WT +I G  QN    EA+  + Q+   G 
Sbjct: 276 VNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGW 335

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA--CMIDLLGRSGKLIE 592
           +PD      +L +C         R     + K        D Y    +ID+  +   L E
Sbjct: 336 QPDVFACTSILNSCGSLAAIWQGRQVHAHVIKA---DLESDEYVKNALIDMYAKCEHLTE 392

Query: 593 AKALLDQMVGEPDATVWKALLSACRVHGDL 622
           A+A+ + +  E DA  + A++      GDL
Sbjct: 393 ARAVFEAL-AEDDAISYNAMIEGYARLGDL 421



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 126/270 (46%), Gaps = 35/270 (12%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           AL+D +S    +D+A  +F  M +RD   WN MI   A + R  EA KLF          
Sbjct: 480 ALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFA--------- 530

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
                                 ++++ G  P+++T   ++ + S    +  G+QFH   I
Sbjct: 531 ----------------------RLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQII 568

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAI 220
           K   D +  +   L+DMYAKC  I E   LF+    GK+ + W +MI+ Y+Q+G+  +A+
Sbjct: 569 KAGADSDPHISNALIDMYAKCGFIEEGRLLFES-TLGKDVICWNSMISTYAQHGHAEEAL 627

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDM 279
             F  M   GVE N  TF S+L+ACA     D G      + +    E      ++++++
Sbjct: 628 HVFGMMEGAGVEPNYVTFVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNL 687

Query: 280 YAKCGDLDSARRLLEYSEIDNEVS-WNSMI 308
           + + G L +A+  +E   I+   + W S++
Sbjct: 688 FGRSGKLHAAKEFIERMPIEPVATIWRSLL 717



 Score = 45.1 bits (105), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 6/123 (4%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF-- 95
           ++ AL+D ++  G I+E   LFE    +D   WN+MI+ YA  G   EA  +F       
Sbjct: 578 ISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAG 637

Query: 96  --KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRG 152
              N+ T+ S++   ++ GL  E    F  M+ +    P      +V+ L    G L   
Sbjct: 638 VEPNYVTFVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNLFGRSGKLHAA 697

Query: 153 EQF 155
           ++F
Sbjct: 698 KEF 700


>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1161

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 248/651 (38%), Positives = 381/651 (58%), Gaps = 9/651 (1%)

Query: 166  LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            LN      L+DMY KC+    A  +F   P+ +N V+W+ +++G+  NG    ++  F +
Sbjct: 410  LNLITSNYLIDMYCKCREPLMAYKVFDSMPE-RNVVSWSALMSGHVLNGDLKGSLSLFSE 468

Query: 226  MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
            M  +G+  N+FTF + L AC  ++A + G Q+HG  L  GFE  V V ++L+DMY+KCG 
Sbjct: 469  MGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGR 528

Query: 286  LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK--IDDFTYPSVL 343
            ++ A ++       + +SWN+MI GF   G+  +AL  F  M   +IK   D+FT  S+L
Sbjct: 529  INEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLL 588

Query: 344  NCFASNIDLNNAKSVHSLIVKTGFE--GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
               +S   +   K +H  +V++GF       +  +L+D+Y K G L  A   F+ +++K 
Sbjct: 589  KACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKT 648

Query: 402  VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
            +ISW+SLI G A  G + EA+  F  ++      D   +SSI+   A+  +L  G+Q+ A
Sbjct: 649  MISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQA 708

Query: 462  VFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKE 521
            + +K       SV NS+V +Y KCG +++A + F  M  +DVI+WT +I G  ++G GK+
Sbjct: 709  LAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKK 768

Query: 522  ALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMI 581
            +++ + +ML    +PD + ++ +L ACSH+G+ +     F  + + +GIKP  +HYAC++
Sbjct: 769  SVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVV 828

Query: 582  DLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAM 641
            DLLGR+G+L EAK L+D M  +P+  +W+ LLS CRVHGD+ELG+     L  ++  N  
Sbjct: 829  DLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPA 888

Query: 642  PYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTD 701
             YV +SN+Y  AG W +    R+L   +G++KE G SWVE   +VH F S +  HPL   
Sbjct: 889  NYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPV 948

Query: 702  IYSKIDEI-MLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLT--LPQ-G 757
            I   + E    L +E GYV  +   LH++++E KE  L  HSEKLA+   L T  L Q G
Sbjct: 949  IQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKG 1008

Query: 758  APIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDY 808
              IR+FKNLRVC DCH  +K +S +     ++RD+ RFH F+ G CSCGDY
Sbjct: 1009 KTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1059



 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 153/466 (32%), Positives = 256/466 (54%), Gaps = 14/466 (3%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
            T N +I  Y        A K+F+  P +N  +WS+L+ G+   G    +  LF +M  +
Sbjct: 413 ITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQ 472

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G  P+++T    L+ C L   L++G Q HG+ +K  F++   V   LVDMY+KC  I EA
Sbjct: 473 GIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEA 532

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES--NQFTFPSILTAC 245
           E +F+   D ++ ++W  MI G+   GYG KA++ F  M+   ++   ++FT  S+L AC
Sbjct: 533 EKVFRRIVD-RSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKAC 591

Query: 246 AAVSARDFGAQVHGCILSSGFE--ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           ++      G Q+HG ++ SGF   ++  +  +L+D+Y KCG L SAR+  +  +    +S
Sbjct: 592 SSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMIS 651

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           W+S+I+G+A++G   EA+ LFK++   + +ID F   S++  FA    L   K + +L V
Sbjct: 652 WSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAV 711

Query: 364 K--TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           K  +G E    V N+++DMY K G +D A   F  MQ KDVISWT +ITG   HG  +++
Sbjct: 712 KLPSGLETS--VLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKS 769

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL- 480
           ++ F +M    I PD V   ++LSAC+   +++ G+++ +  L++ G        + V+ 
Sbjct: 770 VRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVD 829

Query: 481 VYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGK---GKEA 522
           +  + G + +A  + D+M  + +V  W  L+  C  +G    GKE 
Sbjct: 830 LLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEV 875



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 194/391 (49%), Gaps = 43/391 (10%)

Query: 38  DLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK 96
           ++  +LVD +S  G I+EA ++F ++ DR   +WN MIA + ++G               
Sbjct: 514 EVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG--------------- 558

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGY--RPSQYTLDNVLRLCSLKGLLQRGEQ 154
                    YG        +A + F  MQ      RP ++TL ++L+ CS  G++  G+Q
Sbjct: 559 ---------YGS-------KALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQ 602

Query: 155 FHGYAIKTCFDL--NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
            HG+ +++ F    +A +   LVD+Y KC  +F A   F    + K  ++W+++I GY+Q
Sbjct: 603 IHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKE-KTMISWSSLILGYAQ 661

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI--LSSGFEANV 270
            G   +A+  F+ ++    + + F   SI+   A  +    G Q+      L SG E +V
Sbjct: 662 EGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSV 721

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
              ++++DMY KCG +D A +     ++ + +SW  +I G+ + G  K+++ +F +M   
Sbjct: 722 L--NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRH 779

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT-GFEGYKFVNNALIDMYAKQGNLDC 389
           +I+ D+  Y +VL+  + +  +   + + S +++T G +        ++D+  + G L  
Sbjct: 780 NIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKE 839

Query: 390 AFMVFNLMQDK-DVISWTSLITGCAYHGSYE 419
           A  + + M  K +V  W +L++ C  HG  E
Sbjct: 840 AKHLIDTMPIKPNVGIWQTLLSLCRVHGDIE 870


>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
          Length = 1073

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 259/741 (34%), Positives = 418/741 (56%), Gaps = 10/741 (1%)

Query: 71   NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
            N +I+ Y+  G L  A+++F+     N  TW+++I GY   GL  EAF LF  M+ +G++
Sbjct: 341  NALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGE-GLMEEAFRLFRAMEQKGFQ 399

Query: 131  PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            P ++T  ++L +C+ +  L RG++ H     T +  +  V T L+ MYAKC    EA  +
Sbjct: 400  PDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKV 459

Query: 191  FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
            F   P+ +N ++W   I+   ++  G +A + F+ MR + V  +  TF ++L +C +   
Sbjct: 460  FNQMPE-RNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPED 518

Query: 251  RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
             + G  +HG I   G  +N +V +ALI MY +CG+L  AR +       +  SWN+MI  
Sbjct: 519  LERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAA 578

Query: 311  FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
              + G +  A  LF+K  +   K D +T+ +VL   A+  DL+  + +H L+ K GF   
Sbjct: 579  NVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEKGGFGKD 638

Query: 371  KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
              V   LI MY+K G+L  A  VF+ +Q+KDV+ W +++   A+    ++ALK F  M++
Sbjct: 639  IRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQL 698

Query: 431  SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
             G+ PD    S+ L+ACA LT +E G+++HA   ++G  +   V NSL+ +Y++CGC+  
Sbjct: 699  EGVNPDSSTYSTALNACARLTAVEHGKKIHAQLKEAGMETDTRVSNSLIEMYSRCGCLCS 758

Query: 491  ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
            A +VF+ M +RD+ +W ALI G  QNG+G  AL++Y+ ML     P+  TF  +L + + 
Sbjct: 759  AKQVFEKMLSRDINSWNALIAGYCQNGQGNIALEYYELMLRASIVPNKATFTSILSSYAQ 818

Query: 551  AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
             G  E A  + ES+ K + ++P   HYA M+  LGR+G L EA+  ++++  E  A +W+
Sbjct: 819  LGEEEQAFDFLESIKKEWNMEPSEQHYAYMVAALGRAGLLKEAEEFIEEISAESAALMWE 878

Query: 611  ALLSACRVHGDLELGERAANNLFELEPMNAMPYV--QLSNMYSTAGKWEDAARVRKLMKS 668
            +LL ACR+H ++EL E A  +L + +   A P V  QL ++Y+ AG+WED + ++  M+ 
Sbjct: 879  SLLVACRIHLNVELAETAVEHLLDAKA-QASPAVCEQLMSIYAAAGRWEDVSVLKTTMQE 937

Query: 669  RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHN 728
             G+     C+ +E NS+ H FI+      +   +  KI+E++  + + G+  D  +A ++
Sbjct: 938  AGLVALKSCT-IEVNSEFHNFIANHLSPQI--GVQCKIEELVRKMTDRGFSLDPQYASND 994

Query: 729  VEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHII 788
              E  KE       E LAVA+GL     G  IR   + RV    H  +K+IS  Y R I+
Sbjct: 995  SRE--KECLFFQCPELLAVAYGLEHTASGVSIRCVTDSRVTDPSHEMLKFISRAYDRGIL 1052

Query: 789  LRDSNRFHHFKAGNCSCGDYW 809
            +RD N FH F+ G CSCGDYW
Sbjct: 1053 VRDPNCFHIFEDGICSCGDYW 1073



 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 200/621 (32%), Positives = 323/621 (52%), Gaps = 12/621 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +  N +I+ Y+  G + +A  +F     K+  +W+++I GY+ +G D EA +LF+QMQ
Sbjct: 134 DIYLNNMLISMYSKCGSIEDANNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQ 193

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            EG +P+Q T  ++L  C     L+ GEQ H    K  ++ +  V T L++MY KC  + 
Sbjct: 194 REGLKPNQNTFISILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLE 253

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A  +F    + +N V+WT MI+GY Q+G   +A+  FR +   G++ N+ +F SIL AC
Sbjct: 254 LARKVFNEMRE-RNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGAC 312

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
              +    G ++H  I  +G E  V V +ALI MY++CG L +AR++ +     N  +WN
Sbjct: 313 TNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWN 372

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +MI G+  +G  +EA  LF+ M  +  + D FTY S+L   A   DL+  K +HS I  T
Sbjct: 373 AMIAGYG-EGLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIAST 431

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G++    V  ALI MYAK G+ + A  VFN M +++VISW + I+ C  H   +EA + F
Sbjct: 432 GWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAF 491

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             MR   + PDH+   ++L++C     LE G+ +H    + G  S+  V N+L+ +Y +C
Sbjct: 492 KQMRRDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRC 551

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G + DA  VF  +  RD+ +W A+I    Q+G    A   + +  + G K D  TF+ +L
Sbjct: 552 GNLADAREVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVL 611

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
            A ++    +  R     ++K  G          +I +  + G L +A+ +    V E D
Sbjct: 612 RAVANLEDLDAGRMIHGLVEK-GGFGKDIRVLTTLIKMYSKCGSLRDAENVFS-TVQEKD 669

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
              W A+L+A   H D     R  + L   + M        S+ YSTA      AR+  +
Sbjct: 670 VVCWNAMLAA-YAHSD-----RGQDALKLFQQMQLEGVNPDSSTYSTA--LNACARLTAV 721

Query: 666 MKSRGIRKEPGCSWVETNSQV 686
              + I  +   + +ET+++V
Sbjct: 722 EHGKKIHAQLKEAGMETDTRV 742



 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 169/500 (33%), Positives = 276/500 (55%), Gaps = 7/500 (1%)

Query: 124 MQLEGYRPSQYTLD---NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK 180
           +QL G R  Q  L+     L+ C L   L  G++ H +     F  + ++   L+ MY+K
Sbjct: 88  VQLLGKRGVQANLNFYARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSK 147

Query: 181 CKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
           C  I +A  +F+   D K+ V+W  MI+GY+ +G   +A + F  M+ EG++ NQ TF S
Sbjct: 148 CGSIEDANNVFQAMED-KDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFIS 206

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           IL+AC +  A +FG Q+H  I  +G+E++V V +ALI+MY KCG L+ AR++       N
Sbjct: 207 ILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERN 266

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
            VSW +MI G+ + G  +EAL+LF+K+    I+ +  ++ S+L    +  DL     +H+
Sbjct: 267 VVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHA 326

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
            I + G E    V NALI MY++ G+L  A  VF+ ++  +  +W ++I G    G  EE
Sbjct: 327 YIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYG-EGLMEE 385

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
           A + F  M   G  PD    +S+L+ CA+   L+ G+++H+    +G  + L+V  +L+ 
Sbjct: 386 AFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALIS 445

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           +YAKCG   +A +VF+ M  R+VI+W A I  C ++  GKEA Q + QM      PD+IT
Sbjct: 446 MYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHIT 505

Query: 541 FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
           F+ LL +C+     E  R+    +++ +G+         +I + GR G L +A+ +  + 
Sbjct: 506 FITLLNSCTSPEDLERGRYIHGKINQ-WGMLSNNHVANALISMYGRCGNLADAREVFYR- 563

Query: 601 VGEPDATVWKALLSACRVHG 620
           +   D   W A+++A   HG
Sbjct: 564 IRRRDLGSWNAMIAANVQHG 583



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 136/435 (31%), Positives = 228/435 (52%), Gaps = 7/435 (1%)

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
           GV++N   +   L  C    +   G +VH  + S+ F+ ++Y+ + LI MY+KCG ++ A
Sbjct: 95  GVQANLNFYARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDA 154

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
             + +  E  + VSWN+MI G+A  G  +EA  LF +M    +K +  T+ S+L+   S 
Sbjct: 155 NNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSP 214

Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
           I L   + +HS I K G+E    V+ ALI+MY K G+L+ A  VFN M++++V+SWT++I
Sbjct: 215 IALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMI 274

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
           +G   HG   EAL  F  +  SGI P+ V  +SIL AC     L  G ++HA   ++G  
Sbjct: 275 SGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLE 334

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
             + V N+L+ +Y++CG + +A +VFD++ + +  TW A+I G  + G  +EA + +  M
Sbjct: 335 QEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGE-GLMEEAFRLFRAM 393

Query: 530 LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGK 589
             +G +PD  T+  LL  C+     +  +    S     G +        +I +  + G 
Sbjct: 394 EQKGFQPDKFTYASLLAICADRADLDRGK-ELHSQIASTGWQTDLTVATALISMYAKCGS 452

Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP-YVQLSN 648
             EA+ + +QM  E +   W A +S C  H   +LG+ A     ++   +  P ++    
Sbjct: 453 PEEARKVFNQM-PERNVISWNAFISCCCRH---DLGKEAFQAFKQMRRDDVNPDHITFIT 508

Query: 649 MYSTAGKWEDAARVR 663
           + ++    ED  R R
Sbjct: 509 LLNSCTSPEDLERGR 523



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 83/368 (22%), Positives = 149/368 (40%), Gaps = 77/368 (20%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +S  G + +A  +F  + ++D   WN M+AAYA+S R ++A KLF               
Sbjct: 649 YSKCGSLRDAENVFSTVQEKDVVCWNAMLAAYAHSDRGQDALKLFQ-------------- 694

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                            QMQLEG  P   T    L  C+    ++ G++ H    +   +
Sbjct: 695 -----------------QMQLEGVNPDSSTYSTALNACARLTAVEHGKKIHAQLKEAGME 737

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLF-KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
            +  V   L++MY++C C+  A+ +F KM     N  +W  +I GY QNG G  A+E + 
Sbjct: 738 TDTRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDIN--SWNALIAGYCQNGQGNIALEYYE 795

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
            M    +  N+ TF SIL++                                   YA+ G
Sbjct: 796 LMLRASIVPNKATFTSILSS-----------------------------------YAQLG 820

Query: 285 DLDSARRLL-----EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           + + A   L     E++   +E  +  M+    R G  KEA    +++ A    +    +
Sbjct: 821 EEEQAFDFLESIKKEWNMEPSEQHYAYMVAALGRAGLLKEAEEFIEEISAESAAL---MW 877

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
            S+L     ++++  A++    ++    +    V   L+ +YA  G  +   ++   MQ+
Sbjct: 878 ESLLVACRIHLNVELAETAVEHLLDAKAQASPAVCEQLMSIYAAAGRWEDVSVLKTTMQE 937

Query: 400 KDVISWTS 407
             +++  S
Sbjct: 938 AGLVALKS 945


>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 679

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 252/663 (38%), Positives = 383/663 (57%), Gaps = 13/663 (1%)

Query: 150 QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP--DGKNHVAWTTMI 207
           Q  EQ H +++KT    + FV + L+ +Y+  K I +  Y   +F     ++ + W T+I
Sbjct: 27  QEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPK-INDLGYARSIFDRIQRRSLIHWNTII 85

Query: 208 TGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFE 267
             Y +N +    I  F ++  E +  N FT P ++  CA +     G Q+HG  L  GF 
Sbjct: 86  KCYVENQFSHDGIVLFHELVHEYLPDN-FTLPCVIKGCARLGVVQEGKQIHGLALKIGFG 144

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM 327
           ++V+VQ +L++MY+KCG++D AR++ +     + V WNS+I G+AR G    AL LF++M
Sbjct: 145 SDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEM 204

Query: 328 HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL 387
             RD     F++  +++  +    + +A+ +   +       +    NA+I+ Y K G+ 
Sbjct: 205 PERDA----FSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSW----NAMINGYMKSGDF 256

Query: 388 DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSAC 447
           D A  +F  M   D+++W  +I G   +G + +A+K F  M   G  P H  + S+LSA 
Sbjct: 257 DSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAV 316

Query: 448 AELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWT 507
           + L VL  G+ +H+   K+G      +  SL+ +YAKCGCI  A  VF ++  + V  WT
Sbjct: 317 SGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWT 376

Query: 508 ALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKV 567
           A+I+G   +G    AL  + +M   G KP+ I F+G+L AC+HAGL ++ R YF+ M   
Sbjct: 377 AIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNE 436

Query: 568 YGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGER 627
           Y I+P  +HY C++D+L R+G L EAK  ++ M   P+  +W +LL   R HG +++GE 
Sbjct: 437 YKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEY 496

Query: 628 AANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVH 687
           AA  + E+ P     Y+ LSNMY+ +G WE  + VR++M  RG RK+PGCS VE    +H
Sbjct: 497 AAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLH 556

Query: 688 IFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVE-EEGKEIGLAYHSEKLA 746
            FI  D  HP   +IY+K+ E+   +K  G+VPD    L  +E E+ KE  L  HSE+LA
Sbjct: 557 EFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKEKEAELENHSERLA 616

Query: 747 VAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCG 806
           +AFGL+ +  G PIRI KNLRVC DCH+  K +S +Y R II+RD+ RFHHFK G+CSC 
Sbjct: 617 IAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCSCM 676

Query: 807 DYW 809
           DYW
Sbjct: 677 DYW 679



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 133/459 (28%), Positives = 226/459 (49%), Gaps = 22/459 (4%)

Query: 68  FTWNTMIAAYANS--GRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           F  + ++A Y++     L  A+ +F+    ++   W+++I  Y       +   LF ++ 
Sbjct: 46  FVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELV 105

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            E Y P  +TL  V++ C+  G++Q G+Q HG A+K  F  + FV   LV+MY+KC  I 
Sbjct: 106 HE-YLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEID 164

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI---L 242
            A  +F    D K+ V W ++I GY++ G    A++ F +M     E + F++  +   L
Sbjct: 165 CARKVFDGMID-KDVVLWNSLIDGYARCGEIDIALQLFEEMP----ERDAFSWTVLVDGL 219

Query: 243 TACAAV-SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           + C  V SAR    Q+  C        N+   +A+I+ Y K GD DSA  L     I + 
Sbjct: 220 SKCGKVESARKLFDQM-PC-------RNLVSWNAMINGYMKSGDFDSALELFYQMPIWDL 271

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           V+WN MI G+   G   +A+ +F  M     +    T  SVL+  +    L   + +HS 
Sbjct: 272 VTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSY 331

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           + K GFE    +  +LI+MYAK G ++ A  VF  +Q K V  WT++I G   HG    A
Sbjct: 332 MEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHA 391

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVL 480
           L  F +M  +G+ P+ ++   +L+AC    +++ G+Q   + +       +L     LV 
Sbjct: 392 LALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVD 451

Query: 481 VYAKCGCINDANRVFDSMH-TRDVITWTALIMGCAQNGK 518
           +  + G + +A    ++M  + + + W +L+ G   +GK
Sbjct: 452 ILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGK 490



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 167/364 (45%), Gaps = 44/364 (12%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           +L+D ++  GEID A QLFE+M +RD F+W  ++   +  G++  A+KLF++ P +N  +
Sbjct: 183 SLIDGYARCGEIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVS 242

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQL-------------------------------EGY 129
           W+++I GY   G    A ELF+QM +                                G 
Sbjct: 243 WNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGS 302

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           RPS  TL +VL   S   +L +G   H Y  K  F+L+  + T L++MYAKC CI  A  
Sbjct: 303 RPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALT 362

Query: 190 LFKMFPDGK-NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
           +F+     K  H  WT +I G   +G    A+  F +M   G++ N   F  +L AC   
Sbjct: 363 VFRAIQKKKVGH--WTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHA 420

Query: 249 SARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNS 306
              D G Q    +++    E  +     L+D+  + G L+ A+  +E   I  N+V W S
Sbjct: 421 GLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMS 480

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFT---YPSVLNCFASNIDLNNAKSVHSLIV 363
           ++ G    G     + + +    R I++   T   Y  + N +A++        V  ++ 
Sbjct: 481 LLGGSRNHG----KIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMY 536

Query: 364 KTGF 367
           K GF
Sbjct: 537 KRGF 540


>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g56690, mitochondrial; Flags: Precursor
 gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
 gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 272/787 (34%), Positives = 410/787 (52%), Gaps = 92/787 (11%)

Query: 24  RYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRL 83
           R T+     V  + +++R     S  G+I+EA + F+ +  +   +WN++++ Y ++G  
Sbjct: 9   RRTYLTSTGVNCSFEISR----LSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLP 64

Query: 84  REAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLC 143
           +EA++LF+E   +N  +W+ L+ GY    + +EA  +F  M                   
Sbjct: 65  KEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMP------------------ 106

Query: 144 SLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAW 203
                                + N    T +V  Y +   + EAE LF   P+ +N V+W
Sbjct: 107 ---------------------ERNVVSWTAMVKGYMQEGMVGEAESLFWRMPE-RNEVSW 144

Query: 204 TTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS 263
           T M  G   +G   KA + +  M V+ V ++      +        AR         I  
Sbjct: 145 TVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEAR--------LIFD 196

Query: 264 SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSL 323
              E NV   + +I  Y +   +D AR+L E      EVSW SM++G+   G  ++A   
Sbjct: 197 EMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEF 256

Query: 324 FKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK 383
           F+ M  +           V+ C                             NA+I  + +
Sbjct: 257 FEVMPMK----------PVIAC-----------------------------NAMIVGFGE 277

Query: 384 QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSI 443
            G +  A  VF+LM+D+D  +W  +I      G   EAL  F+ M+  G+ P    + SI
Sbjct: 278 VGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISI 337

Query: 444 LSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDV 503
           LS CA L  L++G+QVHA  ++      + V + L+ +Y KCG +  A  VFD   ++D+
Sbjct: 338 LSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDI 397

Query: 504 ITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFES 563
           I W ++I G A +G G+EAL+ + +M + GT P+ +T + +L ACS+AG  E     FES
Sbjct: 398 IMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFES 457

Query: 564 MDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
           M+  + + P  +HY+C +D+LGR+G++ +A  L++ M  +PDATVW ALL AC+ H  L+
Sbjct: 458 MESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLD 517

Query: 624 LGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETN 683
           L E AA  LFE EP NA  YV LS++ ++  KW D A VRK M++  + K PGCSW+E  
Sbjct: 518 LAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVG 577

Query: 684 SQVHIFISED-RGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHS 742
            +VH+F     + HP +  I   +++   L++EAGY PD +  LH+V+EE K   L+ HS
Sbjct: 578 KKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHS 637

Query: 743 EKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGN 802
           E+LAVA+GLL LP+G PIR+ KNLRVCGDCH A+K IS V  R IILRD+NRFHHF  G 
Sbjct: 638 ERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGE 697

Query: 803 CSCGDYW 809
           CSC DYW
Sbjct: 698 CSCRDYW 704


>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g13270, chloroplastic; Flags: Precursor
 gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
 gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 752

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 248/697 (35%), Positives = 381/697 (54%), Gaps = 13/697 (1%)

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EAFE   +M   G   S Y+   +   C     L  G   H        + +  +   ++
Sbjct: 66  EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVL 125

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
            MY +C+ + +A+ LF    +  N V+ TTMI+ Y++ G   KA+  F  M   G +   
Sbjct: 126 QMYCECRSLEDADKLFDEMSE-LNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPS 184

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
             + ++L +     A DFG Q+H  ++ +G  +N  +++ +++MY KCG L  A+R+ + 
Sbjct: 185 SMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQ 244

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
             +   V+   ++VG+ + G  ++AL LF  +    ++ D F +  VL   AS  +LN  
Sbjct: 245 MAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLG 304

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           K +H+ + K G E    V   L+D Y K  + + A   F  +++ + +SW+++I+G    
Sbjct: 305 KQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQM 364

Query: 416 GSYEEALKYFSDMRISGICP-DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
             +EEA+K F  +R       +    +SI  AC+ L     G QVHA  +K     S   
Sbjct: 365 SQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYG 424

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
           +++L+ +Y+KCGC++DAN VF+SM   D++ WTA I G A  G   EAL+ +++M++ G 
Sbjct: 425 ESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGM 484

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAK 594
           KP+ +TF+ +L ACSHAGL E  +   ++M + Y + P  DHY CMID+  RSG L EA 
Sbjct: 485 KPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEAL 544

Query: 595 ALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAG 654
             +  M  EPDA  WK  LS C  H +LELGE A   L +L+P +   YV   N+Y+ AG
Sbjct: 545 KFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAG 604

Query: 655 KWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIK 714
           KWE+AA + KLM  R ++KE  CSW++   ++H FI  D+ HP   +IY K+ E      
Sbjct: 605 KWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEF----- 659

Query: 715 EAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTL--PQGAPIRIFKNLRVCGDC 772
             G++    F  +  E   +   L  HSE+LA+AFGL+++     API++FKNLR C DC
Sbjct: 660 -DGFMEGDMFQCNMTERREQ---LLDHSERLAIAFGLISVHGNAPAPIKVFKNLRACPDC 715

Query: 773 HTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           H   K++S V    I++RDS RFHHFK G CSC DYW
Sbjct: 716 HEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 137/447 (30%), Positives = 233/447 (52%), Gaps = 6/447 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++  Y     L +A KLF+E    N  + +++I  Y+  G+  +A  LF  M   G +
Sbjct: 122 NCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDK 181

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P       +L+       L  G Q H + I+     N  + TG+V+MY KC  +  A+ +
Sbjct: 182 PPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRV 241

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F      K  VA T ++ GY+Q G    A++ F D+  EGVE + F F  +L ACA++  
Sbjct: 242 FDQMA-VKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEE 300

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            + G Q+H C+   G E+ V V + L+D Y KC   +SA R  +     N+VSW+++I G
Sbjct: 301 LNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISG 360

Query: 311 FARQGFHKEALSLFKKMHARDIKI-DDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           + +    +EA+  FK + +++  I + FTY S+    +   D N    VH+  +K    G
Sbjct: 361 YCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIG 420

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
            ++  +ALI MY+K G LD A  VF  M + D+++WT+ I+G AY+G+  EAL+ F  M 
Sbjct: 421 SQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMV 480

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD--NSLVLVYAKCGC 487
             G+ P+ V   ++L+AC+   ++E G+      L+    +  ++D  + ++ +YA+ G 
Sbjct: 481 SCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAP-TIDHYDCMIDIYARSGL 539

Query: 488 INDANRVFDSM-HTRDVITWTALIMGC 513
           +++A +   +M    D ++W   + GC
Sbjct: 540 LDEALKFMKNMPFEPDAMSWKCFLSGC 566


>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 348/569 (61%)

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           IL  CA       G   H  IL  G + ++   + LI+MY+KCG +D AR++ +     +
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
            VSWN+MI    + G   EAL L  +M        +FT  SVL   A+   L+  + +H+
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
             +K   +   FV  AL+D+YAK G +  A  VF  M D+ V++W+S+  G   +  YE+
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
           AL  F     +G+  D  ++SS++ ACA L  +  G+Q++A+  KSG CS++ V +SL+ 
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLID 309

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           +YAKCG I ++ +VF  +  R+V+ W A+I G +++ +  E +  +++M   G  P+ +T
Sbjct: 310 MYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVT 369

Query: 541 FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
           FV +L AC H GL    + YF+ M K + + P   HY+CM+D L R+G++ EA  L+ ++
Sbjct: 370 FVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKL 429

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAA 660
                A++W +LL++CR HG+LEL E AA  LF++EP N+  Y+ LSNMY+  GKW++ A
Sbjct: 430 PFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVA 489

Query: 661 RVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
           ++RKL+K   ++KE G SW+E   +VH+F+  +R HP   +IYSK++E+M  +++ GY  
Sbjct: 490 KMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKV 549

Query: 721 DMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYIS 780
           +    LH V E  K+  L +HSEKLA   GLL LP  APIRI KNLR+CGDCH+ MK  S
Sbjct: 550 ETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLAS 609

Query: 781 AVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             + R +I+RD+NRFHHFK G CSCGD+W
Sbjct: 610 KFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/358 (32%), Positives = 194/358 (54%), Gaps = 3/358 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D  T N +I  Y+  G +  A+++F+E P ++  +W+++I   +  G + EA +L  QMQ
Sbjct: 98  DLLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQ 157

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            EG   S++T+ +VL  C+ K  L   +  H +AIK   DLN FV T L+D+YAKC  + 
Sbjct: 158 REGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMK 217

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A  +F+  PD ++ V W++M  GY QN    +A+  FR     G++ +QF   S++ AC
Sbjct: 218 DAVCVFESMPD-RSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICAC 276

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A ++A   G Q++  +  SGF +N++V S+LIDMYAKCG ++ + ++    E  N V WN
Sbjct: 277 AGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWN 336

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +MI G +R     E + LF+KM    +  +D T+ SVL+       +   +    L+ K 
Sbjct: 337 AMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKE 396

Query: 366 -GFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
                  F  + ++D  ++ G +  A+ ++  L  +     W SL+  C  HG+ E A
Sbjct: 397 HHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTHGNLELA 454



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 199/385 (51%), Gaps = 11/385 (2%)

Query: 78  ANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYT-- 135
           +NSGR RE  K       K  F + SL    + +   + +     + +    +    T  
Sbjct: 11  SNSGRYREKGK------GKRIFQFLSLRVCTTQFFASLSSSSCIVECEKPTTKDFNATHV 64

Query: 136 --LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKM 193
             +  +L+LC+ + LL +G+  H   +      +      L++MY+KC  +  A  +F  
Sbjct: 65  SFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDE 124

Query: 194 FPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDF 253
            P  ++ V+W TMI   +QNG   +A++    M+ EG   ++FT  S+L ACAA  A   
Sbjct: 125 MP-SRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSE 183

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
              +H   + +  + NV+V +AL+D+YAKCG +  A  + E     + V+W+SM  G+ +
Sbjct: 184 CQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQ 243

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
              +++AL+LF+K     +K D F   SV+   A    +   K +++L+ K+GF    FV
Sbjct: 244 NEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFV 303

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
            ++LIDMYAK G ++ ++ VF  ++ ++V+ W ++I+G + H    E +  F  M+  G+
Sbjct: 304 ASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGL 363

Query: 434 CPDHVVVSSILSACAELTVLEFGQQ 458
            P+ V   S+LSAC  + ++  GQ+
Sbjct: 364 SPNDVTFVSVLSACGHMGLVRKGQK 388



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 121/256 (47%), Gaps = 7/256 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D + F    ++  YA  G +++A  +F   P ++  TWSS+  GY    +  +A  LF +
Sbjct: 197 DLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRK 256

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
               G +  Q+ + +V+  C+    +  G+Q +    K+ F  N FV + L+DMYAKC  
Sbjct: 257 AWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGG 316

Query: 184 IFEAEYLFKMFPD--GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
           I E+   +K+F D   +N V W  MI+G S++    + +  F  M+  G+  N  TF S+
Sbjct: 317 IEES---YKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSV 373

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEA-NVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           L+AC  +     G +    +      A NV+  S ++D  ++ G +  A  L+     + 
Sbjct: 374 LSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNA 433

Query: 301 EVS-WNSMIVGFARQG 315
             S W S++      G
Sbjct: 434 SASMWGSLLASCRTHG 449



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 16/180 (8%)

Query: 440 VSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH 499
           V  IL  CA+  +L  G+  HA  L  G  + L   N L+ +Y+KCG ++ A +VFD M 
Sbjct: 67  VHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMP 126

Query: 500 TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC-SHAGLAENAR 558
           +R +++W  +I    QNG+  EAL    QM   GT     T   +L AC +   L+E   
Sbjct: 127 SRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQL 186

Query: 559 WYFESMDKVYGIKPGPDH----YACMIDLLGRSGKLIEAKALLDQMVGEPDATV--WKAL 612
            +       + IK   D        ++D+  + G + +A  + + M   PD +V  W ++
Sbjct: 187 LH------AFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESM---PDRSVVTWSSM 237


>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
 gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
          Length = 706

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 271/771 (35%), Positives = 409/771 (53%), Gaps = 86/771 (11%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +   + +G I+ A   FE M  R   ++N ++A Y  +     A  LF   P ++  
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           ++++LI G S     +   +    +    + PS  +  ++LR     GLL    +     
Sbjct: 81  SYNALISGLSLRRQTLP--DAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQM 138

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
            +        ++ GL+D       + EA  LF   PD ++ VAWT M++GY Q G   +A
Sbjct: 139 PERNHVSYTVLLGGLLD----AGRVNEARRLFDEMPD-RDVVAWTAMLSGYCQAGRITEA 193

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
              F +M                                        + NV   +A+I  
Sbjct: 194 RALFDEMP---------------------------------------KRNVVSWTAMISG 214

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           YA+ G+++ AR+L E     NEVSW +M+VG+ + G  ++A  LF  M           +
Sbjct: 215 YAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMP---------EH 265

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
           P V  C                             NA++  + ++G +D A  VF  M +
Sbjct: 266 P-VAAC-----------------------------NAMMVGFGQRGMVDAAKTVFEKMCE 295

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           +D  +W+++I     +    EAL  F +M   G+ P++  V SIL+ CA L VL++G++V
Sbjct: 296 RDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREV 355

Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKG 519
           HA  L+      +   ++L+ +Y KCG ++ A RVF +   +D++ W ++I G AQ+G G
Sbjct: 356 HAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLG 415

Query: 520 KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC 579
           ++AL  +  M   G  PD IT++G L ACS+ G  +  R  F SM     I+PG +HY+C
Sbjct: 416 EQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSC 475

Query: 580 MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMN 639
           M+DLLGRSG + EA  L+  M  EPDA +W AL+ ACR+H + E+ E AA  L ELEP N
Sbjct: 476 MVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGN 535

Query: 640 AMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISED-RGHPL 698
           A PYV LS++Y++ G+WEDA+++RK + SR + K PGCSW+E + +VH+F S D   HP 
Sbjct: 536 AGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPE 595

Query: 699 RTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA 758
              I   ++++  L+ E+GY  D +F LH+++EE K   L YHSE+ AVA+GLL +P+G 
Sbjct: 596 HAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGM 655

Query: 759 PIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           PIR+ KNLRVCGDCH+A+K I+ +  R IILRD+NRFHHFK G CSC DYW
Sbjct: 656 PIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 34/276 (12%)

Query: 35  PASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP 94
           P +  N  +V F   G +D A  +FEKM +RD  TW+ MI AY  +  L EA   F    
Sbjct: 266 PVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFR--- 322

Query: 95  FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ 154
                                   E+ W+    G RP+  ++ ++L +C+   +L  G +
Sbjct: 323 ------------------------EMLWR----GVRPNYPSVISILTVCAALAVLDYGRE 354

Query: 155 FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
            H   ++  FD++ F V+ L+ MY KC  + +A+ +F  F + K+ V W +MITGY+Q+G
Sbjct: 355 VHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTF-EPKDIVMWNSMITGYAQHG 413

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV-HGCILSSGFEANVYVQ 273
            G +A+  F DMR+ G+  +  T+   LTAC+       G ++ +   ++S         
Sbjct: 414 LGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHY 473

Query: 274 SALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
           S ++D+  + G ++ A  L++   ++ + V W +++
Sbjct: 474 SCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALM 509


>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
 gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
 gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 705

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 275/751 (36%), Positives = 407/751 (54%), Gaps = 74/751 (9%)

Query: 69  TWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG 128
           T N  I   +  G++ EA+KLF+    K+  +W+S++ GY    +  +A +LF +M    
Sbjct: 19  TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM---- 74

Query: 129 YRPSQYTLDNVLRLCSL-KGLLQRGEQFHGYAIKTCFDL----NAFVVTGLVDMYAKCKC 183
             P +    N++    L  G ++ GE       +  FDL    N    T LV  Y     
Sbjct: 75  --PDR----NIISWNGLVSGYMKNGEIDEA---RKVFDLMPERNVVSWTALVKGYVHNGK 125

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +  AE LF   P+ KN V+WT M+ G+ Q+G    A + +  +     + +     S++ 
Sbjct: 126 VDVAESLFWKMPE-KNKVSWTVMLIGFLQDGRIDDACKLYEMIP----DKDNIARTSMIH 180

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
                   D   +    I     E +V   + ++  Y +   +D AR++ +      EVS
Sbjct: 181 GLCKEGRVDEARE----IFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVS 236

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           W SM++G+ + G  ++A  LF+ M  +           V+ C                  
Sbjct: 237 WTSMLMGYVQNGRIEDAEELFEVMPVK----------PVIAC------------------ 268

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
                      NA+I    ++G +  A  VF+ M++++  SW ++I     +G   EAL 
Sbjct: 269 -----------NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALD 317

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            F  M+  G+ P    + SILS CA L  L  G+QVHA  ++      + V + L+ +Y 
Sbjct: 318 LFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYI 377

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM-LARGTKPDYITFV 542
           KCG +  +  +FD   ++D+I W ++I G A +G G+EAL+ + +M L+  TKP+ +TFV
Sbjct: 378 KCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFV 437

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
             L ACS+AG+ E     +ESM+ V+G+KP   HYACM+D+LGR+G+  EA  ++D M  
Sbjct: 438 ATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTV 497

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
           EPDA VW +LL ACR H  L++ E  A  L E+EP N+  Y+ LSNMY++ G+W D A +
Sbjct: 498 EPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAEL 557

Query: 663 RKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG----HPLRTDIYSKIDEIMLLIKEAGY 718
           RKLMK+R +RK PGCSW E  ++VH F    RG    HP +  I   +DE+  L++EAGY
Sbjct: 558 RKLMKTRLVRKSPGCSWTEVENKVHAFT---RGGINSHPEQESILKILDELDGLLREAGY 614

Query: 719 VPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKY 778
            PD ++ALH+V+EE K   L YHSE+LAVA+ LL L +G PIR+ KNLRVC DCHTA+K 
Sbjct: 615 NPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKI 674

Query: 779 ISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           IS V  R IILRD+NRFHHF+ G CSC DYW
Sbjct: 675 ISKVKEREIILRDANRFHHFRNGECSCKDYW 705



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 132/477 (27%), Positives = 228/477 (47%), Gaps = 53/477 (11%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +  +GEIDEA ++F+ M +R+  +W  ++  Y ++G++  A+ LF + P KN  +W+ ++
Sbjct: 89  YMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVML 148

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI-KTCF 164
            G+   G   +A +L+  +      P +   DN+ R   + GL + G       I     
Sbjct: 149 IGFLQDGRIDDACKLYEMI------PDK---DNIARTSMIHGLCKEGRVDEAREIFDEMS 199

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
           + +    T +V  Y +   + +A  +F + P+ K  V+WT+M+ GY QNG    A E F 
Sbjct: 200 ERSVITWTTMVTGYGQNNRVDDARKIFDVMPE-KTEVSWTSMLMGYVQNGRIEDAEELFE 258

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
            M V+ V            AC                            +A+I    + G
Sbjct: 259 VMPVKPV-----------IAC----------------------------NAMISGLGQKG 279

Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
           ++  ARR+ +  +  N+ SW ++I    R GF  EAL LF  M  + ++    T  S+L+
Sbjct: 280 EIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILS 339

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
             AS   L++ K VH+ +V+  F+   +V + L+ MY K G L  + ++F+    KD+I 
Sbjct: 340 VCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIM 399

Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGIC-PDHVVVSSILSACAELTVLEFGQQVHAVF 463
           W S+I+G A HG  EEALK F +M +SG   P+ V   + LSAC+   ++E G +++   
Sbjct: 400 WNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESM 459

Query: 464 LKSGGCSSLSVDNS-LVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGK 518
               G   ++   + +V +  + G  N+A  + DSM    D   W +L+  C  + +
Sbjct: 460 ESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQ 516



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 150/269 (55%), Gaps = 4/269 (1%)

Query: 43  LVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWS 102
           L+ +  +G I++A +LFE M  +     N MI+     G + +A+++F+    +N  +W 
Sbjct: 241 LMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQ 300

Query: 103 SLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT 162
           ++I  +   G ++EA +LF  MQ +G RP+  TL ++L +C+    L  G+Q H   ++ 
Sbjct: 301 TVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRC 360

Query: 163 CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIEC 222
            FD++ +V + L+ MY KC  + +++ +F  FP  K+ + W ++I+GY+ +G G +A++ 
Sbjct: 361 QFDVDVYVASVLMTMYIKCGELVKSKLIFDRFP-SKDIIMWNSIISGYASHGLGEEALKV 419

Query: 223 FRDMRVEG-VESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMY 280
           F +M + G  + N+ TF + L+AC+     + G +++  + S  G +      + ++DM 
Sbjct: 420 FCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDML 479

Query: 281 AKCGDLDSARRLLEYSEIDNEVS-WNSMI 308
            + G  + A  +++   ++ + + W S++
Sbjct: 480 GRAGRFNEAMEMIDSMTVEPDAAVWGSLL 508


>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
          Length = 798

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 270/771 (35%), Positives = 407/771 (52%), Gaps = 86/771 (11%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +   + +G I+ A   FE M  R   ++N ++A Y  +     A  LF   P ++  
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           ++++LI G S     +   +    +    + PS  +  ++LR     GLL    +     
Sbjct: 81  SYNALISGLSLRRQTLP--DAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQM 138

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
            +        ++ GL+D       + EA  LF   PD ++ VAWT M++GY Q G   +A
Sbjct: 139 PERNHVSYTVLLGGLLD----AGRVNEARRLFDEMPD-RDVVAWTAMLSGYCQAGRITEA 193

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
              F +M                                        + NV   +A+I  
Sbjct: 194 RALFDEMP---------------------------------------KRNVVSWTAMISG 214

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           YA+ G+++ AR+L E     NEVSW +M+VG+ + G  ++A  LF  M            
Sbjct: 215 YAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEH--------- 265

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
             V  C                             NA++  + ++G +D A  VF  M +
Sbjct: 266 -PVAAC-----------------------------NAMMVGFGQRGMVDAAKTVFEKMCE 295

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           +D  +W+++I     +    EAL  F +M   G+ P++  V SIL+ CA L VL++G++V
Sbjct: 296 RDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREV 355

Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKG 519
           HA  L+      +   ++L+ +Y KCG ++ A RVF +   +D++ W ++I G AQ+G G
Sbjct: 356 HAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLG 415

Query: 520 KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC 579
           ++AL  +  M   G  PD IT++G L ACS+ G  +  R  F SM     I+PG +HY+C
Sbjct: 416 EQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSC 475

Query: 580 MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMN 639
           M+DLLGRSG + EA  L+  M  EPDA +W AL+ ACR+H + E+ E AA  L ELEP N
Sbjct: 476 MVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGN 535

Query: 640 AMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISED-RGHPL 698
           A PYV LS++Y++ G+WEDA+++RK + SR + K PGCSW+E + +VH+F S D   HP 
Sbjct: 536 AGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPE 595

Query: 699 RTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA 758
              I   ++++  L+ E+GY  D +F LH+++EE K   L YHSE+ AVA+GLL +P+G 
Sbjct: 596 HAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGM 655

Query: 759 PIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           PIR+ KNLRVCGDCH+A+K I+ +  R IILRD+NRFHHFK G CSC DYW
Sbjct: 656 PIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 135/276 (48%), Gaps = 34/276 (12%)

Query: 35  PASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP 94
           P +  N  +V F   G +D A  +FEKM +RD  TW+ MI AY  +  L EA   F    
Sbjct: 266 PVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFR--- 322

Query: 95  FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ 154
                                   E+ W+    G RP+  ++ ++L +C+   +L  G +
Sbjct: 323 ------------------------EMLWR----GVRPNYPSVISILTVCAALAVLDYGRE 354

Query: 155 FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
            H   ++  FD++ F V+ L+ MY KC  + +A+ +F  F + K+ V W +MITGY+Q+G
Sbjct: 355 VHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTF-EPKDIVMWNSMITGYAQHG 413

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV-HGCILSSGFEANVYVQ 273
            G +A+  F DMR+ G+  +  T+   LTAC+       G ++ +   ++S         
Sbjct: 414 LGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHY 473

Query: 274 SALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
           S ++D+  + G ++ A  L++   ++ + V W +++
Sbjct: 474 SCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALM 509


>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Glycine max]
          Length = 849

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 248/657 (37%), Positives = 388/657 (59%), Gaps = 2/657 (0%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           +D +   ++I  YA  G + EA+ +F+    K   TW+++I GY+  G    + +LF QM
Sbjct: 187 QDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQM 246

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
           +     P +Y + +VL  CS+   L+ G+Q HGY ++  FD++  VV G++D Y KC  +
Sbjct: 247 REGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKV 306

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
                LF    D K+ V+WTTMI G  QN +   A++ F +M  +G + + F   S+L +
Sbjct: 307 KTGRKLFNRLVD-KDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNS 365

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C ++ A   G QVH   +    + + +V++ LIDMYAKC  L +AR++ +     N VS+
Sbjct: 366 CGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSY 425

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N+MI G++RQ    EAL LF++M          T+ S+L   +S   L  +  +H LI+K
Sbjct: 426 NAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIK 485

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            G     F  +ALID+Y+K   +  A +VF  + D+D++ W ++ +G +     EE+LK 
Sbjct: 486 FGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKL 545

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           + D+++S + P+    +++++A + +  L  GQQ H   +K G      V NSLV +YAK
Sbjct: 546 YKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAK 605

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG I ++++ F S + RD+  W ++I   AQ+G   +AL+ +++M+  G KP+Y+TFVGL
Sbjct: 606 CGSIEESHKAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGL 665

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L ACSHAGL +    +FESM K +GI+PG DHYACM+ LLGR+GK+ EAK  + +M  +P
Sbjct: 666 LSACSHAGLLDLGFHHFESMSK-FGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKP 724

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
            A VW++LLSACRV G +ELG  AA      +P ++  Y+ LSN++++ G W     VR+
Sbjct: 725 AAVVWRSLLSACRVSGHVELGTYAAEMAISCDPADSGSYILLSNIFASKGMWASVRMVRE 784

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPD 721
            M    + KEPG SW+E N++VH FI+ D  H   T I   +D ++L IK  GYVP+
Sbjct: 785 KMDMSRVVKEPGWSWIEVNNEVHRFIARDTAHRDSTLISLVLDNLILQIKGFGYVPN 841



 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 194/619 (31%), Positives = 318/619 (51%), Gaps = 19/619 (3%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ-M 124
           D F  NT++ AY+      +A+KLF+  P +N  TWSS++  Y+ +G  +EA  LF + M
Sbjct: 86  DVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFM 145

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
           +    +P++Y L +V+R C+  G L +  Q HG+ +K  F  + +V T L+D YAK   +
Sbjct: 146 RSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYV 205

Query: 185 FEAEYLFKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
            EA  +F    DG   K  V WT +I GY++ G    +++ F  MR   V  +++   S+
Sbjct: 206 DEARLIF----DGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSV 261

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           L+AC+ +   + G Q+HG +L  GF+ +V V + +ID Y KC  + + R+L       + 
Sbjct: 262 LSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDV 321

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           VSW +MI G  +  FH +A+ LF +M  +  K D F   SVLN   S   L   + VH+ 
Sbjct: 322 VSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAY 381

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
            +K   +   FV N LIDMYAK  +L  A  VF+L+   +V+S+ ++I G +      EA
Sbjct: 382 AIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEA 441

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           L  F +MR+S   P  +   S+L   + L +LE   Q+H + +K G        ++L+ V
Sbjct: 442 LDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDV 501

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           Y+KC C+ DA  VF+ ++ RD++ W A+  G +Q  + +E+L+ Y  +     KP+  TF
Sbjct: 502 YSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTF 561

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
             ++ A S+     + + +   + K+ G+   P     ++D+  + G + E+        
Sbjct: 562 AAVIAAASNIASLRHGQQFHNQVIKM-GLDDDPFVTNSLVDMYAKCGSIEESHKAFSS-T 619

Query: 602 GEPDATVWKALLSACRVHGD----LELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWE 657
            + D   W +++S    HGD    LE+ ER    + E    N + +V L +  S AG  +
Sbjct: 620 NQRDIACWNSMISTYAQHGDAAKALEVFERM---IMEGVKPNYVTFVGLLSACSHAGLLD 676

Query: 658 DAARVRKLMKSRGIRKEPG 676
                 + M   GI  EPG
Sbjct: 677 LGFHHFESMSKFGI--EPG 693



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 150/521 (28%), Positives = 262/521 (50%), Gaps = 6/521 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G +  +  D D    N +I  Y    +++  +KLFN    K+  +W+++I G        
Sbjct: 279 GYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHG 338

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           +A +LF +M  +G++P  +   +VL  C     LQ+G Q H YAIK   D + FV  GL+
Sbjct: 339 DAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLI 398

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMYAKC  +  A  +F +     N V++  MI GYS+     +A++ FR+MR+       
Sbjct: 399 DMYAKCDSLTNARKVFDLVA-AINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTL 457

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            TF S+L   +++   +  +Q+H  I+  G   + +  SALID+Y+KC  +  AR + E 
Sbjct: 458 LTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEE 517

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               + V WN+M  G+++Q  ++E+L L+K +    +K ++FT+ +V+   ++   L + 
Sbjct: 518 IYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHG 577

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           +  H+ ++K G +   FV N+L+DMYAK G+++ +   F+    +D+  W S+I+  A H
Sbjct: 578 QQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQH 637

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G   +AL+ F  M + G+ P++V    +LSAC+   +L+ G        K G    +   
Sbjct: 638 GDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGFHHFESMSKFGIEPGIDHY 697

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRD-VITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
             +V +  + G I +A      M  +   + W +L+  C  +G  +  L  Y   +A   
Sbjct: 698 ACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLLSACRVSGHVE--LGTYAAEMAISC 755

Query: 535 KP-DYITFVGLLFACSHAGLAENARWYFESMDKVYGIK-PG 573
            P D  +++ L    +  G+  + R   E MD    +K PG
Sbjct: 756 DPADSGSYILLSNIFASKGMWASVRMVREKMDMSRVVKEPG 796



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 36/180 (20%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           +  +LVD ++  G I+E+ + F   + RD   WN+MI+ YA  G   +A K         
Sbjct: 595 VTNSLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQHG---DAAK--------- 642

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                              A E+F +M +EG +P+  T   +L  CS  GLL  G  FH 
Sbjct: 643 -------------------ALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLG--FHH 681

Query: 158 YAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGY 215
           +   + F +   +     +V +  +   I+EA+   K  P     V W ++++    +G+
Sbjct: 682 FESMSKFGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLLSACRVSGH 741


>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 235/669 (35%), Positives = 385/669 (57%), Gaps = 1/669 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           + D  T + ++  Y+   +L +A ++F E P +N   WS++I GY      IE  +LF  
Sbjct: 170 ENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKD 229

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M   G   SQ T  +V R C+     + G Q HG+A+K+ F  ++ + T  +DMYAKC+ 
Sbjct: 230 MLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCER 289

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +F+A  +F   P+     ++  +I GY++   G KA++ F+ ++   +  ++ +    LT
Sbjct: 290 MFDAWKVFNTLPNPPRQ-SYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALT 348

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC+ +     G Q+HG  +  G   N+ V + ++DMY KCG L  A  + E  E  + VS
Sbjct: 349 ACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVS 408

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN++I    +     + LSLF  M    ++ DDFTY SV+   A    LN    +H  I+
Sbjct: 409 WNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRII 468

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K+G     FV +AL+DMY K G L  A  +   +++K  +SW S+I+G +     E A +
Sbjct: 469 KSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQR 528

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
           YFS M   GI PD+   +++L  CA +  +E G+Q+HA  LK    S + + ++LV +Y+
Sbjct: 529 YFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYS 588

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG + D+  +F+    RD +TW+A+I   A +G G++A+  +++M     KP++  F+ 
Sbjct: 589 KCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFIS 648

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           +L AC+H G  +    YF+ M   YG+ P  +HY+CM+DLLGRSG++ EA  L++ M  E
Sbjct: 649 VLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFE 708

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
            D  +W+ LLS C++ G++E+ E+A N+L +L+P ++  YV L+N+Y+  G W + A++R
Sbjct: 709 ADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYAIVGMWGEVAKMR 768

Query: 664 KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMN 723
            +MK+  ++KEPGCSW+E   +VH F+  D+ HP   +IY +   ++  +K AGYVPD++
Sbjct: 769 SIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWAGYVPDID 828

Query: 724 FALHNVEEE 732
           F L    EE
Sbjct: 829 FMLDEEMEE 837



 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 175/630 (27%), Positives = 318/630 (50%), Gaps = 13/630 (2%)

Query: 18  KIIGPARYTHN--VGNSVKPASDLNRALVDF-SNSGEIDEAGQLFEKMSDRDGFTWNTMI 74
           K + P +  H   +     P   +   L+ F   S +++ A ++F++M  RD  +WNT+I
Sbjct: 20  KALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRMPQRDVISWNTLI 79

Query: 75  AAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQY 134
             YA  G +  A+ LF+  P ++  +W+SL+  Y + G++ ++ E+F +M+         
Sbjct: 80  FGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYA 139

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
           T   +L+ CS       G Q H  AI+  F+ +    + LVDMY+KCK + +A  +F+  
Sbjct: 140 TFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREM 199

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
           P+ +N V W+ +I GY QN    + ++ F+DM   G+  +Q T+ S+  +CA +SA   G
Sbjct: 200 PE-RNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLG 258

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
            Q+HG  L S F  +  + +A +DMYAKC  +  A ++          S+N++IVG+ARQ
Sbjct: 259 TQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQ 318

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
               +AL +F+ +   ++  D+ +    L   +          +H L VK G      V 
Sbjct: 319 DQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVA 378

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           N ++DMY K G L  A ++F  M+ +D +SW ++I     +    + L  F  M  S + 
Sbjct: 379 NTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTME 438

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           PD     S++ ACA    L +G ++H   +KSG      V ++LV +Y KCG + +A ++
Sbjct: 439 PDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKI 498

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
              +  +  ++W ++I G +   + + A +++ QML  G  PD  T+  +L  C++    
Sbjct: 499 HARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATI 558

Query: 555 ENARWYFESMDKVYGIKPGPDHY--ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
           E  +   +   ++  ++   D Y  + ++D+  + G + +++ + ++   + D   W A+
Sbjct: 559 ELGK---QIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEK-APKRDYVTWSAM 614

Query: 613 LSACRVHGDLELGERAANNLFELEPMNAMP 642
           + A   HG   LGE+A N   E++ +N  P
Sbjct: 615 ICAYAYHG---LGEKAINLFEEMQLLNVKP 641



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 144/536 (26%), Positives = 246/536 (45%), Gaps = 38/536 (7%)

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC------IFE 186
           + T  ++L+ CS    L  G+Q H   I T F    +V   L+  Y K         +F+
Sbjct: 6   KLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFD 65

Query: 187 -------------------------AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIE 221
                                    A+ LF   P+ ++ V+W ++++ Y  NG   K+IE
Sbjct: 66  RMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPE-RDVVSWNSLLSCYLHNGVNRKSIE 124

Query: 222 CFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYA 281
            F  MR   +  +  TF  IL AC+ +     G QVH   +  GFE +V   SAL+DMY+
Sbjct: 125 IFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYS 184

Query: 282 KCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPS 341
           KC  LD A R+       N V W+++I G+ +     E L LFK M    + +   TY S
Sbjct: 185 KCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYAS 244

Query: 342 VLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
           V    A          +H   +K+ F     +  A +DMYAK   +  A+ VFN + +  
Sbjct: 245 VFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPP 304

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
             S+ ++I G A      +AL  F  ++ + +  D + +S  L+AC+ +     G Q+H 
Sbjct: 305 RQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHG 364

Query: 462 VFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKE 521
           + +K G   ++ V N+++ +Y KCG + +A  +F+ M  RD ++W A+I    QN +  +
Sbjct: 365 LAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVK 424

Query: 522 ALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY--AC 579
            L  +  ML    +PD  T+  ++ AC  AG  +   +  E   ++     G D +  + 
Sbjct: 425 TLSLFVSMLRSTMEPDDFTYGSVVKAC--AG-QQALNYGTEIHGRIIKSGMGLDWFVGSA 481

Query: 580 MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
           ++D+ G+ G L+EA+ +  ++  E     W +++S        E  +R  + + E+
Sbjct: 482 LVDMYGKCGMLMEAEKIHARL-EEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEM 536



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 204/424 (48%), Gaps = 53/424 (12%)

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
           + + TF  IL  C+ + A + G QVH  ++ +GF   +YV + L+  Y K   ++ A ++
Sbjct: 4   TKKLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKV 63

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN--- 349
            +     + +SWN++I G+A  G    A SLF  M  RD+     ++ S+L+C+  N   
Sbjct: 64  FDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDV----VSWNSLLSCYLHNGVN 119

Query: 350 -------IDLNNAK-------------------------SVHSLIVKTGFEGYKFVNNAL 377
                  + + + K                          VH L ++ GFE      +AL
Sbjct: 120 RKSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSAL 179

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           +DMY+K   LD AF VF  M +++++ W+++I G   +  + E LK F DM   G+    
Sbjct: 180 VDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQ 239

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
              +S+  +CA L+  + G Q+H   LKS       +  + + +YAKC  + DA +VF++
Sbjct: 240 STYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNT 299

Query: 498 MHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENA 557
           +      ++ A+I+G A+  +G +AL  +  +       D I+  G L ACS        
Sbjct: 300 LPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACS------VI 353

Query: 558 RWYFESMDKVYG--IKPGPDHYAC----MIDLLGRSGKLIEAKALLDQMVGEPDATVWKA 611
           + + E + +++G  +K G     C    ++D+ G+ G L+EA  + ++M    DA  W A
Sbjct: 354 KRHLEGI-QLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEM-ERRDAVSWNA 411

Query: 612 LLSA 615
           +++A
Sbjct: 412 IIAA 415



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 144/294 (48%), Gaps = 4/294 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G++ +     D F  + ++  Y   G L EA+K+      K   +W+S+I G+S+     
Sbjct: 465 GRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSE 524

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
            A   F QM   G  P  YT   VL +C+    ++ G+Q H   +K     + ++ + LV
Sbjct: 525 NAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLV 584

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMY+KC  + ++  +F+  P  +++V W+ MI  Y+ +G G KAI  F +M++  V+ N 
Sbjct: 585 DMYSKCGNMQDSRLMFEKAPK-RDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNH 643

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLE 294
             F S+L ACA +   D G      +LS  G +  +   S ++D+  + G ++ A +L+E
Sbjct: 644 TIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIE 703

Query: 295 YSEID-NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFA 347
               + ++V W +++     QG  + A   F  +   D + D   Y  + N +A
Sbjct: 704 SMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQ-DSSAYVLLANVYA 756


>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Glycine max]
          Length = 686

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 260/663 (39%), Positives = 387/663 (58%), Gaps = 7/663 (1%)

Query: 152 GEQFHGYAIKTC-FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
           G   H + ++T    L +F+   LV+MY+K      A+ +  +  + +  V WT++I+G 
Sbjct: 26  GRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSL-TNPRTVVTWTSLISGC 84

Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV 270
             N     A+  F +MR E V  N FTFP +  A A++     G Q+H   L  G   +V
Sbjct: 85  VHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILDV 144

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
           +V  +  DMY+K G    AR + +     N  +WN+ +    + G   +A++ FKK    
Sbjct: 145 FVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCV 204

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
           D + +  T+ + LN  A  + L   + +H  IV++ +     V N LID Y K G++  +
Sbjct: 205 DGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSS 264

Query: 391 FMVFNLMQD--KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
            +VF+ +    ++V+SW SL+     +   E A   F   R   + P   ++SS+LSACA
Sbjct: 265 ELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQAR-KEVEPTDFMISSVLSACA 323

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
           EL  LE G+ VHA+ LK+    ++ V ++LV +Y KCG I  A +VF  M  R+++TW A
Sbjct: 324 ELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNA 383

Query: 509 LIMGCAQNGKGKEALQFYDQMLAR--GTKPDYITFVGLLFACSHAGLAENARWYFESMDK 566
           +I G A  G    AL  + +M +   G    Y+T V +L ACS AG  E     FESM  
Sbjct: 384 MIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRG 443

Query: 567 VYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGE 626
            YGI+PG +HYAC++DLLGRSG +  A   + +M   P  +VW ALL AC++HG  +LG+
Sbjct: 444 RYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTKLGK 503

Query: 627 RAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQV 686
            AA  LFEL+P ++  +V  SNM ++AG+WE+A  VRK M+  GI+K  G SWV   ++V
Sbjct: 504 IAAEKLFELDPDDSGNHVVFSNMLASAGRWEEATIVRKEMRDIGIKKNVGYSWVAVKNRV 563

Query: 687 HIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLA 746
           H+F ++D  H   ++I + + ++   +K+AGYVPD N +L ++EEE K   + YHSEK+A
Sbjct: 564 HVFQAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPDANLSLFDLEEEEKASEVWYHSEKIA 623

Query: 747 VAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCG 806
           +AFGL+TLP+G PIRI KNLR+C DCH+A+K+IS +  R II+RD+NRFH FK G CSC 
Sbjct: 624 LAFGLITLPRGVPIRITKNLRICIDCHSAIKFISKIVGREIIVRDNNRFHRFKDGWCSCK 683

Query: 807 DYW 809
           DYW
Sbjct: 684 DYW 686



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 136/462 (29%), Positives = 219/462 (47%), Gaps = 14/462 (3%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N ++  Y+       A+ + + T  +   TW+SLI G  +      A   F  M+ E
Sbjct: 44  FLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRE 103

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
              P+ +T   V +  +   +   G+Q H  A+K    L+ FV     DMY+K     EA
Sbjct: 104 CVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEA 163

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F   P  +N   W   ++   Q+G    AI  F+       E N  TF + L ACA 
Sbjct: 164 RNMFDEMPH-RNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACAD 222

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID----NEVS 303
           + + + G Q+HG I+ S +  +V V + LID Y KCGD+ S+   L +S I     N VS
Sbjct: 223 IVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSE--LVFSRIGSGRRNVVS 280

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHAR-DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           W S++    +   H+E  +    + AR +++  DF   SVL+  A    L   +SVH+L 
Sbjct: 281 WCSLLAALVQN--HEEERACMVFLQARKEVEPTDFMISSVLSACAELGGLELGRSVHALA 338

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           +K   E   FV +AL+D+Y K G+++ A  VF  M ++++++W ++I G A+ G  + AL
Sbjct: 339 LKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMAL 398

Query: 423 KYFSDMRIS--GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
             F +M     GI   +V + S+LSAC+    +E G Q+        G    +   + V+
Sbjct: 399 SLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVV 458

Query: 481 -VYAKCGCINDANRVFDSMHTRDVIT-WTALIMGCAQNGKGK 520
            +  + G ++ A      M     I+ W AL+  C  +GK K
Sbjct: 459 DLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTK 500



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 185/390 (47%), Gaps = 12/390 (3%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F   +    Y+ +G   EA+ +F+E P +N  TW++ +      G  ++A   F +  
Sbjct: 143 DVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFL 202

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
                P+  T    L  C+    L+ G Q HG+ +++ +  +  V  GL+D Y KC  I 
Sbjct: 203 CVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIV 262

Query: 186 EAEYLFKMFPDG-KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            +E +F     G +N V+W +++    QN    +A   F   R E VE   F   S+L+A
Sbjct: 263 SSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARKE-VEPTDFMISSVLSA 321

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           CA +   + G  VH   L +  E N++V SAL+D+Y KCG ++ A ++       N V+W
Sbjct: 322 CAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTW 381

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARD--IKIDDFTYPSVLN-CFASNIDLNNAKSVHSL 361
           N+MI G+A  G    ALSLF++M +    I +   T  SVL+ C  +       +   S+
Sbjct: 382 NAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESM 441

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEE 420
             + G E        ++D+  + G +D A+     M     IS W +L+  C  HG  + 
Sbjct: 442 RGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTK- 500

Query: 421 ALKYFSDMRISGICPD----HVVVSSILSA 446
            L   +  ++  + PD    HVV S++L++
Sbjct: 501 -LGKIAAEKLFELDPDDSGNHVVFSNMLAS 529



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 92/207 (44%), Gaps = 21/207 (10%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK---- 96
           ALVD +   G I+ A Q+F +M +R+  TWN MI  YA+ G +  A  LF E        
Sbjct: 352 ALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGI 411

Query: 97  --NFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGE 153
             ++ T  S++   S  G      ++F  M+   G  P       V+ L    GL+ R  
Sbjct: 412 ALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAY 471

Query: 154 QFHGYAIKTCFDLNAFVVTGLV----DMYAKCKC-IFEAEYLFKMFPDGK-NHVAWTTMI 207
           +F    IK    L    V G +     M+ K K     AE LF++ PD   NHV ++ M+
Sbjct: 472 EF----IKRMPILPTISVWGALLGACKMHGKTKLGKIAAEKLFELDPDDSGNHVVFSNML 527

Query: 208 TGYSQNGYGFKAIECFRDMRVEGVESN 234
              +  G   +A    ++MR  G++ N
Sbjct: 528 ---ASAGRWEEATIVRKEMRDIGIKKN 551


>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
          Length = 679

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 250/671 (37%), Positives = 378/671 (56%), Gaps = 27/671 (4%)

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M   G  P      +VL+ C+L   L+ GE  HG  I+     + +    L++MY+K   
Sbjct: 1   MLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWS 60

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA-----IECFRDMRVEGVESNQFTF 238
           + E     + F D K       M+ G  +     K      + C  D RV G++ N    
Sbjct: 61  LEEGG--VQRFCDSK-------MLGGIPEPREIGKCSNSHDLPCELDERVAGIDQN---- 107

Query: 239 PSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI 298
                    +S   +    +  +   G  ++VY +      Y     L S R++ E    
Sbjct: 108 ----GDLNQMSNILYQVNTYKKVFDEGKTSDVYSKKEKESYY-----LGSLRKVFEMMPK 158

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
            + VSWN++I G A+ G H++AL + ++M   D++ D FT  SVL  FA  ++L   K +
Sbjct: 159 RDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEI 218

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           H   ++ G++   F+ ++LIDMYAK   +D +  VF ++   D ISW S+I GC  +G +
Sbjct: 219 HGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMF 278

Query: 419 EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSL 478
           +E LK+F  M I+ I P+HV  SSI+ ACA LT L  G+Q+H   ++S    ++ + ++L
Sbjct: 279 DEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASAL 338

Query: 479 VLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDY 538
           V +YAKCG I  A  +FD M   D+++WTA+IMG A +G   +A+  + +M   G KP+Y
Sbjct: 339 VDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNY 398

Query: 539 ITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLD 598
           + F+ +L ACSHAGL + A  YF SM + Y I PG +HYA + DLLGR G+L EA   + 
Sbjct: 399 VAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFIS 458

Query: 599 QMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWED 658
            M  EP  +VW  LL+ACRVH ++EL E+ +  LF ++P N   YV LSN+YS AG+W+D
Sbjct: 459 DMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKD 518

Query: 659 AARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGY 718
           A ++R  M+ +G++K+P CSW+E  ++VH F++ D+ HP    I   +  ++  ++  GY
Sbjct: 519 ARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGY 578

Query: 719 VPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKY 778
           V D    LH+VEEE K   L  HSE+LA+ FG+++ P G  IR+ KNLRVC DCHTA K+
Sbjct: 579 VLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTPAGTTIRVTKNLRVCVDCHTATKF 638

Query: 779 ISAVYLRHIIL 789
           IS +  R I+ 
Sbjct: 639 ISKIVGREIVF 649



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 225/424 (53%), Gaps = 21/424 (4%)

Query: 15  CRSKIIGPARYTHNVG---NSVKPASDLNRALVDFSNSGEIDEAGQL------FEKMSDR 65
           C SK++G       +G   NS     +L+  +     +G++++   +      ++K+ D 
Sbjct: 70  CDSKMLGGIPEPREIGKCSNSHDLPCELDERVAGIDQNGDLNQMSNILYQVNTYKKVFD- 128

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           +G T +        S  L   +K+F   P ++  +W+++I G +  G+  +A  +  +M 
Sbjct: 129 EGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMG 188

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
               RP  +TL +VL + +    L +G++ HGYAI+  +D + F+ + L+DMYAKC  + 
Sbjct: 189 NADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVD 248

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           ++  +F M P   + ++W ++I G  QNG   + ++ F+ M +  ++ N  +F SI+ AC
Sbjct: 249 DSCRVFYMLPQ-HDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPAC 307

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A ++    G Q+HG I+ S F+ NV++ SAL+DMYAKCG++ +AR + +  E+ + VSW 
Sbjct: 308 AHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWT 367

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLI-- 362
           +MI+G+A  G   +A+SLFK+M    +K +   + +VL  C  + +     K  +S+   
Sbjct: 368 AMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQD 427

Query: 363 --VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYE 419
             +  G E Y     A+ D+  + G L+ A+   + M  +   S W++L+  C  H + E
Sbjct: 428 YRIIPGLEHYA----AVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIE 483

Query: 420 EALK 423
            A K
Sbjct: 484 LAEK 487


>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
          Length = 1068

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 275/738 (37%), Positives = 396/738 (53%), Gaps = 11/738 (1%)

Query: 71   NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
            N++I  Y + GR+ +A K+F+    K+  +W+++I GY   G   +A E++  M+L    
Sbjct: 337  NSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVN 396

Query: 131  PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            P   T+ + L  C+  G L  G + H  A    F     V   L++MYAK K I +A  +
Sbjct: 397  PDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEV 456

Query: 191  FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
            FK   + K+ V+W++MI G+  N   F A+  FR M +  V+ N  TF + L+ACAA  A
Sbjct: 457  FKFMAE-KDVVSWSSMIAGFCFNHRSFDALYYFRYM-LGHVKPNSVTFIAALSACAATGA 514

Query: 251  RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
               G ++H  +L  G  +  YV +AL+D+Y KCG    A          + VSWN M+ G
Sbjct: 515  LRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSG 574

Query: 311  FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
            F   G    ALSLF +M    +                 +D+     +H L    GF  Y
Sbjct: 575  FVAHGLGDIALSLFNQMMYTSLGRMGACSALAACACLGRLDV--GIKLHELAQNKGFIRY 632

Query: 371  KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG-CAYHGSYEEALKYFSDMR 429
              V NAL++MYAK  ++D A  VF  M +KDV+SW+S+I G C  H S++ AL YF  M 
Sbjct: 633  VVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFD-ALYYFRYM- 690

Query: 430  ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
            +  + P+ V   + LSACA    L  G+++HA  L+ G  S   V N+L+ +Y KCG  +
Sbjct: 691  LGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTS 750

Query: 490  DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
             A   F     +DV++W  ++ G   +G G  AL  ++QM+  G  PD +TFV L+ ACS
Sbjct: 751  YAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFV-LMCACS 809

Query: 550  HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
             AG+       F    + + I P   HYACM+DLL R GKL EA  L+++M  +PDA VW
Sbjct: 810  RAGMVIQGWELFHRRTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVW 869

Query: 610  KALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
             ALL+ CR+H  +ELGE AA  + ELEP +   +V L ++Y+ AGKW   ARVRK M+ +
Sbjct: 870  GALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREK 929

Query: 670  GIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNV 729
            G+ ++ GCSWVE     H F+++D  HP   +I   +  I   +K  G+ P  +     V
Sbjct: 930  GLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAPVESLEDKEV 989

Query: 730  EEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIIL 789
             E+    G   HSE+LAVAFGL+    G  I + KN   C  CH   K IS +  R I +
Sbjct: 990  SEDDILCG---HSERLAVAFGLINTTPGTTISVTKNRYTCQSCHVIFKAISEIVRREITV 1046

Query: 790  RDSNRFHHFKAGNCSCGD 807
            RD+ + H FK G+CSCGD
Sbjct: 1047 RDTKQLHCFKDGDCSCGD 1064



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 151/464 (32%), Positives = 235/464 (50%), Gaps = 10/464 (2%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N M++     G +  A ++F + P ++ F+W+ ++ GY   G   EA +L+++M   G R
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR 194

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  YT   VLR C      + G + H + ++  F     V+  LV MYAKC  I  A  +
Sbjct: 195 PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKV 254

Query: 191 FKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
           F    DG    + ++W  MI G+ +N      +E F  M    V+ N  T  S+  A   
Sbjct: 255 F----DGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGM 310

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           +S   F  ++HG  +  GF  +V   ++LI MY   G +  A ++    E  + +SW +M
Sbjct: 311 LSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAM 370

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I G+ + GF  +AL ++  M   ++  DD T  S L   A    L+    +H L    GF
Sbjct: 371 ISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGF 430

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG-CAYHGSYEEALKYFS 426
             Y  V NAL++MYAK  ++D A  VF  M +KDV+SW+S+I G C  H S+ +AL YF 
Sbjct: 431 IRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSF-DALYYFR 489

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
            M +  + P+ V   + LSACA    L  G+++HA  L+ G  S   V N+L+ +Y KCG
Sbjct: 490 YM-LGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCG 548

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
             + A   F     +DV++W  ++ G   +G G  AL  ++QM+
Sbjct: 549 QTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMM 592



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 126/476 (26%), Positives = 223/476 (46%), Gaps = 39/476 (8%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  L  ++ S  ID+A ++F+ M+++D  +W++MIA +            FN   F   +
Sbjct: 438 NALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFC-----------FNHRSFDALY 486

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
                                +++  L   +P+  T    L  C+  G L+ G++ H Y 
Sbjct: 487 ---------------------YFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYV 525

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           ++       +V   L+D+Y KC     A   F +  + K+ V+W  M++G+  +G G  A
Sbjct: 526 LRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSE-KDVVSWNIMLSGFVAHGLGDIA 584

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           +  F  M    +   +    S L ACA +   D G ++H    + GF   V V +AL++M
Sbjct: 585 LSLFNQMMYTSL--GRMGACSALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEM 642

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           YAK   +D A  + ++    + VSW+SMI GF       +AL  F+ M    +K +  T+
Sbjct: 643 YAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLGH-VKPNSVTF 701

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
            + L+  A+   L + K +H+ +++ G     +V NAL+D+Y K G    A+  F++  +
Sbjct: 702 IAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSE 761

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           KDV+SW  +++G   HG  + AL  F+ M   G  PD V    ++ AC+   ++  G ++
Sbjct: 762 KDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTF-VLMCACSRAGMVIQGWEL 820

Query: 460 -HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
            H    K     +L     +V + ++ G + +A  + + M  + D   W AL+ GC
Sbjct: 821 FHRRTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGC 876



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 142/268 (52%)

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
           +A++ M  + G++  A R+       +  SWN M+ G+ + GF +EAL L+ +M    ++
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR 194

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
            D +T+P VL       D    + VH+ +++ GF     V NAL+ MYAK G++  A  V
Sbjct: 195 PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKV 254

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           F+ M   D ISW ++I G   +   E  L+ F  M  + + P+ + ++S+  A   L+ +
Sbjct: 255 FDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEV 314

Query: 454 EFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC 513
            F +++H   +K G    ++  NSL+ +Y   G + DA ++F  M T+D ++WTA+I G 
Sbjct: 315 GFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGY 374

Query: 514 AQNGKGKEALQFYDQMLARGTKPDYITF 541
            +NG   +AL+ Y  M      PD +T 
Sbjct: 375 EKNGFPDKALEVYALMELHNVNPDDVTI 402



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 124/253 (49%), Gaps = 12/253 (4%)

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           + NA++ M  + G +  A+ VF  M ++DV SW  ++ G    G  EEAL  +  M  +G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
           + PD      +L  C  +     G++VHA  L+ G    + V N+LV +YAKCG I  A 
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC---S 549
           +VFD M   D I+W A+I G  +N + +  L+ +  ML    +P+ +T   +  A    S
Sbjct: 253 KVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLS 312

Query: 550 HAGLAENARWYFESMDKVYGIKPGPDHYAC--MIDLLGRSGKLIEAKALLDQMVGEPDAT 607
             G A+    +  ++ + + I    D   C  +I +    G++ +A  +  +M  + DA 
Sbjct: 313 EVGFAKEMHGF--AVKRGFAI----DVAFCNSLIQMYTSLGRMGDAGKIFSRMETK-DAM 365

Query: 608 VWKALLSACRVHG 620
            W A++S    +G
Sbjct: 366 SWTAMISGYEKNG 378



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 9/203 (4%)

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
           HG   +AL        S   PD     ++   C     ++ G +  A          L +
Sbjct: 77  HGQLAQALWLLES---SPEPPDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRL 133

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
            N+++ +  + G I  A RVF  M  RDV +W  ++ G  + G  +EAL  Y +ML  G 
Sbjct: 134 GNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGM 193

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKV--YGIKPGPDHYACMIDLLGRSGKLIE 592
           +PD  TF  +L  C   G   + R   E    V  +G     D    ++ +  + G ++ 
Sbjct: 194 RPDVYTFPCVLRTC---GGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVA 250

Query: 593 AKALLDQMVGEPDATVWKALLSA 615
           A+ + D M    D   W A+++ 
Sbjct: 251 ARKVFDGM-AMTDCISWNAMIAG 272


>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 627

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 240/623 (38%), Positives = 374/623 (60%), Gaps = 6/623 (0%)

Query: 190 LFKMFPDGKNHVAWT-TMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
           + + F    N V  T   I+    NG   +  E   +M + G E     + ++L AC   
Sbjct: 8   IHRSFSSSPNSVLQTFRPISQLCSNG---RLQEALLEMVMLGPEIGFHCYDALLNACLDK 64

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
            A   G +VH  ++ + +    Y+++ L+  Y KC  L+ AR++L+     N VSW +MI
Sbjct: 65  RALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMI 124

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
             +++ G   EALS+F +M   D K ++FT+ +VL        L   K +H LIVK  ++
Sbjct: 125 SRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYD 184

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
            + FV ++L+DMYAK G ++ A  +F  + ++DV+S T++I G A  G  EEAL+ F  +
Sbjct: 185 SHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRL 244

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
           +  G+ P++V  +S+L+A + L +L+ G+Q H   L+        + NSL+ +Y+KCG +
Sbjct: 245 QSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNL 304

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML-ARGTKPDYITFVGLLFA 547
           + A R+FD+M  R  I+W A+++G +++G G+E L+ +  M   +  KPD +T + +L  
Sbjct: 305 SYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSG 364

Query: 548 CSHAGLAENARWYFESM-DKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           CSH  + +     ++ M    YGIKP  +HY C++D+LGR+G++ EA   + +M  +P A
Sbjct: 365 CSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTA 424

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
            V  +LL ACRVH  +++GE   + L E+EP NA  YV LSN+Y++AG+WED   VR +M
Sbjct: 425 GVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYASAGRWEDVNNVRAMM 484

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFAL 726
             + + KEPG SW++    +H F + DR HP R ++ +K+ EI + +K+AGYVPD++  L
Sbjct: 485 MQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDISCVL 544

Query: 727 HNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRH 786
           ++V+EE KE  L  HSEKLA+ FGL+T  +G PIR+FKNLR+C DCH   K  S V+ R 
Sbjct: 545 YDVDEEQKEKMLLGHSEKLALTFGLITTGEGIPIRVFKNLRICVDCHNFAKIFSKVFERE 604

Query: 787 IILRDSNRFHHFKAGNCSCGDYW 809
           + LRD NRFH    G CSCGDYW
Sbjct: 605 VSLRDKNRFHQIVKGICSCGDYW 627



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 199/367 (54%), Gaps = 6/367 (1%)

Query: 83  LREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRL 142
           +R   + F+ +P     T+  +    SN  L     E   +M + G     +  D +L  
Sbjct: 5   MRLIHRSFSSSPNSVLQTFRPISQLCSNGRLQ----EALLEMVMLGPEIGFHCYDALLNA 60

Query: 143 CSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVA 202
           C  K  L+ G++ H + IKT +    ++ T L+  Y KC C+ +A  +    P+ KN V+
Sbjct: 61  CLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPE-KNVVS 119

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
           WT MI+ YSQ G+  +A+  F +M     + N+FTF ++LT+C   S    G Q+HG I+
Sbjct: 120 WTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIV 179

Query: 263 SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
              ++++++V S+L+DMYAK G ++ AR + E     + VS  ++I G+A+ G  +EAL 
Sbjct: 180 KWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALE 239

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYA 382
           +F+++ +  ++ +  TY S+L   +    L++ K  H  +++     Y  + N+LIDMY+
Sbjct: 240 MFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYS 299

Query: 383 KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG-ICPDHVVVS 441
           K GNL  A  +F+ M ++  ISW +++ G + HG   E L+ F  MR    + PD V + 
Sbjct: 300 KCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLL 359

Query: 442 SILSACA 448
           ++LS C+
Sbjct: 360 AVLSGCS 366



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 194/373 (52%), Gaps = 7/373 (1%)

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
           Y     L +A+K+ +E P KN  +W+++I  YS  G   EA  +F +M     +P+++T 
Sbjct: 96  YGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTF 155

Query: 137 DNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD 196
             VL  C     L  G+Q HG  +K  +D + FV + L+DMYAK   I EA  +F+  P+
Sbjct: 156 ATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPE 215

Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
            ++ V+ T +I GY+Q G   +A+E F+ ++ EG+  N  T+ S+LTA + ++  D G Q
Sbjct: 216 -RDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQ 274

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
            H  +L         +Q++LIDMY+KCG+L  A+RL +       +SWN+M+VG+++ G 
Sbjct: 275 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGL 334

Query: 317 HKEALSLFKKMH-ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV--KTGFEGYKFV 373
            +E L LF+ M   + +K D  T  +VL+  +     +   S++  +V  + G +     
Sbjct: 335 GREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEH 394

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEALKYFSDMRISG 432
              ++DM  + G +D AF     M  K       SL+  C  H S +  +  +   R+  
Sbjct: 395 YGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVD--IGEYVGHRLIE 452

Query: 433 ICPDHVVVSSILS 445
           I P++     ILS
Sbjct: 453 IEPENAGNYVILS 465



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 126/229 (55%), Gaps = 4/229 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D   F  ++++  YA +G++ EA+++F   P ++  + +++I GY+  GLD EA E+F +
Sbjct: 184 DSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQR 243

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           +Q EG RP+  T  ++L   S   LL  G+Q H + ++      A +   L+DMY+KC  
Sbjct: 244 LQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGN 303

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSIL 242
           +  A+ LF   P+ +  ++W  M+ GYS++G G + +E FR MR E  V+ +  T  ++L
Sbjct: 304 LSYAQRLFDNMPE-RTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVL 362

Query: 243 TACAAVSARDFGAQVHGCILSS--GFEANVYVQSALIDMYAKCGDLDSA 289
           + C+     D G  ++  +++   G + +      ++DM  + G +D A
Sbjct: 363 SGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEA 411



 Score = 43.1 bits (100), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 114/325 (35%), Gaps = 78/325 (24%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           L  +L+D +S  G +  A +LF+ M +R   +WN M+  Y                    
Sbjct: 290 LQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGY-------------------- 329

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
                      S +GL  E  ELF  M+ E   +P   TL  VL  CS           H
Sbjct: 330 -----------SKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCS-----------H 367

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
           G    T   +   +V G              EY  K  PD +++     M+    +    
Sbjct: 368 GKMEDTGLSIYDGMVAG--------------EYGIK--PDTEHYGCIVDMLGRAGRIDEA 411

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV-HGCILSSGFEANVYVQSA 275
           F+ I+        GV        S+L AC    + D G  V H  I      A  YV   
Sbjct: 412 FEFIKRMPSKPTAGV------LGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYV--I 463

Query: 276 LIDMYAKCG---DLDSARRLLEYSEIDNEV--SW----NSMIVGFARQGFHKEALSLFKK 326
           L ++YA  G   D+++ R ++    +  E   SW     ++    A    H     +  K
Sbjct: 464 LSNLYASAGRWEDVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAK 523

Query: 327 MHARDIKIDDFTYPSVLNCFASNID 351
           M    IK+    Y   ++C   ++D
Sbjct: 524 MKEISIKMKQAGYVPDISCVLYDVD 548


>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Glycine max]
          Length = 676

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 246/662 (37%), Positives = 392/662 (59%), Gaps = 17/662 (2%)

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGY 215
           H   IK+ F   +F+   L+D Y KC  + EA  LF   P  ++ V W +MI+ +  +G 
Sbjct: 24  HTNVIKSGFSY-SFLGHKLIDGYIKCGSLAEARKLFDELPS-RHIVTWNSMISSHISHGK 81

Query: 216 GFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEA-NVYVQS 274
             +A+E + +M +EGV  + +TF +I  A + +     G + HG  +  G E  + +V S
Sbjct: 82  SKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVAS 141

Query: 275 ALIDMYAKCGDLDSA----RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
           AL+DMYAK   +  A    RR+LE     + V + ++IVG+A+ G   EAL +F+ M  R
Sbjct: 142 ALVDMYAKFDKMRDAHLVFRRVLE----KDVVLFTALIVGYAQHGLDGEALKIFEDMVNR 197

Query: 331 DIKIDDFTYPSVL-NCFASNI-DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD 388
            +K +++T   +L NC   N+ DL N + +H L+VK+G E       +L+ MY++   ++
Sbjct: 198 GVKPNEYTLACILINC--GNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIE 255

Query: 389 CAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
            +  VFN +   + ++WTS + G   +G  E A+  F +M    I P+   +SSIL AC+
Sbjct: 256 DSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACS 315

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
            L +LE G+Q+HA+ +K G   +     +L+ +Y KCG ++ A  VFD +   DV+   +
Sbjct: 316 SLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINS 375

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
           +I   AQNG G EAL+ ++++   G  P+ +TF+ +L AC++AGL E     F S+   +
Sbjct: 376 MIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFASIRNNH 435

Query: 569 GIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
            I+   DH+ CMIDLLGRS +L EA  L+++ V  PD  +W+ LL++C++HG++E+ E+ 
Sbjct: 436 NIELTIDHFTCMIDLLGRSRRLEEAAMLIEE-VRNPDVVLWRTLLNSCKIHGEVEMAEKV 494

Query: 629 ANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHI 688
            + + EL P +   ++ L+N+Y++AGKW     ++  ++   ++K P  SWV+ + +VH 
Sbjct: 495 MSKILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRDLKLKKSPAMSWVDVDREVHT 554

Query: 689 FISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVA 748
           F++ D  HP   +I+  +  +M  +K  GY P+  F L +++EE K   L YHSEKLA+A
Sbjct: 555 FMAGDLSHPRSLEIFEMLHGLMKKVKTLGYNPNTRFVLQDLDEEKKISSLYYHSEKLAIA 614

Query: 749 FGLL-TLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGD 807
           + L  T+ +   IRIFKNLRVCGDCH+ +K++S +  R II RDS RFHHFK G CSC D
Sbjct: 615 YALWKTIGRTTTIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDSKRFHHFKGGLCSCKD 674

Query: 808 YW 809
           YW
Sbjct: 675 YW 676



 Score =  251 bits (642), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 144/473 (30%), Positives = 263/473 (55%), Gaps = 9/473 (1%)

Query: 65  RDGFTW----NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFEL 120
           + GF++    + +I  Y   G L EA+KLF+E P ++  TW+S+I  + ++G   EA E 
Sbjct: 29  KSGFSYSFLGHKLIDGYIKCGSLAEARKLFDELPSRHIVTWNSMISSHISHGKSKEAVEF 88

Query: 121 FWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD-LNAFVVTGLVDMYA 179
           +  M +EG  P  YT   + +  S  GL++ G++ HG A+    + L+ FV + LVDMYA
Sbjct: 89  YGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVASALVDMYA 148

Query: 180 KCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFP 239
           K   + +A  +F+   + K+ V +T +I GY+Q+G   +A++ F DM   GV+ N++T  
Sbjct: 149 KFDKMRDAHLVFRRVLE-KDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKPNEYTLA 207

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
            IL  C  +     G  +HG ++ SG E+ V  Q++L+ MY++C  ++ + ++    +  
Sbjct: 208 CILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYA 267

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           N+V+W S +VG  + G  + A+S+F++M    I  + FT  S+L   +S   L   + +H
Sbjct: 268 NQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQIH 327

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
           ++ +K G +G K+   ALI++Y K GN+D A  VF+++ + DV++  S+I   A +G   
Sbjct: 328 AITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGH 387

Query: 420 EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN--S 477
           EAL+ F  ++  G+ P+ V   SIL AC    ++E G Q+ A  +++     L++D+   
Sbjct: 388 EALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFAS-IRNNHNIELTIDHFTC 446

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
           ++ +  +   + +A  + + +   DV+ W  L+  C  +G+ + A +   ++L
Sbjct: 447 MIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLLNSCKIHGEVEMAEKVMSKIL 499



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 219/431 (50%), Gaps = 32/431 (7%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           DGF  + ++  YA   ++R+A  +F     K+   +++LI GY+ +GLD EA ++F  M 
Sbjct: 136 DGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMV 195

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G +P++YTL  +L  C   G L  G+  HG  +K+  +      T L+ MY++C  I 
Sbjct: 196 NRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIE 255

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           ++  +F    D  N V WT+ + G  QNG    A+  FR+M    +  N FT  SIL AC
Sbjct: 256 DSIKVFNQL-DYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQAC 314

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           ++++  + G Q+H   +  G + N Y  +ALI++Y KCG++D AR + +     + V+ N
Sbjct: 315 SSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAIN 374

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           SMI  +A+ GF  EAL LF+++    +  +  T+ S+L      +  NNA      +V+ 
Sbjct: 375 SMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISIL------LACNNAG-----LVEE 423

Query: 366 GFEGYKFVNN------------ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
           G + +  + N             +ID+  +   L+ A M+   +++ DV+ W +L+  C 
Sbjct: 424 GCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLLNSCK 483

Query: 414 YHGSYEEALKYFSDMRISGICP----DHVVVSSILSACAELT-VLEFGQQVHAVFL-KSG 467
            HG  E A K  S  +I  + P     H++++++ ++  +   V+E    +  + L KS 
Sbjct: 484 IHGEVEMAEKVMS--KILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRDLKLKKSP 541

Query: 468 GCSSLSVDNSL 478
             S + VD  +
Sbjct: 542 AMSWVDVDREV 552



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 127/218 (58%), Gaps = 8/218 (3%)

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
           Y S++   A    L   ++VH+ ++K+GF  Y F+ + LID Y K G+L  A  +F+ + 
Sbjct: 4   YSSLIAQSAHTKSLTTLRAVHTNVIKSGFS-YSFLGHKLIDGYIKCGSLAEARKLFDELP 62

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
            + +++W S+I+    HG  +EA++++ +M + G+ PD    S+I  A ++L ++  GQ+
Sbjct: 63  SRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQR 122

Query: 459 VH--AVFLKSGGCSSLS--VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCA 514
            H  AV L   G   L   V ++LV +YAK   + DA+ VF  +  +DV+ +TALI+G A
Sbjct: 123 AHGLAVVL---GLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYA 179

Query: 515 QNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
           Q+G   EAL+ ++ M+ RG KP+  T   +L  C + G
Sbjct: 180 QHGLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLG 217



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 69/339 (20%), Positives = 142/339 (41%), Gaps = 42/339 (12%)

Query: 32  SVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWN-----TMIAAYANSGRLREA 86
           S+ P      +++   +S  + E G+    ++ + G   N      +I  Y   G + +A
Sbjct: 299 SISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKA 358

Query: 87  KKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLK 146
           + +F+     +    +S+IY Y+  G   EA ELF +++  G  P+  T  ++L  C+  
Sbjct: 359 RSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNA 418

Query: 147 GLLQRGEQFHGYAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWT 204
           GL++ G Q    +I+   ++   +   T ++D+  + + + EA  L +   +  + V W 
Sbjct: 419 GLVEEGCQIFA-SIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVRN-PDVVLWR 476

Query: 205 TMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS 264
           T++     +G             VE  E        +++    ++  D G      IL +
Sbjct: 477 TLLNSCKIHG------------EVEMAE-------KVMSKILELAPGDGGTH----ILLT 513

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARR-LLEYSEIDNEVSWNSMIVGFARQGFHKEALSL 323
              A+    + +I+M +   DL   +   + + ++D EV  ++ + G      H  +L +
Sbjct: 514 NLYASAGKWNQVIEMKSTIRDLKLKKSPAMSWVDVDREV--HTFMAGDLS---HPRSLEI 568

Query: 324 FKKMHARDIKIDDFTY-PSVLNCFASNIDLNNAKSVHSL 361
           F+ +H    K+    Y P+         DL+  K + SL
Sbjct: 569 FEMLHGLMKKVKTLGYNPNTRFVLQ---DLDEEKKISSL 604


>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 232/560 (41%), Positives = 341/560 (60%), Gaps = 9/560 (1%)

Query: 256 QVHGCILSSGFEA-----NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
           Q+H   +  G        N ++  AL+ + A    +  A ++    +  N  +WN+MI G
Sbjct: 53  QIHAFSIRHGVPPQNPDFNKHLIFALVSLSAP---MSFAAQIFNQIQAPNIFTWNTMIRG 109

Query: 311 FARQGFHKEALSLFKKMHA-RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           FA       A+ LF +MHA   I  D  T+P +    A  +D++  + +HS++V+ GF+ 
Sbjct: 110 FAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDS 169

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
            +FV N+L+ MY+  G+L  A+ VF +M  +D ++W S+I G A +G   EAL  + +M 
Sbjct: 170 LRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMG 229

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
             G+ PD   + S+LSAC EL  L  G++VH   +K G   +    N+L+ +Y+KCG   
Sbjct: 230 SEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFR 289

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
           DA +VFD M  R V++WT+LI+G A NG G EAL+ + ++  +G KP  ITFVG+L+ACS
Sbjct: 290 DAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACS 349

Query: 550 HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
           H G+ +    YF  M + YGI P  +H+ CM+DLL R+GK+ +A   +  M   P+A +W
Sbjct: 350 HCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIW 409

Query: 610 KALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
           + LL AC +HG LELGE A   +  LE  ++  +V LSN+Y++  +W D   VRK+M  +
Sbjct: 410 RTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMK 469

Query: 670 GIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNV 729
           G++K PG S VE  ++V+ FI  DR HP   + Y+ + +I  L+K  GYVP     L ++
Sbjct: 470 GVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLADI 529

Query: 730 EEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIIL 789
           EEE KE  L++H+EK+A+AF L+  P G PIRI KNLRVC DCH A+K IS V+ R II+
Sbjct: 530 EEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFEREIIV 589

Query: 790 RDSNRFHHFKAGNCSCGDYW 809
           RD +RFHHFK G+CSC DYW
Sbjct: 590 RDRSRFHHFKDGSCSCKDYW 609



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 193/393 (49%), Gaps = 13/393 (3%)

Query: 134 YTLDNVLRLCSLKGLLQ-RGEQFHGYAIKTCF-----DLNAFVVTGLVDMYAKCKCIFEA 187
           + L   + L  L G  Q + +Q H ++I+        D N  ++  LV + A     F A
Sbjct: 32  FILRKCISLVQLCGSSQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMS--FAA 89

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV-EGVESNQFTFPSILTACA 246
           +   ++     N   W TMI G++++     A+E F  M     +  +  TFP +  A A
Sbjct: 90  QIFNQI--QAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVA 147

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            +     G  +H  ++ +GF++  +VQ++L+ MY+  G L SA ++ E     + V+WNS
Sbjct: 148 KLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNS 207

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           +I GFA  G   EAL+L+++M +  ++ D FT  S+L+       L   + VH  +VK G
Sbjct: 208 VINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVG 267

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
               +  +NAL+D+Y+K GN   A  VF+ M+++ V+SWTSLI G A +G   EALK F 
Sbjct: 268 LVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFG 327

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFG-QQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
           ++   G+ P  +    +L AC+   +L+ G      +  + G    +     +V +  + 
Sbjct: 328 ELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRA 387

Query: 486 GCINDANRVFDSMHT-RDVITWTALIMGCAQNG 517
           G + DA     +M    + + W  L+  C  +G
Sbjct: 388 GKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHG 420



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 177/361 (49%), Gaps = 16/361 (4%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ-L 126
           F  + + A  + S  +  A ++FN+    N FTW+++I G++       A ELF QM   
Sbjct: 70  FNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAA 129

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
               P  +T   + +  +    +  GE  H   ++  FD   FV   LV MY+    +  
Sbjct: 130 SSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXS 189

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A  +F++    ++ VAW ++I G++ NG   +A+  +R+M  EGVE + FT  S+L+AC 
Sbjct: 190 AYQVFEIM-SYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACV 248

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            + A   G +VH  ++  G   N +  +AL+D+Y+KCG+   A+++ +  E  + VSW S
Sbjct: 249 ELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTS 308

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL----NCFASNIDLN---NAKSVH 359
           +IVG A  G   EAL LF ++  + +K  + T+  VL    +C   +   N     K  +
Sbjct: 309 LIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEY 368

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSY 418
            ++ +    G       ++D+  + G +  A+  + N+    + + W +L+  C  HG  
Sbjct: 369 GILPRIEHHG------CMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHL 422

Query: 419 E 419
           E
Sbjct: 423 E 423



 Score = 45.8 bits (107), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 72/176 (40%), Gaps = 33/176 (18%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           AL+D +S  G   +A ++F++M +R   +W ++I   A +G   EA KLF E        
Sbjct: 277 ALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGE-------- 328

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
                                  ++ +G +PS+ T   VL  CS  G+L  G  +     
Sbjct: 329 -----------------------LERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMK 365

Query: 161 KTCFDLNAFVVTG-LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGY 215
           +    L      G +VD+  +   + +A    +  P   N V W T++   + +G+
Sbjct: 366 EEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGH 421


>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
          Length = 772

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 265/655 (40%), Positives = 394/655 (60%), Gaps = 8/655 (1%)

Query: 149 LQRGEQFHGYAIKT-CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
           L++G + HG+ I T   D    +  GLV+MYAKC  I +A  +F  F   K+ V+W +MI
Sbjct: 49  LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVF-CFMMEKDSVSWNSMI 107

Query: 208 TGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFE 267
           TG  QNG   +A+E ++ MR   +    FT  S L++CA++     G Q+HG  L  G +
Sbjct: 108 TGLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGID 167

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR-QGFHKEALSLFKK 326
            NV V +AL+ +YA+ G L+  R++       ++VSWNS+I   A  +    EA++ F  
Sbjct: 168 LNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLN 227

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
                 K++  T+ SVL+  +S       K +H L +K          NALI  Y K G 
Sbjct: 228 ALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGE 287

Query: 387 LDCAFMVFNLMQDK-DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
           +D    +F+ M ++ D ++W S+I+G  ++    +AL     M  +G   D  + +++LS
Sbjct: 288 MDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLS 347

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
           A A +  LE G +VHA  +++   S + V ++LV +Y+KCG ++ A R F++M  R+  +
Sbjct: 348 AFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYS 407

Query: 506 WTALIMGCAQNGKGKEALQFYDQMLARG-TKPDYITFVGLLFACSHAGLAENARWYFESM 564
           W ++I G A++G+G+EAL+ +  M   G T PD++TFVG+L ACSHAGL E    +FESM
Sbjct: 408 WNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESM 467

Query: 565 DKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSAC-RVHG-DL 622
              YG+ P  +H++CM DLLGR+G+L + +  +D+M  +P+  +W+ +L AC R +G   
Sbjct: 468 SDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKA 527

Query: 623 ELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVET 682
           ELG++AA  LF+LEP NA+ YV L NMY+  G+WED  + RK MK   ++KE G SWV  
Sbjct: 528 ELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTM 587

Query: 683 NSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHS 742
              VH+F++ D+ HP    IY K+ E+   +++AGYVP   FAL+++E+E KE  L+YHS
Sbjct: 588 KDGVHMFVAGDKSHPDTDVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHS 647

Query: 743 EKLAVAFGLLTLPQGA-PIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFH 796
           EKLAVAF L        PIRI KNLRVCGDCH+A KYIS +  R IILRDSNR+ 
Sbjct: 648 EKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRYE 702



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 145/480 (30%), Positives = 243/480 (50%), Gaps = 7/480 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++  YA  G + +A+++F     K+  +W+S+I G    G  IEA E +  M+     
Sbjct: 73  NGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRHEIL 132

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  +TL + L  C+     + G+Q HG ++K   DLN  V   L+ +YA+   + E   +
Sbjct: 133 PGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKI 192

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGF-KAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           F   P+  + V+W ++I   + +     +A+ CF +    G + N+ TF S+L+A +++S
Sbjct: 193 FSSMPE-HDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLS 251

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL-EYSEIDNEVSWNSMI 308
             + G Q+HG  L          ++ALI  Y KCG++D   ++    SE  ++V+WNSMI
Sbjct: 252 FGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMI 311

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
            G+       +AL L   M     ++D F Y +VL+ FAS   L     VH+  V+   E
Sbjct: 312 SGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLE 371

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
               V +AL+DMY+K G LD A   FN M  ++  SW S+I+G A HG  EEALK F++M
Sbjct: 372 SDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANM 431

Query: 429 RISG-ICPDHVVVSSILSACAELTVLEFG-QQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
           ++ G   PDHV    +LSAC+   +LE G +   ++    G    +   + +  +  + G
Sbjct: 432 KLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAG 491

Query: 487 CINDANRVFDSMHTR-DVITWTALIMGCAQ-NGKGKEALQFYDQMLARGTKPDYITFVGL 544
            ++      D M  + +V+ W  ++  C + NG+  E  +   +ML +    + + +V L
Sbjct: 492 ELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLL 551



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 128/260 (49%), Gaps = 5/260 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNE-TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           +  T N +IA Y   G +   +K+F+  +  ++  TW+S+I GY +  L  +A +L W M
Sbjct: 271 EATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFM 330

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
              G R   +    VL   +    L+RG + H  +++ C + +  V + LVDMY+KC  +
Sbjct: 331 LQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRL 390

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILT 243
             A   F   P  +N  +W +MI+GY+++G G +A++ F +M+++G    +  TF  +L+
Sbjct: 391 DYALRFFNTMPV-RNSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLS 449

Query: 244 ACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NE 301
           AC+     + G +    +  S G    +   S + D+  + G+LD     ++   +  N 
Sbjct: 450 ACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNV 509

Query: 302 VSWNSMIVGFARQGFHKEAL 321
           + W +++    R    K  L
Sbjct: 510 LIWRTVLGACCRANGRKAEL 529



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 4/147 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           + D    + ++  Y+  GRL  A + FN  P +N ++W+S+I GY+ +G   EA +LF  
Sbjct: 371 ESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFAN 430

Query: 124 MQLEGYRPSQY-TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV--VTGLVDMYAK 180
           M+L+G  P  + T   VL  CS  GLL+ G + H  ++   + L   +   + + D+  +
Sbjct: 431 MKLDGQTPPDHVTFVGVLSACSHAGLLEEGFK-HFESMSDSYGLAPRIEHFSCMADLLGR 489

Query: 181 CKCIFEAEYLFKMFPDGKNHVAWTTMI 207
              + + E      P   N + W T++
Sbjct: 490 AGELDKLEDFIDKMPVKPNVLIWRTVL 516


>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
 gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
          Length = 793

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 269/781 (34%), Positives = 398/781 (50%), Gaps = 100/781 (12%)

Query: 129 YRPSQYTLDNVLRLCSLKGLLQRGE------QFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           ++   +TL   L L  L+  LQ+ +      Q     I + F  ++F  + L+    +  
Sbjct: 13  FKIPTFTLKPTLTLPILETHLQKCQNIKQFNQILSQMILSGFFKDSFAASRLLKFSTELP 72

Query: 183 CI-FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
            I     Y      +  N     TM+ GY Q     KAI  ++ M    V ++ +T+P +
Sbjct: 73  FININQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPIL 132

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
             +C+   A   G  +   +L  GF+++VY+Q+ LI+MYA CG+L  AR++ + S + + 
Sbjct: 133 FQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDM 192

Query: 302 VSWNSM-------------------------------IVGFARQG--------------- 315
           VSWNSM                               IV F ++G               
Sbjct: 193 VSWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQK 252

Query: 316 ----------------FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
                            ++EAL LFK+M+A  I +D+    SVL+  +  + +   K VH
Sbjct: 253 DLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVH 312

Query: 360 SLIVKTGFEGYKFVNNALIDMYA-------------------------------KQGNLD 388
            L+VK G E Y  + NALI MY+                               K G ++
Sbjct: 313 GLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIE 372

Query: 389 CAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
            A  +F+ M DKD +SW+++I+G A    + E L  F +M+I G  PD  ++ S++SAC 
Sbjct: 373 KARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACT 432

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
            L  L+ G+ +HA   K+G   ++ +  +L+ +Y K GC+ DA  VF  +  + V TW A
Sbjct: 433 HLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNA 492

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
           LI+G A NG   ++L+ + +M   G  P+ ITFV +L AC H GL +    +F SM + +
Sbjct: 493 LILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEH 552

Query: 569 GIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
            I P   HY CM+DLLGR+G L EA+ L++ M   PD + W ALL AC+ +GD E GER 
Sbjct: 553 KIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERI 612

Query: 629 ANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHI 688
              L EL P +    V LSN+Y++ G W D   VR +M+  G+ K PGCS +E + +VH 
Sbjct: 613 GRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAHGRVHE 672

Query: 689 FISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVA 748
           F++ D+ HP    I   +DE+   +K  GY PD      +++EE KE  L  HSEKLA+A
Sbjct: 673 FLAGDKTHPQNEHIEHMLDEMAKKLKLEGYAPDTREVSLDIDEEEKETTLFRHSEKLAIA 732

Query: 749 FGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDY 808
           FGL+ +    PIRI KNLR+C DCHTA K IS  + R I++RD +RFHHFK G+CSC DY
Sbjct: 733 FGLIAIDPPTPIRIVKNLRICNDCHTAAKLISKAFNREIVVRDRHRFHHFKQGSCSCMDY 792

Query: 809 W 809
           W
Sbjct: 793 W 793



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 134/523 (25%), Positives = 236/523 (45%), Gaps = 91/523 (17%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D +  NT+I  YA  G L +A+K+F+ +   +  +W+S++ GY   G   EA +++ +
Sbjct: 158 DSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDR 217

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M                                        + N      ++ ++ K   
Sbjct: 218 MP---------------------------------------ERNVIASNSMIVLFGKKGN 238

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + EA  LF      K+ V+W+ +I+ Y QN    +A+  F++M   G+  ++    S+L+
Sbjct: 239 VEEACKLFNEMKQ-KDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLS 297

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYA---------------------- 281
           AC+ +     G  VHG ++  G E  V +Q+ALI MY+                      
Sbjct: 298 ACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQIS 357

Query: 282 ---------KCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI 332
                    KCG+++ AR L +     + VSW++MI G+A+Q    E L LF++M     
Sbjct: 358 WNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGT 417

Query: 333 KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM 392
           K D+    SV++       L+  K +H+ I K G +    +   LI+MY K G ++ A  
Sbjct: 418 KPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALE 477

Query: 393 VFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV 452
           VF  +++K V +W +LI G A +G  +++LK FS+M+  G+ P+ +   ++L AC  + +
Sbjct: 478 VFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGL 537

Query: 453 LEFGQ-------QVHAV--FLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM-HTRD 502
           ++ G        Q H +   +K  GC        +V +  + G + +A  + +SM    D
Sbjct: 538 VDEGHRHFNSMIQEHKIGPNIKHYGC--------MVDLLGRAGMLKEAEELIESMPMAPD 589

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           V TW AL+  C + G  +   +   +++     PD+  F  LL
Sbjct: 590 VSTWGALLGACKKYGDNETGERIGRKLVE--LHPDHDGFNVLL 630



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 122/482 (25%), Positives = 226/482 (46%), Gaps = 42/482 (8%)

Query: 30  GNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKL 89
           G+SV      N  L  +   G ++EA  ++++M +R+    N+MI  +   G + EA KL
Sbjct: 186 GSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKL 245

Query: 90  FNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLL 149
           FNE   K+  +WS+LI  Y    +  EA  LF +M   G    +  + +VL  CS   ++
Sbjct: 246 FNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVV 305

Query: 150 QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC---------------------------- 181
             G+  HG  +K   +    +   L+ MY+ C                            
Sbjct: 306 ITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGY 365

Query: 182 -KC--IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTF 238
            KC  I +A  LF   PD K++V+W+ MI+GY+Q     + +  F++M++EG + ++   
Sbjct: 366 VKCGEIEKARALFDSMPD-KDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETIL 424

Query: 239 PSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI 298
            S+++AC  ++A D G  +H  I  +G + N+ + + LI+MY K G ++ A  + +  E 
Sbjct: 425 VSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEE 484

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKS 357
               +WN++I+G A  G   ++L  F +M    +  ++ T+ +VL  C    +     + 
Sbjct: 485 KGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRH 544

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNL-DCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +S+I +            ++D+  + G L +   ++ ++    DV +W +L+  C  +G
Sbjct: 545 FNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYG 604

Query: 417 SYEEALKYFSDMRISGICPDH----VVVSSILSACAE-LTVLEF-GQQVHAVFLKSGGCS 470
             E   +     ++  + PDH    V++S+I ++    + VLE  G       +K+ GCS
Sbjct: 605 DNETGERI--GRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCS 662

Query: 471 SL 472
            +
Sbjct: 663 MI 664



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 165/353 (46%), Gaps = 10/353 (2%)

Query: 38  DLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK 96
           +L  AL+  +S+  E+  A +LF +    D  +WN+MI+ Y   G + +A+ LF+  P K
Sbjct: 325 NLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDK 384

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
           +  +WS++I GY+      E   LF +MQ+EG +P +  L +V+  C+    L +G+  H
Sbjct: 385 DNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIH 444

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
            Y  K    +N  + T L++MY K  C+ +A  +FK   + K    W  +I G + NG  
Sbjct: 445 AYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEE-KGVSTWNALILGLAMNGLV 503

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ-VHGCILSSGFEANVYVQSA 275
            K+++ F +M+  GV  N+ TF ++L AC  +   D G +  +  I       N+     
Sbjct: 504 DKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGC 563

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIVGFARQGFHKEALSLFKKMHARDIKI 334
           ++D+  + G L  A  L+E   +  +VS W +++    + G ++    + +K+       
Sbjct: 564 MVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDH 623

Query: 335 DDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL 387
           D F      N   SNI  +    V  L V+     +  V      M    G +
Sbjct: 624 DGF------NVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAHGRV 670



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/295 (21%), Positives = 124/295 (42%), Gaps = 51/295 (17%)

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVH------SLIVKTGFEGYKFVNNALIDMYA 382
           ++  KI  FT    L        L   +++       S ++ +GF    F  + L+    
Sbjct: 10  SKPFKIPTFTLKPTLTLPILETHLQKCQNIKQFNQILSQMILSGFFKDSFAASRLLKFST 69

Query: 383 KQG--NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVV 440
           +    N++ ++ +F+ +++ +     +++ G     S  +A+  +  M  S +  D+   
Sbjct: 70  ELPFININQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTY 129

Query: 441 SSILSACAELTVLEF-GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH 499
             +  +C+ + + EF G+ +    LK G  S + + N+L+ +YA CG ++DA +VFD   
Sbjct: 130 PILFQSCS-IRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSS 188

Query: 500 TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW 559
             D+++W +++ G    G  +EA   YD+M  R                    +A N+  
Sbjct: 189 VLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPERNV------------------IASNS-- 228

Query: 560 YFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
                               MI L G+ G + EA  L ++M  + D   W AL+S
Sbjct: 229 --------------------MIVLFGKKGNVEEACKLFNEM-KQKDLVSWSALIS 262


>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 668

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 236/583 (40%), Positives = 366/583 (62%), Gaps = 5/583 (0%)

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           +E ++  +  +L  C  +     G  VH  +++S F  ++ ++++++ MYAKCG L+ AR
Sbjct: 87  LEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIAR 146

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEA---LSLFKKMHARDIKIDDFTYPSVLNCFA 347
           ++ +   + + V+W SMI G+++ G+   A   L LF +M    ++ ++F   S++ C  
Sbjct: 147 QVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCG 206

Query: 348 SNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTS 407
                 + K +H    K GF+   FV ++L+DMYA+ G L  + +VF+ ++ K+ +SW +
Sbjct: 207 FLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNA 266

Query: 408 LITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG 467
           LI+G A  G  EEAL  F  M+  G        S++L + +    LE G+ +HA  +KSG
Sbjct: 267 LISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSG 326

Query: 468 GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYD 527
                 V N+L+ +YAK G I DA +VFD +   DV++  ++++G AQ+G GKEA++ ++
Sbjct: 327 KKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFE 386

Query: 528 QM-LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGR 586
           +M L    +P+ ITF+ +L ACSHAGL +   +YFE M K YG++P   HY  ++DL GR
Sbjct: 387 EMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKK-YGLEPKLSHYTTVVDLFGR 445

Query: 587 SGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQL 646
           +G L +AK+ +++M  EP+AT+W ALL A ++H + E+G  AA  + EL+P     +  L
Sbjct: 446 AGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLL 505

Query: 647 SNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKI 706
           SN+Y++AG+W+D A+VRK MK  G++KEP CSWVE  + VHIF + D  HP +  +Y   
Sbjct: 506 SNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKVYEMW 565

Query: 707 DEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNL 766
           + +   IKE GYVPD +     V+++ KE+ L YHSEKLA+AF LL    G+ IRI KN+
Sbjct: 566 ENLNQKIKEIGYVPDTSHVHVFVDQQEKELNLQYHSEKLALAFALLNTKPGSVIRIMKNI 625

Query: 767 RVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           RVCGDCH+A+KY+S V  R II+RD+NRFHHF+ G+CSC DYW
Sbjct: 626 RVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFRDGSCSCRDYW 668



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/396 (32%), Positives = 217/396 (54%), Gaps = 5/396 (1%)

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
            P +   + +L+ C++ G L++G+  H + + + F  +  +   ++ MYAKC  +  A  
Sbjct: 88  EPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQ 147

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYG---FKAIECFRDMRVEGVESNQFTFPSILTACA 246
           +F      K+ V WT+MITGYSQ+GY      A+  F +M  +G+  N+F   S++  C 
Sbjct: 148 VFDEMC-VKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCG 206

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            + +   G Q+HGC    GF+ NV+V S+L+DMYA+CG+L  +R + +  E  NEVSWN+
Sbjct: 207 FLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNA 266

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           +I GFAR+G  +EAL LF KM        +FTY ++L   ++   L   K +H+ ++K+G
Sbjct: 267 LISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSG 326

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
            +   +V N L+ MYAK GN+  A  VF+ +   DV+S  S++ G A HG  +EA++ F 
Sbjct: 327 KKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFE 386

Query: 427 DMRI-SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
           +M +   I P+ +   S+L+AC+   +L+ G     +  K G    LS   ++V ++ + 
Sbjct: 387 EMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRA 446

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKE 521
           G ++ A    + M      T    ++G ++  K  E
Sbjct: 447 GLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTE 482



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/500 (26%), Positives = 246/500 (49%), Gaps = 38/500 (7%)

Query: 32  SVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDR------------------------DG 67
           S+ P S     ++D  N+G ++    ++ K+  R                        D 
Sbjct: 67  SLNPNSTTGLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDL 126

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLD---IEAFELFWQM 124
              N+++  YA  G L  A+++F+E   K+  TW+S+I GYS  G       A  LF +M
Sbjct: 127 VIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEM 186

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
             +G RP+++ L ++++ C   G    G+Q HG   K  F  N FV + LVDMYA+C  +
Sbjct: 187 VRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGEL 246

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            E+  +F    + KN V+W  +I+G+++ G G +A+  F  M+ EG  + +FT+ ++L +
Sbjct: 247 RESRLVFDEL-ESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCS 305

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
            +   + + G  +H  ++ SG +   YV + L+ MYAK G++  A+++ +     + VS 
Sbjct: 306 SSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSC 365

Query: 305 NSMIVGFARQGFHKEALSLFKKMHA-RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           NSM++G+A+ G  KEA+ LF++M    +I+ +D T+ SVL   +    L+       L+ 
Sbjct: 366 NSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMK 425

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEAL 422
           K G E        ++D++ + G LD A      M  + +   W +L+     H + E  +
Sbjct: 426 KYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTE--M 483

Query: 423 KYFSDMRISGICP----DHVVVSSILSACAELT-VLEFGQQVHAVFL-KSGGCSSLSVDN 476
             ++  ++  + P     H ++S+I ++  +   V +  +++    L K   CS + ++N
Sbjct: 484 GAYAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIEN 543

Query: 477 SLVLVYAKCGCINDANRVFD 496
           S+ +  A        N+V++
Sbjct: 544 SVHIFSANDISHPQKNKVYE 563


>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera]
          Length = 684

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 253/672 (37%), Positives = 367/672 (54%), Gaps = 73/672 (10%)

Query: 120 LFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYA 179
           L   + L    P    LD+ LR  S +G        H   + T F +  F+   L+D+Y 
Sbjct: 6   LVRDLYLPNSSPFAKLLDSCLRSRSARGT----RLVHARILMTQFSMEIFIQNRLIDVYG 61

Query: 180 KCKCIFEAEYLFKMFPDGK------------------------------NHVAWTTMITG 209
           KC C+ +A  LF   P                                 +  +W +M++G
Sbjct: 62  KCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSG 121

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
           ++Q+    +++E F  M  E    N+++F S L+ACA +   + G QVH  +  S +  +
Sbjct: 122 FAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTD 181

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA 329
           VY+ SALIDMY+KCG +  A  +       N V+WNS+I  + + G   EAL +F +M  
Sbjct: 182 VYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMD 241

Query: 330 RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG-FEGYKFVNNALIDMYAK----- 383
             ++ D+ T  SV++  AS   L     +H+ +VKT  F     + NAL+DMYAK     
Sbjct: 242 SGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVN 301

Query: 384 --------------------------QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
                                       ++  A  +F+ M  ++V+SW +LI G   +G 
Sbjct: 302 EARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGE 361

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK------SGGCSS 471
            EEAL+ F  ++   I P H    ++LSACA L  L  G+Q H   LK      SG  S 
Sbjct: 362 NEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESD 421

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
           + V NSL+ +Y KCG I D +RVF+ M  RD ++W A+I+G AQNG G EALQ + +ML 
Sbjct: 422 IFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLV 481

Query: 532 RGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLI 591
            G KPD++T +G+L ACSHAGL E  R YF SM++ +G+ P  DHY CM+DLLGR+G L 
Sbjct: 482 CGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEE-HGLIPLKDHYTCMVDLLGRAGCLN 540

Query: 592 EAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYS 651
           EAK L++ M   PDA VW +LL+AC+VHG++E+G+ AA  L E++P N+ PYV LSNMY+
Sbjct: 541 EAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYA 600

Query: 652 TAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIML 711
             G+W D  RVRKLM+ +G+ K+PGCSW+E  S+VH+F+ +D+ HP R  IYS +  +  
Sbjct: 601 ELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTE 660

Query: 712 LIKEAGYVPDMN 723
            +K  GY+PD N
Sbjct: 661 QMKRVGYIPDAN 672



 Score =  265 bits (676), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 157/527 (29%), Positives = 273/527 (51%), Gaps = 43/527 (8%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           NR +  +     +D+A +LF++M  R+ FTWN++I+    SG L EA +LF   P  +  
Sbjct: 54  NRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQC 113

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           +W+S++ G++ +    E+ E F +M  E +  ++Y+  + L  C+    L  G Q H   
Sbjct: 114 SWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALV 173

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
            K+ +  + ++ + L+DMY+KC  +  AE +F    + +N V W ++IT Y QNG   +A
Sbjct: 174 SKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIE-RNLVTWNSLITCYEQNGPASEA 232

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG-FEANVYVQSALID 278
           +E F  M   G+E ++ T  S+++ACA++ A   G Q+H  ++ +  F  ++ + +AL+D
Sbjct: 233 LEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVD 292

Query: 279 MYAKCGDLDSARRLLEYSEI-------------------------------DNEVSWNSM 307
           MYAKC  ++ ARR+ +   I                                N VSWN++
Sbjct: 293 MYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNAL 352

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I G+ + G ++EAL LF+ +    I    +T+ ++L+  A+  DL   +  H+ ++K GF
Sbjct: 353 IAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGF 412

Query: 368 EGYK------FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           E         FV N+LIDMY K G+++    VF  M+++D +SW ++I G A +G   EA
Sbjct: 413 EFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEA 472

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           L+ F  M + G  PDHV +  +L AC+   ++E G+       + G          +V +
Sbjct: 473 LQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDL 532

Query: 482 YAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGK---GKEALQ 524
             + GC+N+A  + ++M    D + W +L+  C  +G    GK A +
Sbjct: 533 LGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAE 579



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 95/202 (47%), Gaps = 16/202 (7%)

Query: 20  IGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           I P  YT   GN +   ++L   L+       + + G  F+  ++ D F  N++I  Y  
Sbjct: 377 IWPTHYT--FGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMK 434

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
            G + +  ++F +   ++  +W+++I GY+  G   EA ++F +M + G +P   T+  V
Sbjct: 435 CGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGV 494

Query: 140 LRLCSLKGLLQRGEQF------HGY-AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
           L  CS  GL++ G  +      HG   +K  +       T +VD+  +  C+ EA+ L +
Sbjct: 495 LCACSHAGLVEEGRHYFFSMEEHGLIPLKDHY-------TCMVDLLGRAGCLNEAKNLIE 547

Query: 193 MFPDGKNHVAWTTMITGYSQNG 214
             P   + V W +++     +G
Sbjct: 548 AMPVNPDAVVWGSLLAACKVHG 569


>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Vitis vinifera]
          Length = 611

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 239/602 (39%), Positives = 364/602 (60%), Gaps = 3/602 (0%)

Query: 210 YSQNGYGFKAIECFRDM--RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFE 267
           +S+ G+  ++ +  ++    V   E N   + + L  C        G  +H  IL  G  
Sbjct: 11  FSRRGFSVQSAKLTQEFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGC 70

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM 327
            +++  + L++MY K   L  A +L +     N +S+ ++I G+A      EA+ LF ++
Sbjct: 71  LDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRL 130

Query: 328 HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL 387
           H R++  + FT+ SVL   A+   LN    +H  ++K G     FV+NAL+D+YAK G +
Sbjct: 131 H-REVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRM 189

Query: 388 DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSAC 447
           + +  +F     ++ ++W ++I G    G  E+AL+ F +M    +    V  SS L AC
Sbjct: 190 ENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRAC 249

Query: 448 AELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWT 507
           A L  LE G Q+H++ +K+     + V N+L+ +YAKCG I DA  VFD M+ +D ++W 
Sbjct: 250 ASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWN 309

Query: 508 ALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKV 567
           A+I G + +G G+EAL+ +D+M     KPD +TFVG+L AC++AGL +  + YF SM + 
Sbjct: 310 AMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQD 369

Query: 568 YGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGER 627
           +GI+P  +HY CM+ LLGR G L +A  L+D++  +P   VW+ALL AC +H D+ELG  
Sbjct: 370 HGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRI 429

Query: 628 AANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVH 687
           +A  + E+EP +   +V LSNMY+TA +W++ A VRK MK +G++KEPG SW+E+   VH
Sbjct: 430 SAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVH 489

Query: 688 IFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAV 747
            F   D  HP    I   ++ + +  K+AGY+P+ N  L +VE+E KE  L  HSE+LA+
Sbjct: 490 SFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLAL 549

Query: 748 AFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGD 807
           +FG++  P G+PIRI KNLR+C DCH A+K IS V  R I++RD NRFHHF+ G CSCGD
Sbjct: 550 SFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGD 609

Query: 808 YW 809
           YW
Sbjct: 610 YW 611



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/420 (32%), Positives = 229/420 (54%), Gaps = 12/420 (2%)

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQY---TLDNVLRLCSLKGLLQRGEQFHGY 158
           ++ +  +S  G  +++ +L  Q  +    PS++      N L+ C  K    RG+  H  
Sbjct: 5   NNFLIQFSRRGFSVQSAKLT-QEFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCE 63

Query: 159 AIKT--CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
            +K   C DL A+ +  L++MY K   + +A  LF   P+ +N +++ T+I GY+++   
Sbjct: 64  ILKRGGCLDLFAWNI--LLNMYVKSDFLCDASKLFDEMPE-RNTISFVTLIQGYAESVRF 120

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
            +AIE F  +  E V  NQFTF S+L ACA +   + G Q+H  ++  G  ++V+V +AL
Sbjct: 121 LEAIELFVRLHRE-VLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNAL 179

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           +D+YAKCG ++++  L   S   N+V+WN++IVG  + G  ++AL LF  M    ++  +
Sbjct: 180 MDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATE 239

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
            TY S L   AS   L     +HSL VKT F+    V NALIDMYAK G++  A +VF+L
Sbjct: 240 VTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDL 299

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
           M  +D +SW ++I+G + HG   EAL+ F  M+ + + PD +    +LSACA   +L+ G
Sbjct: 300 MNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQG 359

Query: 457 QQVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCA 514
           Q      ++  G    +     +V +  + G ++ A ++ D +  +  V+ W AL+  C 
Sbjct: 360 QAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACV 419



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 128/384 (33%), Positives = 206/384 (53%), Gaps = 10/384 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F WN ++  Y  S  L +A KLF+E P +N  ++ +LI GY+     +EA ELF ++ 
Sbjct: 72  DLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLH 131

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            E   P+Q+T  +VL+ C+    L  G Q H + IK     + FV   L+D+YAKC  + 
Sbjct: 132 RE-VLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRME 190

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            +  LF   P  +N V W T+I G+ Q G G KA+  F +M    V++ + T+ S L AC
Sbjct: 191 NSMELFAESPH-RNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRAC 249

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A+++A + G Q+H   + + F+ ++ V +ALIDMYAKCG +  AR + +     +EVSWN
Sbjct: 250 ASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWN 309

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS-VHSLIVK 364
           +MI G++  G  +EAL +F KM   ++K D  T+  VL+  A+   L+  ++   S+I  
Sbjct: 310 AMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQD 369

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALK 423
            G E        ++ +  + G+LD A  + + +     V+ W +L+  C  H   E  L 
Sbjct: 370 HGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIE--LG 427

Query: 424 YFSDMRISGICPD----HVVVSSI 443
             S  R+  + P     HV++S++
Sbjct: 428 RISAQRVLEMEPQDKATHVLLSNM 451



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 5/107 (4%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D+D    N +I  YA  G +++A+ +F+    ++  +W+++I GYS +GL  EA  +F +
Sbjct: 271 DKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDK 330

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF-----HGYAIKTCFD 165
           MQ    +P + T   VL  C+  GLL +G+ +       + I+ C +
Sbjct: 331 MQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIE 377


>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
          Length = 761

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 280/755 (37%), Positives = 405/755 (53%), Gaps = 83/755 (10%)

Query: 89  LFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL 148
           LFN T   N F ++S++  YS+     +   +F  MQ  G RP  +    +++     G+
Sbjct: 56  LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGNGGI 115

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVA-WTTMI 207
                 FH + +K     +AFV   ++DMYA+   I  A  +F   PD +  VA W  M+
Sbjct: 116 -----GFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMV 170

Query: 208 TGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFE 267
           +GY                + E     Q+ F  +                         E
Sbjct: 171 SGY---------------WKWESEGQAQWLFDVMP------------------------E 191

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM 327
            NV   +A++  YAK  DL++ARR  +     + VSWN+M+ G+A+ G  +E L LF +M
Sbjct: 192 RNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEM 251

Query: 328 HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK---- 383
               I+ D+ T+ +V++  +S  D   A S+   + +   +   FV  AL+DMYAK    
Sbjct: 252 VNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSI 311

Query: 384 ----------------------------QGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
                                        GNLD A  +FN M  ++V++W S+I G A +
Sbjct: 312 GAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQN 371

Query: 416 GSYEEALKYFSDMRISG-ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
           G    A++ F +M  +  + PD V + S++SAC  L  LE G  V     ++    S+S 
Sbjct: 372 GQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISG 431

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
            N+++ +Y++CG + DA RVF  M TRDV+++  LI G A +G G EA+     M   G 
Sbjct: 432 HNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGI 491

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAK 594
           +PD +TF+G+L ACSHAGL E  R  FES+       P  DHYACM+DLLGR G+L +AK
Sbjct: 492 EPDRVTFIGVLTACSHAGLLEEGRKVFESIKD-----PAIDHYACMVDLLGRVGELEDAK 546

Query: 595 ALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAG 654
             +++M  EP A V+ +LL+A R+H  +ELGE AAN LFELEP N+  ++ LSN+Y++AG
Sbjct: 547 RTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAG 606

Query: 655 KWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIK 714
           +W+D  R+R+ MK  G++K  G SWVE   ++H FI  DR H    DIY  + E+   ++
Sbjct: 607 RWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMR 666

Query: 715 EAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHT 774
           EAGY+ D +  L +VEEE KE  +  HSEKLA+ + LL    GA IR+ KNLRVC DCHT
Sbjct: 667 EAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALLVSEAGAVIRVVKNLRVCWDCHT 726

Query: 775 AMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           A+K IS +  R II+RD+NRFH F  G CSC DYW
Sbjct: 727 AIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 761



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 134/509 (26%), Positives = 229/509 (44%), Gaps = 79/509 (15%)

Query: 25  YTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLR 84
           + H  G  V+P + +   L+  + +G I     + +     D F  N +I  YA  G + 
Sbjct: 88  FEHMQGCGVRPDAFVYPILIKSAGNGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIG 147

Query: 85  EAKKLFNETP--FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRL 142
            A+K+F+E P   +    W++++ GY             W+ + EG   +Q+  D     
Sbjct: 148 HARKVFDEIPDYERKVADWNAMVSGY-------------WKWESEG--QAQWLFD----- 187

Query: 143 CSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVA 202
                                 + N    T +V  YAK K +  A   F   P+ ++ V+
Sbjct: 188 -------------------VMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPE-RSVVS 227

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
           W  M++GY+QNG   + +  F +M   G+E ++ T+ ++++AC++       A +   + 
Sbjct: 228 WNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLH 287

Query: 263 SSGFEANVYVQSALIDMYAKC--------------------------------GDLDSAR 290
               + N +V++AL+DMYAKC                                G+LDSAR
Sbjct: 288 QKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSAR 347

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM-HARDIKIDDFTYPSVLNCFASN 349
            L       N V+WNSMI G+A+ G    A+ LFK+M  A+ +  D+ T  SV++     
Sbjct: 348 ELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHL 407

Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
             L     V   + +   +     +NA+I MY++ G+++ A  VF  M  +DV+S+ +LI
Sbjct: 408 GALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLI 467

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
           +G A HG   EA+   S M+  GI PD V    +L+AC+   +LE G++V     +S   
Sbjct: 468 SGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKV----FESIKD 523

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSM 498
            ++     +V +  + G + DA R  + M
Sbjct: 524 PAIDHYACMVDLLGRVGELEDAKRTMERM 552



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 185/408 (45%), Gaps = 42/408 (10%)

Query: 20  IGPARYTHNVGNSV----KPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIA 75
           +GP  +   V + +    +  +D N  +  +       +A  LF+ M +R+  TW  M+ 
Sbjct: 143 LGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVT 202

Query: 76  AYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYT 135
            YA    L  A++ F+  P ++  +W++++ GY+  GL  E   LF +M   G  P + T
Sbjct: 203 GYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETT 262

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC------KCIFE--- 186
              V+  CS +G             +    LN FV T L+DMYAKC      + IF+   
Sbjct: 263 WVTVISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELG 322

Query: 187 -----------------------AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
                                  A  LF   P G+N V W +MI GY+QNG    AIE F
Sbjct: 323 AYRNSVTWNAMISAYTRVGNLDSARELFNTMP-GRNVVTWNSMIAGYAQNGQSAMAIELF 381

Query: 224 RDM-RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK 282
           ++M   + +  ++ T  S+++AC  + A + G  V   +  +  + ++   +A+I MY++
Sbjct: 382 KEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSR 441

Query: 283 CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
           CG ++ A+R+ +     + VS+N++I GFA  G   EA++L   M    I+ D  T+  V
Sbjct: 442 CGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGV 501

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
           L   +    L   + V   I     + Y      ++D+  + G L+ A
Sbjct: 502 LTACSHAGLLEEGRKVFESIKDPAIDHYA----CMVDLLGRVGELEDA 545



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/328 (23%), Positives = 142/328 (43%), Gaps = 22/328 (6%)

Query: 343 LNCFASNI-DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK-QGNLDCAFMVFNLMQDK 400
           L   AS + + ++ + +H+ I+      + +    LI+   + +       ++FN   + 
Sbjct: 4   LGSIASRVGNFSHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNP 63

Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
           +V  +TS++   ++   + + +  F  M+  G+ PD  V   ++ +         G   H
Sbjct: 64  NVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAG-----NGGIGFH 118

Query: 461 AVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM--HTRDVITWTALIMGCAQNGK 518
           A  LK G  S   V N+++ +YA+ G I  A +VFD +  + R V  W A++ G  +   
Sbjct: 119 AHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWES 178

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA 578
             +A   +D M  R    + IT+  ++   +     E AR YF+ M +   +      + 
Sbjct: 179 EGQAQWLFDVMPER----NVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVS-----WN 229

Query: 579 CMIDLLGRSGKLIEAKALLDQMVG---EPDATVWKALLSACRVHGDLELGERAANNLFEL 635
            M+    ++G   E   L D+MV    EPD T W  ++SAC   GD  L       L + 
Sbjct: 230 AMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQK 289

Query: 636 E-PMNAMPYVQLSNMYSTAGKWEDAARV 662
           +  +N      L +MY+  G    A R+
Sbjct: 290 QIQLNCFVRTALLDMYAKCGSIGAARRI 317


>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
 gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
          Length = 766

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 243/656 (37%), Positives = 383/656 (58%), Gaps = 4/656 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +I  Y   G    A+ +F+    +N  +W+++I  ++      +A  LF  M   G  
Sbjct: 86  NHLITMYGRCGAPDSARVVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTM 145

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P Q+ L + +  CS  G L  G Q H  AIK     +  V   LV MY+K   + +   L
Sbjct: 146 PDQFALGSAICACSELGDLGLGRQVHAQAIKWESGSDLIVQNALVTMYSKSGSVGDGFAL 205

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE-SNQFTFPSILTACAAV- 248
           F+   D K+ ++W ++I G +Q G    A++ FR+M  EGV   N+F F S+  AC+ V 
Sbjct: 206 FERIRD-KDLISWGSIIAGLAQQGREMDALQIFREMIAEGVHHPNEFHFGSVFRACSVVV 264

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
           ++ ++G Q+HG  +    + N Y   +L DMYA+C +LDSAR++    E  + VSWNS+I
Sbjct: 265 NSLEYGEQIHGVSVKYQLDRNSYAGCSLSDMYARCNELDSARKVFYRIESPDLVSWNSLI 324

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
             F+ +G   EA+ LF +M    ++ D  T  ++L        L+  +S+HS +VK G  
Sbjct: 325 NAFSAKGLLSEAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQGRSIHSYLVKLGLG 384

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
           G   V+N+L+ MYA+  +   A  VF+   D+DV++W S++T C  H   E+  K FS +
Sbjct: 385 GDVIVSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQHLEDVFKLFSLL 444

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
             S    D + ++++LSA AEL   E  +QVHA   K G      + N L+  YAKCG +
Sbjct: 445 HRSMPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSL 504

Query: 489 NDANRVFDSMHT-RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           +DAN++F+ M T RDV +W++LI+G AQ G  KEAL  + +M   G KP+++TFVG+L A
Sbjct: 505 DDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLTA 564

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
           CS  GL +   +Y+  M   YGI P  +H +C++DLL R+G+L EA   +DQM  EPD  
Sbjct: 565 CSRVGLVDEGCYYYSIMKPEYGIVPTREHCSCVLDLLARAGRLSEAAKFVDQMPFEPDII 624

Query: 608 VWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
           +WK LL+A R H D+++G+RAA  +  ++P ++  YV L N+Y+++G W + AR++K M+
Sbjct: 625 MWKTLLAASRTHNDVDMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGNWNEFARLKKDMR 684

Query: 668 SRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMN 723
           S G++K PG SW++   ++ +FI EDR HP   +IY+ ++ I L + +AGY+P+++
Sbjct: 685 SSGVQKSPGKSWIKLKGELKVFIVEDRSHPESDEIYTMLEVIGLEMVKAGYIPELS 740



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 143/499 (28%), Positives = 240/499 (48%), Gaps = 40/499 (8%)

Query: 20  IGPARYTHNVGNSVKPASDL---NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAA 76
           +G  R  H      +  SDL   N  +  +S SG + +   LFE++ D+D  +W ++IA 
Sbjct: 164 LGLGRQVHAQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAG 223

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYT 135
            A  GR                               +++A ++F +M  EG + P+++ 
Sbjct: 224 LAQQGR-------------------------------EMDALQIFREMIAEGVHHPNEFH 252

Query: 136 LDNVLRLCS-LKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
             +V R CS +   L+ GEQ HG ++K   D N++    L DMYA+C  +  A  +F   
Sbjct: 253 FGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAGCSLSDMYARCNELDSARKVFYRI 312

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
            +  + V+W ++I  +S  G   +A+  F +MR  G+  +  T  ++L AC    A   G
Sbjct: 313 -ESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQG 371

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
             +H  ++  G   +V V ++L+ MYA+C D  SA  +   +   + V+WNS++    + 
Sbjct: 372 RSIHSYLVKLGLGGDVIVSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQH 431

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
              ++   LF  +H     +D  +  +VL+  A        K VH+   K G  G   ++
Sbjct: 432 QHLEDVFKLFSLLHRSMPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAMLS 491

Query: 375 NALIDMYAKQGNLDCAFMVFNLM-QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
           N LID YAK G+LD A  +F +M   +DV SW+SLI G A  G  +EAL  F+ MR  G+
Sbjct: 492 NGLIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGV 551

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL-VYAKCGCINDAN 492
            P+HV    +L+AC+ + +++ G   +++     G        S VL + A+ G +++A 
Sbjct: 552 KPNHVTFVGVLTACSRVGLVDEGCYYYSIMKPEYGIVPTREHCSCVLDLLARAGRLSEAA 611

Query: 493 RVFDSM-HTRDVITWTALI 510
           +  D M    D+I W  L+
Sbjct: 612 KFVDQMPFEPDIIMWKTLL 630



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 197/423 (46%), Gaps = 21/423 (4%)

Query: 245 CAAVSARDFGAQVHGCILSSG-----FEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
           C+ + +   G  VH  +L+S         N  + + LI MY +CG  DSAR + +     
Sbjct: 52  CSRLRSLPQGRLVHRHLLASSARDRFLAHNTILSNHLITMYGRCGAPDSARVVFDGMLDR 111

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           N VSW ++I   A+     +A+ LF  M       D F   S +   +   DL   + VH
Sbjct: 112 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQVH 171

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
           +  +K        V NAL+ MY+K G++   F +F  ++DKD+ISW S+I G A  G   
Sbjct: 172 AQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGREM 231

Query: 420 EALKYFSDMRISGI-CPDHVVVSSILSACAELT-VLEFGQQVHAVFLKSGGCSSLSVDNS 477
           +AL+ F +M   G+  P+     S+  AC+ +   LE+G+Q+H V +K     +     S
Sbjct: 232 DALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAGCS 291

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
           L  +YA+C  ++ A +VF  + + D+++W +LI   +  G   EA+  + +M   G +PD
Sbjct: 292 LSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRPD 351

Query: 538 YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMID-LLGRSGKLIEAKAL 596
            IT + LL AC         R         Y +K G      + + LL    + ++  + 
Sbjct: 352 GITVMALLCACVGYDALHQGRSIHS-----YLVKLGLGGDVIVSNSLLSMYARCLDFSSA 406

Query: 597 LD--QMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL--EPMNAMPYVQLSNMYST 652
           +D      + D   W ++L+AC  H  LE        LF L    M ++  + L+N+ S 
Sbjct: 407 MDVFHETHDRDVVTWNSILTACVQHQHLE----DVFKLFSLLHRSMPSLDRISLNNVLSA 462

Query: 653 AGK 655
           + +
Sbjct: 463 SAE 465



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 168/356 (47%), Gaps = 6/356 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           DR+ +   ++   YA    L  A+K+F      +  +W+SLI  +S  GL  EA  LF +
Sbjct: 283 DRNSYAGCSLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSE 342

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+  G RP   T+  +L  C     L +G   H Y +K     +  V   L+ MYA+C  
Sbjct: 343 MRDSGLRPDGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYARCLD 402

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
              A  +F    D ++ V W +++T   Q+ +     + F  +       ++ +  ++L+
Sbjct: 403 FSSAMDVFHETHD-RDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMPSLDRISLNNVLS 461

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV- 302
           A A +   +   QVH      G   +  + + LID YAKCG LD A +L E      +V 
Sbjct: 462 ASAELGYFEMVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGRDVF 521

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SW+S+IVG+A+ G+ KEAL LF +M    +K +  T+  VL    S + L +    +  I
Sbjct: 522 SWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLTA-CSRVGLVDEGCYYYSI 580

Query: 363 VKT--GFEGYKFVNNALIDMYAKQGNL-DCAFMVFNLMQDKDVISWTSLITGCAYH 415
           +K   G    +   + ++D+ A+ G L + A  V  +  + D+I W +L+     H
Sbjct: 581 MKPEYGIVPTREHCSCVLDLLARAGRLSEAAKFVDQMPFEPDIIMWKTLLAASRTH 636


>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
 gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
 gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
 gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 834

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 240/654 (36%), Positives = 388/654 (59%), Gaps = 5/654 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           DRD +    +I  Y   G +  A+ +F+  P K+  TW+++I G    G    + +LF+Q
Sbjct: 180 DRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           +  +   P  Y L  VL  CS+   L+ G+Q H + ++   +++A ++  L+D Y KC  
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGR 299

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +  A  LF   P+ KN ++WTT+++GY QN    +A+E F  M   G++ + +   SILT
Sbjct: 300 VIAAHKLFNGMPN-KNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILT 358

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           +CA++ A  FG QVH   + +    + YV ++LIDMYAKC  L  AR++ +     + V 
Sbjct: 359 SCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVL 418

Query: 304 WNSMIVGFARQGFH---KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
           +N+MI G++R G      EAL++F+ M  R I+    T+ S+L   AS   L  +K +H 
Sbjct: 419 FNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHG 478

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
           L+ K G     F  +ALID+Y+    L  + +VF+ M+ KD++ W S+  G       EE
Sbjct: 479 LMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEE 538

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
           AL  F ++++S   PD    +++++A   L  ++ GQ+ H   LK G   +  + N+L+ 
Sbjct: 539 ALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLD 598

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           +YAKCG   DA++ FDS  +RDV+ W ++I   A +G+GK+ALQ  ++M++ G +P+YIT
Sbjct: 599 MYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYIT 658

Query: 541 FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
           FVG+L ACSHAGL E+    FE M + +GI+P  +HY CM+ LLGR+G+L +A+ L+++M
Sbjct: 659 FVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKM 717

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAA 660
             +P A VW++LLS C   G++EL E AA      +P ++  +  LSN+Y++ G W +A 
Sbjct: 718 PTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAK 777

Query: 661 RVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIK 714
           +VR+ MK  G+ KEPG SW+  N +VHIF+S+D+ H     IY  +D++++ I+
Sbjct: 778 KVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831



 Score =  275 bits (702), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 182/634 (28%), Positives = 316/634 (49%), Gaps = 26/634 (4%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           GQ+     + D +  N +I  Y+ +G +  A+K+F + P +N  +WS+++   +++G+  
Sbjct: 68  GQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYE 127

Query: 116 EA---FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE----QFHGYAIKTCFDLNA 168
           E+   F  FW+ + +   P++Y L + ++ CS  GL  RG     Q   + +K+ FD + 
Sbjct: 128 ESLVVFLEFWRTRKDS--PNEYILSSFIQACS--GLDGRGRWMVFQLQSFLVKSGFDRDV 183

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
           +V T L+D Y K   I  A  +F   P+ K+ V WTTMI+G  + G  + +++ F  +  
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALPE-KSTVTWTTMISGCVKMGRSYVSLQLFYQLME 242

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
           + V  + +   ++L+AC+ +   + G Q+H  IL  G E +  + + LID Y KCG + +
Sbjct: 243 DNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIA 302

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
           A +L       N +SW +++ G+ +   HKEA+ LF  M    +K D +   S+L   AS
Sbjct: 303 AHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCAS 362

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
              L     VH+  +K       +V N+LIDMYAK   L  A  VF++    DV+ + ++
Sbjct: 363 LHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAM 422

Query: 409 ITGCAYHGS---YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
           I G +  G+     EAL  F DMR   I P  +   S+L A A LT L   +Q+H +  K
Sbjct: 423 IEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK 482

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
            G    +   ++L+ VY+ C C+ D+  VFD M  +D++ W ++  G  Q  + +EAL  
Sbjct: 483 YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNL 542

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
           + ++     +PD  TF  ++ A  +    +  + +   + K  G++  P     ++D+  
Sbjct: 543 FLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLK-RGLECNPYITNALLDMYA 601

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL-----EPMNA 640
           + G   +A    D      D   W +++S+   HG+   G++A   L ++     EP N 
Sbjct: 602 KCGSPEDAHKAFDS-AASRDVVCWNSVISSYANHGE---GKKALQMLEKMMSEGIEP-NY 656

Query: 641 MPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
           + +V + +  S AG  ED  +  +LM   GI  E
Sbjct: 657 ITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPE 690



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 152/543 (27%), Positives = 261/543 (48%), Gaps = 38/543 (6%)

Query: 36  ASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF 95
           AS +N  +  +   G +  A +LF  M +++  +W T+++ Y  +               
Sbjct: 284 ASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQN--------------- 328

Query: 96  KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
                            L  EA ELF  M   G +P  Y   ++L  C+    L  G Q 
Sbjct: 329 ----------------ALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQV 372

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGY 215
           H Y IK     +++V   L+DMYAKC C+ +A  +F +F    + V +  MI GYS+ G 
Sbjct: 373 HAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFA-AADVVLFNAMIEGYSRLGT 431

Query: 216 GF---KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYV 272
            +   +A+  FRDMR   +  +  TF S+L A A++++     Q+HG +   G   +++ 
Sbjct: 432 QWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFA 491

Query: 273 QSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI 332
            SALID+Y+ C  L  +R + +  ++ + V WNSM  G+ +Q  ++EAL+LF ++     
Sbjct: 492 GSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRE 551

Query: 333 KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM 392
           + D+FT+ +++    +   +   +  H  ++K G E   ++ NAL+DMYAK G+ + A  
Sbjct: 552 RPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHK 611

Query: 393 VFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV 452
            F+    +DV+ W S+I+  A HG  ++AL+    M   GI P+++    +LSAC+   +
Sbjct: 612 AFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGL 671

Query: 453 LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD-VITWTALIM 511
           +E G +   + L+ G          +V +  + G +N A  + + M T+   I W +L+ 
Sbjct: 672 VEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLS 731

Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIK 571
           GCA+ G   E  +   +M       D  +F  L    +  G+   A+   E M KV G+ 
Sbjct: 732 GCAKAGN-VELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERM-KVEGVV 789

Query: 572 PGP 574
             P
Sbjct: 790 KEP 792



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 153/523 (29%), Positives = 265/523 (50%), Gaps = 13/523 (2%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           +L+L +   LL      HG  I    +L+ ++   L+++Y++   +  A  +F+  P+ +
Sbjct: 50  LLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPE-R 108

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILTACAAVSARD--FGA 255
           N V+W+TM++  + +G   +++  F +  R      N++   S + AC+ +  R      
Sbjct: 109 NLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVF 168

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           Q+   ++ SGF+ +VYV + LID Y K G++D AR + +     + V+W +MI G  + G
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
               +L LF ++   ++  D +   +VL+  +    L   K +H+ I++ G E    + N
Sbjct: 229 RSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMN 288

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
            LID Y K G +  A  +FN M +K++ISWT+L++G   +  ++EA++ F+ M   G+ P
Sbjct: 289 VLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKP 348

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           D    SSIL++CA L  L FG QVHA  +K+   +   V NSL+ +YAKC C+ DA +VF
Sbjct: 349 DMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVF 408

Query: 496 DSMHTRDVITWTALIMGCAQNGKG---KEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
           D     DV+ + A+I G ++ G      EAL  +  M  R  +P  +TFV LL A +   
Sbjct: 409 DIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLT 468

Query: 553 LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
               ++     M K YG+       + +ID+      L +++ + D+M    D  +W ++
Sbjct: 469 SLGLSKQIHGLMFK-YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEM-KVKDLVIWNSM 526

Query: 613 LSACRVHGDLELGERAANNLFELEPMNAMP-YVQLSNMYSTAG 654
            +      +    E A N   EL+     P     +NM + AG
Sbjct: 527 FAGYVQQSE---NEEALNLFLELQLSRERPDEFTFANMVTAAG 566



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 143/286 (50%), Gaps = 17/286 (5%)

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
           +  +L   AS+  L+    VH  I+  G E   +++N LI++Y++ G +  A  VF  M 
Sbjct: 47  FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDM-RISGICPDHVVVSSILSACAELTVLEFGQ 457
           +++++SW+++++ C +HG YEE+L  F +  R     P+  ++SS + AC+ L     G+
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLD----GR 162

Query: 458 ------QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIM 511
                 Q+ +  +KSG    + V   L+  Y K G I+ A  VFD++  +  +TWT +I 
Sbjct: 163 GRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMIS 222

Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIK 571
           GC + G+   +LQ + Q++     PD      +L ACS     E  +     + + YG++
Sbjct: 223 GCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR-YGLE 281

Query: 572 PGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV--WKALLSA 615
                   +ID   + G++I A  L +   G P+  +  W  LLS 
Sbjct: 282 MDASLMNVLIDSYVKCGRVIAAHKLFN---GMPNKNIISWTTLLSG 324


>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
          Length = 749

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 235/627 (37%), Positives = 376/627 (59%), Gaps = 3/627 (0%)

Query: 96  KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
           +N  +W+S+I  +   G   +A  LF  M   G    Q+ L + +R C+  G +  G Q 
Sbjct: 98  RNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQV 157

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGY 215
           H +A+K+    +  V   LV MY+K   + +   LF+   D K+ ++W ++I G++Q G+
Sbjct: 158 HAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKD-KDLISWGSIIAGFAQQGF 216

Query: 216 GFKAIECFRDMRVEGVE-SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQS 274
             +A++ FR+M VEG    N+F F S   AC AV + ++G Q+HG  +    + ++YV  
Sbjct: 217 EMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGC 276

Query: 275 ALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKI 334
           +L DMYA+C +LDSAR      E  + VSWNS++  ++ +G   EAL LF +M    ++ 
Sbjct: 277 SLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRP 336

Query: 335 DDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVF 394
           D  T   +L        L + + +HS +VK G +G   V N+L+ MYA+  +L  A  VF
Sbjct: 337 DGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVF 396

Query: 395 NLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLE 454
           + ++D+DV++W S++T CA H   EE LK FS +  S    D + ++++LSA AEL   E
Sbjct: 397 HEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFE 456

Query: 455 FGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM-HTRDVITWTALIMGC 513
             +QVHA   K+G      + N+L+  YAKCG ++DA R+F+ M + RDV +W++LI+G 
Sbjct: 457 MVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGY 516

Query: 514 AQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPG 573
           AQ G  KEA   + +M + G +P+++TF+G+L ACS  G      +Y+  M+  YGI P 
Sbjct: 517 AQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPT 576

Query: 574 PDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLF 633
            +H +C++DLL R+GKL EA   +DQM  EPD  +WK LL+A ++H D+E+G+RAA  + 
Sbjct: 577 REHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGIL 636

Query: 634 ELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISED 693
            ++P ++  YV L N+Y+ +G W + AR++K M++ G++K PG SWV+   ++ +FI ED
Sbjct: 637 NIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVED 696

Query: 694 RGHPLRTDIYSKIDEIMLLIKEAGYVP 720
           R HP   +IY+ ++ I + + +AGYVP
Sbjct: 697 RSHPESEEIYAMLELIGMEMIKAGYVP 723



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 149/504 (29%), Positives = 249/504 (49%), Gaps = 14/504 (2%)

Query: 11  FSLRCRSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTW 70
           FS   RS   G A     +G++V+  ++L     D     ++       E+ SD      
Sbjct: 123 FSSMLRS---GTAADQFALGSAVRACTELG----DVGTGRQVHAHALKSERGSDL--IVQ 173

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG-Y 129
           N ++  Y+ +G + +   LF     K+  +W S+I G++  G ++EA ++F +M +EG +
Sbjct: 174 NALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSH 233

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
            P+++   +  R C   G  + GEQ HG +IK   D + +V   L DMYA+CK +  A  
Sbjct: 234 HPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARV 293

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
            F    +  + V+W +++  YS  G   +A+  F +MR  G+  +  T   +L AC    
Sbjct: 294 AFYRI-EAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRD 352

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
           A   G  +H  ++  G + +V V ++L+ MYA+C DL SA  +    +  + V+WNS++ 
Sbjct: 353 ALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILT 412

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
             A+    +E L LF  ++  +  +D  +  +VL+  A        K VH+   K G   
Sbjct: 413 ACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVD 472

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLM-QDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
            + ++N LID YAK G+LD A  +F +M  ++DV SW+SLI G A  G  +EA   FS M
Sbjct: 473 DRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRM 532

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LVLVYAKCGC 487
           R  GI P+HV    +L+AC+ +  +  G   +++     G        S +V + A+ G 
Sbjct: 533 RSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGK 592

Query: 488 INDANRVFDSM-HTRDVITWTALI 510
           + +A    D M    D+I W  L+
Sbjct: 593 LTEAANFIDQMPFEPDIIMWKTLL 616



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 135/432 (31%), Positives = 217/432 (50%), Gaps = 16/432 (3%)

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
           +L  M+  G+N V+W ++I  + QNG    A+  F  M   G  ++QF   S + AC  +
Sbjct: 91  HLITMY--GRNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTEL 148

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
                G QVH   L S   +++ VQ+AL+ MY+K G +D    L E  +  + +SW S+I
Sbjct: 149 GDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSII 208

Query: 309 VGFARQGFHKEALSLFKKMHAR-DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
            GFA+QGF  EAL +F++M        ++F + S      +       + +H L +K   
Sbjct: 209 AGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRL 268

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
           +   +V  +L DMYA+  NLD A + F  ++  D++SW S++   +  G   EAL  FS+
Sbjct: 269 DRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSE 328

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           MR SG+ PD + V  +L AC     L  G+ +H+  +K G    +SV NSL+ +YA+C  
Sbjct: 329 MRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSD 388

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           ++ A  VF  +  +DV+TW +++  CAQ+   +E L+ +  +       D I+   +L A
Sbjct: 389 LSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSA 448

Query: 548 CSHAGLAENARWYFESMDKV--YGIKPG--PDHYA--CMIDLLGRSGKLIEAKALLDQMV 601
            +  G       YFE + +V  Y  K G   D      +ID   + G L +A  L + M 
Sbjct: 449 SAELG-------YFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMG 501

Query: 602 GEPDATVWKALL 613
              D   W +L+
Sbjct: 502 NNRDVFSWSSLI 513



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 197/430 (45%), Gaps = 37/430 (8%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSG-------FEANVYVQSALIDMYAKCGDLDSAR 290
           + ++++AC+ + +   G +VH  +++S           N  + + LI MY +        
Sbjct: 47  YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGR-------- 98

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
                    N VSW S+I    + G   +AL LF  M       D F   S +       
Sbjct: 99  ---------NPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 149

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           D+   + VH+  +K+       V NAL+ MY+K G +D  FM+F  ++DKD+ISW S+I 
Sbjct: 150 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 209

Query: 411 GCAYHGSYEEALKYFSDMRISGI-CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
           G A  G   EAL+ F +M + G   P+     S   AC  +   E+G+Q+H + +K    
Sbjct: 210 GFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 269

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
             L V  SL  +YA+C  ++ A   F  +   D+++W +++   +  G   EAL  + +M
Sbjct: 270 RDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEM 329

Query: 530 LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA----CMIDLLG 585
              G +PD IT  GLL AC    +  +A  Y   +   Y +K G D        ++ +  
Sbjct: 330 RDSGLRPDGITVRGLLCAC----VGRDA-LYHGRLIHSYLVKLGLDGDVSVCNSLLSMYA 384

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ 645
           R   L  A  +  + + + D   W ++L+AC  H   E   +  + L + EP  ++  + 
Sbjct: 385 RCSDLSSAMDVFHE-IKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEP--SLDRIS 441

Query: 646 LSNMYSTAGK 655
           L+N+ S + +
Sbjct: 442 LNNVLSASAE 451



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 173/359 (48%), Gaps = 4/359 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           DRD +   ++   YA    L  A+  F      +  +W+S++  YS  GL  EA  LF +
Sbjct: 269 DRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSE 328

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+  G RP   T+  +L  C  +  L  G   H Y +K   D +  V   L+ MYA+C  
Sbjct: 329 MRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSD 388

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +  A  +F    D ++ V W +++T  +Q+ +  + ++ F  +       ++ +  ++L+
Sbjct: 389 LSSAMDVFHEIKD-QDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLS 447

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV- 302
           A A +   +   QVH     +G   +  + + LID YAKCG LD A RL E    + +V 
Sbjct: 448 ASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVF 507

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SW+S+IVG+A+ G+ KEA  LF +M +  I+ +  T+  VL   +    +N     +S++
Sbjct: 508 SWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIM 567

Query: 363 -VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYE 419
             + G    +   + ++D+ A+ G L  A    + M  + D+I W +L+     H   E
Sbjct: 568 EPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDME 626


>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Brachypodium distachyon]
          Length = 682

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 254/667 (38%), Positives = 383/667 (57%), Gaps = 13/667 (1%)

Query: 147 GLLQRGEQFHGYAIKTC-FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTT 205
           G L  G+  H   I+   FD+       L+  Y KC  +  A  +F   P  +N V+   
Sbjct: 25  GELCTGKAIHAQMIRAAHFDVIQH--NHLIAFYGKCGRLGLARQMFDAMPS-RNAVSGNL 81

Query: 206 MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
           +++GY+  G    A+     ++      N++   + L+A A V +   G Q HG  + SG
Sbjct: 82  LMSGYASAGRHSDALAL---LKAADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSG 138

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
            + + YV +A++ MY +C  ++ A ++ E     +  ++NSMI GF   G    ++ + +
Sbjct: 139 LQEHPYVCNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVR 198

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
            M     + D  +Y +VL   AS  +L     VH+  +K   E   +V +AL+DMY   G
Sbjct: 199 SMVGEVEQWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMY---G 255

Query: 386 NLDCA---FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
             DCA      F ++ +K+V+SWT+++T    +  +E+AL+ F D+ I G+ P+    + 
Sbjct: 256 KCDCARDAHSAFEVLPEKNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAV 315

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
            L++CA L  L+ G  + A  +K+G   +LSV N+L+ +Y+K G I+DA RVF SM  RD
Sbjct: 316 ALNSCAGLAALKNGNALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRD 375

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
           V++W ++I+G A +G  +EA+  +  ML     P Y+TFVG+L AC+  GL +   +Y  
Sbjct: 376 VVSWNSVIIGYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLN 435

Query: 563 SMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDL 622
            M K  GIKPG +HY CM+ LL R+G+L EA+  +       D   WK+LLS+C+V+ + 
Sbjct: 436 IMMKEMGIKPGREHYTCMVGLLCRAGRLDEAEQFILSNCIGTDVVAWKSLLSSCQVYKNY 495

Query: 623 ELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVET 682
            LG R A  + +L+P +   YV LSNMY+ A +W+   +VRKLM+ RG+RKEPG SW++ 
Sbjct: 496 GLGHRVAEQILQLKPNDVGTYVLLSNMYAKANRWDGVVKVRKLMRERGVRKEPGVSWIQV 555

Query: 683 NSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHS 742
            S+VH+F SED+ H     I  K+ E++  IK  GYVP+    LH+VE E KE  L YHS
Sbjct: 556 GSEVHVFTSEDKNHKWINQITIKLKELIGQIKVIGYVPNCAVVLHDVEAEQKEEHLMYHS 615

Query: 743 EKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGN 802
           EK+A+AFGL+  P+G  IRI KNLR+C DCH A+K IS V  R I++RD+ RFH    G 
Sbjct: 616 EKMALAFGLIHSPEGETIRIMKNLRICDDCHVAIKLISVVTRRKIVVRDTVRFHCIDDGV 675

Query: 803 CSCGDYW 809
           CSC DYW
Sbjct: 676 CSCDDYW 682



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 133/450 (29%), Positives = 224/450 (49%), Gaps = 6/450 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D    N +IA Y   GRL  A+++F+  P +N  + + L+ GY++ G   +A  L   ++
Sbjct: 44  DVIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSGYASAGRHSDALAL---LK 100

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
              +  ++Y L   L   +       G Q HGYA+K+    + +V   ++ MY +C  + 
Sbjct: 101 AADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPYVCNAVLHMYCQCAHVE 160

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A  +F+    G +  A+ +MI G+   G    +I   R M  E  + +  ++ ++L  C
Sbjct: 161 DAVKVFENV-SGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVGEVEQWDHVSYVAVLGHC 219

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A+      G QVH   L    E NVYV SAL+DMY KC     A    E     N VSW 
Sbjct: 220 ASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLPEKNVVSWT 279

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +++  + +    ++AL LF  +    ++ ++FTY   LN  A    L N  ++ +  +KT
Sbjct: 280 AVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALKNGNALSASAMKT 339

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G  G   V NAL++MY+K G++  A+ VF  M  +DV+SW S+I G A+HG   EA+  F
Sbjct: 340 GHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGYAHHGLAREAMCVF 399

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD-NSLVLVYAK 484
            DM ++ I P +V    +L ACA+L +++ G     + +K  G          +V +  +
Sbjct: 400 HDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIKPGREHYTCMVGLLCR 459

Query: 485 CGCINDANR-VFDSMHTRDVITWTALIMGC 513
            G +++A + +  +    DV+ W +L+  C
Sbjct: 460 AGRLDEAEQFILSNCIGTDVVAWKSLLSSC 489



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 122/255 (47%), Gaps = 3/255 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            Q  ++  +++ +  + ++  Y      R+A   F   P KN  +W++++  Y+      
Sbjct: 233 AQALKRRLEQNVYVGSALVDMYGKCDCARDAHSAFEVLPEKNVVSWTAVMTAYTQNERFE 292

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           +A +LF  +++EG RP+++T    L  C+    L+ G      A+KT       V   L+
Sbjct: 293 DALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALKNGNALSASAMKTGHWGALSVCNALM 352

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           +MY+K   I +A  +F   P  ++ V+W ++I GY+ +G   +A+  F DM +  +  + 
Sbjct: 353 NMYSKSGSIHDAWRVFLSMP-WRDVVSWNSVIIGYAHHGLAREAMCVFHDMLLAEIVPSY 411

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLE 294
            TF  +L ACA +   D G      ++   G +      + ++ +  + G LD A + + 
Sbjct: 412 VTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIKPGREHYTCMVGLLCRAGRLDEAEQFIL 471

Query: 295 YSEIDNE-VSWNSMI 308
            + I  + V+W S++
Sbjct: 472 SNCIGTDVVAWKSLL 486



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 4/155 (2%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++  Y+ SG + +A ++F   P+++  +W+S+I GY+++GL  EA  +F  M L    
Sbjct: 349 NALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGYAHHGLAREAMCVFHDMLLAEIV 408

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC-FDLNAFVVTGLVDMYAKCKCIFEAEY 189
           PS  T   VL  C+  GL+  G  +    +K           T +V +  +   + EAE 
Sbjct: 409 PSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIKPGREHYTCMVGLLCRAGRLDEAEQ 468

Query: 190 LFKMFPDGKNHVAWTTMITG---YSQNGYGFKAIE 221
                  G + VAW ++++    Y   G G +  E
Sbjct: 469 FILSNCIGTDVVAWKSLLSSCQVYKNYGLGHRVAE 503



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 5/115 (4%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF----KNFFTW 101
           +S SG I +A ++F  M  RD  +WN++I  YA+ G  REA  +F++        ++ T+
Sbjct: 355 YSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGYAHHGLAREAMCVFHDMLLAEIVPSYVTF 414

Query: 102 SSLIYGYSNYGL-DIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
             ++   +  GL D   + L   M+  G +P +     ++ L    G L   EQF
Sbjct: 415 VGVLLACAQLGLVDEGLYYLNIMMKEMGIKPGREHYTCMVGLLCRAGRLDEAEQF 469


>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
          Length = 886

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 258/710 (36%), Positives = 398/710 (56%), Gaps = 20/710 (2%)

Query: 113 LDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVT 172
           + + A +L   + +E  R     + ++LR  +    L+ G Q H   +K  F  +  +  
Sbjct: 184 IQLRAIDLLGFLPMERRR----MIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNN 239

Query: 173 GLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
            L+DMYAKC  +  A  +F   P+ +N V+WT ++ G+  +G   + +  F +MR  G  
Sbjct: 240 NLIDMYAKCGKLHMAGEVFDGMPE-RNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTS 298

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
            N+FT  + L AC        G Q+HG  + +GFE +  V ++L+ MY+K      ARR+
Sbjct: 299 PNEFTLSATLKACGG--GTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRV 356

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR-DIKIDDFTYPSVLNCFASNID 351
            +     N  +WNSMI G+A  G  +++L +F++M  R D + D+FT+ S+L   +    
Sbjct: 357 FDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGA 416

Query: 352 LNNAKSVHSLIVKTGFE--GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
                 VH+ +   G        +  AL+D+Y K   L  A  VF+ ++ ++ I WT++I
Sbjct: 417 AREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVI 476

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
            G A  G  +EA+  F     SG+  D  V+SS+++  A+  ++E G+QVH    K+   
Sbjct: 477 VGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAG 536

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
             +SV NSLV +Y KCG   +A R F  M  R+V++WTA+I G  ++G G+EA+  +++M
Sbjct: 537 LDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEM 596

Query: 530 LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGK 589
            A G + D + ++ LL ACSH+GL +  R YF  + +   ++P  +HYACM+DLLGR+G+
Sbjct: 597 QAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGE 656

Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNM 649
           L EAK L+  M  EP   VW+ LLSACRVH D+ +G    + L  ++  N + YV LSN+
Sbjct: 657 LREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNI 716

Query: 650 YSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFI-SEDRGHPLRTDIYSKIDE 708
            + AG+W +   +R  M+ +G+RK+ GCSW E + +VH F    D  HP   DI   + E
Sbjct: 717 LAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALRE 776

Query: 709 IMLLIKEA-GYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAP-------- 759
           +   ++E  GY  D   ALH+V+EE +   L  HSE+LAV   LL    G          
Sbjct: 777 VEARMRERLGYSGDARCALHDVDEESRVESLREHSERLAVGLWLLRDGTGDDGGGGGGEV 836

Query: 760 IRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +R++KNLRVCGDCH  +K +SAV  R +++RD+NRFH F+ G CSC DYW
Sbjct: 837 VRVYKNLRVCGDCHEFLKGLSAVVRRVVVVRDANRFHRFQNGACSCRDYW 886



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 128/381 (33%), Positives = 205/381 (53%), Gaps = 6/381 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +I  YA  G+L  A ++F+  P +N  +W++L+ G+ ++G   E   LF +M+  G  
Sbjct: 239 NNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTS 298

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+++TL   L+ C   G  + G Q HG  ++T F+ +  V   LV MY+K +   +A  +
Sbjct: 299 PNEFTLSATLKACG--GGTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRV 356

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILTACAAVS 249
           F + P  +N   W +MI+GY+  G G  ++  FR+M R    + ++FTF S+L AC+ + 
Sbjct: 357 FDVIPS-RNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLG 415

Query: 250 ARDFGAQVHGCILSSGFE--ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           A   GAQVH  +   G    +N  +  AL+D+Y KC  L  A ++ +  E  N + W ++
Sbjct: 416 AAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTV 475

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           IVG A++G  KEA+ LF++  +  ++ D     SV+  FA    +   K VH    KT  
Sbjct: 476 IVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPA 535

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
                V N+L+DMY K G    A   F  M  ++V+SWT++I G   HG   EA+  F +
Sbjct: 536 GLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEE 595

Query: 428 MRISGICPDHVVVSSILSACA 448
           M+  G+  D V   ++LSAC+
Sbjct: 596 MQAEGVEADEVAYLALLSACS 616



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 112/453 (24%), Positives = 206/453 (45%), Gaps = 41/453 (9%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +V +S      +A ++F+ +  R+  TWN+MI+ YA++G+ R++  +F E   ++  
Sbjct: 338 NSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRH-- 395

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH-GY 158
                                         +P ++T  ++L+ CS  G  + G Q H   
Sbjct: 396 ----------------------------DEQPDEFTFASLLKACSGLGAAREGAQVHAAM 427

Query: 159 AIKTCFDL-NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
           A++      NA +   L+D+Y KC  +  A  +F    + +N + WTT+I G++Q G   
Sbjct: 428 AVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGL-ERRNAIQWTTVIVGHAQEGQVK 486

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           +A+  FR     GV ++     S++   A  +  + G QVH     +    +V V ++L+
Sbjct: 487 EAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLV 546

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
           DMY KCG    A R        N VSW +MI G  + G  +EA+ LF++M A  ++ D+ 
Sbjct: 547 DMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEV 606

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA-LIDMYAKQGNL-DCAFMVFN 395
            Y ++L+  + +  ++  +   S I +      K  + A ++D+  + G L +   ++ +
Sbjct: 607 AYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILS 666

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSD--MRISGICP-DHVVVSSILSACAELTV 452
           +  +  V  W +L++ C  H       +   D  + + G  P ++V++S+IL+   E   
Sbjct: 667 MPMEPTVGVWQTLLSACRVHKDVAVG-REVGDVLLAVDGDNPVNYVMLSNILAEAGEWRE 725

Query: 453 LE--FGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            +   G        K GGCS   VD  +   Y 
Sbjct: 726 CQGIRGAMRRKGLRKQGGCSWTEVDKEVHFFYG 758


>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 707

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 264/743 (35%), Positives = 405/743 (54%), Gaps = 62/743 (8%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPF--KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG 128
            + I+ Y   G +  A+K+F+ TP   +   +W++++  Y       +A  LF QM    
Sbjct: 23  TSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMP--- 79

Query: 129 YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
                                QR               N     G++  Y K   + +A 
Sbjct: 80  ---------------------QR---------------NTVSFNGMISGYVKNGMVADAR 103

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
            +F + P+ +N V+WT+M+ GY Q G   +A + F +M    V S       +L      
Sbjct: 104 KVFDVMPE-RNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRID 162

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
            A+     +         E +V V + +I  Y + G LD AR L +  ++ N  +W +M+
Sbjct: 163 DAKKLFDMIP--------EKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMV 214

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV-HSLIVKTGF 367
            G+A+ G    A  LF+ M  R+    + ++ ++L  +  +  +  A  +  ++ VK   
Sbjct: 215 SGYAKNGRVDVARKLFEVMPERN----EVSWTAMLMGYTQSGRMKEAFELFEAMPVK--- 267

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
             +    N +I  +   G +  A M+F  M+++D  +W ++I      G   EAL  F+ 
Sbjct: 268 --WIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFAR 325

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           M+  G+  +   + S+LS CA L  L+ G+QVHA  ++S     L V + L+ +Y KCG 
Sbjct: 326 MQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGD 385

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           +  A  +F+    +DV+ W ++I G +Q+G G+EAL  +  M + G +PD +TF+G+L A
Sbjct: 386 LVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSA 445

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
           CS++G  +     FE+M   Y ++PG +HYACM+DLLGR+G++ EA  L+++M  EPDA 
Sbjct: 446 CSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAI 505

Query: 608 VWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
           VW ALL ACR H  L+L E A   L +LEP NA PYV LS+MY+T G+W D   +RK + 
Sbjct: 506 VWGALLGACRNHMKLDLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKIN 565

Query: 668 SRGIRKEPGCSWVETNSQVHIFISED-RGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFAL 726
            R I K PGCSW+E   +VH+F   D + HP +  I   ++++   ++EAGY PD +F L
Sbjct: 566 RRVI-KFPGCSWIEVEKKVHMFTGGDSKSHPEQHMITQMLEKLSGFLREAGYCPDGSFVL 624

Query: 727 HNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRH 786
           H+V+EE K   L YHSE+LAVA+GLL +P+G PIR+ KNLRVCGDCH+A+K I+ V  R 
Sbjct: 625 HDVDEEEKTHSLGYHSERLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKVTGRE 684

Query: 787 IILRDSNRFHHFKAGNCSCGDYW 809
           IILRD+NRFHHFK G+CSC D+W
Sbjct: 685 IILRDANRFHHFKDGSCSCKDFW 707



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 234/487 (48%), Gaps = 67/487 (13%)

Query: 58  LFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEA 117
           LF++M  R+  ++N MI+ Y  +G + +A+K+F+  P +N  +W+S++ GY   G+  EA
Sbjct: 74  LFDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEA 133

Query: 118 FELFWQMQ---------LEGYRPSQYTLDNVLRLCSL---KGLLQRGEQFHGY------- 158
            +LFW+M          + G    +  +D+  +L  +   K ++       GY       
Sbjct: 134 EKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLD 193

Query: 159 AIKTCFD----LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
             +  FD     N F  T +V  YAK   +  A  LF++ P+ +N V+WT M+ GY+Q+G
Sbjct: 194 EARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPE-RNEVSWTAMLMGYTQSG 252

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQS 274
              +A E F  M V+ +            AC                            +
Sbjct: 253 RMKEAFELFEAMPVKWI-----------VAC----------------------------N 273

Query: 275 ALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKI 334
            +I  +   G++  AR + E  +  +E +WN+MI  F R+G   EAL LF +M    + +
Sbjct: 274 EMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVAL 333

Query: 335 DDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVF 394
           +  +  SVL+  AS   L++ + VH+ +V++ F+   +V + LI MY K G+L  A  +F
Sbjct: 334 NFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIF 393

Query: 395 NLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLE 454
           N    KDV+ W S+ITG + HG  EEAL  F DM  SG+ PD V    +LSAC+    ++
Sbjct: 394 NRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVK 453

Query: 455 FGQQVHAVFLKSGGCSSLSVDN--SLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIM 511
            G ++    +K        +++   +V +  + G +++A  + + M    D I W AL+ 
Sbjct: 454 EGFEIFEA-MKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLG 512

Query: 512 GCAQNGK 518
            C  + K
Sbjct: 513 ACRNHMK 519



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 213/449 (47%), Gaps = 48/449 (10%)

Query: 52  IDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNY 111
           ID+A +LF+ + ++D      MI  Y   GRL EA++LF+E   +N FTW++++ GY+  
Sbjct: 161 IDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKN 220

Query: 112 G-LDI---------EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG-EQFHGYAI 160
           G +D+         E  E+ W   L GY  S              G ++   E F    +
Sbjct: 221 GRVDVARKLFEVMPERNEVSWTAMLMGYTQS--------------GRMKEAFELFEAMPV 266

Query: 161 KTCFDLNAFVVT-GLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           K     N  ++  GL     + + +FE           ++   W  MI  + + G   +A
Sbjct: 267 KWIVACNEMILQFGLAGEMHRARMMFEGM-------KERDEGTWNAMIKVFERKGLDLEA 319

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           +  F  M+ EGV  N  +  S+L+ CA++++ D G QVH  ++ S F+ ++YV S LI M
Sbjct: 320 LGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITM 379

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           Y KCGDL  A+ +       + V WNSMI G+++ G  +EAL++F  M +  ++ D+ T+
Sbjct: 380 YVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTF 439

Query: 340 PSVLNCFASNIDLNNAKSVHSLI-----VKTGFEGYKFVNNALIDMYAKQGNLDCAF-MV 393
             VL+  + +  +     +   +     V+ G E Y      ++D+  + G +D A  +V
Sbjct: 440 IGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYA----CMVDLLGRAGRVDEAMELV 495

Query: 394 FNLMQDKDVISWTSLITGCAYHGSY---EEALKYFSDMRISGICPDHVVVSSILSACAEL 450
             +  + D I W +L+  C  H      E A++  + +      P +V++S + +     
Sbjct: 496 EKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEPKNAGP-YVLLSHMYATKGRW 554

Query: 451 TVLE-FGQQVHAVFLKSGGCSSLSVDNSL 478
             +E   ++++   +K  GCS + V+  +
Sbjct: 555 RDVEVLRKKINRRVIKFPGCSWIEVEKKV 583



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 148/296 (50%), Gaps = 34/296 (11%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF------ 99
           ++ +G +D A +LFE M +R+  +W  M+  Y  SGR++EA +LF   P K         
Sbjct: 217 YAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMI 276

Query: 100 -------------------------TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQY 134
                                    TW+++I  +   GLD+EA  LF +MQ EG   +  
Sbjct: 277 LQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFP 336

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
           ++ +VL +C+    L  G Q H   +++ FD + +V + L+ MY KC  +  A+ +F  F
Sbjct: 337 SMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRF 396

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
              K+ V W +MITGYSQ+G G +A+  F DM   GV+ ++ TF  +L+AC+       G
Sbjct: 397 L-FKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEG 455

Query: 255 AQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
            ++   +  +   E  +   + ++D+  + G +D A  L+E   ++ + + W +++
Sbjct: 456 FEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALL 511



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 105/229 (45%), Gaps = 40/229 (17%)

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDS--MHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
           SL  + S +  Y + G I++A +VFD+  +  R + +W A++    ++ K ++AL  +DQ
Sbjct: 18  SLCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQ 77

Query: 529 MLARGTKPDYITFVGLLFACSHAGLAENARWYFESM------------------------ 564
           M  R T    ++F G++      G+  +AR  F+ M                        
Sbjct: 78  MPQRNT----VSFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEA 133

Query: 565 DKVYGIKPGPD--HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA-CRVHGD 621
           +K++   P  +   +  MI  L +  ++ +AK L D M+ E D  V   ++   C+V G 
Sbjct: 134 EKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFD-MIPEKDVVVVTNMIGGYCQV-GR 191

Query: 622 LELGERAANNLF-ELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
           L+     A  LF E++  N   +  + + Y+  G+ + A ++ ++M  R
Sbjct: 192 LD----EARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPER 236


>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 765

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 239/695 (34%), Positives = 387/695 (55%), Gaps = 5/695 (0%)

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           E  E    M   G   +  + + + ++C   G L  G+ FH   ++   + N F+   ++
Sbjct: 75  EVHEFIRNMDKVGISINPRSYEYLFKMCGTLGALSDGKLFHNR-LQRMANSNKFIDNCIL 133

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
            MY  CK    AE  F    D ++  +W+T+I+ Y++ G   +A+  F  M   G+  N 
Sbjct: 134 KMYCDCKSFTSAERFFDKIVD-QDLSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNS 192

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
             F +++ +    S  D G Q+H  ++  GF AN+ +++ + +MY KCG LD A      
Sbjct: 193 SIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATNK 252

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               N V+   ++VG+ +   +++AL LF KM +  +++D F +  +L   A+  DL   
Sbjct: 253 MTRKNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYTG 312

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           K +HS  +K G E    V   L+D Y K    + A   F  + + +  SW++LI G    
Sbjct: 313 KQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQS 372

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G ++ AL+ F  +R  G+  +  + ++I  AC+ ++ L  G Q+HA  +K G  + LS +
Sbjct: 373 GQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGE 432

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           ++++ +Y+KCG ++ A++ F ++   D + WTA+I   A +GK  EAL+ + +M   G +
Sbjct: 433 SAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVR 492

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           P+ +TF+GLL ACSH+GL +  +   +SM   YG+ P  DHY CMID+  R+G L EA  
Sbjct: 493 PNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALE 552

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
           ++  +  EPD   WK+LL  C  H +LE+G  AA+N+F L+P+++  YV + N+Y+ AGK
Sbjct: 553 VIRSLPFEPDVMSWKSLLGGCWSHRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGK 612

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
           W++AA+ RK+M  R +RKE  CSW+    +VH F+  DR HP    IYSK+ E+    K+
Sbjct: 613 WDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKELNFSFKK 672

Query: 716 AG-YVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHT 774
           +   + +   AL +  E  ++  L  HSE+LA+A+GL+      PI +FKN R C DCH 
Sbjct: 673 SKERLLNEENALCDFTERKEQ--LLDHSERLAIAYGLICTAADTPIMVFKNTRSCKDCHD 730

Query: 775 AMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             K +S V  R +++RD NRFHH  +G CSC DYW
Sbjct: 731 FAKRVSIVTGRELVVRDGNRFHHINSGECSCRDYW 765



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 238/465 (51%), Gaps = 9/465 (1%)

Query: 56  GQLF----EKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNY 111
           G+LF    ++M++ + F  N ++  Y +      A++ F++   ++  +WS++I  Y+  
Sbjct: 111 GKLFHNRLQRMANSNKFIDNCILKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTEE 170

Query: 112 GLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV 171
           G   EA  LF +M   G  P+      ++   +   +L  G+Q H   I+  F  N  + 
Sbjct: 171 GRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIE 230

Query: 172 TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV 231
           T + +MY KC  +  AE         KN VA T ++ GY++      A+  F  M  EGV
Sbjct: 231 TLISNMYVKCGWLDGAEVATNKMTR-KNAVACTGLMVGYTKAARNRDALLLFGKMISEGV 289

Query: 232 ESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR 291
           E + F F  IL ACAA+     G Q+H   +  G E+ V V + L+D Y KC   ++AR+
Sbjct: 290 ELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQ 349

Query: 292 LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID 351
             E     N+ SW+++I G+ + G    AL +FK + ++ + ++ F Y ++    ++  D
Sbjct: 350 AFESIHEPNDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSD 409

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
           L     +H+  +K G   Y    +A+I MY+K G +D A   F  +   D ++WT++I  
Sbjct: 410 LICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICA 469

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
            AYHG   EAL+ F +M+ SG+ P+ V    +L+AC+   +++ G+++        G + 
Sbjct: 470 HAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNP 529

Query: 472 LSVD--NSLVLVYAKCGCINDANRVFDSM-HTRDVITWTALIMGC 513
            ++D  N ++ VY++ G + +A  V  S+    DV++W +L+ GC
Sbjct: 530 -TIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGGC 573



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/395 (31%), Positives = 192/395 (48%), Gaps = 10/395 (2%)

Query: 33  VKPASDLNRALV-DFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAA-----YANSGRLREA 86
           + P S +   L+  F++   +D   Q+  ++  R GF  N  I       Y   G L  A
Sbjct: 188 ITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLI-RIGFAANISIETLISNMYVKCGWLDGA 246

Query: 87  KKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLK 146
           +   N+   KN    + L+ GY+    + +A  LF +M  EG     +    +L+ C+  
Sbjct: 247 EVATNKMTRKNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAAL 306

Query: 147 GLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTM 206
           G L  G+Q H Y IK   +    V T LVD Y KC     A   F+   +  N  +W+ +
Sbjct: 307 GDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHE-PNDFSWSAL 365

Query: 207 ITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF 266
           I GY Q+G   +A+E F+ +R +GV  N F + +I  AC+AVS    GAQ+H   +  G 
Sbjct: 366 IAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGL 425

Query: 267 EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK 326
            A +  +SA+I MY+KCG +D A +     +  + V+W ++I   A  G   EAL LFK+
Sbjct: 426 VAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKE 485

Query: 327 MHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           M    ++ +  T+  +LN C  S +     K + S+  + G        N +ID+Y++ G
Sbjct: 486 MQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAG 545

Query: 386 NLDCAFMVF-NLMQDKDVISWTSLITGCAYHGSYE 419
            L  A  V  +L  + DV+SW SL+ GC  H + E
Sbjct: 546 LLQEALEVIRSLPFEPDVMSWKSLLGGCWSHRNLE 580


>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 685

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 237/641 (36%), Positives = 369/641 (57%), Gaps = 3/641 (0%)

Query: 172 TGLVDMYAKCKCIF-EAEYLFKMFPDGK--NHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
           T LV++  K    F +  Y F +F   +  N   + T+I G+  N    + ++ F  +R 
Sbjct: 45  TFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIRK 104

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
            G+  + FTFP +L AC   S R  G  +H  ++  GF  +V   ++L+ +Y+  G L+ 
Sbjct: 105 HGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLND 164

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
           A ++ E     + V+W ++  G+   G H+EA+ LFKKM    ++ D +    VL+    
Sbjct: 165 AHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVH 224

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
             DL++ + +   + +   +   FV   L+++YAK G ++ A  VF+ M +KD+++W+++
Sbjct: 225 VGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTM 284

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
           I G A +   +E +++F  M    + PD   +   LS+CA L  L+ G+   ++  +   
Sbjct: 285 IQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEF 344

Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
            ++L + N+L+ +YAKCG +     VF  M  +D++   A I G A+NG  K +   + Q
Sbjct: 345 LTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQ 404

Query: 529 MLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSG 588
               G  PD  TF+GLL  C HAGL ++   +F ++  VY +K   +HY CM+DL GR+G
Sbjct: 405 TEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAG 464

Query: 589 KLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSN 648
            L +A  L+  M   P+A VW ALLS CR+  D +L E     L  LEP NA  YVQLSN
Sbjct: 465 MLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSN 524

Query: 649 MYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDE 708
           +YS +G+W++AA VR +M  +G++K PG SW+E    VH F+++D+ HPL   IY+K+++
Sbjct: 525 IYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIELEGTVHEFLADDKSHPLSDKIYAKLED 584

Query: 709 IMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRV 768
           +   ++  G+VP   F   +VE+E KE  L +HSEKLAVAFGL++   G  IR+ KNLRV
Sbjct: 585 LGNEMRLMGFVPTTEFVFFDVEDEEKERVLGHHSEKLAVAFGLISTDHGQVIRVVKNLRV 644

Query: 769 CGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           CGDCH  MK IS +  R I++RD+NRFH F  G+CSC DYW
Sbjct: 645 CGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 214/431 (49%), Gaps = 11/431 (2%)

Query: 89  LFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL 148
           LF+ T F N F +++LI G+ N  L  E  +LF  ++  G     +T   VL+ C+    
Sbjct: 67  LFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASN 126

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
            + G   H   +K  F+ +   +T L+ +Y+    + +A  +F+  P+ ++ V WT + +
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPE-RSVVTWTALFS 185

Query: 209 GYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEA 268
           GY+  G   +AI+ F+ M   GV  + +    +L+AC  V   D G  +   +     + 
Sbjct: 186 GYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQK 245

Query: 269 NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH 328
           N +V++ L+++YAKCG ++ AR + +     + V+W++MI G+A   F KE +  F +M 
Sbjct: 246 NSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQML 305

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD 388
             ++K D F+    L+  AS   L+  +   SLI +  F    F+ NALIDMYAK G + 
Sbjct: 306 QENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMA 365

Query: 389 CAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
             F VF  M++KD++   + I+G A +G  + +   F      GI PD      +L  C 
Sbjct: 366 RGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCV 425

Query: 449 ELTVLEFGQQVHAVFLKSGGC-----SSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-D 502
              +++ G +    F  +  C      ++     +V ++ + G ++DA R+   M  R +
Sbjct: 426 HAGLIQDGLR----FFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPN 481

Query: 503 VITWTALIMGC 513
            I W AL+ GC
Sbjct: 482 AIVWGALLSGC 492



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 183/355 (51%), Gaps = 11/355 (3%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           + D     ++++ Y+ SGRL +A K+F E P ++  TW++L  GY+  G   EA +LF +
Sbjct: 143 NHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKK 202

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M   G RP  Y +  VL  C   G L  GE    +  +     N+FV T LV++YAKC  
Sbjct: 203 MVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGK 262

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A  +F    + K+ V W+TMI GY+ N +  + IE F  M  E ++ +QF+    L+
Sbjct: 263 MEKARSVFDSMGE-KDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLS 321

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           +CA++ A D G      I    F  N+++ +ALIDMYAKCG +     + +  +  + V 
Sbjct: 322 SCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVI 381

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSL- 361
            N+ I G A+ G  K + ++F +     I  D  T+  +L  C  + +  +  +  +++ 
Sbjct: 382 MNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAIS 441

Query: 362 ---IVKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGC 412
               +K   E Y      ++D++ + G LD A+ ++ ++    + I W +L++GC
Sbjct: 442 CVYALKRTVEHY----GCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGC 492



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 121/267 (45%), Gaps = 7/267 (2%)

Query: 50  GEIDEAGQLFEKMSD----RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           G++D    + + M +    ++ F   T++  YA  G++ +A+ +F+    K+  TWS++I
Sbjct: 226 GDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMI 285

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            GY++     E  E F QM  E  +P Q+++   L  C+  G L  GE       +  F 
Sbjct: 286 QGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFL 345

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            N F+   L+DMYAKC  +     +FK   + K+ V     I+G ++NG+   +   F  
Sbjct: 346 TNLFMANALIDMYAKCGAMARGFEVFKEMKE-KDIVIMNAAISGLAKNGHVKLSFAVFGQ 404

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI-LSSGFEANVYVQSALIDMYAKCG 284
               G+  +  TF  +L  C        G +    I      +  V     ++D++ + G
Sbjct: 405 TEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAG 464

Query: 285 DLDSARRLL-EYSEIDNEVSWNSMIVG 310
            LD A RL+ +     N + W +++ G
Sbjct: 465 MLDDAYRLICDMPMRPNAIVWGALLSG 491


>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g46790, chloroplastic; AltName: Full=Protein
           CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
 gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
 gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
 gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 657

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 238/592 (40%), Positives = 359/592 (60%), Gaps = 8/592 (1%)

Query: 226 MRVEGVESN--QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
           +RV   ES+  Q T+  ++  C   S+     +VH  IL +G + + ++ + LI MY+  
Sbjct: 66  IRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDL 125

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
           G +D AR++ + +       WN++       G  +E L L+ KM+   ++ D FTY  VL
Sbjct: 126 GSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVL 185

Query: 344 N-CFASNIDLNN---AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
             C AS   +N+    K +H+ + + G+  + ++   L+DMYA+ G +D A  VF  M  
Sbjct: 186 KACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPV 245

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDM--RISGICPDHVVVSSILSACAELTVLEFGQ 457
           ++V+SW+++I   A +G   EAL+ F +M        P+ V + S+L ACA L  LE G+
Sbjct: 246 RNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGK 305

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
            +H   L+ G  S L V ++LV +Y +CG +    RVFD MH RDV++W +LI     +G
Sbjct: 306 LIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHG 365

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY 577
            GK+A+Q +++MLA G  P  +TFV +L ACSH GL E  +  FE+M + +GIKP  +HY
Sbjct: 366 YGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHY 425

Query: 578 ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEP 637
           ACM+DLLGR+ +L EA  ++  M  EP   VW +LL +CR+HG++EL ERA+  LF LEP
Sbjct: 426 ACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEP 485

Query: 638 MNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHP 697
            NA  YV L+++Y+ A  W++  RV+KL++ RG++K PG  W+E   +++ F+S D  +P
Sbjct: 486 KNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNP 545

Query: 698 LRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQG 757
           L   I++ + ++   +KE GY+P     L+ +E E KE  +  HSEKLA+AFGL+   +G
Sbjct: 546 LMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKG 605

Query: 758 APIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            PIRI KNLR+C DCH   K+IS    + I++RD NRFH FK G CSCGDYW
Sbjct: 606 EPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 193/377 (51%), Gaps = 17/377 (4%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
            + +  SD+D F    +I  Y++ G +  A+K+F++T  +  + W++L    +  G   E
Sbjct: 102 HILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEE 161

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLK----GLLQRGEQFHGYAIKTCFDLNAFVVT 172
              L+W+M   G    ++T   VL+ C         L +G++ H +  +  +  + +++T
Sbjct: 162 VLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMT 221

Query: 173 GLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
            LVDMYA+  C+  A Y+F   P  +N V+W+ MI  Y++NG  F+A+  FR+M  E  +
Sbjct: 222 TLVDMYARFGCVDYASYVFGGMPV-RNVVSWSAMIACYAKNGKAFEALRTFREMMRETKD 280

Query: 233 S--NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           S  N  T  S+L ACA+++A + G  +HG IL  G ++ + V SAL+ MY +CG L+  +
Sbjct: 281 SSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQ 340

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
           R+ +     + VSWNS+I  +   G+ K+A+ +F++M A        T+ SVL   +   
Sbjct: 341 RVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEG 400

Query: 351 DLNNAKSVHSLI-----VKTGFEGYKFVNNALIDMYAKQGNLD-CAFMVFNLMQDKDVIS 404
            +   K +   +     +K   E Y      ++D+  +   LD  A MV ++  +     
Sbjct: 401 LVEEGKRLFETMWRDHGIKPQIEHYA----CMVDLLGRANRLDEAAKMVQDMRTEPGPKV 456

Query: 405 WTSLITGCAYHGSYEEA 421
           W SL+  C  HG+ E A
Sbjct: 457 WGSLLGSCRIHGNVELA 473



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 85/376 (22%), Positives = 132/376 (35%), Gaps = 82/376 (21%)

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
           +F   S L   + ++ LNN        + +G  G K  NN LI    K+G L  A  V +
Sbjct: 18  NFLPRSPLKPPSCSVALNNPS------ISSG-AGAKISNNQLIQSLCKEGKLKQAIRVLS 70

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
                   ++  LI  C +  S  +AL+                                
Sbjct: 71  QESSPSQQTYELLILCCGHRSSLSDALR-------------------------------- 98

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
              VH   L +G      +   L+ +Y+  G ++ A +VFD    R +  W AL      
Sbjct: 99  ---VHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTL 155

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACS---------------HAGLAEN---- 556
            G G+E L  Y +M   G + D  T+  +L AC                HA L       
Sbjct: 156 AGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSS 215

Query: 557 ------------ARW-YFESMDKVYGIKPGPD--HYACMIDLLGRSGKLIEAKALLDQMV 601
                       AR+   +    V+G  P  +   ++ MI    ++GK  EA     +M+
Sbjct: 216 HVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMM 275

Query: 602 GE-----PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ-LSNMYSTAGK 655
            E     P++    ++L AC     LE G+     +      + +P +  L  MY   GK
Sbjct: 276 RETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGK 335

Query: 656 WEDAARVRKLMKSRGI 671
            E   RV   M  R +
Sbjct: 336 LEVGQRVFDRMHDRDV 351


>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 573

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 223/554 (40%), Positives = 345/554 (62%), Gaps = 1/554 (0%)

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           QVH  ++++G   ++ + + L+  YA+   +D A  L +   + +  +W+ M+ GFA+ G
Sbjct: 21  QVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAG 80

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
            H    + F+++    +  D++T P V+       DL   + +H +++K G     FV  
Sbjct: 81  DHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCA 140

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
           +L+DMYAK   ++ A  +F  M  KD+++WT +I   A   +YE +L  F  MR  G+ P
Sbjct: 141 SLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAYE-SLVLFDRMREEGVVP 199

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           D V + ++++ACA+L  +   +  +   +++G    + +  +++ +YAKCG +  A  VF
Sbjct: 200 DKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVF 259

Query: 496 DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAE 555
           D M  ++VI+W+A+I     +G+GK+A+  +  ML+    P+ +TFV LL+ACSHAGL E
Sbjct: 260 DRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIE 319

Query: 556 NARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
               +F SM + + ++P   HY CM+DLLGR+G+L EA  L++ M  E D  +W ALL A
Sbjct: 320 EGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGA 379

Query: 616 CRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEP 675
           CR+H  +EL E+AAN+L EL+P N   YV LSN+Y+ AGKWE  A+ R +M  R ++K P
Sbjct: 380 CRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKKIP 439

Query: 676 GCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKE 735
           G +W+E +++ + F   DR HP   +IY  +  ++  ++ AGYVPD +F L +VEEE K+
Sbjct: 440 GWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGYVPDTDFVLQDVEEEVKQ 499

Query: 736 IGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRF 795
             L  HSEKLA+AFGL+ +P+G PIRI KNLRVCGDCHT  K +S++  R II+RD+NRF
Sbjct: 500 EMLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVCGDCHTFSKMVSSIMRRSIIVRDANRF 559

Query: 796 HHFKAGNCSCGDYW 809
           HHF  G CSCGDYW
Sbjct: 560 HHFNDGTCSCGDYW 573



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 113/391 (28%), Positives = 190/391 (48%), Gaps = 13/391 (3%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           +D    N ++  YA    + +A  LF+    ++  TWS ++ G++  G     +  F ++
Sbjct: 33  QDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKAGDHAGCYATFREL 92

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
              G  P  YTL  V+R C  +  LQ G   H   +K     + FV   LVDMYAKC  +
Sbjct: 93  LRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVV 152

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            +A+ LF+     K+ V WT MI  Y+     ++++  F  MR EGV  ++    +++ A
Sbjct: 153 EDAQRLFERML-SKDLVTWTVMIGAYADCN-AYESLVLFDRMREEGVVPDKVAMVTVVNA 210

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           CA + A       +  I+ +GF  +V + +A+IDMYAKCG ++SAR + +  +  N +SW
Sbjct: 211 CAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISW 270

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSL-- 361
           ++MI  +   G  K+A+ LF  M +  I  +  T+ S+L  C  + +     +  +S+  
Sbjct: 271 SAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWE 330

Query: 362 --IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSY 418
              V+   + Y      ++D+  + G LD A  +   M  +KD   W++L+  C  H   
Sbjct: 331 EHAVRPDVKHY----TCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACRIHSKM 386

Query: 419 EEALKYF-SDMRISGICPDHVVVSSILSACA 448
           E A K   S + +    P H V+ S + A A
Sbjct: 387 ELAEKAANSLLELQPQNPGHYVLLSNIYAKA 417



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 137/272 (50%), Gaps = 17/272 (6%)

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           + VH+ +V  G      + N L+  YA+   +D A+ +F+ +  +D  +W+ ++ G A  
Sbjct: 20  RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKA 79

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G +      F ++   G+ PD+  +  ++  C + T L+ G+ +H V LK G  S   V 
Sbjct: 80  GDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVC 139

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
            SLV +YAKC  + DA R+F+ M ++D++TWT +I G   +    E+L  +D+M   G  
Sbjct: 140 ASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMI-GAYADCNAYESLVLFDRMREEGVV 198

Query: 536 PDYITFVGLLFACSHAGLAENARWYFE-------SMDKVYGIKPGPDHYACMIDLLGRSG 588
           PD +  V ++ AC+  G    AR+  +       S+D + G          MID+  + G
Sbjct: 199 PDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILG--------TAMIDMYAKCG 250

Query: 589 KLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
            +  A+ + D+M  E +   W A+++A   HG
Sbjct: 251 SVESAREVFDRM-KEKNVISWSAMIAAYGYHG 281



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 60/123 (48%), Gaps = 19/123 (15%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE----T 93
           L  A++D ++  G ++ A ++F++M +++  +W+ MIAAY   GR ++A  LF+      
Sbjct: 238 LGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCA 297

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRP--SQYT-----------LDNV 139
              N  T+ SL+Y  S+ GL  E    F  M  E   RP    YT           LD  
Sbjct: 298 ILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEA 357

Query: 140 LRL 142
           LRL
Sbjct: 358 LRL 360


>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 241/685 (35%), Positives = 391/685 (57%), Gaps = 52/685 (7%)

Query: 174  LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
            L+ +YAK   +  A+ LF   P  +N   WT +I+G+++ G        FR+M+ +G   
Sbjct: 330  LLTLYAKSNNMAHAQKLFDEIPQ-RNTQTWTILISGFARAGSSEMVFNLFREMQAKGACP 388

Query: 234  NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
            NQ+T  S+L  C+  +    G  VH  +L +G + +V + ++++D+Y KC   + A RL 
Sbjct: 389  NQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLF 448

Query: 294  EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI----KIDD------------- 336
            E     + VSWN MI  + R G  +++L +F+++  +D+     I D             
Sbjct: 449  ELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALE 508

Query: 337  ----------------FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDM 380
                            F+   +L    S+++L   + +H +++K GF+   F+ ++L++M
Sbjct: 509  QLYCMVECGTEFSAVTFSIALILASSLSHVEL--GRQLHGMVLKFGFDSDGFIRSSLVEM 566

Query: 381  YAKQGNLDCAFMVF-----NLMQDKD-----------VISWTSLITGCAYHGSYEEALKY 424
            Y K G +D A ++      ++++  +           ++SW S+++G  ++G YE+ LK 
Sbjct: 567  YCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKT 626

Query: 425  FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
            F  M    +  D   V++I+SACA   +LEFG+ VHA   K G      V +SL+ +Y+K
Sbjct: 627  FRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSK 686

Query: 485  CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
             G ++DA  VF   +  +++ WT++I G A +G+G  A+  +++ML +G  P+ +TF+G+
Sbjct: 687  SGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGV 746

Query: 545  LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
            L ACSHAGL E    YF  M   Y I PG +H   M+DL GR+G L + K  + +     
Sbjct: 747  LNACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISH 806

Query: 605  DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
              +VWK+ LS+CR+H ++E+G+  +  L ++ P +   YV LSNM ++  +W++AARVR 
Sbjct: 807  LTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRS 866

Query: 665  LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
            LM  RG++K+PG SW++   Q+H F+  DR HP   +IYS +D ++  +KE GY  D+  
Sbjct: 867  LMHQRGVKKQPGQSWIQLKDQIHTFVMGDRSHPQDDEIYSYLDILIGRLKEIGYSFDVKL 926

Query: 725  ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
             + +VEEE  E+ +++HSEKLAV FG++      PIRI KNLR+C DCH  +KY S +  
Sbjct: 927  VMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIRIIKNLRICTDCHNFIKYASQLLD 986

Query: 785  RHIILRDSNRFHHFKAGNCSCGDYW 809
            R II+RD +RFHHFK G+CSCGDYW
Sbjct: 987  REIIVRDIHRFHHFKHGSCSCGDYW 1011



 Score =  241 bits (616), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 162/557 (29%), Positives = 272/557 (48%), Gaps = 60/557 (10%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++  YA S  +  A+KLF+E P +N  TW+ LI G++  G     F LF +MQ +G  
Sbjct: 328 NHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGAC 387

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+QYTL +VL+ CSL   LQ G+  H + ++   D++  +   ++D+Y KCK    AE L
Sbjct: 388 PNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERL 447

Query: 191 FKMFPDG------------------------------KNHVAWTTMITGYSQNGYGFKAI 220
           F++  +G                              K+ V+W T++ G  Q GY   A+
Sbjct: 448 FELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHAL 507

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
           E    M   G E +  TF   L   +++S  + G Q+HG +L  GF+++ +++S+L++MY
Sbjct: 508 EQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMY 567

Query: 281 AKCGDLDSARRLLEYSEID----------------NEVSWNSMIVGFARQGFHKEALSLF 324
            KCG +D A  +L    +D                  VSW SM+ G+   G +++ L  F
Sbjct: 568 CKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTF 627

Query: 325 KKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
           + M    + +D  T  ++++  A+   L   + VH+ + K G     +V ++LIDMY+K 
Sbjct: 628 RLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKS 687

Query: 385 GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
           G+LD A+MVF    + +++ WTS+I+G A HG    A+  F +M   GI P+ V    +L
Sbjct: 688 GSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVL 747

Query: 445 SACAELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLVLVYAKCGCINDA-NRVFDSMHTR 501
           +AC+   ++E G + +   +K   C +  V++  S+V +Y + G +    N +F +  + 
Sbjct: 748 NACSHAGLIEEGCR-YFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISH 806

Query: 502 DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW-- 559
               W + +  C  + K  E  ++  +ML +    D   +V L   C     A N RW  
Sbjct: 807 LTSVWKSFLSSCRLH-KNVEMGKWVSEMLLQVAPSDPGAYVLLSNMC-----ASNHRWDE 860

Query: 560 --YFESMDKVYGIKPGP 574
                S+    G+K  P
Sbjct: 861 AARVRSLMHQRGVKKQP 877



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 190/403 (47%), Gaps = 42/403 (10%)

Query: 55  AGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLD 114
           A +LFE M++ D  +WN MI AY  +G + ++  +F   P+K+  +W++++ G    G +
Sbjct: 444 AERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYE 503

Query: 115 IEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
             A E  + M   G   S  T    L L S    ++ G Q HG  +K  FD + F+ + L
Sbjct: 504 RHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSL 563

Query: 175 VDMYAKCKCIFEAEYLFKMFP---------------DGKNHVAWTTMITGYSQNGYGFKA 219
           V+MY KC  + +A  + +  P                    V+W +M++GY  NG     
Sbjct: 564 VEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDG 623

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           ++ FR M  E V  +  T  +I++ACA     +FG  VH  +   G   + YV S+LIDM
Sbjct: 624 LKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDM 683

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           Y+K G LD A  +   S   N V W SMI G+A  G    A+ LF++M  + I  ++ T+
Sbjct: 684 YSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTF 743

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA------------LIDMYAKQGNL 387
             VLN  +           H+ +++ G   ++ + +A            ++D+Y + G+L
Sbjct: 744 LGVLNACS-----------HAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHL 792

Query: 388 DCA--FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
                F+  N +     + W S ++ C  H + E   K+ S+M
Sbjct: 793 TKTKNFIFKNGISHLTSV-WKSFLSSCRLHKNVEMG-KWVSEM 833



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/462 (23%), Positives = 207/462 (44%), Gaps = 56/462 (12%)

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           +H   + +G    +   + L+ +YAK  ++  A++L +     N  +W  +I GFAR G 
Sbjct: 311 LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGS 370

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
            +   +LF++M A+    + +T  SVL C + + +L   K VH+ +++ G +    + N+
Sbjct: 371 SEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNS 430

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           ++D+Y K    + A  +F LM + DV+SW  +I      G  E++L  F  +    +   
Sbjct: 431 ILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSW 490

Query: 437 HVVVSSILSA-------------------------------CAELTVLEFGQQVHAVFLK 465
           + +V  +L                                  + L+ +E G+Q+H + LK
Sbjct: 491 NTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLK 550

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDAN----------------RVFDSMHTRDVITWTAL 509
            G  S   + +SLV +Y KCG ++ A+                RV        +++W ++
Sbjct: 551 FGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSM 610

Query: 510 IMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG 569
           + G   NGK ++ L+ +  M+      D  T   ++ AC++AG+ E  R     + K+ G
Sbjct: 611 VSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKI-G 669

Query: 570 IKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAA 629
            +      + +ID+  +SG L +A  +  Q   EP+  +W +++S   +HG    G  A 
Sbjct: 670 HRIDAYVGSSLIDMYSKSGSLDDAWMVFRQS-NEPNIVMWTSMISGYALHGQ---GMHAI 725

Query: 630 NNLFELEPMNAMP----YVQLSNMYSTAGKWEDAARVRKLMK 667
               E+     +P    ++ + N  S AG  E+  R  ++MK
Sbjct: 726 GLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMK 767



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 106/202 (52%), Gaps = 6/202 (2%)

Query: 334 IDDFTYPSVL--NCFASNIDLNNAK----SVHSLIVKTGFEGYKFVNNALIDMYAKQGNL 387
           I  + YP +   +C   +  L+N+     ++H+L VK G        N L+ +YAK  N+
Sbjct: 281 ISSYFYPPLWLQSCSLYHFTLSNSPPPLGTLHALYVKNGSLQTLNPANHLLTLYAKSNNM 340

Query: 388 DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSAC 447
             A  +F+ +  ++  +WT LI+G A  GS E     F +M+  G CP+   +SS+L  C
Sbjct: 341 AHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGACPNQYTLSSVLKCC 400

Query: 448 AELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWT 507
           +    L+ G+ VHA  L++G    + + NS++ +Y KC     A R+F+ M+  DV++W 
Sbjct: 401 SLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWN 460

Query: 508 ALIMGCAQNGKGKEALQFYDQM 529
            +I    + G  +++L  + ++
Sbjct: 461 IMIGAYLRAGDVEKSLDMFRRL 482


>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 254/660 (38%), Positives = 369/660 (55%), Gaps = 38/660 (5%)

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF-RDMRVEGVESNQFTFPSILTAC 245
           A  +F   P   N  +W  +I   + +    +++  F R +       N+FTFP ++ A 
Sbjct: 192 ARKVFDQIPQ-PNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAV 250

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE--VS 303
           A       G  VHG  + + F  +V+V ++LI  YA CG LD A  + E  E +N+  VS
Sbjct: 251 AERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVS 310

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WNSM+ GF + G+  +AL LF++M    +  +  T  SV++  A  ++L   + V   I 
Sbjct: 311 WNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYID 370

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA---------- 413
           +        V NA IDM+ K G ++ A  +F+ M+ +DV+SWT++I G A          
Sbjct: 371 RNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARD 430

Query: 414 ---------------------YHGSYEEALKYFSDMRI--SGICPDHVVVSSILSACAEL 450
                                  G  +EAL  F ++++  SG  PD V + S LSACA+L
Sbjct: 431 IFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQL 490

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
             ++ G+ +H    K     + ++  SL+ +Y+K G +  A  VF S+  +DV  W+A+I
Sbjct: 491 GAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMI 550

Query: 511 MGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGI 570
            G A +G+G+ A++ +  M     KP+ +TF  LL ACSH+GL +  +  F+ M++VYG+
Sbjct: 551 AGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGV 610

Query: 571 KPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAAN 630
            P   HY+CM+D+LGR+G L EA   ++ M   P A+VW ALL AC +HG+LEL E+A +
Sbjct: 611 VPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACS 670

Query: 631 NLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFI 690
            L E+EP N   YV LSN+Y+  G WE  + +R+ M+  G++KE GCS +E +  VH FI
Sbjct: 671 RLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFI 730

Query: 691 SEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEG-KEIGLAYHSEKLAVAF 749
             D  HPL  DIY+K+DEIM  ++  GYV +    L  VEEE  KE  L  HSEK+A+AF
Sbjct: 731 VGDNAHPLSRDIYAKLDEIMARLRSHGYVANTLCMLQFVEEEEMKEKALKLHSEKMAIAF 790

Query: 750 GLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           GL+       IRI KNLRVC DCHT  K +S VY R I+LRD  RFHHF  G+CSC DYW
Sbjct: 791 GLIRADSQQAIRIVKNLRVCRDCHTVAKMVSKVYGRDIVLRDRYRFHHFSGGHCSCQDYW 850



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 134/480 (27%), Positives = 239/480 (49%), Gaps = 37/480 (7%)

Query: 75  AAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQ 133
           AA+++   L  A+K+F++ P  N ++W+ LI   +     I++  +F +M  +  + P++
Sbjct: 181 AAFSSFSALDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNK 240

Query: 134 YTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKM 193
           +T   +++  + +     G+  HG AIKT F  + FV+  L+  YA C  +  A  +F+M
Sbjct: 241 FTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEM 300

Query: 194 FP-DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
              + K+ V+W +M+TG+ Q GY  KA++ F  MR EGV  N  T  S+++ACA      
Sbjct: 301 IEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLT 360

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G +V   I  +    N+ V +A IDM+ KCG+++ AR L +  E  + VSW ++I G+A
Sbjct: 361 LGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYA 420

Query: 313 RQGFHKEALSLFKKMHARDI---------------------------------KIDDFTY 339
           +   H  A  +F  M  +DI                                 + D  T 
Sbjct: 421 KMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTL 480

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
            S L+  A    ++  + +H  I K   +  + +  +LIDMY+K G+++ A  VF+ + +
Sbjct: 481 LSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGN 540

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           KDV  W+++I G A HG  E A++ F DM+ + + P+ V  +++L AC+   +++ G+++
Sbjct: 541 KDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRL 600

Query: 460 HAVFLKSGGCSSLSVDNS-LVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMGCAQNG 517
                +  G    +   S +V V  + G + +A +  + M        W AL+  C  +G
Sbjct: 601 FDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHG 660



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 212/462 (45%), Gaps = 58/462 (12%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFN--ETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D F  N++I  YA+ G L  A  +F   E   K+  +W+S++ G+   G   +A +LF +
Sbjct: 274 DVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFER 333

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+ EG  P+  T+ +V+  C+    L  G +   Y  +    +N  V    +DM+ KC  
Sbjct: 334 MRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGE 393

Query: 184 IFEAEYLF-------------------KMFPDG-----------KNHVAWTTMITGYSQN 213
           +  A  LF                   KM   G           K+  AW  +I+GY Q+
Sbjct: 394 VEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQS 453

Query: 214 GYGFKAIECFRDMRV--EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVY 271
           G   +A+  FR++++   G   +Q T  S L+ACA + A D G  +HG I     + N  
Sbjct: 454 GRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRN 513

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD 331
           + ++LIDMY+K GD++ A  +       +   W++MI G A  G  + A+ LF  M    
Sbjct: 514 LATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQ 573

Query: 332 IKIDDFTYPSVLNCFASNIDL--------NNAKSVHSLIVKTGFEGYKFVNNALIDMYAK 383
           +K +  T+ ++L C  S+  L        +  + V+ ++ KT         + ++D+  +
Sbjct: 574 VKPNSVTFTNLL-CACSHSGLVDEGKRLFDEMERVYGVVPKTKH------YSCMVDVLGR 626

Query: 384 QGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEALKYFSDMRISGICPD----HV 438
            G+L+ A      M      S W +L+  C  HG+ E A K  S  R+  I P     +V
Sbjct: 627 AGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACS--RLLEIEPGNHGAYV 684

Query: 439 VVSSILSACAELT-VLEFGQQVHAVFL-KSGGCSSLSVDNSL 478
           ++S++ +   +   V E  QQ+    L K  GCSS+ +D ++
Sbjct: 685 LLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTV 726



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 125/252 (49%), Gaps = 4/252 (1%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           F   GE++ A  LF+ M  RD  +W T+I  YA       A+ +F+  P K+   W+ LI
Sbjct: 388 FVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLI 447

Query: 106 YGYSNYGLDIEAFELFWQMQL--EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC 163
            GY   G   EA  +F ++QL   G RP Q TL + L  C+  G +  GE  HGY  K  
Sbjct: 448 SGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKER 507

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
             LN  + T L+DMY+K   + +A  +F    + K+   W+ MI G + +G G  AIE F
Sbjct: 508 IQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGN-KDVFVWSAMIAGLAMHGRGEAAIELF 566

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAK 282
            DM+   V+ N  TF ++L AC+     D G ++   +    G        S ++D+  +
Sbjct: 567 LDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGR 626

Query: 283 CGDLDSARRLLE 294
            G L+ A + +E
Sbjct: 627 AGHLEEALKFIE 638


>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
          Length = 690

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 254/687 (36%), Positives = 390/687 (56%), Gaps = 16/687 (2%)

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
           + ++LR  +    L+ G Q H   +K  F  +  +   L+DMYAKC  +  A  +F   P
Sbjct: 7   IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 66

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGA 255
           + +N V+WT ++ G+  +G   + +  F +MR  G   N+FT  + L AC   +    G 
Sbjct: 67  E-RNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGT--RAGV 123

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           Q+HG  + +GFE +  V ++L+ MY+K      ARR+ +     N  +WNSMI G+A  G
Sbjct: 124 QIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAG 183

Query: 316 FHKEALSLFKKMHAR-DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE--GYKF 372
             +++L +F++M  R D + D+FT+ S+L   +          VH+ +   G        
Sbjct: 184 QGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAI 243

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           +  AL+D+Y K   L  A  VF+ ++ ++ I WT++I G A  G  +EA+  F     SG
Sbjct: 244 LAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG 303

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
           +  D  V+SS+++  A+  ++E G+QVH    K+     +SV NSLV +Y KCG   +A 
Sbjct: 304 VRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAG 363

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
           R F  M  R+V++WTA+I G  ++G G+EA+  +++M A G + D + ++ LL ACSH+G
Sbjct: 364 RRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSG 423

Query: 553 LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
           L +  R YF  + +   ++P  +HYACM+DLLGR+G+L EAK L+  M  EP   VW+ L
Sbjct: 424 LVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTL 483

Query: 613 LSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIR 672
           LSACRVH D+ +G    + L  ++  N + YV LSN+ + AG+W +   +R  M+ +G+R
Sbjct: 484 LSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLR 543

Query: 673 KEPGCSWVETNSQVHIFI-SEDRGHPLRTDIYSKIDEIMLLIKEA-GYVPDMNFALHNVE 730
           K+ GCSW E + +VH F    D  HP   DI   + E+   ++E  GY  D   ALH+V+
Sbjct: 544 KQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALHDVD 603

Query: 731 EEGKEIGLAYHSEKLAVAFGLLTLPQGAP--------IRIFKNLRVCGDCHTAMKYISAV 782
           EE +   L  HSE+LAV   LL    G          +R++KNLRVCGDCH  +K +SAV
Sbjct: 604 EESRVESLREHSERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSAV 663

Query: 783 YLRHIILRDSNRFHHFKAGNCSCGDYW 809
             R +++RD+NRFH F+ G CSC DYW
Sbjct: 664 VRRVVVVRDANRFHRFQNGACSCRDYW 690



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 128/381 (33%), Positives = 205/381 (53%), Gaps = 6/381 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +I  YA  G+L  A ++F+  P +N  +W++L+ G+ ++G   E   LF +M+  G  
Sbjct: 43  NNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTS 102

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+++TL   L+ C   G  + G Q HG  ++T F+ +  V   LV MY+K +   +A  +
Sbjct: 103 PNEFTLSATLKACG--GGTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRV 160

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILTACAAVS 249
           F + P  +N   W +MI+GY+  G G  ++  FR+M R    + ++FTF S+L AC+ + 
Sbjct: 161 FDVIPS-RNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLG 219

Query: 250 ARDFGAQVHGCILSSGFE--ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           A   GAQVH  +   G    +N  +  AL+D+Y KC  L  A ++ +  E  N + W ++
Sbjct: 220 AAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTV 279

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           IVG A++G  KEA+ LF++  +  ++ D     SV+  FA    +   K VH    KT  
Sbjct: 280 IVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPA 339

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
                V N+L+DMY K G    A   F  M  ++V+SWT++I G   HG   EA+  F +
Sbjct: 340 GLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEE 399

Query: 428 MRISGICPDHVVVSSILSACA 448
           M+  G+  D V   ++LSAC+
Sbjct: 400 MQAEGVEADEVAYLALLSACS 420



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 112/453 (24%), Positives = 206/453 (45%), Gaps = 41/453 (9%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +V +S      +A ++F+ +  R+  TWN+MI+ YA++G+ R++  +F E   ++  
Sbjct: 142 NSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRH-- 199

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH-GY 158
                                         +P ++T  ++L+ CS  G  + G Q H   
Sbjct: 200 ----------------------------DEQPDEFTFASLLKACSGLGAAREGAQVHAAM 231

Query: 159 AIKTCFDL-NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
           A++      NA +   L+D+Y KC  +  A  +F    + +N + WTT+I G++Q G   
Sbjct: 232 AVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGL-ERRNAIQWTTVIVGHAQEGQVK 290

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           +A+  FR     GV ++     S++   A  +  + G QVH     +    +V V ++L+
Sbjct: 291 EAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLV 350

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
           DMY KCG    A R        N VSW +MI G  + G  +EA+ LF++M A  ++ D+ 
Sbjct: 351 DMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEV 410

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA-LIDMYAKQGNL-DCAFMVFN 395
            Y ++L+  + +  ++  +   S I +      K  + A ++D+  + G L +   ++ +
Sbjct: 411 AYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILS 470

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSD--MRISGICP-DHVVVSSILSACAELTV 452
           +  +  V  W +L++ C  H       +   D  + + G  P ++V++S+IL+   E   
Sbjct: 471 MPMEPTVGVWQTLLSACRVHKDVAVG-REVGDVLLAVDGDNPVNYVMLSNILAEAGEWRE 529

Query: 453 LE--FGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            +   G        K GGCS   VD  +   Y 
Sbjct: 530 CQGIRGAMRRKGLRKQGGCSWTEVDKEVHFFYG 562



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 67/110 (60%)

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
           +++ +L A A  + L  G Q+HA  +K G  S   ++N+L+ +YAKCG ++ A  VFD M
Sbjct: 6   MIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGM 65

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
             R+V++WTAL++G   +G+ +E L+ + +M   GT P+  T    L AC
Sbjct: 66  PERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKAC 115


>gi|223948379|gb|ACN28273.1| unknown [Zea mays]
          Length = 648

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 243/649 (37%), Positives = 378/649 (58%), Gaps = 17/649 (2%)

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQ 235
           MY KC  +  A  +F    D +N V+WT ++ G+ ++G     +    +MR       N+
Sbjct: 1   MYVKCGELDLACEVFGGMRD-RNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNE 59

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
           +T  + L AC  V     G  +HG  + +G++ +  V S+L+ +Y+K G +  ARR+ + 
Sbjct: 60  YTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDG 119

Query: 296 SEIDNEV-SWNSMIVGFARQGFHKEALSLFKKM--HARDIKIDDFTYPSVLNCFASNIDL 352
           + + + + +WN+M+ G+A  G  ++AL +F++M  H    + D+FT+ S+L   +     
Sbjct: 120 AGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGAT 179

Query: 353 NNAKSVHSLIVKTGFE--GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
                VH+ +  +GF       +  AL+DMY K   L  A  VF  ++ K+VI WT+++ 
Sbjct: 180 REGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVV 239

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
           G A  G   EAL+ F     SG  PD  V+SS++   A+  ++E G+QVH   +K    +
Sbjct: 240 GHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGT 299

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
            +S  NS+V +Y KCG  ++A R+F  M   +V++WT ++ G  ++G G+EA+  +++M 
Sbjct: 300 DVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMR 359

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKL 590
           A G +PD +T++ LL ACSHAGL +  R YF  + +   ++P  +HYACM+DLLGR+G+L
Sbjct: 360 AGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGEL 419

Query: 591 IEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMY 650
            EA+ L+  M  EP   VW+ LLSACRVH D+ +G  A + L  ++  N + YV LSN+ 
Sbjct: 420 REARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVL 479

Query: 651 STAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFI---SEDRGHPLRTDIYSKID 707
           + AG+W +  +VR  M+ RG++K+ GCSWVE   +VH F     E+  HP   DI   + 
Sbjct: 480 AEAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLR 539

Query: 708 EIMLLIKEA-GY-VPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLT-----LPQGAPI 760
           ++   ++E  GY   D  FALH+V+EE +   L  HSE+LAV   LL         G PI
Sbjct: 540 DMETRMREQLGYNADDARFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGHGEPI 599

Query: 761 RIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           R++KNLRVCGDCH   K +SAV  R +++RD+NRFH F+ G+CSC DYW
Sbjct: 600 RVYKNLRVCGDCHEFFKGLSAVVRRALVVRDANRFHRFEHGSCSCKDYW 648



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 135/478 (28%), Positives = 231/478 (48%), Gaps = 9/478 (1%)

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYT 135
           Y   G L  A ++F     +N  +W++L+ G+  +G       L  +M+      P++YT
Sbjct: 2   YVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYT 61

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
           L   L+ C + G    G   HG  ++  +  +  V + LV +Y+K   I +A  +F    
Sbjct: 62  LSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAG 121

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV-EGV-ESNQFTFPSILTACAAVSARDF 253
            G     W  M++GY+  G+G  A+  FR+MR  EG  + ++FTF S+L AC+ + A   
Sbjct: 122 LGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATRE 181

Query: 254 GAQVHGCILSSGFE--ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
           GAQVH  + +SGF   +N  +  AL+DMY KC  L  A ++ E  E  N + W +++VG 
Sbjct: 182 GAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGH 241

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
           A++G   EAL LF++      + D     SV+   A    +   + VH   +K       
Sbjct: 242 AQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDV 301

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
              N+++DMY K G  D A  +F  M+  +V+SWT+++ G   HG   EA+  F +MR  
Sbjct: 302 SAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAG 361

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LVLVYAKCGCIND 490
           G+ PD V   ++LSAC+   +++  ++  +   +       +   + +V +  + G + +
Sbjct: 362 GVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELRE 421

Query: 491 ANRVFDSMHTRDVI-TWTALIMGCAQNGKGKEALQFYDQMLAR-GTKP-DYITFVGLL 545
           A  +  +M     +  W  L+  C  +       +  D +LA  G  P +Y+T   +L
Sbjct: 422 ARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVL 479



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 123/484 (25%), Positives = 211/484 (43%), Gaps = 71/484 (14%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGF-TWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSL 104
           +S  G I +A ++F+      G  TWN M++ YA++G  R+A  +F E            
Sbjct: 104 YSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHGRDALLVFRE------------ 151

Query: 105 IYGYSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC 163
                               + EG ++P ++T  ++L+ CS  G  + G Q H     + 
Sbjct: 152 ------------------MRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASG 193

Query: 164 FDL--NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIE 221
           F    NA +   LVDMY KC+ +  A  +F+   + KN + WT ++ G++Q G   +A+E
Sbjct: 194 FSTASNAILAGALVDMYVKCRRLPVAMQVFERL-ERKNVIQWTAVVVGHAQEGQVTEALE 252

Query: 222 CFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYA 281
            FR     G   +     S++   A  +  + G QVH   +      +V   ++++DMY 
Sbjct: 253 LFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYL 312

Query: 282 KCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPS 341
           KCG  D A R+       N VSW +M+ G  + G  +EA++LF++M A  ++ D+ TY +
Sbjct: 313 KCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLA 372

Query: 342 VLNCFASNIDLNNAKSVHSLI-----VKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFN 395
           +L+  +    ++  +   S I     V+   E Y      ++D+  + G L  A  ++  
Sbjct: 373 LLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYA----CMVDLLGRAGELREARDLIRT 428

Query: 396 LMQDKDVISWTSLITGCAYHGSY---EEALKYFSDMRISGICP-DHVVVSSILSACAELT 451
           +  +  V  W +L++ C  H       EA      + + G  P ++V +S++L+   E  
Sbjct: 429 MPMEPTVGVWQTLLSACRVHKDVAVGREAGDVL--LAMDGDNPVNYVTLSNVLAEAGEW- 485

Query: 452 VLEFGQQVHAV--------FLKSGGCSSLSVDNSLVLVYAKCG------CINDANRVFDS 497
                ++ H V          K GGCS + V   +   Y   G         D  RV   
Sbjct: 486 -----RECHKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRD 540

Query: 498 MHTR 501
           M TR
Sbjct: 541 METR 544


>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Glycine max]
          Length = 775

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 250/691 (36%), Positives = 383/691 (55%), Gaps = 12/691 (1%)

Query: 41  RALVDFSNSGEIDEAGQLFEKMSDRDGFT----WNTMIAAYANSGRLREAKKLFNETPFK 96
           RALV  +   ++ +   L  ++     F+     N++I  YA      +A  +F+    K
Sbjct: 15  RALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNK 74

Query: 97  NFFTWSSLIYGYSN---YGLDIEAFELFWQMQL--EGYRPSQYTLDNVLRLCSLKGLLQR 151
           +  +W+ LI  +S    +   +    LF Q+ +  +   P+ +TL  V    S     + 
Sbjct: 75  DVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRA 134

Query: 152 GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYS 211
           G Q H  A+KT    + F  + L++MY K   +FEA  LF   P+ +N V+W TMI+GY+
Sbjct: 135 GRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPE-RNAVSWATMISGYA 193

Query: 212 QNGYGFKAIECFRDMRVE--GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
                 +A E F+ MR E  G   N+F F S+L+A       + G QVH   + +G    
Sbjct: 194 SQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCI 253

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA 329
           V V +AL+ MY KCG L+ A +  E S   N ++W++M+ GFA+ G   +AL LF  MH 
Sbjct: 254 VSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQ 313

Query: 330 RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDC 389
                 +FT   V+N  +    +   + +H   +K G+E   +V +AL+DMYAK G++  
Sbjct: 314 SGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVD 373

Query: 390 AFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE 449
           A   F  +Q  DV+ WTS+ITG   +G YE AL  +  M++ G+ P+ + ++S+L AC+ 
Sbjct: 374 ARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSN 433

Query: 450 LTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTAL 509
           L  L+ G+Q+HA  +K      + + ++L  +YAKCG ++D  R+F  M  RDVI+W A+
Sbjct: 434 LAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAM 493

Query: 510 IMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG 569
           I G +QNG+G E L+ +++M   GTKPD +TFV LL ACSH GL +    YF+ M   + 
Sbjct: 494 ISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMFDEFN 553

Query: 570 IKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAA 629
           I P  +HYACM+D+L R+GKL EAK  ++    +    +W+ LL+A + H D +LG  A 
Sbjct: 554 IAPTVEHYACMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDYDLGAYAG 613

Query: 630 NNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIF 689
             L EL  + +  YV LS++Y+  GKWED  RVR +MK+RG+ KEPGCSW+E  S  H+F
Sbjct: 614 EKLMELGSLESSAYVLLSSIYTALGKWEDVERVRGMMKARGVTKEPGCSWIELKSLTHVF 673

Query: 690 ISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
           +  D  HP   +I   +  +  L+K+ GY P
Sbjct: 674 VVGDNMHPQIDEIRLGLKLLTKLMKDEGYQP 704



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 165/331 (49%), Gaps = 39/331 (11%)

Query: 19  IIGPARYTHNVG--NSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIA 75
           ++   R  H++   N +     +  ALV  +   G +++A + FE   +++  TW+ M+ 
Sbjct: 234 LVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVT 293

Query: 76  AYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYT 135
                                          G++ +G   +A +LF+ M   G  PS++T
Sbjct: 294 -------------------------------GFAQFGDSDKALKLFYDMHQSGELPSEFT 322

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF- 194
           L  V+  CS    +  G Q HGY++K  ++L  +V++ LVDMYAKC  I +A   F+   
Sbjct: 323 LVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGFECIQ 382

Query: 195 -PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDF 253
            PD    V WT++ITGY QNG    A+  +  M++ GV  N  T  S+L AC+ ++A D 
Sbjct: 383 QPDV---VLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQ 439

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           G Q+H  I+   F   + + SAL  MYAKCG LD   R+       + +SWN+MI G ++
Sbjct: 440 GKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQ 499

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
            G   E L LF+KM     K D+ T+ ++L+
Sbjct: 500 NGRGNEGLELFEKMCLEGTKPDNVTFVNLLS 530



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 22/217 (10%)

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           M +  +   H+ V   L  C     L  G+ +HA  L +G  SS  + NSL+ +YAKC  
Sbjct: 1   MPLLPLSHQHLQVLRALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSH 60

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ----FYDQMLARGT-KPDYITFV 542
            + AN VFDS++ +DV++W  LI   +Q      +L     F   ++A  T  P+  T  
Sbjct: 61  FSKANLVFDSINNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLT 120

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDH----YACMIDLLGRSGKLIEAKALLD 598
           G+  A S    +   R           +K    H     + ++++  ++G + EA+ L D
Sbjct: 121 GVFTAASTLSDSRAGR-----QAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFD 175

Query: 599 QMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
           +M  E +A  W  ++S    +   EL + A    FEL
Sbjct: 176 EM-PERNAVSWATMISG---YASQELADEA----FEL 204


>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 239/582 (41%), Positives = 355/582 (60%), Gaps = 6/582 (1%)

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
            Q TF  ++ +CA  ++  +G  VH C++ SGF+ + ++ + LI+MY + G +D A ++ 
Sbjct: 77  TQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKVF 136

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNID- 351
           + +       WN++    A  G  KE L L+ +M+      D FTY  VL  C  S +  
Sbjct: 137 DETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELSV 196

Query: 352 --LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
             L   K +H+ I++ G+E    V   L+D+YAK G++  A  VF  M  K+ +SW+++I
Sbjct: 197 CPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMI 256

Query: 410 TGCAYHGSYEEALKYFSDMRISGI--CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG 467
              A +    +AL+ F  M        P+ V + ++L ACA L  LE G+ +H   L+  
Sbjct: 257 ACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRRQ 316

Query: 468 GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYD 527
             S L V N+L+ +Y +CG +    RVFD+M  RDV++W +LI     +G GK+A+Q ++
Sbjct: 317 LDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFE 376

Query: 528 QMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRS 587
            M+ +G  P YI+F+ +L ACSHAGL E  +  FESM   Y I PG +HYACM+DLLGR+
Sbjct: 377 NMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRA 436

Query: 588 GKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLS 647
            +L EA  L++ M  EP  TVW +LL +CR+H ++EL ERA+  LFELEP NA  YV L+
Sbjct: 437 NRLGEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTVLFELEPRNAGNYVLLA 496

Query: 648 NMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKID 707
           ++Y+ A  W +A  V KL+++RG++K PGCSW+E   +V+ F+S D  +P   +I++ + 
Sbjct: 497 DIYAEAKLWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQIEEIHALLV 556

Query: 708 EIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLR 767
           ++   +K  GYVP  N  L++++EE KE  +  HSEKLAVAFGL+   +G  IRI KNLR
Sbjct: 557 KLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTAKGETIRIRKNLR 616

Query: 768 VCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +C DCH   K+IS    R I++RD NRFHHF+ G CSCGDYW
Sbjct: 617 LCEDCHAVTKFISKFANREILVRDVNRFHHFRDGVCSCGDYW 658



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 194/403 (48%), Gaps = 32/403 (7%)

Query: 31  NSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF 90
           NS+    D++R LVD   SG             D+D F    +I  Y   G +  A K+F
Sbjct: 92  NSLSYGLDVHRCLVD---SG------------FDQDPFLATKLINMYYELGSIDRALKVF 136

Query: 91  NETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL-- 148
           +ET  +  + W++L    +  G   E  +L+ QM   G    ++T   VL+ C +  L  
Sbjct: 137 DETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELSV 196

Query: 149 --LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTM 206
             L++G++ H + ++  ++ N  V+T L+D+YAK   +  A  +F   P  KN V+W+ M
Sbjct: 197 CPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPT-KNFVSWSAM 255

Query: 207 ITGYSQNGYGFKAIECFRDMRVEGVES--NQFTFPSILTACAAVSARDFGAQVHGCILSS 264
           I  +++N    KA+E F+ M  E   S  N  T  ++L ACA ++A + G  +HG IL  
Sbjct: 256 IACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGYILRR 315

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLF 324
             ++ + V +ALI MY +CG++   +R+ +  +  + VSWNS+I  +   GF K+A+ +F
Sbjct: 316 QLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIF 375

Query: 325 KKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVK----TGFEGYKFVNNALID 379
           + M  + +     ++ +VL  C  + +         S++ K     G E Y      ++D
Sbjct: 376 ENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYA----CMVD 431

Query: 380 MYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEA 421
           +  +   L  A  +   M  +     W SL+  C  H + E A
Sbjct: 432 LLGRANRLGEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELA 474



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 52/114 (45%)

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           P       ++ +CA+   L +G  VH   + SG      +   L+ +Y + G I+ A +V
Sbjct: 76  PTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKV 135

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
           FD    R +  W AL    A  G GKE L  Y QM   GT  D  T+  +L AC
Sbjct: 136 FDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKAC 189


>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 745

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 260/725 (35%), Positives = 399/725 (55%), Gaps = 28/725 (3%)

Query: 90  FNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL-EGYRPSQYTLDNVLRLCSLKGL 148
           F+++ F     ++ LI  Y+N  L   +F  +  M+  +      + L ++L+ C+    
Sbjct: 44  FSQSHFTPEANYNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASS 103

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
              G + HG+A K  F  + FV   L++MY KC C+  A  +F   P+ ++ V+WTTM+ 
Sbjct: 104 GDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPE-RDVVSWTTMLG 162

Query: 209 GYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFE 267
            Y ++    +A+   R+M+  GV+ +     S++     +     G  VHG I+ + G E
Sbjct: 163 CYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDE 222

Query: 268 A-NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK 326
              V + +ALIDMY K G L SA+RL +     + VSW  MI G  R     E    F +
Sbjct: 223 KMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNR 282

Query: 327 MHARDIKIDDFTYPSVLN-C-FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
           M    +  ++ T  S++  C F   +DL   K  H+ +++ GF     +  ALIDMY K 
Sbjct: 283 MLEEKLFPNEITLLSLITECGFVGTLDL--GKWFHAYLLRNGFGMSLALVTALIDMYGKC 340

Query: 385 GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
           G +  A  +FN ++ KDV  W+ LI+  A+    ++    F +M  + + P++V + S+L
Sbjct: 341 GQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLL 400

Query: 445 SACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVI 504
           S CAE   L+ G+  HA   + G    + ++ +L+ +YAKCG +  A  +F+    RD+ 
Sbjct: 401 SLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIR 460

Query: 505 TWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESM 564
            W  ++ G + +G GKEAL+ + +M + G +P+ ITFV +  ACSH+GL E         
Sbjct: 461 MWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGLME--------- 511

Query: 565 DKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLEL 624
                      HY C++DLLGR+G L EA  +++ M   P+  +W ALL+AC++H +L L
Sbjct: 512 -----------HYGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLAL 560

Query: 625 GERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNS 684
           GE AA  + EL+P N    V  SN+Y++A +W D   VR+ M   G++KEPG SW+E + 
Sbjct: 561 GEVAARKILELDPQNCGYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSG 620

Query: 685 QVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEK 744
            VH F S D+     T +Y  + E+ + ++E+GY P+    L N++EE KE  L+YHSEK
Sbjct: 621 SVHHFKSGDKACTQTTKVYEMVTEMCIKLRESGYTPNTAAVLLNIDEEEKESALSYHSEK 680

Query: 745 LAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCS 804
           LA AFGL++   G PIRI KNLR+C DCH A K +S +Y R II+RD NRFHHF  G CS
Sbjct: 681 LATAFGLISTAPGTPIRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCS 740

Query: 805 CGDYW 809
           C  YW
Sbjct: 741 CMGYW 745



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 221/451 (49%), Gaps = 23/451 (5%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N ++  Y   G L  A+ +F++ P ++  +W++++  Y       EA  L  +MQ
Sbjct: 122 DVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQ 181

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD--LNAFVVTGLVDMYAKCKC 183
             G + S   L +++ +      ++ G   HGY ++   D  +   + T L+DMY K  C
Sbjct: 182 FVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGC 241

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +  A+ LF      ++ V+WT MI G  ++    +  + F  M  E +  N+ T  S++T
Sbjct: 242 LASAQRLFDRLSK-RSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLIT 300

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
            C  V   D G   H  +L +GF  ++ + +ALIDMY KCG +  AR L    +  +   
Sbjct: 301 ECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKI 360

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           W+ +I  +A      +  +LF +M   D+K ++ T  S+L+  A    L+  K  H+ I 
Sbjct: 361 WSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYIN 420

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           + G E    +  ALI+MYAK G++  A  +FN    +D+  W +++ G + HG  +EAL+
Sbjct: 421 RHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALE 480

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            FS+M   G+ P+ +   SI  AC+           H+  ++  GC        LV +  
Sbjct: 481 LFSEMESHGVEPNDITFVSIFHACS-----------HSGLMEHYGC--------LVDLLG 521

Query: 484 KCGCINDANRVFDSMHTR-DVITWTALIMGC 513
           + G +++A+ + ++M  R + I W AL+  C
Sbjct: 522 RAGHLDEAHNIIENMPMRPNTIIWGALLAAC 552



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/391 (28%), Positives = 177/391 (45%), Gaps = 56/391 (14%)

Query: 28  NVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREA 86
           NVG+  K    +  AL+D +   G +  A +LF+++S R   +W  MIA    S RL E 
Sbjct: 218 NVGDE-KMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEG 276

Query: 87  KKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLK 146
            K FN    +  F                               P++ TL +++  C   
Sbjct: 277 AKNFNRMLEEKLF-------------------------------PNEITLLSLITECGFV 305

Query: 147 GLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTM 206
           G L  G+ FH Y ++  F ++  +VT L+DMY KC  +  A  LF      K+   W+ +
Sbjct: 306 GTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKK-KDVKIWSVL 364

Query: 207 ITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF 266
           I+ Y+      +    F +M    V+ N  T  S+L+ CA   A D G   H  I   G 
Sbjct: 365 ISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGL 424

Query: 267 EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK 326
           E +V +++ALI+MYAKCGD+  AR L   +   +   WN+M+ GF+  G  KEAL LF +
Sbjct: 425 EVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSE 484

Query: 327 MHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           M +  ++ +D T+ S+ + C  S +                 E Y      L+D+  + G
Sbjct: 485 MESHGVEPNDITFVSIFHACSHSGL----------------MEHY----GCLVDLLGRAG 524

Query: 386 NLDCAF-MVFNLMQDKDVISWTSLITGCAYH 415
           +LD A  ++ N+    + I W +L+  C  H
Sbjct: 525 HLDEAHNIIENMPMRPNTIIWGALLAACKLH 555



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 151/326 (46%), Gaps = 37/326 (11%)

Query: 54  EAGQLFEKMSDRDGFTWN-----TMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY 108
           + G+ F     R+GF  +      +I  Y   G++  A+ LFN    K+   WS LI  Y
Sbjct: 309 DLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAY 368

Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA 168
           ++     + F LF +M     +P+  T+ ++L LC+  G L  G+  H Y  +   +++ 
Sbjct: 369 AHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDV 428

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFK--MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
            + T L++MYAKC  +  A  LF   M  D +    W TM+ G+S +G G +A+E F +M
Sbjct: 429 ILETALINMYAKCGDVTIARSLFNEAMQRDIR---MWNTMMAGFSMHGCGKEALELFSEM 485

Query: 227 RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDL 286
              GVE N  TF SI  AC+     +     +GC               L+D+  + G L
Sbjct: 486 ESHGVEPNDITFVSIFHACSHSGLMEH----YGC---------------LVDLLGRAGHL 526

Query: 287 DSARRLLEYSEI-DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP-SVL- 343
           D A  ++E   +  N + W +++   A    HK  L+L +    + +++D      SVL 
Sbjct: 527 DEAHNIIENMPMRPNTIIWGALL---AACKLHKN-LALGEVAARKILELDPQNCGYSVLK 582

Query: 344 -NCFASNIDLNNAKSVHSLIVKTGFE 368
            N +AS    N+  SV   +  +G +
Sbjct: 583 SNIYASAKRWNDVTSVREAMSHSGMK 608


>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
 gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
 gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
 gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 691

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 234/605 (38%), Positives = 351/605 (58%), Gaps = 32/605 (5%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           T+ +++  C+   A + G +VH  I +SGF   + + + L+ MYAKCG L  AR++ +  
Sbjct: 87  TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM 146

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD-----------IKIDDFTYPSVL-- 343
              +  SWN M+ G+A  G  +EA  LF +M  +D           +K D      VL  
Sbjct: 147 PNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYS 206

Query: 344 ----------NCFASNID---------LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
                     N F  +I          +   K +H  IV+ G +  + + ++L+DMY K 
Sbjct: 207 LMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKC 266

Query: 385 GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
           G +D A  +F+ + +KDV+SWTS+I        + E    FS++  S   P+    + +L
Sbjct: 267 GCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVL 326

Query: 445 SACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVI 504
           +ACA+LT  E G+QVH    + G        +SLV +Y KCG I  A  V D     D++
Sbjct: 327 NACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLV 386

Query: 505 TWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESM 564
           +WT+LI GCAQNG+  EAL+++D +L  GTKPD++TFV +L AC+HAGL E    +F S+
Sbjct: 387 SWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSI 446

Query: 565 DKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLEL 624
            + + +    DHY C++DLL RSG+  + K+++ +M  +P   +W ++L  C  +G+++L
Sbjct: 447 TEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDL 506

Query: 625 GERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNS 684
            E AA  LF++EP N + YV ++N+Y+ AGKWE+  ++RK M+  G+ K PG SW E   
Sbjct: 507 AEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKR 566

Query: 685 QVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEK 744
           + H+FI+ D  HP+   I   + E+   +KE GYVP  +  LH+VE+E KE  L YHSEK
Sbjct: 567 KRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEK 626

Query: 745 LAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCS 804
           LAVAF +L+  +G  I++FKNLR C DCH A+K+IS +  R I +RDS RFH F+ G CS
Sbjct: 627 LAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCS 686

Query: 805 CGDYW 809
           CGDYW
Sbjct: 687 CGDYW 691



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 204/385 (52%), Gaps = 4/385 (1%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           NR L  ++  G + +A ++F++M +RD  +WN M+  YA  G L EA+KLF+E   K+ +
Sbjct: 124 NRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSY 183

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQ-LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
           +W++++ GY       EA  L+  MQ +   RP+ +T+   +   +    ++RG++ HG+
Sbjct: 184 SWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGH 243

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFK 218
            ++   D +  + + L+DMY KC CI EA  +F    + K+ V+WT+MI  Y ++    +
Sbjct: 244 IVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVE-KDVVSWTSMIDRYFKSSRWRE 302

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID 278
               F ++       N++TF  +L ACA ++  + G QVHG +   GF+   +  S+L+D
Sbjct: 303 GFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVD 362

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
           MY KCG+++SA+ +++     + VSW S+I G A+ G   EAL  F  +     K D  T
Sbjct: 363 MYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVT 422

Query: 339 YPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           + +VL+ C  + +     +  +S+  K            L+D+ A+ G  +    V + M
Sbjct: 423 FVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEM 482

Query: 398 QDK-DVISWTSLITGCAYHGSYEEA 421
             K     W S++ GC+ +G+ + A
Sbjct: 483 PMKPSKFLWASVLGGCSTYGNIDLA 507



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 142/510 (27%), Positives = 235/510 (46%), Gaps = 68/510 (13%)

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           Q+     +P   T  N++++CS    L+ G++ H +   + F     +   L+ MYAKC 
Sbjct: 75  QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134

Query: 183 CIFEAEYLFKMFPD------------------------------GKNHVAWTTMITGYSQ 212
            + +A  +F   P+                               K+  +WT M+TGY +
Sbjct: 135 SLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVK 194

Query: 213 NGYGFKAIECFRDM-RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVY 271
                +A+  +  M RV     N FT    + A AAV     G ++HG I+ +G +++  
Sbjct: 195 KDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEV 254

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD 331
           + S+L+DMY KCG +D AR + +     + VSW SMI  + +    +E  SLF ++    
Sbjct: 255 LWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSC 314

Query: 332 IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
            + +++T+  VLN  A        K VH  + + GF+ Y F +++L+DMY K GN++ A 
Sbjct: 315 ERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAK 374

Query: 392 MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELT 451
            V +     D++SWTSLI GCA +G  +EALKYF  +  SG  PDHV   ++LSAC    
Sbjct: 375 HVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAG 434

Query: 452 VLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIM 511
           ++E G                     L   Y+    I + +R+    HT D   +T L+ 
Sbjct: 435 LVEKG---------------------LEFFYS----ITEKHRL---SHTSD--HYTCLVD 464

Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIK 571
             A++G+ ++      +M     KP    +  +L  CS  G  + A    E+  +++ I+
Sbjct: 465 LLARSGRFEQLKSVISEM---PMKPSKFLWASVLGGCSTYGNIDLAE---EAAQELFKIE 518

Query: 572 P-GPDHYACMIDLLGRSGKLIEAKALLDQM 600
           P  P  Y  M ++   +GK  E   +  +M
Sbjct: 519 PENPVTYVTMANIYAAAGKWEEEGKMRKRM 548



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 142/298 (47%), Gaps = 10/298 (3%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G +     D D   W++++  Y   G + EA+ +F++   K+  +W+S+I  Y       
Sbjct: 242 GHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWR 301

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           E F LF ++     RP++YT   VL  C+     + G+Q HGY  +  FD  +F  + LV
Sbjct: 302 EGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLV 361

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMY KC  I  A+++    P   + V+WT++I G +QNG   +A++ F  +   G + + 
Sbjct: 362 DMYTKCGNIESAKHVVDGCPK-PDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDH 420

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ-SALIDMYAKCGDLDSARRLL- 293
            TF ++L+AC      + G +    I      ++     + L+D+ A+ G  +  + ++ 
Sbjct: 421 VTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVIS 480

Query: 294 EYSEIDNEVSWNSMIVGFARQG---FHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
           E     ++  W S++ G +  G     +EA     K+       +  TY ++ N +A+
Sbjct: 481 EMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPE----NPVTYVTMANIYAA 534



 Score = 43.5 bits (101), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 32/149 (21%), Positives = 66/149 (44%), Gaps = 5/149 (3%)

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA 578
           G++ L+   Q+L R  KP   T+  L+  CS     E  +   E + +  G  PG   + 
Sbjct: 66  GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHI-RTSGFVPGIVIWN 124

Query: 579 CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM 638
            ++ +  + G L++A+ + D+M    D   W  +++    + ++ L E A     E+   
Sbjct: 125 RLLRMYAKCGSLVDARKVFDEMPNR-DLCSWNVMVNG---YAEVGLLEEARKLFDEMTEK 180

Query: 639 NAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
           ++  +  +   Y    + E+A  +  LM+
Sbjct: 181 DSYSWTAMVTGYVKKDQPEEALVLYSLMQ 209


>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g08820
 gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
 gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
 gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 685

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 237/641 (36%), Positives = 369/641 (57%), Gaps = 3/641 (0%)

Query: 172 TGLVDMYAKCKCIF-EAEYLFKMFPDGK--NHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
           T LV++  K    F + +Y + +F   +  N   + ++I G+  N    + ++ F  +R 
Sbjct: 45  TFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRK 104

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
            G+  + FTFP +L AC   S+R  G  +H  ++  GF  +V   ++L+ +Y+  G L+ 
Sbjct: 105 HGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLND 164

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
           A +L +     + V+W ++  G+   G H+EA+ LFKKM    +K D +    VL+    
Sbjct: 165 AHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVH 224

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
             DL++ + +   + +   +   FV   L+++YAK G ++ A  VF+ M +KD+++W+++
Sbjct: 225 VGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTM 284

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
           I G A +   +E ++ F  M    + PD   +   LS+CA L  L+ G+   ++  +   
Sbjct: 285 IQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEF 344

Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
            ++L + N+L+ +YAKCG +     VF  M  +D++   A I G A+NG  K +   + Q
Sbjct: 345 LTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQ 404

Query: 529 MLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSG 588
               G  PD  TF+GLL  C HAGL ++   +F ++  VY +K   +HY CM+DL GR+G
Sbjct: 405 TEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAG 464

Query: 589 KLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSN 648
            L +A  L+  M   P+A VW ALLS CR+  D +L E     L  LEP NA  YVQLSN
Sbjct: 465 MLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSN 524

Query: 649 MYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDE 708
           +YS  G+W++AA VR +M  +G++K PG SW+E   +VH F+++D+ HPL   IY+K+++
Sbjct: 525 IYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLED 584

Query: 709 IMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRV 768
           +   ++  G+VP   F   +VEEE KE  L YHSEKLAVA GL++   G  IR+ KNLRV
Sbjct: 585 LGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRV 644

Query: 769 CGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           CGDCH  MK IS +  R I++RD+NRFH F  G+CSC DYW
Sbjct: 645 CGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 216/431 (50%), Gaps = 11/431 (2%)

Query: 89  LFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL 148
           LF+ T F N F ++SLI G+ N  L  E  +LF  ++  G     +T   VL+ C+    
Sbjct: 67  LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
            + G   H   +K  F+ +   +T L+ +Y+    + +A  LF   PD ++ V WT + +
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPD-RSVVTWTALFS 185

Query: 209 GYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEA 268
           GY+ +G   +AI+ F+ M   GV+ + +    +L+AC  V   D G  +   +     + 
Sbjct: 186 GYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQK 245

Query: 269 NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH 328
           N +V++ L+++YAKCG ++ AR + +     + V+W++MI G+A   F KE + LF +M 
Sbjct: 246 NSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQML 305

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD 388
             ++K D F+    L+  AS   L+  +   SLI +  F    F+ NALIDMYAK G + 
Sbjct: 306 QENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMA 365

Query: 389 CAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
             F VF  M++KD++   + I+G A +G  + +   F      GI PD      +L  C 
Sbjct: 366 RGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCV 425

Query: 449 ELTVLEFGQQVHAVFLKSGGC-----SSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-D 502
              +++ G +    F  +  C      ++     +V ++ + G ++DA R+   M  R +
Sbjct: 426 HAGLIQDGLR----FFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPN 481

Query: 503 VITWTALIMGC 513
            I W AL+ GC
Sbjct: 482 AIVWGALLSGC 492



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 184/355 (51%), Gaps = 11/355 (3%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           + D     ++++ Y+ SGRL +A KLF+E P ++  TW++L  GY+  G   EA +LF +
Sbjct: 143 NHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKK 202

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M   G +P  Y +  VL  C   G L  GE    Y  +     N+FV T LV++YAKC  
Sbjct: 203 MVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGK 262

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A  +F    + K+ V W+TMI GY+ N +  + IE F  M  E ++ +QF+    L+
Sbjct: 263 MEKARSVFDSMVE-KDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLS 321

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           +CA++ A D G      I    F  N+++ +ALIDMYAKCG +     + +  +  + V 
Sbjct: 322 SCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVI 381

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSL- 361
            N+ I G A+ G  K + ++F +     I  D  T+  +L  C  + +  +  +  +++ 
Sbjct: 382 MNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAIS 441

Query: 362 ---IVKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGC 412
               +K   E Y      ++D++ + G LD A+ ++ ++    + I W +L++GC
Sbjct: 442 CVYALKRTVEHY----GCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGC 492



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 122/267 (45%), Gaps = 7/267 (2%)

Query: 50  GEIDEAGQLFEKMSD----RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           G++D    + + M +    ++ F   T++  YA  G++ +A+ +F+    K+  TWS++I
Sbjct: 226 GDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMI 285

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            GY++     E  ELF QM  E  +P Q+++   L  C+  G L  GE       +  F 
Sbjct: 286 QGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFL 345

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            N F+   L+DMYAKC  +     +FK   + K+ V     I+G ++NG+   +   F  
Sbjct: 346 TNLFMANALIDMYAKCGAMARGFEVFKEMKE-KDIVIMNAAISGLAKNGHVKLSFAVFGQ 404

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI-LSSGFEANVYVQSALIDMYAKCG 284
               G+  +  TF  +L  C        G +    I      +  V     ++D++ + G
Sbjct: 405 TEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAG 464

Query: 285 DLDSARRLL-EYSEIDNEVSWNSMIVG 310
            LD A RL+ +     N + W +++ G
Sbjct: 465 MLDDAYRLICDMPMRPNAIVWGALLSG 491


>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 231/560 (41%), Positives = 340/560 (60%), Gaps = 9/560 (1%)

Query: 256 QVHGCILSSGFEA-----NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
           Q+H   +  G        N ++  AL+ + A    +  A ++    +  N  +WN+MI G
Sbjct: 53  QIHAFSIRHGVPPQNPDFNKHLIFALVSLSAP---MSFAAQIFNQIQAPNIFTWNTMIRG 109

Query: 311 FARQGFHKEALSLFKKMHA-RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           FA       A+ LF +MHA   I  D  T+P +    A  +D++  + +HS++V+ GF+ 
Sbjct: 110 FAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDS 169

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
            +FV N+L+ MY+  G  + A+ VF +M  +D ++W S+I G A +G   EAL  + +M 
Sbjct: 170 LRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMG 229

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
             G+ PD   + S+LSAC EL  L  G++VH   +K G   +    N+L+ +Y+KCG   
Sbjct: 230 SEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFR 289

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
           DA +VFD M  R V++WT+LI+G A NG G EAL+ + ++  +G KP  ITFVG+L+ACS
Sbjct: 290 DAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACS 349

Query: 550 HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
           H G+ +    YF  M + YGI P  +H+ CM+DLL R+GK+ +A   +  M   P+A +W
Sbjct: 350 HCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIW 409

Query: 610 KALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
           + LL AC +HG LELGE A   +  LE  ++  +V LSN+Y++  +W D   VRK+M  +
Sbjct: 410 RTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMK 469

Query: 670 GIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNV 729
           G++K PG S VE  ++V+ FI  DR HP   + Y+ + +I  L+K  GYVP     L ++
Sbjct: 470 GVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLADI 529

Query: 730 EEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIIL 789
           EEE KE  L++H+EK+A+AF L+  P G PIRI KNLRVC DCH A+K IS V+ R II+
Sbjct: 530 EEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFEREIIV 589

Query: 790 RDSNRFHHFKAGNCSCGDYW 809
           RD +RFHHFK G+CSC DYW
Sbjct: 590 RDRSRFHHFKDGSCSCKDYW 609



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 193/393 (49%), Gaps = 13/393 (3%)

Query: 134 YTLDNVLRLCSLKGLLQ-RGEQFHGYAIKTCF-----DLNAFVVTGLVDMYAKCKCIFEA 187
           + L   + L  L G  Q + +Q H ++I+        D N  ++  LV + A     F A
Sbjct: 32  FILRKCISLVQLCGSSQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMS--FAA 89

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV-EGVESNQFTFPSILTACA 246
           +   ++     N   W TMI G++++     A+E F  M     +  +  TFP +  A A
Sbjct: 90  QIFNQI--QAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVA 147

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            +     G  +H  ++ +GF++  +VQ++L+ MY+  G  +SA ++ E     + V+WNS
Sbjct: 148 KLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNS 207

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           +I GFA  G   EAL+L+++M +  ++ D FT  S+L+       L   + VH  +VK G
Sbjct: 208 VINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVG 267

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
               +  +NAL+D+Y+K GN   A  VF+ M+++ V+SWTSLI G A +G   EALK F 
Sbjct: 268 LVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFG 327

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFG-QQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
           ++   G+ P  +    +L AC+   +L+ G      +  + G    +     +V +  + 
Sbjct: 328 ELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRA 387

Query: 486 GCINDANRVFDSMHT-RDVITWTALIMGCAQNG 517
           G + DA     +M    + + W  L+  C  +G
Sbjct: 388 GKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHG 420



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 176/361 (48%), Gaps = 16/361 (4%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ-L 126
           F  + + A  + S  +  A ++FN+    N FTW+++I G++       A ELF QM   
Sbjct: 70  FNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQMHAA 129

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
               P  +T   + +  +    +  GE  H   ++  FD   FV   LV MY+       
Sbjct: 130 SSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAES 189

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A  +F++    ++ VAW ++I G++ NG   +A+  +R+M  EGVE + FT  S+L+AC 
Sbjct: 190 AYQVFEIM-SYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACV 248

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            + A   G +VH  ++  G   N +  +AL+D+Y+KCG+   A+++ +  E  + VSW S
Sbjct: 249 ELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTS 308

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL----NCFASNIDLN---NAKSVH 359
           +IVG A  G   EAL LF ++  + +K  + T+  VL    +C   +   N     K  +
Sbjct: 309 LIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEY 368

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSY 418
            ++ +    G       ++D+  + G +  A+  + N+    + + W +L+  C  HG  
Sbjct: 369 GILPRIEHHG------CMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHL 422

Query: 419 E 419
           E
Sbjct: 423 E 423



 Score = 45.8 bits (107), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 73/176 (41%), Gaps = 33/176 (18%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           AL+D +S  G   +A ++F++M +R   +W ++I   A +G                   
Sbjct: 277 ALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNG------------------- 317

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
                       L  EA +LF +++ +G +PS+ T   VL  CS  G+L  G  +     
Sbjct: 318 ------------LGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMK 365

Query: 161 KTCFDLNAFVVTG-LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGY 215
           +    L      G +VD+  +   + +A    +  P   N V W T++   + +G+
Sbjct: 366 EEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGH 421


>gi|297733830|emb|CBI15077.3| unnamed protein product [Vitis vinifera]
          Length = 804

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 275/747 (36%), Positives = 417/747 (55%), Gaps = 45/747 (6%)

Query: 73  MIAAYANSGRLREAKKLFNETP-FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRP 131
           +I +Y     L  A+ +F++ P       W+ +I  YS      E+  LF QM   G RP
Sbjct: 93  LIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHG-RP 151

Query: 132 S---QYTLDNVLRLCSLKGLLQ-RGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           +   +YT   V   CS    L+  GE  HG  +K  ++ + FV   LV+MY+    + +A
Sbjct: 152 TSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDA 211

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGF-KAIECFRDMRV-EGVESNQFTFPSILTAC 245
           + +F   P  ++ + WT+++ GY+  G  + +A++CF DM   + V+ N+    SIL+AC
Sbjct: 212 KRVFDEMPQ-RDVITWTSVVKGYAMRGEFYNEALQCFNDMLCHDEVKPNEAVLVSILSAC 270

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A + A D G  +H  I  +    +  + +ALIDMYAKCG +D ARR+ +     + ++W 
Sbjct: 271 AHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRDLLTWT 330

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           SMI G +  G   E L  F +M A   K DD T   VLN   S+  L   + VH ++VK+
Sbjct: 331 SMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNG-CSHSGLVEEEIVHGMVVKS 389

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA-LKY 424
           GFE   +V N++I+M +    ++ A  VFN M ++DV SWTSL+ G A HG  + A L +
Sbjct: 390 GFESNLYVGNSVINMCSVFARMEDARKVFNQMSERDVFSWTSLLGGYAKHGEMDRASLTF 449

Query: 425 FSDMRISG-ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
           F +M     + P+  V+  +LSACA L  L+ G  +H    K G   S ++  +L+ +YA
Sbjct: 450 FCNMLCDDRVNPNEAVLVCVLSACAHLGALDQGNWIHLYIDKIGIRQSSNISTALIDMYA 509

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG I+ A+RVF+ +  RDV+++T++I G + +G GK+AL        RG+         
Sbjct: 510 KCGRIDCASRVFNGICKRDVLSFTSMISGLSYHGLGKDAL--------RGSS-------- 553

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
                              +M+ ++GI P  +HY C IDLLGR+G L  A  ++  M  E
Sbjct: 554 ----------------ILANMESLWGIAPKIEHYGCYIDLLGRAGYLERALEVVKTMPME 597

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP-YVQLSNMYSTAGKWEDAARV 662
           PD  +W+ALLSA R+H ++ LGE+  +++ +L+  +     V LSN+Y++ G+WE    +
Sbjct: 598 PDIVIWRALLSASRIHHNVNLGEQIISHIGQLKSSDHNGGEVLLSNLYASLGRWERVTEM 657

Query: 663 RKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDM 722
           RKLM  R     PGCSW+E N  VH F   D+ HP   +I +K++EI+  + + GY  + 
Sbjct: 658 RKLMVDRRSESSPGCSWIEVNGLVHEFRVADQLHPQIVEIRNKLNEILKRLSQIGYSANT 717

Query: 723 NFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAV 782
                ++ EE KE  +A+HSEKLA+AFGL++   G  IRI KNLR C DCH+A+K IS V
Sbjct: 718 MQVSFDLNEEEKEQAVAWHSEKLAIAFGLMSTEPGTLIRIVKNLRTCEDCHSALKTISQV 777

Query: 783 YLRHIILRDSNRFHHFKAGNCSCGDYW 809
           Y R I++RD +RFH F  G+CSC D+W
Sbjct: 778 YGREIVVRDRSRFHTFIEGDCSCKDFW 804



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 164/587 (27%), Positives = 292/587 (49%), Gaps = 34/587 (5%)

Query: 98  FFTWSSLIYGYSNYGLDI------EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQR 151
           F+  S L+Y  SN    I       +F L          PS  T   +L+    +  L +
Sbjct: 24  FYVQSPLVYISSNTSSAIWEPSGTSSFSL----------PSHSTFVQLLKK---RPSLTQ 70

Query: 152 GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYS 211
            +Q H   +      N  ++  L+  Y  C+ +  A  +F  FP     + W  MI  YS
Sbjct: 71  IKQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLMIQAYS 130

Query: 212 QNGYGFKAIECFRDMRVEG--VESNQFTFPSILTACAA-VSARDFGAQVHGCILSSGFEA 268
           +     +++  F  M   G    ++++TF  + TAC+   + R +G  VHG ++  G+E+
Sbjct: 131 KTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYES 190

Query: 269 NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG-FHKEALSLFKKM 327
           +++V ++L++MY+    +  A+R+ +     + ++W S++ G+A +G F+ EAL  F  M
Sbjct: 191 DIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGEFYNEALQCFNDM 250

Query: 328 HARD-IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
              D +K ++    S+L+  A    L+  K +H  I K        ++ ALIDMYAK G 
Sbjct: 251 LCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGR 310

Query: 387 LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSA 446
           +DCA  VF+ +  +D+++WTS+I+G + HG   E L  FS+M   G  PD + +  +L+ 
Sbjct: 311 IDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNG 370

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITW 506
           C+   ++E  + VH + +KSG  S+L V NS++ + +    + DA +VF+ M  RDV +W
Sbjct: 371 CSHSGLVE-EEIVHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSERDVFSW 429

Query: 507 TALIMGCAQNGK-GKEALQFYDQMLARG-TKPDYITFVGLLFACSHAGLAENARWYFESM 564
           T+L+ G A++G+  + +L F+  ML      P+    V +L AC+H G  +   W    +
Sbjct: 430 TSLLGGYAKHGEMDRASLTFFCNMLCDDRVNPNEAVLVCVLSACAHLGALDQGNWIHLYI 489

Query: 565 DKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLEL 624
           DK+ GI+   +    +ID+  + G+ I+  + +   + + D   + +++S    HG  + 
Sbjct: 490 DKI-GIRQSSNISTALIDMYAKCGR-IDCASRVFNGICKRDVLSFTSMISGLSYHGLGKD 547

Query: 625 GERAANNLFELEPMNAM-PYVQLSNMY----STAGKWEDAARVRKLM 666
             R ++ L  +E +  + P ++    Y      AG  E A  V K M
Sbjct: 548 ALRGSSILANMESLWGIAPKIEHYGCYIDLLGRAGYLERALEVVKTM 594



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 120/375 (32%), Positives = 206/375 (54%), Gaps = 12/375 (3%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYG-LD 114
           G + +   + D F  N+++  Y+   R+ +AK++F+E P ++  TW+S++ GY+  G   
Sbjct: 181 GMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGEFY 240

Query: 115 IEAFELFWQMQL-EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG 173
            EA + F  M   +  +P++  L ++L  C+  G L +G+  H Y  K    L++ + T 
Sbjct: 241 NEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTA 300

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG 230
           L+DMYAKC  I  A  +F    DG   ++ + WT+MI+G S +G G + +  F +M  EG
Sbjct: 301 LIDMYAKCGRIDCARRVF----DGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEG 356

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
            + +  T   +L  C+  S       VHG ++ SGFE+N+YV +++I+M +    ++ AR
Sbjct: 357 FKPDDITLLGVLNGCSH-SGLVEEEIVHGMVVKSGFESNLYVGNSVINMCSVFARMEDAR 415

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQG-FHKEALSLFKKMHARD-IKIDDFTYPSVLNCFAS 348
           ++       +  SW S++ G+A+ G   + +L+ F  M   D +  ++     VL+  A 
Sbjct: 416 KVFNQMSERDVFSWTSLLGGYAKHGEMDRASLTFFCNMLCDDRVNPNEAVLVCVLSACAH 475

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
              L+    +H  I K G      ++ ALIDMYAK G +DCA  VFN +  +DV+S+TS+
Sbjct: 476 LGALDQGNWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDCASRVFNGICKRDVLSFTSM 535

Query: 409 ITGCAYHGSYEEALK 423
           I+G +YHG  ++AL+
Sbjct: 536 ISGLSYHGLGKDALR 550



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 177/389 (45%), Gaps = 68/389 (17%)

Query: 31  NSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKL 89
           N +  +S+++ AL+D ++  G ID A ++F+ +  RD  TW +MI+              
Sbjct: 289 NRILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMIS-------------- 334

Query: 90  FNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLL 149
                            G S +GL  E    F +M  EG++P   TL  VL  CS  GL+
Sbjct: 335 -----------------GLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLV 377

Query: 150 QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
           +  E  HG  +K+ F+ N +V   +++M +    + +A  +F    + ++  +WT+++ G
Sbjct: 378 EE-EIVHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSE-RDVFSWTSLLGG 435

Query: 210 YSQNGYGFKA-IECFRDMRVEG-VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFE 267
           Y+++G   +A +  F +M  +  V  N+     +L+ACA + A D G  +H  I   G  
Sbjct: 436 YAKHGEMDRASLTFFCNMLCDDRVNPNEAVLVCVLSACAHLGALDQGNWIHLYIDKIGIR 495

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM 327
            +  + +ALIDMYAKCG +D A R+       + +S+ SMI G +  G  K+AL      
Sbjct: 496 QSSNISTALIDMYAKCGRIDCASRVFNGICKRDVLSFTSMISGLSYHGLGKDALR----- 550

Query: 328 HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL 387
                               S+I L N +S+  +  K    G        ID+  + G L
Sbjct: 551 -------------------GSSI-LANMESLWGIAPKIEHYG------CYIDLLGRAGYL 584

Query: 388 DCAFMVFNLM-QDKDVISWTSLITGCAYH 415
           + A  V   M  + D++ W +L++    H
Sbjct: 585 ERALEVVKTMPMEPDIVIWRALLSASRIH 613


>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
 gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
          Length = 837

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 240/657 (36%), Positives = 387/657 (58%), Gaps = 2/657 (0%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
            D +   +++  YA  G + +A+ +F+    K   TW+++I GY+  G    + +LF  M
Sbjct: 175 EDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLM 234

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
                 P +Y L ++L  CS+ G L+ G+Q H Y +++   ++      L+D Y KC  +
Sbjct: 235 MESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRV 294

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
              + LF    D KN ++WTTMI GY QN Y ++A+E   +M   G + +++   S+LT+
Sbjct: 295 KAGKALFDRL-DVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTS 353

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C +V A   G Q+H  ++    E + +V +ALIDMY+KC  LD A+R+ +     + V +
Sbjct: 354 CGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYY 413

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N+MI G++RQG+   AL +F++M  + +     T+ S+L   A+ + L  +K +H LI+K
Sbjct: 414 NAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIK 473

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            GF   KF ++ALID+Y+K   +  A  VF    +KD++ W SL +G       EEA K 
Sbjct: 474 YGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKL 533

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           +SD+++S   P+    +++ +A + L  L  GQQ H   +K G  S   + N+LV +YAK
Sbjct: 534 YSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAK 593

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG + +A ++F S   +D   W ++I   AQ+GK +EAL+ ++ M++    P+Y+TFV +
Sbjct: 594 CGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSV 653

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L ACSH G  E+   ++ SM + YGI+PG +HYA ++ LLGR+G+L EA+  +++M   P
Sbjct: 654 LSACSHVGFVEDGLQHYNSMAR-YGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMTIRP 712

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
            A VW++LLSACRV G++EL + AA     ++PM++  YV LSN++++ G W D  R+R 
Sbjct: 713 AALVWRSLLSACRVFGNVELAKHAAEMAISIDPMDSGSYVMLSNIFASKGMWGDVKRLRL 772

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPD 721
            M   G+ KEPG SW+E N +VHIF+S D+ H     IY  +DE+   +K+ G V D
Sbjct: 773 KMDVNGVVKEPGQSWIEVNGEVHIFVSRDKVHDETDLIYLALDELTTQMKDVGCVHD 829



 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 182/618 (29%), Positives = 307/618 (49%), Gaps = 17/618 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N ++ +Y   G + +A  LF++ P +N  +WSS++  Y+  G + +A   F + Q
Sbjct: 74  DVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQ 133

Query: 126 LEGY-RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
                + ++Y L +++R C  +   + G Q H Y IK+ F  + +V T LV +YAK   I
Sbjct: 134 RTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEI 193

Query: 185 FEAEYLFKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
            +A  +F    DG   K  V WT +ITGY+++G    +++ F  M    V  +++   SI
Sbjct: 194 DKARLVF----DGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSI 249

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           L AC+ +     G Q+H  +L S  + +V   + LID Y KCG + + + L +  ++ N 
Sbjct: 250 LNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNI 309

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           +SW +MI G+ +  +  EA+ L  +M     K D++   SVL    S   L + + +HS 
Sbjct: 310 ISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSY 369

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           ++K   E   FV NALIDMY+K   LD A  VF+++    V+ + ++I G +  G    A
Sbjct: 370 VIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGA 429

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           L+ F +MR+  + P  +   S+L   A L  L+  +Q+H + +K G        ++L+ V
Sbjct: 430 LEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDV 489

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           Y+KC CI DA  VF+    +D++ W +L  G     K +EA + Y  +     +P+  TF
Sbjct: 490 YSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFTF 549

Query: 542 VGLLFACS-HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
             L  A S  A L    +++ + M    G++  P     ++D+  + G + EA+ +    
Sbjct: 550 AALTTAASILASLPHGQQFHNQVMK--MGLESDPFITNALVDMYAKCGSVEEAEKIFSSS 607

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFE--LEPMNAMPYVQLSNMYSTAGKWED 658
           V + D   W +++S    HG +E   R    +    + P N + +V + +  S  G  ED
Sbjct: 608 VWK-DTACWNSMISMYAQHGKVEEALRMFETMVSNNINP-NYVTFVSVLSACSHVGFVED 665

Query: 659 AARVRKLMKSRGIRKEPG 676
             +    M   GI  EPG
Sbjct: 666 GLQHYNSMARYGI--EPG 681



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 144/474 (30%), Positives = 236/474 (49%), Gaps = 34/474 (7%)

Query: 42  ALVDF-SNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
            L+DF +  G +     LF+++  ++  +W TMIA Y                  +N + 
Sbjct: 283 VLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGY-----------------MQNSYD 325

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
           W              EA EL  +M   G++P +Y   +VL  C     LQ G Q H Y I
Sbjct: 326 W--------------EAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVI 371

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAI 220
           K C + + FV   L+DMY+KC  + +A+ +F +     + V +  MI GYS+ GY   A+
Sbjct: 372 KVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVT-CHSVVYYNAMIEGYSRQGYLCGAL 430

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
           E F++MR++ V  +  TF S+L   AA+       Q+HG I+  GF  + +  SALID+Y
Sbjct: 431 EVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVY 490

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
           +KC  +  AR + E +   + V WNS+  G+  Q   +EA  L+  +     + ++FT+ 
Sbjct: 491 SKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFTFA 550

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
           ++    +    L + +  H+ ++K G E   F+ NAL+DMYAK G+++ A  +F+    K
Sbjct: 551 ALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSSSVWK 610

Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
           D   W S+I+  A HG  EEAL+ F  M  + I P++V   S+LSAC+ +  +E G Q +
Sbjct: 611 DTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSVLSACSHVGFVEDGLQHY 670

Query: 461 AVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD-VITWTALIMGC 513
               + G    +    S+V +  + G + +A    + M  R   + W +L+  C
Sbjct: 671 NSMARYGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMTIRPAALVWRSLLSAC 724



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 210/393 (53%), Gaps = 18/393 (4%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           + D F  N +I  Y+    L +AK++F+     +   ++++I GYS  G    A E+F +
Sbjct: 376 EHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQE 435

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+L+   PS  T  ++L L +    LQ  +Q HG  IK  F L+ F  + L+D+Y+KC C
Sbjct: 436 MRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSC 495

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I +A Y+F+   + K+ V W ++ +GY+      +A + + D+++     N+FTF ++ T
Sbjct: 496 IRDARYVFEGTTN-KDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFTFAALTT 554

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           A + +++   G Q H  ++  G E++ ++ +AL+DMYAKCG ++ A ++   S   +   
Sbjct: 555 AASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSSSVWKDTAC 614

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC-----FASNIDLNNAKSV 358
           WNSMI  +A+ G  +EAL +F+ M + +I  +  T+ SVL+      F  +  L +  S+
Sbjct: 615 WNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSVLSACSHVGFVED-GLQHYNSM 673

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD-VISWTSLITGCAYHGS 417
               ++ G E Y     +++ +  + G L  A      M  +   + W SL++ C   G+
Sbjct: 674 ARYGIEPGIEHYA----SVVTLLGRAGRLTEAREFIEKMTIRPAALVWRSLLSACRVFGN 729

Query: 418 YEEALKYFSDMRISGICP----DHVVVSSILSA 446
            E A K+ ++M IS I P     +V++S+I ++
Sbjct: 730 VELA-KHAAEMAIS-IDPMDSGSYVMLSNIFAS 760



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 179/348 (51%), Gaps = 10/348 (2%)

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           +VH  ++  G + +V++ + L+  Y K G +  A  L +     N VSW+S++  + + G
Sbjct: 61  KVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLG 120

Query: 316 FHKEALSLFKKMHARDI-KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
           ++++AL  F +     + K++++   S++              VHS ++K+GF    +V 
Sbjct: 121 YNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVG 180

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
            +L+ +YAK G +D A +VF+ +  K  ++WT++ITG    G  E +L+ F+ M  S + 
Sbjct: 181 TSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVI 240

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           PD  V+SSIL+AC+ L  L+ G+Q+HA  L+S     +S  N L+  Y KCG +     +
Sbjct: 241 PDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKAL 300

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
           FD +  +++I+WT +I G  QN    EA++   +M   G KPD      +L +C      
Sbjct: 301 FDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDAL 360

Query: 555 ENARWYFESMDKVYGIKPGPDH----YACMIDLLGRSGKLIEAKALLD 598
           ++ R         Y IK   +H       +ID+  +   L +AK + D
Sbjct: 361 QHGRQIHS-----YVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFD 403



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 144/281 (51%), Gaps = 6/281 (2%)

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYA 382
           +     ++++K+      ++L    SN  +   + VH  +V  G +   F++N L+  Y 
Sbjct: 27  MLPSFSSQNVKVKGRALANLLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYF 86

Query: 383 KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV---V 439
           K G++  A  +F+ M +++++SW+S+++     G  E+AL YF  +     C D +   +
Sbjct: 87  KIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYF--LEFQRTCVDKLNEYI 144

Query: 440 VSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH 499
           ++SI+ AC +    E G QVH+  +KSG    + V  SLV++YAK G I+ A  VFD + 
Sbjct: 145 LASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLV 204

Query: 500 TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW 559
            +  +TWTA+I G  ++G+ + +LQ ++ M+     PD      +L ACS  G  +  + 
Sbjct: 205 LKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQ 264

Query: 560 YFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
               + +    K     Y  +ID   + G++   KAL D++
Sbjct: 265 IHAYVLRS-ETKMDVSTYNVLIDFYTKCGRVKAGKALFDRL 304



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 9/124 (7%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF------N 91
           +  ALVD ++  G ++EA ++F     +D   WN+MI+ YA  G++ EA ++F      N
Sbjct: 583 ITNALVDMYAKCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNN 642

Query: 92  ETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQR 151
             P  N+ T+ S++   S+ G   +  + +  M   G  P      +V+ L    G L  
Sbjct: 643 INP--NYVTFVSVLSACSHVGFVEDGLQHYNSMARYGIEPGIEHYASVVTLLGRAGRLTE 700

Query: 152 GEQF 155
             +F
Sbjct: 701 AREF 704


>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 235/585 (40%), Positives = 356/585 (60%), Gaps = 5/585 (0%)

Query: 227  RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDL 286
            R++  ES   T  S       +S      + H  I + G + +  + +    MY     +
Sbjct: 710  RIKATESKYKTIGSA-PGTDTISCFSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRI 768

Query: 287  DSARRLLEYSEIDNEVS--WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
            D+A  + E  +I N  S  WN MI GFA  G    +L L+ KM  + +K D F +P  L 
Sbjct: 769  DAASIVFE--DIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALK 826

Query: 345  CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
              A   DL   K +H  +V  G     FV+ AL+DMYAK G+++ A +VF+ M  +D++S
Sbjct: 827  SCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVS 886

Query: 405  WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
            WTS+I+G A++G   E L +F  MR SG+ P+ V + S+L AC  L  L  G+  H+  +
Sbjct: 887  WTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVI 946

Query: 465  KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ 524
            ++G    + V  +++ +Y+KCG ++ A  +FD    +D++ W+A+I     +G G++A+ 
Sbjct: 947  QTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAID 1006

Query: 525  FYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLL 584
             +DQM+  G +P ++TF  +L ACSH+GL E  + YF+ M + + I     +YACM+DLL
Sbjct: 1007 LFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLL 1066

Query: 585  GRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYV 644
            GR+G+L EA  L++ M  EPDA++W +LL ACR+H +L+L E+ A++LF L+P++A  +V
Sbjct: 1067 GRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHV 1126

Query: 645  QLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYS 704
             LSN+Y+   +W +  +VRK+M  RG  K  G S VE ++QVH F   DR HP    +Y+
Sbjct: 1127 LLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYA 1186

Query: 705  KIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFK 764
            K++E+   +K  GYVP  +F LH++EEE KE  L+YHSE+LA+AFGL+    G  +RI K
Sbjct: 1187 KLEELAAPMKHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITK 1246

Query: 765  NLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            NLR+CGDCH A+K IS +  R I++RD +RFH F+ G CSCGDYW
Sbjct: 1247 NLRICGDCHNAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGDYW 1291



 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 239/678 (35%), Positives = 381/678 (56%), Gaps = 9/678 (1%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
           Q+F+     D F    + + YA    L+ A+K+F+ETP  N   W+S +  Y       E
Sbjct: 26  QVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQWEE 85

Query: 117 AFELFWQMQ-LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC-FDLNAFVVTGL 174
              LF  M    G  P  +T+   L+ C+   +L+ G+  HG+A K      + FV + L
Sbjct: 86  TLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSAL 145

Query: 175 VDMYAKCKCIFEAEYLFKMF--PDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGV 231
           V++Y+KC  + EA  +F+ F  PD    V WT+M+TGY QN    +A+  F  M  ++ V
Sbjct: 146 VELYSKCGQMGEALKVFEEFQRPDT---VLWTSMVTGYQQNNDPEEALALFSQMVMMDCV 202

Query: 232 ESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR 291
             +  T  S+++ACA +     G+ VHG ++   F+ ++ + ++L+++YAK G    A  
Sbjct: 203 VLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAAN 262

Query: 292 LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID 351
           L       + +SW++MI  +A      EAL+LF +M  +  + +  T  S L   A + +
Sbjct: 263 LFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRN 322

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
           L   K +H + V  GFE    V+ ALIDMY K    D A  +F  +  KDV+SW +L++G
Sbjct: 323 LEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSG 382

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
            A +G   +++  F +M   GI PD V V  IL+A +EL + +    +H   ++SG  S+
Sbjct: 383 YAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSN 442

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
           + V  SL+ +Y+KCG + DA ++F  M  RDV+ W+++I     +G+G EAL+ +DQM+ 
Sbjct: 443 VFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVK 502

Query: 532 RGT-KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKL 590
             T +P+ +TF+ +L ACSHAGL E     F+ M   Y ++P  +H+  M+DLLGR G+L
Sbjct: 503 NSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQL 562

Query: 591 IEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMY 650
            +A  ++++M       VW ALL ACR+H ++E+GE AA NLF L+P +A  Y+ LSN+Y
Sbjct: 563 GKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIY 622

Query: 651 STAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIM 710
           +  GKW++ A +R  +K RG++K  G S VE    VH F++ DR HP    IY  + ++ 
Sbjct: 623 AVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRKLE 682

Query: 711 LLIKEAGYVPDMNFALHN 728
             + +  Y+PD++F LH+
Sbjct: 683 AQMGKEVYIPDLDFLLHD 700



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 151/520 (29%), Positives = 264/520 (50%), Gaps = 20/520 (3%)

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQN 213
           Q H    KT    + F  T L  +YAKC  +  A  +F   P    H+ W + +  Y + 
Sbjct: 22  QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHL-WNSTLRSYCRE 80

Query: 214 GYGFKAIECFRDMRVEGVES-NQFTFPSILTACAAVSARDFGAQVHG-CILSSGFEANVY 271
               + +  F  M     E+ + FT P  L ACA +   + G  +HG    +    ++++
Sbjct: 81  KQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMF 140

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD 331
           V SAL+++Y+KCG +  A ++ E  +  + V W SM+ G+ +    +EAL+LF +M   D
Sbjct: 141 VGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMD 200

Query: 332 -IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
            + +D  T  SV++  A  +++     VH L+++  F+G   + N+L+++YAK G    A
Sbjct: 201 CVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIA 260

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
             +F+ M +KDVISW+++I   A + +  EAL  F +M      P+ V V S L ACA  
Sbjct: 261 ANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVS 320

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
             LE G+++H + +  G     SV  +L+ +Y KC C ++A  +F  +  +DV++W AL+
Sbjct: 321 RNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALL 380

Query: 511 MGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGI 570
            G AQNG   +++  +  ML+ G +PD +  V +L A S  G+ + A          Y +
Sbjct: 381 SGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHG-----YVV 435

Query: 571 KPGPDHY----ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGD----L 622
           + G +      A +I+L  + G L +A  L   M+   D  +W ++++A  +HG     L
Sbjct: 436 RSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVR-DVVIWSSMIAAYGIHGRGGEAL 494

Query: 623 ELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
           E+ ++   N   + P N + ++ + +  S AG  E+  ++
Sbjct: 495 EIFDQMVKN-STVRP-NNVTFLSILSACSHAGLVEEGLKI 532



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 194/371 (52%), Gaps = 12/371 (3%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G +  +  D D    N+++  YA +G  + A  LF++ P K+  +WS++I  Y+N     
Sbjct: 230 GLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAAN 289

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  LF +M  + + P+  T+ + L+ C++   L+ G++ H  A+   F+L+  V T L+
Sbjct: 290 EALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALI 349

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMY KC C  EA  LF+  P  K+ V+W  +++GY+QNG  +K++  FR+M  +G++ + 
Sbjct: 350 DMYMKCSCPDEAVDLFQRLPK-KDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDA 408

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
                IL A + +        +HG ++ SGF +NV+V ++LI++Y+KCG L  A +L + 
Sbjct: 409 VAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKG 468

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKM-HARDIKIDDFTYPSVLN-CFASNIDLN 353
             + + V W+SMI  +   G   EAL +F +M     ++ ++ T+ S+L+ C  + +   
Sbjct: 469 MIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEE 528

Query: 354 NAK----SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSL 408
             K     VH   ++   E +      ++D+  + G L  A  + N M        W +L
Sbjct: 529 GLKIFDRMVHDYQLRPDSEHFGI----MVDLLGRIGQLGKAMDIINRMPIPAGPHVWGAL 584

Query: 409 ITGCAYHGSYE 419
           +  C  H + E
Sbjct: 585 LGACRIHHNIE 595



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 183/346 (52%), Gaps = 3/346 (0%)

Query: 170  VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
            ++T    MY     I  A  +F+  P+  + + W  MI G++ +G    ++E +  M  +
Sbjct: 754  ILTKFAIMYVSFNRIDAASIVFEDIPNPCSFL-WNVMIRGFATDGRFLSSLELYSKMMEK 812

Query: 230  GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
            G++ ++F FP  L +CA +S    G  +H  ++  G   +++V +AL+DMYAKCGD+++A
Sbjct: 813  GLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAA 872

Query: 290  RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
            R + +   + + VSW SMI G+A  G++ E L  F  M +  +  +  +  SVL    + 
Sbjct: 873  RLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNL 932

Query: 350  IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
              L   +  HS +++TGFE    V  A++DMY+K G+LD A  +F+    KD++ W+++I
Sbjct: 933  GALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMI 992

Query: 410  TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
                 HG   +A+  F  M  +G+ P HV  + +LSAC+   +LE G+    +  +    
Sbjct: 993  ASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVI 1052

Query: 470  S-SLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
            +  LS    +V +  + G +++A  + ++M    D   W +L+  C
Sbjct: 1053 ARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGAC 1098



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 178/349 (51%), Gaps = 3/349 (0%)

Query: 77   YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
            Y +  R+  A  +F + P    F W+ +I G++  G  + + EL+ +M  +G +P ++  
Sbjct: 762  YVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAF 821

Query: 137  DNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD 196
               L+ C+    LQRG+  H + +      + FV   LVDMYAKC  I  A  +F     
Sbjct: 822  PFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMA- 880

Query: 197  GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
             ++ V+WT+MI+GY+ NGY  + +  F  MR  GV  N+ +  S+L AC  + A   G  
Sbjct: 881  VRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEW 940

Query: 257  VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
             H  ++ +GFE ++ V +A++DMY+KCG LD AR L + +   + V W++MI  +   G 
Sbjct: 941  FHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGH 1000

Query: 317  HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
             ++A+ LF +M    ++    T+  VL+  + +  L   K    L+ +      K  N A
Sbjct: 1001 GRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYA 1060

Query: 377  -LIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
             ++D+  + G L  A  ++ N+  + D   W SL+  C  H + + A K
Sbjct: 1061 CMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEK 1109



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 180/365 (49%), Gaps = 7/365 (1%)

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
           +Q+H  +  +G   + +  + L  +YAKC  L +AR++ + +   N   WNS +  + R+
Sbjct: 21  SQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCRE 80

Query: 315 GFHKEALSLFKKMHARDIKI-DDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK-F 372
              +E L LF  M     +  D+FT P  L   A    L   K +H    K    G   F
Sbjct: 81  KQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMF 140

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM-RIS 431
           V +AL+++Y+K G +  A  VF   Q  D + WTS++TG   +   EEAL  FS M  + 
Sbjct: 141 VGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMD 200

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
            +  D V + S++SACA+L  ++ G  VH + ++      L + NSL+ +YAK GC   A
Sbjct: 201 CVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIA 260

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
             +F  M  +DVI+W+ +I   A N    EAL  + +M+ +  +P+ +T V  L AC+ +
Sbjct: 261 ANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVS 320

Query: 552 -GLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
             L E  + +  ++ K  G +        +ID+  +     EA  L  Q + + D   W 
Sbjct: 321 RNLEEGKKIHKIAVWK--GFELDFSVSTALIDMYMKCSCPDEAVDLF-QRLPKKDVVSWV 377

Query: 611 ALLSA 615
           ALLS 
Sbjct: 378 ALLSG 382



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 125/245 (51%), Gaps = 3/245 (1%)

Query: 66   DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
            D F    ++  YA  G +  A+ +F++   ++  +W+S+I GY++ G + E    F  M+
Sbjct: 852  DLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMR 911

Query: 126  LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
              G  P++ ++ +VL  C   G L++GE FH Y I+T F+ +  V T ++DMY+KC  + 
Sbjct: 912  SSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLD 971

Query: 186  EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
             A  LF     GK+ V W+ MI  Y  +G+G KAI+ F  M   GV  +  TF  +L+AC
Sbjct: 972  LARCLFDE-TAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSAC 1030

Query: 246  AAVSARDFGAQVHGCILSSGFEANVYVQSA-LIDMYAKCGDLDSARRLLEYSEIDNEVS- 303
            +     + G      +      A      A ++D+  + G L  A  L+E   ++ + S 
Sbjct: 1031 SHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASI 1090

Query: 304  WNSMI 308
            W S++
Sbjct: 1091 WGSLL 1095



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 6/204 (2%)

Query: 353 NNAKSV---HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
           NN +SV   HS + KTG     F    L  +YAK  +L  A  VF+     +V  W S +
Sbjct: 15  NNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTL 74

Query: 410 TGCAYHGSYEEALKYFSDMR-ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
                   +EE L+ F  M   +G  PD+  +   L ACA L +LE G+ +H    K+  
Sbjct: 75  RSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDE 134

Query: 469 CSS-LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYD 527
             S + V ++LV +Y+KCG + +A +VF+     D + WT+++ G  QN   +EAL  + 
Sbjct: 135 IGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFS 194

Query: 528 QMLARG-TKPDYITFVGLLFACSH 550
           QM+       D +T V ++ AC+ 
Sbjct: 195 QMVMMDCVVLDPVTLVSVVSACAQ 218



 Score = 47.4 bits (111), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 5/84 (5%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF-----NETPFKNFFT 100
           +S  G + +A +LF+ M  RD   W++MIAAY   GR  EA ++F     N T   N  T
Sbjct: 453 YSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVT 512

Query: 101 WSSLIYGYSNYGLDIEAFELFWQM 124
           + S++   S+ GL  E  ++F +M
Sbjct: 513 FLSILSACSHAGLVEEGLKIFDRM 536


>gi|302807080|ref|XP_002985271.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
 gi|300147099|gb|EFJ13765.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
          Length = 744

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 257/742 (34%), Positives = 407/742 (54%), Gaps = 17/742 (2%)

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
           Y   G +  A++ F+    +N  +WS++I  Y+  G   +A ELF +M  EG + +  T 
Sbjct: 2   YNRCGSVIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAITF 61

Query: 137 DNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG--LVDMYAKCKCIFEAEYLFKMF 194
            +VL  C+  G +  G+  H   +     L   V+ G  +V+MY KC  +  A  +F+  
Sbjct: 62  VSVLDACASLGAIALGKSIHERIVADGL-LGDDVILGNTIVNMYGKCGEVDLAREVFERM 120

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
            + KN V W TMI   S++    +A     +M ++G+  N+ T  S++ ACA + +   G
Sbjct: 121 -EAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRG 179

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
             VH  +   G E++  V +AL+++Y KCG L +AR  LE  E  +++SW +++  +AR 
Sbjct: 180 RIVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARH 239

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
           G  K A+++ K+M    +K+D FT+ ++L    +   L   + +H  + ++G E    + 
Sbjct: 240 GHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQ 299

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQD-KDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
            AL+DMY K GN D A   F+ M+D +DV  W +L+         +E L  F+ M + G+
Sbjct: 300 TALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGV 359

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG------GCSSLSVDNSLVLVYAKCGC 487
            PD V   SIL ACA L  L  G+  H+  L+ G        S+  +  S++ +YAKCG 
Sbjct: 360 APDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGS 419

Query: 488 INDANRVFDSMH---TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           + DA   F         DV+ W+A++   +Q G  +EAL+ +  M   G KPD ++FV  
Sbjct: 420 LADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSA 479

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           +  CSH+GL   A  +F S+   +GI P   H+AC++DLL R+G + EA+AL+ +     
Sbjct: 480 IAGCSHSGLVREAVAFFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAPLGA 539

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
             + W  LLSACR +GDLE   R A  L  L   +A  Y  L++++  + KW+D    R+
Sbjct: 540 HHSTWMTLLSACRTYGDLERARRVAARLASLRSGSA--YSLLASVFCLSRKWDDVRNARQ 597

Query: 665 LMKSRGIRKEPGCSWVETNSQVH-IFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMN 723
            +  RG   +PGCSW+E N++V+  F  +DR  P   +I+++++ + + I++AGY  D  
Sbjct: 598 SLVERGFITQPGCSWIEINNRVYEFFAGDDRLLPREEEIFAELERLCVEIRKAGYERDPI 657

Query: 724 FALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVY 783
             +H+  E+ K+  L+YHSEK+AV FGL++ P+G P+RI KN+ VC DCH  +K IS V 
Sbjct: 658 KKVHDHGEQEKKFLLSYHSEKVAVVFGLISTPEGTPLRIVKNIGVCQDCHEVIKCISEVA 717

Query: 784 LRHIILRDSNRFHHFKAGNCSC 805
            R I LRD   FH F  G+CSC
Sbjct: 718 DRVITLRDDRSFHQFSHGSCSC 739



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 139/475 (29%), Positives = 229/475 (48%), Gaps = 13/475 (2%)

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           MY +C  +  A   F      +N V+W+ MI  Y+Q G+   A+E F  M  EGV++N  
Sbjct: 1   MYNRCGSVIHARRAFDAMV-VRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAI 59

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEAN-VYVQSALIDMYAKCGDLDSARRLLEY 295
           TF S+L ACA++ A   G  +H  I++ G   + V + + +++MY KCG++D AR + E 
Sbjct: 60  TFVSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFER 119

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
            E  N V+WN+MI   +R   +KEA +L  +M    ++ +  T  SV++  A    ++  
Sbjct: 120 MEAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRG 179

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           + VH ++   G E    V NAL+++Y K G L  A      ++ +D ISWT+L+   A H
Sbjct: 180 RIVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARH 239

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G  + A+     M   G+  D     ++L +C  +  L  G+++H    +SG      + 
Sbjct: 240 GHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQ 299

Query: 476 NSLVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
            +LV +Y KCG  + A R FD M   RDV  W AL+       +GKE L  + +M  +G 
Sbjct: 300 TALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGV 359

Query: 535 KPDYITFVGLLFACSH-----AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGK 589
            PD +TF+ +L AC+       G   ++R     +     +         +I++  + G 
Sbjct: 360 APDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGS 419

Query: 590 LIEAKALLDQM--VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           L +AKA   +       D   W A+++A   +    L E A    + ++     P
Sbjct: 420 LADAKAEFAKARRARASDVVAWSAMVAA---YSQFGLSEEALRCFYSMQQEGVKP 471



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 210/393 (53%), Gaps = 11/393 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D    NT++  Y   G +  A+++F     KN  TW+++I   S +    EAF L  +M 
Sbjct: 93  DVILGNTIVNMYGKCGEVDLAREVFERMEAKNTVTWNTMIAACSRHDRYKEAFALLGEMD 152

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           L+G RP++ TL +V+  C+    + RG   H        + +  V   LV++Y KC  + 
Sbjct: 153 LDGLRPNKITLVSVIDACAWMQSISRGRIVHEIVAGEGLESDNAVANALVNLYGKCGKLR 212

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A +  +   + ++ ++WTT++  Y+++G+G +AI   + M  EGV+ + FTF ++L +C
Sbjct: 213 AARHALEGI-ETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESC 271

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE-YSEIDNEVSW 304
            A++A   G ++H  +  SG E +  +Q+AL+DMY KCG+ D+ARR  +   ++ +   W
Sbjct: 272 VAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMRDVRDVTVW 331

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N+++  +  +   KE L +F +M  + +  D  T+ S+L+  AS   L   +  HS +++
Sbjct: 332 NALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLE 391

Query: 365 TGFEGYKFVNNA------LIDMYAKQGNLDCA---FMVFNLMQDKDVISWTSLITGCAYH 415
            G    + V +A      +I+MYAK G+L  A   F      +  DV++W++++   +  
Sbjct: 392 RGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQF 451

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
           G  EEAL+ F  M+  G+ PD V   S ++ C+
Sbjct: 452 GLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCS 484



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 163/370 (44%), Gaps = 17/370 (4%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           + D    N ++  Y   G+LR A+        ++  +W++L+  Y+ +G    A  +  +
Sbjct: 192 ESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKR 251

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M  EG +   +T  N+L  C     L  GE+ H    ++  +L+  + T LVDMY KC  
Sbjct: 252 MDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGN 311

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
              A   F    D ++   W  ++  Y     G + +  F  M ++GV  +  TF SIL 
Sbjct: 312 PDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILD 371

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSA------LIDMYAKCGDLDSARRLL---E 294
           ACA+++A   G   H  +L  G      V SA      +I+MYAKCG L  A+       
Sbjct: 372 ACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKAR 431

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLN 353
            +   + V+W++M+  +++ G  +EAL  F  M    +K D  ++ S +  C  S +   
Sbjct: 432 RARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLVRE 491

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV----ISWTSLI 409
                 SL    G    +     L+D+ ++ G +  A     LM+   +     +W +L+
Sbjct: 492 AVAFFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEA---LMRRAPLGAHHSTWMTLL 548

Query: 410 TGCAYHGSYE 419
           + C  +G  E
Sbjct: 549 SACRTYGDLE 558


>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like, partial [Cucumis sativus]
          Length = 658

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/607 (39%), Positives = 354/607 (58%), Gaps = 1/607 (0%)

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
           W  +I GY+Q       I  + DM++  V  N FTF  +L AC   S    G Q+HG   
Sbjct: 53  WNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTF 112

Query: 263 SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
             GF +NV+VQ++L+ MYAK G +  AR + +       VSW S+I G+ + G   EAL+
Sbjct: 113 KYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALN 172

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYA 382
           +FK+M   ++K D     SV+  + +  DL   KS+H L+ K G E    +  +L  MYA
Sbjct: 173 VFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYA 232

Query: 383 KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
           K+G ++ A   FN M+  ++I W ++I+G A +G  EEA+K F +M    I  D + + S
Sbjct: 233 KRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRS 292

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
            + A A++  LE  + +     KS       V+  L+ +YAKCG I  A  VFD +  +D
Sbjct: 293 AVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKD 352

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
           V+ W+ +IMG   +G G+EA+  Y++M   G  P+  TF+GLL AC ++GL +     F 
Sbjct: 353 VVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFH 412

Query: 563 SMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDL 622
            M   +GI+P   HY+C++DLLGR+G L +A   +  M  +P  +VW ALLSAC++H  +
Sbjct: 413 LMPD-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKV 471

Query: 623 ELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVET 682
            LGE AA  LF L+P N   YVQLSN+Y++A  W   A VR +M  +G+ K+ G S +E 
Sbjct: 472 RLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEI 531

Query: 683 NSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHS 742
           N  +  F   DR HP   +I+ ++D +   +K AGYVP M   LH++  E  E  L +HS
Sbjct: 532 NGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHS 591

Query: 743 EKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGN 802
           E+LAVA+G+++   G  +RI KNLR C +CH+A+K IS +  R II+RD+ RFHHFK G 
Sbjct: 592 ERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGV 651

Query: 803 CSCGDYW 809
           CSCGD+W
Sbjct: 652 CSCGDFW 658



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/446 (30%), Positives = 222/446 (49%), Gaps = 2/446 (0%)

Query: 74  IAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQ 133
           I A  + G +  A K F E    +   W+++I GY+   +      ++  MQ+    P+ 
Sbjct: 26  INACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNC 85

Query: 134 YTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKM 193
           +T   VL+ C    +   G+Q HG   K  F  N FV   LV MYAK   I  A  +F  
Sbjct: 86  FTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDK 145

Query: 194 FPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDF 253
             D +  V+WT++I+GY QNG   +A+  F++MR   V+ +     S++TA   V     
Sbjct: 146 LHD-RTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQ 204

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           G  +HG +   G E    +  +L  MYAK G ++ AR      E  N + WN+MI G+A 
Sbjct: 205 GKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYAN 264

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
            G+ +EA+ LF++M  ++I++D  T  S +   A    L  A+ +   I K+ +    FV
Sbjct: 265 NGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFV 324

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
           N  LIDMYAK G++  A  VF+ + DKDV+ W+ +I G   HG  +EA+  +++M+ +G+
Sbjct: 325 NTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGV 384

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
           CP+      +L+AC    +++ G ++  +    G        + +V +  + G +N A  
Sbjct: 385 CPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYD 444

Query: 494 VFDSMHTRD-VITWTALIMGCAQNGK 518
              SM  +  V  W AL+  C  + K
Sbjct: 445 FIMSMPIKPGVSVWGALLSACKIHRK 470



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 203/431 (47%), Gaps = 25/431 (5%)

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           QV+  ++ SG     ++    I+     GD++ A +        + + WN++I G+ ++ 
Sbjct: 5   QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 64

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
                + ++  M    +  + FT+  VL  C  ++++    K +H    K GF    FV 
Sbjct: 65  IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVE-GIGKQIHGQTFKYGFGSNVFVQ 123

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           N+L+ MYAK G +  A +VF+ + D+ V+SWTS+I+G   +G   EAL  F +MR   + 
Sbjct: 124 NSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVK 183

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           PD + + S+++A   +  L  G+ +H +  K G      +  SL  +YAK G +  A   
Sbjct: 184 PDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFF 243

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
           F+ M   ++I W A+I G A NG G+EA++ + +M+ +  + D IT    + A +  G  
Sbjct: 244 FNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSL 303

Query: 555 ENARWY------FESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           E ARW        E  D  + +  G      +ID+  + G +  A+ + D+ V + D  +
Sbjct: 304 ELARWLDGYISKSEYRDDTF-VNTG------LIDMYAKCGSIYLARCVFDR-VADKDVVL 355

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMP----YVQLSNMYSTAGKWEDAARVRK 664
           W  ++    +HG    G+ A     E++     P    ++ L      +G  ++   +  
Sbjct: 356 WSVMIMGYGLHGH---GQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFH 412

Query: 665 LMKSRGIRKEP 675
           LM   GI  EP
Sbjct: 413 LMPDHGI--EP 421



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 178/361 (49%), Gaps = 2/361 (0%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           GQ F+     + F  N++++ YA  G++  A+ +F++   +   +W+S+I GY   G  +
Sbjct: 109 GQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPM 168

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  +F +M+    +P    L +V+   +    L +G+  HG   K   +    +V  L 
Sbjct: 169 EALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLT 228

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
            MYAK   +  A + F    +  N + W  MI+GY+ NGYG +AI+ FR+M  + +  + 
Sbjct: 229 TMYAKRGLVEVARFFFNRM-EKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDS 287

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            T  S + A A V + +    + G I  S +  + +V + LIDMYAKCG +  AR + + 
Sbjct: 288 ITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDR 347

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               + V W+ MI+G+   G  +EA+ L+ +M    +  +D T+  +L    ++  +   
Sbjct: 348 VADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEG 407

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAY 414
             +  L+   G E +    + ++D+  + G L+ A+     M  K  +S W +L++ C  
Sbjct: 408 WELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKI 467

Query: 415 H 415
           H
Sbjct: 468 H 468



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 116/264 (43%), Gaps = 33/264 (12%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++  G ++ A   F +M   +   WN MI+ YAN+G   EA KLF E   KN        
Sbjct: 231 YAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNI------- 283

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                                   R    T+ + +   +  G L+      GY  K+ + 
Sbjct: 284 ------------------------RVDSITMRSAVLASAQVGSLELARWLDGYISKSEYR 319

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            + FV TGL+DMYAKC  I+ A  +F    D K+ V W+ MI GY  +G+G +AI  + +
Sbjct: 320 DDTFVNTGLIDMYAKCGSIYLARCVFDRVAD-KDVVLWSVMIMGYGLHGHGQEAICLYNE 378

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M+  GV  N  TF  +LTAC        G ++   +   G E +    S ++D+  + G 
Sbjct: 379 MKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGY 438

Query: 286 LDSARRLLEYSEIDNEVS-WNSMI 308
           L+ A   +    I   VS W +++
Sbjct: 439 LNQAYDFIMSMPIKPGVSVWGALL 462



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 5/122 (4%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP--- 94
           +N  L+D ++  G I  A  +F++++D+D   W+ MI  Y   G  +EA  L+NE     
Sbjct: 324 VNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAG 383

Query: 95  -FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE 153
              N  T+  L+    N GL  E +ELF  M   G  P       V+ L    G L +  
Sbjct: 384 VCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAY 443

Query: 154 QF 155
            F
Sbjct: 444 DF 445


>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 673

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/607 (39%), Positives = 354/607 (58%), Gaps = 1/607 (0%)

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
           W  +I GY+Q       I  + DM++  V  N FTF  +L AC   S    G Q+HG   
Sbjct: 68  WNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTF 127

Query: 263 SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
             GF +NV+VQ++L+ MYAK G +  AR + +       VSW S+I G+ + G   EAL+
Sbjct: 128 KYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALN 187

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYA 382
           +FK+M   ++K D     SV+  + +  DL   KS+H L+ K G E    +  +L  MYA
Sbjct: 188 VFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYA 247

Query: 383 KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
           K+G ++ A   FN M+  ++I W ++I+G A +G  EEA+K F +M    I  D + + S
Sbjct: 248 KRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRS 307

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
            + A A++  LE  + +     KS       V+  L+ +YAKCG I  A  VFD +  +D
Sbjct: 308 AVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKD 367

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
           V+ W+ +IMG   +G G+EA+  Y++M   G  P+  TF+GLL AC ++GL +     F 
Sbjct: 368 VVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFH 427

Query: 563 SMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDL 622
            M   +GI+P   HY+C++DLLGR+G L +A   +  M  +P  +VW ALLSAC++H  +
Sbjct: 428 LMPD-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKV 486

Query: 623 ELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVET 682
            LGE AA  LF L+P N   YVQLSN+Y++A  W   A VR +M  +G+ K+ G S +E 
Sbjct: 487 RLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEI 546

Query: 683 NSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHS 742
           N  +  F   DR HP   +I+ ++D +   +K AGYVP M   LH++  E  E  L +HS
Sbjct: 547 NGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHS 606

Query: 743 EKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGN 802
           E+LAVA+G+++   G  +RI KNLR C +CH+A+K IS +  R II+RD+ RFHHFK G 
Sbjct: 607 ERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGV 666

Query: 803 CSCGDYW 809
           CSCGD+W
Sbjct: 667 CSCGDFW 673



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/446 (30%), Positives = 222/446 (49%), Gaps = 2/446 (0%)

Query: 74  IAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQ 133
           I A  + G +  A K F E    +   W+++I GY+   +      ++  MQ+    P+ 
Sbjct: 41  INACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNC 100

Query: 134 YTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKM 193
           +T   VL+ C    +   G+Q HG   K  F  N FV   LV MYAK   I  A  +F  
Sbjct: 101 FTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDK 160

Query: 194 FPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDF 253
             D +  V+WT++I+GY QNG   +A+  F++MR   V+ +     S++TA   V     
Sbjct: 161 LHD-RTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQ 219

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           G  +HG +   G E    +  +L  MYAK G ++ AR      E  N + WN+MI G+A 
Sbjct: 220 GKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYAN 279

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
            G+ +EA+ LF++M  ++I++D  T  S +   A    L  A+ +   I K+ +    FV
Sbjct: 280 NGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFV 339

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
           N  LIDMYAK G++  A  VF+ + DKDV+ W+ +I G   HG  +EA+  +++M+ +G+
Sbjct: 340 NTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGV 399

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
           CP+      +L+AC    +++ G ++  +    G        + +V +  + G +N A  
Sbjct: 400 CPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYD 459

Query: 494 VFDSMHTRD-VITWTALIMGCAQNGK 518
              SM  +  V  W AL+  C  + K
Sbjct: 460 FIMSMPIKPGVSVWGALLSACKIHRK 485



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 203/431 (47%), Gaps = 25/431 (5%)

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           QV+  ++ SG     ++    I+     GD++ A +        + + WN++I G+ ++ 
Sbjct: 20  QVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKN 79

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
                + ++  M    +  + FT+  VL  C  ++++    K +H    K GF    FV 
Sbjct: 80  IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVE-GIGKQIHGQTFKYGFGSNVFVQ 138

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           N+L+ MYAK G +  A +VF+ + D+ V+SWTS+I+G   +G   EAL  F +MR   + 
Sbjct: 139 NSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVK 198

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           PD + + S+++A   +  L  G+ +H +  K G      +  SL  +YAK G +  A   
Sbjct: 199 PDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFF 258

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
           F+ M   ++I W A+I G A NG G+EA++ + +M+ +  + D IT    + A +  G  
Sbjct: 259 FNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSL 318

Query: 555 ENARWY------FESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           E ARW        E  D  + +  G      +ID+  + G +  A+ + D+ V + D  +
Sbjct: 319 ELARWLDGYISKSEYRDDTF-VNTG------LIDMYAKCGSIYLARCVFDR-VADKDVVL 370

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMP----YVQLSNMYSTAGKWEDAARVRK 664
           W  ++    +HG    G+ A     E++     P    ++ L      +G  ++   +  
Sbjct: 371 WSVMIMGYGLHGH---GQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFH 427

Query: 665 LMKSRGIRKEP 675
           LM   GI  EP
Sbjct: 428 LMPDHGI--EP 436



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 178/361 (49%), Gaps = 2/361 (0%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           GQ F+     + F  N++++ YA  G++  A+ +F++   +   +W+S+I GY   G  +
Sbjct: 124 GQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPM 183

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  +F +M+    +P    L +V+   +    L +G+  HG   K   +    +V  L 
Sbjct: 184 EALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLT 243

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
            MYAK   +  A + F    +  N + W  MI+GY+ NGYG +AI+ FR+M  + +  + 
Sbjct: 244 TMYAKRGLVEVARFFFNRM-EKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDS 302

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            T  S + A A V + +    + G I  S +  + +V + LIDMYAKCG +  AR + + 
Sbjct: 303 ITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDR 362

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               + V W+ MI+G+   G  +EA+ L+ +M    +  +D T+  +L    ++  +   
Sbjct: 363 VADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEG 422

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAY 414
             +  L+   G E +    + ++D+  + G L+ A+     M  K  +S W +L++ C  
Sbjct: 423 WELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKI 482

Query: 415 H 415
           H
Sbjct: 483 H 483



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 131/264 (49%), Gaps = 2/264 (0%)

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
           L +   V+  ++ +G    +F+    I+     G+++ A   F  + + D++ W ++I G
Sbjct: 15  LKHLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKG 74

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
                  +  ++ + DM+IS + P+      +L AC   +V   G+Q+H    K G  S+
Sbjct: 75  YTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSN 134

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
           + V NSLV +YAK G I+ A  VFD +H R V++WT++I G  QNG   EAL  + +M  
Sbjct: 135 VFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQ 194

Query: 532 RGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLI 591
              KPD+I  V ++ A ++       +     + K+ G++  PD    +  +  + G L+
Sbjct: 195 CNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKL-GLEFEPDIVISLTTMYAKRG-LV 252

Query: 592 EAKALLDQMVGEPDATVWKALLSA 615
           E        + +P+  +W A++S 
Sbjct: 253 EVARFFFNRMEKPNLILWNAMISG 276



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 116/264 (43%), Gaps = 33/264 (12%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++  G ++ A   F +M   +   WN MI+ YAN+G   EA KLF E   KN        
Sbjct: 246 YAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNI------- 298

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                                   R    T+ + +   +  G L+      GY  K+ + 
Sbjct: 299 ------------------------RVDSITMRSAVLASAQVGSLELARWLDGYISKSEYR 334

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            + FV TGL+DMYAKC  I+ A  +F    D K+ V W+ MI GY  +G+G +AI  + +
Sbjct: 335 DDTFVNTGLIDMYAKCGSIYLARCVFDRVAD-KDVVLWSVMIMGYGLHGHGQEAICLYNE 393

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M+  GV  N  TF  +LTAC        G ++   +   G E +    S ++D+  + G 
Sbjct: 394 MKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGY 453

Query: 286 LDSARRLLEYSEIDNEVS-WNSMI 308
           L+ A   +    I   VS W +++
Sbjct: 454 LNQAYDFIMSMPIKPGVSVWGALL 477



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 5/122 (4%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP--- 94
           +N  L+D ++  G I  A  +F++++D+D   W+ MI  Y   G  +EA  L+NE     
Sbjct: 339 VNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAG 398

Query: 95  -FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE 153
              N  T+  L+    N GL  E +ELF  M   G  P       V+ L    G L +  
Sbjct: 399 VCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAY 458

Query: 154 QF 155
            F
Sbjct: 459 DF 460


>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
          Length = 647

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 217/541 (40%), Positives = 337/541 (62%)

Query: 269 NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH 328
           NV   + LI  Y K GDL++AR+L +     N  +WN+M+ G    G ++E+L  F  M 
Sbjct: 107 NVMSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMR 166

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD 388
              ++ D++   S+  C A   D+ + + VH+ +V++G +    V ++L  MY + G L 
Sbjct: 167 REGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLR 226

Query: 389 CAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
                   +   +++S  + I+G   +G  E AL++F  MR +G+  + V   S +++C+
Sbjct: 227 DGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCS 286

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
           +L  L  GQQ+HA+ +K+G    + V  SLV +Y++CGC+ D+ RV       D++  +A
Sbjct: 287 DLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSA 346

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
           +I     +G G++A+  + QM+A G +P+ +TF+ LL+ACSH+GL +     FE M K Y
Sbjct: 347 MISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTY 406

Query: 569 GIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
           G++P   HY C++DLLGRSG L EA+ L+  M  +PD  +WK LLSAC+     ++ ER 
Sbjct: 407 GLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERI 466

Query: 629 ANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHI 688
           A  + EL+P ++  YV LSN+ +T+ +WED ++VR+ M+ + +RKEPG SWVE   Q+H 
Sbjct: 467 AERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQ 526

Query: 689 FISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVA 748
           F + D  H  + +I   ++E+M  I++ GY PDM+   H++E+E KE+ LA+HSEKLA+A
Sbjct: 527 FCTGDESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIA 586

Query: 749 FGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDY 808
           F  L+LP+G PIR+ KNLRVC DCH A+K +S V  R I++RD +RFHHFK G CSCGDY
Sbjct: 587 FAFLSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDY 646

Query: 809 W 809
           W
Sbjct: 647 W 647



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/385 (30%), Positives = 208/385 (54%), Gaps = 5/385 (1%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  L+ +++ G+   A  LFE++  R+  +WN +I  Y  +G L  A+KLF+E P +N  
Sbjct: 81  NHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLFDEMPARNVA 140

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           TW++++ G +N GL+ E+   F+ M+ EG +P +Y L ++ R C+    +  G Q H Y 
Sbjct: 141 TWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYV 200

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           +++  D +  V + L  MY +C  + + E   +  P   N V+  T I+G +QNG    A
Sbjct: 201 VRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPS-LNIVSCNTTISGRTQNGDAEGA 259

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           +E F  MR  GVE+N  TF S +T+C+ ++A   G Q+H   + +G +  V V ++L+ M
Sbjct: 260 LEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHM 319

Query: 280 YAKCGDL-DSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
           Y++CG L DS R  LEYS  D  V  ++MI  +   G  ++A+ LFK+M A   + ++ T
Sbjct: 320 YSRCGCLGDSERVCLEYSGTD-LVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVT 378

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKT-GFEGYKFVNNALIDMYAKQGNLDCAF-MVFNL 396
           + ++L   + +   +   +   L+ KT G +        ++D+  + G L+ A  ++ ++
Sbjct: 379 FLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSM 438

Query: 397 MQDKDVISWTSLITGCAYHGSYEEA 421
               D + W +L++ C     ++ A
Sbjct: 439 PVQPDGVIWKTLLSACKTQKKFDMA 463



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 161/347 (46%), Gaps = 3/347 (0%)

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
           L+  Y K   +  A  LF   P  +N   W  M+ G + +G   +++  F  MR EG++ 
Sbjct: 114 LIGGYVKNGDLETARKLFDEMP-ARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQP 172

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
           +++   S+   CA +     G QVH  ++ SG + ++ V S+L  MY +CG L      L
Sbjct: 173 DEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAAL 232

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
                 N VS N+ I G  + G  + AL  F  M    ++ +  T+ S +   +    L 
Sbjct: 233 RALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALA 292

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
             + +H+L +KTG +    V  +L+ MY++ G L  +  V       D++  +++I+   
Sbjct: 293 QGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYG 352

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SL 472
           +HG  ++A+  F  M  +G  P+ V   ++L AC+   + + G     +  K+ G   S+
Sbjct: 353 FHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSV 412

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGK 518
                +V +  + GC+N+A  +  SM  + D + W  L+  C    K
Sbjct: 413 KHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKK 459



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 81/158 (51%), Gaps = 13/158 (8%)

Query: 416 GSYEEAL-KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
           G  +EAL + F +    G+  +  + S I  AC  L +L   +Q+HA    SG  +    
Sbjct: 27  GRVKEALHRRFRE----GLWSEPGLFSHIFRACQALPLL---RQLHAFAATSGAAADRFT 79

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
            N L+L YA  G    A  +F+ +  R+V++W  LI G  +NG  + A + +D+M AR  
Sbjct: 80  ANHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLFDEMPAR-- 137

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKP 572
             +  T+  ++   +++GL E +  +F +M +  G++P
Sbjct: 138 --NVATWNAMVAGLTNSGLNEESLGFFFAMRR-EGMQP 172


>gi|125572887|gb|EAZ14402.1| hypothetical protein OsJ_04322 [Oryza sativa Japonica Group]
          Length = 490

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 240/509 (47%), Positives = 310/509 (60%), Gaps = 29/509 (5%)

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           V+ N+ I   +R G H+ AL+LF +M AR ++ D++T P +LN  A       A     L
Sbjct: 10  VACNAAISRCSRAGLHRRALALFTEMRARGLRADEYTLPPILNSAALLRAPPAAALHALL 69

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           +       +  V NAL+D YAK   L  A  VF+ M  +DV++WTSL+TG         A
Sbjct: 70  LRAG-LASHLHVANALVDAYAKLSRLGAARAVFDEMPRRDVVTWTSLVTG---------A 119

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
                        P H                +  +++     ++G   SL         
Sbjct: 120 RPRRIPRPGRSRLPRHGRRWGRHRRVRRRGRAQLVRRLDRA--RAGPTGSL--------- 168

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
                   DA  VFD+M +R  ITWTALI+G AQNG+G+E+L  Y  M   G +PDY+TF
Sbjct: 169 -------RDARTVFDAMRSRCAITWTALIVGYAQNGRGRESLAVYADMARSGCRPDYVTF 221

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM- 600
           VGLLFACSHAGL +  R +F+SM   +GI PGPDHYACM+DLLGR+G+L EA  LLD+  
Sbjct: 222 VGLLFACSHAGLLDAGRAHFQSMQSEHGISPGPDHYACMVDLLGRAGRLGEAVDLLDRSP 281

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAA 660
             E DATVWKALL+ACR H +  L ERAA  ++ L+P +AMPYV LSN+YS A +W D A
Sbjct: 282 AAELDATVWKALLAACRTHRNAALAERAAGMVWRLDPTDAMPYVMLSNLYSRARRWGDVA 341

Query: 661 RVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
           RVR LM+SRGI KEPGCSWV      H+F + DR H    +IY K +E+   I+  G+VP
Sbjct: 342 RVRALMRSRGISKEPGCSWVVVAGVTHVFHAGDRDHQRAAEIYRKAEEMAARIRARGHVP 401

Query: 721 DMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYIS 780
           D  +AL +   EG+E+GLA+H E+LAVAFGLL +P  APIR++KNLRVCGDCH A+K ++
Sbjct: 402 DTEWALQDEAPEGREMGLAHHGERLAVAFGLLAVPAAAPIRVYKNLRVCGDCHAAIKMVA 461

Query: 781 AVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            VY R IILRDSN FHH K G+CSCGDYW
Sbjct: 462 EVYGREIILRDSNCFHHMKDGSCSCGDYW 490



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 92/243 (37%), Gaps = 33/243 (13%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++ AYA   RL  A+ +F+E P ++  TW+SL+ G     +         +      R
Sbjct: 82  NALVDAYAKLSRLGAARAVFDEMPRRDVVTWTSLVTGARPRRIPRPGRSRLPRHGRRWGR 141

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
             +       +L       + G        +T FD           M ++C         
Sbjct: 142 HRRVRRRGRAQLVRRLDRARAGPTGSLRDARTVFDA----------MRSRCA-------- 183

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
                     + WT +I GY+QNG G +++  + DM   G   +  TF  +L AC+    
Sbjct: 184 ----------ITWTALIVGYAQNGRGRESLAVYADMARSGCRPDYVTFVGLLFACSHAGL 233

Query: 251 RDFG-AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS---EIDNEVSWNS 306
            D G A         G        + ++D+  + G L  A  LL+ S   E+D  V W +
Sbjct: 234 LDAGRAHFQSMQSEHGISPGPDHYACMVDLLGRAGRLGEAVDLLDRSPAAELDATV-WKA 292

Query: 307 MIV 309
           ++ 
Sbjct: 293 LLA 295



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 1/113 (0%)

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           K +++  + I+ C+  G +  AL  F++MR  G+  D   +  IL++ A L         
Sbjct: 7   KGLVACNAAISRCSRAGLHRRALALFTEMRARGLRADEYTLPPILNSAALLRAPPAAALH 66

Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMG 512
             +       S L V N+LV  YAK   +  A  VFD M  RDV+TWT+L+ G
Sbjct: 67  ALLLRAGLA-SHLHVANALVDAYAKLSRLGAARAVFDEMPRRDVVTWTSLVTG 118



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 14/255 (5%)

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
           P GK  VA    I+  S+ G   +A+  F +MR  G+ ++++T P IL + A + A    
Sbjct: 4   PGGKGLVACNAAISRCSRAGLHRRALALFTEMRARGLRADEYTLPPILNSAALLRAPPAA 63

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
           A     +L +G  ++++V +AL+D YAK   L +AR + +     + V+W S++ G   +
Sbjct: 64  ALHAL-LLRAGLASHLHVANALVDAYAKLSRLGAARAVFDEMPRRDVVTWTSLVTGARPR 122

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI-VKTGFEGYK-- 371
              +   S   +   R  +                +D   A    SL   +T F+  +  
Sbjct: 123 RIPRPGRSRLPRHGRRWGRHRRVRRRGRAQ-LVRRLDRARAGPTGSLRDARTVFDAMRSR 181

Query: 372 --FVNNALIDMYAKQGNLDCAFMVFNLMQ----DKDVISWTSLITGCAYHGSYEEALKYF 425
                 ALI  YA+ G    +  V+  M       D +++  L+  C++ G  +    +F
Sbjct: 182 CAITWTALIVGYAQNGRGRESLAVYADMARSGCRPDYVTFVGLLFACSHAGLLDAGRAHF 241

Query: 426 SDMRIS-GIC--PDH 437
             M+   GI   PDH
Sbjct: 242 QSMQSEHGISPGPDH 256



 Score = 40.4 bits (93), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 46/114 (40%), Gaps = 2/114 (1%)

Query: 96  KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
           K     ++ I   S  GL   A  LF +M+  G R  +YTL  +L   +L          
Sbjct: 7   KGLVACNAAISRCSRAGLHRRALALFTEMRARGLRADEYTLPPILNSAALLRAPPAAALH 66

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
                      +  V   LVD YAK   +  A  +F   P  ++ V WT+++TG
Sbjct: 67  ALLLRAGLAS-HLHVANALVDAYAKLSRLGAARAVFDEMPR-RDVVTWTSLVTG 118


>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1057

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 244/654 (37%), Positives = 385/654 (58%), Gaps = 5/654 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           DRD +    +I  Y   G +  A+ +F+  P K+  TW+++I G    G    + +LF+Q
Sbjct: 180 DRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           +      P  Y L  VL  CS+   L+ G+Q H + ++   + +A ++  L+D Y KC  
Sbjct: 240 LMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGR 299

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +  A  LF   P+ KN ++WTT+++GY QN    +A+E F  M   G++ + F   SILT
Sbjct: 300 VRAAHKLFDGMPN-KNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILT 358

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           +CA++ A +FG QVH   + +    + YV ++LIDMYAKC  L  AR++ +    D+ V 
Sbjct: 359 SCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVL 418

Query: 304 WNSMIVGFARQGFHKE---ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
           +N+MI G++R G   E   AL++F  M  R I+    T+ S+L   AS   L  +K +H 
Sbjct: 419 FNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHG 478

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
           L+ K G     F  +ALI +Y+    L  + +VF+ M+ KD++ W S+ +G       EE
Sbjct: 479 LMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEE 538

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
           AL  F ++++S   PD      +++A   L  L+ GQ+ H   LK G   +  + N+L+ 
Sbjct: 539 ALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALLD 598

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           +YAKCG   DA++ FDS  +RDV+ W ++I   A +G+G++ALQ  ++M+  G +P+YIT
Sbjct: 599 MYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYIT 658

Query: 541 FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
           FVG+L ACSHAGL E+    FE M + +GI+P  +HY CM+ LLGR+G+L EA+ L+++M
Sbjct: 659 FVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNEARELIEKM 717

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAA 660
             +P A VW++LLS C   G++EL E AA      +P ++  +  LSN+Y++ G W DA 
Sbjct: 718 PTKPAAIVWRSLLSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNIYASKGMWTDAK 777

Query: 661 RVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIK 714
           +VR+ MK  G+ KEPG SW+E N +VHIF+S+D+ H     IY  +D++++ I+
Sbjct: 778 KVRERMKFEGVVKEPGRSWIEINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831



 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 184/635 (28%), Positives = 315/635 (49%), Gaps = 28/635 (4%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           GQ+     + D +  N ++  Y+ +G +  A+K+F + P +N  TWS+++   +++G   
Sbjct: 68  GQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGFYE 127

Query: 116 EA---FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE----QFHGYAIKTCFDLNA 168
           E+   F  FW+ +     P++Y L + ++ CS  GL   G     Q   + +K+ FD + 
Sbjct: 128 ESLVVFLDFWRTRKNS--PNEYILSSFIQACS--GLDGSGRWMVFQLQSFLVKSRFDRDV 183

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
           +V T L+D Y K   I  A  +F   P+ K+ V WTTMI+G  + G  + +++ F  +  
Sbjct: 184 YVGTLLIDFYLKEGNIDYARLVFDALPE-KSTVTWTTMISGCVKMGRSYVSLQLFYQLME 242

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
             V  + +   ++L+AC+ +   + G Q+H  IL  G E +  + + LID Y KCG + +
Sbjct: 243 GNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRA 302

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
           A +L +     N +SW +++ G+ +   HKEA+ LF  M    +K D F   S+L   AS
Sbjct: 303 AHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCAS 362

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
              L     VH+  +K       +V N+LIDMYAK   L  A  VF++    DV+ + ++
Sbjct: 363 LHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAM 422

Query: 409 ITGCAYHGSYEE---ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
           I G +  G+  E   AL  F DMR   I P  +   S+L A A LT L   +Q+H +  K
Sbjct: 423 IEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK 482

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
            G    +   ++L+ VY+ C C+ D+  VFD M  +D++ W ++  G  Q  + +EAL  
Sbjct: 483 FGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNL 542

Query: 526 YDQMLARGTKPDYITFVGLLFACSH-AGLAENARWYFESMDKVYGIKPGPDHYACMIDLL 584
           + ++     +PD  TFV ++ A  + A L     ++ + + +  G++  P     ++D+ 
Sbjct: 543 FLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKR--GLECNPYITNALLDMY 600

Query: 585 GRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL-----EPMN 639
            + G   +A    D      D   W +++S+   HG+   G +A   L ++     EP N
Sbjct: 601 AKCGSPEDAHKAFDSAASR-DVVCWNSVISSYANHGE---GRKALQMLEKMMCEGIEP-N 655

Query: 640 AMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
            + +V + +  S AG  ED  +  +LM   GI  E
Sbjct: 656 YITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPE 690



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 153/555 (27%), Positives = 267/555 (48%), Gaps = 43/555 (7%)

Query: 24  RYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRL 83
           RY H      K AS +N  +  +   G +  A +LF+ M +++  +W T+++ Y  +   
Sbjct: 277 RYGHE-----KDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLH 331

Query: 84  REAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLC 143
           +EA +LF   P                +GL                +P  +   ++L  C
Sbjct: 332 KEAMELFTSMP---------------KFGL----------------KPDMFACSSILTSC 360

Query: 144 SLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAW 203
           +    L+ G Q H Y IK     +++V   L+DMYAKC C+ EA  +F +F    + V +
Sbjct: 361 ASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFA-ADDVVLF 419

Query: 204 TTMITGYSQNGYGFK---AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
             MI GYS+ G  ++   A+  F DMR   +  +  TF S+L A A++++     Q+HG 
Sbjct: 420 NAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGL 479

Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEA 320
           +   G   +++  SALI +Y+ C  L  +R + +  ++ + V WNSM  G+ +Q  ++EA
Sbjct: 480 MFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEA 539

Query: 321 LSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDM 380
           L+LF ++     + D+FT+  ++    +   L   +  H  ++K G E   ++ NAL+DM
Sbjct: 540 LNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDM 599

Query: 381 YAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVV 440
           YAK G+ + A   F+    +DV+ W S+I+  A HG   +AL+    M   GI P+++  
Sbjct: 600 YAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITF 659

Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT 500
             +LSAC+   ++E G +   + L+ G          +V +  + G +N+A  + + M T
Sbjct: 660 VGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPT 719

Query: 501 RD-VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW 559
           +   I W +L+ GCA+ G   E  ++  +M       D  +F  L    +  G+  +A+ 
Sbjct: 720 KPAAIVWRSLLSGCAKAGN-VELAEYAAEMAILSDPKDSGSFTLLSNIYASKGMWTDAKK 778

Query: 560 YFESMDKVYGIKPGP 574
             E M K  G+   P
Sbjct: 779 VRERM-KFEGVVKEP 792



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 132/417 (31%), Positives = 227/417 (54%), Gaps = 7/417 (1%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           +L+L +L   L      HG  I +  +L+ ++   L+++Y++   +  A  +F+  P+ +
Sbjct: 50  LLQLRALDDPLLYHNVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPE-R 108

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILTACAAV--SARDFGA 255
           N V W+TM++  + +G+  +++  F D  R      N++   S + AC+ +  S R    
Sbjct: 109 NLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVF 168

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           Q+   ++ S F+ +VYV + LID Y K G++D AR + +     + V+W +MI G  + G
Sbjct: 169 QLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
               +L LF ++   ++  D +   +VL+  +    L   K +H+ I++ G E    + N
Sbjct: 229 RSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMN 288

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
            LID Y K G +  A  +F+ M +K++ISWT+L++G   +  ++EA++ F+ M   G+ P
Sbjct: 289 VLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKP 348

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           D    SSIL++CA L  LEFG QVHA  +K+   +   V NSL+ +YAKC C+ +A +VF
Sbjct: 349 DMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVF 408

Query: 496 DSMHTRDVITWTALIMGCAQNGKGKE---ALQFYDQMLARGTKPDYITFVGLLFACS 549
           D     DV+ + A+I G ++ G   E   AL  +  M  R  +P  +TFV LL A +
Sbjct: 409 DIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASA 465


>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g35130, chloroplastic; Flags: Precursor
 gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
 gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
 gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 804

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 270/808 (33%), Positives = 434/808 (53%), Gaps = 46/808 (5%)

Query: 10  NFSLRCRSKIIGPARYT----HNVGNSVK-PASDLNRALVDFSNSGEIDEAGQLFEKMSD 64
           N +L   S I  PAR      + V   V  PA  L RAL  F++S  +++A QLF++M+ 
Sbjct: 35  NRNLEFDSGISKPARLVLRDRYKVTKQVNDPA--LTRALRGFADSRLMEDALQLFDEMNK 92

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
            D F WN MI                                G+++ GL IEA + + +M
Sbjct: 93  ADAFLWNVMIK-------------------------------GFTSCGLYIEAVQFYSRM 121

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
              G +   +T   V++  +    L+ G++ H   IK  F  + +V   L+ +Y K  C 
Sbjct: 122 VFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCA 181

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
           ++AE +F+  P+ ++ V+W +MI+GY   G GF ++  F++M   G + ++F+  S L A
Sbjct: 182 WDAEKVFEEMPE-RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGA 240

Query: 245 CAAVSARDFGAQVHGCILSSGFEA-NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           C+ V +   G ++H   + S  E  +V V ++++DMY+K G++  A R+       N V+
Sbjct: 241 CSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVA 300

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           WN MI  +AR G   +A   F+KM  ++ ++ D  T  ++L   A    +   +++H   
Sbjct: 301 WNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYA 356

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           ++ GF  +  +  ALIDMY + G L  A ++F+ M +K+VISW S+I     +G    AL
Sbjct: 357 MRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSAL 416

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
           + F ++  S + PD   ++SIL A AE   L  G+++HA  +KS   S+  + NSLV +Y
Sbjct: 417 ELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMY 476

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
           A CG + DA + F+ +  +DV++W ++IM  A +G G+ ++  + +M+A    P+  TF 
Sbjct: 477 AMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFA 536

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
            LL ACS +G+ +    YFESM + YGI PG +HY CM+DL+GR+G    AK  L++M  
Sbjct: 537 SLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPF 596

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
            P A +W +LL+A R H D+ + E AA  +F++E  N   YV L NMY+ AG+WED  R+
Sbjct: 597 VPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRI 656

Query: 663 RKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAG-YVPD 721
           + LM+S+GI +    S VE   + H+F + DR H     IY  +D +  ++ E   YV  
Sbjct: 657 KLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHC 716

Query: 722 MNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISA 781
           ++        + +      HS +LA  FGL++   G  + +  N R+C  CH  ++  S 
Sbjct: 717 VSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASR 776

Query: 782 VYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +  R I++ DS  FHHF  G CSCG+YW
Sbjct: 777 LTRREIVVGDSKIFHHFSNGRCSCGNYW 804


>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial; Flags: Precursor
 gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 628

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 237/614 (38%), Positives = 368/614 (59%), Gaps = 6/614 (0%)

Query: 199 NHVAWTTM-ITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           N+V  T + I+    NG   +  E   +M + G E     + ++L AC    A   G +V
Sbjct: 18  NYVLQTILPISQLCSNG---RLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRV 74

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           H  ++ + +    Y+++ L+  Y KC  L+ AR++L+     N VSW +MI  +++ G  
Sbjct: 75  HAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHS 134

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
            EAL++F +M   D K ++FT+ +VL        L   K +H LIVK  ++ + FV ++L
Sbjct: 135 SEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSL 194

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           +DMYAK G +  A  +F  + ++DV+S T++I G A  G  EEAL+ F  +   G+ P++
Sbjct: 195 LDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNY 254

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
           V  +S+L+A + L +L+ G+Q H   L+        + NSL+ +Y+KCG ++ A R+FD+
Sbjct: 255 VTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDN 314

Query: 498 MHTRDVITWTALIMGCAQNGKGKEALQFYDQML-ARGTKPDYITFVGLLFACSHAGLAEN 556
           M  R  I+W A+++G +++G G+E L+ +  M   +  KPD +T + +L  CSH  + + 
Sbjct: 315 MPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDT 374

Query: 557 ARWYFESM-DKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
               F+ M    YG KPG +HY C++D+LGR+G++ EA   + +M  +P A V  +LL A
Sbjct: 375 GLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGA 434

Query: 616 CRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEP 675
           CRVH  +++GE     L E+EP NA  YV LSN+Y++AG+W D   VR +M  + + KEP
Sbjct: 435 CRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEP 494

Query: 676 GCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKE 735
           G SW++    +H F + DR HP R ++ +K+ EI + +K+AGYVPD++  L++V+EE KE
Sbjct: 495 GRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKE 554

Query: 736 IGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRF 795
             L  HSEKLA+ FGL+   +G PIR+FKNLR+C DCH   K  S V+ R + LRD NRF
Sbjct: 555 KMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRF 614

Query: 796 HHFKAGNCSCGDYW 809
           H    G CSCGDYW
Sbjct: 615 HQIVDGICSCGDYW 628



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 184/331 (55%), Gaps = 2/331 (0%)

Query: 119 ELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMY 178
           E   +M + G     +  D +L  C  K  L+ G++ H + IKT +    ++ T L+  Y
Sbjct: 38  EALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFY 97

Query: 179 AKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTF 238
            KC C+ +A  +    P+ KN V+WT MI+ YSQ G+  +A+  F +M     + N+FTF
Sbjct: 98  GKCDCLEDARKVLDEMPE-KNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTF 156

Query: 239 PSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI 298
            ++LT+C   S    G Q+HG I+   ++++++V S+L+DMYAK G +  AR + E    
Sbjct: 157 ATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPE 216

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
            + VS  ++I G+A+ G  +EAL +F ++H+  +  +  TY S+L   +    L++ K  
Sbjct: 217 RDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQA 276

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           H  +++     Y  + N+LIDMY+K GNL  A  +F+ M ++  ISW +++ G + HG  
Sbjct: 277 HCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLG 336

Query: 419 EEALKYFSDMRISG-ICPDHVVVSSILSACA 448
            E L+ F  MR    + PD V + ++LS C+
Sbjct: 337 REVLELFRLMRDEKRVKPDAVTLLAVLSGCS 367



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 113/345 (32%), Positives = 179/345 (51%), Gaps = 13/345 (3%)

Query: 83  LREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRL 142
           L +A+K+ +E P KN  +W+++I  YS  G   EA  +F +M     +P+++T   VL  
Sbjct: 103 LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTS 162

Query: 143 CSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVA 202
           C     L  G+Q HG  +K  +D + FV + L+DMYAK   I EA  +F+  P+ ++ V+
Sbjct: 163 CIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPE-RDVVS 221

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
            T +I GY+Q G   +A+E F  +  EG+  N  T+ S+LTA + ++  D G Q H  +L
Sbjct: 222 CTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVL 281

Query: 263 SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
                    +Q++LIDMY+KCG+L  ARRL +       +SWN+M+VG+++ G  +E L 
Sbjct: 282 RRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLE 341

Query: 323 LFKKMH-ARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLI-----VKTGFEGYKFVNN 375
           LF+ M   + +K D  T  +VL+ C    ++         ++      K G E Y     
Sbjct: 342 LFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHY----G 397

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYE 419
            ++DM  + G +D AF     M  K       SL+  C  H S +
Sbjct: 398 CIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVD 442



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 122/229 (53%), Gaps = 4/229 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D   F  ++++  YA +G+++EA+++F   P ++  + +++I GY+  GLD EA E+F +
Sbjct: 185 DSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHR 244

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           +  EG  P+  T  ++L   S   LL  G+Q H + ++      A +   L+DMY+KC  
Sbjct: 245 LHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGN 304

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSIL 242
           +  A  LF   P+ +  ++W  M+ GYS++G G + +E FR MR E  V+ +  T  ++L
Sbjct: 305 LSYARRLFDNMPE-RTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVL 363

Query: 243 TACAAVSARDFGAQVHGCILSS--GFEANVYVQSALIDMYAKCGDLDSA 289
           + C+     D G  +   +++   G +        ++DM  + G +D A
Sbjct: 364 SGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEA 412



 Score = 41.2 bits (95), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF 90
           L  +L+D +S  G +  A +LF+ M +R   +WN M+  Y+  G  RE  +LF
Sbjct: 291 LQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELF 343


>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Glycine max]
          Length = 618

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 227/570 (39%), Positives = 354/570 (62%), Gaps = 1/570 (0%)

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           +L  CA   +   G   H  I+  G E ++   + LI+MY+KC  +DSAR+      + +
Sbjct: 49  LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKS 108

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
            VSWN++I    +    +EAL L  +M       ++FT  SVL   A    +     +H+
Sbjct: 109 LVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHA 168

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
             +K   +   FV  AL+ +YAK  ++  A  +F  M +K+ ++W+S++ G   +G +EE
Sbjct: 169 FSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEE 228

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
           AL  F + ++ G   D  ++SS +SACA L  L  G+QVHA+  KSG  S++ V +SL+ 
Sbjct: 229 ALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLID 288

Query: 481 VYAKCGCINDANRVFDS-MHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
           +YAKCGCI +A  VF   +  R ++ W A+I G A++ +  EA+  +++M  RG  PD +
Sbjct: 289 MYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDV 348

Query: 540 TFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ 599
           T+V +L ACSH GL E  + YF+ M + + + P   HY+CMID+LGR+G + +A  L+++
Sbjct: 349 TYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIER 408

Query: 600 MVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDA 659
           M     +++W +LL++C+++G++E  E AA  LFE+EP NA  ++ L+N+Y+   KW++ 
Sbjct: 409 MPFNATSSMWGSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKWDEV 468

Query: 660 ARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYV 719
           AR RKL++   +RKE G SW+E  +++H F   +R HP   DIY+K+D +++ +K+  Y 
Sbjct: 469 ARARKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDNLVVELKKLNYK 528

Query: 720 PDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYI 779
            D +  LH+VEE  K++ L +HSEKLA+ FGL+ LP+  PIRI KNLR+CGDCHT MK +
Sbjct: 529 VDTSNDLHDVEENRKQMLLRHHSEKLAITFGLMCLPRDIPIRIIKNLRICGDCHTFMKLV 588

Query: 780 SAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           S    R II+RD+NRFHHFK G CSCG++W
Sbjct: 589 SKSTSREIIVRDTNRFHHFKDGFCSCGEFW 618



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 131/389 (33%), Positives = 207/389 (53%), Gaps = 8/389 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           + D  T N +I  Y+    +  A+K FNE P K+  +W+++I   +    D EA +L  Q
Sbjct: 75  EMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSWNTVIGALTQNAEDREALKLLIQ 134

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           MQ EG   +++T+ +VL  C+ K  +    Q H ++IK   D N FV T L+ +YAKC  
Sbjct: 135 MQREGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVGTALLHVYAKCSS 194

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I +A  +F+  P+ KN V W++M+ GY QNG+  +A+  FR+ ++ G + + F   S ++
Sbjct: 195 IKDASQMFESMPE-KNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDPFMISSAVS 253

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE-YSEIDNEV 302
           ACA ++    G QVH     SGF +N+YV S+LIDMYAKCG +  A  + +   E+ + V
Sbjct: 254 ACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIV 313

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSL 361
            WN+MI GFAR     EA+ LF+KM  R    DD TY  VLN C    +     K    +
Sbjct: 314 LWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLM 373

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSY-- 418
           + +          + +ID+  + G +  A+ +   M      S W SL+  C  +G+   
Sbjct: 374 VRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLASCKIYGNIEF 433

Query: 419 -EEALKYFSDMRISGICPDHVVVSSILSA 446
            E A KY  +M  +    +H+++++I +A
Sbjct: 434 AEIAAKYLFEMEPNN-AGNHILLANIYAA 461



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 204/417 (48%), Gaps = 11/417 (2%)

Query: 111 YGLDIEAFELFWQMQLEGYRPSQYT-------LDNVLRLCSLKGLLQRGEQFHGYAIKTC 163
           YG+ I    +  + + E  +            L  +L+LC+       G   H   I+  
Sbjct: 14  YGIHIRKLTVISEAKPESSKVENVVHIDRVSNLHYLLQLCAKTRSSMGGRACHAQIIRIG 73

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
            +++      L++MY+KC  +  A   F   P  K+ V+W T+I   +QN    +A++  
Sbjct: 74  LEMDILTSNMLINMYSKCSLVDSARKKFNEMP-VKSLVSWNTVIGALTQNAEDREALKLL 132

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
             M+ EG   N+FT  S+L  CA   A     Q+H   + +  ++N +V +AL+ +YAKC
Sbjct: 133 IQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVGTALLHVYAKC 192

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
             +  A ++ E     N V+W+SM+ G+ + GFH+EAL +F+         D F   S +
Sbjct: 193 SSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDPFMISSAV 252

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN-LMQDKDV 402
           +  A    L   K VH++  K+GF    +V+++LIDMYAK G +  A++VF  +++ + +
Sbjct: 253 SACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSI 312

Query: 403 ISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAV 462
           + W ++I+G A H    EA+  F  M+  G  PD V    +L+AC+ + + E GQ+   +
Sbjct: 313 VLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDL 372

Query: 463 FLKSGGCSSLSVDNSLVL-VYAKCGCINDANRVFDSMHTRDVIT-WTALIMGCAQNG 517
            ++    S   +  S ++ +  + G ++ A  + + M      + W +L+  C   G
Sbjct: 373 MVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLASCKIYG 429



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 131/284 (46%), Gaps = 38/284 (13%)

Query: 32  SVKPASDLN----RALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREA 86
           S+K A D N     AL+  ++    I +A Q+FE M +++  TW++M+A Y  +G     
Sbjct: 170 SIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNG----- 224

Query: 87  KKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLK 146
              F+E                       EA  +F   QL G+    + + + +  C+  
Sbjct: 225 ---FHE-----------------------EALLIFRNAQLMGFDQDPFMISSAVSACAGL 258

Query: 147 GLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTM 206
             L  G+Q H  + K+ F  N +V + L+DMYAKC CI EA  +F+   + ++ V W  M
Sbjct: 259 ATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAM 318

Query: 207 ITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-G 265
           I+G++++    +A+  F  M+  G   +  T+  +L AC+ +   + G +    ++    
Sbjct: 319 ISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLMVRQHN 378

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMI 308
              +V   S +ID+  + G +  A  L+E    +   S W S++
Sbjct: 379 LSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLL 422


>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
 gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
          Length = 569

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 234/543 (43%), Positives = 338/543 (62%), Gaps = 8/543 (1%)

Query: 267 EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK 326
           E +    + ++  Y +  +++ A+   E   I +  SWN+MI GFA+     +A  LF  
Sbjct: 35  EPDAVSYNTMLSCYVRNSNMERAQAFFEDMPIKDTPSWNTMITGFAQNQQMDKARDLFLI 94

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
           M  +++     T+ ++++ +    DL++A     L  K  F+       A+I  Y K G 
Sbjct: 95  MPTKNV----VTWNAMISGYVECGDLDSALK---LFEKAPFKSV-VAWTAMITGYMKLGR 146

Query: 387 LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSA 446
           +  A  +F  M +K++++W ++I G   +   E+ +K F  M   GI P+   +SS L  
Sbjct: 147 IGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLG 206

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITW 506
           C+EL+ L+ G+QVH +  KS  C   +   SL+ +Y KCG + D  ++F  +  RDV+TW
Sbjct: 207 CSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTW 266

Query: 507 TALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDK 566
            A+I G AQ+G+GK+AL  +D+M+ +G KPD+ITFV +L AC+HAG  +    YF SM K
Sbjct: 267 NAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAK 326

Query: 567 VYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGE 626
            YG+   PDHY CM+DLLGR+GKL+EA  L+++M  +P A V+  LL ACR+H + E+ E
Sbjct: 327 DYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPHAAVFGTLLGACRIHKNTEMAE 386

Query: 627 RAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQV 686
            A+  L  L+P +A  YVQL+N+Y+   +W+  ARVRK MKS  + K PG SW+E  S  
Sbjct: 387 FASQKLLNLDPASATGYVQLANVYAATKRWDHVARVRKSMKSCKVVKTPGYSWIEVKSMA 446

Query: 687 HIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLA 746
           H F S D+ HP    I+ K+ E+   +K AGYVPD+ FALH+V EE KE  L +HSEKLA
Sbjct: 447 HQFRSGDKFHPELASIHGKLKELEKKMKLAGYVPDLEFALHDVGEEQKEQLLLWHSEKLA 506

Query: 747 VAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCG 806
           +A+GL+ LP G PIR+FKNLRVCGDCH A+KYIS +  R II+RD+ RFHHFK G+CSC 
Sbjct: 507 IAYGLIKLPPGTPIRVFKNLRVCGDCHRAIKYISQIERREIIVRDTTRFHHFKDGHCSCA 566

Query: 807 DYW 809
           DYW
Sbjct: 567 DYW 569



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 181/403 (44%), Gaps = 32/403 (7%)

Query: 32  SVKPASDLNRALVDFSNS-GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF 90
           ++K     N  L   S   G++ EA +LF K+ + D  ++NTM++ Y  +  +  A+  F
Sbjct: 2   TLKTTVTWNSVLAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAFF 61

Query: 91  NETPFKNFFTWSSLIYGYSNYGLDIEAFELF----------WQMQLEGYRPSQYTLDNVL 140
            + P K+  +W+++I G++      +A +LF          W   + GY      LD+ L
Sbjct: 62  EDMPIKDTPSWNTMITGFAQNQQMDKARDLFLIMPTKNVVTWNAMISGYVECG-DLDSAL 120

Query: 141 RLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNH 200
           +L            F     K+     A ++TG    Y K   I  AE LF+  P+ KN 
Sbjct: 121 KL------------FEKAPFKSVVAWTA-MITG----YMKLGRIGLAERLFEKMPE-KNL 162

Query: 201 VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
           V W  MI GY +N      ++ FR M   G++ N  T  S L  C+ +SA   G QVH  
Sbjct: 163 VTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQL 222

Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEA 320
           +  S    +    ++LI MY KCG L+   +L       + V+WN+MI G+A+ G  K+A
Sbjct: 223 VCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKA 282

Query: 321 LSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALID 379
           L LF +M  + +K D  T+ +VL  C  +       K  HS+    G          ++D
Sbjct: 283 LGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAKDYGLVAKPDHYTCMVD 342

Query: 380 MYAKQGNLDCAFMVFNLMQDKD-VISWTSLITGCAYHGSYEEA 421
           +  + G L  A  +   M  K     + +L+  C  H + E A
Sbjct: 343 LLGRAGKLVEAVDLIEKMPFKPHAAVFGTLLGACRIHKNTEMA 385


>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
 gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
 gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
 gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
          Length = 690

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 253/687 (36%), Positives = 389/687 (56%), Gaps = 16/687 (2%)

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
           + ++LR  +    L+ G Q H   +K  F  +  +   L+DMYAKC  +  A  +F   P
Sbjct: 7   IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 66

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGA 255
           + +N V+WT ++ G+  +G   + +  F +MR  G   N+FT  + L AC   +    G 
Sbjct: 67  E-RNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGT--RAGV 123

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           Q+HG  + +GFE +  V ++L+ MY+K      ARR+ +     N  +WNSMI G+A  G
Sbjct: 124 QIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAG 183

Query: 316 FHKEALSLFKKMHAR-DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE--GYKF 372
             +++L +F++M  R D + D+FT+ S+L   +          VH+ +   G        
Sbjct: 184 QGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAI 243

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           +  AL+D+Y K   L  A  VF+ ++ ++ I WT++I G A  G  +EA+  F     SG
Sbjct: 244 LAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG 303

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
           +  D  V+SS+++  A+  ++E G+QVH    K+     +SV NSLV +Y KCG   +A 
Sbjct: 304 VRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAG 363

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
           R F  M  R+V++WTA+I G  ++G G+EA+  +++M   G + D + ++ LL ACSH+G
Sbjct: 364 RRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSG 423

Query: 553 LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
           L +  R YF  + +   ++P  +HYACM+DLLGR+G+L EAK L+  M  EP   VW+ L
Sbjct: 424 LVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTL 483

Query: 613 LSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIR 672
           LSACRVH D+ +G    + L  ++  N + YV LSN+ + AG+W +   +R  M+ +G+R
Sbjct: 484 LSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLR 543

Query: 673 KEPGCSWVETNSQVHIFI-SEDRGHPLRTDIYSKIDEIMLLIKEA-GYVPDMNFALHNVE 730
           K+ GCSW E + +VH F    D  HP   DI   + E+   ++E  GY  D   ALH+V+
Sbjct: 544 KQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALHDVD 603

Query: 731 EEGKEIGLAYHSEKLAVAFGLLTLPQGAP--------IRIFKNLRVCGDCHTAMKYISAV 782
           EE +   L  HSE+LAV   LL    G          +R++KNLRVCGDCH  +K +SAV
Sbjct: 604 EESRVESLREHSERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKGLSAV 663

Query: 783 YLRHIILRDSNRFHHFKAGNCSCGDYW 809
             R +++RD+NRFH F+ G CSC DYW
Sbjct: 664 VRRVVVVRDANRFHRFQNGACSCRDYW 690



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 128/381 (33%), Positives = 205/381 (53%), Gaps = 6/381 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +I  YA  G+L  A ++F+  P +N  +W++L+ G+ ++G   E   LF +M+  G  
Sbjct: 43  NNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTS 102

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+++TL   L+ C   G  + G Q HG  ++T F+ +  V   LV MY+K +   +A  +
Sbjct: 103 PNEFTLSATLKACG--GGTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRV 160

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILTACAAVS 249
           F + P  +N   W +MI+GY+  G G  ++  FR+M R    + ++FTF S+L AC+ + 
Sbjct: 161 FDVIPS-RNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLG 219

Query: 250 ARDFGAQVHGCILSSGFE--ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           A   GAQVH  +   G    +N  +  AL+D+Y KC  L  A ++ +  E  N + W ++
Sbjct: 220 AAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTV 279

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           IVG A++G  KEA+ LF++  +  ++ D     SV+  FA    +   K VH    KT  
Sbjct: 280 IVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPA 339

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
                V N+L+DMY K G    A   F  M  ++V+SWT++I G   HG   EA+  F +
Sbjct: 340 GLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEE 399

Query: 428 MRISGICPDHVVVSSILSACA 448
           M+  G+  D V   ++LSAC+
Sbjct: 400 MQEEGVEADEVAYLALLSACS 420



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/453 (24%), Positives = 205/453 (45%), Gaps = 41/453 (9%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +V +S      +A ++F+ +  R+  TWN+MI+ YA++G+ R++  +F E   ++  
Sbjct: 142 NSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRH-- 199

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH-GY 158
                                         +P ++T  ++L+ CS  G  + G Q H   
Sbjct: 200 ----------------------------DEQPDEFTFASLLKACSGLGAAREGAQVHAAM 231

Query: 159 AIKTCFDL-NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
           A++      NA +   L+D+Y KC  +  A  +F    + +N + WTT+I G++Q G   
Sbjct: 232 AVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGL-ERRNAIQWTTVIVGHAQEGQVK 290

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           +A+  FR     GV ++     S++   A  +  + G QVH     +    +V V ++L+
Sbjct: 291 EAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLV 350

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
           DMY KCG    A R        N VSW +MI G  + G  +EA+ LF++M    ++ D+ 
Sbjct: 351 DMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEV 410

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA-LIDMYAKQGNL-DCAFMVFN 395
            Y ++L+  + +  ++  +   S I +      K  + A ++D+  + G L +   ++ +
Sbjct: 411 AYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILS 470

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSD--MRISGICP-DHVVVSSILSACAELTV 452
           +  +  V  W +L++ C  H       +   D  + + G  P ++V++S+IL+   E   
Sbjct: 471 MPMEPTVGVWQTLLSACRVHKDVAVG-REVGDVLLAVDGDNPVNYVMLSNILAEAGEWRE 529

Query: 453 LE--FGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            +   G        K GGCS   VD  +   Y 
Sbjct: 530 CQGIRGAMRRKGLRKQGGCSWTEVDKEVHFFYG 562



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 67/110 (60%)

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
           +++ +L A A  + L  G Q+HA  +K G  S   ++N+L+ +YAKCG ++ A  VFD M
Sbjct: 6   MIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGM 65

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
             R+V++WTAL++G   +G+ +E L+ + +M   GT P+  T    L AC
Sbjct: 66  PERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKAC 115


>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 640

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 247/660 (37%), Positives = 368/660 (55%), Gaps = 44/660 (6%)

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKCKC---IFEAEYLFKMFPDGKNHVAWTTMITGY 210
           Q H   IKT  D N FV+  L+     C     +  A  +F   P     + W TMI  Y
Sbjct: 21  QIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFI-WNTMIRAY 79

Query: 211 SQNGYGFKAIECFRDMR-VEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
             +    +++  F  MR  E +  + ++   ++ AC  +     G ++H  +L  G  ++
Sbjct: 80  LNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSD 139

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA 329
           ++V++ALI+MYAK GD++ AR +L+     + V +N ++  + R G    A  LF +M  
Sbjct: 140 LFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPE 199

Query: 330 RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDC 389
           RD+                                          N +I  +A  G++  
Sbjct: 200 RDL---------------------------------------VSWNTMIHGHASLGDVGT 220

Query: 390 AFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE 449
           A  +F+   ++D+ISW+S+I   A      EAL+ F +M+++ + PD V + S+LSAC +
Sbjct: 221 AKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGD 280

Query: 450 LTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTAL 509
           +  L  G+ +H    ++     L +  SLV +YAKCG I+++ RVF+ M+ RDV  W+A+
Sbjct: 281 VGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAM 340

Query: 510 IMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG 569
           IMG A +G G+ AL  + +M++   KP+ +TF+G+L ACSH GL +    YF SM KVY 
Sbjct: 341 IMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYD 400

Query: 570 IKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAA 629
           + P  +HY C++D+LGR+G+L EA  L+  M   PDA VW+ALL ACR++ ++E+ E A 
Sbjct: 401 VSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEAT 460

Query: 630 NNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIF 689
            NL ELEP     YV LSN+YS A +W+    VR++MK+  I+K PG S +E ++ VH F
Sbjct: 461 VNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEF 520

Query: 690 ISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAF 749
           ++ D+ HP    I   + EI   +K  GY P     L + +E+ KE  LA+HSEKLA+AF
Sbjct: 521 VAGDQSHPESKKILRMLSEITARLKANGYAPLTASVLQDFDEKEKENALAHHSEKLAIAF 580

Query: 750 GLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           GLL+   G+ IRI KNLRVC DCH A+K IS  Y R II+RD NRFHHF  G+CSC DYW
Sbjct: 581 GLLSTAPGSTIRIVKNLRVCDDCHIAIKLISRTYKRRIIVRDRNRFHHFVNGSCSCKDYW 640



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 217/476 (45%), Gaps = 78/476 (16%)

Query: 76  AYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRP-SQY 134
           A +++  L  A+ +F+E P  + F W+++I  Y N     E+  LF+QM+ +   P   Y
Sbjct: 47  ACSSANDLLYARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSY 106

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK------CKCIFE-- 186
           +L  V++ C        G++ H   +K     + FV T L++MYAK       + I +  
Sbjct: 107 SLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEM 166

Query: 187 ------------AEY-----------LFKMFPDGKNHVAWTTMITG-------------- 209
                       AEY           LF   P+ ++ V+W TMI G              
Sbjct: 167 AHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPE-RDLVSWNTMIHGHASLGDVGTAKKLF 225

Query: 210 -----------------YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
                            Y++     +A+  F +M++  V  ++ T  S+L+AC  V A  
Sbjct: 226 DRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALG 285

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G  +H CI  +  E ++ + ++L+DMYAKCGD+D++ R+       +  +W++MI+G A
Sbjct: 286 MGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLA 345

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
             GF + AL  F KM + DIK +D T+  VL+   S+I L +    +   +   ++    
Sbjct: 346 NHGFGELALDHFSKMISEDIKPNDVTFIGVLSA-CSHIGLVDEGWTYFTSMSKVYDVSPK 404

Query: 373 VNN--ALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALKYFSDM- 428
           + +   ++D+  + G L  A  +   M    D I W +L+  C  + + E A +   ++ 
Sbjct: 405 IEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLL 464

Query: 429 ----RISGICPDHVVVSSILSACAEL-TVLEFGQQVHAVFL-KSGGCSSLSVDNSL 478
                + G   ++V++S+I S   E   V+   + +  + + K  G SS+ VDN++
Sbjct: 465 ELEPHVDG---NYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAV 517



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 137/257 (53%), Gaps = 4/257 (1%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  L ++   GEI+ A  LF++M +RD  +WNTMI  +A+ G +  AKKLF+ T  ++  
Sbjct: 175 NVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLI 234

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           +WSS+I  Y+      EA  LF +MQL    P + T+ +VL  C   G L  G+  H   
Sbjct: 235 SWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECI 294

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
            +   +++  + T LVDMYAKC  I  +  +F    + ++  AW+ MI G + +G+G  A
Sbjct: 295 ERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGM-NNRDVFAWSAMIMGLANHGFGELA 353

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ--SALI 277
           ++ F  M  E ++ N  TF  +L+AC+ +   D G   +   +S  ++ +  ++    ++
Sbjct: 354 LDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEG-WTYFTSMSKVYDVSPKIEHYGCVV 412

Query: 278 DMYAKCGDLDSARRLLE 294
           D+  + G L  A  L++
Sbjct: 413 DILGRAGRLQEAMELIK 429



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 148/341 (43%), Gaps = 23/341 (6%)

Query: 342 VLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMY---AKQGNLDCAFMVFNLMQ 398
           V++   +   LN    +H+LI+KT  +G  FV   L+      +   +L  A  VF+ + 
Sbjct: 6   VMSLLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIP 65

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP-DHVVVSSILSACAELTVLEFGQ 457
             D   W ++I       + +E++  F  MR     P D   +S ++ AC  L     GQ
Sbjct: 66  SPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQ 125

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
           ++H   LK G  S L V+ +L+ +YAK G I  A  + D M   D++ +  L+    + G
Sbjct: 126 KLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVG 185

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY 577
           +   A   +D+M  R    D +++  ++   +  G    A+  F+   +   I      +
Sbjct: 186 EINLAHDLFDRMPER----DLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLIS-----W 236

Query: 578 ACMIDLLGRSGKLIEAKALLDQMVGE---PDATVWKALLSACRVHGDLELG----ERAAN 630
           + MI    ++ +  EA  L  +M      PD     ++LSAC   G L +G    E    
Sbjct: 237 SSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIER 296

Query: 631 NLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
           N  E++         L +MY+  G  +++ RV   M +R +
Sbjct: 297 NRIEIDLKLG---TSLVDMYAKCGDIDNSLRVFNGMNNRDV 334


>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
 gi|194695290|gb|ACF81729.1| unknown [Zea mays]
          Length = 539

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 215/534 (40%), Positives = 334/534 (62%)

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           LI  Y K GDL++AR+L +     N  +WN+M+ G    G ++E+L  F  M    ++ D
Sbjct: 6   LIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPD 65

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
           ++   S+  C A   D+ + + VH+ +V++G +    V ++L  MY + G L        
Sbjct: 66  EYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALR 125

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
            +   +++S  + I+G   +G  E AL++F  MR +G+  + V   S +++C++L  L  
Sbjct: 126 ALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQ 185

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
           GQQ+HA+ +K+G    + V  SLV +Y++CGC+ D+ RV       D++  +A+I     
Sbjct: 186 GQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGF 245

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
           +G G++A+  + QM+A G +P+ +TF+ LL+ACSH+GL +     FE M K YG++P   
Sbjct: 246 HGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVK 305

Query: 576 HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
           HY C++DLLGRSG L EA+ L+  M  +PD  +WK LLSAC+     ++ ER A  + EL
Sbjct: 306 HYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIEL 365

Query: 636 EPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG 695
           +P ++  YV LSN+ +T+ +WED ++VR+ M+ + +RKEPG SWVE   Q+H F + D  
Sbjct: 366 DPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDES 425

Query: 696 HPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLP 755
           H  + +I   ++E+M  I++ GY PDM+   H++E+E KE+ LA+HSEKLA+AF  L+LP
Sbjct: 426 HSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLP 485

Query: 756 QGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +G PIR+ KNLRVC DCH A+K +S V  R I++RD +RFHHFK G CSCGDYW
Sbjct: 486 EGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 539



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 192/357 (53%), Gaps = 5/357 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
            +WN +I  Y  +G L  A+KLF+E P +N  TW++++ G +N GL+ E+   F+ M+ E
Sbjct: 1   MSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRRE 60

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G +P +Y L ++ R C+    +  G Q H Y +++  D +  V + L  MY +C  + + 
Sbjct: 61  GMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDG 120

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
           E   +  P   N V+  T I+G +QNG    A+E F  MR  GVE+N  TF S +T+C+ 
Sbjct: 121 EAALRALPS-LNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSD 179

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDL-DSARRLLEYSEIDNEVSWNS 306
           ++A   G Q+H   + +G +  V V ++L+ MY++CG L DS R  LEYS  D  V  ++
Sbjct: 180 LAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTD-LVLCSA 238

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT- 365
           MI  +   G  ++A+ LFK+M A   + ++ T+ ++L   + +   +   +   L+ KT 
Sbjct: 239 MISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTY 298

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           G +        ++D+  + G L+ A  ++ ++    D + W +L++ C     ++ A
Sbjct: 299 GLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMA 355



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 161/347 (46%), Gaps = 3/347 (0%)

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
           L+  Y K   +  A  LF   P  +N   W  M+ G + +G   +++  F  MR EG++ 
Sbjct: 6   LIGGYVKNGDLETARKLFDEMP-ARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQP 64

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
           +++   S+   CA +     G QVH  ++ SG + ++ V S+L  MY +CG L      L
Sbjct: 65  DEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAAL 124

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
                 N VS N+ I G  + G  + AL  F  M    ++ +  T+ S +   +    L 
Sbjct: 125 RALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALA 184

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
             + +H+L +KTG +    V  +L+ MY++ G L  +  V       D++  +++I+   
Sbjct: 185 QGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYG 244

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SL 472
           +HG  ++A+  F  M  +G  P+ V   ++L AC+   + + G     +  K+ G   S+
Sbjct: 245 FHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSV 304

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGK 518
                +V +  + GC+N+A  +  SM  + D + W  L+  C    K
Sbjct: 305 KHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKK 351



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 134/273 (49%), Gaps = 15/273 (5%)

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           N LI  Y K G+L+ A  +F+ M  ++V +W +++ G    G  EE+L +F  MR  G+ 
Sbjct: 4   NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 63

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           PD   + S+   CA L  +  G+QVHA  ++SG    + V +SL  +Y +CG + D    
Sbjct: 64  PDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAA 123

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH-AGL 553
             ++ + ++++    I G  QNG  + AL+F+  M   G + + +TFV  + +CS  A L
Sbjct: 124 LRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAAL 183

Query: 554 AENARWYFESMDKVYGIKPGPDH----YACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
           A+  + +         IK G D        ++ +  R G L +++ +  +  G  D  + 
Sbjct: 184 AQGQQIH------ALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSG-TDLVLC 236

Query: 610 KALLSACRVHGDLELGERAANNLFELEPMNAMP 642
            A++SA   HG    G++A     ++    A P
Sbjct: 237 SAMISAYGFHGH---GQKAVGLFKQMMAAGAEP 266



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 138/295 (46%), Gaps = 9/295 (3%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           DRD    +++   Y   G LR+ +      P  N  + ++ I G +  G    A E F  
Sbjct: 98  DRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCL 157

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+  G   +  T  + +  CS    L +G+Q H  AIKT  D    V+T LV MY++C C
Sbjct: 158 MRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGC 217

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + ++E +   +  G + V  + MI+ Y  +G+G KA+  F+ M   G E N+ TF ++L 
Sbjct: 218 LGDSERVCLEY-SGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLY 276

Query: 244 ACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE- 301
           AC+    +D G      +  + G + +V   + ++D+  + G L+ A  L+    +  + 
Sbjct: 277 ACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDG 336

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
           V W +++     Q    +   + +++  R I++D     S +    SNI   +++
Sbjct: 337 VIWKTLLSACKTQ----KKFDMAERIAERVIELDPHDSASYV--LLSNIRATSSR 385


>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
          Length = 730

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 246/637 (38%), Positives = 364/637 (57%), Gaps = 15/637 (2%)

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A  LF   P+ +N V WT ++TGY+ N      +E F +M   G   + +T  + L AC
Sbjct: 91  DARRLFDGMPE-RNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNAC 149

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
            A    D G QVHG  +  G E+   + ++L  +YAK G LDSA R        N ++W 
Sbjct: 150 LASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWT 209

Query: 306 SMIVGFARQGFHKE-ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           +MI   A      E  +SLF  M    +  ++FT  SV++   + +DLN  K V +   K
Sbjct: 210 TMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFK 269

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY---------- 414
            G E    V N+ + +Y ++G  D A  +F  M+D  +I+W ++I+G A           
Sbjct: 270 IGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQ 329

Query: 415 -HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
                 +AL  F D++ S + PD    SSILS C+ +  LE G+Q+HA  +KSG  S + 
Sbjct: 330 ARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVV 389

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
           V+++LV +Y KCGCI DAN+ F  M TR  +TWT++I G +Q+G+ +EA+Q +++M   G
Sbjct: 390 VNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAG 449

Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
            +P+ ITFV LL ACS+AGL E A  YF+ M K Y I+P  DHY CMID+  R G++ +A
Sbjct: 450 VRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDA 509

Query: 594 KALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTA 653
            + + +   EP+  +W +L++ CR HG++EL   AA+ L EL+P     Y+ L NMY + 
Sbjct: 510 FSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYIST 569

Query: 654 GKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLI 713
            +W+D ARVRKLMK   +      SW+    +V+ F + DR HP  T++Y  ++ ++   
Sbjct: 570 ERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKA 629

Query: 714 KEAGYVPDMNFALHNVEEEGKEIG--LAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGD 771
           K  GY P  N  L + E++ K     L +HSE+LAVA GLL  P GA +R+ KN+ +C D
Sbjct: 630 KAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNITMCRD 689

Query: 772 CHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDY 808
           CH+++K  S +  R II+RDS R H FK G CSCGD+
Sbjct: 690 CHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 726



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 143/480 (29%), Positives = 253/480 (52%), Gaps = 24/480 (5%)

Query: 84  REAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLC 143
           R+A++LF+  P +N  TW++L+ GY+         E+F +M   G  PS YTL   L  C
Sbjct: 90  RDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNAC 149

Query: 144 SLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAW 203
                +  G+Q HGYAIK   +    +   L  +YAK   +  A   F   P+ KN + W
Sbjct: 150 LASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPE-KNVITW 208

Query: 204 TTMITGYSQNGYGFK-AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
           TTMI+  +++    +  +  F DM ++GV  N+FT  S+++ C      + G QV     
Sbjct: 209 TTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSF 268

Query: 263 SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR--------- 313
             G E N+ V+++ + +Y + G+ D A RL E  E  + ++WN+MI G+A+         
Sbjct: 269 KIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDL 328

Query: 314 ----QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
               +GF  +AL++F+ +    +K D FT+ S+L+  ++ + L   + +H+  +K+GF  
Sbjct: 329 QARSRGF--QALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLS 386

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
              VN+AL++MY K G +  A   F  M  +  ++WTS+I+G + HG  +EA++ F +MR
Sbjct: 387 DVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMR 446

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLVLVYAKCGC 487
           ++G+ P+ +   S+LSAC+   ++E  +  +   +K   C    VD+   ++ ++ + G 
Sbjct: 447 LAGVRPNEITFVSLLSACSYAGLVEEAEH-YFDMMKKEYCIEPVVDHYGCMIDMFVRLGR 505

Query: 488 INDA-NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI-TFVGLL 545
           + DA + +  +    +   W++L+ GC  +G  + A    D++L    KP  I T++ LL
Sbjct: 506 VEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLE--LKPKGIETYILLL 563



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 185/365 (50%), Gaps = 15/365 (4%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE-AFELFWQMQLEGY 129
           N++ + YA  G L  A + F   P KN  TW+++I   +     +E    LF  M ++G 
Sbjct: 178 NSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGV 237

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
            P+++TL +V+ LC  +  L  G+Q   ++ K   + N  V    + +Y +     EA  
Sbjct: 238 MPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMR 297

Query: 190 LFKMFPDGKNHVAWTTMITGYSQ-----------NGYGFKAIECFRDMRVEGVESNQFTF 238
           LF+   D  + + W  MI+GY+Q              GF+A+  FRD++   ++ + FTF
Sbjct: 298 LFEQMEDA-SIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTF 356

Query: 239 PSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI 298
            SIL+ C+A+ A + G Q+H   + SGF ++V V SAL++MY KCG +  A +       
Sbjct: 357 SSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPT 416

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
              V+W SMI G+++ G  +EA+ LF++M    ++ ++ T+ S+L+  +    +  A+  
Sbjct: 417 RTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHY 476

Query: 359 HSLIVKT-GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHG 416
             ++ K    E        +IDM+ + G ++ AF        + +   W+SL+ GC  HG
Sbjct: 477 FDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHG 536

Query: 417 SYEEA 421
           + E A
Sbjct: 537 NMELA 541



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 154/325 (47%), Gaps = 24/325 (7%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  +   GE DEA +LFE+M D    TWN MI+ YA   ++ ++ K   +   + F 
Sbjct: 280 NSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYA---QIMDSAKDDLQARSRGF- 335

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
                           +A  +F  ++    +P  +T  ++L +CS    L++GEQ H   
Sbjct: 336 ----------------QALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQT 379

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           IK+ F  +  V + LV+MY KC CI +A   F   P  +  V WT+MI+GYSQ+G   +A
Sbjct: 380 IKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPT-RTFVTWTSMISGYSQHGQPQEA 438

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALID 278
           I+ F +MR+ GV  N+ TF S+L+AC+     +        +      E  V     +ID
Sbjct: 439 IQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMID 498

Query: 279 MYAKCGDLDSARRLLEYSEID-NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
           M+ + G ++ A   ++ +  + NE  W+S++ G    G  + A     K+     K  + 
Sbjct: 499 MFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIE- 557

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLI 362
           TY  +LN + S     +   V  L+
Sbjct: 558 TYILLLNMYISTERWQDVARVRKLM 582


>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 776

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 254/691 (36%), Positives = 384/691 (55%), Gaps = 22/691 (3%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           +L  C   G L      HG+ +KT    + FV T LV++Y +C    +A  LF   PD K
Sbjct: 82  LLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMPD-K 140

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           N V WT +ITG++ N     A+E F +M   G   + +T   +L+AC+A    D G QVH
Sbjct: 141 NVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQVH 200

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR-QGFH 317
           G  +  G +    + ++L  +Y K GDL+S  R  + +   N ++W +MI   A  + + 
Sbjct: 201 GYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDENYL 260

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
              LSLF  M    +  ++FT  SV++   + +D++  K V +   K G E    V N+ 
Sbjct: 261 DLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNST 320

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA---------YHGSYE--EALKYFS 426
           + +Y ++G  D A  +F  M    +I+W ++I+G A          H      +ALK F 
Sbjct: 321 MYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFR 380

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
           D+  S + PD    SSILS C+ +  LE G+Q+HA  +K+G  S + V+++LV +Y KCG
Sbjct: 381 DLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCG 440

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
            I  A + F  M TR  +TWT++I G +Q+G+ ++A+Q ++ M+  G +P+ ITFV LL 
Sbjct: 441 SIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLS 500

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ACS+AGL E A  YF+ M   Y I+P  DHY CM+D+  R G+L +A + + +   EP+ 
Sbjct: 501 ACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTGFEPNE 560

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
            +W +L++ CR HG++EL   AA+ L EL+P     YV L NMY + G+W D ARVRKL 
Sbjct: 561 AIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYVLLLNMYISTGRWRDVARVRKLA 620

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFA- 725
           K   +      SW+    +V+ F ++D  HP  T++Y  ++ ++   K  GY P  N   
Sbjct: 621 KHEDVGVLRDRSWIAIRDKVYFFRADDMTHPQATELYQLLENLLEKAKAVGYEPYQNAPE 680

Query: 726 LHNVEEEGKEIGLA--------YHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMK 777
           L    +EG +   A        +HSE+LAVA GLL  P GA +R+ KN+ +C DCH+++K
Sbjct: 681 LLFDSKEGDDDKPAAAAGSLIKHHSERLAVALGLLETPPGATVRVTKNITMCRDCHSSIK 740

Query: 778 YISAVYLRHIILRDSNRFHHFKAGNCSCGDY 808
           Y S +  R I++RDS R H FK G CSCGD+
Sbjct: 741 YFSLLANREIVVRDSKRLHKFKDGRCSCGDF 771



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 155/508 (30%), Positives = 264/508 (51%), Gaps = 24/508 (4%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G + +  +  D F   +++  Y      R+A++LF+  P KN  TW++LI G++      
Sbjct: 100 GHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMPDKNVVTWTALITGHTLNSEPA 159

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
            A E+F +M   G  PS YTL  +L  CS    +  G+Q HGY+IK   D    +   L 
Sbjct: 160 LALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLC 219

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQN-GYGFKAIECFRDMRVEGVESN 234
            +Y K   +      FK  PD KN + WTTMI+  +++  Y    +  F DM   GV  N
Sbjct: 220 RLYCKSGDLESGLRAFKGTPD-KNVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPN 278

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
           +FT  S+++ C A      G QV       G EAN+ V+++ + +Y + G+ D A RL E
Sbjct: 279 EFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFE 338

Query: 295 YSEIDNEVSWNSMIVGFAR-------------QGFHKEALSLFKKMHARDIKIDDFTYPS 341
             +  + ++WN+MI G+A+             +GF  +AL LF+ +   ++K D FT+ S
Sbjct: 339 EMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGF--QALKLFRDLVRSELKPDLFTFSS 396

Query: 342 VLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
           +L+  ++ + L   + +H+  +KTG      VN+AL++MY K G+++CA   F  M  + 
Sbjct: 397 ILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRT 456

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
            ++WTS+I+G + HG  ++A++ F DM +SG  P+ +   S+LSAC+   ++E  ++   
Sbjct: 457 PVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSACSYAGLVEEAERYFD 516

Query: 462 VFLKSGGCSSLSVDN--SLVLVYAKCGCINDA-NRVFDSMHTRDVITWTALIMGCAQNGK 518
           +         L VD+   +V ++ + G ++DA + +  +    +   W++L+ GC  +G 
Sbjct: 517 MMRNEYHIEPL-VDHYGCMVDMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGN 575

Query: 519 GKEALQFYDQMLARGTKPDYI-TFVGLL 545
            + A    D++L    KP  I T+V LL
Sbjct: 576 MELAFYAADRLLE--LKPKVIETYVLLL 601



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 192/404 (47%), Gaps = 48/404 (11%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +  SG+++   + F+   D++  TW TMI++ A                           
Sbjct: 222 YCKSGDLESGLRAFKGTPDKNVITWTTMISSCAED------------------------- 256

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
               NY LD+    LF  M   G  P+++TL +V+ LC  +  +  G+Q   +  K   +
Sbjct: 257 ---ENY-LDL-GLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCE 311

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ-----------NG 214
            N  V    + +Y +     EA  LF+   D  + + W  MI+GY+Q             
Sbjct: 312 ANLPVKNSTMYLYLRKGETDEAMRLFEEM-DSSSIITWNAMISGYAQIMDSAKDDLHARS 370

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQS 274
            GF+A++ FRD+    ++ + FTF SIL+ C+A+ A + G Q+H   + +G  ++V V S
Sbjct: 371 RGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNS 430

Query: 275 ALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKI 334
           AL++MY KCG ++ A +          V+W SMI G+++ G  ++A+ LF+ M     + 
Sbjct: 431 ALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARP 490

Query: 335 DDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN--ALIDMYAKQGNLDCAFM 392
           ++ T+ S+L+  +    +  A+    ++ +  +     V++   ++DM+ + G LD AF 
Sbjct: 491 NEITFVSLLSACSYAGLVEEAERYFDMM-RNEYHIEPLVDHYGCMVDMFVRLGRLDDAFS 549

Query: 393 VFNLMQ-DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
                  + +   W+SL+ GC  HG+ E  L +++  R+  + P
Sbjct: 550 FIKRTGFEPNEAIWSSLVAGCRSHGNME--LAFYAADRLLELKP 591



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 44/204 (21%)

Query: 39  LNRALVDFSNS-GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           +N ALV+  N  G I+ A + F +M  R   TW +MI+ Y+  GR ++A +LF +     
Sbjct: 428 VNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFED----- 482

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF-- 155
                                     M L G RP++ T  ++L  CS  GL++  E++  
Sbjct: 483 --------------------------MVLSGARPNEITFVSLLSACSYAGLVEEAERYFD 516

Query: 156 ---HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
              + Y I+   D        +VDM+ +   + +A    K      N   W++++ G   
Sbjct: 517 MMRNEYHIEPLVDHYGC----MVDMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRS 572

Query: 213 NG---YGFKAIECFRDMRVEGVES 233
           +G     F A +   +++ + +E+
Sbjct: 573 HGNMELAFYAADRLLELKPKVIET 596


>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 232/595 (38%), Positives = 355/595 (59%), Gaps = 22/595 (3%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           T+ S+L  CA + +   G ++H  I S+  E +  + S L+ MY  CGDL   RR+ +  
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKI--------------DDFTYPSV 342
             +    WN ++ G+A+ G  +E+LSLFK+M    I+               D  ++ S+
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222

Query: 343 LNCFASN----IDLNNAKSVHSLIVKTGFEGYKFV----NNALIDMYAKQGNLDCAFMVF 394
           ++ + SN      L+  + +  L + T       V    NN L+DMY+K GNL+ A  VF
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVF 282

Query: 395 NLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLE 454
             M ++ V+SWTS+I G A  G  + +++ F +M    + P+ + ++ IL ACA L  LE
Sbjct: 283 ETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALE 342

Query: 455 FGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCA 514
            GQ++H   L++G      V N+LV +Y KCG +  A  +FD +  +D+++WT +I G  
Sbjct: 343 RGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYG 402

Query: 515 QNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
            +G G EA+  +++M   G +PD ++F+ +L+ACSH+GL +    +F  M     I+P  
Sbjct: 403 MHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKS 462

Query: 575 DHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFE 634
           +HYAC++DLL R+G L +A   +  M  EPDAT+W ALL  CR++ D++L E+ A ++FE
Sbjct: 463 EHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFE 522

Query: 635 LEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDR 694
           LEP N   YV L+N+Y+ A KWE+  ++R+ +  RG+RK PGCSW+E   +VHIF++ D 
Sbjct: 523 LEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDS 582

Query: 695 GHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTL 754
            HPL   I   + +    +KE G+ P M +AL   ++  KE+ L  HSEK+A+AFG+L+L
Sbjct: 583 SHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSL 642

Query: 755 PQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           P G  +R+ KNLRVCGDCH   K++S +  R IILRDSNRFHHFK G+CSC  +W
Sbjct: 643 PPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 697



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 202/433 (46%), Gaps = 74/433 (17%)

Query: 18  KIIGPARYTHNV--GNSVKPASDLNRALV-DFSNSGEIDEAGQLFEKMSDRDGFTWNTMI 74
           K I   R  H++   N V+    L   LV  +   G++ E  ++F+K+++   F WN ++
Sbjct: 115 KSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLM 174

Query: 75  AAYANSGRLRE------------------AKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
             YA  G  RE                  A+KLF+E   ++  +W+S+I GY + GL  +
Sbjct: 175 NGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEK 234

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
             +LF QM L G      T+ +V                    +  C          L+D
Sbjct: 235 GLDLFEQMLLLGINTDLATMVSV-----------------ELTLNNC----------LLD 267

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           MY+K   +  A  +F+   + ++ V+WT+MI GY++ G    ++  F +M  E +  N  
Sbjct: 268 MYSKSGNLNSAIQVFETMGE-RSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSI 326

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           T   IL ACA+++A + G ++HG IL +GF  + +V +AL+DMY KCG L  AR L +  
Sbjct: 327 TMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMI 386

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              + VSW  MI G+   G+  EA++ F +M    I+ D+ ++ S+L   +         
Sbjct: 387 PEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACS--------- 437

Query: 357 SVHSLIVKTGFEGYKFVNN------------ALIDMYAKQGNLDCAFMVFNLMQ-DKDVI 403
             HS ++  G+  +  + N             ++D+ A+ GNL  A+    +M  + D  
Sbjct: 438 --HSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDAT 495

Query: 404 SWTSLITGC-AYH 415
            W +L+ GC  YH
Sbjct: 496 IWGALLCGCRIYH 508



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 217/469 (46%), Gaps = 60/469 (12%)

Query: 70  WNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGY 129
           +N  I  +   G LR A +L N++P  +                          ++L  Y
Sbjct: 71  YNIEICRFCELGNLRRAMELINQSPKPD--------------------------LELRTY 104

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
                   +VL+LC+    +Q G + H        +++  + + LV MY  C  + E   
Sbjct: 105 -------CSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRR 157

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV--------------ESNQ 235
           +F    + K  + W  ++ GY++ G   +++  F+ MR  G+              + + 
Sbjct: 158 IFDKVANEKVFL-WNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDV 216

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEAN--------VYVQSALIDMYAKCGDLD 287
            ++ S+++   +    + G  +   +L  G   +        + + + L+DMY+K G+L+
Sbjct: 217 ISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLN 276

Query: 288 SARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFA 347
           SA ++ E     + VSW SMI G+AR+G    ++ LF +M   D+  +  T   +L   A
Sbjct: 277 SAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACA 336

Query: 348 SNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTS 407
           S   L   + +H  I++ GF   + V NAL+DMY K G L  A ++F+++ +KD++SWT 
Sbjct: 337 SLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTV 396

Query: 408 LITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG 467
           +I G   HG   EA+  F++MR SGI PD V   SIL AC+   +L+ G     + +++ 
Sbjct: 397 MIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNM-MRNN 455

Query: 468 GCSSLSVDN--SLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
            C     ++   +V + A+ G ++ A +    M    D   W AL+ GC
Sbjct: 456 CCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGC 504



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 169/368 (45%), Gaps = 33/368 (8%)

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           ++Y  C  + ++  +L    ID +++ +N  I  F   G  + A+ L  +    D+++  
Sbjct: 46  NLYHSCATIGTS--VLPSETIDCKITDYNIEICRFCELGNLRRAMELINQSPKPDLELR- 102

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
            TY SVL   A    + + + +HS+I     E    + + L+ MY   G+L     +F+ 
Sbjct: 103 -TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDK 161

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI------------CPDHVVVS--S 442
           + ++ V  W  L+ G A  G++ E+L  F  MR  GI              D  V+S  S
Sbjct: 162 VANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNS 221

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCS--------SLSVDNSLVLVYAKCGCINDANRV 494
           ++S      + E G  +    L  G  +         L+++N L+ +Y+K G +N A +V
Sbjct: 222 MISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQV 281

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC-SHAGL 553
           F++M  R V++WT++I G A+ G    +++ + +M      P+ IT   +L AC S A L
Sbjct: 282 FETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAAL 341

Query: 554 AENARWYFESMDKVYGIKPGPDHYA-CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
                 +   +   + +     H A  ++D+  + G L  A+ L D M+ E D   W  +
Sbjct: 342 ERGQEIHGHILRNGFSLD---RHVANALVDMYLKCGALGLARLLFD-MIPEKDLVSWTVM 397

Query: 613 LSACRVHG 620
           ++   +HG
Sbjct: 398 IAGYGMHG 405


>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/683 (35%), Positives = 384/683 (56%), Gaps = 48/683 (7%)

Query: 174  LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
            L+ +Y K   +  A  LF   P  +N   WT +I+G+S+ G      + FR+MR +G   
Sbjct: 330  LLTLYVKSSNMDHARKLFDEIPQ-RNTQTWTILISGFSRAGSSEVVFKLFREMRAKGACP 388

Query: 234  NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
            NQ+T  S+   C+       G  VH  +L +G +A+V + ++++D+Y KC   + A R+ 
Sbjct: 389  NQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVF 448

Query: 294  EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI--------------------- 332
            E     + VSWN MI  + R G  +++L +F+++  +D+                     
Sbjct: 449  ELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALE 508

Query: 333  ----------KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYA 382
                      +    T+   L   +S   +   + +H +++K GF    F+ ++L++MY 
Sbjct: 509  QLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYC 568

Query: 383  KQGNLDCAFMVF-----NLMQDKD-----------VISWTSLITGCAYHGSYEEALKYFS 426
            K G +D A +V      + +++ +           ++SW  +++G  ++G YE+ LK F 
Sbjct: 569  KCGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFR 628

Query: 427  DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
             M    +  D   V++I+SACA   +LEFG+ VHA   K G      V +SL+ +Y+K G
Sbjct: 629  LMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSG 688

Query: 487  CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
             ++DA  +F   +  +++ WT++I GCA +G+GK+A+  +++ML +G  P+ +TF+G+L 
Sbjct: 689  SLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLN 748

Query: 547  ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
            AC HAGL E    YF  M   Y I PG +H   M+DL GR+G L E K  + +       
Sbjct: 749  ACCHAGLLEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTETKNFIFENGISHLT 808

Query: 607  TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
            +VWK+ LS+CR+H ++E+G+  +  L ++ P +   YV LSNM ++  +W++AARVR LM
Sbjct: 809  SVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLM 868

Query: 667  KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFAL 726
              RGI+K+PG SW++   Q+H FI  DR HP   +IYS +D ++  +KE GY  D+   +
Sbjct: 869  HQRGIKKQPGQSWIQLKDQIHTFIMGDRSHPQDEEIYSYLDILIGRLKEIGYSFDVKLVM 928

Query: 727  HNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRH 786
             +VEEE  E+ +++HSEKLAV FG++      PIRI KNLR+C DCH  +KY S +  R 
Sbjct: 929  QDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIRIIKNLRICTDCHNFIKYASQLLDRE 988

Query: 787  IILRDSNRFHHFKAGNCSCGDYW 809
            IILRD +RFHHFK G CSCGDYW
Sbjct: 989  IILRDIHRFHHFKHGGCSCGDYW 1011



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 204/438 (46%), Gaps = 41/438 (9%)

Query: 20  IGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDE-AGQLFEKMSDRDGFTWNTMIAAYA 78
           +G   +   + N +     L  +++D     ++ E A ++FE M++ D  +WN MI+AY 
Sbjct: 408 LGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYL 467

Query: 79  NSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDN 138
            +G + ++  +F   P+K+  +W++++ G   +G + +A E  + M   G   S  T   
Sbjct: 468 RAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSI 527

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP--- 195
            L L S   L++ G Q HG  +K  F  + F+ + LV+MY KC  +  A  + K  P   
Sbjct: 528 ALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDF 587

Query: 196 --DGK----------NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
             +G             V+W  M++GY  NG     ++ FR M  E V  +  T  +I++
Sbjct: 588 LKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIIS 647

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           ACA     +FG  VH      G   + YV S+LIDMY+K G LD A  +   +   N V 
Sbjct: 648 ACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKSGSLDDAWTIFRQTNEPNIVF 707

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           W SMI G A  G  K+A+ LF++M  + I  ++ T+  VLN              H+ ++
Sbjct: 708 WTSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNA-----------CCHAGLL 756

Query: 364 KTGFEGYKFVNNA------------LIDMYAKQGNL-DCAFMVFNLMQDKDVISWTSLIT 410
           + G   ++ + +A            ++D+Y + G+L +    +F          W S ++
Sbjct: 757 EEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTETKNFIFENGISHLTSVWKSFLS 816

Query: 411 GCAYHGSYEEALKYFSDM 428
            C  H + E   K+ S+M
Sbjct: 817 SCRLHKNVEMG-KWVSEM 833



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/462 (23%), Positives = 206/462 (44%), Gaps = 56/462 (12%)

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           +H   + +G    +   + L+ +Y K  ++D AR+L +     N  +W  +I GF+R G 
Sbjct: 311 LHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGS 370

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
            +    LF++M A+    + +T  S+  C + +I+L   K VH+ +++ G +    + N+
Sbjct: 371 SEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNS 430

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           ++D+Y K    + A  VF LM + DV+SW  +I+     G  E++L  F  +    +   
Sbjct: 431 ILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSW 490

Query: 437 HVVVSSILSACAELTVL-------------------------------EFGQQVHAVFLK 465
           + +V  ++    E   L                               E G+Q+H + LK
Sbjct: 491 NTIVDGLMQFGYERQALEQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLK 550

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH----------------TRDVITWTAL 509
            G C    + +SLV +Y KCG +++A+ V   +                    +++W  +
Sbjct: 551 FGFCRDGFIRSSLVEMYCKCGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLM 610

Query: 510 IMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG 569
           + G   NGK ++ L+ +  M+      D  T   ++ AC++AG+ E  R +  + +   G
Sbjct: 611 VSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGR-HVHAYNHKIG 669

Query: 570 IKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAA 629
            +      + +ID+  +SG L +A  +  Q   EP+   W +++S C +HG    G++A 
Sbjct: 670 HRIDAYVGSSLIDMYSKSGSLDDAWTIFRQ-TNEPNIVFWTSMISGCALHGQ---GKQAI 725

Query: 630 NNLFELEPMNAMP----YVQLSNMYSTAGKWEDAARVRKLMK 667
               E+     +P    ++ + N    AG  E+  R  ++MK
Sbjct: 726 CLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEEGCRYFRMMK 767



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 95/173 (54%)

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
           ++H+L VK G        N L+ +Y K  N+D A  +F+ +  ++  +WT LI+G +  G
Sbjct: 310 TLHALSVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAG 369

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
           S E   K F +MR  G CP+   +SS+   C+    L+ G+ VHA  L++G  + + + N
Sbjct: 370 SSEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGN 429

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
           S++ +Y KC     A RVF+ M+  DV++W  +I    + G  +++L  + ++
Sbjct: 430 SILDLYLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRL 482


>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
 gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
          Length = 562

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 220/541 (40%), Positives = 340/541 (62%)

Query: 269 NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH 328
           N+   + LI+ + + GDLDSA ++ +     N  +WN+M+ G  +  F++  L LF++MH
Sbjct: 22  NIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMH 81

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD 388
                 D+FT  SVL   A        K VH+ ++K G+E    V ++L  MY K G+L 
Sbjct: 82  ELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLG 141

Query: 389 CAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
               V   M+ ++V++W +LI G A +G +E  L  ++ M++SG+ PD + + S++S+ A
Sbjct: 142 EGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSA 201

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
           EL  L  GQQ+HA  +K+G  S+++V +SL+ +Y+KCGC+ D+ +        D + W++
Sbjct: 202 ELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSS 261

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
           +I     +G+G+EA+  ++QM   G   + +TF+ LL+ACSH GL E    +F+ M + Y
Sbjct: 262 MIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKY 321

Query: 569 GIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
           G+KP  +HY C++DLLGRSG L EA+A++  M  E D  +WK LLSACR+H + ++  R 
Sbjct: 322 GLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRT 381

Query: 629 ANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHI 688
           A  +  L P ++  YV LSN++++A +W+D ++VR  M+ R ++KEPG SW+E  ++V  
Sbjct: 382 AEEILRLNPQDSATYVLLSNIHASAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRVFQ 441

Query: 689 FISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVA 748
           F   D+ HP+  +I   + E+M  +K  GYVPD     H+ + E KE  L  HSEKLA+A
Sbjct: 442 FSMGDKSHPMSEEIDLYLKELMEEMKLRGYVPDTATVFHDTDSEEKENSLVNHSEKLAIA 501

Query: 749 FGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDY 808
           FGL+ +P G+PIR+ KNLR+C DCH A+K IS +  R II+RD++RFHHFK G CSCGDY
Sbjct: 502 FGLMNIPPGSPIRVMKNLRICSDCHVAIKLISDINNREIIVRDTSRFHHFKHGKCSCGDY 561

Query: 809 W 809
           W
Sbjct: 562 W 562



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 192/376 (51%), Gaps = 3/376 (0%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS 109
           GEI EA   F  M  R+  + N +I  +   G L  A K+F+E   +N  TW++++ G  
Sbjct: 6   GEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLI 65

Query: 110 NYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAF 169
            +  +     LF +M   G+ P ++TL +VLR C+       G+Q H Y +K  ++ N  
Sbjct: 66  QFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLV 125

Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
           V + L  MY K   + E E + K     +N VAW T+I G +QNG+    ++ +  M++ 
Sbjct: 126 VGSSLAHMYMKSGSLGEGEKVIKAMRI-RNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMS 184

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
           G+  ++ T  S++++ A ++    G Q+H   + +G  + V V S+LI MY+KCG L+ +
Sbjct: 185 GLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDS 244

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
            + L   E  + V W+SMI  +   G  +EA+ LF++M    +  +D T+ S+L   + N
Sbjct: 245 MKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHN 304

Query: 350 IDLNNAKSVHSLIV-KTGFEGYKFVNNALIDMYAKQGNLDCA-FMVFNLMQDKDVISWTS 407
                      L+V K G +        ++D+  + G LD A  M+ ++  + DV+ W +
Sbjct: 305 GLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKT 364

Query: 408 LITGCAYHGSYEEALK 423
           L++ C  H + + A +
Sbjct: 365 LLSACRIHRNADMATR 380



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 166/349 (47%), Gaps = 3/349 (0%)

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           +N   W  M++G  Q  +    +  FR+M   G   ++FT  S+L  CA + A   G QV
Sbjct: 52  RNVATWNAMVSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQV 111

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           H  +L  G+E N+ V S+L  MY K G L    ++++   I N V+WN++I G A+ G  
Sbjct: 112 HAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHF 171

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
           +  L L+  M    ++ D  T  SV++  A    L   + +H+  +K G      V ++L
Sbjct: 172 EGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSL 231

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           I MY+K G L+ +       +  D + W+S+I    +HG  EEA+  F  M   G+  + 
Sbjct: 232 ISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGND 291

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVFD 496
           V   S+L AC+   + E G     + ++  G    L     +V +  + GC+++A  +  
Sbjct: 292 VTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIR 351

Query: 497 SMHTR-DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           SM    DV+ W  L+  C  +     A +  +++L R    D  T+V L
Sbjct: 352 SMPLEADVVIWKTLLSACRIHRNADMATRTAEEIL-RLNPQDSATYVLL 399



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 132/291 (45%), Gaps = 47/291 (16%)

Query: 380 MYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM----------R 429
           MY K G +  A   FN M  ++++S   LI G   HG  + A+K F +M           
Sbjct: 1   MYFKMGEIQEAIAFFNAMPMRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAM 60

Query: 430 ISGIC---------------------PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
           +SG+                      PD   + S+L  CA L     G+QVHA  LK G 
Sbjct: 61  VSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGY 120

Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
             +L V +SL  +Y K G + +  +V  +M  R+V+ W  LI G AQNG  +  L  Y+ 
Sbjct: 121 EFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNM 180

Query: 529 MLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH----YACMIDLL 584
           M   G +PD IT V ++ +      AE A  +         IK G +      + +I + 
Sbjct: 181 MKMSGLRPDKITLVSVISSS-----AELATLFQGQQIHAEAIKAGANSAVAVLSSLISMY 235

Query: 585 GRSGKLIEA-KALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFE 634
            + G L ++ KALLD     PD+ +W ++++A   HG    GE A  +LFE
Sbjct: 236 SKCGCLEDSMKALLD--CEHPDSVLWSSMIAAYGFHGR---GEEAV-HLFE 280


>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial [Vitis vinifera]
          Length = 875

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 255/767 (33%), Positives = 414/767 (53%), Gaps = 8/767 (1%)

Query: 45  DFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSL 104
           D S  G++   G++ +   + D     +++  Y     L +A K F+  P ++   WSS+
Sbjct: 115 DLSVGGKVH--GRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSI 172

Query: 105 IYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCF 164
           +  +   G   E  ++F QM  E   P   T+ +V   CS  G L+ G   HGY ++   
Sbjct: 173 VLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREI 232

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
           + NA +   L+ MY K   ++ AE LF+  P  +    WT MI+ Y+Q+G   +A+  F 
Sbjct: 233 ESNASLNNSLIVMYGKLGDLYSAERLFENVP-CRMTAPWTPMISCYNQSGCFQEALNVFA 291

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV-YVQSALIDMYAKC 283
            M+   +E NQ T   +L ACA +     G  VHG ++    +  + ++  AL+++YA  
Sbjct: 292 KMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADT 351

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
           G+L    ++ E  +    +SWN++I  F R G  +EAL LF +M  + + + D    +  
Sbjct: 352 GNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGL-MPDSYSLASS 410

Query: 344 NCFASNIDLNN-AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV 402
                 I  +     +H  I+KTG     FV NALIDMYAK G +  A  +F  +++K +
Sbjct: 411 LSACGTISFSQLGAQIHGYIIKTG-NFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSL 469

Query: 403 ISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAV 462
           ++W S+I G + +G   EA+  F  M ++ +  D +   S++ AC+ L  LE G+ VH  
Sbjct: 470 VTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHK 529

Query: 463 FLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEA 522
            +  G      +D +L  +Y+KCG +  A+ VFD M  R +++W+ +I G   +G+    
Sbjct: 530 LIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINAT 589

Query: 523 LQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMID 582
           +  ++QML  G KP+ ITF+ +L ACSHAG  E  + YF SM + +G++P  DH+ACM+D
Sbjct: 590 ISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSE-FGVEPKHDHFACMVD 648

Query: 583 LLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           LL R+G L  A  ++  +    ++++W ALL+ CR+H  +++ +    NL +++  +   
Sbjct: 649 LLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGY 708

Query: 643 YVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDI 702
           Y  LSN+Y+  G W+   +VR +MKS+G+RK PG S +E + +++ F   D  H    DI
Sbjct: 709 YTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDI 768

Query: 703 YSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRI 762
           Y  ++    L+    Y  + + ++    +  KE  +  HSEKLA+AFG++    G  +RI
Sbjct: 769 YRFLENFRSLVHAQVYDSEPDNSIVGTSKFNKENNVVSHSEKLAIAFGIINTRPGTTLRI 828

Query: 763 FKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            KNLRVC DCH+  K  S +  R II+RD NRFH F+ G+CSC DYW
Sbjct: 829 SKNLRVCRDCHSFAKIASKITGREIIMRDLNRFHCFRNGSCSCNDYW 875



 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 183/607 (30%), Positives = 309/607 (50%), Gaps = 11/607 (1%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGY-RP 131
           +I +YA  G    +K++F+  P  + F W  LI  Y   G   EA  L+ +M  +   + 
Sbjct: 39  LIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQI 98

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
           S +   +VL+ CS  G L  G + HG  IK  F+ +A V T L+ MY +  C+ +A   F
Sbjct: 99  SNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAF 158

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
              P  ++ VAW++++  + QNG   + ++ F  M  E VE +  T  S+  AC+ + + 
Sbjct: 159 DTMPI-RDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSL 217

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
             G  VHG ++    E+N  + ++LI MY K GDL SA RL E         W  MI  +
Sbjct: 218 RLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCY 277

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG-Y 370
            + G  +EAL++F KM    ++ +  T   VL   A    +   +SVH  +++   +   
Sbjct: 278 NQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPEL 337

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
            F+  AL+++YA  GNL     VF  +++K ++SW +LI+    +G  EEAL  F  M+ 
Sbjct: 338 DFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQT 397

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
            G+ PD   ++S LSAC  ++  + G Q+H   +K+G  +   V N+L+ +YAKCG ++ 
Sbjct: 398 QGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDF-VQNALIDMYAKCGFVHS 456

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           AN++F+ +  + ++TW ++I G +QNG   EA+  +DQM     K D +TF+ ++ ACSH
Sbjct: 457 ANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSH 516

Query: 551 AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
            G  E  +W    +  +YG++        + D+  + G+L  A  + D+M  E     W 
Sbjct: 517 LGYLEKGKWVHHKL-IMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRM-SERSIVSWS 574

Query: 611 ALLSACRVHGDLELGERAANNLF--ELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
            +++   +HG +       N +    ++P N + ++ + +  S AG  E+       M  
Sbjct: 575 VMIAGYGMHGQINATISLFNQMLGSGIKP-NDITFMHILSACSHAGAVEEGKLYFNSMSE 633

Query: 669 RGIRKEP 675
            G+  EP
Sbjct: 634 FGV--EP 638



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 147/574 (25%), Positives = 261/574 (45%), Gaps = 51/574 (8%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           + R C+    L    Q H +   T    +    T L++ YA+      ++ +F  FP   
Sbjct: 7   LFRRCATSTTLT---QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPK-P 62

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACAAVSARDFGAQV 257
           +   W  +I  Y   G+  +A+  + +M  +   + + F FPS+L AC+       G +V
Sbjct: 63  DSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKV 122

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           HG ++  GFE++  V+++L+ MY +   LD A +  +   I + V+W+S+++ F + G  
Sbjct: 123 HGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQA 182

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
            E L +F +M +  ++ D  T  SV    +    L   +SVH  +V+   E    +NN+L
Sbjct: 183 SEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSL 242

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           I MY K G+L  A  +F  +  +    WT +I+     G ++EAL  F+ M+   + P+ 
Sbjct: 243 IVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQ 302

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS-VDNSLVLVYAKCGCINDANRVFD 496
           V +  +L ACA L  ++ G+ VH   ++      L  +  +L+ +YA  G + D ++VF+
Sbjct: 303 VTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFE 362

Query: 497 SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD------------------- 537
           ++  + +++W  LI    +NG+ +EAL  + QM  +G  PD                   
Sbjct: 363 TIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQL 422

Query: 538 ------YITFVG---------LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMID 582
                 YI   G         L+   +  G   +A   FE + +   +      +  MI 
Sbjct: 423 GAQIHGYIIKTGNFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVT-----WNSMIC 477

Query: 583 LLGRSGKLIEAKALLDQM---VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMN 639
              ++G  +EA  L DQM     + D   + +++ AC   G LE G+   + L  +  + 
Sbjct: 478 GFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLI-MYGLR 536

Query: 640 AMPYVQ--LSNMYSTAGKWEDAARVRKLMKSRGI 671
              Y+   L++MYS  G+ + A  V   M  R I
Sbjct: 537 KDSYLDTALTDMYSKCGELQMAHGVFDRMSERSI 570


>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
          Length = 672

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 256/642 (39%), Positives = 375/642 (58%), Gaps = 38/642 (5%)

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +F+  P+  N + W  M  G++ +     A++ +  M   G+  N FTFP +L +CA   
Sbjct: 31  VFETIPE-PNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSK 89

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE------------ 297
               G Q+HG +L  GF+ ++YV ++LI MYA+ G L+ A+++ + S             
Sbjct: 90  TFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALIT 149

Query: 298 -------------------IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
                              I + VSWN+MI G+A  G +K+AL LFK+M   ++K D+ T
Sbjct: 150 GYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDEST 209

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
             +V++  A +  +   + VHS I   GF     + NALID+Y+K G ++ A  +   + 
Sbjct: 210 MATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLS 269

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
           +KDVISW +LI G  +   Y+EAL  F +M  SG  P+ V + SIL ACA L  ++ G+ 
Sbjct: 270 NKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 329

Query: 459 VHAVFLKSGG----CSSLSVDNSLVLVYAKCGCINDANRVFDS-MHTRDVITWTALIMGC 513
           +H    K        ++ S+  SL+ +YAKCG I+ A +V DS    R + TW A+I G 
Sbjct: 330 IHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGF 389

Query: 514 AQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPG 573
           A +G+   A   + +M   G +PD ITFVGLL ACSH+G+ +  R  F SM + Y I P 
Sbjct: 390 AMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPK 449

Query: 574 PDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLF 633
            +HY CMIDLLG SG   EA+ +++ M  EPD  +W +LL AC++HG+LELGE  A  L 
Sbjct: 450 LEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLI 509

Query: 634 ELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE-PGCSWVETNSQVHIFISE 692
           ++EP N   YV LSN+Y+TAGKW +  ++R L+  +G++K+ PGCS +E +S VH FI  
Sbjct: 510 KIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVHEFIIG 569

Query: 693 DRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLL 752
           D+ HP   +IY  ++E+ +L++EAG+VPD +  L  +EEE KE  L +HSEKLA+AFGL+
Sbjct: 570 DKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI 629

Query: 753 TLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNR 794
           +   G  + I KNLRVC +CH A K IS +Y R II RD  R
Sbjct: 630 STKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTR 671



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 151/543 (27%), Positives = 257/543 (47%), Gaps = 72/543 (13%)

Query: 83  LREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRL 142
           L  A  +F   P  N   W+ +  G++     + A +L+  M   G  P+ +T   +L+ 
Sbjct: 25  LPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKS 84

Query: 143 CSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF----------- 191
           C+     + G+Q HG+ +K  FDL+ +V T L+ MYA+   + +A+ +F           
Sbjct: 85  CAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSY 144

Query: 192 -----------------KMFPDG--KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
                            KMF +   K+ V+W  MI+GY++ G   KA+E F++M    V+
Sbjct: 145 TALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVK 204

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
            ++ T  ++++ACA   + + G QVH  I   GF +N+ + +ALID+Y+KCG++++A  L
Sbjct: 205 PDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACEL 264

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
           LE     + +SWN++I G+     +KEAL LF++M       +D T  S+L   A    +
Sbjct: 265 LEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 324

Query: 353 NNAKSVHSLIVKTGFEGYKFVN-----NALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWT 406
           +  + +H  I K   +G    N      +LIDMYAK G++D A  V +    ++ + +W 
Sbjct: 325 DIGRWIHVYIDKK-LKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWN 383

Query: 407 SLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
           ++I G A HG    A   FS MR +GI PD +    +LSAC+   +L+ G+ +       
Sbjct: 384 AMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIF------ 437

Query: 467 GGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFY 526
               S+  D ++       GC+ D                   ++G   +G  KEA +  
Sbjct: 438 ---RSMRQDYNITPKLEHYGCMID-------------------LLG--HSGLFKEAEEMI 473

Query: 527 DQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGR 586
           + M     +PD + +  LL AC   G  E    + + + K+    PG   Y  + ++   
Sbjct: 474 NTM---PMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGS--YVLLSNIYAT 528

Query: 587 SGK 589
           +GK
Sbjct: 529 AGK 531



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 227/451 (50%), Gaps = 29/451 (6%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           ++ +G +++A ++F++ S RD  ++  +I  YA+ G +  A+K+F+E P K+  +W+++I
Sbjct: 120 YAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMI 179

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            GY+  G   +A ELF +M     +P + T+  V+  C+  G ++ G Q H +     F 
Sbjct: 180 SGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFG 239

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            N  +V  L+D+Y+KC  +  A  L +   + K+ ++W T+I GY+      +A+  F++
Sbjct: 240 SNLKIVNALIDLYSKCGEVETACELLEGLSN-KDVISWNTLIGGYTHMNLYKEALLLFQE 298

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVH--------GCILSSGFEANVYVQSALI 277
           M   G   N  T  SIL ACA + A D G  +H        G ++++       ++++LI
Sbjct: 299 MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASS----LRTSLI 354

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           DMYAKCGD+D+A ++ + S  +  +S WN+MI GFA  G    A  +F +M    I+ DD
Sbjct: 355 DMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDD 414

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLI-----VKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
            T+  +L+  + +  L+  +++   +     +    E Y      +ID+    G    A 
Sbjct: 415 ITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHY----GCMIDLLGHSGLFKEAE 470

Query: 392 MVFNLM-QDKDVISWTSLITGCAYHGSYEEALKYFSDM-RISGICPDHVVVSSILSACA- 448
            + N M  + D + W SL+  C  HG+ E    +   + +I    P   V+ S + A A 
Sbjct: 471 EMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAG 530

Query: 449 ---ELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
              E+  +        +  K  GCSS+ +D+
Sbjct: 531 KWNEVXKIRTLLNDKGMKKKVPGCSSIEIDS 561



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 111/258 (43%), Gaps = 33/258 (12%)

Query: 387 LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSA 446
           L  A  VF  + + + + W  +  G A       ALK +  M   G+ P+      +L +
Sbjct: 25  LPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKS 84

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITW 506
           CA+    + GQQ+H   LK G    L V  SL+ +YA+ G + DA +VFD    RDV+++
Sbjct: 85  CAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSY 144

Query: 507 TALIM-------------------------------GCAQNGKGKEALQFYDQMLARGTK 535
           TALI                                G A+ G  K+AL+ + +M+    K
Sbjct: 145 TALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVK 204

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           PD  T   ++ AC+ +G  E  R     ++  +G          +IDL  + G++  A  
Sbjct: 205 PDESTMATVVSACAQSGSIELGRQVHSWIND-HGFGSNLKIVNALIDLYSKCGEVETACE 263

Query: 596 LLDQMVGEPDATVWKALL 613
           LL+ +  + D   W  L+
Sbjct: 264 LLEGLSNK-DVISWNTLI 280


>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 881

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 235/684 (34%), Positives = 388/684 (56%), Gaps = 4/684 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D  T   ++  Y+   +L  A  +F E P +N   WS++I GY       E  +L+  
Sbjct: 202 DSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKV 261

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M  EG   SQ T  +  R C+     + G Q H YA+KT F  +  V T  +DMYAKC  
Sbjct: 262 MLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDR 321

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A  +F  FP+     +   +I GY++     +A+E FR ++   ++ ++ +    LT
Sbjct: 322 MVDARKVFNTFPNPTRQ-SHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALT 380

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC+A+     G Q+HG  +  G + N+ V + ++DMYAKCG L  A  + +  EI + VS
Sbjct: 381 ACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVS 440

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN++I    +    +E L+LF  M    ++ DD+T+ SV+   A    LN    VH  ++
Sbjct: 441 WNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVI 500

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K+G     FV +A+IDMY K G L  A  +   ++++  +SW S+I+G +     E AL 
Sbjct: 501 KSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALS 560

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
           YFS M   G+ PD+   +++L  CA L  +E G+Q+H   LK    S + + +++V +Y+
Sbjct: 561 YFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYS 620

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG + D+  +F+    RD +TW+A+I   A +G G++A++ +++M  +  KP++  F+ 
Sbjct: 621 KCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFIS 680

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           +L AC+H G  +    YF  M   YG+ P  +HY+CM+DLLGRSG++ EA  L++ M  E
Sbjct: 681 VLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFE 740

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
            D  +W+ LL  CR+ G++E+ E+AAN+L +L+P ++  YV LSN+Y+ AG W + A++R
Sbjct: 741 ADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIR 800

Query: 664 KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMN 723
             MK+  ++KEPGCSW++   +VH F+  D+ HP   +IY +   ++  +K  GYVP+++
Sbjct: 801 SFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRSEEIYQQTHLLVDEMKWDGYVPEID 860

Query: 724 FALHNVEEEGKEIGLAYHSEKLAV 747
             L + E + ++   +Y   K+ V
Sbjct: 861 GFLLDEEVDEQD---SYEGHKITV 881



 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 183/630 (29%), Positives = 312/630 (49%), Gaps = 13/630 (2%)

Query: 18  KIIGPARYTH---NVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMI 74
           K I P +  H    V   V      N  L  +     ++ A  +F+KM  RD  +WNTMI
Sbjct: 52  KAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMI 111

Query: 75  AAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQY 134
             YA  G +  A+ LF+  P ++  +W+S++  Y   G   ++ E+F +M+L   +    
Sbjct: 112 FGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYA 171

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
           T   VL+ C+       G Q H  AI+  FD +    T LVDMY+ CK +  A  +F   
Sbjct: 172 TFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEM 231

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
           P+ +N V W+ +I GY +N    + ++ ++ M  EG+  +Q TF S   +CA +SA + G
Sbjct: 232 PE-RNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELG 290

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
            Q+H   L + F  +  V +A +DMYAKC  +  AR++          S N++IVG+ARQ
Sbjct: 291 TQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQ 350

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
               EAL +F+ +    +  D+ +    L   ++         +H L VK G +    V 
Sbjct: 351 DQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVA 410

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           N ++DMYAK G L  A ++F+ M+ KD +SW ++I     +   EE L  F  M  S + 
Sbjct: 411 NTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTME 470

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           PD     S++ ACA    L +G +VH   +KSG      V ++++ +Y KCG + +A ++
Sbjct: 471 PDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKI 530

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
            + +  R  ++W ++I G +   +G+ AL ++ +ML  G  PD  T+  +L  C++    
Sbjct: 531 HERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATV 590

Query: 555 ENARWYFESMDKVYGIKPGPDHY--ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
           E  +   +   ++  ++   D Y  + ++D+  + G + +++ + ++   + D   W A+
Sbjct: 591 ELGK---QIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEK-APKRDYVTWSAM 646

Query: 613 LSACRVHGDLELGERAANNLFELEPMNAMP 642
           + A   HG   LGE A     E++  N  P
Sbjct: 647 ICAYAYHG---LGEDAIKLFEEMQLQNVKP 673



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 147/517 (28%), Positives = 241/517 (46%), Gaps = 40/517 (7%)

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC----------- 181
           + T  ++ + CS    +  G+Q H     T F    FV   L+  Y KC           
Sbjct: 38  KLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFD 97

Query: 182 -----------KCIFE---------AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIE 221
                        IF          A++LF   P+ ++ V+W +M++ Y QNG+  K+IE
Sbjct: 98  KMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPE-RDVVSWNSMLSCYLQNGFHRKSIE 156

Query: 222 CFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYA 281
            F  MR+  ++ +  TF  +L AC  +     G QVH   +  GF+++V   +AL+DMY+
Sbjct: 157 IFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYS 216

Query: 282 KCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPS 341
            C  LD A  +       N V W+++I G+ R     E L L+K M    + +   T+ S
Sbjct: 217 TCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFAS 276

Query: 342 VLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
                A          +H+  +KT F     V  A +DMYAK   +  A  VFN   +  
Sbjct: 277 AFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPT 336

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
             S  +LI G A      EAL+ F  ++ S +  D + +S  L+AC+ +     G Q+H 
Sbjct: 337 RQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHG 396

Query: 462 VFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKE 521
           + +K G   ++ V N+++ +YAKCG + +A  +FD M  +D ++W A+I    QN   +E
Sbjct: 397 LAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEE 456

Query: 522 ALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY--AC 579
            L  +  ML    +PD  TF  ++ AC  AG  +   +  E   +V     G D +  + 
Sbjct: 457 TLALFVSMLRSTMEPDDYTFGSVVKAC--AG-KKALNYGMEVHGRVIKSGMGLDWFVGSA 513

Query: 580 MIDLLGRSGKLIEAKALLDQMVGEPDATV-WKALLSA 615
           +ID+  + G L+EA+ + +++  E   TV W +++S 
Sbjct: 514 IIDMYCKCGMLVEAEKIHERL--EERTTVSWNSIISG 548



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 130/255 (50%), Gaps = 3/255 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G++ +     D F  + +I  Y   G L EA+K+      +   +W+S+I G+S+     
Sbjct: 497 GRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGE 556

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
            A   F +M   G  P  +T   VL +C+    ++ G+Q HG  +K     + ++ + +V
Sbjct: 557 NALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIV 616

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMY+KC  + ++  +F+  P  +++V W+ MI  Y+ +G G  AI+ F +M+++ V+ N 
Sbjct: 617 DMYSKCGNMQDSRIMFEKAPK-RDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNH 675

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLE 294
             F S+L ACA +   D G      + S  G +  +   S ++D+  + G ++ A  L+E
Sbjct: 676 TIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIE 735

Query: 295 YSEID-NEVSWNSMI 308
               + ++V W +++
Sbjct: 736 SMPFEADDVIWRTLL 750


>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
 gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
 gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
          Length = 630

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 232/584 (39%), Positives = 342/584 (58%)

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           +RVE    + FT   +L  CA   +   G   HG  +  G   +    + LI++Y KCG 
Sbjct: 47  VRVERDLIDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQ 106

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
            D ARR+ +   + + +SWN+MI G+       EAL LF +MH    ++ +FT  S L  
Sbjct: 107 NDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCA 166

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
            A+   +   K +H++ +K   +   FV  A +D+YAK   +  A  VF  M +K  ++W
Sbjct: 167 CAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTW 226

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
           +SL  G   +G +EE L  F   +  G+      VSSILS CA L ++  G QVHAV +K
Sbjct: 227 SSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVK 286

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
            G   +L V  SLV VYAKCG I  +  VF  M  ++V+ W A+I   +++    EA+  
Sbjct: 287 HGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMIL 346

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
           +++M   G  P+ +T++ +L ACSH GL E  R YF  +      +P   HY+CM+D+LG
Sbjct: 347 FEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLG 406

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ 645
           RSGK  EA  LLD+M  EP A++W +LL + R+H ++ L   AA  LF LEP N   +V 
Sbjct: 407 RSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGNHVL 466

Query: 646 LSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSK 705
           LSN+Y+ +G WE+    RK ++  G +KE G SW+E   ++H+F++ +R HP  TD+Y+K
Sbjct: 467 LSNVYAASGNWENVVVARKYLRDSGAKKEMGRSWIEAKGKIHVFVAGEREHPGITDVYNK 526

Query: 706 IDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKN 765
           ++EI   +++  +  +    LH+V  + KE  L +HSEKLA AFGL++LP   PI I+KN
Sbjct: 527 LEEIYHEMRKISHRANTQCDLHDVHADQKEELLKHHSEKLAFAFGLISLPPNIPITIYKN 586

Query: 766 LRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           LR+CGDCH+ MK +S +  R +I+RD NRFHHFK G+CSCGD+W
Sbjct: 587 LRICGDCHSFMKIVSCITERQVIVRDINRFHHFKDGSCSCGDFW 630



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 191/352 (54%), Gaps = 3/352 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D  T N +I  Y   G+   A+++F+    ++  +W+++I GY++   D+EA +LF +M 
Sbjct: 90  DTVTCNILINLYTKCGQNDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMH 149

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            EG + +++TL + L  C+ K  +   +Q H  AIK   D ++FV T  +D+YAKC  I 
Sbjct: 150 REGTQMTEFTLSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIK 209

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A ++F+  P+ K  V W+++  G+ QNG   + +  F+  + EG++  +FT  SIL+ C
Sbjct: 210 DACWVFENMPE-KTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTC 268

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A+++    G QVH  I+  GF  N++V ++L+D+YAKCG ++ +  +    E  N V WN
Sbjct: 269 ASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWN 328

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVK 364
           +MI  F+R     EA+ LF+KM    I  ++ TY S+L+ C  + +        + L+  
Sbjct: 329 AMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSD 388

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYH 415
              E      + ++D+  + G  D A+ + + M  +   S W SL+     H
Sbjct: 389 RTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIH 440



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 189/366 (51%), Gaps = 2/366 (0%)

Query: 134 YTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKM 193
           +TL  +L+LC+ +  L  G+  HG AI      +      L+++Y KC     A  +F  
Sbjct: 57  FTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDA 116

Query: 194 FPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDF 253
               ++ ++W TMI GY+ N    +A++ F  M  EG +  +FT  S L ACAA  A   
Sbjct: 117 M-SVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIE 175

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
             Q+H   +    +++ +V +A +D+YAKC  +  A  + E       V+W+S+  GF +
Sbjct: 176 CKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQ 235

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
            G H+E L LF+      +++ +FT  S+L+  AS   +     VH++IVK GF    FV
Sbjct: 236 NGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFV 295

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
             +L+D+YAK G ++ ++ VF  M++K+V+ W ++I   + H    EA+  F  M+  GI
Sbjct: 296 ATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGI 355

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LVLVYAKCGCINDAN 492
            P+ V   SILSAC+   ++E G+    + L         +  S +V V  + G  ++A 
Sbjct: 356 FPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAW 415

Query: 493 RVFDSM 498
           ++ D M
Sbjct: 416 KLLDKM 421



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 124/249 (49%), Gaps = 7/249 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D   F     +  YA    +++A  +F   P K   TWSSL  G+   GL  E   LF  
Sbjct: 189 DSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQS 248

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
            Q EG + +++T+ ++L  C+   L+  G Q H   +K  F  N FV T LVD+YAKC  
Sbjct: 249 TQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQ 308

Query: 184 IFEAEYLFKMFPD--GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
           I   E  +++F D   KN V W  MI  +S++ + ++A+  F  M+  G+  N+ T+ SI
Sbjct: 309 I---EKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSI 365

Query: 242 LTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           L+AC+     + G      +LS    E NV   S ++D+  + G  D A +LL+    + 
Sbjct: 366 LSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEP 425

Query: 301 EVS-WNSMI 308
             S W S++
Sbjct: 426 TASMWGSLL 434



 Score = 43.9 bits (102), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 35/168 (20%), Positives = 72/168 (42%), Gaps = 33/168 (19%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           +LVD ++  G+I+++ ++F  M +++   WN MIA+++                 ++  +
Sbjct: 298 SLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFS-----------------RHAHS 340

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
           W ++I              LF +MQ  G  P++ T  ++L  CS  GL++ G  +    +
Sbjct: 341 WEAMI--------------LFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLL 386

Query: 161 K-TCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
                + N    + +VD+  +     EA  L    P       W +++
Sbjct: 387 SDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLL 434


>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 244/684 (35%), Positives = 386/684 (56%), Gaps = 6/684 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           +G     ++  Y   G   +AK +F +        W+ +I G++  G    A   +++M 
Sbjct: 80  NGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKML 139

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G  P +YT   V++ C     +  G   H       F+L+ FV + L+  Y++  CI 
Sbjct: 140 GCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIH 199

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A YLF   P  K+ V W  M+ GY +NG    A   F +MR      N  TF  +L+ C
Sbjct: 200 DARYLFDRMPS-KDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVC 258

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQS--ALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           A+    +FG+Q+HG ++SSG E +  V +  ALID+Y KC D++ AR++ +     + V 
Sbjct: 259 ASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVV 318

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
             +MI G+   G +  AL +F+ +    ++ +  T  SVL   A    L   K +H  I+
Sbjct: 319 CTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHIL 378

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K G  G  +V +A++DMYAK G LD A   F  + DKD + W S+IT C+ +G  EEA+ 
Sbjct: 379 KNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAID 438

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            F  M ++G   D V +S+ LSACA L  L +G+++HA  ++    S L  +++L+ +Y+
Sbjct: 439 LFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYS 498

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG ++ A RVFD+M  ++ ++W ++I     +G+ K++L  +  ML  G +PD++TF+ 
Sbjct: 499 KCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLA 558

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           ++ AC HAG  +    YF  M +  GI    +HYACM+DL GR+G+L EA  +++ M   
Sbjct: 559 IISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFS 618

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
           PDA VW  LL ACR+HG++EL E A+ NLF+L+P N+  YV LSN+++ AG+WE   ++R
Sbjct: 619 PDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIR 678

Query: 664 KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMN 723
            LMK RG++K PGCSW++ N+  H+F++ DR HP  + IY  +  + L +++ GYVP + 
Sbjct: 679 SLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIYLLLKNLFLELRKEGYVPQLY 738

Query: 724 FALHNVEEEGKEIGLA--YHSEKL 745
             +H  +  G   G    YHS K+
Sbjct: 739 LPMHP-QTMGLHNGRISYYHSSKI 761



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 148/516 (28%), Positives = 252/516 (48%), Gaps = 35/516 (6%)

Query: 130 RPSQYTLDN----------VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYA 179
           +P Q+++ N          +L+ C+    L +G Q H   +      N  + T L+ MY 
Sbjct: 33  KPLQFSIHNDDSLAPQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYV 92

Query: 180 KCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFP 239
            C    +A+ +F       +   W  MI G++  G    A+  +  M   G   +++TFP
Sbjct: 93  LCGAFLDAKNIFYQLRLWCSE-PWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFP 151

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
            ++ AC  +++   G  VH  I   GFE +V+V S+LI  Y++ G +  AR L +     
Sbjct: 152 YVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSK 211

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           + V WN M+ G+ + G    A  +F +M   +   +  T+  VL+  AS I +N    +H
Sbjct: 212 DGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLH 271

Query: 360 SLIVKTGFEGYKFVNN--ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
            L+V +G E    V N  ALID+Y K  +++ A  +F+     D++  T++I+G   +G 
Sbjct: 272 GLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGM 331

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
              AL+ F  +    +  + V ++S+L ACA L  L  G+++H   LK+G   S  V ++
Sbjct: 332 NNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSA 391

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
           ++ +YAKCG ++ A++ F  +  +D + W ++I  C+QNGK +EA+  + QM   GTK D
Sbjct: 392 IMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYD 451

Query: 538 YITFVGLLFACS-----HAGLAENA---RWYFESMDKVYGIKPGPDHYA--CMIDLLGRS 587
            ++    L AC+     H G   +A   R  F S           D +A   +ID+  + 
Sbjct: 452 CVSISAALSACANLPALHYGKEIHAFMMRGAFRS-----------DLFAESALIDMYSKC 500

Query: 588 GKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
           G L  A  + D M  E +   W ++++A   HG L+
Sbjct: 501 GNLDLACRVFDTM-EEKNEVSWNSIIAAYGNHGRLK 535



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 121/272 (44%), Gaps = 34/272 (12%)

Query: 20  IGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYA 78
           +G   + H + N    +  +  A++D ++  G +D A Q F  +SD+D   WN+MI + +
Sbjct: 369 LGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCS 428

Query: 79  NSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDN 138
            +G+                                 EA +LF QM + G +    ++  
Sbjct: 429 QNGKPE-------------------------------EAIDLFRQMGMAGTKYDCVSISA 457

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
            L  C+    L  G++ H + ++  F  + F  + L+DMY+KC  +  A  +F    + K
Sbjct: 458 ALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEE-K 516

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           N V+W ++I  Y  +G    ++  F  M  +G++ +  TF +I++AC      D G    
Sbjct: 517 NEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYF 576

Query: 259 GCILSS-GFEANVYVQSALIDMYAKCGDLDSA 289
            C+    G  A +   + ++D++ + G L+ A
Sbjct: 577 RCMTEELGIMARMEHYACMVDLFGRAGRLNEA 608


>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
 gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
          Length = 708

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 233/604 (38%), Positives = 348/604 (57%), Gaps = 19/604 (3%)

Query: 217 FKAIECFRDMR-------VEGVESNQFTFPSILTACAAV----SARDFGAQVHGCILSSG 265
           F+A    R +R         G  +++FT   ++ A A +    +AR+   ++        
Sbjct: 113 FRACRALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP------- 165

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
              NV   + L   Y K GDL  AR+L +     N  +WN+M+ G    GF +E+L  F 
Sbjct: 166 -RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFL 224

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
            M    +  D+F   SV  C A   D+   + VH+ +V++G +    V ++L  MY + G
Sbjct: 225 DMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCG 284

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
            L     V  ++    ++S  ++I G   +G  E AL+YF  MR  G+  D V   S +S
Sbjct: 285 CLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAIS 344

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
           +C++L  L  GQQ+H   +K+G    + V   LV +Y++CGC+ D+ RVF      D   
Sbjct: 345 SCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFL 404

Query: 506 WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMD 565
            +A+I     +G G++A++ + QM+  G +P  +TF+ LL+ACSH+GL E     FE M 
Sbjct: 405 LSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMT 464

Query: 566 KVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELG 625
           K YG++P   HY C++DLLGRSG L EA+AL+  M   PD  +WK LLSAC+   + ++ 
Sbjct: 465 KTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMA 524

Query: 626 ERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQ 685
           ER A  + EL+P ++  YV LSN+ +T+ +W D + VRK M+   +RKEPG SWVE    
Sbjct: 525 ERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGH 584

Query: 686 VHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKL 745
           +H F + D  HP + +I   ++E+M  I++ GY PDM+  LH++E+E KE+ L++HSEKL
Sbjct: 585 IHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKL 644

Query: 746 AVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSC 805
           A+AF  L+LP+G PIR+ KNLRVC DCH A+K +S V  R I++RD +RFHHFK G CSC
Sbjct: 645 AIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSC 704

Query: 806 GDYW 809
            DYW
Sbjct: 705 RDYW 708



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 214/413 (51%), Gaps = 10/413 (2%)

Query: 15  CRSKIIGPARYTHNVGNSVKPASD---LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWN 71
           CR+  + P R  H    +   A+D    N  ++ +++ G++  A +LFE++  R+  +WN
Sbjct: 116 CRA--LRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWN 173

Query: 72  TMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRP 131
            +   Y  +G L  A+KLF+E P +N  TW++++ G +N G D E+   F  M+ EG  P
Sbjct: 174 ILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHP 233

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
            ++ L +V R C+    +  G Q H Y +++  D +  V + L  MY +C C+ E E + 
Sbjct: 234 DEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVL 293

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
           +M P   + V+  T+I G +QNG    A+E F  MR  GV ++  TF S +++C+ ++A 
Sbjct: 294 RMLPS-LSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAAL 352

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDL-DSARRLLEYSEIDNEVSWNSMIVG 310
             G Q+HG ++ +G +  V V + L+ MY++CG L DS R    Y   D  +  ++MI  
Sbjct: 353 AQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFL-LSAMISA 411

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT-GFEG 369
           +   G  ++A+ LFK+M     +  D T+ ++L   + +           L+ KT G + 
Sbjct: 412 YGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQP 471

Query: 370 YKFVNNALIDMYAKQGNLDCA-FMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
                  ++D+  + G LD A  ++ ++    D + W +L++ C    +++ A
Sbjct: 472 SVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMA 524



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 191/441 (43%), Gaps = 18/441 (4%)

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ----LEGYRPSQYT 135
           +GRLR+A +     PF+    WS     +S+      A     Q+       G    ++T
Sbjct: 86  TGRLRDALR----RPFRGVL-WSDAARLFSHLFRACRALRPLRQLHAFAATSGAATDRFT 140

Query: 136 LDNV-LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
            +++ L    L  L    E F     +     N      L   Y K   +  A  LF   
Sbjct: 141 ANHLMLAYADLGDLTAARELFERIPRRNVMSWNI-----LFGGYIKNGDLGGARKLFDEM 195

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
           P+ +N   W  M+ G +  G+  +++  F DMR EG+  ++F   S+   CA +     G
Sbjct: 196 PE-RNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTG 254

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
            QVH  ++ SG + ++ V S+L  MY +CG L     +L      + VS N++I G  + 
Sbjct: 255 RQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQN 314

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
           G  + AL  F  M +  +  D  T+ S ++  +    L   + +H  ++K G +    V 
Sbjct: 315 GDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVM 374

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
             L+ MY++ G L  +  VF      D    +++I+   +HG  ++A++ F  M   G  
Sbjct: 375 TCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAE 434

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAKCGCINDANR 493
           P  V   ++L AC+   + E G     +  K+ G   S+     +V +  + GC+++A  
Sbjct: 435 PSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEA 494

Query: 494 VFDSMH-TRDVITWTALIMGC 513
           +  SM  T D + W  L+  C
Sbjct: 495 LILSMPLTPDGVIWKTLLSAC 515


>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 235/676 (34%), Positives = 386/676 (57%), Gaps = 2/676 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           + D  T + ++  Y+   +L  A ++F E P +N   WS++I GY      IE  +LF  
Sbjct: 170 ENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKD 229

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M   G   SQ T  +V R C+     + G Q HG+A+K+ F  ++ + T  +DMYAKC  
Sbjct: 230 MLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDR 289

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A  +F   P+     ++  +I GY++   G KA+E F+ ++   +  ++ +    LT
Sbjct: 290 MSDAWKVFNTLPNPPRQ-SYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALT 348

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC+ +     G Q+HG  +  G   N+ V + ++DMY KCG L  A  + +  E  + VS
Sbjct: 349 ACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVS 408

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN++I    +     + LSLF  M    ++ DDFTY SV+   A    LN    +H  IV
Sbjct: 409 WNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIV 468

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K+G     FV +AL+DMY K G L  A  + + +++K  +SW S+I+G +     E A +
Sbjct: 469 KSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQR 528

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
           YFS M   G+ PD+   +++L  CA +  +E G+Q+HA  LK    S + + ++LV +Y+
Sbjct: 529 YFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYS 588

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG + D+  +F+    RD +TW+A+I   A +G G++A++ +++M     KP++  F+ 
Sbjct: 589 KCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFIS 648

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           +L AC+H G  +    YF+ M   YG+ P  +HY+CM+DLLGRS ++ EA  L++ M  E
Sbjct: 649 VLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFE 708

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
            D  +W+ LLS C++ G++E+ E+A N+L +L+P ++  YV L+N+Y+  G W + A++R
Sbjct: 709 ADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYANVGMWGEVAKIR 768

Query: 664 KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMN 723
            +MK+  ++KEPGCSW+E   +VH F+  D+ HP   +IY +   ++  +K AGYVPD++
Sbjct: 769 SIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWAGYVPDID 828

Query: 724 FAL-HNVEEEGKEIGL 738
             L   VEE+    GL
Sbjct: 829 SMLDEEVEEQDPYEGL 844



 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 178/630 (28%), Positives = 314/630 (49%), Gaps = 13/630 (2%)

Query: 18  KIIGPARYTHN--VGNSVKPASDLNRALVDF-SNSGEIDEAGQLFEKMSDRDGFTWNTMI 74
           K + P +  H   +  S  P   +   LV F   S  ++ A ++F++M  RD  +WNTMI
Sbjct: 20  KALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRMPHRDVISWNTMI 79

Query: 75  AAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQY 134
             YA  G +  A+ LF+  P ++  +W+SL+  Y + G++ ++ E+F +M+         
Sbjct: 80  FGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYA 139

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
           T   VL+ CS       G Q H  AI+  F+ +    + LVDMY+KCK +  A  +F+  
Sbjct: 140 TFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREM 199

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
           P+ +N V W+ +I GY QN    + ++ F+DM   G+  +Q T+ S+  +CA +SA   G
Sbjct: 200 PE-RNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLG 258

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
            Q+HG  L S F  +  + +A +DMYAKC  +  A ++          S+N++IVG+ARQ
Sbjct: 259 TQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQ 318

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
               +AL +F+ +    +  D+ +    L   +          +H L VK G      V 
Sbjct: 319 DQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVA 378

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           N ++DMY K G L  A  +F+ M+ +D +SW ++I     +    + L  F  M  S + 
Sbjct: 379 NTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTME 438

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           PD     S++ ACA    L +G ++H   +KSG      V ++LV +Y KCG + +A ++
Sbjct: 439 PDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKI 498

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
            D +  +  ++W ++I G +   + + A +++ QML  G  PD  T+  +L  C++    
Sbjct: 499 HDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATI 558

Query: 555 ENARWYFESMDKVYGIKPGPDHY--ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
           E  +   +   ++  +    D Y  + ++D+  + G + +++ + ++   + D   W A+
Sbjct: 559 ELGK---QIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEK-TPKRDYVTWSAM 614

Query: 613 LSACRVHGDLELGERAANNLFELEPMNAMP 642
           + A   HG    GE+A     E++ +N  P
Sbjct: 615 ICAYAYHGH---GEQAIKLFEEMQLLNVKP 641



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 147/536 (27%), Positives = 247/536 (46%), Gaps = 38/536 (7%)

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
           ++T  ++L+ CS    L  G+Q H   I T F    +V   LV  Y K   +  A  +F 
Sbjct: 6   KFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFD 65

Query: 193 MFPDGKNHVAWTTMITGYSQ-------------------------------NGYGFKAIE 221
             P  ++ ++W TMI GY++                               NG   K+IE
Sbjct: 66  RMPH-RDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIE 124

Query: 222 CFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYA 281
            F  MR   +  +  TF  +L AC+ +     G QVH   +  GFE +V   SAL+DMY+
Sbjct: 125 IFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYS 184

Query: 282 KCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPS 341
           KC  LD A R+       N V W+++I G+ +     E L LFK M    + +   TY S
Sbjct: 185 KCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYAS 244

Query: 342 VLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
           V    A          +H   +K+ F     +  A +DMYAK   +  A+ VFN + +  
Sbjct: 245 VFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPP 304

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
             S+ ++I G A      +AL+ F  ++ + +  D + +S  L+AC+ +     G Q+H 
Sbjct: 305 RQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHG 364

Query: 462 VFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKE 521
           + +K G   ++ V N+++ +Y KCG + +A  +FD M  RD ++W A+I    QN +  +
Sbjct: 365 LAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVK 424

Query: 522 ALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY--AC 579
            L  +  ML    +PD  T+  ++ AC  AG  +   +  E   ++     G D +  + 
Sbjct: 425 TLSLFVSMLRSTMEPDDFTYGSVVKAC--AG-QQALNYGMEIHGRIVKSGMGLDWFVGSA 481

Query: 580 MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
           ++D+ G+ G L+EA+ + D++  E     W +++S        E  +R  + + E+
Sbjct: 482 LVDMYGKCGMLMEAEKIHDRL-EEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEM 536



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 115/424 (27%), Positives = 205/424 (48%), Gaps = 53/424 (12%)

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
           + +FTF  IL  C+ + A + G Q H  ++ + F   +YV + L+  Y K  +++ A ++
Sbjct: 4   TKKFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKV 63

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN--- 349
            +     + +SWN+MI G+A  G    A SLF  M  RD+     ++ S+L+C+  N   
Sbjct: 64  FDRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDV----VSWNSLLSCYLHNGVN 119

Query: 350 -------IDLNNAK-------------------------SVHSLIVKTGFEGYKFVNNAL 377
                  + + + K                          VH L ++ GFE      +AL
Sbjct: 120 RKSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSAL 179

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           +DMY+K   LD AF +F  M +++++ W+++I G   +  + E LK F DM   G+    
Sbjct: 180 VDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQ 239

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
              +S+  +CA L+  + G Q+H   LKS       +  + + +YAKC  ++DA +VF++
Sbjct: 240 STYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNT 299

Query: 498 MHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENA 557
           +      ++ A+I+G A+  +G +AL+ +  +       D I+  G L ACS        
Sbjct: 300 LPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACS------VI 353

Query: 558 RWYFESMDKVYG--IKPGPDHYAC----MIDLLGRSGKLIEAKALLDQMVGEPDATVWKA 611
           + + E + +++G  +K G     C    ++D+ G+ G L+EA  + D M    DA  W A
Sbjct: 354 KGHLEGI-QLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDM-ERRDAVSWNA 411

Query: 612 LLSA 615
           +++A
Sbjct: 412 IIAA 415



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 147/295 (49%), Gaps = 4/295 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G++ +     D F  + ++  Y   G L EA+K+ +    K   +W+S+I G+S+     
Sbjct: 465 GRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSE 524

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
            A   F QM   G  P  +T   VL +C+    ++ G+Q H   +K     + ++ + LV
Sbjct: 525 NAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLV 584

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMY+KC  + ++  +F+  P  +++V W+ MI  Y+ +G+G +AI+ F +M++  V+ N 
Sbjct: 585 DMYSKCGNMQDSRLMFEKTPK-RDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNH 643

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLE 294
             F S+L ACA +   D G      + S  G + ++   S ++D+  +   ++ A +L+E
Sbjct: 644 TIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIE 703

Query: 295 YSEID-NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
               + ++V W +++     QG  + A   F  +   D + D   Y  + N +A+
Sbjct: 704 SMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQ-DSSAYVLLANVYAN 757


>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Cucumis sativus]
          Length = 679

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 236/592 (39%), Positives = 339/592 (57%), Gaps = 35/592 (5%)

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G QVH  +L  G +    V S ++  YA  GD+DS+  +       + + +NSMI  +A
Sbjct: 88  LGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYA 147

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
           R GF +  ++ +  MH+     D FT+P VL      + +   K VH LI++ G +   +
Sbjct: 148 RYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLY 207

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM---- 428
           V  +LI +Y K G ++ A  VF+ M  +DV SW +L+ G    G  + AL  F  M    
Sbjct: 208 VATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRN 267

Query: 429 -----------------------------RISGICPDHVVVSSILSACAELTVLEFGQQV 459
                                          SG+ P+ V + S+L ACA+L+ LE G+Q+
Sbjct: 268 IVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQI 327

Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM--HTRDVITWTALIMGCAQNG 517
           H +  + G  S+ SV  +L  +YAKCG + DA   FD +  + +++I W  +I   A  G
Sbjct: 328 HELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYG 387

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY 577
            G +A+  + +M+  G +PD ITF GLL  CSH+GL +    YF  M   Y I P  +HY
Sbjct: 388 HGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHY 447

Query: 578 ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEP 637
           AC+ DLLGR+G+L EA  L+ +M      ++W +LL+ACR H +LE+ E AA  LF LEP
Sbjct: 448 ACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEP 507

Query: 638 MNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHP 697
            N   YV LSNMY+ AG+W++  ++R ++KS+G +K PGCSW+E N + H+F+  D  HP
Sbjct: 508 ENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHP 567

Query: 698 LRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQG 757
              +IY  ++ +   +K AGY PD ++ LH++ EE KE  L  HSEKLAVAFG+L  P  
Sbjct: 568 QGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGILNTPAE 627

Query: 758 APIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             +R+ KNLR+CGDCHTAM +IS +Y R +I+RD NRFHHFK G CSCGDYW
Sbjct: 628 TVLRVTKNLRICGDCHTAMVFISEIYGREVIVRDINRFHHFKGGCCSCGDYW 679



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 148/272 (54%), Gaps = 7/272 (2%)

Query: 43  LVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWS 102
           ++ +   GEI++AG++F+ M+ RD  +WN ++A Y  SG +  A  +F   P++N  +W+
Sbjct: 213 IILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWT 272

Query: 103 SLIYGYSNYGLDIEAFELFWQMQLE--GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
           ++I GYS  GL  +A  LF +M  E  G RP+  T+ +VL  C+    L+RG Q H  A 
Sbjct: 273 TMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELAC 332

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF-KMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           +   + NA V+  L  MYAKC  + +A   F K+  + KN +AW TMIT Y+  G+G +A
Sbjct: 333 RMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQA 392

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ--SALI 277
           +  FR+M   G++ +  TF  +L+ C+     D G +     +S+ +  N  V+  + + 
Sbjct: 393 VSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNH-MSTTYSINPRVEHYACVA 451

Query: 278 DMYAKCGDLDSARRLL-EYSEIDNEVSWNSMI 308
           D+  + G L  A +L+ E         W S++
Sbjct: 452 DLLGRAGRLAEASKLVGEMPMPAGPSIWGSLL 483



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 175/392 (44%), Gaps = 50/392 (12%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           M+A YA+SG +  +  +FN     +   ++S+I  Y+ YG        ++ M   G+   
Sbjct: 111 MVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGD 170

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK---------- 182
            +T   VL+       +  G+  HG  ++     + +V T L+ +Y KC           
Sbjct: 171 YFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFD 230

Query: 183 ---------------------CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIE 221
                                CI  A  +F+  P  +N V+WTTMI+GYSQ+G   +A+ 
Sbjct: 231 NMTIRDVSSWNALLAGYTKSGCIDAALAIFERMP-WRNIVSWTTMISGYSQSGLAQQALS 289

Query: 222 CFRDMRVE--GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
            F +M  E  GV  N  T  S+L ACA +S  + G Q+H      G  +N  V  AL  M
Sbjct: 290 LFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAM 349

Query: 280 YAKCGDLDSARRLLEYSEID--NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
           YAKCG L  AR   +    +  N ++WN+MI  +A  G   +A+S F++M    I+ DD 
Sbjct: 350 YAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDI 409

Query: 338 TYPSVLN-CFASN-IDL-----NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL-DC 389
           T+  +L+ C  S  +D+     N+  + +S  +    E Y  V     D+  + G L + 
Sbjct: 410 TFTGLLSGCSHSGLVDVGLKYFNHMSTTYS--INPRVEHYACV----ADLLGRAGRLAEA 463

Query: 390 AFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           + +V  +        W SL+  C  H + E A
Sbjct: 464 SKLVGEMPMPAGPSIWGSLLAACRKHRNLEMA 495



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 166/361 (45%), Gaps = 36/361 (9%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P   +   V +  +   +L+ G Q H + +       A V + +V  YA    I  +  +
Sbjct: 68  PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSV 127

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F    +  + + + +MI  Y++ G+  + +  +  M   G   + FTFP +L +   + +
Sbjct: 128 FNGIGE-PSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLS 186

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD------------------------- 285
              G  VHG IL  G + ++YV ++LI +Y KCG+                         
Sbjct: 187 VWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAG 246

Query: 286 ------LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD--IKIDDF 337
                 +D+A  + E     N VSW +MI G+++ G  ++ALSLF +M   D  ++ +  
Sbjct: 247 YTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWV 306

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           T  SVL   A    L   + +H L  + G      V  AL  MYAK G+L  A   F+ +
Sbjct: 307 TIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKL 366

Query: 398 --QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
              +K++I+W ++IT  A +G   +A+  F +M  +GI PD +  + +LS C+   +++ 
Sbjct: 367 NRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDV 426

Query: 456 G 456
           G
Sbjct: 427 G 427



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 110/255 (43%), Gaps = 26/255 (10%)

Query: 450 LTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTAL 509
           L +L+ G QVHA  L  G   +  V + +V  YA  G I+ +  VF+ +     + + ++
Sbjct: 83  LNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSM 142

Query: 510 IMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDK-VY 568
           I   A+ G  +  +  Y  M + G   DY TF  +L     + +   + W  + +   + 
Sbjct: 143 IRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVL----KSSVELLSVWMGKCVHGLIL 198

Query: 569 GIKPGPDHYAC--MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGE 626
            I    D Y    +I L G+ G++ +A  + D M    D + W ALL+     G ++   
Sbjct: 199 RIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIR-DVSSWNALLAGYTKSGCID--- 254

Query: 627 RAANNLFELEP-MNAMPYVQLSNMYSTAGKWEDAARVRKLM--KSRGIRKE--------P 675
            AA  +FE  P  N + +  + + YS +G  + A  +   M  +  G+R          P
Sbjct: 255 -AALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLP 313

Query: 676 GC---SWVETNSQVH 687
            C   S +E   Q+H
Sbjct: 314 ACAQLSTLERGRQIH 328


>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 753

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 238/696 (34%), Positives = 388/696 (55%), Gaps = 7/696 (1%)

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           +  E    M + G   +  + + + ++C   G L  G+ FH   ++   + N F+   ++
Sbjct: 63  QVHEFIRNMDIAGISINPRSYEYLFKMCGTLGALSDGKLFHN-RLQRMANSNKFIDNCIL 121

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
            MY  CK    AE  F    D ++  +W T+I+ Y++ G   +A+  F  M   G+  N 
Sbjct: 122 QMYCDCKSFTAAERFFDKIVD-RDLSSWATIISAYTEEGRIDEAVGLFLRMLDLGIIPNF 180

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
             F +++ + A  S  D G Q+H  ++   F A++ +++ + +MY KCG LD A      
Sbjct: 181 SIFSTLIMSFADPSMLDLGKQIHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNK 240

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               + V+   ++VG+ +   +++AL LF KM +  +++D F +  +L   A+  DL   
Sbjct: 241 MTRKSAVACTGLMVGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYTG 300

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           K +HS  +K G E    V   L+D Y K    + A   F  + + +  SW++LI G    
Sbjct: 301 KQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQS 360

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G ++ AL+ F  +R  G+  +  + ++I  AC+ ++ L  G Q+HA  +K G  + LS +
Sbjct: 361 GKFDRALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGE 420

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           ++++ +Y+KCG ++ A++ F ++   D + WTA+I   A +GK  EAL+ + +M   G +
Sbjct: 421 SAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVR 480

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           P+ +TF+GLL ACSH+GL +  + + +SM   YG+ P  DHY CMID+  R+G L+EA  
Sbjct: 481 PNVVTFIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALE 540

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
           ++  M  EPD   WK+LL  C    +LE+G  AA+N+F L+P+++  YV + N+Y+ AGK
Sbjct: 541 VIRSMPFEPDVMSWKSLLGGCWSRRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGK 600

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIK- 714
           W++AA+ RK+M  R +RKE  CSW+    +VH F+  DR HP    IYSK+ E+ +  K 
Sbjct: 601 WDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKELNVSFKK 660

Query: 715 -EAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCH 773
            E   + + N AL +  E   +  L  HSE+LA+A+GL+      PI +FKN R C DCH
Sbjct: 661 GEERLLNEEN-ALCDFTERKDQ--LLDHSERLAIAYGLICTAADTPIMVFKNTRSCKDCH 717

Query: 774 TAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
              K +S V  R +++RD NRFHH  +G CSC DYW
Sbjct: 718 EFAKRVSVVTGRELVVRDGNRFHHINSGECSCRDYW 753



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/464 (28%), Positives = 239/464 (51%), Gaps = 7/464 (1%)

Query: 56  GQLF----EKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNY 111
           G+LF    ++M++ + F  N ++  Y +      A++ F++   ++  +W+++I  Y+  
Sbjct: 99  GKLFHNRLQRMANSNKFIDNCILQMYCDCKSFTAAERFFDKIVDRDLSSWATIISAYTEE 158

Query: 112 GLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV 171
           G   EA  LF +M   G  P+      ++   +   +L  G+Q H   I+  F  +  + 
Sbjct: 159 GRIDEAVGLFLRMLDLGIIPNFSIFSTLIMSFADPSMLDLGKQIHSQLIRIEFAADISIE 218

Query: 172 TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV 231
           T + +MY KC  +  AE         K+ VA T ++ GY+Q      A+  F  M  EGV
Sbjct: 219 TLISNMYVKCGWLDGAEVATNKMTR-KSAVACTGLMVGYTQAARNRDALLLFSKMISEGV 277

Query: 232 ESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR 291
           E + F F  IL ACAA+     G Q+H   +  G E+ V V + L+D Y KC   ++AR+
Sbjct: 278 ELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQ 337

Query: 292 LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID 351
             E     N+ SW+++I G+ + G    AL +FK + ++ + ++ F Y ++    ++  D
Sbjct: 338 AFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACSAVSD 397

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
           L     +H+  +K G   Y    +A+I MY+K G +D A   F  +   D ++WT++I  
Sbjct: 398 LICGAQIHADAIKKGLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICA 457

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ-VHAVFLKSGGCS 470
            AYHG   EAL+ F +M+ SG+ P+ V    +L+AC+   +++ G+Q + ++  K G   
Sbjct: 458 HAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTDKYGVNP 517

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSM-HTRDVITWTALIMGC 513
           ++   N ++ +Y++ G + +A  V  SM    DV++W +L+ GC
Sbjct: 518 TIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMSWKSLLGGC 561



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 9/116 (7%)

Query: 47  SNSGEIDEAGQLFEKMSDRDGFT-----WNTMIAAYANSGRLREAKKLFNETPFK-NFFT 100
           S+SG + E  Q  + M+D+ G       +N MI  Y+ +G L EA ++    PF+ +  +
Sbjct: 494 SHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMS 553

Query: 101 WSSLIYG-YSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
           W SL+ G +S   L+I         +L+    + Y +  +  L +L G      QF
Sbjct: 554 WKSLLGGCWSRRNLEIGMIAADNIFRLDPLDSATYVI--MFNLYALAGKWDEAAQF 607


>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1217

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 247/654 (37%), Positives = 365/654 (55%), Gaps = 37/654 (5%)

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGY 215
           H   I      N+ +   L+  YA  K +  A  +F   P+ +N +    MI  Y  NG+
Sbjct: 63  HSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPE-RNVIIINVMIRSYVNNGF 121

Query: 216 GFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSA 275
             + I+ F  M    V+ + +TFP +L AC+       G ++HG     G  + ++V + 
Sbjct: 122 YREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNG 181

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           L+ MY KCG L  AR +L+     + VSWNS++ G+A+     +AL + ++M +  I  D
Sbjct: 182 LVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHD 241

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
             T  S+L        ++N  + + + VK              DM+ K G          
Sbjct: 242 AGTMASLLPA------VSNTTTENVMYVK--------------DMFFKMGK--------- 272

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
               K ++SW  +I     +    EA++ +S M   G  PD V ++S+L AC + + L  
Sbjct: 273 ----KSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSL 328

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
           G+++H    +     +L ++N+L+ +YAKCGC++ A  VF++M +RDV++WTA+I     
Sbjct: 329 GKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGF 388

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
           +G+G +A+  + +M   G  PD I FV  L ACSHAGL E  R  F+ M   Y I P  +
Sbjct: 389 SGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLE 448

Query: 576 HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
           H ACM+DLLGR+GK+ EA   + +M  EP+  VW ALL ACRVH + ++G  AA+ LF+L
Sbjct: 449 HLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQL 508

Query: 636 EPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG 695
            P  +  YV LSN+Y+ AG+WE+   +R +MKS+G++K PG S VE N  +H F+  DR 
Sbjct: 509 APEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRS 568

Query: 696 HPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLP 755
           HP   +IY ++D ++  +KE GYVPD   ALH+VEEE KE  LA HSEKLA+ F L+   
Sbjct: 569 HPQSAEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTE 628

Query: 756 Q---GAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCG 806
           +      IRI KNLR+CGDCH A K IS +  R II+RD+NRFH F+ G CSC 
Sbjct: 629 EEDSNNAIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 682



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 170/376 (45%), Gaps = 14/376 (3%)

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           VH  I+S     N  +   L+  YA   D+ +AR++ +     N +  N MI  +   GF
Sbjct: 62  VHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGF 121

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
           ++E + +F  M +  +K D +T+P VL   + + ++   K +H    K G     FV N 
Sbjct: 122 YREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNG 181

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           L+ MY K G L  A +V + M  +DV+SW SL+ G A +  +++AL+   +M    I  D
Sbjct: 182 LVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHD 241

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFD 496
              ++S+L A +  T  E    V  +F K G  S +S  N ++ VY K     +A  ++ 
Sbjct: 242 AGTMASLLPAVSN-TTTENVMYVKDMFFKMGKKSLVSW-NVMIGVYMKNAMPVEAVELYS 299

Query: 497 SMHT----RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
            M       D ++ T+++  C          + +  +  +   P+ +    L+   +  G
Sbjct: 300 GMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCG 359

Query: 553 LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE---PDATVW 609
             + AR  FE+M     +      +  MI   G SG+  +A AL  +M      PD+  +
Sbjct: 360 CLDRARDVFENMKSRDVVS-----WTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAF 414

Query: 610 KALLSACRVHGDLELG 625
              L+AC   G LE G
Sbjct: 415 VTTLAACSHAGLLEEG 430



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 16/342 (4%)

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
           F    VL+ +    DL   ++VHS I+         +   L+  YA   ++  A  VF+ 
Sbjct: 44  FMLGQVLDTYP---DLKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDE 100

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
           + +++VI    +I     +G Y E ++ F  M    + PDH     +L AC+    +  G
Sbjct: 101 IPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIG 160

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
           +++H    K G  S+L V N LV +Y KCG +++A  V D M  RDV++W +L+ G AQN
Sbjct: 161 KKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQN 220

Query: 517 GKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH 576
            +  +AL+   +M +     D  T   LL A S+    EN   Y + M    G K     
Sbjct: 221 QRFDDALEVCREMESVKISHDAGTMASLLPAVSNT-TTENV-MYVKDMFFKMG-KKSLVS 277

Query: 577 YACMIDLLGRSGKLIEAKALLDQMVG---EPDATVWKALLSACRVHGDLELGERAANNLF 633
           +  MI +  ++   +EA  L   M     EPDA    ++L AC     L LG++      
Sbjct: 278 WNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGY-- 335

Query: 634 ELEPMNAMPYVQLSN----MYSTAGKWEDAARVRKLMKSRGI 671
            +E    +P + L N    MY+  G  + A  V + MKSR +
Sbjct: 336 -IERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDV 376



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 113/256 (44%), Gaps = 40/256 (15%)

Query: 58  LFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEA 117
           +F KM  +   +WN MI  Y                  KN               + +EA
Sbjct: 266 MFFKMGKKSLVSWNVMIGVY-----------------MKN--------------AMPVEA 294

Query: 118 FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
            EL+  M+ +G+ P   ++ +VL  C     L  G++ HGY  +     N  +   L+DM
Sbjct: 295 VELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDM 354

Query: 178 YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
           YAKC C+  A  +F+     ++ V+WT MI+ Y  +G G  A+  F  M+  G+  +   
Sbjct: 355 YAKCGCLDRARDVFENM-KSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIA 413

Query: 238 FPSILTACAAVSARDFGAQVHGC--ILSSGFEANVYVQ--SALIDMYAKCGDLDSARRLL 293
           F + L AC+     + G     C  +++  ++    ++  + ++D+  + G +  A + +
Sbjct: 414 FVTTLAACSHAGLLEEG---RSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFI 470

Query: 294 EYSEID-NEVSWNSMI 308
           +   ++ NE  W +++
Sbjct: 471 QEMPMEPNERVWGALL 486



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 68/179 (37%), Gaps = 49/179 (27%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           L  AL+D ++  G +D A  +FE M  RD  +W  MI+AY  SGR               
Sbjct: 347 LENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGR--------------- 391

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                         G D  A  LF +MQ  G  P        L  CS  GLL+ G     
Sbjct: 392 --------------GCD--AVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEG----- 430

Query: 158 YAIKTCFDL--NAFVVTG-------LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
              ++CF L  + + +T        +VD+  +   + EA    +  P   N   W  ++
Sbjct: 431 ---RSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALL 486


>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 646

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 233/604 (38%), Positives = 348/604 (57%), Gaps = 19/604 (3%)

Query: 217 FKAIECFRDMR-------VEGVESNQFTFPSILTACAAV----SARDFGAQVHGCILSSG 265
           F+A    R +R         G  +++FT   ++ A A +    +AR+   ++        
Sbjct: 51  FRACRALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP------- 103

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
              NV   + L   Y K GDL  AR+L +     N  +WN+M+ G    GF +E+L  F 
Sbjct: 104 -RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFL 162

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
            M    +  D+F   SV  C A   D+   + VH+ +V++G +    V ++L  MY + G
Sbjct: 163 DMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCG 222

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
            L     V  ++    ++S  ++I G   +G  E AL+YF  MR  G+  D V   S +S
Sbjct: 223 CLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAIS 282

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
           +C++L  L  GQQ+H   +K+G    + V   LV +Y++CGC+ D+ RVF      D   
Sbjct: 283 SCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFL 342

Query: 506 WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMD 565
            +A+I     +G G++A++ + QM+  G +P  +TF+ LL+ACSH+GL E     FE M 
Sbjct: 343 LSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMT 402

Query: 566 KVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELG 625
           K YG++P   HY C++DLLGRSG L EA+AL+  M   PD  +WK LLSAC+   + ++ 
Sbjct: 403 KTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMA 462

Query: 626 ERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQ 685
           ER A  + EL+P ++  YV LSN+ +T+ +W D + VRK M+   +RKEPG SWVE    
Sbjct: 463 ERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGH 522

Query: 686 VHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKL 745
           +H F + D  HP + +I   ++E+M  I++ GY PDM+  LH++E+E KE+ L++HSEKL
Sbjct: 523 IHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKL 582

Query: 746 AVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSC 805
           A+AF  L+LP+G PIR+ KNLRVC DCH A+K +S V  R I++RD +RFHHFK G CSC
Sbjct: 583 AIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSC 642

Query: 806 GDYW 809
            DYW
Sbjct: 643 RDYW 646



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 214/413 (51%), Gaps = 10/413 (2%)

Query: 15  CRSKIIGPARYTHNVGNSVKPASD---LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWN 71
           CR+  + P R  H    +   A+D    N  ++ +++ G++  A +LFE++  R+  +WN
Sbjct: 54  CRA--LRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMSWN 111

Query: 72  TMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRP 131
            +   Y  +G L  A+KLF+E P +N  TW++++ G +N G D E+   F  M+ EG  P
Sbjct: 112 ILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHP 171

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
            ++ L +V R C+    +  G Q H Y +++  D +  V + L  MY +C C+ E E + 
Sbjct: 172 DEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVL 231

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
           +M P   + V+  T+I G +QNG    A+E F  MR  GV ++  TF S +++C+ ++A 
Sbjct: 232 RMLPS-LSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAAL 290

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDL-DSARRLLEYSEIDNEVSWNSMIVG 310
             G Q+HG ++ +G +  V V + L+ MY++CG L DS R    Y   D  +  ++MI  
Sbjct: 291 AQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFL-LSAMISA 349

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT-GFEG 369
           +   G  ++A+ LFK+M     +  D T+ ++L   + +           L+ KT G + 
Sbjct: 350 YGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQP 409

Query: 370 YKFVNNALIDMYAKQGNLDCA-FMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
                  ++D+  + G LD A  ++ ++    D + W +L++ C    +++ A
Sbjct: 410 SVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMA 462



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 191/441 (43%), Gaps = 18/441 (4%)

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ----LEGYRPSQYT 135
           +GRLR+A +     PF+    WS     +S+      A     Q+       G    ++T
Sbjct: 24  TGRLRDALR----RPFRGVL-WSDAARLFSHLFRACRALRPLRQLHAFAATSGAATDRFT 78

Query: 136 LDNV-LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
            +++ L    L  L    E F     +     N      L   Y K   +  A  LF   
Sbjct: 79  ANHLMLAYADLGDLTAARELFERIPRRNVMSWNI-----LFGGYIKNGDLGGARKLFDEM 133

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
           P+ +N   W  M+ G +  G+  +++  F DMR EG+  ++F   S+   CA +     G
Sbjct: 134 PE-RNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTG 192

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
            QVH  ++ SG + ++ V S+L  MY +CG L     +L      + VS N++I G  + 
Sbjct: 193 RQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQN 252

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
           G  + AL  F  M +  +  D  T+ S ++  +    L   + +H  ++K G +    V 
Sbjct: 253 GDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVM 312

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
             L+ MY++ G L  +  VF      D    +++I+   +HG  ++A++ F  M   G  
Sbjct: 313 TCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAE 372

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAKCGCINDANR 493
           P  V   ++L AC+   + E G     +  K+ G   S+     +V +  + GC+++A  
Sbjct: 373 PSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEA 432

Query: 494 VFDSMH-TRDVITWTALIMGC 513
           +  SM  T D + W  L+  C
Sbjct: 433 LILSMPLTPDGVIWKTLLSAC 453


>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 599

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 245/603 (40%), Positives = 356/603 (59%), Gaps = 67/603 (11%)

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA-RQGFHKEALSLFKK 326
           +NV   + +I  + + GDL+SA R+ E   +   V+WNSM+ G++ R+G  K A  LF +
Sbjct: 3   SNVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDR 62

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAK------------SVHSLIVKTGFEGYKFVN 374
           +   DI    F+Y  +L C+  N D+ +A+            S +++I  +GF     ++
Sbjct: 63  IPEPDI----FSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMI--SGFSQNGMMD 116

Query: 375 -----------------NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
                            NA+I  Y + G+LD A  +F +   + V++WT++ITG    G 
Sbjct: 117 QARELFLVMPVRNSVSWNAMISGYVESGDLDLAKQLFEVAPVRSVVAWTAMITGFMKFGK 176

Query: 418 YEEALKYFSDMRI-------------------------------SGICPDHVVVSSILSA 446
            E A KYF +M +                               SG  P+   +SS+L  
Sbjct: 177 IELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLG 236

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITW 506
           C+ L+ L+ G+QVH +  KS    +++   SL+ +Y KCG + DA ++F  M  +DV+TW
Sbjct: 237 CSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTW 296

Query: 507 TALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDK 566
            A+I G AQ+G G++AL  +D+M   G KPD+ITFV +L AC+HAG  +    YF SM +
Sbjct: 297 NAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVR 356

Query: 567 VYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGE 626
            YG++  PDHY C++DLLGR GKL+EA  L+ +M  +P + ++  LL ACR+H +LEL E
Sbjct: 357 DYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHKNLELAE 416

Query: 627 RAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQV 686
            AA NL  L+P +A  YVQL+N+Y+   +W+  A VR+ MK   + K PG SW+E  S V
Sbjct: 417 FAAKNLLNLDPESAAGYVQLANVYAAMNRWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVV 476

Query: 687 HIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLA 746
           H F S DR HP    I+ K++E+   ++ AGYVPD+ +ALH+V EE K+  L  HSEKLA
Sbjct: 477 HEFRSGDRIHPELAFIHEKLNELERKMRLAGYVPDLEYALHDVGEEQKKQILLRHSEKLA 536

Query: 747 VAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCG 806
           +A+GL+ +P G PIR+FKNLRVCGDCH+A KYISA+  R II+RD+ RFHHF+ G CSCG
Sbjct: 537 IAYGLIRMPLGTPIRVFKNLRVCGDCHSATKYISAIEGRVIIVRDTTRFHHFRQGECSCG 596

Query: 807 DYW 809
           DYW
Sbjct: 597 DYW 599



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 192/395 (48%), Gaps = 16/395 (4%)

Query: 32  SVKPASDLNRALVDFSNS-GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF 90
           +VK     N  L  +SN  G+I  A QLF+++ + D F++N M+A Y ++  +  A+  F
Sbjct: 32  TVKTTVTWNSMLAGYSNRRGKIKVARQLFDRIPEPDIFSYNIMLACYLHNADVESARLFF 91

Query: 91  NETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQ 150
           ++ P K+  +W+++I G+S  G+  +A ELF  M +          ++V     + G ++
Sbjct: 92  DQMPVKDTASWNTMISGFSQNGMMDQARELFLVMPVR---------NSVSWNAMISGYVE 142

Query: 151 RGEQFHGYAIKTCFDLNAFVV-TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
            G+      +     + + V  T ++  + K   I  AE  F+  P  KN V W  MI G
Sbjct: 143 SGDLDLAKQLFEVAPVRSVVAWTAMITGFMKFGKIELAEKYFEEMP-MKNLVTWNAMIAG 201

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
           Y +N      ++ F+ M   G   N  +  S+L  C+ +SA   G QVH  I  S    N
Sbjct: 202 YIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWN 261

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA 329
           +   ++L+ MY KCGDL+ A +L       + V+WN+MI G+A+ G  ++AL LF KM  
Sbjct: 262 ITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRD 321

Query: 330 RDIKIDDFTYPSVLNC--FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL 387
             +K D  T+ +VL+    A  +DL   +  +S++   G E        ++D+  + G L
Sbjct: 322 EGMKPDWITFVAVLSACNHAGFVDL-GIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKL 380

Query: 388 DCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEA 421
             A  +   M  K   + + +L+  C  H + E A
Sbjct: 381 VEAVDLIKKMPFKPHSAIFGTLLGACRIHKNLELA 415


>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
          Length = 760

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 251/699 (35%), Positives = 378/699 (54%), Gaps = 73/699 (10%)

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
           Q+T+ N L   S    L +  Q H + +KT    +  + T L+  YA   C  +A  +  
Sbjct: 15  QHTILNCLN--STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLD 72

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
           + P+  N  +++T+I  +S+      A+  F  M   G+  +    PS + ACA +SA  
Sbjct: 73  LVPE-PNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALK 131

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE------------------ 294
              QVHG    SGF+++ +VQS+L+ MY KC  +  A R+ +                  
Sbjct: 132 PARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYA 191

Query: 295 -----------YSEI------DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
                      +SE+       N +SWN MI GF   G + EA+ +F  MH R  + D  
Sbjct: 192 RQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGT 251

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK-------------- 383
           T  SVL       DL     +H  ++K G    K V++ALIDMY K              
Sbjct: 252 TISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQM 311

Query: 384 -----------------QGNLDCAFMVFNLMQDK----DVISWTSLITGCAYHGSYEEAL 422
                             G ++ +  +F  ++D+    +V+SWTS+I  C+ +G   EAL
Sbjct: 312 DHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEAL 371

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
           + F +M+I+G+ P+ V +  +L AC  +  L  G+  H   L+ G  + + V ++L+ +Y
Sbjct: 372 ELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMY 431

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
           AKCG I  +   FD + T++++ W A+I G A +GK KEA++ +D M   G KPD I+F 
Sbjct: 432 AKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFT 491

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
            +L ACS +GL E   +YF SM   YGI+   +HYACM+ LL R+GKL +A A++ +M  
Sbjct: 492 CVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPV 551

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
            PDA VW ALLS+CRVH ++ LGE AA  LFELEP N   Y+ LSN+Y++ G W +  RV
Sbjct: 552 NPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRV 611

Query: 663 RKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDM 722
           R +MK++G+RK PGCSW+E  ++VH+ ++ D+ HP  T I   +D++ + +K+ GY P++
Sbjct: 612 RDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIENLDKLSMEMKKLGYFPEI 671

Query: 723 NFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIR 761
           NF L +VEE+ KE  L  HSEKLAV FGLL  P G P++
Sbjct: 672 NFVLQDVEEQDKEQILCGHSEKLAVVFGLLNTPPGYPLQ 710



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 134/439 (30%), Positives = 213/439 (48%), Gaps = 43/439 (9%)

Query: 20  IGPARYTHNVGNSVKPASD--LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAA 76
           + PAR  H + +     SD  +  +LV  +    +I +A ++F++M + D  +W+ ++AA
Sbjct: 130 LKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAA 189

Query: 77  YANSGRLREAKKLFNETP----FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           YA  G + EAK+LF+E        N  +W+ +I G+++ GL  EA  +F  M L G+ P 
Sbjct: 190 YARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPD 249

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE---- 188
             T+ +VL        L  G   HGY IK     +  V + L+DMY KC C  E      
Sbjct: 250 GTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFD 309

Query: 189 ------------YLFKMFPDGK------------------NHVAWTTMITGYSQNGYGFK 218
                       ++F +  +G+                  N V+WT+MI   SQNG   +
Sbjct: 310 QMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDME 369

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID 278
           A+E FR+M++ GV+ N  T P +L AC  ++A   G   H   L  G   +VYV SALID
Sbjct: 370 ALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALID 429

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
           MYAKCG + ++R   +     N V WN++I G+A  G  KEA+ +F  M     K D  +
Sbjct: 430 MYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIIS 489

Query: 339 YPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNL 396
           +  VL+ C  S +    +   +S+  K G E        ++ + ++ G L+ A+ M+  +
Sbjct: 490 FTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRM 549

Query: 397 MQDKDVISWTSLITGCAYH 415
             + D   W +L++ C  H
Sbjct: 550 PVNPDACVWGALLSSCRVH 568



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 141/519 (27%), Positives = 230/519 (44%), Gaps = 71/519 (13%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D      +++ YAN+    +A  + +  P  N F++S+LIY +S +     A   F QM 
Sbjct: 47  DTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQML 106

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK--- 182
             G  P    L + ++ C+    L+   Q HG A  + FD ++FV + LV MY KC    
Sbjct: 107 TRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIR 166

Query: 183 ----------------------------CIFEAEYLFKMFPDG---KNHVAWTTMITGYS 211
                                       C+ EA+ LF    D     N ++W  MI G++
Sbjct: 167 DAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFN 226

Query: 212 QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVY 271
            +G   +A+  F DM + G E +  T  S+L A   +     G  +HG ++  G  ++  
Sbjct: 227 HSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKC 286

Query: 272 VQSALIDMYAKC-------------------------------GDLDSARRLLEYSEID- 299
           V SALIDMY KC                               G ++S+ RL    +   
Sbjct: 287 VSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQG 346

Query: 300 ---NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              N VSW SMI   ++ G   EAL LF++M    +K +  T P +L    +   L + K
Sbjct: 347 MELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGK 406

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
           + H   ++ G     +V +ALIDMYAK G +  + + F+ +  K+++ W ++I G A HG
Sbjct: 407 AAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHG 466

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ-QVHAVFLKSGGCSSLSVD 475
             +EA++ F  M+ SG  PD +  + +LSAC++  + E G    +++  K G  + +   
Sbjct: 467 KAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHY 526

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
             +V + ++ G +  A  +   M    D   W AL+  C
Sbjct: 527 ACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSC 565



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 131/247 (53%), Gaps = 2/247 (0%)

Query: 327 MHARDIKIDDFTYPSVLNCFASNI-DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           + A+ + + D    ++LNC  S    L+  +  H+ I+KTG      +   L+  YA   
Sbjct: 3   LSAQALALLDSVQHTILNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNM 62

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
               A +V +L+ + +V S+++LI   +    +  AL  FS M   G+ PD+ V+ S + 
Sbjct: 63  CFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVK 122

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
           ACA L+ L+  +QVH +   SG  S   V +SLV +Y KC  I DA+RVFD M   DV++
Sbjct: 123 ACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVS 182

Query: 506 WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMD 565
           W+AL+   A+ G   EA + + +M   G +P+ I++ G++   +H+GL   A   F  M 
Sbjct: 183 WSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDM- 241

Query: 566 KVYGIKP 572
            + G +P
Sbjct: 242 HLRGFEP 248


>gi|356534091|ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic-like [Glycine max]
          Length = 903

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 256/737 (34%), Positives = 402/737 (54%), Gaps = 17/737 (2%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
            T++  Y       E  KL       +  +W+++I          EA +L+ +M   G  
Sbjct: 156 TTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSEALQLYVKMIEAGIY 215

Query: 131 PSQYTLDNVLRLCSLKGLLQ-RGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           P+++T   +L + S  GL +  G+  H   I    ++N  + T ++ MYAKC+ + +A  
Sbjct: 216 PNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLMLKTAIICMYAKCRRMEDAIK 275

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           + +  P   +   WT++I+G+ QN    +A+    DM + G+  N FT+ S+L A ++V 
Sbjct: 276 VSQQTPK-YDVCLWTSIISGFVQNSQVREAVNALVDMELSGILPNNFTYASLLNASSSVL 334

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS-ARRLLEYSEIDNEVSWNSMI 308
           + + G Q H  ++  G E ++YV +AL+DMY KC    +   +      + N +SW S+I
Sbjct: 335 SLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNGVKAFRGIALPNVISWTSLI 394

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
            GFA  GF +E++ LF +M A  ++ + FT  ++L   +    +   K +H  I+KT  +
Sbjct: 395 AGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVD 454

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
               V NAL+D YA  G  D A+ V  +M  +D+I++T+L       G +E AL+  + M
Sbjct: 455 IDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDIITYTTLAARLNQQGDHEMALRVITHM 514

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
               +  D   ++S +SA A L ++E G+Q+H    KSG     SV NSLV  Y+KCG +
Sbjct: 515 CNDEVKMDEFSLASFISAAAGLGIMETGKQLHCYSFKSGFERCNSVSNSLVHSYSKCGSM 574

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
            DA RVF  +   D ++W  LI G A NG   +AL  +D M   G KPD +TF+ L+FAC
Sbjct: 575 RDAYRVFKDITEPDRVSWNGLISGLASNGLISDALSAFDDMRLAGVKPDSVTFLSLIFAC 634

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           S   L      YF SM+K Y I P  DHY C++DLLGR G+L EA  +++ M  +PD+ +
Sbjct: 635 SQGSLLNQGLDYFYSMEKTYHITPKLDHYVCLVDLLGRGGRLEEAMGVIETMPFKPDSVI 694

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           +K LL+AC +HG++ LGE  A    EL+P +   Y+ L+++Y  AG  +   + RKLM+ 
Sbjct: 695 YKTLLNACNLHGNVPLGEDMARRCLELDPCDPAIYLLLASLYDNAGLPDFGDKTRKLMRE 754

Query: 669 RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHN 728
           RG+R+ P   W+E  S++++F + ++      +I  K++ ++  IK  GY          
Sbjct: 755 RGLRRSPRQCWMEVKSKIYLFSAREKIG--NDEINEKLESLITEIKNRGYPYQ------- 805

Query: 729 VEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHII 788
            E E K     YHSE+LA+AFG+L++P  APIRI KN  +C  CH+ +  ++    R II
Sbjct: 806 -ESEDK----LYHSEQLALAFGVLSVPTLAPIRINKNSLICTHCHSFIMLLTQFVDREII 860

Query: 789 LRDSNRFHHFKAGNCSC 805
           +RD  RFH FK G CSC
Sbjct: 861 VRDRKRFHVFKDGQCSC 877



 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 164/561 (29%), Positives = 284/561 (50%), Gaps = 13/561 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +  N ++  YA    + +A+ LF+E P ++  +W++L+  ++      EA +LF  M 
Sbjct: 50  DLYLSNNLLCLYAKCFGVGQARHLFDEMPHRDVVSWTTLLSAHTRNKHHFEALQLFDMML 109

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G  P+++TL + LR CS  G  + G + H   +K   +LN  + T LVD+Y KC C  
Sbjct: 110 GSGQCPNEFTLSSALRSCSALGEFEFGAKIHASVVKLGLELNHVLGTTLVDLYTKCDCTV 169

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           E   L     DG + V+WTTMI+   +     +A++ +  M   G+  N+FTF  +L   
Sbjct: 170 EPHKLLAFVKDG-DVVSWTTMISSLVETSKWSEALQLYVKMIEAGIYPNEFTFVKLLGMP 228

Query: 246 AAVS-ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           + +   + +G  +H  +++ G E N+ +++A+I MYAKC  ++ A ++ + +   +   W
Sbjct: 229 SFLGLGKGYGKVLHSQLITFGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLW 288

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
            S+I GF +    +EA++    M    I  ++FTY S+LN  +S + L   +  HS ++ 
Sbjct: 289 TSIISGFVQNSQVREAVNALVDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIM 348

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDC-AFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
            G EG  +V NAL+DMY K  +        F  +   +VISWTSLI G A HG  EE+++
Sbjct: 349 VGLEGDIYVGNALVDMYMKCSHTTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQ 408

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            F++M+ +G+ P+   +S+IL AC+++  +   +++H   +K+     ++V N+LV  YA
Sbjct: 409 LFAEMQAAGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYA 468

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
             G  ++A  V   M+ RD+IT+T L     Q G  + AL+    M     K D  +   
Sbjct: 469 GGGMADEAWSVIGMMNHRDIITYTTLAARLNQQGDHEMALRVITHMCNDEVKMDEFSLAS 528

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLL----GRSGKLIEAKALLDQ 599
            + A +  G+ E  +         Y  K G +    + + L     + G + +A  +   
Sbjct: 529 FISAAAGLGIMETGKQL-----HCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKD 583

Query: 600 MVGEPDATVWKALLSACRVHG 620
            + EPD   W  L+S    +G
Sbjct: 584 -ITEPDRVSWNGLISGLASNG 603



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/426 (31%), Positives = 225/426 (52%), Gaps = 8/426 (1%)

Query: 129 YRPSQY--TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
           + P ++  T   VL LC+ +  L+ G   H   IK     + ++   L+ +YAKC  + +
Sbjct: 11  FSPCRFRETCLQVLSLCNSQ-TLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQ 69

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A +LF   P  ++ V+WTT+++ +++N + F+A++ F  M   G   N+FT  S L +C+
Sbjct: 70  ARHLFDEMPH-RDVVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCS 128

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
           A+   +FGA++H  ++  G E N  + + L+D+Y KC       +LL + +  + VSW +
Sbjct: 129 ALGEFEFGAKIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTT 188

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN--AKSVHSLIVK 364
           MI          EAL L+ KM    I  ++FT+  +L    S + L     K +HS ++ 
Sbjct: 189 MISSLVETSKWSEALQLYVKMIEAGIYPNEFTFVKLLG-MPSFLGLGKGYGKVLHSQLIT 247

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            G E    +  A+I MYAK   ++ A  V       DV  WTS+I+G   +    EA+  
Sbjct: 248 FGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNA 307

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
             DM +SGI P++   +S+L+A + +  LE G+Q H+  +  G    + V N+LV +Y K
Sbjct: 308 LVDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMK 367

Query: 485 CG-CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           C     +  + F  +   +VI+WT+LI G A++G  +E++Q + +M A G +P+  T   
Sbjct: 368 CSHTTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLST 427

Query: 544 LLFACS 549
           +L ACS
Sbjct: 428 ILGACS 433



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 151/310 (48%), Gaps = 8/310 (2%)

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
           L     VHS I+K G +   +++N L+ +YAK   +  A  +F+ M  +DV+SWT+L++ 
Sbjct: 32  LKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEMPHRDVVSWTTLLSA 91

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
              +  + EAL+ F  M  SG CP+   +SS L +C+ L   EFG ++HA  +K G   +
Sbjct: 92  HTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHASVVKLGLELN 151

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
             +  +LV +Y KC C  + +++   +   DV++WT +I    +  K  EALQ Y +M+ 
Sbjct: 152 HVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSEALQLYVKMIE 211

Query: 532 RGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLI 591
            G  P+  TFV LL   S  GL +       S    +G++        +I +  +  ++ 
Sbjct: 212 AGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLMLKTAIICMYAKCRRME 271

Query: 592 EAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP----YVQLS 647
           +A   + Q   + D  +W +++S    +  +     A N L ++E    +P    Y  L 
Sbjct: 272 DAIK-VSQQTPKYDVCLWTSIISGFVQNSQV---REAVNALVDMELSGILPNNFTYASLL 327

Query: 648 NMYSTAGKWE 657
           N  S+    E
Sbjct: 328 NASSSVLSLE 337



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 97/199 (48%), Gaps = 1/199 (0%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G + +   D D    N ++ AYA  G   EA  +      ++  T+++L    +  G   
Sbjct: 446 GYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDIITYTTLAARLNQQGDHE 505

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
            A  +   M  +  +  +++L + +   +  G+++ G+Q H Y+ K+ F+    V   LV
Sbjct: 506 MALRVITHMCNDEVKMDEFSLASFISAAAGLGIMETGKQLHCYSFKSGFERCNSVSNSLV 565

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
             Y+KC  + +A  +FK   +  + V+W  +I+G + NG    A+  F DMR+ GV+ + 
Sbjct: 566 HSYSKCGSMRDAYRVFKDITE-PDRVSWNGLISGLASNGLISDALSAFDDMRLAGVKPDS 624

Query: 236 FTFPSILTACAAVSARDFG 254
            TF S++ AC+  S  + G
Sbjct: 625 VTFLSLIFACSQGSLLNQG 643


>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
 gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
          Length = 771

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 275/782 (35%), Positives = 426/782 (54%), Gaps = 65/782 (8%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           L   L+D F   G+ D A  +F ++   + ++W+ +I AY +S R+ +A+ LF+  P  +
Sbjct: 44  LTNLLIDLFGKCGDPDAARAVFNRVRLPNEYSWSCIIQAYVSSSRIHDARALFDSMPGFD 103

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
            FTW+ +I  Y+      +A ELF                         G++  G     
Sbjct: 104 AFTWNIMIAAYARINRLDDARELF------------------------HGMIS-GRDVVS 138

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
           +AI             LV  YA+   + EA  LF+  P   + V  T+++ GY+ NG+  
Sbjct: 139 WAI-------------LVAGYARHDRLEEASALFRRMPLW-DTVTCTSVLQGYAHNGHLA 184

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSA-- 275
           +A E F   R+ G      T  + + A    +AR          L+ G  A + +++A  
Sbjct: 185 EAQELFD--RIGGAGDRDATACNAMIAAYGKNAR--------VDLAEGLFAQIKLRNAAS 234

Query: 276 ---LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI 332
              L+  YA+ G LD A++  +     + +++ +M    + QG  + A  + + + A D+
Sbjct: 235 WSLLLLTYAQNGHLDLAKKSFDRMPQRDSIAFTAMTAVLSDQGELRGAREMLRYLSAVDV 294

Query: 333 KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM 392
                 + ++L  ++   DL+  + + S +          V   L+++Y K G +D A  
Sbjct: 295 ----IAWNALLEGYSRTGDLDEVRRLFSAMEHRTV-ATTVVAGTLVNLYGKCGRVDDARR 349

Query: 393 VFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV 452
           V + M  +  +SWT++I   A +G+  EA+  F  M + G  P  + + S++ +CA L  
Sbjct: 350 VLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGT 409

Query: 453 LEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAKCGCINDANRVFDS--MHTRDVITWTAL 509
           L  G+++HA    S   S SL + N+++ +Y KCG +  A  VF+S  + TR V+TWTA+
Sbjct: 410 LSLGKRIHARIRSSPLFSQSLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVVTWTAM 469

Query: 510 IMGCAQNGKGKEALQFYDQMLARG-TKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
           I   AQNG G+EA++ + +M+  G T+P+ +TF+ +L ACSH G  E A  +F SM   +
Sbjct: 470 IRAYAQNGVGEEAIELFQEMVIDGGTEPNRVTFLSVLSACSHLGQLEQAWEHFCSMGPDF 529

Query: 569 GIKPGPDHYACMIDLLGRSGKLIEA-KALLDQMVGEPDATVWKALLSACRVHGDLELGER 627
           G+ P  DHY C++DLLGR+G+L EA K LL     E D   W A LSAC+++GDLE  +R
Sbjct: 530 GVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQR 589

Query: 628 AANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVH 687
           AA  + ELEP N    V LSN+Y+  G+  D AR+R  MKS G++K  G SW+E N++VH
Sbjct: 590 AAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVH 649

Query: 688 IFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAV 747
            F+  D  HP + +IYS+++ +   IKEAGYVPD    L +V+EE K   L YHSE+LA+
Sbjct: 650 EFMVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMVLRDVDEEKKAQLLGYHSERLAM 709

Query: 748 AFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGD 807
           A G+++ P G  +R+ KNLRVC DCH A K+IS +  R II+RD++RFHHFK G CSCGD
Sbjct: 710 ALGIISTPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGD 769

Query: 808 YW 809
           YW
Sbjct: 770 YW 771



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 202/438 (46%), Gaps = 45/438 (10%)

Query: 30  GNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKL 89
           G   + A+  N  +  +  +  +D A  LF ++  R+  +W+ ++  YA +G L  AKK 
Sbjct: 195 GAGDRDATACNAMIAAYGKNARVDLAEGLFAQIKLRNAASWSLLLLTYAQNGHLDLAKKS 254

Query: 90  FNETPFKNFFTWSSLIYGYSNYGLDIEAFELF----------WQMQLEGYRPSQYTLDNV 139
           F+  P ++   ++++    S+ G    A E+           W   LEGY  +   LD V
Sbjct: 255 FDRMPQRDSIAFTAMTAVLSDQGELRGAREMLRYLSAVDVIAWNALLEGYSRTG-DLDEV 313

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKN 199
            RL S              A++        V   LV++Y KC  + +A  +    P  + 
Sbjct: 314 RRLFS--------------AMEHRTVATTVVAGTLVNLYGKCGRVDDARRVLDAMP-VRT 358

Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG 259
            V+WT MI  Y+QNG   +AI  F+ M +EG E +  T  S++ +CA +     G ++H 
Sbjct: 359 SVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHA 418

Query: 260 CILSSG-FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE--VSWNSMIVGFARQGF 316
            I SS  F  ++ + +A+I MY KCG+L+ AR + E   +     V+W +MI  +A+ G 
Sbjct: 419 RIRSSPLFSQSLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVVTWTAMIRAYAQNGV 478

Query: 317 HKEALSLFKKMHARDIKIDDFTYP---SVLNCFASNIDLNNAKSVHSLIVKTGFE-GYKF 372
            +EA+ LF++M      ID  T P   + L+  ++   L   +         G + G   
Sbjct: 479 GEEAIELFQEM-----VIDGGTEPNRVTFLSVLSACSHLGQLEQAWEHFCSMGPDFGVPP 533

Query: 373 VNN---ALIDMYAKQGNLDCAFMVFNLMQD--KDVISWTSLITGCAYHGSYEEALKYFSD 427
             +    L+D+  + G L  A  +    +D   DV+ W + ++ C  +G  E + +  + 
Sbjct: 534 AGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQR--AA 591

Query: 428 MRISGICPDHVVVSSILS 445
            R+S + P++V    +LS
Sbjct: 592 KRVSELEPENVAGRVLLS 609



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 114/481 (23%), Positives = 206/481 (42%), Gaps = 61/481 (12%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           F   + ACA          +H  I  S    N  + + LID++ KCGD D+AR +     
Sbjct: 10  FEERIRACAIGRKLHEAKILHDEIARSPHGDNRRLTNLLIDLFGKCGDPDAARAVFNRVR 69

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
           + NE SW+ +I  +       +A +LF  M       D FT+  ++  +A    L++A+ 
Sbjct: 70  LPNEYSWSCIIQAYVSSSRIHDARALFDSMPG----FDAFTWNIMIAAYARINRLDDARE 125

Query: 358 V-HSLIVKTGFEGYKFVNNA-LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           + H +I      G   V+ A L+  YA+   L+ A  +F  M   D ++ TS++ G A++
Sbjct: 126 LFHGMI-----SGRDVVSWAILVAGYARHDRLEEASALFRRMPLWDTVTCTSVLQGYAHN 180

Query: 416 GSYEEALKYFSDMRISGICP-DHVVVSSILSACAELTVLEFGQQVHA-VFLKSGGCSSLS 473
           G   EA + F   RI G    D    +++++A  +   ++  + + A + L++    SL 
Sbjct: 181 GHLAEAQELFD--RIGGAGDRDATACNAMIAAYGKNARVDLAEGLFAQIKLRNAASWSL- 237

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
               L+L YA+ G ++ A + FD M  RD I +TA+    +  G+    L+   +ML   
Sbjct: 238 ----LLLTYAQNGHLDLAKKSFDRMPQRDSIAFTAMTAVLSDQGE----LRGAREMLRYL 289

Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
           +  D I +  LL   S  G  +  R  F +M+  +           +++L G+ G++ +A
Sbjct: 290 SAVDVIAWNALLEGYSRTGDLDEVRRLFSAME--HRTVATTVVAGTLVNLYGKCGRVDDA 347

Query: 594 KALLDQMV----------------------------------GEPDATVWKALLSACRVH 619
           + +LD M                                    EP      +++ +C V 
Sbjct: 348 RRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVL 407

Query: 620 GDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSW 679
           G L LG+R    +    P+ +   + L+ + +  GK  +    R++ +S  +R     +W
Sbjct: 408 GTLSLGKRIHARIRS-SPLFSQSLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVVTW 466

Query: 680 V 680
            
Sbjct: 467 T 467


>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
 gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
          Length = 829

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 264/784 (33%), Positives = 427/784 (54%), Gaps = 25/784 (3%)

Query: 42  ALVD-FSNSGEIDEAGQLFEK-MSDRDGFTWNTMIAA-----YANSGRLREAKKLFNETP 94
           A++D F++ G++ + G+ F + + +  G   + ++A      Y   G +  A++ F+   
Sbjct: 46  AILDAFASLGDLSQ-GEFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMV 104

Query: 95  FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ 154
            +N  +WS++I  Y+  G   +A ELF +M  EG + +  T  +VL  C+    +  G+ 
Sbjct: 105 VRNVVSWSAMIAAYAQRGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKS 164

Query: 155 FHGYAIKTCFDLNAFVVTG--LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
            H   +     L   V+ G  +V+MY KC  +  A  +F+   + KN V W TMI   S+
Sbjct: 165 IHERIVADGL-LGDDVILGNTIVNMYGKCGEVDLAREVFERM-EAKNAVTWNTMIAACSR 222

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYV 272
           +    +A     +M ++G+  N+ T  S++ ACA + +   G  VH  +   G E++  V
Sbjct: 223 HDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTV 282

Query: 273 QSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI 332
            +AL+++Y KCG L +AR  LE  E  +++SW +++  +AR G  K A+++ K+M    +
Sbjct: 283 ANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGV 342

Query: 333 KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM 392
           K+D FT+ ++L    +   L   + +H  + ++G E    +  AL+DMY K GN D A  
Sbjct: 343 KLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARR 402

Query: 393 VFNLMQD-KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELT 451
            F+ M D +DV  W +L+         +E L  F+ M + G+ PD V   SIL ACA L 
Sbjct: 403 AFDRMSDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLA 462

Query: 452 VLEFGQQVHAVFLKSG------GCSSLSVDNSLVLVYAKCGCINDANRVFDSMH---TRD 502
            L  G+  H+  L+ G        S+  +  S++ +YAKCG + DA   F         D
Sbjct: 463 ALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASD 522

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
           V+ W+A++   +Q G  +EAL+ +  M   G KPD ++FV  +  CSH+GL   A  +F 
Sbjct: 523 VVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVAFFT 582

Query: 563 SMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDL 622
           S+   +GI P   H+AC++DLL R+G + EA+AL+ +       + W  LLSACR +GDL
Sbjct: 583 SLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAPLGAHHSTWMTLLSACRTYGDL 642

Query: 623 ELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVET 682
           E   R A  L  L   +A  Y  L++++  + KW+D    R+ +  RG   +PGCSW+E 
Sbjct: 643 ERARRVAARLASLRSGSA--YSLLASVFCLSRKWDDVRNARQSLVERGFITQPGCSWIEI 700

Query: 683 NSQVH-IFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYH 741
           N++V+  F  +DR  P   +I+++++ + + I++AGY  D    +H+  E+ K+  L+YH
Sbjct: 701 NNRVYEFFAGDDRLLPREEEIFAELERLCVEIRKAGYERDPIKKVHDHGEQEKKFLLSYH 760

Query: 742 SEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAG 801
           SEK+AV FGL++ P+G P+RI KN+ VC DCH  +K IS V  R I LRD   FH F  G
Sbjct: 761 SEKVAVVFGLISTPEGTPLRIVKNIGVCQDCHEVIKCISEVADRVITLRDDRSFHQFSHG 820

Query: 802 NCSC 805
           +CSC
Sbjct: 821 SCSC 824



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 161/557 (28%), Positives = 265/557 (47%), Gaps = 14/557 (2%)

Query: 96  KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
           ++ F+W+  I  Y+  G    A E+F  M LEG  P + +   +L   +  G L +GE F
Sbjct: 4   RSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQGEFF 63

Query: 156 HGYAIKTC-FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
           H    +      +  V T ++ MY +C  +  A   F      +N V+W+ MI  Y+Q G
Sbjct: 64  HRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMV-VRNVVSWSAMIAAYAQRG 122

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN-VYVQ 273
           +   A+E F  M  EGV++N  TF S+L ACA++ A   G  +H  I++ G   + V + 
Sbjct: 123 HPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVILG 182

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
           + +++MY KCG++D AR + E  E  N V+WN+MI   +R   +KEA +L  +M    ++
Sbjct: 183 NTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLR 242

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
            +  T  SV++  A    +   + VH ++   G E    V NAL+++Y K G L  A   
Sbjct: 243 PNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHA 302

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
              ++ +D ISWT+L+   A HG  + A+     M   G+  D     ++L +C  +  L
Sbjct: 303 LEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAAL 362

Query: 454 EFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMG 512
             G+++H    +SG      +  +LV +Y KCG  + A R FD M   RDV  W AL+  
Sbjct: 363 ALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAA 422

Query: 513 CAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH-----AGLAENARWYFESMDKV 567
                +GKE L  + +M  +G  PD +TF+ +L AC+       G   ++R     +   
Sbjct: 423 YVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDR 482

Query: 568 YGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM--VGEPDATVWKALLSACRVHGDLELG 625
             +         +I++  + G L +AKA   +       D   W A+++A   +    L 
Sbjct: 483 QAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAA---YSQFGLS 539

Query: 626 ERAANNLFELEPMNAMP 642
           E A    + ++     P
Sbjct: 540 EEALRCFYSMQQEGVKP 556



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 132/264 (50%), Gaps = 20/264 (7%)

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
           M D+   SW   I   A +G +  AL+ F  M + G+ PD V   +IL A A L  L  G
Sbjct: 1   MADRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQG 60

Query: 457 QQVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
           +  H    ++ G  S + V  +++ +Y +CG ++ A R FD+M  R+V++W+A+I   AQ
Sbjct: 61  EFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQ 120

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESM--DKVYG--IK 571
            G   +AL+ + +M   G K + ITFV +L AC+        +   E +  D + G  + 
Sbjct: 121 RGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVI 180

Query: 572 PGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVH----------GD 621
            G      ++++ G+ G++  A+ + ++M  + +A  W  +++AC  H          G+
Sbjct: 181 LGN----TIVNMYGKCGEVDLAREVFERMEAK-NAVTWNTMIAACSRHDRYKEAFALLGE 235

Query: 622 LELGERAANNLFELEPMNAMPYVQ 645
           ++L     N +  +  ++A  ++Q
Sbjct: 236 MDLDGLRPNKITLVSVIDACAWMQ 259


>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
          Length = 734

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 248/717 (34%), Positives = 385/717 (53%), Gaps = 51/717 (7%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  +   +  RL    G     +  H  +++ C   ++ +  GL            A  +
Sbjct: 31  PQTFIFHSSARLLPEAGACAAKKAIHRQSVRGCVPSSSVIARGL----------HNAHRV 80

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE--GVESNQFTFPSILTACAAV 248
           F   P  ++  AWT++I+G ++ G     +  F +M  E      N F    +L  CA +
Sbjct: 81  FDGTPT-RSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCCAGL 139

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR----------------- 291
              + G ++HG IL SG   +V + +A++DMYAKCGD   ARR                 
Sbjct: 140 GDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVI 199

Query: 292 --------------LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
                         L + S + +  SWN+++ G  R G   EAL   ++M    +   ++
Sbjct: 200 RACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNY 259

Query: 338 TYPSV--LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
           TY  V  L    S+ DL   + +H  +V    E   FV  +L+DMY K G ++ A  +F+
Sbjct: 260 TYSMVFALAGLLSSRDL--GRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFD 317

Query: 396 LMQD---KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV 452
              D       +W++++ G   +G  EEAL++F  M   G+     +++S+ SACA   +
Sbjct: 318 RWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGM 377

Query: 453 LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMG 512
           +E G+QVH    K G      + +++V +Y+K G + DA R+F S  T++V  WT ++  
Sbjct: 378 VEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCS 437

Query: 513 CAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKP 572
            A +G+G+ AL+ + +M A    P+ IT V +L ACSH+GL  +   YF  M + YGI P
Sbjct: 438 YASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVP 497

Query: 573 GPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNL 632
             +HY CM+DL GR+G L +AK  +++     +A VWK LLSACR+H  +E  + A+  L
Sbjct: 498 NTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHKHIEYAQLASEKL 557

Query: 633 FELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISE 692
            +LE  +A  YV +SNMY+T  KW D  ++R  MK R +RK+PG SW+   + VH F++ 
Sbjct: 558 VQLEQYDAGSYVLMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQSWIHLKNVVHRFVAL 617

Query: 693 DRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLL 752
           D  HP   +IY+ ++++M  +KE GY    +  +H++EEE +E  L +HSEKLA+AFG++
Sbjct: 618 DTSHPRSAEIYAYLEKLMERLKEMGYTSRTDLVVHDIEEEQRETSLKFHSEKLAIAFGII 677

Query: 753 TLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           + P G  +RIFKNLRVC DCH A+K+I+    R I++RD  RFHHFK G CSC D+W
Sbjct: 678 STPVGTALRIFKNLRVCEDCHEAIKFITRATDREIVVRDLYRFHHFKDGQCSCEDFW 734



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 208/435 (47%), Gaps = 33/435 (7%)

Query: 8   ILNFSLRCRSKI--IGPARYTHN--VGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKM 62
           +L   LRC + +  +   R  H   + + V P   L  A++D ++  G+   A + F  M
Sbjct: 128 VLAGVLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAM 187

Query: 63  SDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFW 122
           + +D  +WN +I A    G L  A +LF+E+  ++  +W++++ G   +G   EA     
Sbjct: 188 AQKDATSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQ 247

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           QM   G   S YT   V  L  L      G Q HG  +    + +AFV   L+DMY KC 
Sbjct: 248 QMVRAGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCG 307

Query: 183 CIFEAEYLFKMFPD--GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
            +  A  +F  + D       AW+TM+ GY QNG   +A+E FR M  EGV + QF   S
Sbjct: 308 EMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTS 367

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           + +ACA     + G QVHG +   G   +  + SA++DMY+K G L+ A R+   ++  N
Sbjct: 368 VASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKN 427

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
              W +M+  +A  G  + AL +F +M A  I  ++ T  +VL+  +           HS
Sbjct: 428 VALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACS-----------HS 476

Query: 361 LIVKTGF-------EGYKFVNNA-----LIDMYAKQGNLDCA--FMVFNLMQDKDVISWT 406
            +V  G+       E Y  V N      ++D+Y + G LD A  F+  N +  + V+ W 
Sbjct: 477 GLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVV-WK 535

Query: 407 SLITGCAYHGSYEEA 421
           +L++ C  H   E A
Sbjct: 536 TLLSACRLHKHIEYA 550


>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Brachypodium distachyon]
          Length = 796

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 251/660 (38%), Positives = 373/660 (56%), Gaps = 13/660 (1%)

Query: 155 FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
            H  A+ + F  + FV + L  +Y       +A  +F   P   + V W T++ G S   
Sbjct: 145 LHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPS-PDTVLWNTLLAGLS--- 200

Query: 215 YGFKAIECFRDMRVEG-VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
            G +A+E F  M   G V  +  T  S+L A A V+    G  VH      G   + +V 
Sbjct: 201 -GSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVV 259

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
           + LI +YAKCGD++ AR L +  E  + V++N++I G++  G    ++ LFK++    ++
Sbjct: 260 TGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLR 319

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
               T  +++   +       A  +H+ +VK G +    V+ AL  +Y +  ++D A   
Sbjct: 320 PSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRA 379

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           F+ M +K + SW ++I+G A +G  E A+  F  M+   + P+ + +SS LSACA+L  L
Sbjct: 380 FDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGAL 439

Query: 454 EFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC 513
             G+ VH +        ++ V  +L+ +Y KCG I +A  +FDSM  ++V++W  +I G 
Sbjct: 440 SLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGY 499

Query: 514 AQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPG 573
             +G+G EAL+ Y  M+     P   TF+ +L+ACSH GL +     F SM   YGI PG
Sbjct: 500 GLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPG 559

Query: 574 PDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV----WKALLSACRVHGDLELGERAA 629
            +H  CM+DLLGR+G+L EA  L+ +    P + V    W ALL AC VH D +L + A+
Sbjct: 560 IEHCTCMVDLLGRAGQLKEAFELISEF---PKSAVGPGIWGALLGACMVHKDGDLAKLAS 616

Query: 630 NNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIF 689
             LFELEP N   YV LSN+Y++  ++ +AA VR+  KSR + K PGC+ +E   + H+F
Sbjct: 617 QKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVF 676

Query: 690 ISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAF 749
           ++ DR HP    IY  ++++   + EAGY PD   AL++VEEE KE  +  HSEKLA+AF
Sbjct: 677 MAGDRAHPQSDAIYLYLEKLTAKMIEAGYRPDTEAALYDVEEEEKEHMVKVHSEKLAIAF 736

Query: 750 GLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           GLL    G  IRI KNLRVC DCH A K IS V  R I++RD++RFHHF+ G CSCGDYW
Sbjct: 737 GLLNTEPGTEIRIIKNLRVCLDCHNATKIISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 796



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 160/346 (46%), Gaps = 4/346 (1%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +I+ YA  G +  A+ LF+     +  T+++LI GYS  G+   + ELF ++   G RPS
Sbjct: 262 LISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPS 321

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
             TL  ++ + S  G        H + +K   D NA V T L  +Y +   +  A   F 
Sbjct: 322 SSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFD 381

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
             P+ K   +W  MI+GY+QNG    A+  F+ M+   V  N  T  S L+ACA + A  
Sbjct: 382 AMPE-KTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALS 440

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G  VH  I +   E NVYV +ALIDMY KCG +  AR + +  +  N VSWN MI G+ 
Sbjct: 441 LGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYG 500

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYK 371
             G   EAL L+K M    +     T+ SVL  C    +         S+    G     
Sbjct: 501 LHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGI 560

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS--WTSLITGCAYH 415
                ++D+  + G L  AF + +      V    W +L+  C  H
Sbjct: 561 EHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVH 606



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 126/271 (46%), Gaps = 7/271 (2%)

Query: 29  VGNSVKPASDLNRALVDF-SNSGEIDEAGQLFEKMS----DRDGFTWNTMIAAYANSGRL 83
           VG  ++P+S    AL+   S  G    AG L   +     D +      +   Y     +
Sbjct: 314 VGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDM 373

Query: 84  REAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLC 143
             A++ F+  P K   +W+++I GY+  GL   A  LF QMQ    RP+  T+ + L  C
Sbjct: 374 DSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSAC 433

Query: 144 SLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAW 203
           +  G L  G+  H        +LN +V+T L+DMY KC  I EA  +F    D KN V+W
Sbjct: 434 AQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSM-DNKNVVSW 492

Query: 204 TTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS 263
             MI+GY  +G G +A++ ++DM    +     TF S+L AC+       G  V   + S
Sbjct: 493 NVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTS 552

Query: 264 S-GFEANVYVQSALIDMYAKCGDLDSARRLL 293
             G    +   + ++D+  + G L  A  L+
Sbjct: 553 DYGITPGIEHCTCMVDLLGRAGQLKEAFELI 583



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 147/342 (42%), Gaps = 45/342 (13%)

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           + +H+L V +GF    FV +AL  +Y      + A  VF+ +   D + W +L+ G    
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGL--- 199

Query: 416 GSYEEALKYFSDMRISG-ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
            S  EAL+ F  M  +G + PD   ++S+L A AE+     G+ VHA   K G      V
Sbjct: 200 -SGSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHV 258

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
              L+ +YAKCG +  A  +FD M   D++T+ ALI G + NG    +++ + +++  G 
Sbjct: 259 VTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGL 318

Query: 535 KPDYITFVGL-----------LFACSH-----AGLAENARW---------YFESMD---K 566
           +P   T V L           L  C H     AGL  NA            F  MD   +
Sbjct: 319 RPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARR 378

Query: 567 VYGIKPGP--DHYACMIDLLGRSGKLIEAKALLDQMVG---EPDATVWKALLSACRVHGD 621
            +   P    + +  MI    ++G    A AL  QM      P+     + LSAC   G 
Sbjct: 379 AFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGA 438

Query: 622 LELGERA----ANNLFELEPMNAMPYVQLSNMYSTAGKWEDA 659
           L LG+      AN   EL   N      L +MY   G   +A
Sbjct: 439 LSLGKWVHKIIANEKLEL---NVYVMTALIDMYVKCGSIAEA 477


>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 865

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 240/659 (36%), Positives = 371/659 (56%), Gaps = 36/659 (5%)

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A  LF   P   +    +T+I+  + +G   +AI+ +  ++  G++ +   F +   AC
Sbjct: 116 RARQLFDNIPQ-PDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKAC 174

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A         +VH      G  ++V+V +ALI  Y KC  ++ ARR+ +   + + VSW 
Sbjct: 175 AVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWT 234

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           S+   + + GF ++ + +F++M    +K +  T  S+L   A   DL + K +H   V+ 
Sbjct: 235 SLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRH 294

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT--------------- 410
           G     FV +AL+ +YAK  ++  A MVF+LM  +DV+SW  ++T               
Sbjct: 295 GMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLF 354

Query: 411 --------------------GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
                               GC  +G  EEA++ F  M+  G  P+ + +SSIL AC+  
Sbjct: 355 LKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFS 414

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
             L  G+++H    +      L+   +L+ +YAKCG +N +  VFD M  +DV+ W  +I
Sbjct: 415 ENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMI 474

Query: 511 MGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGI 570
           +  A +G GKEAL  +D+ML    +P+ +TF G+L  CSH+ L E     F SM + + +
Sbjct: 475 IANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLV 534

Query: 571 KPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAAN 630
           +P  +HY+C++D+  R+G+L EA   +  M  EP A+ W ALL+ACRV+ ++EL + +A 
Sbjct: 535 EPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAK 594

Query: 631 NLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFI 690
            LFE+EP N   YV L N+  TA  W +A++VR LMK RGI K PGCSW++  ++VH F+
Sbjct: 595 KLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFV 654

Query: 691 SEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFG 750
             D+ +     IY+ +DE++  +K AGY PD ++ L ++++E K   L  HSEKLAVAFG
Sbjct: 655 VGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFG 714

Query: 751 LLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +L L   + IR+FKNLR+CGDCH A+KY+S V    I++RDS RFHHFK GNCSC D W
Sbjct: 715 ILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 773



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 231/482 (47%), Gaps = 46/482 (9%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +I    N G    A++LF+  P  +  T S+LI   + +GL  EA +++  +Q  G +P 
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 163

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
                   + C++ G   R ++ H  A +     + FV   L+  Y KCKC+  A  +F 
Sbjct: 164 MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 223

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
                ++ V+WT++ + Y + G+  K ++ FR+M   GV+ N  T  SIL ACA +    
Sbjct: 224 DLV-VRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLK 282

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR---LLEYSEI----------- 298
            G ++HG  +  G   N++V SAL+ +YAKC  +  AR    L+ + ++           
Sbjct: 283 SGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYF 342

Query: 299 ---------------------DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
                                 +E +WN++I G    G  +EA+ +F+KM     K ++ 
Sbjct: 343 KNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEI 402

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           T  S+L   + + +L   K +H  + +    G      AL+ MYAK G+L+ +  VF++M
Sbjct: 403 TISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMM 462

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
           + KDV++W ++I   A HG+ +EAL  F  M +S + P+ V  + +LS C+   ++E G 
Sbjct: 463 RRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGV 522

Query: 458 QVHAVFLKSGGCSSLSVDNS-----LVLVYAKCGCINDANRVFDSMHTRDVIT-WTALIM 511
           Q+      S G   L   ++     +V +Y++ G +N+A +    M      + W AL+ 
Sbjct: 523 QI----FNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLA 578

Query: 512 GC 513
            C
Sbjct: 579 AC 580



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 120/463 (25%), Positives = 214/463 (46%), Gaps = 60/463 (12%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N +I AY     +  A+++F++   ++  +W+SL   Y   G   +  ++F +M 
Sbjct: 198 DVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMG 257

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G +P+  T+ ++L  C+    L+ G++ HG+A++    +N FV + LV +YAKC  + 
Sbjct: 258 WSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVR 317

Query: 186 EAEYLFKMFP--------------------------------DG--KNHVAWTTMITGYS 211
           EA  +F + P                                DG   +   W  +I G  
Sbjct: 318 EARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCM 377

Query: 212 QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVY 271
           +NG   +A+E FR M+  G + N+ T  SIL AC+       G ++H  +       ++ 
Sbjct: 378 ENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLT 437

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD 331
             +AL+ MYAKCGDL+ +R + +     + V+WN+MI+  A  G  KEAL LF KM    
Sbjct: 438 STTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSR 497

Query: 332 IKIDDFTYPSVLN-CFASNIDLNNAKSVHSL----IVKTGFEGYKFVNNALIDMYAKQGN 386
           ++ +  T+  VL+ C  S +     +  +S+    +V+     Y  V    +D+Y++ G 
Sbjct: 498 VQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCV----VDIYSRAGR 553

Query: 387 LDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEALKYFSDMRISGICPDH-------- 437
           L+ A+     M  +   S W +L+  C  + + E  L   S  ++  I P++        
Sbjct: 554 LNEAYKFIQGMPMEPTASAWGALLAACRVYKNVE--LAKISAKKLFEIEPNNPGNYVSLF 611

Query: 438 --VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSL 478
             +V + + S  +++ +L   + +     K+ GCS L V N +
Sbjct: 612 NILVTAKMWSEASQVRILMKERGI----TKTPGCSWLQVGNKV 650



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 177/383 (46%), Gaps = 41/383 (10%)

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           LI +    GD + AR+L +     +  + +++I      G   EA+ ++  +  R IK D
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 163

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
              + +     A + D    K VH    + G     FV NALI  Y K   ++ A  VF+
Sbjct: 164 MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 223

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
            +  +DV+SWTSL +     G   + +  F +M  SG+ P+ + VSSIL ACAEL  L+ 
Sbjct: 224 DLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKS 283

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVI----------- 504
           G+++H   ++ G   +L V ++LV +YAKC  + +A  VFD M  RDV+           
Sbjct: 284 GKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFK 343

Query: 505 ------------------------TWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
                                   TW A+I GC +NG+ +EA++ + +M   G KP+ IT
Sbjct: 344 NKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEIT 403

Query: 541 FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD--HYACMIDLLGRSGKLIEAKALLD 598
              +L ACS    +EN R   E    V+      D      ++ +  + G L  ++ + D
Sbjct: 404 ISSILPACS---FSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFD 460

Query: 599 QMVGEPDATVWKALLSACRVHGD 621
            M+   D   W  ++ A  +HG+
Sbjct: 461 -MMRRKDVVAWNTMIIANAMHGN 482



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 132/265 (49%), Gaps = 11/265 (4%)

Query: 52  IDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF----NETPFKNFFTWSSLIYG 107
           + EA  +F+ M  RD  +WN ++ AY  +    +   LF     +    +  TW+++I G
Sbjct: 316 VREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGG 375

Query: 108 YSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLN 167
               G   EA E+F +MQ  G++P++ T+ ++L  CS    L+ G++ H Y  +     +
Sbjct: 376 CMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGD 435

Query: 168 AFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR 227
               T L+ MYAKC  +  +  +F M    K+ VAW TMI   + +G G +A+  F  M 
Sbjct: 436 LTSTTALLYMYAKCGDLNLSRNVFDMM-RRKDVVAWNTMIIANAMHGNGKEALFLFDKML 494

Query: 228 VEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF---EANVYVQSALIDMYAKCG 284
           +  V+ N  TF  +L+ C+     + G Q+   +        +AN Y  S ++D+Y++ G
Sbjct: 495 LSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHY--SCVVDIYSRAG 552

Query: 285 DLDSARRLLEYSEIDNEVS-WNSMI 308
            L+ A + ++   ++   S W +++
Sbjct: 553 RLNEAYKFIQGMPMEPTASAWGALL 577


>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
 gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
          Length = 716

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 250/681 (36%), Positives = 374/681 (54%), Gaps = 70/681 (10%)

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           K  ++    I  +S+  +    I  F  M  +G+  +    P+++  CAA+SA   G Q+
Sbjct: 37  KTGISLPETIQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQM 96

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSAR-------------------------RL 292
           H   L SG   +  V S+L+ MY +   L  AR                         R+
Sbjct: 97  HCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRV 156

Query: 293 LEYSEI----------DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
            E  E+           N VSWN MI GF R G + +A+ +F+ MH   +K D  +  SV
Sbjct: 157 KETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSV 216

Query: 343 LNCFASNIDLN-NAKSVHSLIVKTGFEGYKFVNNALIDMYAK------------------ 383
           L     ++D+      +H  ++K G    KFV +ALIDMY K                  
Sbjct: 217 LPAVG-DLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVD 275

Query: 384 -------------QGNLDCAFMVFNLMQ--DKDVISWTSLITGCAYHGSYEEALKYFSDM 428
                         G +D A  VF   +  D +V+SWTS+I  C+ +G   EAL+ F +M
Sbjct: 276 VGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREM 335

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
           +I G+ P+ V +  +L AC  +  L  G+  H   L++G  + + V ++L+ +YAKCG +
Sbjct: 336 QIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRM 395

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
             +   FD M  R++++W +L+ G A +GK  EA+  ++ M   G KPD+++F  +L AC
Sbjct: 396 LASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSAC 455

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           +  GL E   +YF+SM + +G++   +HY+CM+ LLGRSG+L EA A++ QM  EPD+ V
Sbjct: 456 TQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCV 515

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           W ALLS+CRVH  ++LGE AA  +FELEP N   Y+ LSN+Y++   W +   VR +M+S
Sbjct: 516 WGALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRS 575

Query: 669 RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHN 728
           RG++K PG SW+E  ++VH+ ++ D  HP    I  K+ ++ + +K++GYVP  +F L +
Sbjct: 576 RGLKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQD 635

Query: 729 VEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHII 788
           VEE+ KE  L  HSEKLAV  GLL    G P+++ KNLR+C DCH  +K+IS    R I 
Sbjct: 636 VEEQDKEQILCGHSEKLAVVLGLLNTKPGFPLQVIKNLRICRDCHAVIKFISDFEKREIF 695

Query: 789 LRDSNRFHHFKAGNCSCGDYW 809
           +RD+NRFH FK G CSCGDYW
Sbjct: 696 VRDTNRFHQFKGGVCSCGDYW 716



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 193/402 (48%), Gaps = 38/402 (9%)

Query: 52  IDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP----FKNFFTWSSLIYG 107
           + +A  +F+K+      T + +I+ +A  GR++E K+LF +T       N  +W+ +I G
Sbjct: 125 LKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISG 184

Query: 108 YSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLN 167
           ++  G  ++A  +F  M LEG +P   ++ +VL       +   G Q H Y IK     +
Sbjct: 185 FNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPD 244

Query: 168 AFVVTGLVDMYAKCKCIFE-------------------------------AEYLFKMFPD 196
            FVV+ L+DMY KC C  E                               A  +FK F  
Sbjct: 245 KFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKG 304

Query: 197 GK-NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGA 255
              N V+WT+MI   SQNG   +A+E FR+M++EGV+ N  T P +L AC  ++A   G 
Sbjct: 305 MDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGK 364

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
             H   L +G   +VYV SALIDMYAKCG + ++R   +     N VSWNS++ G+A  G
Sbjct: 365 AAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHG 424

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
              EA+++F+ M     K D  ++  VL+ C    +         S+    G E      
Sbjct: 425 KTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHY 484

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYH 415
           + ++ +  + G L+ A+ +   M  + D   W +L++ C  H
Sbjct: 485 SCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVH 526



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 211/466 (45%), Gaps = 69/466 (14%)

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
              +F  M  +G  P    L  V++ C+    LQ G+Q H +A+ +   L++ V++ L+ 
Sbjct: 58  VIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLH 117

Query: 177 MYAKCKCIFEAEYLFKMFPD----------------GK------------------NHVA 202
           MY +   + +A  +F   P                 G+                  N V+
Sbjct: 118 MYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVS 177

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
           W  MI+G++++G    A+  F++M +EG++ +  +  S+L A   +     G Q+H  ++
Sbjct: 178 WNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVI 237

Query: 263 SSGFEANVYVQSALIDMYAKC-------------------------------GDLDSARR 291
             G   + +V SALIDMY KC                               G +D+A  
Sbjct: 238 KQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALE 297

Query: 292 LL-EYSEID-NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
           +  ++  +D N VSW SMI   ++ G   EAL LF++M    +K +  T P +L    + 
Sbjct: 298 VFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNI 357

Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
             L + K+ H   ++ G     +V +ALIDMYAK G +  + + F++M +++++SW SL+
Sbjct: 358 AALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLM 417

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
            G A HG   EA+  F  M+  G  PDHV  + +LSAC +  + E G        ++ G 
Sbjct: 418 AGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGV 477

Query: 470 SS-LSVDNSLVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMGC 513
            + +   + +V +  + G + +A  +   M    D   W AL+  C
Sbjct: 478 EARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSC 523



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 106/436 (24%), Positives = 188/436 (43%), Gaps = 64/436 (14%)

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C   + +   +Q H  IL +G      +Q     +++K        R+  Y      V  
Sbjct: 19  CLCSATKASLSQAHAHILKTGISLPETIQ-----IFSKLNHFGHVIRVFSYMLTQGIVPD 73

Query: 305 NSMIVGFARQGFHKEALSLFKKMH----ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
           + ++    +      AL   K+MH       + +D     S+L+ +     L +A++V  
Sbjct: 74  SRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFD 133

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV----ISWTSLITGCAYHG 416
            + + G       ++ALI  +A++G +     +F   +D  V    +SW  +I+G    G
Sbjct: 134 KLPQPGV----VTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSG 189

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
           SY +A+  F +M + G+ PD   VSS+L A  +L +   G Q+H   +K G      V +
Sbjct: 190 SYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVS 249

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRD---------------------------------V 503
           +L+ +Y KC C ++ + VF+ M   D                                 V
Sbjct: 250 ALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNV 309

Query: 504 ITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH--AGLAENARWYF 561
           ++WT++I  C+QNGK  EAL+ + +M   G KP+ +T   LL AC +  A L   A   F
Sbjct: 310 VSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCF 369

Query: 562 ESMDKVYGIKPGPDHY--ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVH 619
              + ++      D Y  + +ID+  + G+++ ++   D M    +   W +L++   +H
Sbjct: 370 SLRNGIFN-----DVYVGSALIDMYAKCGRMLASRLCFDMMPNR-NLVSWNSLMAGYAMH 423

Query: 620 GDLELGERAANNLFEL 635
           G        A N+FEL
Sbjct: 424 GK----TFEAINIFEL 435


>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
 gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
          Length = 720

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 240/699 (34%), Positives = 382/699 (54%), Gaps = 38/699 (5%)

Query: 147 GLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTM 206
            LL RG    G +++            ++  + + +   +A  +F   P  +    WT  
Sbjct: 24  ALLLRGRAARGGSLEARLATVPHERASVLRFWVRRRRFHDARGVFDERPT-RTAPVWTLT 82

Query: 207 ITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
           I+G ++ G     +  F +M  EG    N F   +++  CA +   + G +VHG +L +G
Sbjct: 83  ISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNG 142

Query: 266 FEANVYVQSALIDMYAKCGDLDSARR-------------------------------LLE 294
              +V + +A++DMYAKCG  + ARR                               L +
Sbjct: 143 VHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIGACIQSGDILGSMQLFD 202

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
            S + +  SWN++I G  R G   +ALS  ++M    +  + +TY +        +  + 
Sbjct: 203 ESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDL 262

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN----LMQDKDVISWTSLIT 410
            + +H  ++    EG  FV ++L+DMY K G L+ A  VF+    L +D +  +W++++ 
Sbjct: 263 GRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMN-FAWSTMVA 321

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
           G   +G  EEAL  F  M   G+  D   ++S+ +ACA + ++E G+QVH    K     
Sbjct: 322 GYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKL 381

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
              + +++V +YAKCG + DA  +FD   T+++  WT+++   A +G+G+ A++ +++M 
Sbjct: 382 DAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMT 441

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKL 590
           A    P+ IT VG+L ACSH GL      YF+ M + YGI P  +HY C++DL GRSG L
Sbjct: 442 AEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLL 501

Query: 591 IEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMY 650
            +AK  +++     +A VWK LLSACR+H   E  + A+  L +LE  +A  YV LSN+Y
Sbjct: 502 DKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQCDAGSYVMLSNIY 561

Query: 651 STAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIM 710
           +T  KW D   +R  M+ R +RK+PG SW+   + VH F++ D  HP   +IY+ +++++
Sbjct: 562 ATNNKWHDTFELRVSMQERKVRKQPGRSWIHLKNTVHTFVAGDASHPQSAEIYAYLEKLV 621

Query: 711 LLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCG 770
             +KE GY    +  +H+VE+E +E  L +HSEKLA+AFG+++ P G P+RIFKNLRVC 
Sbjct: 622 ERLKEIGYTSRTDLVVHDVEDEQRETALKFHSEKLAIAFGIISTPSGTPLRIFKNLRVCE 681

Query: 771 DCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           DCH A+KYIS    R I++RD  RFHHFK  +CSC D+W
Sbjct: 682 DCHEAIKYISLATGREIVVRDLYRFHHFKDASCSCEDFW 720



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/393 (31%), Positives = 204/393 (51%), Gaps = 18/393 (4%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  L  ++  G+ + A ++F  M++RD  +WN  I A   SG +  + +LF+E+P ++  
Sbjct: 151 NAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTT 210

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           +W+++I G    G   +A     +M   G   + YT      L  +  L   G Q HG  
Sbjct: 211 SWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRV 270

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF-PDGKN-HVAWTTMITGYSQNGYGF 217
           +    + +AFV + L+DMY KC  +  A  +F  + P  ++ + AW+TM+ GY QNG   
Sbjct: 271 LIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREE 330

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           +A++ FR M  EGV +++FT  S+  ACA V   + G QVHGC+    ++ +  + SA++
Sbjct: 331 EALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIV 390

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
           DMYAKCG+L+ AR + + +   N   W SM+  +A  G  + A+ LF++M A  +  ++ 
Sbjct: 391 DMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEI 450

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN-----NALIDMYAKQGNLDCAFM 392
           T   VL+   S++ L    S   L  K   E Y  V      N ++D+Y + G LD A  
Sbjct: 451 TLVGVLSA-CSHVGL---VSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKA-- 504

Query: 393 VFNLMQDKDV----ISWTSLITGCAYHGSYEEA 421
             N +++ ++    I W +L++ C  H   E A
Sbjct: 505 -KNFIEENNINHEAIVWKTLLSACRLHQHNEYA 536



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 227/468 (48%), Gaps = 36/468 (7%)

Query: 82  RLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVL 140
           R  +A+ +F+E P +    W+  I G +  G   +    F +M  EG   P+ + L  V+
Sbjct: 60  RFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVV 119

Query: 141 RLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC------------------- 181
           R C+  G ++ G++ HG+ ++    L+  +   ++DMYAKC                   
Sbjct: 120 RCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAV 179

Query: 182 -------KCIFEAEYL--FKMFPDG--KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG 230
                   CI   + L   ++F +   ++  +W T+I+G  ++G+   A+   R M   G
Sbjct: 180 SWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAG 239

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           V  N +T+ +       +   D G Q+HG +L +  E + +V+S+L+DMY KCG L++A 
Sbjct: 240 VVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAA 299

Query: 291 RLLEYSEI---DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFA 347
            + ++      D   +W++M+ G+ + G  +EAL LF++M    +  D FT  SV    A
Sbjct: 300 SVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACA 359

Query: 348 SNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTS 407
           +   +   + VH  + K  ++    + +A++DMYAK GNL+ A  +F+    K++  WTS
Sbjct: 360 NVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTS 419

Query: 408 LITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG 467
           ++   A HG    A++ F  M    + P+ + +  +LSAC+ + ++  G+       +  
Sbjct: 420 MLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEY 479

Query: 468 G-CSSLSVDNSLVLVYAKCGCINDA-NRVFDSMHTRDVITWTALIMGC 513
           G   S+   N +V +Y + G ++ A N + ++    + I W  L+  C
Sbjct: 480 GIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSAC 527


>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 247/645 (38%), Positives = 376/645 (58%), Gaps = 41/645 (6%)

Query: 174 LVDMYAKCKCIFEAEYLFKMF-------PDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
           L+ +Y+K   +  A  LF              N     TM+  Y+  G  ++AI+ +  M
Sbjct: 64  LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYM 123

Query: 227 RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDL 286
           +  GV  N FT+P +L  CA+     FG  VHG ++ +GF ++++V++AL+DMYAKCG++
Sbjct: 124 QRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEI 183

Query: 287 DSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCF 346
             A  + +   I + V W +MI  + +     +AL LF+KM       D+ T        
Sbjct: 184 GDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEIT-------- 235

Query: 347 ASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWT 406
                   A SV S + + G +G   ++ A               +VF+ M++++ ISW 
Sbjct: 236 --------AISVASAVGQLG-DGRMAISRAR--------------LVFDRMEERNGISWN 272

Query: 407 SLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
           S+++G   +G   +AL  F+ M+ S   P+ V    ++SAC+ L     G+++H   + S
Sbjct: 273 SMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISS 332

Query: 467 GGCSSLSVDNSLVLVYAKCGCINDANRVFDS--MHTRDVITWTALIMGCAQNGKGKEALQ 524
                 ++ N+++ +Y KCG ++ A  +F++  +  RDV +W  LI G   +G GKEAL+
Sbjct: 333 KMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALE 392

Query: 525 FYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLL 584
            + +M   G +P+ ITF  +L ACSHAGL +  R  F  M K+  ++P   HYACM+D+L
Sbjct: 393 LFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKL-SVRPEMKHYACMVDML 451

Query: 585 GRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYV 644
           GR+G L EA  L+ ++   P   VW ALL ACR+HG+ ELGE AANNLF+LEP +   YV
Sbjct: 452 GRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYV 511

Query: 645 QLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYS 704
            +SN+Y+ + KW++   VR+ MKSRG++K    S +E  ++VH F + D+  P   ++Y 
Sbjct: 512 LMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYR 571

Query: 705 KIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFK 764
           K++ + + +K  GYVPD++  LH+VE E KE  L YHSEKLAVAFG++ + QG PI++ K
Sbjct: 572 KVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTK 631

Query: 765 NLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           NLRVC DCH A K+IS++Y R II+RD NRFHHF+ G CSCGDYW
Sbjct: 632 NLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 676



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 222/457 (48%), Gaps = 45/457 (9%)

Query: 73  MIAAYANSGRLREAKKLFNE--------TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           +I  Y+  G L  A+ LF+         T   N F  ++++  Y+N G   EA +L+  M
Sbjct: 64  LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYM 123

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
           Q  G   + +T   VL++C+ +     GE  HG  ++T F  + FV   LVDMYAKC  I
Sbjct: 124 QRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEI 183

Query: 185 FEAEYLF-KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
            +A  +F +M    ++ V WT MIT Y Q     KA+  FR M+ EG   ++ T  S+ +
Sbjct: 184 GDAHEVFDRMLI--RDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVAS 241

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           A                 L  G  A                 +  AR + +  E  N +S
Sbjct: 242 AVGQ--------------LGDGRMA-----------------ISRARLVFDRMEERNGIS 270

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WNSM+ G+ + G   +ALSLF +M A +   +  T   +++  +     +  + +H+ ++
Sbjct: 271 WNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVI 330

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN--LMQDKDVISWTSLITGCAYHGSYEEA 421
            +  +    + NA++DMY K G+LD A  +FN   + ++DV SW  LI+G   HG  +EA
Sbjct: 331 SSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEA 390

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           L+ FS M++ G+ P+ +  +SILSAC+   +++ G++  A   K      +     +V +
Sbjct: 391 LELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDM 450

Query: 482 YAKCGCINDANRVFDSMHTRDV-ITWTALIMGCAQNG 517
             + G +N+A R+   + +R     W AL++ C  +G
Sbjct: 451 LGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHG 487



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 143/312 (45%), Gaps = 44/312 (14%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGR------------------ 82
           ALVD ++  GEI +A ++F++M  RD   W  MI  Y  + R                  
Sbjct: 172 ALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLG 231

Query: 83  ---------------------LREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELF 121
                                +  A+ +F+    +N  +W+S++ GY+  G   +A  LF
Sbjct: 232 DEITAISVASAVGQLGDGRMAISRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLF 291

Query: 122 WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
            QMQ     P+  T   ++  CS  G    G + H + I +  D++  +   ++DMY KC
Sbjct: 292 NQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKC 351

Query: 182 KCIFEAEYLFKMFPDGKNHVA-WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
             +  A  +F     G+  V+ W  +I+GY  +G+G +A+E F  M+VEGVE N  TF S
Sbjct: 352 GDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTS 411

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY--SEI 298
           IL+AC+     D G +    +        +   + ++DM  + G L+ A RL++   S  
Sbjct: 412 ILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRP 471

Query: 299 DNEVSWNSMIVG 310
            +EV W ++++ 
Sbjct: 472 SDEV-WGALLLA 482


>gi|302773754|ref|XP_002970294.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
 gi|300161810|gb|EFJ28424.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
          Length = 1096

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 261/744 (35%), Positives = 412/744 (55%), Gaps = 32/744 (4%)

Query: 74   IAAYANSGRLREAKKLF-NETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
            ++ +A  G L  A+ +F N    +N  +W+ +I+ Y+  G    AF+L+ +M  E   P+
Sbjct: 371  VSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRMDCE---PN 427

Query: 133  QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
              T   V+  C     L R EQ H + + + F+ +  +   LV MY KC  +  A  +F+
Sbjct: 428  AVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFE 487

Query: 193  MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS-AR 251
               + ++ VAW +M++ ++ NG   ++++ +  M +EG + ++ T+ ++L AC +VS AR
Sbjct: 488  NLKE-RSVVAWNSMLSAFASNGCYERSLKLYERMLLEGTKPDKITYLAVLDACQSVSEAR 546

Query: 252  DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE-IDNEVSWNSMIVG 310
             + A           E ++  ++A +  YA+CG L  A+   +  +  +N V+WN+MI G
Sbjct: 547  RYAATFE-------LELDIAARNAAVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISG 599

Query: 311  FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
             A+ G  K+AL  F KM    ++ +  TY + L   +S  DL   + +H+ I+       
Sbjct: 600  LAQHGESKQALECFWKMELEGVRANSVTYLASLEACSSLKDLTRGRQLHARILLENIHEA 659

Query: 371  KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
               +NA+I+MY K G+LD A   F  M ++DVISW ++I   A HGS  +AL++F  M +
Sbjct: 660  NL-SNAVINMYGKCGSLDEAMDEFVKMPERDVISWNTMIATYAQHGSGRQALEFFKQMDL 718

Query: 431  SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC--SSLSVDNSLVLVYAKCGCI 488
             G  PD       + AC  +  L  G+ +H++   +  C      V  +LV +YA+CG +
Sbjct: 719  EGWTPDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSL 778

Query: 489  NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
            +DA  VF   H+R+++TW+ LI  CAQ+G+  EAL  + +M  +GTKPD +TF  L+ AC
Sbjct: 779  HDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQGTKPDALTFSTLVAAC 838

Query: 549  SHAGLAEN-ARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
            S  G+ ++  R  F+++ +VY +    +HY CM+++LGR+GKL EA+ L+  M  +    
Sbjct: 839  SRRGVVKDGGRRIFDALGRVYPVSASAEHYGCMVEVLGRAGKLEEAEGLIQGMPRKASGA 898

Query: 608  VWKALLSACRVHGDLELGERAANNLFELEPMN-AMPYVQLSNMYSTAGKWEDAARVRKLM 666
            +W ALL+AC   GDLE G RAAN   +L+P + A     L+ +Y  AG+WEDAARVRK +
Sbjct: 899  IWMALLAACNRRGDLERGIRAANRAQQLDPGSFAASMAMLAELYGAAGRWEDAARVRKAV 958

Query: 667  KSRGIRKEPGC-SWVETNSQVHIF-ISEDRGHPLRTD-IYSKIDEI-MLLIKEAGYVPDM 722
            +SR  R+EPG  SW+E N++VH F   +DR    R D I  ++  +  L ++E G   D 
Sbjct: 959  ESRNARREPGGRSWIEVNNRVHEFGEDDDRLQGPRLDKIRGELQRLSSLAVEEGGICKDE 1018

Query: 723  NFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAV 782
            N   H        I    HSEK+A+ FG+++ P G  IRI KNLR C DCH   K++S  
Sbjct: 1019 NARAH--------ILGCCHSEKVAIGFGIVSTPAGQLIRIVKNLRACHDCHAFAKFVSRR 1070

Query: 783  YLRHIILRDSNRFHHFKA-GNCSC 805
              R I +RD    H F   G+CSC
Sbjct: 1071 IQREISVRDPYGLHCFHTNGSCSC 1094



 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 179/606 (29%), Positives = 297/606 (49%), Gaps = 28/606 (4%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           +  N +I  YA  G L++A ++F   P  N F+W++LI  Y+  G   E    F +MQL+
Sbjct: 62  YLQNHLIFMYAKCGCLQDAVEVFELLPCPNVFSWTALITAYAKEGHLREVLGFFRKMQLD 121

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G +P  +    VL  CS  G L  G+  H   +    +    V   +V++Y KC  + EA
Sbjct: 122 GTKPDAFVFSTVLTACSSAGALNEGKAIHDCVVLAGMETQ-VVGNAIVNLYGKCGRVHEA 180

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACA 246
           + +F+  P+ +N V+W  +I   +QNG+   A++ F+ M ++G V  N  TF S++ AC+
Sbjct: 181 KAVFERLPE-RNLVSWNALIAANAQNGHCKDAMQVFQLMDLDGSVRPNDATFVSVVDACS 239

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS--- 303
            +     G   H  I+ +GF++ ++V ++L++MY KCG +D AR + E   + + +S   
Sbjct: 240 NLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDHARLVFEKMRLRDVLSVYS 299

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           W  +I  FA  G   EA  LF KM    +  +  T+ +VL    +   L   + + + + 
Sbjct: 300 WTVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLRACTT---LAQCEKIFARVK 356

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVF-NLMQDKDVISWTSLITGCAYHGSYEEAL 422
             G E    +  A +  +AK G+L  A  VF NL   ++V+SWT +I   A  G    A 
Sbjct: 357 HLGLELDTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIRAAF 416

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
             +  M      P+ V   +++ +C     L   +Q+HA  + SG  S + +   LV +Y
Sbjct: 417 DLYKRMDCE---PNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQVCLVTMY 473

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
            KCG ++ A  +F+++  R V+ W +++   A NG  + +L+ Y++ML  GTKPD IT++
Sbjct: 474 GKCGSVDSAWSIFENLKERSVVAWNSMLSAFASNGCYERSLKLYERMLLEGTKPDKITYL 533

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
            +L AC     A      FE    +         YA       R G L EAKA  D +  
Sbjct: 534 AVLDACQSVSEARRYAATFELELDIAARNAAVSAYA-------RCGSLKEAKAAFDAIQW 586

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLF---ELEPMNAMPYVQLSNMYSTAGKWEDA 659
           + +A  W A++S    HG+     + A   F   ELE + A     L+++ + +   +D 
Sbjct: 587 KNNAVTWNAMISGLAQHGE----SKQALECFWKMELEGVRANSVTYLASLEACS-SLKDL 641

Query: 660 ARVRKL 665
            R R+L
Sbjct: 642 TRGRQL 647



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 176/603 (29%), Positives = 292/603 (48%), Gaps = 55/603 (9%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDG---FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWS 102
           +   G +D A  +FEKM  RD    ++W  +IAA+A++G L                   
Sbjct: 273 YGKCGSVDHARLVFEKMRLRDVLSVYSWTVIIAAFAHNGHL------------------- 313

Query: 103 SLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT 162
                       +EAF LF++M LEG  P++ T   VLR C+    L + E+        
Sbjct: 314 ------------LEAFVLFYKMDLEGVLPNKVTFVTVLRACT---TLAQCEKIFARVKHL 358

Query: 163 CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIEC 222
             +L+  + T  V  +AK   +  A  +F+     +N V+WT MI  Y+Q G+   A + 
Sbjct: 359 GLELDTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDL 418

Query: 223 FRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK 282
           ++ M     E N  TF +++ +C          Q+H  +++SGFE++V +Q  L+ MY K
Sbjct: 419 YKRM---DCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGK 475

Query: 283 CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
           CG +DSA  + E  +  + V+WNSM+  FA  G ++ +L L+++M     K D  TY +V
Sbjct: 476 CGSVDSAWSIFENLKERSVVAWNSMLSAFASNGCYERSLKLYERMLLEGTKPDKITYLAV 535

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-D 401
           L+   S  +     +   L +           NA +  YA+ G+L  A   F+ +Q K +
Sbjct: 536 LDACQSVSEARRYAATFELELDIA------ARNAAVSAYARCGSLKEAKAAFDAIQWKNN 589

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
            ++W ++I+G A HG  ++AL+ F  M + G+  + V   + L AC+ L  L  G+Q+HA
Sbjct: 590 AVTWNAMISGLAQHGESKQALECFWKMELEGVRANSVTYLASLEACSSLKDLTRGRQLHA 649

Query: 462 VFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKE 521
             L        ++ N+++ +Y KCG +++A   F  M  RDVI+W  +I   AQ+G G++
Sbjct: 650 RILLE-NIHEANLSNAVINMYGKCGSLDEAMDEFVKMPERDVISWNTMIATYAQHGSGRQ 708

Query: 522 ALQFYDQMLARGTKPDYITFVGLLFAC-SHAGLAENARWYFESMDKVYGIKPGPDHYACM 580
           AL+F+ QM   G  PD  T++G + AC S   LA     +         ++  P     +
Sbjct: 709 ALEFFKQMDLEGWTPDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATAL 768

Query: 581 IDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLF-ELEPMN 639
           + +  R G L +AK++  +     +   W  L++AC  HG     E  A +LF E++   
Sbjct: 769 VTMYARCGSLHDAKSVFWRSHSR-NLVTWSNLIAACAQHGR----ENEALDLFREMQLQG 823

Query: 640 AMP 642
             P
Sbjct: 824 TKP 826



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 150/510 (29%), Positives = 275/510 (53%), Gaps = 21/510 (4%)

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
           E  +P++Y   ++L+ C+ +     G+  H + + +   +N ++   L+ MYAKC C+ +
Sbjct: 22  ESLQPARYA--SLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYAKCGCLQD 79

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A  +F++ P   N  +WT +IT Y++ G+  + +  FR M+++G + + F F ++LTAC+
Sbjct: 80  AVEVFELLP-CPNVFSWTALITAYAKEGHLREVLGFFRKMQLDGTKPDAFVFSTVLTACS 138

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
           +  A + G  +H C++ +G E  V V +A++++Y KCG +  A+ + E     N VSWN+
Sbjct: 139 SAGALNEGKAIHDCVVLAGMETQV-VGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNA 197

Query: 307 MIVGFARQGFHKEALSLFKKMHAR-DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +I   A+ G  K+A+ +F+ M     ++ +D T+ SV++  ++ +DL   KS H  I++T
Sbjct: 198 LIAANAQNGHCKDAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRT 257

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVI---SWTSLITGCAYHGSYEEAL 422
           GF+ Y FV N+L++MY K G++D A +VF  M+ +DV+   SWT +I   A++G   EA 
Sbjct: 258 GFDSYLFVGNSLVNMYGKCGSVDHARLVFEKMRLRDVLSVYSWTVIIAAFAHNGHLLEAF 317

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
             F  M + G+ P+ V   ++L AC   T L   +++ A     G     ++  + V  +
Sbjct: 318 VLFYKMDLEGVLPNKVTFVTVLRAC---TTLAQCEKIFARVKHLGLELDTTLGTAFVSTF 374

Query: 483 AKCGCINDANRVFDSM-HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           AK G +  A  VF+++  +R+V++WT +I   AQ G  + A   Y +M     +P+ +TF
Sbjct: 375 AKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRM---DCEPNAVTF 431

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
           + ++ +C        A      M    G +       C++ + G+ G +  A ++ + + 
Sbjct: 432 MAVMDSCLRPEDLPRAEQIHAHM-VASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENL- 489

Query: 602 GEPDATVWKALLSACRVHG----DLELGER 627
            E     W ++LSA   +G     L+L ER
Sbjct: 490 KERSVVAWNSMLSAFASNGCYERSLKLYER 519



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 155/550 (28%), Positives = 248/550 (45%), Gaps = 67/550 (12%)

Query: 25  YTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRL 83
           + H V +  +    L   LV  +   G +D A  +FE + +R    WN+M++A+A++G  
Sbjct: 451 HAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFASNGCY 510

Query: 84  REAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLC 143
             + KL+                                +M LEG +P + T   VL  C
Sbjct: 511 ERSLKLYE-------------------------------RMLLEGTKPDKITYLAVLDAC 539

Query: 144 SLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAW 203
                 Q   +   YA     +L+       V  YA+C  + EA+  F       N V W
Sbjct: 540 ------QSVSEARRYAATFELELDIAARNAAVSAYARCGSLKEAKAAFDAIQWKNNAVTW 593

Query: 204 TTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS 263
             MI+G +Q+G   +A+ECF  M +EGV +N  T+ + L AC+++     G Q+H  IL 
Sbjct: 594 NAMISGLAQHGESKQALECFWKMELEGVRANSVTYLASLEACSSLKDLTRGRQLHARILL 653

Query: 264 SGF-EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
               EAN  + +A+I+MY KCG LD A          + +SWN+MI  +A+ G  ++AL 
Sbjct: 654 ENIHEAN--LSNAVINMYGKCGSLDEAMDEFVKMPERDVISWNTMIATYAQHGSGRQALE 711

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG--FEGYKFVNNALIDM 380
            FK+M       D  TY   ++   S   L   K++HS++       E    V  AL+ M
Sbjct: 712 FFKQMDLEGWTPDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTM 771

Query: 381 YAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVV 440
           YA+ G+L  A  VF     +++++W++LI  CA HG   EAL  F +M++ G  PD +  
Sbjct: 772 YARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQGTKPDALTF 831

Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD----NSLVLVYAKCGCINDANRVFD 496
           S++++AC+   V++ G +   +F   G    +S        +V V  + G + +A  +  
Sbjct: 832 STLVAACSRRGVVKDGGR--RIFDALGRVYPVSASAEHYGCMVEVLGRAGKLEEAEGLIQ 889

Query: 497 SMHTR-DVITWTALIMGCAQNGKGKEALQFYD--QMLARGTKPDYITFVGLLFACSHAGL 553
            M  +     W AL+  C + G  +  ++  +  Q L  G+           FA S A L
Sbjct: 890 GMPRKASGAIWMALLAACNRRGDLERGIRAANRAQQLDPGS-----------FAASMAML 938

Query: 554 AE----NARW 559
           AE      RW
Sbjct: 939 AELYGAAGRW 948



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 144/474 (30%), Positives = 227/474 (47%), Gaps = 48/474 (10%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           + S+L  CA   +   G  VH  ILSSG   N Y+Q+ LI MYAKCG L  A  + E   
Sbjct: 29  YASLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYAKCGCLQDAVEVFELLP 88

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
             N  SW ++I  +A++G  +E L  F+KM     K D F + +VL   +S   LN  K+
Sbjct: 89  CPNVFSWTALITAYAKEGHLREVLGFFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKA 148

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           +H  +V  G E  + V NA++++Y K G +  A  VF  + +++++SW +LI   A +G 
Sbjct: 149 IHDCVVLAGME-TQVVGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGH 207

Query: 418 YEEALKYFSDMRISG-ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
            ++A++ F  M + G + P+     S++ AC+ L  L  G+  H   +++G  S L V N
Sbjct: 208 CKDAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGN 267

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVI---TWTALIMGCAQNGKGKEALQFYDQMLARG 533
           SLV +Y KCG ++ A  VF+ M  RDV+   +WT +I   A NG   EA   + +M   G
Sbjct: 268 SLVNMYGKCGSVDHARLVFEKMRLRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEG 327

Query: 534 TKPDYITFVGLLFACS-------------HAGLAEN-------------------ARWYF 561
             P+ +TFV +L AC+             H GL  +                   AR  F
Sbjct: 328 VLPNKVTFVTVLRACTTLAQCEKIFARVKHLGLELDTTLGTAFVSTFAKLGDLAAARDVF 387

Query: 562 ESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGD 621
           E++     +      +  MI    + G +  A  L  +M  EP+A  + A++ +C    D
Sbjct: 388 ENLGSSRNVVS----WTVMIWAYAQQGFIRAAFDLYKRMDCEPNAVTFMAVMDSCLRPED 443

Query: 622 LELGERAANNL----FELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
           L   E+   ++    FE    + +  V L  MY   G  + A  + + +K R +
Sbjct: 444 LPRAEQIHAHMVASGFE---SDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSV 494


>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
          Length = 1229

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 247/656 (37%), Positives = 363/656 (55%), Gaps = 39/656 (5%)

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGY 215
           H   I      N+ +   L+  YA  K +  A  +F   P+ +N +    MI  Y  NG+
Sbjct: 62  HSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPE-RNVIIINVMIRSYVNNGF 120

Query: 216 GFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSA 275
             + ++ F  M    V  + +TFP +L AC+       G ++HG     G  + ++V + 
Sbjct: 121 YGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNG 180

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           L+ MY KCG L  AR +L+     + VSWNS++VG+A+     +AL + ++M +  I  D
Sbjct: 181 LVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHD 240

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
             T  S+L        ++N  + + + VK              DM+ K G          
Sbjct: 241 AGTMASLLPA------VSNTTTENVMYVK--------------DMFFKMGK--------- 271

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
               K ++SW  +I     +    EA++ +S M   G  PD V ++S+L AC + + L  
Sbjct: 272 ----KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSL 327

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
           G+++H    +     +L ++N+L+ +YAKCGC+  A  VF++M +RDV++WTA+I     
Sbjct: 328 GKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGF 387

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
           +G+G +A+  + ++   G  PD I FV  L ACSHAGL E  R  F+ M   Y I P  +
Sbjct: 388 SGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLE 447

Query: 576 HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
           H ACM+DLLGR+GK+ EA   +  M  EP+  VW ALL ACRVH D ++G  AA+ LF+L
Sbjct: 448 HLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQL 507

Query: 636 EPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG 695
            P  +  YV LSN+Y+ AG+WE+   +R +MKS+G++K PG S VE N  +H F+  DR 
Sbjct: 508 APEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRS 567

Query: 696 HPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLP 755
           HP   +IY ++D ++  +KE GYVPD   ALH+VEEE KE  LA HSEKLA+ F L+   
Sbjct: 568 HPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTK 627

Query: 756 Q-----GAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCG 806
           +        IRI KNLR+CGDCH A K IS +  R II+RD+NRFH F+ G CSC 
Sbjct: 628 EEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCA 683



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 126/443 (28%), Positives = 202/443 (45%), Gaps = 36/443 (8%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           ++ AYA+   +  A+K+F+E P +N    + +I  Y N G   E  ++F  M     RP 
Sbjct: 80  LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
            YT   VL+ CS  G +  G + HG A K       FV  GLV MY KC  + EA  +  
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
                ++ V+W +++ GY+QN     A+E  R+M    +  +  T  S+L A +  +  +
Sbjct: 200 EM-SRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN 258

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
                            +YV+    DM+ K G     ++ L        VSWN MI  + 
Sbjct: 259 V----------------MYVK----DMFFKMG-----KKSL--------VSWNVMIGVYM 285

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
           +     EA+ L+ +M A   + D  +  SVL        L+  K +H  I +        
Sbjct: 286 KNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL 345

Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           + NALIDMYAK G L+ A  VF  M+ +DV+SWT++I+   + G   +A+  FS ++ SG
Sbjct: 346 LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSG 405

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCINDA 491
           + PD +   + L+AC+   +LE G+    +       +  L     +V +  + G + +A
Sbjct: 406 LVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEA 465

Query: 492 NRVFDSMHTR-DVITWTALIMGC 513
            R    M    +   W AL+  C
Sbjct: 466 YRFIQDMSMEPNERVWGALLGAC 488



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 159/342 (46%), Gaps = 16/342 (4%)

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
           F    VL+ +    D+   ++VHS I+         +   L+  YA   ++  A  VF+ 
Sbjct: 43  FLLGQVLDTYP---DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDE 99

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
           + +++VI    +I     +G Y E +K F  M    + PDH     +L AC+    +  G
Sbjct: 100 IPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIG 159

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
           +++H    K G  S+L V N LV +Y KCG +++A  V D M  RDV++W +L++G AQN
Sbjct: 160 RKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQN 219

Query: 517 GKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH 576
            +  +AL+   +M +     D  T   LL A S+    EN   Y + M    G K     
Sbjct: 220 QRFDDALEVCREMESVKISHDAGTMASLLPAVSNT-TTENV-MYVKDMFFKMG-KKSLVS 276

Query: 577 YACMIDLLGRSGKLIEAKALLDQMVG---EPDATVWKALLSACRVHGDLELGERAANNLF 633
           +  MI +  ++   +EA  L  +M     EPDA    ++L AC     L LG++      
Sbjct: 277 WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGY-- 334

Query: 634 ELEPMNAMPYVQLSN----MYSTAGKWEDAARVRKLMKSRGI 671
            +E    +P + L N    MY+  G  E A  V + MKSR +
Sbjct: 335 -IERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDV 375



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 167/376 (44%), Gaps = 14/376 (3%)

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           VH  I+      N  +   L+  YA   D+ SAR++ +     N +  N MI  +   GF
Sbjct: 61  VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
           + E + +F  M   +++ D +T+P VL   + +  +   + +H    K G     FV N 
Sbjct: 121 YGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNG 180

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           L+ MY K G L  A +V + M  +DV+SW SL+ G A +  +++AL+   +M    I  D
Sbjct: 181 LVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHD 240

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFD 496
              ++S+L A +  T  E    V  +F K G  S +S  N ++ VY K     +A  ++ 
Sbjct: 241 AGTMASLLPAVSN-TTTENVMYVKDMFFKMGKKSLVSW-NVMIGVYMKNAMPVEAVELYS 298

Query: 497 SMHT----RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
            M       D ++ T+++  C          + +  +  +   P+ +    L+   +  G
Sbjct: 299 RMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCG 358

Query: 553 LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE---PDATVW 609
             E AR  FE+M     +      +  MI   G SG+  +A AL  ++      PD+  +
Sbjct: 359 CLEKARDVFENMKSRDVVS-----WTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAF 413

Query: 610 KALLSACRVHGDLELG 625
              L+AC   G LE G
Sbjct: 414 VTTLAACSHAGLLEEG 429



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 115/256 (44%), Gaps = 40/256 (15%)

Query: 58  LFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEA 117
           +F KM  +   +WN MI  Y                  KN               + +EA
Sbjct: 265 MFFKMGKKSLVSWNVMIGVY-----------------MKN--------------AMPVEA 293

Query: 118 FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
            EL+ +M+ +G+ P   ++ +VL  C     L  G++ HGY  +     N  +   L+DM
Sbjct: 294 VELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDM 353

Query: 178 YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
           YAKC C+ +A  +F+     ++ V+WT MI+ Y  +G G  A+  F  ++  G+  +   
Sbjct: 354 YAKCGCLEKARDVFENMK-SRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIA 412

Query: 238 FPSILTACAAVSARDFGAQVHGC--ILSSGFEANVYVQ--SALIDMYAKCGDLDSARRLL 293
           F + L AC+     + G     C  +++  ++    ++  + ++D+  + G +  A R +
Sbjct: 413 FVTTLAACSHAGLLEEG---RSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFI 469

Query: 294 EYSEID-NEVSWNSMI 308
           +   ++ NE  W +++
Sbjct: 470 QDMSMEPNERVWGALL 485



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 88/216 (40%), Gaps = 39/216 (18%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI--YGYSNYGLDIEAFELFWQMQLEG 128
           N +I  YA  G L +A+ +F     ++  +W+++I  YG+S  G D  A  LF ++Q  G
Sbjct: 348 NALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCD--AVALFSKLQDSG 405

Query: 129 YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
             P        L  CS  GLL+ G        ++CF L       + D Y          
Sbjct: 406 LVPDSIAFVTTLAACSHAGLLEEG--------RSCFKL-------MTDHY---------- 440

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
              K+ P  ++      ++      G   K  E +R ++   +E N+  + ++L AC   
Sbjct: 441 ---KITPRLEHLACMVDLL------GRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVH 491

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
           S  D G      +     E + Y    L ++YAK G
Sbjct: 492 SDTDIGLLAADKLFQLAPEQSGYY-VLLSNIYAKAG 526


>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
          Length = 665

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 244/643 (37%), Positives = 359/643 (55%), Gaps = 40/643 (6%)

Query: 174 LVDMYAKCKCIFEAEYLFKMF-PDGKNH---VAWTTMITGYSQNGYGFKAIECFRDMRVE 229
           L+  YA C  +  A  + +   PDG++    V +  +I   + +     A+  F  MR  
Sbjct: 56  LIQAYAACSALPLAHTVLESSSPDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPR 115

Query: 230 GVE--SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLD 287
           G     + +T+P  L +C+A      G Q+H  +     + NVYV  + I MY++CG  +
Sbjct: 116 GPACFPDHYTYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPE 175

Query: 288 SARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF-TYPSVLNCF 346
            A R+ +     + VSWN+MI GFAR G    A+ +FK+       + D  T   +L   
Sbjct: 176 DAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPA- 234

Query: 347 ASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWT 406
                + NAK           +  +FV                   VF+ MQ K++ISW 
Sbjct: 235 -----MGNAKP----------DDIRFVRR-----------------VFDNMQFKELISWN 262

Query: 407 SLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
           +++   A +  + +A++ F  M    + PD + ++++L  C EL+    G+++H +  + 
Sbjct: 263 AMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRK 322

Query: 467 GGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFY 526
             C +L ++N+L+ +YA CGC+ DA  +FD M  RDVI+WT++I    ++G G+EA+  +
Sbjct: 323 NMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLF 382

Query: 527 DQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGR 586
           ++ML +G +PD I FV +L ACSHAGL  + + YF+SM   Y I P  +HY CM+DLLGR
Sbjct: 383 EKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGR 442

Query: 587 SGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQL 646
           +G + EA   +  M+ EP+  VW ALL ACR+H ++++G  AA+NLF L P     YV L
Sbjct: 443 AGCINEAYDFITTMLIEPNERVWGALLQACRIHSNMDIGLVAADNLFSLVPEQTGYYVLL 502

Query: 647 SNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKI 706
           SNMY+ AG+W D   VR +M ++GI+K PG S VE   QVH F   DR HP    IY K+
Sbjct: 503 SNMYARAGRWADVTSVRSVMVNKGIKKFPGTSIVELGDQVHTFHIGDRCHPQSEMIYHKL 562

Query: 707 DEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNL 766
           DE++  I+  GY P++   LH+VEEE KE  L+ HSEKLA+AF LL    G  IR+  NL
Sbjct: 563 DELLGKIRGMGYNPEVEATLHDVEEEDKEDHLSVHSEKLAIAFLLLNTSPGTIIRVTMNL 622

Query: 767 RVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           R C DCH A K IS +  R I+L+D+NR HH   G CSCGDYW
Sbjct: 623 RTCSDCHLAAKLISIITCREIVLKDTNRIHHIVQGVCSCGDYW 665



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/428 (23%), Positives = 189/428 (44%), Gaps = 59/428 (13%)

Query: 5   DFKILNFSLRCRSKIIGPARYTHNVG-NSVKPASDLNRALVDFSNSGEIDEAGQLFEKMS 63
           D  +L  S+R R     P  YT+ +   S   + DL   L   S   ++           
Sbjct: 104 DALVLFASMRPRGPACFPDHYTYPLALKSCSASKDLLLGLQIHSAVAKLR---------L 154

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           DR+ +  ++ I+ Y+  GR  +A ++F+  P ++  +W+++I G++  GL   A E+F Q
Sbjct: 155 DRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQ 214

Query: 124 -MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
            + L+G  P   T+  +L   ++        +F    ++  FD   F             
Sbjct: 215 FVVLQGSMPDAGTMAGILP--AMGNAKPDDIRF----VRRVFDNMQF------------- 255

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
                          K  ++W  M+  Y+ N +  KA+E F  M  + VE +  T  ++L
Sbjct: 256 ---------------KELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVL 300

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
             C  +SA   G ++H  I       N+ +++AL+DMYA CG L  AR + +     + +
Sbjct: 301 PPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVI 360

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK------ 356
           SW S+I  + + G  +EA+ LF+KM  + ++ D   + +VL   +    L + K      
Sbjct: 361 SWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSM 420

Query: 357 -SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAY 414
            S + +I K   E Y      ++D+  + G ++ A+  +  ++ + +   W +L+  C  
Sbjct: 421 TSRYHIIPKA--EHY----TCMVDLLGRAGCINEAYDFITTMLIEPNERVWGALLQACRI 474

Query: 415 HGSYEEAL 422
           H + +  L
Sbjct: 475 HSNMDIGL 482


>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 226/541 (41%), Positives = 340/541 (62%), Gaps = 2/541 (0%)

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
           ++ + L++MY+K    +SA+ LL  +   + V+W ++I G  + G    AL  F  M   
Sbjct: 43  FIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRD 102

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
            I+ +DFT+P       S       K VH+L VK G     FV  +  DMY+K G  + A
Sbjct: 103 SIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEA 162

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
             +F+ M ++++ +W + ++     G Y++AL  F + R  GI P   +VSS+LSACA L
Sbjct: 163 RKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGL 222

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
           +VLE G+ VH + +K+    ++ V ++LV +Y KCG I DA R FD M  R+++TW A+I
Sbjct: 223 SVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMI 282

Query: 511 MGCAQNGKGKEALQFYDQML--ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
            G A  G+   A+  +D+M   +    P+Y+TFV +L ACS AG        FESM   Y
Sbjct: 283 GGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRY 342

Query: 569 GIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
           GI+PG +HYAC++DLLGR+G + +A   + +M   P  +VW ALL A ++ G  ELG+ A
Sbjct: 343 GIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVA 402

Query: 629 ANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHI 688
           A+NLFEL+P+++  +V LSNM++ AG+WE+A  VRK MK  GI+K  GCSW+   + VH+
Sbjct: 403 ADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHV 462

Query: 689 FISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVA 748
           F ++D  H   ++I + + ++   ++ AGY+PD +FAL ++EEE K + + YHSEK+A+A
Sbjct: 463 FQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALA 522

Query: 749 FGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDY 808
           FGL+++P G PIRI KNLR+CGDCH+A+K+IS +  R II+RD+N FH F+   CSC DY
Sbjct: 523 FGLISIPAGVPIRITKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDY 582

Query: 809 W 809
           W
Sbjct: 583 W 583



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 186/374 (49%), Gaps = 6/374 (1%)

Query: 152 GEQFHGYAIKTCFD-LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
           G   H   IKT  + L +F+   LV+MY+K      A+ L  + P+ ++ V WT +I G 
Sbjct: 25  GRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPN-RSVVTWTALIAGS 83

Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV 270
            QNG    A+  F +MR + ++ N FTFP    A  ++ +   G QVH   + +G  ++V
Sbjct: 84  VQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDV 143

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
           +V  +  DMY+K G  + AR++ +     N  +WN+ +     +G + +AL+ F +    
Sbjct: 144 FVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEARKE 203

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
            I+  DF   SVL+  A    L   KSVH+L VK    G  FV +AL+DMY K G+++ A
Sbjct: 204 GIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDA 263

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG--ICPDHVVVSSILSACA 448
              F+ M ++++++W ++I G A+ G  + A+  F +M      + P++V    +LSAC+
Sbjct: 264 ERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACS 323

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL-VYAKCGCINDANRVFDSMHTRDVIT-W 506
               +  G ++        G    +   + V+ +  + G +  A +    M  R  ++ W
Sbjct: 324 RAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVW 383

Query: 507 TALIMGCAQNGKGK 520
            AL+      GK +
Sbjct: 384 GALLGASKMFGKSE 397



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 126/259 (48%), Gaps = 11/259 (4%)

Query: 54  EAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGL 113
           +AGQ+       D F   +    Y+ +G   EA+K+F+E P +N  TW++ +      G 
Sbjct: 136 KAGQI------SDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGR 189

Query: 114 DIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG 173
             +A   F + + EG  P+ + + +VL  C+   +L+ G+  H  A+K C   N FV + 
Sbjct: 190 YDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSA 249

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG--V 231
           LVDMY KC  I +AE  F   P+ +N V W  MI GY+  G    A+  F +M      V
Sbjct: 250 LVDMYGKCGSIEDAERAFDEMPE-RNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRV 308

Query: 232 ESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSAR 290
             N  TF  +L+AC+   + + G ++   +    G E      + ++D+  + G ++ A 
Sbjct: 309 APNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAY 368

Query: 291 RLLEYSEIDNEVS-WNSMI 308
           + ++   I   VS W +++
Sbjct: 369 QFIKKMPIRPTVSVWGALL 387



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 15/205 (7%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP--- 94
           +  ALVD +   G I++A + F++M +R+  TWN MI  YA+ G+   A  LF+E     
Sbjct: 246 VGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGS 305

Query: 95  ---FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQ 150
                N+ T+  ++   S  G      E+F  M+   G  P       V+ L    G+++
Sbjct: 306 HRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVE 365

Query: 151 RGEQF-HGYAIKTCFDLNAFVVTGLVDMYAKCKC-IFEAEYLFKMFP-DGKNHVAWTTMI 207
           +  QF     I+    +   ++ G   M+ K +     A+ LF++ P D  NHV  + M 
Sbjct: 366 QAYQFIKKMPIRPTVSVWGALL-GASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNM- 423

Query: 208 TGYSQNGYGFKAIECFRDMRVEGVE 232
             ++  G   +A    ++M+  G++
Sbjct: 424 --FAAAGRWEEATLVRKEMKDVGIK 446


>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 687

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 240/659 (36%), Positives = 371/659 (56%), Gaps = 36/659 (5%)

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A  LF   P   +    +T+I+  + +G   +AI+ +  ++  G++ +   F +   AC
Sbjct: 30  RARQLFDNIPQ-PDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKAC 88

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A         +VH      G  ++V+V +ALI  Y KC  ++ ARR+ +   + + VSW 
Sbjct: 89  AVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWT 148

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           S+   + + GF ++ + +F++M    +K +  T  S+L   A   DL + K +H   V+ 
Sbjct: 149 SLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRH 208

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT--------------- 410
           G     FV +AL+ +YAK  ++  A MVF+LM  +DV+SW  ++T               
Sbjct: 209 GMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLF 268

Query: 411 --------------------GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
                               GC  +G  EEA++ F  M+  G  P+ + +SSIL AC+  
Sbjct: 269 LKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFS 328

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
             L  G+++H    +      L+   +L+ +YAKCG +N +  VFD M  +DV+ W  +I
Sbjct: 329 ENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMI 388

Query: 511 MGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGI 570
           +  A +G GKEAL  +D+ML    +P+ +TF G+L  CSH+ L E     F SM + + +
Sbjct: 389 IANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLV 448

Query: 571 KPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAAN 630
           +P  +HY+C++D+  R+G+L EA   +  M  EP A+ W ALL+ACRV+ ++EL + +A 
Sbjct: 449 EPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAK 508

Query: 631 NLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFI 690
            LFE+EP N   YV L N+  TA  W +A++VR LMK RGI K PGCSW++  ++VH F+
Sbjct: 509 KLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFV 568

Query: 691 SEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFG 750
             D+ +     IY+ +DE++  +K AGY PD ++ L ++++E K   L  HSEKLAVAFG
Sbjct: 569 VGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFG 628

Query: 751 LLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +L L   + IR+FKNLR+CGDCH A+KY+S V    I++RDS RFHHFK GNCSC D W
Sbjct: 629 ILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 687



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 231/481 (48%), Gaps = 44/481 (9%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +I    N G    A++LF+  P  +  T S+LI   + +GL  EA +++  +Q  G +P 
Sbjct: 18  LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 77

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
                   + C++ G   R ++ H  A +     + FV   L+  Y KCKC+  A  +F 
Sbjct: 78  MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 137

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
                ++ V+WT++ + Y + G+  K ++ FR+M   GV+ N  T  SIL ACA +    
Sbjct: 138 DLV-VRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLK 196

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR---LLEYSEI----------- 298
            G ++HG  +  G   N++V SAL+ +YAKC  +  AR    L+ + ++           
Sbjct: 197 SGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYF 256

Query: 299 ---------------------DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
                                 +E +WN++I G    G  +EA+ +F+KM     K ++ 
Sbjct: 257 KNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEI 316

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           T  S+L   + + +L   K +H  + +    G      AL+ MYAK G+L+ +  VF++M
Sbjct: 317 TISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMM 376

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
           + KDV++W ++I   A HG+ +EAL  F  M +S + P+ V  + +LS C+   ++E G 
Sbjct: 377 RRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGV 436

Query: 458 QVHAVFLKSGGCSSLSVD----NSLVLVYAKCGCINDANRVFDSMHTRDVIT-WTALIMG 512
           Q   +F   G    +  D    + +V +Y++ G +N+A +    M      + W AL+  
Sbjct: 437 Q---IFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAA 493

Query: 513 C 513
           C
Sbjct: 494 C 494



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/459 (25%), Positives = 212/459 (46%), Gaps = 52/459 (11%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N +I AY     +  A+++F++   ++  +W+SL   Y   G   +  ++F +M 
Sbjct: 112 DVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMG 171

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G +P+  T+ ++L  C+    L+ G++ HG+A++    +N FV + LV +YAKC  + 
Sbjct: 172 WSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVR 231

Query: 186 EAEYLFKMFP--------------------------------DG--KNHVAWTTMITGYS 211
           EA  +F + P                                DG   +   W  +I G  
Sbjct: 232 EARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCM 291

Query: 212 QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVY 271
           +NG   +A+E FR M+  G + N+ T  SIL AC+       G ++H  +       ++ 
Sbjct: 292 ENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLT 351

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD 331
             +AL+ MYAKCGDL+ +R + +     + V+WN+MI+  A  G  KEAL LF KM    
Sbjct: 352 STTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSR 411

Query: 332 IKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
           ++ +  T+  VL+ C  S +     +  +S+      E      + ++D+Y++ G L+ A
Sbjct: 412 VQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEA 471

Query: 391 FMVFNLMQDKDVIS-WTSLITGCAYHGSYEEALKYFSDMRISGICPDH----------VV 439
           +     M  +   S W +L+  C  + + E  L   S  ++  I P++          +V
Sbjct: 472 YKFIQGMPMEPTASAWGALLAACRVYKNVE--LAKISAKKLFEIEPNNPGNYVSLFNILV 529

Query: 440 VSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSL 478
            + + S  +++ +L   + +     K+ GCS L V N +
Sbjct: 530 TAKMWSEASQVRILMKERGI----TKTPGCSWLQVGNKV 564



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 177/383 (46%), Gaps = 41/383 (10%)

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           LI +    GD + AR+L +     +  + +++I      G   EA+ ++  +  R IK D
Sbjct: 18  LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 77

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
              + +     A + D    K VH    + G     FV NALI  Y K   ++ A  VF+
Sbjct: 78  MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFD 137

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
            +  +DV+SWTSL +     G   + +  F +M  SG+ P+ + VSSIL ACAEL  L+ 
Sbjct: 138 DLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKS 197

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVI----------- 504
           G+++H   ++ G   +L V ++LV +YAKC  + +A  VFD M  RDV+           
Sbjct: 198 GKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFK 257

Query: 505 ------------------------TWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
                                   TW A+I GC +NG+ +EA++ + +M   G KP+ IT
Sbjct: 258 NKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEIT 317

Query: 541 FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD--HYACMIDLLGRSGKLIEAKALLD 598
              +L ACS    +EN R   E    V+      D      ++ +  + G L  ++ + D
Sbjct: 318 ISSILPACS---FSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFD 374

Query: 599 QMVGEPDATVWKALLSACRVHGD 621
            M+   D   W  ++ A  +HG+
Sbjct: 375 -MMRRKDVVAWNTMIIANAMHGN 396



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 132/265 (49%), Gaps = 11/265 (4%)

Query: 52  IDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF----NETPFKNFFTWSSLIYG 107
           + EA  +F+ M  RD  +WN ++ AY  +    +   LF     +    +  TW+++I G
Sbjct: 230 VREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGG 289

Query: 108 YSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLN 167
               G   EA E+F +MQ  G++P++ T+ ++L  CS    L+ G++ H Y  +     +
Sbjct: 290 CMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGD 349

Query: 168 AFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR 227
               T L+ MYAKC  +  +  +F M    K+ VAW TMI   + +G G +A+  F  M 
Sbjct: 350 LTSTTALLYMYAKCGDLNLSRNVFDMM-RRKDVVAWNTMIIANAMHGNGKEALFLFDKML 408

Query: 228 VEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF---EANVYVQSALIDMYAKCG 284
           +  V+ N  TF  +L+ C+     + G Q+   +        +AN Y  S ++D+Y++ G
Sbjct: 409 LSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHY--SCVVDIYSRAG 466

Query: 285 DLDSARRLLEYSEIDNEVS-WNSMI 308
            L+ A + ++   ++   S W +++
Sbjct: 467 RLNEAYKFIQGMPMEPTASAWGALL 491


>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 240/560 (42%), Positives = 333/560 (59%), Gaps = 39/560 (6%)

Query: 284 GDLDSARRLLEYSEIDNEVSW--NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPS 341
           G L  AR  L +++I N  ++  NS+I G+  +   ++A+  ++ M  + +  D FT+PS
Sbjct: 26  GSLPYAR--LVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPS 83

Query: 342 VLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
           +   F S   L   K +H    K GF    ++ N L++MY+  G L  A  VF+ M +K 
Sbjct: 84  L---FKSCGVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKS 140

Query: 402 VISWTSLI--------------------------------TGCAYHGSYEEALKYFSDMR 429
           V+SW ++I                                 G      YEEAL  F++M+
Sbjct: 141 VVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQ 200

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
           +SG+  D V ++S+L AC  L  LE G+ +H    K      +++  +LV +YAKCG I 
Sbjct: 201 LSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIE 260

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
            A RVF  M  +DV+TWTALI+G A  G+G +AL+ + +M     KPD ITFVG+L ACS
Sbjct: 261 SAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACS 320

Query: 550 HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
           HAGL      YF SM   YGI+P  +HY CM+D+LGR+G++ EA+ L+  M   PD  V 
Sbjct: 321 HAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVL 380

Query: 610 KALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
             LLSACR+HG+L + ERAA  L EL+P N   YV LSN+YS+   WE A ++R+LM  R
Sbjct: 381 VGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVER 440

Query: 670 GIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNV 729
            I+K PGCS +E    VH F+  D  HP  ++IY  +D++M  +K AGYVPD +  L ++
Sbjct: 441 NIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDM 500

Query: 730 EEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIIL 789
           +E+ KE  L+ HSEKLA+AFGLL+   G PIR+ KNLRVC DCH+AMK+IS VY R II+
Sbjct: 501 DEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIV 560

Query: 790 RDSNRFHHFKAGNCSCGDYW 809
           RD NRFHHF  G+CSC D+W
Sbjct: 561 RDRNRFHHFTKGSCSCRDFW 580



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 189/388 (48%), Gaps = 40/388 (10%)

Query: 66  DGFTWNTMIA--AYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D F+ + ++A  A  +SG L  A+ +FN+ P    FT +S+I GY+N  L  +A   +  
Sbjct: 9   DPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQL 68

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M L+G  P ++T  ++ + C   G+L  G+Q H ++ K  F  +A++   L++MY+ C C
Sbjct: 69  MMLQGLDPDRFTFPSLFKSC---GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGC 125

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR------------------- 224
           +  A  +F    + K+ V+W TMI  Y+Q     +AI+ FR                   
Sbjct: 126 LVSARKVFDKMVN-KSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHV 184

Query: 225 -------------DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVY 271
                        +M++ GV+ ++ T  S+L AC  + A + G  +H  I     E +V 
Sbjct: 185 EDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVA 244

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD 331
           + +AL+DMYAKCG ++SA R+ +     + ++W ++IVG A  G   +AL LF +M   +
Sbjct: 245 LGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSE 304

Query: 332 IKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL-DC 389
           +K D  T+  VL  C  + +        +S+  K G +        ++DM  + G + + 
Sbjct: 305 VKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEA 364

Query: 390 AFMVFNLMQDKDVISWTSLITGCAYHGS 417
             ++ N+    D      L++ C  HG+
Sbjct: 365 EDLIQNMPMAPDYFVLVGLLSACRIHGN 392



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 130/251 (51%), Gaps = 3/251 (1%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF-KNFFTWSSL 104
           +SN G +  A ++F+KM ++   +W TMI AYA      EA KLF       N F W+ +
Sbjct: 120 YSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIM 179

Query: 105 IYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCF 164
           I G+       EA  LF +MQL G +  + T+ ++L  C+  G L+ G+  H Y  K   
Sbjct: 180 INGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKI 239

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
           +++  + T LVDMYAKC  I  A  +F+  P+ K+ + WT +I G +  G G KA+E F 
Sbjct: 240 EVDVALGTALVDMYAKCGSIESAMRVFQEMPE-KDVMTWTALIVGLAMCGQGLKALELFH 298

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKC 283
           +M++  V+ +  TF  +L AC+     + G      + +  G + ++     ++DM  + 
Sbjct: 299 EMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRA 358

Query: 284 GDLDSARRLLE 294
           G +  A  L++
Sbjct: 359 GRIAEAEDLIQ 369


>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 840

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 233/599 (38%), Positives = 358/599 (59%), Gaps = 31/599 (5%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           + +IL  C    A   G +VH  ++ + +  +V++++ LI +Y KC  L  A  + +   
Sbjct: 246 YNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMP 305

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKI----------------------- 334
             N VSW +MI  ++++G+  +AL+LF      D+KI                       
Sbjct: 306 ERNVVSWTAMISAYSQRGYASQALNLF----FADVKISLTGVYAIDKLKLSNPNRPWVCT 361

Query: 335 --DDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM 392
             ++FT+ +VL    S++     + +HSLI+K  +E + FV ++L+DMYAK G +  A  
Sbjct: 362 EPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEART 421

Query: 393 VFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV 452
           VF  + ++DV+S T++I+G A  G  EEAL+ F  ++  G+  ++V  + +L+A + L  
Sbjct: 422 VFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAA 481

Query: 453 LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMG 512
           L+ G+QVH   L+S   S + + NSL+ +Y+KCG +  + R+FD+M+ R VI+W A+++G
Sbjct: 482 LDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVG 541

Query: 513 CAQNGKGKEALQFYDQMLARG-TKPDYITFVGLLFACSHAGLAENARWYFESMDK-VYGI 570
            +++G+G+E L+ +  M      KPD +T + +L  CSH GL +     F  M      +
Sbjct: 542 YSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEV 601

Query: 571 KPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAAN 630
           +P  +HY C++DLLGRSG++ EA   + +M  EP A +W +LL ACRVH ++++GE A  
Sbjct: 602 EPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQ 661

Query: 631 NLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFI 690
            L E+EP NA  YV LSN+Y++AG+WED + +R LM  + + KEPG S +E +  +H F 
Sbjct: 662 QLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFH 721

Query: 691 SEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFG 750
           + DR HP R +I  K+ E+    KE GYVPD++  LH+V+EE KE  L  HSEKLA++FG
Sbjct: 722 ASDRSHPRREEICMKVKELSTSFKEVGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFG 781

Query: 751 LLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           L+  P   PIR+ KNLR+C DCH   KYIS VY R + LRD NRFH    G CSC DYW
Sbjct: 782 LIASPASVPIRVIKNLRICVDCHNFAKYISKVYGREVSLRDKNRFHRIVGGKCSCEDYW 840



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 141/516 (27%), Positives = 250/516 (48%), Gaps = 59/516 (11%)

Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA 168
           S +   I   +   QM L G+       + +L  C  K   + G++ H + IKT +  + 
Sbjct: 219 STFTTHIHLQQPLLQMALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSV 278

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIEC-FRDMR 227
           F+ T L+ +Y KC  + +A  +F   P+ +N V+WT MI+ YSQ GY  +A+   F D++
Sbjct: 279 FLRTRLIVLYTKCDSLGDAHNVFDEMPE-RNVVSWTAMISAYSQRGYASQALNLFFADVK 337

Query: 228 VE--GV------------------ESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFE 267
           +   GV                  E N+FTF ++LT+C +      G Q+H  I+   +E
Sbjct: 338 ISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYE 397

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM 327
            +V+V S+L+DMYAK G +  AR + E     + VS  ++I G+A+ G  +EAL LF+++
Sbjct: 398 DHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRL 457

Query: 328 HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL 387
               +K +  TY  VL   +    L+  K VH+ ++++    +  + N+LIDMY+K GNL
Sbjct: 458 QGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNL 517

Query: 388 DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR-ISGICPDHVVVSSILSA 446
             +  +F+ M ++ VISW +++ G + HG   E LK F+ MR  + + PD V + ++LS 
Sbjct: 518 TYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSG 577

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITW 506
           C+   + + G  +            + V+  +       GC+ D                
Sbjct: 578 CSHGGLEDKGLNI----FNDMSSGKIEVEPKM----EHYGCVVD---------------- 613

Query: 507 TALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDK 566
              ++G  ++G+ +EA +F  +M    T   + + +G     S+  + E A        +
Sbjct: 614 ---LLG--RSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAG------QQ 662

Query: 567 VYGIKPG-PDHYACMIDLLGRSGKLIEAKALLDQMV 601
           +  I+PG   +Y  + +L   +G+  +  +L D M+
Sbjct: 663 LLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLML 698



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 192/381 (50%), Gaps = 34/381 (8%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFW---QM 124
           F    +I  Y     L +A  +F+E P +N  +W+++I  YS  G   +A  LF+   ++
Sbjct: 279 FLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKI 338

Query: 125 QLEGY------------------RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDL 166
            L G                    P+++T   VL  C+       G Q H   IK  ++ 
Sbjct: 339 SLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYED 398

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
           + FV + L+DMYAK   I EA  +F+  P+ ++ V+ T +I+GY+Q G   +A+E FR +
Sbjct: 399 HVFVGSSLLDMYAKDGKIHEARTVFECLPE-RDVVSCTAIISGYAQLGLDEEALELFRRL 457

Query: 227 RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDL 286
           + EG++SN  T+  +LTA + ++A D G QVH  +L S   + V +Q++LIDMY+KCG+L
Sbjct: 458 QGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNL 517

Query: 287 DSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR-DIKIDDFTYPSVLNC 345
             +RR+ +       +SWN+M+VG+++ G  +E L LF  M     +K D  T  +VL+ 
Sbjct: 518 TYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSG 577

Query: 346 FA------SNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ- 398
            +        +++ N  S   + V+   E Y      ++D+  + G ++ AF     M  
Sbjct: 578 CSHGGLEDKGLNIFNDMSSGKIEVEPKMEHY----GCVVDLLGRSGRVEEAFEFIKKMPF 633

Query: 399 DKDVISWTSLITGCAYHGSYE 419
           +     W SL+  C  H + +
Sbjct: 634 EPTAAIWGSLLGACRVHSNVD 654



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 6/111 (5%)

Query: 20  IGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYA 78
           +G   + H + + +     L  +L+D +S  G +  + ++F+ M +R   +WN M+  Y+
Sbjct: 484 LGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYS 543

Query: 79  NSGRLREAKKLFN----ETPFK-NFFTWSSLIYGYSNYGLDIEAFELFWQM 124
             G  RE  KLF     ET  K +  T  +++ G S+ GL+ +   +F  M
Sbjct: 544 KHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDM 594


>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g26782, mitochondrial; Flags: Precursor
 gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 237/630 (37%), Positives = 374/630 (59%), Gaps = 11/630 (1%)

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           LF  + D  +  +W ++I   +++G   +A+  F  MR   +   + +FP  + AC+++ 
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
               G Q H      G++++++V SALI MY+ CG L+ AR++ +     N VSW SMI 
Sbjct: 91  DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTY------PSVLNCFASNIDLNNAKSVHSLIV 363
           G+   G   +A+SLFK +   +   DD  +       SV++  +        +S+HS ++
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210

Query: 364 KTGFEGYKFVNNALIDMYAK--QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           K GF+    V N L+D YAK  +G +  A  +F+ + DKD +S+ S+++  A  G   EA
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270

Query: 422 LKYFSDMRISGICP-DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
            + F  +  + +   + + +S++L A +    L  G+ +H   ++ G    + V  S++ 
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           +Y KCG +  A + FD M  ++V +WTA+I G   +G   +AL+ +  M+  G +P+YIT
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390

Query: 541 FVGLLFACSHAGL-AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ 599
           FV +L ACSHAGL  E  RW F +M   +G++PG +HY CM+DLLGR+G L +A  L+ +
Sbjct: 391 FVSVLAACSHAGLHVEGWRW-FNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQR 449

Query: 600 MVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDA 659
           M  +PD+ +W +LL+ACR+H ++EL E +   LFEL+  N   Y+ LS++Y+ AG+W+D 
Sbjct: 450 MKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDV 509

Query: 660 ARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYV 719
            RVR +MK+RG+ K PG S +E N +VH+F+  D  HP R  IY  + E+   + EAGYV
Sbjct: 510 ERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYV 569

Query: 720 PDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYI 779
            + +   H+V+EE KE+ L  HSEKLA+AFG++    G+ + + KNLRVC DCH  +K I
Sbjct: 570 SNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLI 629

Query: 780 SAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           S +  R  ++RD+ RFHHFK G CSCGDYW
Sbjct: 630 SKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 222/437 (50%), Gaps = 13/437 (2%)

Query: 89  LFNETPFK-NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKG 147
           LFN    K + F+W+S+I   +  G   EA   F  M+     P++ +    ++ CS   
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90

Query: 148 LLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
            +  G+Q H  A    +  + FV + L+ MY+ C  + +A  +F   P  +N V+WT+MI
Sbjct: 91  DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPK-RNIVSWTSMI 149

Query: 208 TGYSQNGYGFKAIECFRDMRVEGVESNQFTF------PSILTACAAVSARDFGAQVHGCI 261
            GY  NG    A+  F+D+ V+  + +   F       S+++AC+ V A+     +H  +
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209

Query: 262 LSSGFEANVYVQSALIDMYAKCGD--LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKE 319
           +  GF+  V V + L+D YAK G+  +  AR++ +     + VS+NS++  +A+ G   E
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269

Query: 320 ALSLFKKM-HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           A  +F+++   + +  +  T  +VL   + +  L   K +H  +++ G E    V  ++I
Sbjct: 270 AFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII 329

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
           DMY K G ++ A   F+ M++K+V SWT++I G   HG   +AL+ F  M  SG+ P+++
Sbjct: 330 DMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYI 389

Query: 439 VVSSILSACAELTV-LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
              S+L+AC+   + +E  +  +A+  + G    L     +V +  + G +  A  +   
Sbjct: 390 TFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQR 449

Query: 498 MHTR-DVITWTALIMGC 513
           M  + D I W++L+  C
Sbjct: 450 MKMKPDSIIWSSLLAAC 466



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/371 (29%), Positives = 184/371 (49%), Gaps = 20/371 (5%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  + +I  Y+  G+L +A+K+F+E P +N  +W+S+I GY   G  ++A  LF  + 
Sbjct: 110 DIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLL 169

Query: 126 L-EGYRPSQYTLD-----NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYA 179
           + E        LD     +V+  CS        E  H + IK  FD    V   L+D YA
Sbjct: 170 VDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYA 229

Query: 180 KC--KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQF 236
           K     +  A  +F    D K+ V++ ++++ Y+Q+G   +A E FR + + + V  N  
Sbjct: 230 KGGEGGVAVARKIFDQIVD-KDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAI 288

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           T  ++L A +   A   G  +H  ++  G E +V V +++IDMY KCG +++AR+  +  
Sbjct: 289 TLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRM 348

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNA 355
           +  N  SW +MI G+   G   +AL LF  M    ++ +  T+ SVL  C  + + +   
Sbjct: 349 KNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGW 408

Query: 356 KSVHSLI----VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLIT 410
           +  +++     V+ G E Y      ++D+  + G L  A+ +   M+ K D I W+SL+ 
Sbjct: 409 RWFNAMKGRFGVEPGLEHY----GCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLA 464

Query: 411 GCAYHGSYEEA 421
            C  H + E A
Sbjct: 465 ACRIHKNVELA 475



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 7/180 (3%)

Query: 36  ASDLNRALVDFSNSGEIDEA----GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN 91
           A  L+  L+  S+SG +        Q+     + D     ++I  Y   GR+  A+K F+
Sbjct: 287 AITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFD 346

Query: 92  ETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQR 151
               KN  +W+++I GY  +G   +A ELF  M   G RP+  T  +VL  CS  GL   
Sbjct: 347 RMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVE 406

Query: 152 GEQFHGYAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
           G ++   A+K  F +   +     +VD+  +   + +A  L +      + + W++++  
Sbjct: 407 GWRWFN-AMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465


>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
 gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
          Length = 923

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 251/755 (33%), Positives = 408/755 (54%), Gaps = 15/755 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D      ++ AY   G L  A  +F+    ++   W+++I     +    EA ELF QM+
Sbjct: 173 DVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVAHEQGDEALELFRQMR 232

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           L G  P++ T    L  C          + H +A +   D +  V T LV+MY K   + 
Sbjct: 233 LGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTVVQTALVNMYGKFGKVD 292

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +AE +F+   + ++ V+W  M+T  + NG+  KA +CFR+M + G   ++ T+ +IL AC
Sbjct: 293 DAEEIFERIQE-RDVVSWNAMLTANACNGFHDKAFKCFREMLLVGELPSRITYVAILNAC 351

Query: 246 ---AAVSARDFGAQVH---GCILSSGFEANVYVQSALIDMYAKCGDLDSA---RRLLEYS 296
              A +   DF   +    GC + S    +V + +A+++MY++C    SA     LLE  
Sbjct: 352 FLAAHLKHGDFVKTLAVEGGCGIES---VDVVMGTAIMNMYSRCKSPKSAFSSSLLLEQD 408

Query: 297 EIDNEVS-WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
                +  WN+++  +      +EA ++F+ M    + ID  +  +V N   S+  L   
Sbjct: 409 RDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLMTVFNACGSSASLEKG 468

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           K +HSL+ ++       V NAL+ MYA+ G+L+ A  +F+ M  ++VISWT+++   +  
Sbjct: 469 KWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQL 528

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G   EAL+ F  + + G+ P+ V  +++L+AC  L  +   + V A   ++G   ++ V 
Sbjct: 529 GLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACLSETGFFGNVEVA 588

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           N L+    KCG + +    F  M  ++ ++W   I   AQ+G G   ++ +  M   G  
Sbjct: 589 NGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQHGNGVRGVELFQTMQLEGID 648

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
              +T +G+L +CSHAGL      YF +M   YG     +HY+C+IDLL R+G L  A+ 
Sbjct: 649 TGSVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAEHYSCVIDLLSRAGWLEHAEE 708

Query: 596 LLDQM-VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAG 654
            + ++  G+     W  LL  C++HGDLE G RA   +  L P +  PY+ + N+Y+ AG
Sbjct: 709 FVKRLPFGDQSVFPWITLLCGCKLHGDLERGGRATQRILGLNPGSTGPYLVMHNLYAGAG 768

Query: 655 KWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIK 714
           KW +AA VRK M   G +KEPG SW+E   ++H F   D  HP  ++I+ +++ +   +K
Sbjct: 769 KWPEAAAVRKSMVELGPKKEPGLSWIEVKGRIHEFRVGDTSHPRSSEIHRELERLNEEMK 828

Query: 715 EAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHT 774
            AG+V D+   +++++ + KE  L  HSEKLA+AFGL++   G P+RI KNLRVC DCH+
Sbjct: 829 RAGFVCDIKAVVYDLQAKEKESLLCQHSEKLAIAFGLISTAAGEPLRIMKNLRVCSDCHS 888

Query: 775 AMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           A K+IS +  R I++RD+ RFHHF+ G CSC D+W
Sbjct: 889 ATKFISGLVGREIVVRDAYRFHHFRGGACSCEDFW 923



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 166/576 (28%), Positives = 276/576 (47%), Gaps = 42/576 (7%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F    ++A Y   G   EA+ +F     K+   W+SLI   +  G   EAF LF +MQL+
Sbjct: 76  FLGARLLAMYCKCGSPEEARAVFQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQ 135

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT---------CFDLNAFVVTGLVDMY 178
           G  P+  T   VL  C            H + + T           +L+  V T +++ Y
Sbjct: 136 GVMPNDVTYVAVLGACG-----------HPWEVDTIRARVEACGSLELDVIVATAVMNAY 184

Query: 179 AKCKCIFEAEYLFKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
            KC  +  A  +F    DG   ++   W  MI+    +  G +A+E FR MR+ GV  N+
Sbjct: 185 GKCGDLDSAWGVF----DGILVRDAAVWNAMISLLVAHEQGDEALELFRQMRLGGVTPNK 240

Query: 236 FTFPSILTACAAVSARDFGA--QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
            T  + L AC    +RDF    ++H        +A+  VQ+AL++MY K G +D A  + 
Sbjct: 241 GTCVAALNACC--HSRDFSEALRIHAFARELAGDADTVVQTALVNMYGKFGKVDDAEEIF 298

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDL 352
           E  +  + VSWN+M+   A  GFH +A   F++M          TY ++LN CF +   L
Sbjct: 299 ERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGELPSRITYVAILNACFLA-AHL 357

Query: 353 NNAKSVHSLIVK--TGFEGYKFV-NNALIDMYAKQGNLDCAFMVFNLM-QDKD---VISW 405
            +   V +L V+   G E    V   A+++MY++  +   AF    L+ QD+D   ++ W
Sbjct: 358 KHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPSIMMW 417

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
            ++++    +  +EEA   F  M + G+  D V + ++ +AC     LE G+ +H++  +
Sbjct: 418 NTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHSLLTE 477

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
           S       V N+LV +YA+ G + DA  +FD+M TR+VI+WTA++   +Q G  +EAL+ 
Sbjct: 478 SELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRI 537

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
           +  +L  G  P+ +TF  +L AC +      A+     + +  G     +    ++  LG
Sbjct: 538 FRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACLSET-GFFGNVEVANGLLCTLG 596

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGD 621
           + G L E      Q++   +   W   ++A   HG+
Sbjct: 597 KCGSLEEVANFF-QVMAVKNQVSWNTAIAANAQHGN 631



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 138/506 (27%), Positives = 244/506 (48%), Gaps = 25/506 (4%)

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
           T   ++  C+    L +G + HG  ++   ++  F+   L+ MY KC    EA  +F+  
Sbjct: 42  TFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVFQGI 101

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD-F 253
            D K+ VAWT++I   +++G+  +A   FR+M+++GV  N  T+ ++L AC      D  
Sbjct: 102 QD-KSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVDTI 160

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
            A+V  C      E +V V +A+++ Y KCGDLDSA  + +   + +   WN+MI     
Sbjct: 161 RARVEAC---GSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVA 217

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
                EAL LF++M    +  +  T  + LN    + D + A  +H+   +   +    V
Sbjct: 218 HEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTVV 277

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
             AL++MY K G +D A  +F  +Q++DV+SW +++T  A +G +++A K F +M + G 
Sbjct: 278 QTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGE 337

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD----NSLVLVYAKCGCIN 489
            P  +   +IL+AC     L+ G  V  + ++ GGC   SVD     +++ +Y++C    
Sbjct: 338 LPSRITYVAILNACFLAAHLKHGDFVKTLAVE-GGCGIESVDVVMGTAIMNMYSRCKSPK 396

Query: 490 DANRVFDSM----HTRD---VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
            A   F S       RD   ++ W  ++    +N + +EA   +  ML  G   D ++ +
Sbjct: 397 SA---FSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLM 453

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
            +  AC  +   E  +W    + +    +  P   A ++ +  R G L +A+ + D M  
Sbjct: 454 TVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNA-LVTMYARLGSLEDAREIFDAMTT 512

Query: 603 EPDATVWKALLSACRVHGDLELGERA 628
             +   W A++    VH  L L   A
Sbjct: 513 R-NVISWTAMVG---VHSQLGLNREA 534



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 135/567 (23%), Positives = 251/567 (44%), Gaps = 50/567 (8%)

Query: 45  DFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSL 104
           DFS +  I    +  E   D D      ++  Y   G++ +A+++F     ++  +W+++
Sbjct: 255 DFSEALRIHAFAR--ELAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAM 312

Query: 105 IYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCF 164
           +   +  G   +AF+ F +M L G  PS+ T   +L  C L   L+ G+     A++   
Sbjct: 313 LTANACNGFHDKAFKCFREMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGC 372

Query: 165 DLNAFVV---TGLVDMYAKC---KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFK 218
            + +  V   T +++MY++C   K  F +  L +   D  + + W T+++ Y +N    +
Sbjct: 373 GIESVDVVMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEE 432

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID 278
           A   FR M + GV  +  +  ++  AC + ++ + G  +H  +  S       VQ+AL+ 
Sbjct: 433 AFTIFRLMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVT 492

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
           MYA+ G L+ AR + +     N +SW +M+   ++ G ++EAL +F+ +    +  ++ T
Sbjct: 493 MYARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVT 552

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
           + +VLN   +   +  AK V + + +TGF G   V N L+    K G+L+     F +M 
Sbjct: 553 FTAVLNACGNLASIPAAKLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMA 612

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
            K+ +SW + I   A HG+    ++ F  M++ GI    V +  +LS+C+   ++  G  
Sbjct: 613 VKNQVSWNTAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYS 672

Query: 459 VHAVFLKSGGCSSLSVDNSLVL-VYAKCGCINDANRVFDSMHTRD--VITWTALIMGCAQ 515
                    G  + +   S V+ + ++ G +  A      +   D  V  W  L+ GC  
Sbjct: 673 YFLNMHVDYGFPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDQSVFPWITLLCGCKL 732

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
           +G            L RG +                           +  ++ G+ PG  
Sbjct: 733 HGD-----------LERGGR---------------------------ATQRILGLNPGST 754

Query: 576 -HYACMIDLLGRSGKLIEAKALLDQMV 601
             Y  M +L   +GK  EA A+   MV
Sbjct: 755 GPYLVMHNLYAGAGKWPEAAAVRKSMV 781



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 145/294 (49%), Gaps = 12/294 (4%)

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
           D   D  T+ ++++  A   DL   + +H LI++ G E   F+   L+ MY K G+ + A
Sbjct: 35  DGSADASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEA 94

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
             VF  +QDK V++WTSLI   A  G  +EA   F +M++ G+ P+ V   ++L AC   
Sbjct: 95  RAVFQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGH- 153

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVD----NSLVLVYAKCGCINDANRVFDSMHTRDVITW 506
                  +V  +  +   C SL +D     +++  Y KCG ++ A  VFD +  RD   W
Sbjct: 154 -----PWEVDTIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVW 208

Query: 507 TALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDK 566
            A+I     + +G EAL+ + QM   G  P+  T V  L AC H+     A        +
Sbjct: 209 NAMISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARE 268

Query: 567 VYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
           + G        A ++++ G+ GK+ +A+ + ++ + E D   W A+L+A   +G
Sbjct: 269 LAGDADTVVQTA-LVNMYGKFGKVDDAEEIFER-IQERDVVSWNAMLTANACNG 320



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 67/177 (37%), Gaps = 33/177 (18%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  L      G ++E    F+ M+ ++  +WNT IAA A                     
Sbjct: 589 NGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANA--------------------- 627

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG-EQFHGY 158
                      +G  +   ELF  MQLEG      TL  VL  CS  GL+ +G   F   
Sbjct: 628 ----------QHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNM 677

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHV-AWTTMITGYSQNG 214
            +   F   A   + ++D+ ++   +  AE   K  P G   V  W T++ G   +G
Sbjct: 678 HVDYGFPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDQSVFPWITLLCGCKLHG 734


>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Glycine max]
          Length = 674

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 231/603 (38%), Positives = 361/603 (59%), Gaps = 31/603 (5%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK--------------- 282
           F ++L AC  + +   G Q+H  I +SG  ++ ++ + L+++Y+K               
Sbjct: 72  FSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMP 131

Query: 283 ----------------CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK 326
                            G+L+SA+ L +     N  +WN+M+ G  +   ++EAL LF +
Sbjct: 132 RRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSR 191

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
           M+      D+++  SVL   A    L   + VH+ ++K GFE    V  +L  MY K G+
Sbjct: 192 MNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGS 251

Query: 387 LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSA 446
           +     V N M D  +++W +L++G A  G +E  L  +  M+++G  PD +   S++S+
Sbjct: 252 MHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISS 311

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITW 506
           C+EL +L  G+Q+HA  +K+G  S +SV +SLV +Y++CGC+ D+ + F     RDV+ W
Sbjct: 312 CSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKERDVVLW 371

Query: 507 TALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDK 566
           +++I     +G+G+EA++ +++M       + ITF+ LL+ACSH GL +     F+ M K
Sbjct: 372 SSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDMMVK 431

Query: 567 VYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGE 626
            YG+K    HY C++DLLGRSG L EA+A++  M  + DA +WK LLSAC++H + E+  
Sbjct: 432 KYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKNAEIAR 491

Query: 627 RAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQV 686
           R A+ +  ++P ++  YV L+N+YS+A +W++ + VR+ MK + ++KEPG SWVE  +QV
Sbjct: 492 RVADEVLRIDPQDSASYVLLANIYSSANRWQNVSEVRRAMKDKMVKKEPGISWVEVKNQV 551

Query: 687 HIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLA 746
           H F   D  HP   +I   ++E+   IK  GYVPD +  LH+++ E KE  L +HSEKLA
Sbjct: 552 HQFHMGDECHPKHVEINQYLEELTSEIKRQGYVPDTSSVLHDMDNEEKEQILRHHSEKLA 611

Query: 747 VAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCG 806
           +AF L+  P+G PIR+ KNLRVC DCH A+KYIS +    II+RDS+RFHHFK G CSCG
Sbjct: 612 IAFALMNTPEGVPIRVMKNLRVCSDCHVAIKYISEIKKLEIIVRDSSRFHHFKNGTCSCG 671

Query: 807 DYW 809
           DYW
Sbjct: 672 DYW 674



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/387 (31%), Positives = 203/387 (52%), Gaps = 5/387 (1%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  L  +S  GE+  A  LF++M  R+  + N MI AY   G L  AK LF+E P +N  
Sbjct: 108 NHLLNLYSKFGELQAAVALFDRMPRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVA 167

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           TW++++ G + + ++ EA  LF +M    + P +Y+L +VLR C+  G L  G+Q H Y 
Sbjct: 168 TWNAMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYV 227

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           +K  F+ N  V   L  MY K   + + E +    PD  + VAW T+++G +Q GY    
Sbjct: 228 MKCGFECNLVVGCSLAHMYMKAGSMHDGERVINWMPDC-SLVAWNTLMSGKAQKGYFEGV 286

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           ++ +  M++ G   ++ TF S++++C+ ++    G Q+H   + +G  + V V S+L+ M
Sbjct: 287 LDQYCMMKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSM 346

Query: 280 YAKCGDL-DSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
           Y++CG L DS +  LE  E D  V W+SMI  +   G  +EA+ LF +M   ++  ++ T
Sbjct: 347 YSRCGCLQDSIKTFLECKERD-VVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEIT 405

Query: 339 YPSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA-FMVFNL 396
           + S+L  C    +          ++ K G +        L+D+  + G L+ A  M+ ++
Sbjct: 406 FLSLLYACSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSM 465

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALK 423
               D I W +L++ C  H + E A +
Sbjct: 466 PVKADAIIWKTLLSACKIHKNAEIARR 492



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 123/492 (25%), Positives = 219/492 (44%), Gaps = 40/492 (8%)

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EAFE F    L           N+L+ C     +  G+Q H     +    + F+   L+
Sbjct: 56  EAFESF----LSEIWAEPRLFSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLL 111

Query: 176 DMYAK---------------------CKCIFEA----------EYLFKMFPDGKNHVAWT 204
           ++Y+K                     C  + +A          + LF   PD +N   W 
Sbjct: 112 NLYSKFGELQAAVALFDRMPRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPD-RNVATWN 170

Query: 205 TMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS 264
            M+TG ++     +A+  F  M       ++++  S+L  CA + A   G QVH  ++  
Sbjct: 171 AMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKC 230

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLF 324
           GFE N+ V  +L  MY K G +    R++ +    + V+WN+++ G A++G+ +  L  +
Sbjct: 231 GFECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQY 290

Query: 325 KKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
             M     + D  T+ SV++  +    L   K +H+  VK G      V ++L+ MY++ 
Sbjct: 291 CMMKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRC 350

Query: 385 GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
           G L  +   F   +++DV+ W+S+I    +HG  EEA+K F++M    +  + +   S+L
Sbjct: 351 GCLQDSIKTFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLL 410

Query: 445 SACAELTVLEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDSMHTR-D 502
            AC+   + + G  +  + +K  G  + L     LV +  + GC+ +A  +  SM  + D
Sbjct: 411 YACSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKAD 470

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
            I W  L+  C  +   + A +  D++L R    D  ++V L    S A   +N      
Sbjct: 471 AIIWKTLLSACKIHKNAEIARRVADEVL-RIDPQDSASYVLLANIYSSANRWQNVSEVRR 529

Query: 563 SM-DKVYGIKPG 573
           +M DK+   +PG
Sbjct: 530 AMKDKMVKKEPG 541


>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 251/682 (36%), Positives = 380/682 (55%), Gaps = 46/682 (6%)

Query: 132 SQYTLDNVLRLCSLKGL--LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           S+     VL+L   K +  LQ   Q HG  +++    + +V   L+  YA        ++
Sbjct: 27  SKLPQKTVLKLFDSKSITSLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPH-FSNFDF 85

Query: 190 LFKMFPD--GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             K+F      N   W  +I G  +N   FKAI  +  M ++    N+FT+P++  AC+ 
Sbjct: 86  ALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSV 144

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
             A   G Q+HG ++  G  ++V+++SA I MYA  G L+ AR++  YS   + V WN+M
Sbjct: 145 AQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMF-YSGESDVVCWNTM 203

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I G+ + G  + A  LF +M  ++I                                   
Sbjct: 204 IDGYLKCGVLEAAKGLFAQMPVKNIG---------------------------------- 229

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
                  N +I+  AK GNL  A  +F+ M ++D ISW+S++ G    G Y+EAL+ F  
Sbjct: 230 -----SWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQ 284

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           M+     P   ++SS+L+AC+ +  ++ G+ VHA   ++       +  +L+ +YAKCG 
Sbjct: 285 MQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGR 344

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           ++    VF+ M  R++ TW A+I G A +G+ ++AL+ + ++     KP+ IT VG+L A
Sbjct: 345 LDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTA 404

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
           C+HAG  +     F++M + YG+ P  +HY CM+DLLGRSG   EA+ L++ M  +P+A 
Sbjct: 405 CAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAA 464

Query: 608 VWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
           VW ALL ACR+HG+ +L ER    L ELEP N+  YV LSN+Y+  G+++D +++RKLMK
Sbjct: 465 VWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMK 524

Query: 668 SRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALH 727
            RGI+  PG S V+ N  VH F   D  HP   +IY K+  I   ++ AG+ PD +  L 
Sbjct: 525 DRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLF 584

Query: 728 NVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHI 787
           +++EE KE  + YHSEKLA+AFGL+    G  I I KNLRVC DCH+A K IS ++ R I
Sbjct: 585 DIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREI 644

Query: 788 ILRDSNRFHHFKAGNCSCGDYW 809
           I+RD  R+HHFK G CSC D+W
Sbjct: 645 IVRDRVRYHHFKNGTCSCKDFW 666



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 3/261 (1%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS 109
           G ++ A  LF +M  ++  +WN MI   A  G L +A+KLF+E   ++  +WSS++ GY 
Sbjct: 211 GVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYI 270

Query: 110 NYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAF 169
           + G   EA E+F QMQ E  RP ++ L +VL  CS  G + +G   H Y  +    L+A 
Sbjct: 271 SAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAV 330

Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
           + T L+DMYAKC  +     +F+   + +    W  MI G + +G    A+E F  ++  
Sbjct: 331 LGTALLDMYAKCGRLDMGWEVFEEMKE-REIFTWNAMIGGLAIHGRAEDALELFSKLQEG 389

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILS-SGFEANVYVQSALIDMYAKCGDLDS 288
            ++ N  T   +LTACA     D G ++   +    G +  +     ++D+  + G    
Sbjct: 390 RMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSE 449

Query: 289 ARRLLEYSEID-NEVSWNSMI 308
           A  L+    +  N   W +++
Sbjct: 450 AEDLINSMPMKPNAAVWGALL 470



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 99/425 (23%), Positives = 173/425 (40%), Gaps = 73/425 (17%)

Query: 65  RDGFTWNTMIAAYANS--GRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFW 122
           +D +    ++  YAN        A K+F+  P  N F W+ +I G        +A   + 
Sbjct: 63  QDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYG 122

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYA--- 179
           +M ++  RP+++T   + + CS+   +Q G Q HG+ +K     +  + +  + MYA   
Sbjct: 123 RMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFG 181

Query: 180 ---------------------------KCKCIFEAEYLFKMFP----------------- 195
                                      KC  +  A+ LF   P                 
Sbjct: 182 RLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKG 241

Query: 196 -------------DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
                          ++ ++W++M+ GY   G   +A+E F+ M+ E     +F   S+L
Sbjct: 242 GNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVL 301

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
            AC+ + A D G  VH  +  +  + +  + +AL+DMYAKCG LD    + E  +     
Sbjct: 302 AACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIF 361

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           +WN+MI G A  G  ++AL LF K+    +K +  T   VL   A    ++    +   +
Sbjct: 362 TWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTM 421

Query: 363 -----VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHG 416
                V    E Y      ++D+  + G    A  + N M  K +   W +L+  C  HG
Sbjct: 422 REFYGVDPELEHY----GCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHG 477

Query: 417 SYEEA 421
           +++ A
Sbjct: 478 NFDLA 482


>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 912

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 260/714 (36%), Positives = 395/714 (55%), Gaps = 17/714 (2%)

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
           +  +W++++      G   EAFE++ +M   G  P+++T   +L   S    L  G+  H
Sbjct: 182 DVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLH 241

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
            + I    +LN  + T +VDMY+KC+ + +A  +  + P+   ++ WTT+I+G++QN   
Sbjct: 242 AHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYL-WTTLISGFTQNLQV 300

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
            +AI  FRDM + G+  N FT+ S+L A +++ + D G Q H  ++  G E ++Y+ +AL
Sbjct: 301 REAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNAL 360

Query: 277 IDMYAKCGDLDS-ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           +DMY KC  + + A ++       N + W S+I GFA +   +++  LF +M A  ++ +
Sbjct: 361 VDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAEKRL-EDSFQLFAEMQAAGVRPN 419

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
            FT  ++L   +    L     +H  I+KT  +    V NAL+D YA  G +D A+ V  
Sbjct: 420 SFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIG 479

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
            M  +D I++T L       G +  ALK    M   GI  D   ++S LSA A L  +E 
Sbjct: 480 TMNLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMET 539

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
           G+Q+H   +KSG     SV NSLV +Y+KCG I+DANR F  +   D  +W  LI G + 
Sbjct: 540 GKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGFSW 599

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
           NG    AL  +D M   G KPD IT + L+ ACSH GL E    YF SM K Y I P  D
Sbjct: 600 NGLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKLD 659

Query: 576 HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
           HY C++DLLGR G+L EA  ++++M  +PD+ + K LL+AC +HG++ LGE  A    EL
Sbjct: 660 HYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLLNACNLHGNVALGEDMARRCLEL 719

Query: 636 EPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG 695
           +P +   Y+ L+N+Y  AG  +   + R+LM+ RG+R+ PG  W+E  S+VH F + ++ 
Sbjct: 720 DPSDPAIYLLLANLYDNAGLSDFGEKTRRLMRERGLRRSPGQCWMEIRSRVHHFSAGEKI 779

Query: 696 HPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLP 755
           +    +I  K++ ++   +   Y           E E K     YH E+LAVAFG+L  P
Sbjct: 780 N--EDEITEKLEFLITEFRNRRY--------QYQENEDK----FYHPEQLAVAFGVLNAP 825

Query: 756 QGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             +PIRI+KN  +C  CHT +   + V  R II+RD  RFH FK G CSC D +
Sbjct: 826 STSPIRIYKNSLICSHCHTFIMLSTQVIGREIIMRDRKRFHFFKDGQCSCRDIF 879



 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 175/590 (29%), Positives = 298/590 (50%), Gaps = 31/590 (5%)

Query: 43  LVDFSNSGEIDEA----GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF 98
           ++ F NS  + E       + +     D +  N +++ YA +  +  A+ LF+E P ++ 
Sbjct: 21  VLSFCNSNSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDV 80

Query: 99  FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
            +W++++  ++      +A +LF  M   G  P+++TL + LR C   G  +RG Q H  
Sbjct: 81  VSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCS 140

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCI-FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
           A+K   ++N FV T LV+ Y KC C   EA  L  +  DG + V+WTTM++   +NG   
Sbjct: 141 AVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVENGKWG 200

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           +A E +  M   GV  N+FTF  +L A ++     +G  +H  ++  G E N+ +++A++
Sbjct: 201 EAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAVV 260

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVS------WNSMIVGFARQGFHKEALSLFKKMHARD 331
           DMY+KC      RR+++  ++ N         W ++I GF +    +EA+S+F+ M    
Sbjct: 261 DMYSKC------RRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSG 314

Query: 332 IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDC-A 390
           +  ++FTY S+LN  +S + L+  +  HS ++  G E   ++ NAL+DMY K  ++   A
Sbjct: 315 LLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNA 374

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
             VF  +   +V+ WTSLI G A     E++ + F++M+ +G+ P+   +S+IL AC++ 
Sbjct: 375 VKVFREITSPNVMCWTSLIAGFA-EKRLEDSFQLFAEMQAAGVRPNSFTMSAILGACSKT 433

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
             L     +H   +K+     ++V N+LV  YA  G I++A  V  +M+ RD IT+T L 
Sbjct: 434 RSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITYTCLA 493

Query: 511 MGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGI 570
               Q G    AL+    M   G K D  +    L A +  G  E  +         Y +
Sbjct: 494 ARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQL-----HCYSV 548

Query: 571 KPGPDH----YACMIDLLGRSGKLIEA-KALLDQMVGEPDATVWKALLSA 615
           K G          ++ L  + G + +A +A  D  + EPDA  W  L+S 
Sbjct: 549 KSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKD--ISEPDAFSWNGLISG 596



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 129/298 (43%), Gaps = 66/298 (22%)

Query: 16  RSKIIGPARYTHNVGNSVKPASDLN----RALVD-FSNSGEIDEAGQLFEKMSDRDGFTW 70
           +++ + P    H  G+ +K   D++     ALVD ++  G IDEA  +   M+ RD  T+
Sbjct: 432 KTRSLVPTMMLH--GHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITY 489

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
             + A     G                            ++G+   A ++   M  +G +
Sbjct: 490 TCLAARLNQKG----------------------------HHGM---ALKVLIHMCNDGIK 518

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
             +++L + L   +  G ++ G+Q H Y++K+ F     V   LV +Y+KC  I +A   
Sbjct: 519 MDEFSLASFLSAAAGLGTMETGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRA 578

Query: 191 FKMF--PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
           FK    PD     +W  +I+G+S NG    A+  F DMR+ GV+ +  T  S+++AC+  
Sbjct: 579 FKDISEPDA---FSWNGLISGFSWNGLISHALSTFDDMRLAGVKPDSITLLSLISACS-- 633

Query: 249 SARDFGAQVHGCILSSGFEANVYVQS------------ALIDMYAKCGDLDSARRLLE 294
                    HG +L  G E    +Q              L+D+  + G L+ A  ++E
Sbjct: 634 ---------HGGLLELGLEYFHSMQKEYHITPKLDHYMCLVDLLGRGGRLEEAMGVIE 682



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 7/161 (4%)

Query: 21  GPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           G   + ++V +  +    ++ +LV  +S  G I +A + F+ +S+ D F+WN +I+ ++ 
Sbjct: 540 GKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGFSW 599

Query: 80  SGRLREAKKLFNETPF----KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYT 135
           +G +  A   F++        +  T  SLI   S+ GL     E F  MQ E +   +  
Sbjct: 600 NGLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITPK-- 657

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
           LD+ + L  L G   R E+  G   K  F  ++ +   L++
Sbjct: 658 LDHYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLLN 698


>gi|297802258|ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314849|gb|EFH45272.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 693

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 232/605 (38%), Positives = 348/605 (57%), Gaps = 32/605 (5%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           T+ +++  C+   A + G +VH  I +SGF   + + + ++ MYAKCG L  AR++ +  
Sbjct: 89  TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCGSLVDARKVFDEM 148

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD-----------IKIDDFTYPSVLNC 345
              +  SWN M+ G+A  G  +EA +LF +M  RD           +K D      VL  
Sbjct: 149 PERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVKKDQPEEALVLYS 208

Query: 346 FASNID---------------------LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
               +                      +   K +H  IV+ G +  + + ++L+DMY K 
Sbjct: 209 LMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKC 268

Query: 385 GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
           G +D A  +F+ + DKDV+SWTS+I        + E    FS++  S   P+    S +L
Sbjct: 269 GCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSCERPNEYTFSGVL 328

Query: 445 SACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVI 504
           +ACA+LT  E G+QVH    + G        +SL+ +Y KCG I  A  V D     D++
Sbjct: 329 NACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESARHVVDGCPKPDLV 388

Query: 505 TWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESM 564
           + T+LI G AQNGK  EAL+++D +L  GTKPD++TFV +L AC+HAGL E    +F S+
Sbjct: 389 SLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSI 448

Query: 565 DKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLEL 624
            + + +    DHY C++DLL RSG+  + K++L +M  +P   +W ++L  C  +G+++L
Sbjct: 449 TEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEMPMKPSKFLWASVLGGCSTYGNIDL 508

Query: 625 GERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNS 684
            E AA  LF++EP N + YV ++N+Y+ AGKWE+  ++RK M+  GI K+PG SW E   
Sbjct: 509 AEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGITKKPGSSWTEIKR 568

Query: 685 QVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEK 744
           + H+FI+ D  HP+   I   + E+   +KE GYVP  +  LH+VE+E KE  L YHSEK
Sbjct: 569 KRHVFIAADTSHPMYNQIIEFLGELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEK 628

Query: 745 LAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCS 804
           LAVAF +L+  +G  I++FKNLR C DCH+A+K+IS +  R I +RDS RFH F+ G CS
Sbjct: 629 LAVAFAILSTEEGTAIKVFKNLRSCVDCHSAIKFISKITKRKITIRDSTRFHCFENGQCS 688

Query: 805 CGDYW 809
           C DYW
Sbjct: 689 CRDYW 693



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 205/385 (53%), Gaps = 4/385 (1%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           NR L  ++  G + +A ++F++M +RD  +WN M+  YA  G L EA+ LF+E P ++ +
Sbjct: 126 NRILGMYAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSY 185

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQ-LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
           +W++++ GY       EA  L+  MQ +   +P+ +T+ + +   +    ++RG++ HG+
Sbjct: 186 SWTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGH 245

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFK 218
            ++   D +  + + L+DMY KC CI EA  +F    D K+ V+WT+MI  Y ++    +
Sbjct: 246 IVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIID-KDVVSWTSMIDRYFKSSRWRE 304

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID 278
               F ++       N++TF  +L ACA ++  + G QVHG +   GF+   +  S+LID
Sbjct: 305 GFSLFSELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLID 364

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
           MY KCG+++SAR +++     + VS  S+I G+A+ G   EAL  F  +     K D  T
Sbjct: 365 MYTKCGNIESARHVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVT 424

Query: 339 YPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           + +VL+ C  + +     +  +S+  K            L+D+ A+ G  +    V + M
Sbjct: 425 FVNVLSACTHAGLVEKGLEFFYSITEKHDLTHTSDHYTCLVDLLARSGRFEQLKSVLSEM 484

Query: 398 QDK-DVISWTSLITGCAYHGSYEEA 421
             K     W S++ GC+ +G+ + A
Sbjct: 485 PMKPSKFLWASVLGGCSTYGNIDLA 509



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 137/510 (26%), Positives = 231/510 (45%), Gaps = 68/510 (13%)

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           Q+     +P   T  N++++CS    L+ G++ H +   + F     +   ++ MYAKC 
Sbjct: 77  QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRILGMYAKCG 136

Query: 183 CIFEAEYLFKMFPD------------------------------GKNHVAWTTMITGYSQ 212
            + +A  +F   P+                               ++  +WT M+TGY +
Sbjct: 137 SLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYSWTAMVTGYVK 196

Query: 213 NGYGFKAIECFRDM-RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVY 271
                +A+  +  M RV   + N FT  S + A AA+     G ++HG I+ +G +++  
Sbjct: 197 KDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHIVRAGLDSDEV 256

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD 331
           + S+L+DMY KCG +D AR + +     + VSW SMI  + +    +E  SLF ++    
Sbjct: 257 LWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLFSELIGSC 316

Query: 332 IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
            + +++T+  VLN  A        + VH  + + GF+ Y F +++LIDMY K GN++ A 
Sbjct: 317 ERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTKCGNIESAR 376

Query: 392 MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELT 451
            V +     D++S TSLI G A +G  +EALKYF  +  SG  PDHV   ++LSAC    
Sbjct: 377 HVVDGCPKPDLVSLTSLIGGYAQNGKPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAG 436

Query: 452 VLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIM 511
           ++E G                     L   Y+            D  HT D   +T L+ 
Sbjct: 437 LVEKG---------------------LEFFYS-------ITEKHDLTHTSD--HYTCLVD 466

Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIK 571
             A++G+ ++      +M     KP    +  +L  CS  G  + A    E+  +++ I+
Sbjct: 467 LLARSGRFEQLKSVLSEM---PMKPSKFLWASVLGGCSTYGNIDLAE---EAAQELFKIE 520

Query: 572 P-GPDHYACMIDLLGRSGKLIEAKALLDQM 600
           P  P  Y  M ++   +GK  E   +  +M
Sbjct: 521 PENPVTYVTMANIYAAAGKWEEEGKMRKRM 550



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 5/149 (3%)

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA 578
           G++ L+   Q+L R  KP   T+  L+  CS     E  +   E + +  G  PG   + 
Sbjct: 68  GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHI-RTSGFVPGIVIWN 126

Query: 579 CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM 638
            ++ +  + G L++A+ + D+M  E D   W  +++    + ++ L E A N   E+   
Sbjct: 127 RILGMYAKCGSLVDARKVFDEM-PERDVCSWNVMVNG---YAEVGLLEEARNLFDEMPER 182

Query: 639 NAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
           ++  +  +   Y    + E+A  +  LM+
Sbjct: 183 DSYSWTAMVTGYVKKDQPEEALVLYSLMQ 211


>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 684

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 239/659 (36%), Positives = 376/659 (57%), Gaps = 38/659 (5%)

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A YLF   P+  +   WT +I+G++Q+G+  KAI+ +  +    V  ++F   S+  AC
Sbjct: 29  RALYLFDKIPE-PDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVAKAC 87

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           AA        ++H   +  GF  ++ + +ALIDM+ KC  ++ AR + +   + + VSW 
Sbjct: 88  AASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVVSWT 147

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           SM   +   G  ++ + LF++M    I+ +  T  S+L   A  I L   + VH  I++ 
Sbjct: 148 SMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADYIKL--GREVHGFILRN 205

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT--------------- 410
             EG  +V++AL++MYA    L  A +VF+ M  +D++SW  ++T               
Sbjct: 206 EMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLF 265

Query: 411 --------------------GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
                               GC  +G +E AL     M+ SGI P+ + + S L  C  L
Sbjct: 266 HQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGCTNL 325

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
             L  G+++H    +      +++  +LVL+YAKCG +  +  VF++M  +DV+ W  +I
Sbjct: 326 ESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMI 385

Query: 511 MGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGI 570
           M  + +GKG E+L  +++ML  G +P+ +TF+G+L  CSH+ LA+     F SM   + I
Sbjct: 386 MANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSI 445

Query: 571 KPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAAN 630
            P  DHY+CM+D+L R+G+L EA   + +M  EP A  W ALL ACRV+ ++ELG  AA+
Sbjct: 446 TPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGACRVYKNVELGTLAAS 505

Query: 631 NLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFI 690
            LFE+EP NA  YV LSN+  TA KW +A+ +RK+M+ +G+ K PG SWV+  ++V+ F+
Sbjct: 506 QLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPGRSWVQVKNKVYSFV 565

Query: 691 SEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFG 750
           + D+ +  +  IY  +DEI   ++  GY P+ +F L NV++E +E  L  HSE+LAVAFG
Sbjct: 566 TGDKSNEQKDMIYRFLDEIDEKMRLDGYQPNTDFVLQNVDQEQREETLCSHSERLAVAFG 625

Query: 751 LLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +L       +R+FKNLR+CGDCH A+K I+ +    II+RDS RFHHF+ G C+C D+W
Sbjct: 626 ILNSSGKTTVRVFKNLRICGDCHNAIKLIAKIVGMQIIVRDSLRFHHFRDGYCTCNDFW 684



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/419 (30%), Positives = 201/419 (47%), Gaps = 38/419 (9%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +I    NSG L+ A  LF++ P  +  TW+ LI G++ +G   +A +++  +     RP 
Sbjct: 17  LIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPD 76

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
           ++ L +V + C+  G L   ++ H  AI+  F+ +  +   L+DM+ KCK +  A  +F 
Sbjct: 77  KFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFD 136

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
                K+ V+WT+M   Y   G   + I  FR+M + G+ +N  T  SIL ACA      
Sbjct: 137 DMV-VKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACA--DYIK 193

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE---YSEID---------- 299
            G +VHG IL +  E NVYV SAL++MYA    L  AR + +   + +I           
Sbjct: 194 LGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYF 253

Query: 300 ----------------------NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
                                 N+ SWN+ I G  + G H+ AL +  KM    IK +  
Sbjct: 254 LNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRI 313

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           T  S L    +   L   K +H  + +  F     +  AL+ +YAK G+L+ +  VFN M
Sbjct: 314 TIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTM 373

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
             KDV++W ++I   + HG   E+L  F+ M  SG+ P+ V    +LS C+   + + G
Sbjct: 374 PRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEG 432



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 181/387 (46%), Gaps = 14/387 (3%)

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           LI      GDL  A  L +     +  +W  +I G  + GF K+A+ ++  + +R+++ D
Sbjct: 17  LIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPD 76

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
            F   SV    A++ DL  AK +H   ++ GF     + NALIDM+ K   ++ A  VF+
Sbjct: 77  KFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFD 136

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
            M  KDV+SWTS+       G   + +  F +M ++GI  + + VSSIL ACA+   ++ 
Sbjct: 137 DMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADY--IKL 194

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
           G++VH   L++    ++ V ++LV +YA    +  A  VFDSM+ RD+++W  ++     
Sbjct: 195 GREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFL 254

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
           N + +  L  + QM   G K +  ++   +  C   G  E A      M    GIK  P+
Sbjct: 255 NKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQD-SGIK--PN 311

Query: 576 HYACMIDLLG-------RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
               +  L G       R GK I         +   D T+  AL+      GDLEL    
Sbjct: 312 RITIVSALPGCTNLESLRGGKEIHGYVFRHWFI--EDVTITTALVLLYAKCGDLELSRHV 369

Query: 629 ANNLFELEPMNAMPYVQLSNMYSTAGK 655
            N +   + +     +  ++M+   G+
Sbjct: 370 FNTMPRKDVVAWNTMIMANSMHGKGGE 396



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 174/369 (47%), Gaps = 49/369 (13%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           ++D    N +I  +     +  A+ +F++   K+  +W+S+ Y Y N G+  +   LF +
Sbjct: 109 NKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFRE 168

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYA---- 179
           M L G R +  T+ ++L  C+    ++ G + HG+ ++   + N +V + LV+MYA    
Sbjct: 169 MGLNGIRANSLTVSSILPACA--DYIKLGREVHGFILRNEMEGNVYVSSALVNMYASSLG 226

Query: 180 --KCKCIFEAEY-------------------------LF-KMFPDG--KNHVAWTTMITG 209
             + + +F++ Y                         LF +M  +G   N  +W   I+G
Sbjct: 227 LKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISG 286

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
             QNG    A+     M+  G++ N+ T  S L  C  + +   G ++HG +    F  +
Sbjct: 287 CMQNGQHELALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIED 346

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA 329
           V + +AL+ +YAKCGDL+ +R +       + V+WN+MI+  +  G   E+L LF KM  
Sbjct: 347 VTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLD 406

Query: 330 RDIKIDDFTYPSVLN-CFASNID------LNNAKSVHSLIVKTGFEGYKFVNNALIDMYA 382
             ++ +  T+  VL+ C  S +        N+  S HS  +    + Y    + ++D+ +
Sbjct: 407 SGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHS--ITPDADHY----SCMVDVLS 460

Query: 383 KQGNLDCAF 391
           + G L+ A+
Sbjct: 461 RAGRLEEAY 469



 Score = 45.8 bits (107), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 42/97 (43%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G +F      D      ++  YA  G L  ++ +FN  P K+   W+++I   S +G   
Sbjct: 336 GYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGG 395

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
           E+  LF +M   G  P+  T   VL  CS   L   G
Sbjct: 396 ESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEG 432


>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
          Length = 787

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 235/640 (36%), Positives = 365/640 (57%), Gaps = 2/640 (0%)

Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
           +++ L   YA+   +  AE          +  AW  +I  +S+ G    A+  FR +   
Sbjct: 44  LISSLAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHSRRGSPASALRVFRAL-PP 102

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
               +  TF   L+ACA +     G  V      +G++ +V+V S+L+ +YA+ G +  A
Sbjct: 103 AARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDA 162

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
            ++       + V+W++M+ GF   G   +A+ ++++M    +K D+     V+    + 
Sbjct: 163 VKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAA 222

Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
            ++    SVH  +++ G         +L+DMYAK G LD A  VF LM  ++ +SW+++I
Sbjct: 223 RNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMI 282

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
           +G A +G  +EAL+ F +M+ SGI PD   + S L AC+ +  L+ G+ VH   ++    
Sbjct: 283 SGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFDF 342

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
           + + +  + + +Y+KCG +  A  +F+ +  RD+I W A+I  C  +G+G++AL  + +M
Sbjct: 343 NCI-LGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEM 401

Query: 530 LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGK 589
              G +PD+ TF  LL A SH+GL E  + +F  M   + I P   HY C++DLL RSG 
Sbjct: 402 NETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGL 461

Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNM 649
           + EA  LL  M  EP   +W ALLS C  +  LELGE  A+N+ EL+P +      +SN+
Sbjct: 462 VEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNL 521

Query: 650 YSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEI 709
           Y+   KW+   +VRKLMK  G +K PGCS +E     H+F+ ED+ HP R +I SK+ ++
Sbjct: 522 YAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKL 581

Query: 710 MLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVC 769
            L +++ GY+P   F  H++EEE KE  L+YHSE+LA+AFGLL    G  + I KNLRVC
Sbjct: 582 DLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVC 641

Query: 770 GDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           GDCH A+KYIS +  R I++RD+ RFHHFK G CSC DYW
Sbjct: 642 GDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 153/483 (31%), Positives = 242/483 (50%), Gaps = 18/483 (3%)

Query: 71  NTMIAAYANSGRLREAKK-LFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGY 129
           +++ AAYA +G L  A+  L       +   W+++I  +S  G    A  +F  +     
Sbjct: 46  SSLAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHSRRGSPASALRVFRALP-PAA 104

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           RP   T    L  C+  G L+ GE     A    +  + FV + L+ +YA+   + +A  
Sbjct: 105 RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVK 164

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +F   P  ++ V W+TM+ G+   G    AI+ +R MR +GV+ ++     ++ AC A  
Sbjct: 165 VFVRMPR-RDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAAR 223

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
               GA VHG +L  G   +V   ++L+DMYAK G LD A R+       N+VSW++MI 
Sbjct: 224 NVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMIS 283

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID-LNNAKSVHSLIVKTGFE 368
           GFA+ G   EAL LF+ M A  I+ D     S L    SNI  L   +SVH  IV+  F+
Sbjct: 284 GFAQNGQSDEALRLFRNMQASGIQPDSGALVSAL-LACSNIGFLKLGRSVHGFIVRR-FD 341

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
               +  A IDMY+K G+L  A M+FN++ D+D+I W ++I  C  HG  ++AL  F +M
Sbjct: 342 FNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEM 401

Query: 429 RISGICPDHVVVSSILSACAELTVLE-----FGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
             +G+ PDH   +S+LSA +   ++E     FG+ V+   +       +     LV + A
Sbjct: 402 NETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYV----CLVDLLA 457

Query: 484 KCGCINDANRVFDSMHTRDVIT-WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
           + G + +A+ +  SM     +  W AL+ GC  N K +      D +L    +PD +  +
Sbjct: 458 RSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILE--LQPDDVGVL 515

Query: 543 GLL 545
            L+
Sbjct: 516 ALV 518



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 219/431 (50%), Gaps = 34/431 (7%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  ++++  YA  G + +A K+F   P ++  TWS+++ G+ + G  ++A +++ +M+
Sbjct: 142 DVFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMR 201

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            +G +  +  +  V++ C+    ++ G   HG+ ++    ++    T LVDMYAK   + 
Sbjct: 202 EDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLD 261

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A  +F +    +N V+W+ MI+G++QNG   +A+  FR+M+  G++ +     S L AC
Sbjct: 262 VACRVFGLMVH-RNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLAC 320

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           + +     G  VHG I+   F+ N  + +A IDMY+KCG L SA+ L       + + WN
Sbjct: 321 SNIGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWN 379

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +MI      G  ++AL+LF++M+   ++ D  T+ S+L+  +           HS +V+ 
Sbjct: 380 AMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALS-----------HSGLVEE 428

Query: 366 GFEGY-KFVNN-----------ALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGC 412
           G   + + VN+            L+D+ A+ G ++ A  +   M+ +  ++ W +L++GC
Sbjct: 429 GKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGC 488

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSAC-AELTVLEFGQQVHAVFLKSG---- 467
             +   E       +  I  + PD V V +++S   A     +  +QV  +   SG    
Sbjct: 489 LNNKKLELGESIADN--ILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKM 546

Query: 468 -GCSSLSVDNS 477
            GCSS+ +  +
Sbjct: 547 PGCSSIEIRGT 557



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 152/320 (47%), Gaps = 19/320 (5%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G L       D  T  +++  YA +G L  A ++F     +N  +WS++I G++  G   
Sbjct: 233 GHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSD 292

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  LF  MQ  G +P    L + L  CS  G L+ G   HG+ ++  FD N  + T  +
Sbjct: 293 EALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFNCILGTAAI 351

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMY+KC  +  A+ LF M  D ++ + W  MI     +G G  A+  F++M   G+  + 
Sbjct: 352 DMYSKCGSLASAQMLFNMISD-RDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDH 410

Query: 236 FTFPSILTACAAVSARD-----FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
            TF S+L+A +     +     FG  V+   ++   +  V     L+D+ A+ G ++ A 
Sbjct: 411 ATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYV----CLVDLLARSGLVEEAS 466

Query: 291 RLLEYSEIDNEVS-WNSMIVGFARQGFHKEALSLFKKM--HARDIKIDDFTYPSVL-NCF 346
            LL   + +  V+ W +++ G      + + L L + +  +  +++ DD    +++ N +
Sbjct: 467 DLLTSMKAEPTVAIWVALLSGC----LNNKKLELGESIADNILELQPDDVGVLALVSNLY 522

Query: 347 ASNIDLNNAKSVHSLIVKTG 366
           A+    +  + V  L+  +G
Sbjct: 523 AATKKWDKVRQVRKLMKDSG 542



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 67/183 (36%), Gaps = 45/183 (24%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           L  A +D +S  G +  A  LF  +SDRD   WN MIA     GR ++A  LF E     
Sbjct: 346 LGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQE----- 400

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                                     M   G RP   T  ++L   S  GL++ G+ + G
Sbjct: 401 --------------------------MNETGMRPDHATFASLLSALSHSGLVEEGKLWFG 434

Query: 158 YAIKTCFDLNAFVVTG-------LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
             +      N F +T        LVD+ A+   + EA  L            W  +++G 
Sbjct: 435 RMV------NHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGC 488

Query: 211 SQN 213
             N
Sbjct: 489 LNN 491


>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 681

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 252/670 (37%), Positives = 392/670 (58%), Gaps = 21/670 (3%)

Query: 147 GLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP--DGKNHVAWT 204
           G  +   Q H  +IKT    +  V + L+ +YA  + I   +Y   +F        V+W 
Sbjct: 26  GTEREANQLHALSIKTASLNHPSVSSRLLALYADPR-INNLQYAHSLFDWIQEPTLVSWN 84

Query: 205 TMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS 264
            +I  Y +N     AI  F  +  + V  + FT P +L  CA + A   G Q+HG +L  
Sbjct: 85  LLIKCYIENQRSNDAIALFCKLLCDFV-PDSFTLPCVLKGCARLGALQEGKQIHGLVLKI 143

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLF 324
           GF  + +V S+L+ MY+KCG+++  R++ +  E  + VSWNS+I G+AR G  + AL +F
Sbjct: 144 GFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMF 203

Query: 325 KKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN----NALIDM 380
           ++M  +D     F++  +++  + +  L  A+ V        F+     N    NA+I+ 
Sbjct: 204 EEMPEKD----SFSWTILIDGLSKSGKLEAARDV--------FDRMPIRNSVSWNAMING 251

Query: 381 YAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVV 440
           Y K G+ + A  +F+ M ++ +++W S+ITG   +  + +ALK F  M    I P++  +
Sbjct: 252 YMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTI 311

Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT 500
              +SA + +  L  G+ VH+  +KSG  +   +   L+ +Y+KCG +  A RVF S+  
Sbjct: 312 LGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPK 371

Query: 501 RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWY 560
           + +  WT++I+G   +G  ++ L+ +D+M   G KP  ITF+G+L ACSHAG AE+A  Y
Sbjct: 372 KKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRY 431

Query: 561 FESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
           F+ M   YGIKP  +HY C+ID+L R+G L EAK  +++M  + +  +W +LLS  R HG
Sbjct: 432 FKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHG 491

Query: 621 DLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWV 680
           ++ +GE AA +L +L P     YV LSNMY+ AG WE   +VR++MK +G++K+PGCS +
Sbjct: 492 NIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPGCSSI 551

Query: 681 ETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEG-KEIGLA 739
           E    +H FI  D+ HP   +IY K+ E+   +  AG++PD    L  +EE+  KE  L 
Sbjct: 552 EHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDNEKEAELE 611

Query: 740 YHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFK 799
            HSE+LA+AFGLL +  G+PIRI KNLR+C DCH   K +S +Y R II+RD +RFHHFK
Sbjct: 612 THSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGSRFHHFK 671

Query: 800 AGNCSCGDYW 809
           +G+CSC D+W
Sbjct: 672 SGSCSCKDFW 681



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 152/531 (28%), Positives = 246/531 (46%), Gaps = 39/531 (7%)

Query: 46  FSNSGEIDEAGQL----FEKMSDRDGFTWNTMIAAYANS--GRLREAKKLFNETPFKNFF 99
             N G   EA QL     +  S       + ++A YA+     L+ A  LF+        
Sbjct: 22  LQNCGTEREANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLV 81

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           +W+ LI  Y       +A  LF ++ L  + P  +TL  VL+ C+  G LQ G+Q HG  
Sbjct: 82  SWNLLIKCYIENQRSNDAIALFCKL-LCDFVPDSFTLPCVLKGCARLGALQEGKQIHGLV 140

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           +K  F ++ FV++ LV MY+KC  I     +F    D K+ V+W ++I GY++ G    A
Sbjct: 141 LKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMED-KDVVSWNSLIDGYARCGEIELA 199

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAV----SARDFGAQVHGCILSSGFEANVYVQSA 275
           +E F +M     E + F++  ++   +      +ARD        +       N    +A
Sbjct: 200 LEMFEEMP----EKDSFSWTILIDGLSKSGKLEAARD--------VFDRMPIRNSVSWNA 247

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           +I+ Y K GD ++A+ L +     + V+WNSMI G+ R     +AL LF+ M   DI  +
Sbjct: 248 MINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPN 307

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
             T    ++  +  + L   + VHS IVK+GF+    +   LI+MY+K G++  A  VF 
Sbjct: 308 YTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFR 367

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
            +  K +  WTS+I G   HG  E+ L+ F +M  +G+ P  +    +L+AC+      F
Sbjct: 368 SIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAG---F 424

Query: 456 GQQVHAVF----LKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALI 510
            +  H  F       G   S+     L+ V  + G + +A    + M  + + + WT+L+
Sbjct: 425 AEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLL 484

Query: 511 MGCAQNGK---GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENAR 558
            G  ++G    G+ A Q     LA  T   Y+    +  A   AGL E  R
Sbjct: 485 SGSRKHGNIRMGEYAAQHLID-LAPDTTGCYVILSNMYAA---AGLWEKVR 531



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 138/277 (49%), Gaps = 6/277 (2%)

Query: 43  LVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTW 101
           L+D  S SG+++ A  +F++M  R+  +WN MI  Y  +G    AK+LF++ P ++  TW
Sbjct: 217 LIDGLSKSGKLEAARDVFDRMPIRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTW 276

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIK 161
           +S+I GY       +A +LF  M  E   P+  T+   +   S    L  G   H Y +K
Sbjct: 277 NSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVK 336

Query: 162 TCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK-NHVAWTTMITGYSQNGYGFKAI 220
           + F  +  + T L++MY+KC  +  A  +F+  P  K  H  WT++I G   +G   + +
Sbjct: 337 SGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGH--WTSVIVGLGMHGLVEQTL 394

Query: 221 ECFRDMRVEGVESNQFTFPSILTACA-AVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           E F +M   G++ +  TF  +L AC+ A  A D            G + ++     LID+
Sbjct: 395 ELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDV 454

Query: 280 YAKCGDLDSARRLLEYSEID-NEVSWNSMIVGFARQG 315
             + G L+ A+  +E   I  N+V W S++ G  + G
Sbjct: 455 LCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHG 491


>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 768

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 241/662 (36%), Positives = 378/662 (57%), Gaps = 4/662 (0%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           R+    N +I  Y        A+ +F+    +N  +W+++I  ++      +A  LF  M
Sbjct: 78  RNTILSNHLITMYGRCAAPDSARMVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSM 137

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
              G  P ++ L + +R C+  G L  G Q H  AIK+    +  V   LV MY+K   +
Sbjct: 138 LRLGTAPDEFALGSAVRACAELGDLGLGRQVHAQAIKSDNGGHLIVQNALVTMYSKSGSV 197

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE-SNQFTFPSILT 243
            +   LF+   D K+  +W ++I G +Q G    A+  FR+M  EG+   N+F F S+  
Sbjct: 198 GDGFALFERIRD-KDLFSWGSIIAGLAQQGREMDALHIFREMIAEGMHHPNEFHFGSVFR 256

Query: 244 ACAAV-SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           AC+ V ++ ++G Q+HG  +    + N Y   +L DMYA+C  LDSA ++    E  + V
Sbjct: 257 ACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRIESPDLV 316

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SWNS+I  F+  G   EA+ LF +M    +K D  T  ++L        L   +S+HS +
Sbjct: 317 SWNSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSYL 376

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           VK G  G   V N+LI MY +  +   A  VF+   D+DV++W S++T C  H   E+  
Sbjct: 377 VKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDVF 436

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
           K F  +  S    D + ++++LSA AEL   E  +QVHA   K G  S   + N+L+  Y
Sbjct: 437 KLFRLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNALIDTY 496

Query: 483 AKCGCINDANRVFDSMHT-RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           AKCG ++DAN++F+ M T RDV +W++LI+G AQ G  KEAL  + +M   G KP+++TF
Sbjct: 497 AKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTF 556

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
           VG+L ACS  GL +   +Y+  M+  YGI P  +H +C+IDLL R+G+L EA   +DQM 
Sbjct: 557 VGVLIACSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQMP 616

Query: 602 GEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
            EPD  +W  LL+A R H D+E+G+RAA  +  ++P ++  YV L N+Y+++G W + AR
Sbjct: 617 FEPDIIMWNTLLAASRTHNDVEMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGNWNEFAR 676

Query: 662 VRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPD 721
           ++K M+S G++K PG SW++   ++ +FI EDR HP   ++Y+ +D I   + +AGY+P+
Sbjct: 677 LKKDMRSSGVQKSPGKSWIKLKGELKVFIVEDRSHPESDEMYTMLDLIGFEMVKAGYIPE 736

Query: 722 MN 723
           ++
Sbjct: 737 LS 738



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 233/476 (48%), Gaps = 37/476 (7%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  +S SG + +   LFE++ D+D F+W ++IA  A  GR                 
Sbjct: 185 NALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGR----------------- 227

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVLRLCSLK-GLLQRGEQFHG 157
                         +++A  +F +M  EG + P+++   +V R CS+    L+ GEQ HG
Sbjct: 228 --------------EMDALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHG 273

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
             +K   D N++    L DMYA+C  +  A  +F    +  + V+W ++I  +S +G   
Sbjct: 274 LCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRI-ESPDLVSWNSLINAFSADGLLS 332

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           +A+  F +MR   ++ +  T  ++L AC    A   G  +H  ++  G   +V V ++LI
Sbjct: 333 EAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLI 392

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
            MY +C D  SA  +   +   + V+WNS++    +    ++   LF+ +H+    +D  
Sbjct: 393 SMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRI 452

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           +  +VL+  A       AK VH+   K G      ++NALID YAK G+LD A  +F +M
Sbjct: 453 SLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIM 512

Query: 398 -QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
              +DV SW+SLI G A  G  +EAL  F+ MR  G+ P+HV    +L AC+ + +++ G
Sbjct: 513 GTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLIACSRVGLVDEG 572

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVL-VYAKCGCINDANRVFDSM-HTRDVITWTALI 510
              +++     G        S V+ + A+ G +++A +  D M    D+I W  L+
Sbjct: 573 CYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLL 628



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 205/432 (47%), Gaps = 22/432 (5%)

Query: 245 CAAVSARDFGAQVHGCILSSGFEA-----NVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
           C+ + +   G  VH  +L+S   A     N  + + LI MY +C   DSAR + +     
Sbjct: 50  CSRLRSFPQGRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDR 109

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           N VSW ++I   A+     +A+ LF  M       D+F   S +   A   DL   + VH
Sbjct: 110 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVH 169

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
           +  +K+   G+  V NAL+ MY+K G++   F +F  ++DKD+ SW S+I G A  G   
Sbjct: 170 AQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREM 229

Query: 420 EALKYFSDMRISGI-CPDHVVVSSILSACA-ELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
           +AL  F +M   G+  P+     S+  AC+  +  LE+G+Q+H + +K     +     S
Sbjct: 230 DALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCS 289

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
           L  +YA+C  ++ A +VF  + + D+++W +LI   + +G   EA+  + +M     KPD
Sbjct: 290 LGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPD 349

Query: 538 YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC--MIDLLGRSGKLIEAKA 595
            IT + LL AC         R     + K+ G+  G D   C  +I +  R      A  
Sbjct: 350 GITVMALLCACVGCDALRQGRSIHSYLVKL-GL--GGDVMVCNSLISMYTRCLDFPSAMD 406

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL--EPMNAMPYVQLSNMYSTA 653
           +  +   + D   W ++L+AC  H  +E        LF L    M ++  + L+N+ S +
Sbjct: 407 VFHE-TNDRDVVTWNSILTACVQHRHME----DVFKLFRLLHSSMPSLDRISLNNVLSAS 461

Query: 654 ---GKWEDAARV 662
              G +E A +V
Sbjct: 462 AELGYFEMAKQV 473



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 171/360 (47%), Gaps = 6/360 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           DR+ +   ++   YA   +L  A K+F      +  +W+SLI  +S  GL  EA  LF +
Sbjct: 281 DRNSYAGCSLGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSE 340

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+    +P   T+  +L  C     L++G   H Y +K     +  V   L+ MY +C  
Sbjct: 341 MRYSSLKPDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLD 400

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
              A  +F    D ++ V W +++T   Q+ +     + FR +       ++ +  ++L+
Sbjct: 401 FPSAMDVFHETND-RDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLS 459

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV- 302
           A A +   +   QVH      G  ++  + +ALID YAKCG LD A +L E      +V 
Sbjct: 460 ASAELGYFEMAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVF 519

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SW+S+IVG+A+ G+ KEAL LF +M    +K +  T+  VL    S + L +    +  I
Sbjct: 520 SWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVL-IACSRVGLVDEGCYYYSI 578

Query: 363 VKT--GFEGYKFVNNALIDMYAKQGNL-DCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
           ++   G    K   + +ID+ A+ G L + A  V  +  + D+I W +L+     H   E
Sbjct: 579 MEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAASRTHNDVE 638



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 44/196 (22%)

Query: 23  ARYTHNVGNSVKPASD--LNRALVD-FSNSGEIDEAGQLFEKM-SDRDGFTWNTMIAAYA 78
           A+  H     V   SD  L+ AL+D ++  G +D+A +LFE M + RD F+W+++I  YA
Sbjct: 470 AKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYA 529

Query: 79  NSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDN 138
                                      +GY+      EA +LF +M+  G +P+  T   
Sbjct: 530 Q--------------------------FGYAK-----EALDLFARMRNLGVKPNHVTFVG 558

Query: 139 VLRLCSLKGLLQRGEQFHG-----YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKM 193
           VL  CS  GL+  G  ++      Y I    +  + V    +D+ A+   + EA      
Sbjct: 559 VLIACSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCV----IDLLARAGRLSEAAKFVDQ 614

Query: 194 FPDGKNHVAWTTMITG 209
            P   + + W T++  
Sbjct: 615 MPFEPDIIMWNTLLAA 630


>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 749

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 243/683 (35%), Positives = 389/683 (56%), Gaps = 14/683 (2%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           +L+ C  + L       HG+ +KT F  + FV+T LV++Y+KC  +  A  +F   P  +
Sbjct: 64  LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPR-R 122

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           N  AWTT++TGY QN +   A++ F  M   G   + +T   +L AC+++ + +FG QVH
Sbjct: 123 NVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVH 182

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
             ++    + +  + ++L   Y+K   L+ A +  +  +  + +SW S+I      G   
Sbjct: 183 AYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAA 242

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
            +LS F  M +  +K +++T  SVL+     + L+    +HSL +K G+     + N+++
Sbjct: 243 RSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIM 302

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG-----------CAYHGSYEEALKYFSD 427
            +Y K G L  A  +F  M+  ++++W ++I G            A H S   AL  F  
Sbjct: 303 YLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQK 362

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           +  SG+ PD    SS+LS C+ L  LE G+Q+H   +KSG  + + V  +LV +Y KCG 
Sbjct: 363 LYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGS 422

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           I+ A++ F  M +R +I+WT++I G A++G  ++ALQ ++ M   G KP+ +TFVG+L A
Sbjct: 423 IDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSA 482

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
           CSHAGLA+ A +YFE M K Y IKP  DH+AC+ID+  R G++ EA  ++ +M  EP+ T
Sbjct: 483 CSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNET 542

Query: 608 VWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
           +W  L++ CR HG  +LG  AA  L +L+P +   YV L NM+ +AG+W+D ++VRKLMK
Sbjct: 543 IWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMK 602

Query: 668 SRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALH 727
              + K    SW+    +V+ F   D+ H    ++Y  ++ ++  +K  GY P  +  + 
Sbjct: 603 EEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKALGYEPIEDVEVI 662

Query: 728 NVEEEGKEI--GLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLR 785
             EE  + +      HSEKLA+AFGLL LP   PIR+ K++ +C DCH  +++IS +  R
Sbjct: 663 EKEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRVVKSITMCRDCHNFIRFISLLKGR 722

Query: 786 HIILRDSNRFHHFKAGNCSCGDY 808
            I++RDS + H F  G CSCG Y
Sbjct: 723 EIVIRDSKQLHKFLNGYCSCGGY 745



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 164/528 (31%), Positives = 268/528 (50%), Gaps = 42/528 (7%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G + +     D F    ++  Y+  G +  A K+F+  P +N   W++L+ GY      +
Sbjct: 82  GHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPL 141

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
            A +LF +M   G  PS YTL  VL  CS    ++ G+Q H Y IK   D +  +   L 
Sbjct: 142 LALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLS 201

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
             Y+K + +  A   FK+  + K+ ++WT++I+    NG   +++  F DM  +G++ N+
Sbjct: 202 SFYSKFRRLEFAIKAFKIIKE-KDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNE 260

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
           +T  S+L+AC  +   D GAQ+H   +  G+ +++ ++++++ +Y KCG L  A++L E 
Sbjct: 261 YTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEG 320

Query: 296 SEIDNEVSWNSMIVGFARQ--------GFHKE---ALSLFKKMHARDIKIDDFTYPSVLN 344
            E  N V+WN+MI G A+           HK    AL++F+K++   +K D FT+ SVL+
Sbjct: 321 METLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLS 380

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
             ++ + L   + +H  I+K+G      V  AL+ MY K G++D A   F  M  + +IS
Sbjct: 381 VCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMIS 440

Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE-------LTVLEFGQ 457
           WTS+ITG A HG  ++AL+ F DMR+ GI P+ V    +LSAC+        L   E  Q
Sbjct: 441 WTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQ 500

Query: 458 QVHAV--FLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDV----ITWTALIM 511
           + + +   +    C        L+ +Y + G + +A   FD +H  +       W+ LI 
Sbjct: 501 KQYNIKPVMDHFAC--------LIDMYLRLGRVEEA---FDVVHKMNFEPNETIWSMLIA 549

Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW 559
           GC  +GK        +Q+L    K D  T+V LL     AG     RW
Sbjct: 550 GCRSHGKSDLGFYAAEQLLKLKPK-DVETYVSLLNMHISAG-----RW 591



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 78/201 (38%), Gaps = 44/201 (21%)

Query: 42  ALVDFSNS-GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           ALV   N  G ID+A + F +M  R   +W +MI  +A                      
Sbjct: 412 ALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFA---------------------- 449

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF----- 155
                     +GL  +A +LF  M+L G +P+Q T   VL  CS  GL      +     
Sbjct: 450 ---------RHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQ 500

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG- 214
             Y IK   D  A     L+DMY +   + EA  +        N   W+ +I G   +G 
Sbjct: 501 KQYNIKPVMDHFA----CLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGK 556

Query: 215 --YGFKAIECFRDMRVEGVES 233
              GF A E    ++ + VE+
Sbjct: 557 SDLGFYAAEQLLKLKPKDVET 577


>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 755

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 243/683 (35%), Positives = 389/683 (56%), Gaps = 14/683 (2%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           +L+ C  + L       HG+ +KT F  + FV+T LV++Y+KC  +  A  +F   P  +
Sbjct: 70  LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPR-R 128

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           N  AWTT++TGY QN +   A++ F  M   G   + +T   +L AC+++ + +FG QVH
Sbjct: 129 NVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVH 188

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
             ++    + +  + ++L   Y+K   L+ A +  +  +  + +SW S+I      G   
Sbjct: 189 AYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAA 248

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
            +LS F  M +  +K +++T  SVL+     + L+    +HSL +K G+     + N+++
Sbjct: 249 RSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIM 308

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG-----------CAYHGSYEEALKYFSD 427
            +Y K G L  A  +F  M+  ++++W ++I G            A H S   AL  F  
Sbjct: 309 YLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQK 368

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           +  SG+ PD    SS+LS C+ L  LE G+Q+H   +KSG  + + V  +LV +Y KCG 
Sbjct: 369 LYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGS 428

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           I+ A++ F  M +R +I+WT++I G A++G  ++ALQ ++ M   G KP+ +TFVG+L A
Sbjct: 429 IDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSA 488

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
           CSHAGLA+ A +YFE M K Y IKP  DH+AC+ID+  R G++ EA  ++ +M  EP+ T
Sbjct: 489 CSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNET 548

Query: 608 VWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
           +W  L++ CR HG  +LG  AA  L +L+P +   YV L NM+ +AG+W+D ++VRKLMK
Sbjct: 549 IWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMK 608

Query: 668 SRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALH 727
              + K    SW+    +V+ F   D+ H    ++Y  ++ ++  +K  GY P  +  + 
Sbjct: 609 EEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKALGYEPIEDVEVI 668

Query: 728 NVEEEGKEI--GLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLR 785
             EE  + +      HSEKLA+AFGLL LP   PIR+ K++ +C DCH  +++IS +  R
Sbjct: 669 EKEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRVVKSITMCRDCHNFIRFISLLKGR 728

Query: 786 HIILRDSNRFHHFKAGNCSCGDY 808
            I++RDS + H F  G CSCG Y
Sbjct: 729 EIVIRDSKQLHKFLNGYCSCGGY 751



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 164/528 (31%), Positives = 268/528 (50%), Gaps = 42/528 (7%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G + +     D F    ++  Y+  G +  A K+F+  P +N   W++L+ GY      +
Sbjct: 88  GHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPL 147

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
            A +LF +M   G  PS YTL  VL  CS    ++ G+Q H Y IK   D +  +   L 
Sbjct: 148 LALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLS 207

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
             Y+K + +  A   FK+  + K+ ++WT++I+    NG   +++  F DM  +G++ N+
Sbjct: 208 SFYSKFRRLEFAIKAFKIIKE-KDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNE 266

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
           +T  S+L+AC  +   D GAQ+H   +  G+ +++ ++++++ +Y KCG L  A++L E 
Sbjct: 267 YTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEG 326

Query: 296 SEIDNEVSWNSMIVGFARQ--------GFHKE---ALSLFKKMHARDIKIDDFTYPSVLN 344
            E  N V+WN+MI G A+           HK    AL++F+K++   +K D FT+ SVL+
Sbjct: 327 METLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLS 386

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
             ++ + L   + +H  I+K+G      V  AL+ MY K G++D A   F  M  + +IS
Sbjct: 387 VCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMIS 446

Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE-------LTVLEFGQ 457
           WTS+ITG A HG  ++AL+ F DMR+ GI P+ V    +LSAC+        L   E  Q
Sbjct: 447 WTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQ 506

Query: 458 QVHAV--FLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDV----ITWTALIM 511
           + + +   +    C        L+ +Y + G + +A   FD +H  +       W+ LI 
Sbjct: 507 KQYNIKPVMDHFAC--------LIDMYLRLGRVEEA---FDVVHKMNFEPNETIWSMLIA 555

Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW 559
           GC  +GK        +Q+L    K D  T+V LL     AG     RW
Sbjct: 556 GCRSHGKSDLGFYAAEQLLKLKPK-DVETYVSLLNMHISAG-----RW 597



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 78/201 (38%), Gaps = 44/201 (21%)

Query: 42  ALVDFSNS-GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           ALV   N  G ID+A + F +M  R   +W +MI  +A                      
Sbjct: 418 ALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFA---------------------- 455

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF----- 155
                     +GL  +A +LF  M+L G +P+Q T   VL  CS  GL      +     
Sbjct: 456 ---------RHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQ 506

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG- 214
             Y IK   D  A     L+DMY +   + EA  +        N   W+ +I G   +G 
Sbjct: 507 KQYNIKPVMDHFA----CLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGK 562

Query: 215 --YGFKAIECFRDMRVEGVES 233
              GF A E    ++ + VE+
Sbjct: 563 SDLGFYAAEQLLKLKPKDVET 583


>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 659

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 234/629 (37%), Positives = 370/629 (58%), Gaps = 9/629 (1%)

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           LF  + D  +  +W ++I   +++G   +A+  F  MR   +   + +FP  + AC+++ 
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLL 90

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
               G Q H      G++++++V SALI MY+ CG L+ AR++ +     N VSW SMI 
Sbjct: 91  DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150

Query: 310 GFARQGFHKEALSLFKKMHARD------IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           G+   G   +A+SLFK +   +      + +D     SV++  +        +S+HS ++
Sbjct: 151 GYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVI 210

Query: 364 KTGFEGYKFVNNALIDMYAK--QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           K GF+    V N L+D YAK  +G +  A  +F+ + DKD +S+ S+++  A  G   EA
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270

Query: 422 LKYFSDMRISGICP-DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
              F  +    +   + + +S++L A +    L  G+ +H   ++ G    + V  S++ 
Sbjct: 271 FDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           +Y KCG +  A   FD M  ++V +WTA+I G   +G   +AL+ +  M+  G +P+YIT
Sbjct: 331 MYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390

Query: 541 FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
           FV +L ACSHAGL +    +F +M   +G++PG +HY CM+DLLGR+G L +A  L+ +M
Sbjct: 391 FVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKM 450

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAA 660
             EPD+ +W +LL+ACR+H ++EL E +   LFEL+P N   Y+ LS++Y+ +G+W+D  
Sbjct: 451 KMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDVE 510

Query: 661 RVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
           RVR  MK+RG+ K PG S +E N +VH+F+  D  HP R  IY  + E+   + EAGYV 
Sbjct: 511 RVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVS 570

Query: 721 DMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYIS 780
           + +   H+V+EE KE+ L  HSEKLA+AFG++    G+ + + KNLRVC DCH  +K IS
Sbjct: 571 NTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLIS 630

Query: 781 AVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            +  R  ++RD+ RFHHFK G CSCGDYW
Sbjct: 631 KIVDREFVVRDAKRFHHFKDGFCSCGDYW 659



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 222/437 (50%), Gaps = 13/437 (2%)

Query: 89  LFNETPFK-NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKG 147
           LFN    K + F+W+S+I   +  G   EA   F  M+     P++ +    ++ CS   
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLL 90

Query: 148 LLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
            +  G+Q H  A    +  + FV + L+ MY+ C  + +A  +F   P  +N V+WT+MI
Sbjct: 91  DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPK-RNIVSWTSMI 149

Query: 208 TGYSQNGYGFKAIECFRDMRVEGVESNQFTF------PSILTACAAVSARDFGAQVHGCI 261
            GY  NG    A+  F+D+ +E  + +   F       S+++AC+ V+A+     +H  +
Sbjct: 150 RGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFV 209

Query: 262 LSSGFEANVYVQSALIDMYAKCGD--LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKE 319
           +  GF+  V V + L+D YAK G+  +  AR++ +     + VS+NS++  +A+ G   E
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269

Query: 320 ALSLFKKM-HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           A  +F+++   + +  +  T  +VL   + +  L   K +H  +++ G E    V  ++I
Sbjct: 270 AFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII 329

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
           DMY K G ++ A + F+ M++K+V SWT++I G   HG   +AL+ F  M  SG+ P+++
Sbjct: 330 DMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYI 389

Query: 439 VVSSILSACAELTVLEFG-QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
              S+L+AC+   + + G    +A+  + G    L     +V +  + G +  A  +   
Sbjct: 390 TFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQK 449

Query: 498 MHTR-DVITWTALIMGC 513
           M    D I W++L+  C
Sbjct: 450 MKMEPDSIIWSSLLAAC 466



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 181/373 (48%), Gaps = 24/373 (6%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  + +I  Y+  G+L +A+K+F+E P +N  +W+S+I GY   G  ++A  LF  + 
Sbjct: 110 DIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLL 169

Query: 126 L-EGYRPSQYTLD-----NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYA 179
           + E    +   LD     +V+  CS        E  H + IK  FD    V   L+D YA
Sbjct: 170 IEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYA 229

Query: 180 KC--KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES-NQF 236
           K     +  A  +F    D K+ V++ ++++ Y+Q+G   +A + FR +  E V + N  
Sbjct: 230 KGGEGGVAVARKIFDQIVD-KDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCI 288

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           T  ++L A +   A   G  +H  ++  G E +V V +++IDMY KCG +++AR   +  
Sbjct: 289 TLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRM 348

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNID---- 351
           +  N  SW +MI G+   G   +AL LF  M    ++ +  T+ SVL  C  + +     
Sbjct: 349 KNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGW 408

Query: 352 --LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSL 408
              N  K      V+ G E Y      ++D+  + G L  A+ +   M+ + D I W+SL
Sbjct: 409 HWFNAMKG--RFGVEPGLEHY----GCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSL 462

Query: 409 ITGCAYHGSYEEA 421
           +  C  H + E A
Sbjct: 463 LAACRIHKNVELA 475


>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
 gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 246/653 (37%), Positives = 366/653 (56%), Gaps = 4/653 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAF--ELFWQMQLEG 128
           N +I  YA  G L  AK +F     KN  +++ LI+G S+ G     F  ELF +M    
Sbjct: 47  NNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANN 106

Query: 129 YRPSQYTLDNVLRLCSLK-GLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
             P  +T   V    +L  G      Q H   IKT    + FV + LV+ Y K  C+FEA
Sbjct: 107 ILPDAHTFPGVFTAAALNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEA 166

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             LF   P+ +N V+WTTMI+GY+      +A+  F  MR+     N+F F S+L+A   
Sbjct: 167 RKLFDRMPE-RNLVSWTTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVC 225

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
               D G QVH  ++ +G    V V +AL+ MYAKCG+L+ +  L E     N ++W+++
Sbjct: 226 PEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSAL 285

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I G+++ G   +AL LF KMH       +FT   VL   +    +   K  H  ++K+G+
Sbjct: 286 ITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGY 345

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
           E   +   AL+DMYAK G    A   F+ + + D++ WTS+I G   +G  EEAL  +  
Sbjct: 346 ETQIYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGR 405

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           M++  I P+ + ++S+L AC+ L  LE G+Q+HA  +K G    LS+ ++L  +YAKCG 
Sbjct: 406 MQMRKILPNELTMASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGS 465

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           + +   +F  M  RD+++W A+I G +QNG G+EAL+ +++M   GTKPD+ITFV +L A
Sbjct: 466 LEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSA 525

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
           CSH G+ +    YF  M   + + P  +HYACM+D+L R+GKL EAK  ++  + +    
Sbjct: 526 CSHMGIVKRGWAYFNMMFDEFCLVPRVEHYACMVDVLSRAGKLNEAKEFIESAIIDHGMC 585

Query: 608 VWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
           +W+ LL ACR H + ELG  A   L EL    +  YV LS++Y+  G+  D  RVR++MK
Sbjct: 586 LWRILLPACRNHCNYELGAYAGEKLMELGSRESSAYVLLSSIYTAMGRLADVVRVRRMMK 645

Query: 668 SRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
            RG+RKE GCSW+E  S VH+F+  D+ HP   +I   I  +   +K+ GY P
Sbjct: 646 VRGVRKETGCSWIELKSHVHVFVVGDQIHPQIEEIQGAIWRLRKHMKDDGYRP 698



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 163/510 (31%), Positives = 263/510 (51%), Gaps = 11/510 (2%)

Query: 129 YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA-FVVTGLVDMYAKCKCIFEA 187
           + P   +  N+L   + +  L++G+  H + IK  +  +  ++   L+  YAKC  +  A
Sbjct: 3   HPPQNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGA 62

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFK--AIECFRDMRVEGVESNQFTFPSILTAC 245
           + +F+     KN V++  +I G S NG       +E FR M    +  +  TFP + TA 
Sbjct: 63  KLVFENLKH-KNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAA 121

Query: 246 AAVSARDFGA-QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           A     +F A QVH   + +    +V+V S+L++ Y K G +  AR+L +     N VSW
Sbjct: 122 ALNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSW 181

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
            +MI G+A +   KEAL +F  M   +  +++F + SVL+       +++ K VH ++VK
Sbjct: 182 TTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVK 241

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            G   +  V NAL+ MYAK GNL+ + M+F +  DK+ I+W++LITG +  G   +ALK 
Sbjct: 242 NGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKL 301

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           FS M  +G  P    +  +L AC+++  +E G+Q H   LKSG  + +    +LV +YAK
Sbjct: 302 FSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAK 361

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
            G   DA + FD +   D++ WT++I G  QNGK +EAL  Y +M  R   P+ +T   +
Sbjct: 362 FGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASV 421

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L ACS+    E  +       K YG+ P     + +  +  + G L E   +  +M+ + 
Sbjct: 422 LKACSNLAALEQGKQIHARTIK-YGLGPELSIRSALSTMYAKCGSLEEGVLIFRRML-QR 479

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFE 634
           D   W A++S    +G      R A  LFE
Sbjct: 480 DIVSWNAMISGLSQNGH----GREALELFE 505



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 143/451 (31%), Positives = 243/451 (53%), Gaps = 5/451 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  ++++  Y   G + EA+KLF+  P +N  +W+++I GY++  +  EA  +F  M+
Sbjct: 146 DVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMR 205

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           L     +++   +VL        +  G+Q H   +K        V+  LV MYAKC  + 
Sbjct: 206 LVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLN 265

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            +  LF+M  D KN + W+ +ITGYSQ G   KA++ F  M   G   ++FT   +L AC
Sbjct: 266 YSLMLFEMCSD-KNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKAC 324

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           + V+A + G Q HG +L SG+E  +Y  +AL+DMYAK G    AR+  ++    + V W 
Sbjct: 325 SDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWT 384

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           S+I G+ + G ++EALS++ +M  R I  ++ T  SVL   ++   L   K +H+  +K 
Sbjct: 385 SIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTIKY 444

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G      + +AL  MYAK G+L+   ++F  M  +D++SW ++I+G + +G   EAL+ F
Sbjct: 445 GLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREALELF 504

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLVLVYA 483
            +MR+ G  PDH+   ++LSAC+ + +++ G     +      C    V++   +V V +
Sbjct: 505 EEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMFDE-FCLVPRVEHYACMVDVLS 563

Query: 484 KCGCINDANRVFDS-MHTRDVITWTALIMGC 513
           + G +N+A    +S +    +  W  L+  C
Sbjct: 564 RAGKLNEAKEFIESAIIDHGMCLWRILLPAC 594



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 195/402 (48%), Gaps = 68/402 (16%)

Query: 37  SDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK 96
           S LN  +  ++  G ++ +  LFE  SD++  TW+ +I  Y+ +G   +A KLF+     
Sbjct: 249 SVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFS----- 303

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
                                     +M   G+ PS++TL  VL+ CS    ++ G+Q H
Sbjct: 304 --------------------------KMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTH 337

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE--YLFKMFPDGKNHVAWTTMITGYSQNG 214
           GY +K+ ++   +  T LVDMYAK     +A   + F + PD    V WT++I GY QNG
Sbjct: 338 GYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLLEPD---LVLWTSIIAGYVQNG 394

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQS 274
              +A+  +  M++  +  N+ T  S+L AC+ ++A + G Q+H   +  G    + ++S
Sbjct: 395 KNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRS 454

Query: 275 ALIDMYAKCGDLDSA----RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
           AL  MYAKCG L+      RR+L+     + VSWN+MI G ++ G  +EAL LF++M   
Sbjct: 455 ALSTMYAKCGSLEEGVLIFRRMLQ----RDIVSWNAMISGLSQNGHGREALELFEEMRLE 510

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG-------FEGYKFVNNA-----LI 378
             K D  T+ +VL+  +           H  IVK G       F+ +  V        ++
Sbjct: 511 GTKPDHITFVTVLSACS-----------HMGIVKRGWAYFNMMFDEFCLVPRVEHYACMV 559

Query: 379 DMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYE 419
           D+ ++ G L+ A   + + + D  +  W  L+  C  H +YE
Sbjct: 560 DVLSRAGKLNEAKEFIESAIIDHGMCLWRILLPACRNHCNYE 601


>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
          Length = 681

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 236/640 (36%), Positives = 365/640 (57%), Gaps = 2/640 (0%)

Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
           +++ L   YA+   +  AE          +  AW  +I  +S+ G    A+  FR +   
Sbjct: 44  LISSLAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHSRRGSPASALRVFRAL-PP 102

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
               +  TF   L+ACA +     G  V      +G++ +V+V S+L+ +YA+ G +  A
Sbjct: 103 AARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDA 162

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
            ++ +     + V+W++M+ GF   G   +A+ ++++M    +K D+     V+    + 
Sbjct: 163 VKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAA 222

Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
            ++    SVH  +++ G         +L+DMYAK G LD A  VF LM  ++ +SW+++I
Sbjct: 223 RNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMI 282

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
           +G A +G  +EAL+ F +M+ SGI PD   + S L AC+ +  L+ G+ VH   ++    
Sbjct: 283 SGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFDF 342

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
           + + +  + + +Y+KCG +  A  +F+ +  RD+I W A+I  C  +G+G++AL  + +M
Sbjct: 343 NCI-LGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEM 401

Query: 530 LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGK 589
              G +PD+ TF  LL A SH+GL E  + +F  M   + I P   HY C++DLL RSG 
Sbjct: 402 NETGMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKITPAEKHYVCLVDLLARSGL 461

Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNM 649
           + EA  LL  M  EP   +W ALLS C  +  LELGE  A+N+ EL+P +      +SN+
Sbjct: 462 VEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNL 521

Query: 650 YSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEI 709
           Y+   KW+   +VRKLMK  G +K PGCS +E     H F+ ED+ HP R +I SK+ ++
Sbjct: 522 YAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHAFLMEDQSHPQREEIVSKVAKL 581

Query: 710 MLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVC 769
            L +++ GY+P   F  H++EEE KE  L+YHSEKLA+AFGLL    G  + I KNLRVC
Sbjct: 582 DLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSEKLAIAFGLLNTGPGTRLVIIKNLRVC 641

Query: 770 GDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           GDCH A+KYIS +  R I++RD+ RFHHFK G CSC DYW
Sbjct: 642 GDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 151/479 (31%), Positives = 239/479 (49%), Gaps = 10/479 (2%)

Query: 71  NTMIAAYANSGRLREAKK-LFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGY 129
           +++ AAYA +G L  A+  L       +   W+++I  +S  G    A  +F  +     
Sbjct: 46  SSLAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHSRRGSPASALRVFRALP-PAA 104

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           RP   T    L  C+  G L+ GE     A    +  + FV + L+ +YA+   + +A  
Sbjct: 105 RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVK 164

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +F   P  ++ V W+TM+ G+   G    AI+ +R MR +GV+ ++     ++ AC A  
Sbjct: 165 VFDRMPR-RDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAAR 223

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
               GA VHG +L  G   +V   ++L+DMYAK G LD A R+       N+VSW++MI 
Sbjct: 224 NVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMIS 283

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID-LNNAKSVHSLIVKTGFE 368
           GFA+ G   EAL LF+ M A  I+ D     S L    SNI  L   +SVH  IV+  F+
Sbjct: 284 GFAQNGQSDEALRLFRNMQASGIQPDSGALVSAL-LACSNIGFLKLGRSVHGFIVRR-FD 341

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
               +  A IDMY+K G+L  A M+FN++ D+D+I W ++I  C  HG  ++AL  F +M
Sbjct: 342 FNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEM 401

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN-SLVLVYAKCGC 487
             +G+ PDH   +S+LSA +   ++E G+      +     +        LV + A+ G 
Sbjct: 402 NETGMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKITPAEKHYVCLVDLLARSGL 461

Query: 488 INDANRVFDSMHTRDVIT-WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           + +A+ +  SM     +  W AL+ GC  N K +      D +L    +PD +  + L+
Sbjct: 462 VEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILE--LQPDDVGVLALV 518



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 219/428 (51%), Gaps = 34/428 (7%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  ++++  YA  G + +A K+F+  P ++  TWS+++ G+ + G  ++A +++ +M+
Sbjct: 142 DVFVCSSLLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMR 201

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            +G +  +  +  V++ C+    ++ G   HG+ ++    ++    T LVDMYAK   + 
Sbjct: 202 EDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLD 261

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A  +F +    +N V+W+ MI+G++QNG   +A+  FR+M+  G++ +     S L AC
Sbjct: 262 VACRVFGLMVH-RNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLAC 320

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           + +     G  VHG I+   F+ N  + +A IDMY+KCG L SA+ L       + + WN
Sbjct: 321 SNIGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWN 379

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +MI      G  ++AL+LF++M+   ++ D  T+ S+L+  +           HS +V+ 
Sbjct: 380 AMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALS-----------HSGLVEE 428

Query: 366 GFEGYKFVNN------------ALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGC 412
           G   +  + N             L+D+ A+ G ++ A  +   M+ +  ++ W +L++GC
Sbjct: 429 GKLWFGCMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGC 488

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSAC-AELTVLEFGQQVHAVFLKSG---- 467
             +   E   +  +D  I  + PD V V +++S   A     +  +QV  +   SG    
Sbjct: 489 LNNKKLELG-ESIAD-NILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKM 546

Query: 468 -GCSSLSV 474
            GCSS+ +
Sbjct: 547 PGCSSIEI 554



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 127/258 (49%), Gaps = 6/258 (2%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G L       D  T  +++  YA +G L  A ++F     +N  +WS++I G++  G   
Sbjct: 233 GHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSD 292

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  LF  MQ  G +P    L + L  CS  G L+ G   HG+ ++  FD N  + T  +
Sbjct: 293 EALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFNCILGTAAI 351

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMY+KC  +  A+ LF M  D ++ + W  MI     +G G  A+  F++M   G+  + 
Sbjct: 352 DMYSKCGSLASAQMLFNMISD-RDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDH 410

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQS--ALIDMYAKCGDLDSARRLL 293
            TF S+L+A +     + G    GC+++  F+     +    L+D+ A+ G ++ A  LL
Sbjct: 411 ATFASLLSALSHSGLVEEGKLWFGCMVNH-FKITPAEKHYVCLVDLLARSGLVEEASDLL 469

Query: 294 EYSEIDNEVS-WNSMIVG 310
              + +  V+ W +++ G
Sbjct: 470 TSMKAEPTVAIWVALLSG 487



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 67/183 (36%), Gaps = 45/183 (24%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           L  A +D +S  G +  A  LF  +SDRD   WN MIA     GR ++A  LF E     
Sbjct: 346 LGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQE----- 400

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                                     M   G RP   T  ++L   S  GL++ G+ + G
Sbjct: 401 --------------------------MNETGMRPDHATFASLLSALSHSGLVEEGKLWFG 434

Query: 158 YAIKTCFDLNAFVVTG-------LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
             +      N F +T        LVD+ A+   + EA  L            W  +++G 
Sbjct: 435 CMV------NHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGC 488

Query: 211 SQN 213
             N
Sbjct: 489 LNN 491


>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 624

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 235/587 (40%), Positives = 339/587 (57%), Gaps = 33/587 (5%)

Query: 256 QVHGCILSSGFEANVYVQSALIDMYA--KCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           Q H  I+  G  A+      +I   A  K GDL+ A  + +     +   +N++  G+ R
Sbjct: 38  QYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLR 97

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
               +  + ++ +M  + +  + FTYP ++     +  +   K +H+ ++K GF    F 
Sbjct: 98  WQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFS 157

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG----------------- 416
            N LI MY    +L+ A  VF+ M  +DV+SWTSLITG +  G                 
Sbjct: 158 LNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERNS 217

Query: 417 --------------SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAV 462
                            EA   F  MR+  +  D  V +S+LSAC  L  LE G+ +H  
Sbjct: 218 VSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGY 277

Query: 463 FLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEA 522
             KSG      +  +++ +Y KCGC+  A+ VF+ +  + + +W  +I G A +GKG+ A
Sbjct: 278 IEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAA 337

Query: 523 LQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMID 582
           ++ + +M      PD ITFV +L AC+H+GL E  + YF+ M +V G+KPG +H+ CM+D
Sbjct: 338 IELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVD 397

Query: 583 LLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           LLGR+G L EA+ L+++M   PDA V  AL+ ACR+HG+ ELGE+    + ELEP N+  
Sbjct: 398 LLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGR 457

Query: 643 YVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDI 702
           YV L+N+Y++AG+WED A+VRKLM  RG++K PG S +E+ S V  FI+  R HP   +I
Sbjct: 458 YVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEI 517

Query: 703 YSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRI 762
           Y+K+DEI+  I+  GYVPD +  LH+++EE KE  L YHSEKLA+AFGLL    G  +RI
Sbjct: 518 YAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRI 577

Query: 763 FKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            KNLR+C DCH A K IS VY R II+RD NRFHHF+ G CSC DYW
Sbjct: 578 SKNLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 624



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 218/497 (43%), Gaps = 88/497 (17%)

Query: 63  SDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFW 122
           +D D         A + SG L  A ++F++ P  + + ++++  GY  + L      ++ 
Sbjct: 50  ADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYS 109

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           +M  +   P+++T   ++R C +   ++ G+Q H + +K  F  + F +  L+ MY   +
Sbjct: 110 RMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQ 169

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR------------------ 224
            + +A  +F   P  ++ V+WT++ITGYSQ G+  KA E F                   
Sbjct: 170 SLEQARRVFDNMPQ-RDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYV 228

Query: 225 -------------DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVY 271
                         MR+E V  ++F   S+L+AC  + A + G  +HG I  SG E +  
Sbjct: 229 QSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSK 288

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEIDNEV------SWNSMIVGFARQGFHKEALSLFK 325
           + + +IDMY KCG L+ A      SE+ NE+      SWN MI G A  G  + A+ LFK
Sbjct: 289 LATTVIDMYCKCGCLEKA------SEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFK 342

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           +M    +  D  T+ +VL+  A           HS +V+ G   ++++   L        
Sbjct: 343 EMEREMVAPDGITFVNVLSACA-----------HSGLVEEGKHYFQYMTEVL-------- 383

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
            L      F  M D         + G A  G  EEA K  ++M ++   PD  V+ +++ 
Sbjct: 384 GLKPGMEHFGCMVD---------LLGRA--GLLEEARKLINEMPVN---PDAGVLGALVG 429

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-----LVLVYAKCGCINDANRVFDSMHT 500
           AC      E G+Q+    ++      L   NS     L  +YA  G   D  +V   M+ 
Sbjct: 430 ACRIHGNTELGEQIGKKVIE------LEPHNSGRYVLLANLYASAGRWEDVAKVRKLMND 483

Query: 501 RDVITWTALIMGCAQNG 517
           R V       M  +++G
Sbjct: 484 RGVKKAPGFSMIESESG 500



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 144/276 (52%), Gaps = 2/276 (0%)

Query: 39  LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF 98
           LN  +  + N   +++A ++F+ M  RD  +W ++I  Y+  G + +A+++F   P +N 
Sbjct: 158 LNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERNS 217

Query: 99  FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
            +W+++I  Y       EAF LF +M+LE     ++   ++L  C+  G L++G+  HGY
Sbjct: 218 VSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGY 277

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFK 218
             K+  +L++ + T ++DMY KC C+ +A  +F   P  K   +W  MI G + +G G  
Sbjct: 278 IEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQ-KGISSWNCMIGGLAMHGKGEA 336

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALI 277
           AIE F++M  E V  +  TF ++L+ACA     + G      +    G +  +     ++
Sbjct: 337 AIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMV 396

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           D+  + G L+ AR+L+    ++ +      +VG  R
Sbjct: 397 DLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACR 432


>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
 gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
 gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
 gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 681

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 235/640 (36%), Positives = 365/640 (57%), Gaps = 2/640 (0%)

Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
           +++ L   YA+   +  AE          +  AW  +I  +S+ G    A+  FR +   
Sbjct: 44  LISSLAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHSRRGSPASALRVFRAL-PP 102

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
               +  TF   L+ACA +     G  V      +G++ +V+V S+L+ +YA+ G +  A
Sbjct: 103 AARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDA 162

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
            ++       + V+W++M+ GF   G   +A+ ++++M    +K D+     V+    + 
Sbjct: 163 VKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAA 222

Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
            ++    SVH  +++ G         +L+DMYAK G LD A  VF LM  ++ +SW+++I
Sbjct: 223 RNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMI 282

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
           +G A +G  +EAL+ F +M+ SGI PD   + S L AC+ +  L+ G+ VH   ++    
Sbjct: 283 SGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRRFDF 342

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
           + + +  + + +Y+KCG +  A  +F+ +  RD+I W A+I  C  +G+G++AL  + +M
Sbjct: 343 NCI-LGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEM 401

Query: 530 LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGK 589
              G +PD+ TF  LL A SH+GL E  + +F  M   + I P   HY C++DLL RSG 
Sbjct: 402 NETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYVCLVDLLARSGL 461

Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNM 649
           + EA  LL  M  EP   +W ALLS C  +  LELGE  A+N+ EL+P +      +SN+
Sbjct: 462 VEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILELQPDDVGVLALVSNL 521

Query: 650 YSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEI 709
           Y+   KW+   +VRKLMK  G +K PGCS +E     H+F+ ED+ HP R +I SK+ ++
Sbjct: 522 YAATKKWDKVRQVRKLMKDSGSKKMPGCSSIEIRGTRHVFVMEDQSHPQREEIVSKVAKL 581

Query: 710 MLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVC 769
            L +++ GY+P   F  H++EEE KE  L+YHSE+LA+AFGLL    G  + I KNLRVC
Sbjct: 582 DLEMRKMGYIPRTEFVYHDLEEEVKEQQLSYHSERLAIAFGLLNTGPGTRLVIIKNLRVC 641

Query: 770 GDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           GDCH A+KYIS +  R I++RD+ RFHHFK G CSC DYW
Sbjct: 642 GDCHDAIKYISKIADREIVVRDAKRFHHFKDGVCSCRDYW 681



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 153/483 (31%), Positives = 242/483 (50%), Gaps = 18/483 (3%)

Query: 71  NTMIAAYANSGRLREAKK-LFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGY 129
           +++ AAYA +G L  A+  L       +   W+++I  +S  G    A  +F  +     
Sbjct: 46  SSLAAAYARAGDLAAAESTLTATAASSSIAAWNAIIAAHSRRGSPASALRVFRALP-PAA 104

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           RP   T    L  C+  G L+ GE     A    +  + FV + L+ +YA+   + +A  
Sbjct: 105 RPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAMGDAVK 164

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +F   P  ++ V W+TM+ G+   G    AI+ +R MR +GV+ ++     ++ AC A  
Sbjct: 165 VFVRMPR-RDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQACTAAR 223

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
               GA VHG +L  G   +V   ++L+DMYAK G LD A R+       N+VSW++MI 
Sbjct: 224 NVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMIS 283

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID-LNNAKSVHSLIVKTGFE 368
           GFA+ G   EAL LF+ M A  I+ D     S L    SNI  L   +SVH  IV+  F+
Sbjct: 284 GFAQNGQSDEALRLFRNMQASGIQPDSGALVSAL-LACSNIGFLKLGRSVHGFIVRR-FD 341

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
               +  A IDMY+K G+L  A M+FN++ D+D+I W ++I  C  HG  ++AL  F +M
Sbjct: 342 FNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQEM 401

Query: 429 RISGICPDHVVVSSILSACAELTVLE-----FGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
             +G+ PDH   +S+LSA +   ++E     FG+ V+   +       +     LV + A
Sbjct: 402 NETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYV----CLVDLLA 457

Query: 484 KCGCINDANRVFDSMHTRDVIT-WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
           + G + +A+ +  SM     +  W AL+ GC  N K +      D +L    +PD +  +
Sbjct: 458 RSGLVEEASDLLTSMKAEPTVAIWVALLSGCLNNKKLELGESIADNILE--LQPDDVGVL 515

Query: 543 GLL 545
            L+
Sbjct: 516 ALV 518



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 220/428 (51%), Gaps = 34/428 (7%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  ++++  YA  G + +A K+F   P ++  TWS+++ G+ + G  ++A +++ +M+
Sbjct: 142 DVFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMR 201

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            +G +  +  +  V++ C+    ++ G   HG+ ++    ++    T LVDMYAK   + 
Sbjct: 202 EDGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLD 261

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A  +F +    +N V+W+ MI+G++QNG   +A+  FR+M+  G++ +     S L AC
Sbjct: 262 VACRVFGLMVH-RNDVSWSAMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLAC 320

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           + +     G  VHG I+   F+ N  + +A IDMY+KCG L SA+ L       + + WN
Sbjct: 321 SNIGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWN 379

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +MI      G  ++AL+LF++M+   ++ D  T+ S+L+  +           HS +V+ 
Sbjct: 380 AMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALS-----------HSGLVEE 428

Query: 366 GFEGY-KFVNN-----------ALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGC 412
           G   + + VN+            L+D+ A+ G ++ A  +   M+ +  ++ W +L++GC
Sbjct: 429 GKLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGC 488

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSAC-AELTVLEFGQQVHAVFLKSG---- 467
             +   E   +  +D  I  + PD V V +++S   A     +  +QV  +   SG    
Sbjct: 489 LNNKKLELG-ESIAD-NILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKM 546

Query: 468 -GCSSLSV 474
            GCSS+ +
Sbjct: 547 PGCSSIEI 554



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 126/261 (48%), Gaps = 12/261 (4%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G L       D  T  +++  YA +G L  A ++F     +N  +WS++I G++  G   
Sbjct: 233 GHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWSAMISGFAQNGQSD 292

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  LF  MQ  G +P    L + L  CS  G L+ G   HG+ ++  FD N  + T  +
Sbjct: 293 EALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR-FDFNCILGTAAI 351

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMY+KC  +  A+ LF M  D ++ + W  MI     +G G  A+  F++M   G+  + 
Sbjct: 352 DMYSKCGSLASAQMLFNMISD-RDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDH 410

Query: 236 FTFPSILTACAAVSARD-----FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
            TF S+L+A +     +     FG  V+   ++   +  V     L+D+ A+ G ++ A 
Sbjct: 411 ATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEKHYV----CLVDLLARSGLVEEAS 466

Query: 291 RLLEYSEIDNEVS-WNSMIVG 310
            LL   + +  V+ W +++ G
Sbjct: 467 DLLTSMKAEPTVAIWVALLSG 487



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 67/183 (36%), Gaps = 45/183 (24%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           L  A +D +S  G +  A  LF  +SDRD   WN MIA     GR ++A  LF E     
Sbjct: 346 LGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIACCGAHGRGQDALTLFQE----- 400

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                                     M   G RP   T  ++L   S  GL++ G+ + G
Sbjct: 401 --------------------------MNETGMRPDHATFASLLSALSHSGLVEEGKLWFG 434

Query: 158 YAIKTCFDLNAFVVTG-------LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
             +      N F +T        LVD+ A+   + EA  L            W  +++G 
Sbjct: 435 RMV------NHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGC 488

Query: 211 SQN 213
             N
Sbjct: 489 LNN 491


>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 250/682 (36%), Positives = 380/682 (55%), Gaps = 46/682 (6%)

Query: 132 SQYTLDNVLRLCSLKGL--LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           S+     VL+L   K +  LQ   Q H   +++    + +V   L+  YA        ++
Sbjct: 27  SKLPQKTVLKLFDSKSITSLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPH-FSNFDF 85

Query: 190 LFKMFPD--GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             K+F      N   W  +I G  +N   FKAI  +  M ++    N+FT+P++  AC+ 
Sbjct: 86  ALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSV 144

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
             A   G Q+HG ++  G  ++V+++SA I MYA  G L+ AR++  YS   + V WN+M
Sbjct: 145 AQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMF-YSGESDVVCWNTM 203

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I G+ + G  + A  LF +M  ++I                                   
Sbjct: 204 IDGYLKCGVLEAAKGLFAQMPVKNIG---------------------------------- 229

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
                  N +I+  AK GNL  A  +F+ M ++D ISW+S++ G    G Y+EAL+ F  
Sbjct: 230 -----SWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQ 284

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           M+     P   ++SS+L+AC+ +  ++ G+ VHA   ++       +  +L+ +YAKCG 
Sbjct: 285 MQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGR 344

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           ++    VF+ M  R++ TW A+I G A +G+ ++AL+ + ++     KP+ IT VG+L A
Sbjct: 345 LDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTA 404

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
           C+HAG  +     F++M + YG+ P  +HY CM+DLLGRSG   EA+ L++ M  +P+A 
Sbjct: 405 CAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAA 464

Query: 608 VWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
           VW ALL ACR+HG+ +L ER    L ELEP N+  YV LSN+Y+  G+++D +++RKLMK
Sbjct: 465 VWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMK 524

Query: 668 SRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALH 727
           +RGI+  PG S V+ N  VH F   D  HP   +IY K+  I   ++ AG+ PD +  L 
Sbjct: 525 NRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLF 584

Query: 728 NVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHI 787
           +++EE KE  + YHSEKLA+AFGL+    G  I I KNLRVC DCH+A K IS ++ R I
Sbjct: 585 DIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREI 644

Query: 788 ILRDSNRFHHFKAGNCSCGDYW 809
           I+RD  R+HHFK G CSC D+W
Sbjct: 645 IVRDRVRYHHFKNGTCSCKDFW 666



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 3/261 (1%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS 109
           G ++ A  LF +M  ++  +WN MI   A  G L +A+KLF+E   ++  +WSS++ GY 
Sbjct: 211 GVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYI 270

Query: 110 NYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAF 169
           + G   EA E+F QMQ E  RP ++ L +VL  CS  G + +G   H Y  +    L+A 
Sbjct: 271 SAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAV 330

Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
           + T L+DMYAKC  +     +F+   + +    W  MI G + +G    A+E F  ++  
Sbjct: 331 LGTALLDMYAKCGRLDMGWEVFEEMKE-REIFTWNAMIGGLAIHGRAEDALELFSKLQEG 389

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILS-SGFEANVYVQSALIDMYAKCGDLDS 288
            ++ N  T   +LTACA     D G ++   +    G +  +     ++D+  + G    
Sbjct: 390 RMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSE 449

Query: 289 ARRLLEYSEID-NEVSWNSMI 308
           A  L+    +  N   W +++
Sbjct: 450 AEDLINSMPMKPNAAVWGALL 470



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/425 (23%), Positives = 173/425 (40%), Gaps = 73/425 (17%)

Query: 65  RDGFTWNTMIAAYANS--GRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFW 122
           +D +    ++  YAN        A K+F+  P  N F W+ +I G        +A   + 
Sbjct: 63  QDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYG 122

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYA--- 179
           +M ++  RP+++T   + + CS+   +Q G Q HG+ +K     +  + +  + MYA   
Sbjct: 123 RMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFG 181

Query: 180 ---------------------------KCKCIFEAEYLFKMFP----------------- 195
                                      KC  +  A+ LF   P                 
Sbjct: 182 RLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKG 241

Query: 196 -------------DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
                          ++ ++W++M+ GY   G   +A+E F+ M+ E     +F   S+L
Sbjct: 242 GNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVL 301

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
            AC+ + A D G  VH  +  +  + +  + +AL+DMYAKCG LD    + E  +     
Sbjct: 302 AACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIF 361

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           +WN+MI G A  G  ++AL LF K+    +K +  T   VL   A    ++    +   +
Sbjct: 362 TWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTM 421

Query: 363 -----VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHG 416
                V    E Y      ++D+  + G    A  + N M  K +   W +L+  C  HG
Sbjct: 422 REFYGVDPELEHY----GCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHG 477

Query: 417 SYEEA 421
           +++ A
Sbjct: 478 NFDLA 482


>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
 gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
          Length = 721

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 247/654 (37%), Positives = 379/654 (57%), Gaps = 18/654 (2%)

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
           +A++   LV M AK   + EA  +F      KN  +W  +I+ Y+  G+   A+  F  M
Sbjct: 75  SAYLNNLLVLMLAKHGSLCEARSIFDAI-QHKNIFSWNIIISAYAHRGHPSTALHLFAKM 133

Query: 227 RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGD 285
               V     TF + L+AC+++     G ++H  I +S G   +V + +A+  MYAKCGD
Sbjct: 134 ---DVPPTAMTFATALSACSSLGDLQRGREIHARIKASRGIRPSVILDTAIFSMYAKCGD 190

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGF-HKEALSLFKKMHARDIKIDDFTYPSVLN 344
           L +A+ + +     N VSWN++I  +A+ G  H +AL LF+KM    ++    T+  VL 
Sbjct: 191 LSTAKSVFDRIPAKNVVSWNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLG 250

Query: 345 CFASNIDLNNAKSVHSLIVKTGFE---GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
             A N D+ + + +H+ IV+TG +       V NAL++MYAK G+L+ A  +F  MQ +D
Sbjct: 251 --ACN-DVTSLEKIHARIVETGLQFDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQRRD 307

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH- 460
            +S   +I   A  G  +E+++ F +M + G+  D    +S+++AC+    LEFG+++H 
Sbjct: 308 QVSMNVMIATFAQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIHK 367

Query: 461 ----AVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
                V  +     ++ V+ +LV +Y KCG +  A  VF +M T++ ++W A++  CA  
Sbjct: 368 RVVEPVLGRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACAHQ 427

Query: 517 GKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH 576
           G+G EA  F       G + D  +F+ +L ACSH+G+ E A  +F+ M   + + P  ++
Sbjct: 428 GQGDEAAAFLRAAACEGVELDSASFISVLIACSHSGMLEVAYDHFQLMLSDFDLVPAAEN 487

Query: 577 YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELE 636
           Y CM+DLL RSG+L +A  L++ M   PDA  W+ LL  CRV G LE    AA   F LE
Sbjct: 488 YRCMVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQAFNLE 547

Query: 637 PMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRK-EPGCSWVETNSQVHIFISEDRG 695
           P N  PY  LS++YS  GK ++   +R  MK RG+RK  PG S +E + +VH F++ D  
Sbjct: 548 PQNTAPYTLLSSLYSATGKKDELVELRSSMKERGLRKLVPGRSVIEVHGRVHEFVAGDSS 607

Query: 696 HPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLP 755
           HP    I  ++D + + +K+AG+VP  +  +H+++ E KE  LA HSEKLAVAFGL++  
Sbjct: 608 HPQIDKILRELDILNVELKQAGFVPSTDGVVHDLKTEDKEEILALHSEKLAVAFGLISTK 667

Query: 756 QGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            G P+ + KNLRVC DCH A+K IS +  R I +RD+NRFH F++G CSCGDYW
Sbjct: 668 SGIPLLVLKNLRVCSDCHGAIKLISKLRSRVITVRDANRFHRFQSGTCSCGDYW 721



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 146/472 (30%), Positives = 234/472 (49%), Gaps = 23/472 (4%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++   A  G L EA+ +F+    KN F+W+ +I  Y++ G    A  LF +M +    
Sbjct: 80  NLLVLMLAKHGSLCEARSIFDAIQHKNIFSWNIIISAYAHRGHPSTALHLFAKMDVP--- 136

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV--TGLVDMYAKCKCIFEAE 188
           P+  T    L  CS  G LQRG + H   IK    +   V+  T +  MYAKC  +  A+
Sbjct: 137 PTAMTFATALSACSSLGDLQRGREIHAR-IKASRGIRPSVILDTAIFSMYAKCGDLSTAK 195

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYG-FKAIECFRDMRVEGVESNQFTFPSILTACAA 247
            +F   P  KN V+W  +I  Y+Q+G+   +A++ F  M   GV   + TF  +L AC  
Sbjct: 196 SVFDRIP-AKNVVSWNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGACND 254

Query: 248 VSARDFGAQVHGCILSSGFE---ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           V++ +   ++H  I+ +G +    +V VQ+AL++MYAKCG L+ AR +    +  ++VS 
Sbjct: 255 VTSLE---KIHARIVETGLQFDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSM 311

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N MI  FA+QG  KE++ +F++M    +  DD T+ SV+   +    L   K +H  +V+
Sbjct: 312 NVMIATFAQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIHKRVVE 371

Query: 365 TGFEGYK------FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
               G K       V  AL+ MY K G L+ A  VF  M  K+ +SW +++  CA+ G  
Sbjct: 372 PVL-GRKCCLPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQG 430

Query: 419 EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD-NS 477
           +EA  +       G+  D     S+L AC+   +LE       + L        + +   
Sbjct: 431 DEAAAFLRAAACEGVELDSASFISVLIACSHSGMLEVAYDHFQLMLSDFDLVPAAENYRC 490

Query: 478 LVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMGCAQNGKGKEALQFYDQ 528
           +V + A+ G + DA+ + +SM  + D I W  L+ GC   G  + A    +Q
Sbjct: 491 MVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQ 542



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 179/388 (46%), Gaps = 63/388 (16%)

Query: 330 RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDC 389
           R+I+ D F   ++ +C     D N+   +H  I + G     ++NN L+ M AK G+L  
Sbjct: 40  REIQSDSFA-AAIRSCK----DSNSVSIIHQKITRAGLGSSAYLNNLLVLMLAKHGSLCE 94

Query: 390 AFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE 449
           A  +F+ +Q K++ SW  +I+  A+ G    AL  F+ M +    P  +  ++ LSAC+ 
Sbjct: 95  ARSIFDAIQHKNIFSWNIIISAYAHRGHPSTALHLFAKMDVP---PTAMTFATALSACSS 151

Query: 450 LTVLEFGQQVHAVFLKSGGC-SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
           L  L+ G+++HA    S G   S+ +D ++  +YAKCG ++ A  VFD +  ++V++W A
Sbjct: 152 LGDLQRGREIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVVSWNA 211

Query: 509 LIMGCAQNGKG-KEALQFYDQMLARGTKPDYITFVGLLFACS--------HAGLAEN--- 556
           LI   AQ+G    +AL  +++M   G +P   TFVG+L AC+        HA + E    
Sbjct: 212 LIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGACNDVTSLEKIHARIVETGLQ 271

Query: 557 ------------------------ARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIE 592
                                   AR  F  M +   +         MI    + G   E
Sbjct: 272 FDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVS-----MNVMIATFAQQGLGKE 326

Query: 593 AKALLDQM--VGEP-DATVWKALLSACRVHGDLELGERAANNLFELEPM--------NAM 641
           +  +  +M   G P D T + ++++AC   G LE G+R    +  +EP+        N +
Sbjct: 327 SIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIHKRV--VEPVLGRKCCLPNVV 384

Query: 642 PYVQLSNMYSTAGKWEDAARVRKLMKSR 669
               L +MY   G  E A  V K M ++
Sbjct: 385 VETALVSMYGKCGTLEQAKAVFKAMTTK 412



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 131/281 (46%), Gaps = 13/281 (4%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS 109
             I E G  F+    RD    N ++  YA  G L  A+ +F +   ++  + + +I  ++
Sbjct: 263 ARIVETGLQFDV---RDVGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATFA 319

Query: 110 NYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI-----KTCF 164
             GL  E+ ++F +M LEG      T  +V+  CS  G L+ G++ H   +     + C 
Sbjct: 320 QQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCC 379

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
             N  V T LV MY KC  + +A+ +FK     KN V+W  M+   +  G G +A    R
Sbjct: 380 LPNVVVETALVSMYGKCGTLEQAKAVFKAMTT-KNSVSWNAMLAACAHQGQGDEAAAFLR 438

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQS--ALIDMYAK 282
               EGVE +  +F S+L AC+     +  A  H  ++ S F+     ++   ++D+ A+
Sbjct: 439 AAACEGVELDSASFISVLIACSHSGMLEV-AYDHFQLMLSDFDLVPAAENYRCMVDLLAR 497

Query: 283 CGDLDSARRLLEYSEID-NEVSWNSMIVGFARQGFHKEALS 322
            G L  A  L+       + ++W +++ G   QG  + A S
Sbjct: 498 SGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAAS 538


>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
          Length = 659

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 236/630 (37%), Positives = 374/630 (59%), Gaps = 11/630 (1%)

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           LF  + D  +  +W ++I   +++G   +A+  F  MR   +   + +FP  + AC+++ 
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
               G Q H      G++++++V SALI MY+ CG L+ AR++ +     + VSW SMI 
Sbjct: 91  DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIR 150

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTY------PSVLNCFASNIDLNNAKSVHSLIV 363
           G+   G   +A+SLFK +   +   DD  +       SV++  +        +S+HS ++
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210

Query: 364 KTGFEGYKFVNNALIDMYAK--QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           K GF+    V N L+D YAK  +G +  A  +F+ + DKD +S+ S+++  A  G   EA
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270

Query: 422 LKYFSDMRISGICP-DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
            + F  +  + +   + + +S++L A +    L  G+ +H   ++ G    + V  S++ 
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           +Y KCG +  A + FD M  ++V +WTA+I G   +G   +AL+ +  M+  G +P+YIT
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390

Query: 541 FVGLLFACSHAGL-AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ 599
           FV +L ACSHAGL  E  RW F +M   +G++PG +HY CM+DLLGR+G L +A  L+ +
Sbjct: 391 FVSVLAACSHAGLHVEGWRW-FNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQR 449

Query: 600 MVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDA 659
           M  +PD+ +W +LL+ACR+H ++EL E +   LFEL+  N   Y+ LS++Y+ AG+W+D 
Sbjct: 450 MKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDV 509

Query: 660 ARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYV 719
            RVR +MK+RG+ K PG S +E N +VH+F+  D  HP R  IY  + E+   + EAGYV
Sbjct: 510 ERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYV 569

Query: 720 PDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYI 779
            + +   H+V+EE KE+ L  HSEKLA+AFG++    G+ + + KNLRVC DCH  +K I
Sbjct: 570 SNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLI 629

Query: 780 SAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           S +  R  ++RD+ RFHHFK G CSCGDYW
Sbjct: 630 SKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 222/437 (50%), Gaps = 13/437 (2%)

Query: 89  LFNETPFK-NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKG 147
           LFN    K + F+W+S+I   +  G   EA   F  M+     P++ +    ++ CS   
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90

Query: 148 LLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
            +  G+Q H  A    +  + FV + L+ MY+ C  + +A  +F   P  ++ V+WT+MI
Sbjct: 91  DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPK-RDIVSWTSMI 149

Query: 208 TGYSQNGYGFKAIECFRDMRVEGVESNQFTF------PSILTACAAVSARDFGAQVHGCI 261
            GY  NG    A+  F+D+ V+  + +   F       S+++AC+ V A+     +H  +
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209

Query: 262 LSSGFEANVYVQSALIDMYAKCGD--LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKE 319
           +  GF+  V V + L+D YAK G+  +  AR++ +     + VS+NS++  +A+ G   E
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269

Query: 320 ALSLFKKM-HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           A  +F+++   + +  +  T  +VL   + +  L   K +H  +++ G E    V  ++I
Sbjct: 270 AFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII 329

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
           DMY K G ++ A   F+ M++K+V SWT++I G   HG   +AL+ F  M  SG+ P+++
Sbjct: 330 DMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYI 389

Query: 439 VVSSILSACAELTV-LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
              S+L+AC+   + +E  +  +A+  + G    L     +V +  + G +  A  +   
Sbjct: 390 TFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQR 449

Query: 498 MHTR-DVITWTALIMGC 513
           M  + D I W++L+  C
Sbjct: 450 MKMKPDSIIWSSLLAAC 466



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 184/371 (49%), Gaps = 20/371 (5%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  + +I  Y+  G+L +A+K+F+E P ++  +W+S+I GY   G  ++A  LF  + 
Sbjct: 110 DIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLL 169

Query: 126 L-EGYRPSQYTLD-----NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYA 179
           + E        LD     +V+  CS        E  H + IK  FD    V   L+D YA
Sbjct: 170 VDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYA 229

Query: 180 KC--KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQF 236
           K     +  A  +F    D K+ V++ ++++ Y+Q+G   +A E FR + + + V  N  
Sbjct: 230 KGGEGGVAVARKIFDQIVD-KDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAI 288

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           T  ++L A +   A   G  +H  ++  G E +V V +++IDMY KCG +++AR+  +  
Sbjct: 289 TLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRM 348

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNA 355
           +  N  SW +MI G+   G   +AL LF  M    ++ +  T+ SVL  C  + + +   
Sbjct: 349 KNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGW 408

Query: 356 KSVHSLI----VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLIT 410
           +  +++     V+ G E Y      ++D+  + G L  A+ +   M+ K D I W+SL+ 
Sbjct: 409 RWFNAMKGRFGVEPGLEHY----GCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLA 464

Query: 411 GCAYHGSYEEA 421
            C  H + E A
Sbjct: 465 ACRIHKNVELA 475



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 7/180 (3%)

Query: 36  ASDLNRALVDFSNSGEIDEA----GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN 91
           A  L+  L+  S+SG +        Q+     + D     ++I  Y   GR+  A+K F+
Sbjct: 287 AITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFD 346

Query: 92  ETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQR 151
               KN  +W+++I GY  +G   +A ELF  M   G RP+  T  +VL  CS  GL   
Sbjct: 347 RMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVE 406

Query: 152 GEQFHGYAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
           G ++   A+K  F +   +     +VD+  +   + +A  L +      + + W++++  
Sbjct: 407 GWRWFN-AMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465


>gi|302821737|ref|XP_002992530.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
 gi|300139732|gb|EFJ06468.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
          Length = 849

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 256/751 (34%), Positives = 396/751 (52%), Gaps = 23/751 (3%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D    N ++ AY   G +++A+ +F+     N ++W+ L+  Y+  G      EL  QM 
Sbjct: 115 DRLLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMD 174

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC-FDLNAFVVTGLVDMYAKCKCI 184
           L G  P+  TL  V+   S  G      + H  A  TC    +  +VT L+DMYAKC  I
Sbjct: 175 LLGVWPNAVTLATVIGAVSELGDWDEARKIHARAAATCQLTYDVVLVTALIDMYAKCGDI 234

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
           F AE +F    + K+      MI+ Y Q GY   A+  F  ++  G++ NQ T+  +  A
Sbjct: 235 FHAEVVFDQARN-KDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRA 293

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           CA           H C + S    +V V +AL+ MY++CG L+ ARR+ +     N V+W
Sbjct: 294 CATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTW 353

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N MI G+A++G+  EAL L+  M A  ++ D+ T+ +VL   +    L   + +H  +V 
Sbjct: 354 NVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVD 413

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFN--LMQDKDVISWTSLITGCAYHGSYEEAL 422
            G++    V +ALI MY+  G+L  A  VF+  +     VISWT+++T    +G    AL
Sbjct: 414 AGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSAL 473

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
             F  M + G+  + V   S + AC+ +  L  G  +    + +G    + +  SL+ +Y
Sbjct: 474 ALFRKMDLEGVKANVVTFVSTIDACSSIGALVEGHAIFERVIVTGYLIDVVLGTSLINLY 533

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
            KCG ++ A  VF  +  ++++TW  ++   +QNG+   + +   +M   G +P+ +T +
Sbjct: 534 GKCGRLDYALEVFHHLSFKNIVTWNTILAASSQNGEETLSAELLQEMDLDGAQPNEMTLL 593

Query: 543 GLLFACSHAGLAENARWYFESMDKVYG--IKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
            +LF CSH GL   A  YF SM  VYG  + P  +HY C++DLLGRSG+L E +A +   
Sbjct: 594 NMLFGCSHNGLVAKAVSYFRSM--VYGHCLVPTSEHYGCLVDLLGRSGQLEEVEAFISSK 651

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAA 660
               D+ +W +LL +C +H D+E G RAA  +  L+P NA PYV LSNM++  G  +   
Sbjct: 652 PFSLDSVLWMSLLGSCVIHSDVERGLRAARRVLGLDPKNASPYVLLSNMFAAIGMLDAVK 711

Query: 661 RVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
            + KL   R ++KE   S++E N  VH F      H L   I +++ E    ++EAG+VP
Sbjct: 712 SLAKLAGERAMKKEQSRSYIEVNGVVHEFGVRAGLHRLGEKIGAQLREWSEEMEEAGFVP 771

Query: 721 DMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYIS 780
                LH+V          YH EKLA+AFG ++ P G P+ + KNLR+C  CH  +K+I 
Sbjct: 772 -----LHDVR--------GYHDEKLAIAFGAISSPPGVPLFVVKNLRMCVCCHGEIKHIC 818

Query: 781 AVYLRHIILRDSNRFHHFKA--GNCSCGDYW 809
            +  R I +R+ NR HHF+    +CSCGDYW
Sbjct: 819 KMTGRDISVREGNRVHHFRPMDASCSCGDYW 849



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 137/489 (28%), Positives = 244/489 (49%), Gaps = 23/489 (4%)

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
           F  +  ++  +V+ Y KC C+ +A  +F       N  +WT ++  Y+QNG+    +E  
Sbjct: 112 FSGDRLLLNCVVEAYGKCGCVKDARLVFSSIRH-PNVYSWTILLAAYAQNGHHKTVLELL 170

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG-CILSSGFEANVYVQSALIDMYAK 282
           R M + GV  N  T  +++ A + +   D   ++H     +     +V + +ALIDMYAK
Sbjct: 171 RQMDLLGVWPNAVTLATVIGAVSELGDWDEARKIHARAAATCQLTYDVVLVTALIDMYAK 230

Query: 283 CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
           CGD+  A  + + +   +    N+MI  + + G+  +A+S F ++    ++ +  TY  +
Sbjct: 231 CGDIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALL 290

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV 402
               A+N   ++A+  H   + +       VN AL+ MY++ G+L+ A  VF+ M  K+V
Sbjct: 291 FRACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNV 350

Query: 403 ISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAV 462
           ++W  +I G A  G  +EAL+ +  M  +G+ PD +   ++L +C+    L  G+ +H  
Sbjct: 351 VTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKH 410

Query: 463 FLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT--RDVITWTALIMGCAQNGKGK 520
            + +G  SSL+V ++L+ +Y+ CG + DA  VF    T    VI+WTA++    +NG+G+
Sbjct: 411 VVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGR 470

Query: 521 EALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFES-------MDKVYGIKPG 573
            AL  + +M   G K + +TFV  + ACS  G        FE        +D V G    
Sbjct: 471 SALALFRKMDLEGVKANVVTFVSTIDACSSIGALVEGHAIFERVIVTGYLIDVVLGTS-- 528

Query: 574 PDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLF 633
                 +I+L G+ G+L  A  +   +  + +   W  +L+A   +G+  L   +A  L 
Sbjct: 529 ------LINLYGKCGRLDYALEVFHHLSFK-NIVTWNTILAASSQNGEETL---SAELLQ 578

Query: 634 ELEPMNAMP 642
           E++   A P
Sbjct: 579 EMDLDGAQP 587



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 212/446 (47%), Gaps = 51/446 (11%)

Query: 23  ARYTHN--VGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           AR  H   + + ++P   +N ALV  +S  G +++A ++F++M  ++  TWN MIA YA 
Sbjct: 303 ARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQ 362

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
                                      GY++     EA +L+  M+  G  P + T  NV
Sbjct: 363 E--------------------------GYTD-----EALQLYVSMEAAGVEPDEITFVNV 391

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF-KMFPDGK 198
           L  CSL   L  G   H + +   +D +  V++ L+ MY+ C  + +A  +F K      
Sbjct: 392 LESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHS 451

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           + ++WT M+T  ++NG G  A+  FR M +EGV++N  TF S + AC+++ A   G  + 
Sbjct: 452 SVISWTAMLTALTRNGEGRSALALFRKMDLEGVKANVVTFVSTIDACSSIGALVEGHAIF 511

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
             ++ +G+  +V + ++LI++Y KCG LD A  +  +    N V+WN+++   ++ G   
Sbjct: 512 ERVIVTGYLIDVVLGTSLINLYGKCGRLDYALEVFHHLSFKNIVTWNTILAASSQNGEET 571

Query: 319 EALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
            +  L ++M     + ++ T  ++L  C  + +         S++              L
Sbjct: 572 LSAELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCL 631

Query: 378 IDMYAKQGNLD--CAFMV---FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           +D+  + G L+   AF+    F+L    D + W SL+  C  H   E  L+  +  R+ G
Sbjct: 632 VDLLGRSGQLEEVEAFISSKPFSL----DSVLWMSLLGSCVIHSDVERGLR--AARRVLG 685

Query: 433 ICPD----HVVVSSILSACAELTVLE 454
           + P     +V++S++ +A   L  ++
Sbjct: 686 LDPKNASPYVLLSNMFAAIGMLDAVK 711



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 180/362 (49%), Gaps = 5/362 (1%)

Query: 263 SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
           S  F  +  + + +++ Y KCG +  AR +       N  SW  ++  +A+ G HK  L 
Sbjct: 109 SKRFSGDRLLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLE 168

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV-NNALIDMY 381
           L ++M    +  +  T  +V+   +   D + A+ +H+    T    Y  V   ALIDMY
Sbjct: 169 LLRQMDLLGVWPNAVTLATVIGAVSELGDWDEARKIHARAAATCQLTYDVVLVTALIDMY 228

Query: 382 AKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVS 441
           AK G++  A +VF+  ++KD+    ++I+     G   +A+  F+ ++ SG+ P+ V  +
Sbjct: 229 AKCGDIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYA 288

Query: 442 SILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR 501
            +  ACA   V    +  H  F+ S     + V+ +LV +Y++CG + DA RVFD M  +
Sbjct: 289 LLFRACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGK 348

Query: 502 DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA-GLAENARWY 560
           +V+TW  +I G AQ G   EALQ Y  M A G +PD ITFV +L +CS A  LA     +
Sbjct: 349 NVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIH 408

Query: 561 FESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV-WKALLSACRVH 619
              +D   G        + +I +    G L +A  +  + V    + + W A+L+A   +
Sbjct: 409 KHVVDA--GYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRN 466

Query: 620 GD 621
           G+
Sbjct: 467 GE 468



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 151/302 (50%), Gaps = 13/302 (4%)

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG-FEGYKFVNNA 376
           K+ L+  ++ + +   +D   Y S+L       D+   K++ + I  +  F G + + N 
Sbjct: 65  KQRLASLEEQNQKSDFVDPAAYVSLLKQAG---DVTALKTIQAHISHSKRFSGDRLLLNC 121

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           +++ Y K G +  A +VF+ ++  +V SWT L+   A +G ++  L+    M + G+ P+
Sbjct: 122 VVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPN 181

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD----NSLVLVYAKCGCINDAN 492
            V +++++ A +EL   +  +++HA   ++     L+ D     +L+ +YAKCG I  A 
Sbjct: 182 AVTLATVIGAVSELGDWDEARKIHA---RAAATCQLTYDVVLVTALIDMYAKCGDIFHAE 238

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
            VFD    +D+    A+I    Q G   +A+  ++++   G +P+ +T+  L  AC+  G
Sbjct: 239 VVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNG 298

Query: 553 LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
           +  +AR        +  ++P       ++ +  R G L +A+ + D+M G+ +   W  +
Sbjct: 299 VYSDARVAHMCF-ILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGK-NVVTWNVM 356

Query: 613 LS 614
           ++
Sbjct: 357 IA 358


>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
 gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
          Length = 600

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 226/575 (39%), Positives = 355/575 (61%), Gaps = 2/575 (0%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           T+  +L  CA   A   G +VH C++  G+ ++  + + LI+MY KCG +  AR + +  
Sbjct: 26  TYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQI 85

Query: 297 EIDNE--VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
           +  N   +SWN +I  + + G  KEAL LFK M    +  +  T  + ++  AS      
Sbjct: 86  QEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEE 145

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
            + VH++ V    E    V  +L++M+ K  N+D A  VF+ +  K++++W +++   + 
Sbjct: 146 GRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQ 205

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
           +   ++A++ F  M + G+ PD V   +I+ ACA L     G+ VH     SG    +++
Sbjct: 206 NWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVAL 265

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
             +++  Y KCG +++A  +FDS+  ++ +TW+A++   AQNG   EA++ Y +M+  G 
Sbjct: 266 GTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGL 325

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAK 594
           + + ITF+GLLFACSHAG + +   YF SM + +G+ P  +HY  +IDLLGRSG+L  ++
Sbjct: 326 EVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSE 385

Query: 595 ALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAG 654
            L++ M  EPD++ W ALL ACR+HGD++ G R A  ++EL+P ++ PY+ LSN+YS+ G
Sbjct: 386 DLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSNLYSSTG 445

Query: 655 KWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIK 714
           + ++A R RK M+ RGI K+PG S +E   +VH F++  + HP    I+++I+ +   +K
Sbjct: 446 RMDEARRTRKAMRLRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRIHAEIERLKARVK 505

Query: 715 EAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHT 774
           EAGYV D+   L +VEEE KE  L YHSE+LA+AFGL++ P G  + I KNLRVC DCH 
Sbjct: 506 EAGYVADVRAVLRDVEEEEKEQLLWYHSERLAIAFGLISTPPGTALHIVKNLRVCFDCHA 565

Query: 775 AMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           A+K IS V  R I++RD+ RFHHF+ G CSCGDYW
Sbjct: 566 AVKAISKVVGRKIVVRDAIRFHHFENGACSCGDYW 600



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 187/366 (51%), Gaps = 13/366 (3%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKN--FFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D    N +I  Y   G + EA+ +F++   KN    +W+ +I  Y+  GL  EA  LF  
Sbjct: 58  DRLIANLLIEMYGKCGGIAEARSVFDQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKT 117

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M LEG   +Q TL N +  C+     + G   H  A+    + +  V T LV+M+ KCK 
Sbjct: 118 MDLEGVIANQVTLINAIDACASLPSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKN 177

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +  A  +F   P  KN V W  M+  YSQN    KAI+ FR M +EGV+ +  TF +I+ 
Sbjct: 178 VDAARAVFDSLPR-KNLVTWNNMVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIID 236

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           ACAA++A   G  VH  I +SG   +V + +A++  Y KCG LD+AR + +     N V+
Sbjct: 237 ACAALAAHTEGRMVHDDITASGIPMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVT 296

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLI 362
           W++++  +A+ G+  EA+ L+ +M    ++++  T+  +L  C  +   ++      S+I
Sbjct: 297 WSAILAAYAQNGYETEAIELYHEMVQGGLEVNGITFLGLLFACSHAGRSMDGVDYFVSMI 356

Query: 363 VKTG----FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGS 417
              G    FE Y  +N  LID+  + G L  +  + N M  + D  +W +L+  C  HG 
Sbjct: 357 RDFGVVPVFEHY--LN--LIDLLGRSGQLQLSEDLINSMPYEPDSSAWLALLGACRMHGD 412

Query: 418 YEEALK 423
            +   +
Sbjct: 413 VDRGAR 418



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/449 (24%), Positives = 218/449 (48%), Gaps = 13/449 (2%)

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
           S Y L  +L+ C+    L  G++ H   +K  +  +  +   L++MY KC  I EA  +F
Sbjct: 25  STYVL--LLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVF 82

Query: 192 KMFPD-GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
               +   + ++W  +I  Y+QNG G +A+  F+ M +EGV +NQ T  + + ACA++ +
Sbjct: 83  DQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPS 142

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            + G  VH   +    E++  V ++L++M+ KC ++D+AR + +     N V+WN+M+  
Sbjct: 143 EEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAV 202

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           +++    K+A+ +F+ M    ++ D  T+ ++++  A+       + VH  I  +G    
Sbjct: 203 YSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMD 262

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
             +  A++  Y K G LD A  +F+ +  K+ ++W++++   A +G   EA++ + +M  
Sbjct: 263 VALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQ 322

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN-SLVLVYAKCGCIN 489
            G+  + +    +L AC+       G       ++  G   +     +L+ +  + G + 
Sbjct: 323 GGLEVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQ 382

Query: 490 DANRVFDSM-HTRDVITWTALIMGCAQNG---KGKEALQFYDQMLARGTKPDYITFVGLL 545
            +  + +SM +  D   W AL+  C  +G   +G    +   ++    + P YI    L 
Sbjct: 383 LSEDLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGP-YILLSNLY 441

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGP 574
              S  G  + AR   ++M ++ GI   P
Sbjct: 442 ---SSTGRMDEARRTRKAM-RLRGITKQP 466



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 1/187 (0%)

Query: 60  EKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFE 119
           +K  + D     +++  +     +  A+ +F+  P KN  TW++++  YS      +A +
Sbjct: 155 DKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQ 214

Query: 120 LFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYA 179
           +F  M LEG +P   T   ++  C+       G   H     +   ++  + T ++  Y 
Sbjct: 215 VFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAVMHFYG 274

Query: 180 KCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFP 239
           KC  +  A  +F      KN V W+ ++  Y+QNGY  +AIE + +M   G+E N  TF 
Sbjct: 275 KCGRLDNARAIFDSLGK-KNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNGITFL 333

Query: 240 SILTACA 246
            +L AC+
Sbjct: 334 GLLFACS 340



 Score = 44.3 bits (103), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 19/207 (9%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK----NFFTW 101
           +   G +D A  +F+ +  ++  TW+ ++AAYA +G   EA +L++E        N  T+
Sbjct: 273 YGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNGITF 332

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQ------ 154
             L++  S+ G  ++  + F  M  + G  P      N++ L    G LQ  E       
Sbjct: 333 LGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLINSMP 392

Query: 155 FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
           +   +      L A  + G VD  A+      AE ++++ P+      +  +   YS  G
Sbjct: 393 YEPDSSAWLALLGACRMHGDVDRGARI-----AELIYELDPEDSG--PYILLSNLYSSTG 445

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSI 241
              +A    + MR+ G+ + Q    SI
Sbjct: 446 RMDEARRTRKAMRLRGI-TKQPGLSSI 471


>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
          Length = 694

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 252/662 (38%), Positives = 381/662 (57%), Gaps = 5/662 (0%)

Query: 152 GEQFHGYAIKTCFD-LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
           G   H  A++     L+ F+   LV++Y+K      A       P     V++T  I+G 
Sbjct: 34  GRAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAALASDPH-PTVVSYTAFISGA 92

Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD-FGAQVHGCILSSGF-EA 268
           +Q+G    A+  F  M   G+  N FTFPS   A A+   R   G Q+H   +  G+   
Sbjct: 93  AQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPV 152

Query: 269 NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH 328
           + +V  A +DMY K G L  AR L       N V+WN+++      G   E +  +  + 
Sbjct: 153 DPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLR 212

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD 388
                 +  +  +  N  A  + L+  +  H  +VK GFE    V N+++D Y K     
Sbjct: 213 EAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAG 272

Query: 389 CAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
            A  VF+ M  ++ +SW S++   A +G+ EEA   +   R SG  P   +VSS L+ CA
Sbjct: 273 KARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCA 332

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
            L  L  G+ +HAV ++S   +++ V ++LV +Y KCGC+ DA ++F     R+++TW A
Sbjct: 333 GLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNA 392

Query: 509 LIMGCAQNGKGKEALQFYDQMLARG-TKPDYITFVGLLFACSHAGLAENARWYFESMDKV 567
           +I G A  G  + AL  +D M+  G T P+YIT V ++ +CS  GL ++    FE+M + 
Sbjct: 393 MIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRER 452

Query: 568 YGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGER 627
           +GI+P  +HYAC++DLLGR+G   +A  ++  M   P  +VW ALL AC++HG  ELG  
Sbjct: 453 FGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRI 512

Query: 628 AANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVH 687
           AA  LFEL+P ++  +V LSNM+++AG+W +A  +RK MK+ GI+K+PGCSWV   + VH
Sbjct: 513 AAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVH 572

Query: 688 IFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAV 747
           +F ++D  H +  +I + + ++   ++ AGY+PD  ++L+++EEE KE  +  HSEKLA+
Sbjct: 573 VFRAKDTKHEMYNEIQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLAL 632

Query: 748 AFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGD 807
           AFGL+ +P G PIRI KNLR+C DCH A K+IS +  R II+RD+NRFHHFK   CSCGD
Sbjct: 633 AFGLICIPPGVPIRIMKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGD 692

Query: 808 YW 809
           YW
Sbjct: 693 YW 694



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 213/434 (49%), Gaps = 24/434 (5%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F     +  Y  +GRL+ A+ LF E P +N   W++++      G  +E  E ++ ++
Sbjct: 153 DPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLR 212

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G  P+  +       C+    L  GEQFHG+ +K  F+++  V+  +VD Y KC+C  
Sbjct: 213 EAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAG 272

Query: 186 EAEYLFKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
           +A  +F    DG   +N V+W +M+  Y+QNG   +A   +   R  G E   F   S L
Sbjct: 273 KARAVF----DGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSAL 328

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           T CA +     G  +H   + S  +AN++V SAL+DMY KCG ++ A ++   +   N V
Sbjct: 329 TTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLV 388

Query: 303 SWNSMIVGFARQGFHKEALSLFKKM-HARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHS 360
           +WN+MI G+A  G  + AL +F  M  + +   +  T  +V+ +C    +  +  +   +
Sbjct: 389 TWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFET 448

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYE 419
           +  + G E        ++D+  + G  + A+ V   M  +  IS W +L+  C  HG  E
Sbjct: 449 MRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTE 508

Query: 420 ----EALKYFS-DMRISGICPDHVVVSSILSAC---AELTVLEFGQQVHAVFLKS-GGCS 470
                A K F  D + SG   +HV++S++ ++    AE T  +  +++  V +K   GCS
Sbjct: 509 LGRIAAEKLFELDPQDSG---NHVLLSNMFASAGRWAEAT--DIRKEMKNVGIKKDPGCS 563

Query: 471 SLSVDNSLVLVYAK 484
            ++  N + +  AK
Sbjct: 564 WVTWKNVVHVFRAK 577



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 14/203 (6%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNET-----PF 95
           ALVD +   G +++A Q+F +   R+  TWN MI  YA+ G  + A  +F++        
Sbjct: 361 ALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETA 420

Query: 96  KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRG-E 153
            N+ T  ++I   S  GL  + +ELF  M+   G  P       V+ L    G+ ++  E
Sbjct: 421 PNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYE 480

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKCKC-IFEAEYLFKMFP-DGKNHVAWTTMITGYS 211
              G  ++    +    + G   M+ K +     AE LF++ P D  NHV  + M   ++
Sbjct: 481 VIQGMPMRPSISVWG-ALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNM---FA 536

Query: 212 QNGYGFKAIECFRDMRVEGVESN 234
             G   +A +  ++M+  G++ +
Sbjct: 537 SAGRWAEATDIRKEMKNVGIKKD 559



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D + F  + ++  Y   G + +A+++F ETP +N  TW+++I GY++ G    A  +F  
Sbjct: 353 DANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDD 412

Query: 124 MQLEG-YRPSQYTLDNVLRLCSLKGLLQRGEQF 155
           M   G   P+  TL NV+  CS  GL + G + 
Sbjct: 413 MIRSGETAPNYITLVNVITSCSRGGLTKDGYEL 445


>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 939

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 230/668 (34%), Positives = 383/668 (57%), Gaps = 1/668 (0%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           +D  T + ++  YA   RL ++ K+F+E P KN+  WS++I G       I   ELF +M
Sbjct: 209 KDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEM 268

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
           Q  G   SQ    +V R C+    L+ G Q H +A+K  F  +  V T  +DMYAKC  +
Sbjct: 269 QKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSL 328

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            +A+ +F   P       +  +I G  +N  GF+A++ F+ +   G+  N+ +     +A
Sbjct: 329 ADAQRIFNSLPKHSLQ-CYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSA 387

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           CA++     G Q+H   + S   +N+ V ++++DMY KC  L  A  + +  E  + VSW
Sbjct: 388 CASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSW 447

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N++I    + G  +E L+LF  M    ++ D FTY SVL   +S   LN+   +H+ I+K
Sbjct: 448 NAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIK 507

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
           +G     FV  ALIDMY K G ++ A  + + ++ + ++SW ++I G       E+A  +
Sbjct: 508 SGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSF 567

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           F +M    + PD+   + +L ACA L  +  G+Q+H   +K    S + + ++LV +Y+K
Sbjct: 568 FYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSK 627

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG + D+  VF+    +D +TW A+I G AQ+G G+EAL ++++M     +P++ TFV +
Sbjct: 628 CGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSI 687

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L AC+H G  +    YF +M   YG++P  +HY+CMID++GRSG++ EA  L+ +M  E 
Sbjct: 688 LRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEA 747

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
           DA +W+ LLS C++HG++E+ E+A N + +LEP ++   + LSN+Y+ AG W   + +RK
Sbjct: 748 DAVIWRTLLSICKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKVSEMRK 807

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
           +M+   ++KEPGCSW+E   +VH F+  ++ HP   +IY  +  ++  +K  GY+PD++F
Sbjct: 808 MMRYNKLKKEPGCSWIEVKDEVHAFLVGNKTHPRYEEIYKILSVLLDEMKWIGYIPDIDF 867

Query: 725 ALHNVEEE 732
            +    EE
Sbjct: 868 LIDEESEE 875



 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 173/597 (28%), Positives = 300/597 (50%), Gaps = 17/597 (2%)

Query: 52  IDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNY 111
           ++ A ++FEKMS RD  ++NTMI+ YA++G +  A + F +TP ++  +W+S++ G+   
Sbjct: 94  LNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQN 153

Query: 112 GLDIEAFELFWQM-QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV 170
           G   ++ ++F  M + E     Q T   VL+ CS+      G Q HG  ++  F  +   
Sbjct: 154 GECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVT 213

Query: 171 VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG 230
            + L+DMYAKCK + ++  +F   P  KN V W+ +I G  QN      +E F++M+  G
Sbjct: 214 GSALLDMYAKCKRLDDSLKIFSEIP-VKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVG 272

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           +  +Q  + S+  +CA +SA   G Q+H   L   F +++ V +A +DMYAKCG L  A+
Sbjct: 273 IGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQ 332

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
           R+       +   +N++IVG  R     EAL  F+ +    +  ++ +     +  AS  
Sbjct: 333 RIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIK 392

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
              + + +HSL VK+       V N+++DMY K   L  A  +F+ M+ +D +SW ++I 
Sbjct: 393 GDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIA 452

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
               +G+ EE L  F+ M    + PD     S+L AC+    L  G ++H   +KSG   
Sbjct: 453 AHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGL 512

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
              V  +L+ +Y KCG I +A ++ D +  + +++W A+I G       ++A  F+ +ML
Sbjct: 513 DSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEML 572

Query: 531 ARGTKPDYITFVGLLFACSH---AGLAENARWYFESMDKVYGIKPGPDHY--ACMIDLLG 585
               KPD  T+  +L AC++    GL +          ++  ++   D Y  + ++D+  
Sbjct: 573 KMSVKPDNFTYAIVLDACANLASVGLGKQIH------GQIIKLELHSDVYITSTLVDMYS 626

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           + G + +  AL+ +     D   W A++     HG   LGE A      ++  N  P
Sbjct: 627 KCGNM-QDSALVFEKAPNKDFVTWNAMICGYAQHG---LGEEALGYFERMQLENVRP 679



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 179/662 (27%), Positives = 297/662 (44%), Gaps = 98/662 (14%)

Query: 74  IAAYANSGRLREAKKLFNET-PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +A + +S RL  ++ L+N+T     F T S+L    +     I  F              
Sbjct: 1   MAKHTSSLRLIASRILYNKTLRIFTFCTISTLQQNQTKLPTKIRTF-------------- 46

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
                ++++ CS    L+ G+Q H   I + F  + ++   L+ MY +C  +    Y +K
Sbjct: 47  ----SHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHL---NYAYK 99

Query: 193 MFPD---------------------------------GKNHVAWTTMITGYSQNGYGFKA 219
           +F                                    ++ V+W +M++G+ QNG   K+
Sbjct: 100 VFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKS 159

Query: 220 IECFRDM-RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID 278
           I+ F DM R E V  +Q TF  +L AC+ +     G QVHG I+  GF  +V   SAL+D
Sbjct: 160 IDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLD 219

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
           MYAKC  LD + ++     + N V W+++I G  +   H   L LFK+M    I +    
Sbjct: 220 MYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSI 279

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
           Y SV    A    L     +H+  +K  F     V  A +DMYAK G+L  A  +FN + 
Sbjct: 280 YASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLP 339

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
              +  + ++I GC  +    EAL++F  +  SG+  + + +S   SACA +     G+Q
Sbjct: 340 KHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQ 399

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK 518
           +H++ +KS   S++ V NS++ +Y KC  +++A  +FD M  RD ++W A+I    QNG 
Sbjct: 400 LHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGN 459

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY- 577
            +E L  +  ML    +PD  T+  +L ACS      +     E  +++     G D + 
Sbjct: 460 EEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSG---MEIHNRIIKSGLGLDSFV 516

Query: 578 -ACMIDLLGRSGKLIEAKALLD----------------------------------QMVG 602
              +ID+  + G + EAK + D                                  +M  
Sbjct: 517 GGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSV 576

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYV--QLSNMYSTAGKWEDAA 660
           +PD   +  +L AC     + LG++    + +LE +++  Y+   L +MYS  G  +D+A
Sbjct: 577 KPDNFTYAIVLDACANLASVGLGKQIHGQIIKLE-LHSDVYITSTLVDMYSKCGNMQDSA 635

Query: 661 RV 662
            V
Sbjct: 636 LV 637



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 84/155 (54%), Gaps = 3/155 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           GQ+ +     D +  +T++  Y+  G ++++  +F + P K+F TW+++I GY+ +GL  
Sbjct: 604 GQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGE 663

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV--VTG 173
           EA   F +MQLE  RP+  T  ++LR C+  G + +G  +   A+ T + L   +   + 
Sbjct: 664 EALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFN-AMLTEYGLEPQIEHYSC 722

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
           ++D+  +   I EA  L +  P   + V W T+++
Sbjct: 723 MIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLS 757


>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 741

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 236/659 (35%), Positives = 365/659 (55%), Gaps = 36/659 (5%)

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A+ LF   P   +    +T+I+ ++  G   +AI  +  +R  G++ +   F ++  AC
Sbjct: 84  RAQQLFDNIPQ-PDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKAC 142

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
            A        +VH   +  G  ++ ++ +ALI  Y KC  ++ ARR+ +   + + VSW 
Sbjct: 143 GASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWT 202

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           SM   +   G  +  L++F +M    +K +  T  S+L   +   DL + +++H   V+ 
Sbjct: 203 SMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRH 262

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT--------------- 410
           G     FV +AL+ +YA+  ++  A +VF+LM  +DV+SW  ++T               
Sbjct: 263 GMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALF 322

Query: 411 --------------------GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
                               GC  +G  E+A++    M+  G  P+ + +SS L AC+ L
Sbjct: 323 SQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSIL 382

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
             L  G++VH    +      L+   +LV +YAKCG +N +  VFD +  +DV+ W  +I
Sbjct: 383 ESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMI 442

Query: 511 MGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGI 570
           +  A +G G+E L  ++ ML  G KP+ +TF G+L  CSH+ L E     F SM + + +
Sbjct: 443 IANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLV 502

Query: 571 KPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAAN 630
           +P  +HYACM+D+  R+G+L EA   + +M  EP A+ W ALL ACRV+ ++EL + +AN
Sbjct: 503 EPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKISAN 562

Query: 631 NLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFI 690
            LFE+EP N   YV L N+  TA  W +A+  R LMK RGI K PGCSW++   +VH F+
Sbjct: 563 KLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQVGDRVHTFV 622

Query: 691 SEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFG 750
             D+ +     IY+ +DE+   +K AGY PD ++ L ++++E K   L  HSEKLAVAFG
Sbjct: 623 VGDKNNMESDKIYNFLDELGEKMKSAGYKPDTDYVLQDIDQEEKAESLCSHSEKLAVAFG 682

Query: 751 LLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +L L   + IR+FKNLR+CGDCH A+KY+S V    II+RDS RFHHF+ GNCSC D W
Sbjct: 683 ILNLNGQSSIRVFKNLRICGDCHNAIKYVSKVVGVTIIVRDSLRFHHFRNGNCSCQDLW 741



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 219/482 (45%), Gaps = 46/482 (9%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           ++ A  N G  R A++LF+  P  +  T S+LI  ++  GL  EA  L+  ++  G +P 
Sbjct: 72  LLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPH 131

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
                 V + C   G   R ++ H  AI+     +AF+   L+  Y KCKC+  A  +F 
Sbjct: 132 NSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFD 191

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
                K+ V+WT+M + Y   G     +  F +M   GV+ N  T  SIL AC+ +    
Sbjct: 192 DLVV-KDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLK 250

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G  +HG  +  G   NV+V SAL+ +YA+C  +  AR + +     + VSWN ++  + 
Sbjct: 251 SGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYF 310

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA----------------- 355
               + + L+LF +M ++ ++ D+ T+ +V+     N     A                 
Sbjct: 311 TNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQI 370

Query: 356 ------------------KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
                             K VH  + +    G      AL+ MYAK G+L+ +  VF+++
Sbjct: 371 TISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMI 430

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
             KDV++W ++I   A HG+  E L  F  M  SGI P+ V  + +LS C+   ++E G 
Sbjct: 431 CRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGL 490

Query: 458 QVHAVFLKSGGCSSLSVDNS-----LVLVYAKCGCINDANRVFDSMHTRDVIT-WTALIM 511
           Q+      S G   L   ++     +V V+++ G +++A      M      + W AL+ 
Sbjct: 491 QI----FNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLG 546

Query: 512 GC 513
            C
Sbjct: 547 AC 548



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 208/471 (44%), Gaps = 76/471 (16%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N +I AY     +  A+++F++   K+  +W+S+   Y N GL      +F +M 
Sbjct: 166 DAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMG 225

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G +P+  TL ++L  CS    L+ G   HG+A++     N FV + LV +YA+C  + 
Sbjct: 226 WNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVK 285

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGY----------------------------------- 210
           +A  +F + P  ++ V+W  ++T Y                                   
Sbjct: 286 QARLVFDLMPH-RDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGC 344

Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV 270
            +NG   KA+E  R M+  G + NQ T  S L AC+ + +   G +VH  +       ++
Sbjct: 345 MENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDL 404

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
              +AL+ MYAKCGDL+ +R + +     + V+WN+MI+  A  G  +E L LF+ M   
Sbjct: 405 TTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQS 464

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN------------ALI 378
            IK +  T+  VL           +   HS +V+ G + +  +               ++
Sbjct: 465 GIKPNSVTFTGVL-----------SGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMV 513

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           D++++ G L  A+     M  +   S W +L+  C  + + E  L   S  ++  I P++
Sbjct: 514 DVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVE--LAKISANKLFEIEPNN 571

Query: 438 ----------VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSL 478
                     +V + + S  +E  +L   + +     K+ GCS L V + +
Sbjct: 572 PGNYVSLFNILVTAKLWSEASEARILMKERGI----TKTPGCSWLQVGDRV 618



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 186/407 (45%), Gaps = 14/407 (3%)

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANV--YVQSALIDMYAKCGDLDSARRLL 293
           F  P   +   +  +     Q+    ++     N+  ++   L+      GD   A++L 
Sbjct: 30  FVLPPFFSITHSTQSSSIWKQLTSTKVAPSVPTNIPSHLGLRLLKAALNVGDFRRAQQLF 89

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
           +     +  + +++I  F  +G   EA+ L+  + AR IK  +  + +V     ++ D +
Sbjct: 90  DNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKACGASGDAS 149

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
             K VH   ++ G     F+ NALI  Y K   ++ A  VF+ +  KDV+SWTS+ +   
Sbjct: 150 RVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYV 209

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
             G     L  F +M  +G+ P+ V +SSIL AC+EL  L+ G+ +H   ++ G   ++ 
Sbjct: 210 NCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVF 269

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
           V ++LV +YA+C  +  A  VFD M  RDV++W  ++     N +  + L  + QM ++G
Sbjct: 270 VCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKG 329

Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY-----ACMIDLLGRSG 588
            + D  T+  ++  C   G  E A      M  + G KP          AC I    R G
Sbjct: 330 VEADEATWNAVIGGCMENGQTEKAVEMLRKMQNL-GFKPNQITISSFLPACSILESLRMG 388

Query: 589 KLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
           K +        ++G  D T   AL+      GDL L    + N+F++
Sbjct: 389 KEVHCYVFRHWLIG--DLTTMTALVYMYAKCGDLNL----SRNVFDM 429



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 130/269 (48%), Gaps = 10/269 (3%)

Query: 52  IDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF----FTWSSLIYG 107
           + +A  +F+ M  RD  +WN ++ AY  +    +   LF++   K       TW+++I G
Sbjct: 284 VKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGG 343

Query: 108 YSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLN 167
               G   +A E+  +MQ  G++P+Q T+ + L  CS+   L+ G++ H Y  +     +
Sbjct: 344 CMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGD 403

Query: 168 AFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR 227
              +T LV MYAKC  +  +  +F M    K+ VAW TMI   + +G G + +  F  M 
Sbjct: 404 LTTMTALVYMYAKCGDLNLSRNVFDMICR-KDVVAWNTMIIANAMHGNGREVLLLFESML 462

Query: 228 VEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF---EANVYVQSALIDMYAKCG 284
             G++ N  TF  +L+ C+     + G Q+   +        +AN Y  + ++D++++ G
Sbjct: 463 QSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHY--ACMVDVFSRAG 520

Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
            L  A   ++   ++   S    ++G  R
Sbjct: 521 RLHEAYEFIQRMPMEPTASAWGALLGACR 549


>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
 gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
          Length = 548

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 230/549 (41%), Positives = 341/549 (62%), Gaps = 1/549 (0%)

Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEA 320
           ++ +GFE + Y+++ ++ M+ KCG +  ARRL +     N VSWN++I G    G   EA
Sbjct: 1   MIDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEA 60

Query: 321 LSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDM 380
             LF  M         FT+  ++   A    ++  + +H+  +K G     FV+ ALIDM
Sbjct: 61  FRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDM 120

Query: 381 YAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVV 440
           Y+K G+++ A  VF  M +K  + W ++I G A HG  EEAL  + +MR SG+  DH   
Sbjct: 121 YSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTF 180

Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT 500
           S I+  CA L  +E  +Q HA  ++ G  S +  + +LV  Y+K G I DA  VFD M +
Sbjct: 181 SMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMAS 240

Query: 501 RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWY 560
           ++VI+W ALI G   +G+G EA++ ++QM+     P++ITF+ +L ACSH+GL+E     
Sbjct: 241 KNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEI 300

Query: 561 FESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
           F+SM +   IKP   HYACMI+L+GR G L EA AL+     +P A +W ALL+ACRV+ 
Sbjct: 301 FQSMGRDNRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTACRVNE 360

Query: 621 DLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWV 680
           + ELG+ AA  L+ +EP     Y+ L N+Y++AG  ++AA V   +K +G+R  P CSW+
Sbjct: 361 NFELGKFAAEKLYGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRKGLRMRPVCSWI 420

Query: 681 ETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAY 740
           E   + H+F+S D  HP R +IY K+D++ML I + GYVP+    L +V+E+ + + L Y
Sbjct: 421 EVKRRPHVFLSGDNRHPQRKEIYQKVDKLMLEISKYGYVPNQKTLLPDVDEQEERVRL-Y 479

Query: 741 HSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKA 800
           HSEKLA+AFGL++ P  AP++I +  R+CGDCH A+K I+ V  R I++RD+ RFHHFK 
Sbjct: 480 HSEKLAIAFGLISTPYWAPLQIVQGHRICGDCHEAIKLIARVTGREIVIRDAGRFHHFKH 539

Query: 801 GNCSCGDYW 809
           G+CSC DYW
Sbjct: 540 GHCSCEDYW 548



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 210/437 (48%), Gaps = 42/437 (9%)

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           I   F+ + ++   ++ M+ KC  + +A  LF   P+ +N V+W T+I+G    G   +A
Sbjct: 2   IDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPE-RNLVSWNTIISGLVDVGDFMEA 60

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
              F +M  E  ++  FTF  ++ A A +     G Q+H C L  G   +++V  ALIDM
Sbjct: 61  FRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDM 120

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           Y+KCG ++ AR + E       V WN++I G+A  G+ +EAL ++ +M    +K+D FT+
Sbjct: 121 YSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTF 180

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
             ++   A    + +AK  H+ +++ GF      N AL+D Y+K G ++ A  VF+ M  
Sbjct: 181 SMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMAS 240

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           K+VISW +LI G   HG   EA++ F  M    + P+H+   ++LSAC+   + E G + 
Sbjct: 241 KNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWE- 299

Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKG 519
                                             +F SM   + I   A+   C     G
Sbjct: 300 ----------------------------------IFQSMGRDNRIKPRAMHYACMIELMG 325

Query: 520 KEALQFYDQMLARGT--KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP-DH 576
           +E L      L RG   KP    +  LL AC    + EN      + +K+YG++P   ++
Sbjct: 326 REGLLDEALALIRGAPFKPTANMWAALLTACR---VNENFELGKFAAEKLYGMEPDKLNN 382

Query: 577 YACMIDLLGRSGKLIEA 593
           Y  ++++   +G L EA
Sbjct: 383 YIVLLNIYNSAGNLKEA 399



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 203/391 (51%), Gaps = 9/391 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +  N ++  +   G + +A++LF+E P +N  +W+++I G  + G  +EAF LF  M 
Sbjct: 9   DQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLFLNMW 68

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            E      +T   ++R  +   L+  G Q H   +K     + FV   L+DMY+KC  I 
Sbjct: 69  EEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIE 128

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A ++F+  P+ K  V W T+I GY+ +GY  +A++ + +MR  GV+ + FTF  I+  C
Sbjct: 129 DARFVFEEMPE-KTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIVRIC 187

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A +++ +   Q H  ++  GF +++   +AL+D Y+K G ++ AR + +     N +SWN
Sbjct: 188 ARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMASKNVISWN 247

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVK 364
           ++I G+   G   EA+ LF++M    +  +  T+ +VL+ C  S +     +   S+   
Sbjct: 248 ALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEIFQSMGRD 307

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEALK 423
              +        +I++  ++G LD A  +      K   + W +L+T C  + ++E  L 
Sbjct: 308 NRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTACRVNENFE--LG 365

Query: 424 YFSDMRISGICPD----HVVVSSILSACAEL 450
            F+  ++ G+ PD    ++V+ +I ++   L
Sbjct: 366 KFAAEKLYGMEPDKLNNYIVLLNIYNSAGNL 396



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 121/254 (47%), Gaps = 34/254 (13%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           AL+D +S  G I++A  +FE+M ++    WNT+IA YA                      
Sbjct: 116 ALIDMYSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYA---------------------- 153

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
               ++GYS      EA +++++M+  G +   +T   ++R+C+    ++  +Q H   I
Sbjct: 154 ----LHGYSE-----EALDMYYEMRDSGVKMDHFTFSMIVRICARLASVEHAKQAHAALI 204

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAI 220
           +  F  +    T LVD Y+K   I +A ++F      KN ++W  +I GY  +G G +A+
Sbjct: 205 RHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMA-SKNVISWNALIGGYGNHGRGSEAV 263

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI-LSSGFEANVYVQSALIDM 279
           E F  M  E +  N  TF ++L+AC+     + G ++   +   +  +      + +I++
Sbjct: 264 ELFEQMIQERMNPNHITFLAVLSACSHSGLSERGWEIFQSMGRDNRIKPRAMHYACMIEL 323

Query: 280 YAKCGDLDSARRLL 293
             + G LD A  L+
Sbjct: 324 MGREGLLDEALALI 337



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 96/201 (47%), Gaps = 13/201 (6%)

Query: 40  NRALVDF-SNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF----NETP 94
           N ALVDF S  G I++A  +F+KM+ ++  +WN +I  Y N GR  EA +LF     E  
Sbjct: 215 NTALVDFYSKWGRIEDARHVFDKMASKNVISWNALIGGYGNHGRGSEAVELFEQMIQERM 274

Query: 95  FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVLRLCSLKGLLQRG- 152
             N  T+ +++   S+ GL    +E+F  M  +   +P       ++ L   +GLL    
Sbjct: 275 NPNHITFLAVLSACSHSGLSERGWEIFQSMGRDNRIKPRAMHYACMIELMGREGLLDEAL 334

Query: 153 EQFHGYAIKTCFDLNAFVVTG--LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
               G   K   ++ A ++T   + + +   K  F AE L+ M PD  N+  +  ++  Y
Sbjct: 335 ALIRGAPFKPTANMWAALLTACRVNENFELGK--FAAEKLYGMEPDKLNN--YIVLLNIY 390

Query: 211 SQNGYGFKAIECFRDMRVEGV 231
           +  G   +A +    ++ +G+
Sbjct: 391 NSAGNLKEAADVVHTLKRKGL 411


>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Brachypodium distachyon]
          Length = 642

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 237/598 (39%), Positives = 346/598 (57%), Gaps = 12/598 (2%)

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI------LSSGFEANVYV 272
           A+    D+   GV ++  +   ++  C        G  +H  +             +++V
Sbjct: 50  ALALLPDIAAAGVRADPVSLCRLIKLCVRHGTVGDGRAIHRHVSLCAHGGGGATHGSLFV 109

Query: 273 QSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR-QGFHKEALSLFKKMHARD 331
            ++L+ MYAK G LD A  L       N VSW +++   A   G  KEAL    +M    
Sbjct: 110 SNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRRDG 169

Query: 332 IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
           +  + +T+ SVL    +   L    ++H+ I+K G +   FV ++LID Y K G+LD   
Sbjct: 170 VAANSYTFSSVLGACGTPGVL---AAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGR 226

Query: 392 MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELT 451
            VF+ M   D++ W S+I G A  G    A++ F  M+ SG   +   ++S+L AC  + 
Sbjct: 227 GVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGMV 286

Query: 452 VLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIM 511
           +LE G+QVHA  LK      L + N+L+ +Y KCGC+ DA+ +F  MH RDVI+W+ +I 
Sbjct: 287 MLEVGRQVHAHVLKYD--RDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMIS 344

Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIK 571
           G AQNG+  EAL+ +D M A G  P+ IT VG+LFACSHAGL E+   YF SMDK++GI+
Sbjct: 345 GLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGIQ 404

Query: 572 PGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANN 631
           P  +H  CM+DLLGR+GKL EA   + +M  EPD+ +W+ LL ACR+H +  L   AA  
Sbjct: 405 PEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMHKNATLASYAATE 464

Query: 632 LFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFIS 691
           + +LEP +    + LSN+Y+   +W +A +  K M+ +G++KEPG SW+E    VH+FI+
Sbjct: 465 ILKLEPEDQGARILLSNIYADLRQWSNAEKSWKTMRDQGVKKEPGRSWIELGKLVHVFIA 524

Query: 692 EDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGL 751
            +  HP    I  +++ ++   K+ GYVP   F L ++  E KE  L YHSEKLA+AFG 
Sbjct: 525 GELSHPCSDRIVQELNRLIRRAKDLGYVPQTEFVLQDLGTEQKEDLLKYHSEKLAIAFGT 584

Query: 752 LTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +   +G P+RI KNLR+CGDCH   K +S    + II+RD  RFHHF+ G CSCGDYW
Sbjct: 585 MNSMEGKPVRIMKNLRICGDCHAFAKLVSKTEGKAIIIRDPVRFHHFQHGVCSCGDYW 642



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 169/351 (48%), Gaps = 9/351 (2%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNY-GLDIEAFELFWQMQL 126
           F  N++++ YA  G L +A +LF   P +N  +W++++   +N  G   EA     +M+ 
Sbjct: 108 FVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRR 167

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
           +G   + YT  +VL  C   G+L      H   IK   D + FV + L+D Y K   +  
Sbjct: 168 DGVAANSYTFSSVLGACGTPGVLA---AMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDS 224

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
              +F       + V W ++I G++Q+G G  A+E F  M+  G  +NQ T  S+L AC 
Sbjct: 225 GRGVFDEMVTC-DLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACT 283

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            +   + G QVH  +L   ++ ++ + +AL+DMY KCG L  A  L       + +SW++
Sbjct: 284 GMVMLEVGRQVHAHVLK--YDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWST 341

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKT 365
           MI G A+ G   EAL +F  M A     ++ T   VL  C  + +  +      S+    
Sbjct: 342 MISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLF 401

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYH 415
           G +  +   N ++D+  + G LD A      M+ + D + W +L+  C  H
Sbjct: 402 GIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMH 452



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 135/259 (52%), Gaps = 8/259 (3%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D F  +++I AY   G L   + +F+E    +   W+S+I G++  G  + A ELF +
Sbjct: 203 DSDVFVRSSLIDAYMKLGDLDSGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMR 262

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+  G+  +Q TL +VLR C+   +L+ G Q H + +K  +D +  +   L+DMY KC C
Sbjct: 263 MKESGFLANQGTLTSVLRACTGMVMLEVGRQVHAHVLK--YDRDLILHNALLDMYCKCGC 320

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A+ LF    D ++ ++W+TMI+G +QNG   +A++ F  M+ EG   N  T   +L 
Sbjct: 321 LLDADALFSRMHD-RDVISWSTMISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLF 379

Query: 244 ACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NE 301
           AC+     + G      +    G +      + ++D+  + G LD A + +   + + + 
Sbjct: 380 ACSHAGLVEDGWHYFRSMDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDS 439

Query: 302 VSWNSMIVGFARQGFHKEA 320
           V W +++ G  R   HK A
Sbjct: 440 VIWRTLL-GACR--MHKNA 455



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 6/125 (4%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN----ET 93
           L+ AL+D +   G + +A  LF +M DRD  +W+TMI+  A +GR  EA K+F+    E 
Sbjct: 307 LHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMISGLAQNGRSVEALKVFDLMKAEG 366

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
           P  N  T   +++  S+ GL  + +  F  M +L G +P +   + ++ L    G L   
Sbjct: 367 PTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLFGIQPEREHCNCMVDLLGRAGKLDEA 426

Query: 153 EQFHG 157
            +F G
Sbjct: 427 MKFIG 431


>gi|302816964|ref|XP_002990159.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
 gi|300142014|gb|EFJ08719.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
          Length = 849

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 256/751 (34%), Positives = 396/751 (52%), Gaps = 23/751 (3%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D    N ++ AY   G +++A+ +F+     N ++W+ L+  Y+  G      EL  QM 
Sbjct: 115 DRLLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMD 174

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC-FDLNAFVVTGLVDMYAKCKCI 184
           L G  P+  TL  V+   S  G      + H  A  TC    +  +VT L+DMYAKC  I
Sbjct: 175 LLGVWPNAVTLATVIGAVSELGNWDEARKIHARAAATCQLTYDVVLVTALIDMYAKCGDI 234

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
           F AE +F    + K+      MI+ Y Q GY   A+  F  ++  G++ NQ T+  +  A
Sbjct: 235 FHAEVVFDQARN-KDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRA 293

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           CA           H C + S    +V V +AL+ MY++CG L+ ARR+ +     N V+W
Sbjct: 294 CATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTW 353

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N MI G+A++G+  EAL L+  M A  ++ D+ T+ +VL   +    L   + +H  +V 
Sbjct: 354 NVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVD 413

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFN--LMQDKDVISWTSLITGCAYHGSYEEAL 422
            G++    V +ALI MY+  G+L  A  VF+  +     VISWT+++T    +G    AL
Sbjct: 414 AGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSAL 473

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
             F  M + G+  + V   S + AC+ +  L  G  +    + +G    + +  SL+ +Y
Sbjct: 474 ALFRKMDLEGVRANVVTFVSTIDACSSIGALVEGHAIFERVIVTGHLIDVVLGTSLINLY 533

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
            KCG ++ A  VF  +  ++++TW  ++   +QNG+   + +   +M   G +P+ +T +
Sbjct: 534 GKCGRLDYALEVFHYLSFKNIVTWNTILAASSQNGEETLSDELLQEMDLDGAQPNEMTLL 593

Query: 543 GLLFACSHAGLAENARWYFESMDKVYG--IKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
            +LF CSH GL   A  YF SM  VYG  + P  +HY C++DLLGRSG+L E +A +   
Sbjct: 594 NMLFGCSHNGLVAKAVSYFRSM--VYGHCLVPTSEHYGCLVDLLGRSGQLEEVEAFISSK 651

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAA 660
               D+ +W +LL +C +H D+E G RAA  +  L+P NA PYV LSNM++  G  +   
Sbjct: 652 PFSLDSVLWMSLLGSCVIHSDVERGLRAARRVLGLDPKNASPYVLLSNMFAAIGMLDAVK 711

Query: 661 RVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
            + KL   R ++KE   S++E N  VH F      H L   I +++ E    ++EAG+VP
Sbjct: 712 SLAKLAGERAMKKEQSRSYIEVNGVVHEFGVRAGLHRLGEKIGAQLREWSEEMEEAGFVP 771

Query: 721 DMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYIS 780
                LH+V          YH EKLA+AFG ++ P G P+ + KNLR+C  CH  +K+I 
Sbjct: 772 -----LHDVR--------GYHDEKLAIAFGAISSPPGVPLFVVKNLRMCVCCHGEIKHIC 818

Query: 781 AVYLRHIILRDSNRFHHFKA--GNCSCGDYW 809
            +  R I +R+ NR HHF+    +CSCGDYW
Sbjct: 819 KMTGRDISVREGNRVHHFRPMDASCSCGDYW 849



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 210/446 (47%), Gaps = 51/446 (11%)

Query: 23  ARYTHN--VGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           AR  H   + + ++P   +N ALV  +S  G +++A ++F++M  ++  TWN MIA YA 
Sbjct: 303 ARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQ 362

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
                                      GY++     EA +L+  M+  G  P + T  NV
Sbjct: 363 E--------------------------GYTD-----EALQLYVSMEAAGVEPDEITFVNV 391

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF-KMFPDGK 198
           L  CSL   L  G   H + +   +D +  V++ L+ MY+ C  + +A  +F K      
Sbjct: 392 LESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHS 451

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           + ++WT M+T  ++NG G  A+  FR M +EGV +N  TF S + AC+++ A   G  + 
Sbjct: 452 SVISWTAMLTALTRNGEGRSALALFRKMDLEGVRANVVTFVSTIDACSSIGALVEGHAIF 511

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
             ++ +G   +V + ++LI++Y KCG LD A  +  Y    N V+WN+++   ++ G   
Sbjct: 512 ERVIVTGHLIDVVLGTSLINLYGKCGRLDYALEVFHYLSFKNIVTWNTILAASSQNGEET 571

Query: 319 EALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
            +  L ++M     + ++ T  ++L  C  + +         S++              L
Sbjct: 572 LSDELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCL 631

Query: 378 IDMYAKQGNLD--CAFMV---FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           +D+  + G L+   AF+    F+L    D + W SL+  C  H   E  L+  +  R+ G
Sbjct: 632 VDLLGRSGQLEEVEAFISSKPFSL----DSVLWMSLLGSCVIHSDVERGLR--AARRVLG 685

Query: 433 ICPD----HVVVSSILSACAELTVLE 454
           + P     +V++S++ +A   L  ++
Sbjct: 686 LDPKNASPYVLLSNMFAAIGMLDAVK 711



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 180/362 (49%), Gaps = 5/362 (1%)

Query: 263 SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
           S  F  +  + + +++ Y KCG +  AR +       N  SW  ++  +A+ G HK  L 
Sbjct: 109 SKRFAGDRLLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLE 168

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV-NNALIDMY 381
           L ++M    +  +  T  +V+   +   + + A+ +H+    T    Y  V   ALIDMY
Sbjct: 169 LLRQMDLLGVWPNAVTLATVIGAVSELGNWDEARKIHARAAATCQLTYDVVLVTALIDMY 228

Query: 382 AKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVS 441
           AK G++  A +VF+  ++KD+    ++I+     G   +A+  F+ ++ SG+ P+ V  +
Sbjct: 229 AKCGDIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYA 288

Query: 442 SILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR 501
            +  ACA   V    +  H  F+ S     + V+ +LV +Y++CG + DA RVFD M  +
Sbjct: 289 LLFRACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGK 348

Query: 502 DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA-GLAENARWY 560
           +V+TW  +I G AQ G   EALQ Y  M A G +PD ITFV +L +CS A  LA     +
Sbjct: 349 NVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIH 408

Query: 561 FESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV-WKALLSACRVH 619
              +D   G        + +I +    G L +A  +  + V    + + W A+L+A   +
Sbjct: 409 KHVVDA--GYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRN 466

Query: 620 GD 621
           G+
Sbjct: 467 GE 468



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 152/302 (50%), Gaps = 13/302 (4%)

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG-FEGYKFVNNA 376
           K+ L+  ++ + +   +D   Y S+L     + D+   K++ + I  +  F G + + N 
Sbjct: 65  KQKLASLEEQNQKSGFVDPAAYVSLLK---QSGDVTALKTIQAHISHSKRFAGDRLLLNC 121

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           +++ Y K G +  A +VF+ ++  +V SWT L+   A +G ++  L+    M + G+ P+
Sbjct: 122 VVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPN 181

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD----NSLVLVYAKCGCINDAN 492
            V +++++ A +EL   +  +++HA   ++     L+ D     +L+ +YAKCG I  A 
Sbjct: 182 AVTLATVIGAVSELGNWDEARKIHA---RAAATCQLTYDVVLVTALIDMYAKCGDIFHAE 238

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
            VFD    +D+    A+I    Q G   +A+  ++++   G +P+ +T+  L  AC+  G
Sbjct: 239 VVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNG 298

Query: 553 LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
           +  +AR        +  ++P       ++ +  R G L +A+ + D+M G+ +   W  +
Sbjct: 299 VYSDARVAHMCF-ILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGK-NVVTWNVM 356

Query: 613 LS 614
           ++
Sbjct: 357 IA 358


>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 672

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 234/662 (35%), Positives = 376/662 (56%), Gaps = 1/662 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  +++I  YA +G + +A++LF++ P K+   W+ ++ G+   G    A ++F  M+
Sbjct: 6   DEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMR 65

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
               +P+  T  +VL +C+ + L + G Q HG  I   F  +  V   LV MY+K   + 
Sbjct: 66  NCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLS 125

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A  LF   PD  N V W  MI G+ QNG+  +A   F +M   GV  +  TF S L + 
Sbjct: 126 DALKLFNTMPD-TNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSV 184

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
              ++   G ++HG IL  G   +V+++SALID+Y KC D+  A ++ + S   + V   
Sbjct: 185 TESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCT 244

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           ++I G+   G + +AL +F+ +    +  +  T  SVL   A    LN  K +H+ I+K 
Sbjct: 245 AIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKH 304

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G +  + V +A++DMYAK G LD A+ +F  M +KD + W ++IT C+ +G  +EA+  F
Sbjct: 305 GLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLF 364

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             M   G+  D V +S+ LSACA L  L  G+ +H+  +K    S +  +++L+ +Y KC
Sbjct: 365 RQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKC 424

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G ++ A  VFD M  ++ ++W ++I     +G  + +L  + +ML  G +PD++TF+ +L
Sbjct: 425 GNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTIL 484

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
            AC HAG  +    YF  M + YGI    +HYAC++DL GR+G+L EA   +  M   PD
Sbjct: 485 SACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPD 544

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
             VW  LL ACRVHG++EL E A+  L +L+P N+  YV LSN+++ AG+W    ++R L
Sbjct: 545 DGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKIRSL 604

Query: 666 MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFA 725
           MK RG++K PG SW+E N   H+F++ D  HP    IYS ++ ++L +++ GY P     
Sbjct: 605 MKKRGVQKVPGYSWIEVNKTTHMFVAADGSHPESAQIYSVLNNLLLELRKEGYCPKPYLP 664

Query: 726 LH 727
           +H
Sbjct: 665 MH 666



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 150/465 (32%), Positives = 248/465 (53%), Gaps = 11/465 (2%)

Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
           F+++ FV + L+ +YA+  CI +A  LF   P+ K+ V W  M+ G+ + G    A++ F
Sbjct: 3   FNVDEFVGSSLIKLYAENGCIEDARRLFDKMPN-KDCVLWNVMLNGFVKCGEPNSAVKVF 61

Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
            DMR    + N  TF S+L+ CA+ +  +FG Q+HG ++S GF  +  V +AL+ MY+K 
Sbjct: 62  EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKF 121

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
           G L  A +L       N V+WN MI GF + GF  EA  LF +M +  +  D  T+ S L
Sbjct: 122 GQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFL 181

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVI 403
                +  L   K +H  I++ G     F+ +ALID+Y K  ++  A  +F    + D++
Sbjct: 182 PSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIV 241

Query: 404 SWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVF 463
             T++I+G   +G   +AL+ F  +    + P+ V ++S+L ACA L  L  G+++HA  
Sbjct: 242 VCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANI 301

Query: 464 LKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEAL 523
           LK G      V ++++ +YAKCG ++ A ++F  M  +D + W A+I  C+QNGK +EA+
Sbjct: 302 LKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAI 361

Query: 524 QFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH----YAC 579
             + QM   G   D ++    L AC++     + +     M     IK   D      + 
Sbjct: 362 DLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFM-----IKGAFDSEVFAESA 416

Query: 580 MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLEL 624
           +ID+ G+ G L  A+ + D M+ E +   W ++++A   HG LE+
Sbjct: 417 LIDMYGKCGNLSVARCVFD-MMREKNEVSWNSIIAAYGSHGHLEV 460



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 146/480 (30%), Positives = 238/480 (49%), Gaps = 34/480 (7%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  +S  G++ +A +LF  M D +  TWN MIA +  +G + EA  LF+E       
Sbjct: 112 NALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSE------- 164

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
                                   M   G  P   T  + L   +    L++G++ HGY 
Sbjct: 165 ------------------------MISAGVSPDSITFASFLPSVTESASLKQGKEIHGYI 200

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           ++    L+ F+ + L+D+Y KC+ +  A  +FK   +  + V  T +I+GY  NG    A
Sbjct: 201 LRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTN-VDIVVCTAIISGYVLNGLNNDA 259

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           +E FR +  E +  N  T  S+L ACA ++  + G ++H  IL  G +   +V SA++DM
Sbjct: 260 LEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDM 319

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           YAKCG LD A ++       + V WN++I   ++ G  +EA+ LF++M    +  D  + 
Sbjct: 320 YAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSI 379

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
            + L+  A+   L++ K++HS ++K  F+   F  +ALIDMY K GNL  A  VF++M++
Sbjct: 380 SAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMRE 439

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           K+ +SW S+I     HG  E +L  F  M   GI PDHV   +ILSAC     ++ G Q 
Sbjct: 440 KNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQY 499

Query: 460 HAVFLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMGCAQNG 517
                +  G  + +     +V ++ + G +N+A     +M  + D   W  L+  C  +G
Sbjct: 500 FRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHG 559



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 182/357 (50%), Gaps = 4/357 (1%)

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLF 324
           GF  + +V S+LI +YA+ G ++ ARRL +     + V WN M+ GF + G    A+ +F
Sbjct: 2   GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61

Query: 325 KKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
           + M     K +  T+ SVL+  AS         +H L++  GF     V NAL+ MY+K 
Sbjct: 62  EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKF 121

Query: 385 GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
           G L  A  +FN M D +V++W  +I G   +G  +EA   FS+M  +G+ PD +  +S L
Sbjct: 122 GQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFL 181

Query: 445 SACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVI 504
            +  E   L+ G+++H   L+ G    + + ++L+ +Y KC  +  A ++F      D++
Sbjct: 182 PSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIV 241

Query: 505 TWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAE-NARWYFES 563
             TA+I G   NG   +AL+ +  +L     P+ +T   +L AC  AGLA  N      +
Sbjct: 242 VCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPAC--AGLATLNLGKELHA 299

Query: 564 MDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
               +G+       + ++D+  + G+L  A  +  +M  E DA  W A+++ C  +G
Sbjct: 300 NILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRM-PEKDAVCWNAIITNCSQNG 355


>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
          Length = 1321

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 231/661 (34%), Positives = 373/661 (56%), Gaps = 3/661 (0%)

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G+   QY   + L  C  +G ++ G ++H + +K     + FV T L+DMYAKC  +  A
Sbjct: 109 GFPHRQYVF-SALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSA 167

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             ++       +      +I+ Y++NG+  +A + F  +   G   N +T+ ++L  C  
Sbjct: 168 VRVYDKM-TSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGT 226

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           +SA   G Q+H  ++   + +   V +AL+ +Y+KCG ++ A  + E     N +SW + 
Sbjct: 227 ISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTAS 286

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I GF + G  K+AL  F  M    I+ ++FT+  VL       D  + +  H+ ++K G 
Sbjct: 287 INGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGM 346

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLM-QDKDVISWTSLITGCAYHGSYEEALKYFS 426
               FV  A+IDMY+  G +D A   F  M +    +SW +LI G   +   E+A++ F 
Sbjct: 347 ASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFC 406

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
            M    +  +    S+I  AC+    L    Q+H+  +KS   S+L V +SL+  Y +CG
Sbjct: 407 RMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCG 466

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
            + +A +VF  +   DV++W ++I   +QNG   +A+    +M+  G KP   TF+ +L 
Sbjct: 467 SLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLS 526

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ACSH+GL +  + +F+SM + Y I+P   H +CM+D+LGR+G+L  A   + ++  +P A
Sbjct: 527 ACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTA 586

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
           ++W+ LL+ACR + +L++ E  A  + +LEP +A  YV LSNMY+  G+W DA   R+LM
Sbjct: 587 SIWRPLLAACRYNSNLQMAEYVAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLM 646

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFAL 726
           + + I KEPGCSW+E N++++ F S D+ HP    +Y K+ +++  I++ GY P     L
Sbjct: 647 EQKEISKEPGCSWIEVNNKMYKFFSHDKAHPEMPKVYEKLKQLVRQIQDIGYSPPTTTVL 706

Query: 727 HNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRH 786
           H    + KE  + YHSEKLAV FGLL+LP G PIR+ KNLRVC DC++ MKYIS +  R+
Sbjct: 707 HPESRQPKEQLILYHSEKLAVCFGLLSLPPGKPIRVLKNLRVCLDCYSTMKYISRITDRY 766

Query: 787 I 787
           I
Sbjct: 767 I 767



 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 195/533 (36%), Positives = 290/533 (54%), Gaps = 32/533 (6%)

Query: 149  LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
            L RG   H + +        +    L+  Y +C  +  A  LF   P+  N   W  +  
Sbjct: 819  LYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPN-TNIRRWIVLTG 877

Query: 209  GYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEA 268
              ++ G+  +A+  F +M+ EG+  NQF  PSIL AC  +S R  G  +H  IL + FE+
Sbjct: 878  ACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFES 937

Query: 269  NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH 328
            + Y+ SALI MY+KCG ++ A R+ ++    + V  N+M+ G+A+ GF  EAL L +KM 
Sbjct: 938  DAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQ 997

Query: 329  ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD 388
               +K +  ++ +++  F+   D +    V  L+   G E                    
Sbjct: 998  QAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVE-------------------- 1037

Query: 389  CAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
                        DV+SWTS+I+G   +    E    F +M   G CP  V +SS+L AC 
Sbjct: 1038 -----------PDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACT 1086

Query: 449  ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
             +  L  G+++H   +  G    + V ++LV +YAKCG I++A  +F  M  R+ +TW +
Sbjct: 1087 NVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNS 1146

Query: 509  LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
            LI G A +G   EA++ ++QM    TK D++TF  +L ACSHAG+ E     F  M + Y
Sbjct: 1147 LIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKY 1206

Query: 569  GIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
             I+P  +HYACM+DLLGR+GKL EA  L+  M  EPD  VW ALL ACR HG++EL E A
Sbjct: 1207 RIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVA 1266

Query: 629  ANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVE 681
            A +LFELEP +    + LSN+Y+ AG+W +AA+++K+MK R   K PGCSW+E
Sbjct: 1267 AEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 1319



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 146/526 (27%), Positives = 257/526 (48%), Gaps = 34/526 (6%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F   ++I  YA  G +  A +++++    +  T + LI  Y+  G  ++AF++F Q+ 
Sbjct: 147 DEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIG 206

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G RP+ YT   +L +C     +Q G+Q H + +K  +     V   L+ +Y+KC  + 
Sbjct: 207 NMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMME 266

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           EAE +F+     +N ++WT  I G+ Q+G   KA++ F  MR  G+E N+FTF  +L +C
Sbjct: 267 EAEIVFESLRQ-RNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASC 325

Query: 246 AAVSARDF--GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA-RRLLEYSEIDNEV 302
             V  +DF  G   H  ++  G  + V+V +A+IDMY+  G++D A ++  +     + V
Sbjct: 326 GCV--KDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNV 383

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SWN++I G+      ++A+  F +M   D+  ++FTY ++    +S   L     +HS +
Sbjct: 384 SWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRL 443

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           +K+  E    V ++LI+ Y + G+L+ A  VF  + D DV+SW S+I   + +G   +A+
Sbjct: 444 IKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAI 503

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
                M   G  P      ++LSAC+   +++ GQ+    F K     S+  D S+    
Sbjct: 504 FLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQE----FFK-----SMVQDYSIQPEE 554

Query: 483 AKCGCIND----ANRVFDSMHTRDVIT-------WTALIMGCAQNGKGKEALQFYDQMLA 531
             C C+ D    A ++ +++     +T       W  L+  C  N   + A    +++L 
Sbjct: 555 THCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKIL- 613

Query: 532 RGTKPD----YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPG 573
              +P+    Y+T   +         AEN R   E   K    +PG
Sbjct: 614 -DLEPNDATVYVTLSNMYAEVGRWADAENQRRLME--QKEISKEPG 656



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 217/447 (48%), Gaps = 34/447 (7%)

Query: 73   MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
            +++ Y   G+L  A+KLF++ P  N   W  L    +  G   EA   F +MQ EG RP+
Sbjct: 844  LMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPN 903

Query: 133  QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
            Q+ L ++L+ C      + GE  H   +K  F+ +A++++ L+ MY+KC  + +A  +F 
Sbjct: 904  QFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFD 963

Query: 193  MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
               D K+ V    M++GY+Q+G+  +A++  + M+  GV+ N  ++ +++   + V  + 
Sbjct: 964  WIVD-KDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKS 1022

Query: 253  FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
              ++V   + ++G E +V                               VSW S+I GF 
Sbjct: 1023 MVSEVFRLMTANGVEPDV-------------------------------VSWTSVISGFV 1051

Query: 313  RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
            +   + E    FK+M  +       T  S+L    +  +L + K +H   +  G E   +
Sbjct: 1052 QNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVY 1111

Query: 373  VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
            V +AL+DMYAK G +  A ++F +M +++ ++W SLI G A HG   EA++ F+ M  S 
Sbjct: 1112 VRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESD 1171

Query: 433  ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCINDA 491
               DH+  +++L+AC+   ++E G+ +     +       L     +V +  + G +++A
Sbjct: 1172 TKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEA 1231

Query: 492  NRVFDSMHTR-DVITWTALIMGCAQNG 517
              +  +M    D   W AL+  C  +G
Sbjct: 1232 YDLIKAMPVEPDKFVWGALLGACRNHG 1258



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 201/416 (48%), Gaps = 10/416 (2%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++  Y+  G + EA+ +F     +N  +W++ I G+  +G   +A + F  M+  G  
Sbjct: 253 NALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIE 312

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+++T   VL  C        G  FH   IK       FV T ++DMY+    + EAE  
Sbjct: 313 PNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQ 372

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           FK      ++V+W  +I GY  N    KA+E F  M  E V  N+FT+ +I  AC++  +
Sbjct: 373 FKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPS 432

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
                Q+H  ++ S  E+N++V S+LI+ Y +CG L++A ++       + VSWNS+I  
Sbjct: 433 LATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKA 492

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEG 369
           +++ G   +A+ L +KM     K    T+ +VL+ C  S +     +   S++     + 
Sbjct: 493 YSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQP 552

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEALKYFSDM 428
            +   + ++D+  + G L+ A      +  K   S W  L+  C Y+ + + A +Y ++ 
Sbjct: 553 EETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMA-EYVAE- 610

Query: 429 RISGICPD----HVVVSSILSACAELTVLEFGQQV--HAVFLKSGGCSSLSVDNSL 478
           +I  + P+    +V +S++ +        E  +++       K  GCS + V+N +
Sbjct: 611 KILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWIEVNNKM 666



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 144/302 (47%), Gaps = 6/302 (1%)

Query: 330  RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDC 389
            R  +    TY   ++ +A +  L   +++H+ +V  G     +    L+  Y + G L  
Sbjct: 797  RTFQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSN 856

Query: 390  AFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE 449
            A  +F+ + + ++  W  L   CA  G YEEAL  FS+M+  G+ P+  V+ SIL AC  
Sbjct: 857  ARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGH 916

Query: 450  LTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTAL 509
            L+    G+ +H V LK+   S   + ++L+ +Y+KCG +  A RVFD +  +D++   A+
Sbjct: 917  LSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAM 976

Query: 510  IMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG 569
            + G AQ+G   EAL    +M   G KP+ +++  L+   S  G        F  M    G
Sbjct: 977  VSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLM-TANG 1035

Query: 570  IKPGPDHYACMIDLLGRSGKLIEA----KALLDQMVGEPDATVWKALLSACRVHGDLELG 625
            ++P    +  +I    ++    E     K +LDQ    P +    +LL AC    +L  G
Sbjct: 1036 VEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFC-PSSVTISSLLPACTNVANLRHG 1094

Query: 626  ER 627
            + 
Sbjct: 1095 KE 1096



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 146/304 (48%), Gaps = 42/304 (13%)

Query: 46   FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREA----KKLFNETPFKNFFTW 101
            +S  G +++A ++F+ + D+D    N M++ YA  G + EA    +K+       N  +W
Sbjct: 949  YSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSW 1008

Query: 102  SSLIYGYSNYG------------------LDI-----------------EAFELFWQMQL 126
            ++LI G+S  G                   D+                 E F+ F +M  
Sbjct: 1009 NTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLD 1068

Query: 127  EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
            +G+ PS  T+ ++L  C+    L+ G++ HGYA+    + + +V + LVDMYAKC  I E
Sbjct: 1069 QGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISE 1128

Query: 187  AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
            A+ LF M P+ +N V W ++I GY+ +GY  +AIE F  M     + +  TF ++L AC+
Sbjct: 1129 AKILFYMMPE-RNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACS 1187

Query: 247  AVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEVSW 304
                 + G  +   +      E  +   + ++D+  + G L  A  L++   ++ ++  W
Sbjct: 1188 HAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVW 1247

Query: 305  NSMI 308
             +++
Sbjct: 1248 GALL 1251



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 123/291 (42%), Gaps = 36/291 (12%)

Query: 3   KLDFKILNFSLRCRSKII-GPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFE 60
           +  F I+  S  C    I G   +T  +   +     +  A++D +S  GE+DEA + F+
Sbjct: 315 EFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFK 374

Query: 61  KMSD-RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFE 119
           +M       +WN +IA Y           + NE   K                    A E
Sbjct: 375 QMGRAASNVSWNALIAGY-----------VLNEKIEK--------------------AME 403

Query: 120 LFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYA 179
            F +M  E    +++T  N+ + CS    L    Q H   IK+  + N  V + L++ Y 
Sbjct: 404 AFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYT 463

Query: 180 KCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFP 239
           +C  +  A  +F    D  + V+W ++I  YSQNG  +KAI   R M  EG +    TF 
Sbjct: 464 QCGSLENAVQVFTQISDA-DVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFL 522

Query: 240 SILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSA 289
           ++L+AC+       G +    ++     +      S ++D+  + G L++A
Sbjct: 523 TVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENA 573



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 9/156 (5%)

Query: 64   DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
            ++D +  + ++  YA  G + EAK LF   P +N  TW+SLI+GY+N+G   EA ELF Q
Sbjct: 1107 EKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQ 1166

Query: 124  MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF-----HGYAIKTCFDLNAFVVTGLVDMY 178
            M+    +    T   VL  CS  G+++ GE         Y I+   +  A     +VD+ 
Sbjct: 1167 MEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYAC----MVDLL 1222

Query: 179  AKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
             +   + EA  L K  P   +   W  ++     +G
Sbjct: 1223 GRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHG 1258


>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g16835, mitochondrial; AltName: Full=Protein DYW10;
           Flags: Precursor
 gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 656

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 239/592 (40%), Positives = 354/592 (59%), Gaps = 16/592 (2%)

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID 278
           A+  F  MR +    N  T+ S+L   +   +R   A     +     E + +  + ++ 
Sbjct: 80  ALRVFHGMRAK----NTITWNSLLIGISKDPSRMMEAHQ---LFDEIPEPDTFSYNIMLS 132

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
            Y +  + + A+   +     +  SWN+MI G+AR+G  ++A  LF  M  ++    + +
Sbjct: 133 CYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKN----EVS 188

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
           + ++++ +    DL  A     +    G   +     A+I  Y K   ++ A  +F  M 
Sbjct: 189 WNAMISGYIECGDLEKASHFFKVAPVRGVVAW----TAMITGYMKAKKVELAEAMFKDMT 244

Query: 399 -DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
            +K++++W ++I+G   +   E+ LK F  M   GI P+   +SS L  C+EL+ L+ G+
Sbjct: 245 VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGR 304

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
           Q+H +  KS  C+ ++   SL+ +Y KCG + DA ++F+ M  +DV+ W A+I G AQ+G
Sbjct: 305 QIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHG 364

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY 577
              +AL  + +M+    +PD+ITFV +L AC+HAGL      YFESM + Y ++P PDHY
Sbjct: 365 NADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHY 424

Query: 578 ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEP 637
            CM+DLLGR+GKL EA  L+  M   P A V+  LL ACRVH ++EL E AA  L +L  
Sbjct: 425 TCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNS 484

Query: 638 MNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHP 697
            NA  YVQL+N+Y++  +WED ARVRK MK   + K PG SW+E  ++VH F S DR HP
Sbjct: 485 QNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHP 544

Query: 698 LRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQG 757
               I+ K+ E+   +K AGY P++ FALHNVEEE KE  L +HSEKLAVAFG + LPQG
Sbjct: 545 ELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQG 604

Query: 758 APIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           + I++FKNLR+CGDCH A+K+IS +  R II+RD+ RFHHFK G+CSCGDYW
Sbjct: 605 SQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 212/487 (43%), Gaps = 45/487 (9%)

Query: 19  IIGPARYTHNVGNSVKPASDLNRALVDFS-NSGEIDEAGQLFEKMSDRDGFTWNTMIAAY 77
           I G  R  H  G   K     N  L+  S +   + EA QLF+++ + D F++N M++ Y
Sbjct: 77  IDGALRVFH--GMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCY 134

Query: 78  ANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLD 137
             +    +A+  F+  PFK+  +W+++I GY+  G   +A ELF+ M +E    S   + 
Sbjct: 135 VRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM-MEKNEVSWNAMI 193

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           +    C   G L++   F     K          T ++  Y K K +  AE +FK     
Sbjct: 194 SGYIEC---GDLEKASHF----FKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVN 246

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           KN V W  MI+GY +N      ++ FR M  EG+  N     S L  C+ +SA   G Q+
Sbjct: 247 KNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQI 306

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           H  +  S    +V   ++LI MY KCG+L  A +L E  +  + V+WN+MI G+A+ G  
Sbjct: 307 HQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNA 366

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
            +AL LF++M    I+ D  T+ +VL   A N         H+ +V  G   ++    ++
Sbjct: 367 DKALCLFREMIDNKIRPDWITFVAVL--LACN---------HAGLVNIGMAYFE----SM 411

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           +  Y  +   D                +T ++      G  EEALK    M      P  
Sbjct: 412 VRDYKVEPQPD---------------HYTCMVDLLGRAGKLEEALKLIRSMPFR---PHA 453

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
            V  ++L AC     +E  +      L+    ++      L  +YA      D  RV   
Sbjct: 454 AVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGY-VQLANIYASKNRWEDVARVRKR 512

Query: 498 MHTRDVI 504
           M   +V+
Sbjct: 513 MKESNVV 519


>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
          Length = 704

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 238/593 (40%), Positives = 363/593 (61%), Gaps = 2/593 (0%)

Query: 218 KAIECFRDMRVEGV-ESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
           +A+E F  + + G  + +  T+ ++++AC  + +     +V   +++SG + + Y+++ +
Sbjct: 113 EALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRV 172

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           + M+ KCG +  ARRL +     N +SWN++I G    G + EA  LF  M         
Sbjct: 173 LLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGS 232

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
             + +++   A    +   + +HS  +KTG  G  FV  ALIDMY+K G+++ A  VF+ 
Sbjct: 233 RMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQ 292

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
           M +K  + W S+I G A HG  EEAL  + +MR SG+  D+   S I+  CA L  LE  
Sbjct: 293 MPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHA 352

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
           +Q HA  ++ G    +  + +LV +Y+K G I DA  VFD M  ++VI+W ALI G   +
Sbjct: 353 KQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNH 412

Query: 517 GKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH 576
           G+G EA++ +++ML  G  P+++TF+ +L ACS++GL++     FESM + + IKP   H
Sbjct: 413 GRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMH 472

Query: 577 YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELE 636
           YACMI+LLGR G L EA AL+     +P   +W ALL+ACRVH + ELG+ AA  L+ + 
Sbjct: 473 YACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMG 532

Query: 637 PMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGH 696
           P     YV L N+Y+ +G+ E+AA V + +K RG+R  P CSW+E   Q + FIS D+ H
Sbjct: 533 PEKLSNYVVLLNIYNXSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCH 592

Query: 697 PLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQ 756
               +IY K+DE+ML I + GYVP   F L +V+E+ + + L YHSEKLA+AFGL+    
Sbjct: 593 AQSKEIYQKLDELMLEISKHGYVPQXKFLLPDVDEQEERV-LLYHSEKLAIAFGLINTSD 651

Query: 757 GAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             P++I ++ R+CGDCH+A+K I+ V  R I++RD++RFHHFK G+CSCGDYW
Sbjct: 652 WTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 239/493 (48%), Gaps = 51/493 (10%)

Query: 116 EAFELFWQMQLEG-YRPSQYTLDNVLRLC----SLKGLLQRGEQFHGYAIKTCFDLNAFV 170
           EA ELF  ++L G Y     T D ++  C    S++G+    ++   Y I +  D + ++
Sbjct: 113 EALELFEILELNGAYDMDSETYDALVSACIGLKSIRGV----KKVFNYMINSGLDPDEYL 168

Query: 171 VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG 230
              ++ M+ KC  + +A  LF   P+ KN ++W T+I G    G  F+A   F  M    
Sbjct: 169 RNRVLLMHVKCGMMIDARRLFDEMPE-KNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXF 227

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
            ++    F +++ A A +     G Q+H C L +G   +V+V  ALIDMY+KCG ++ A+
Sbjct: 228 SDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQ 287

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
            + +       V WNS+I G+A  G+ +EALS++ +M    +KID+FT+  ++   A   
Sbjct: 288 CVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLA 347

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
            L +AK  H+ +V+ GF      N AL+D+Y+K G ++ A  VF++M  K+VISW +LI 
Sbjct: 348 SLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIA 407

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
           G   HG   EA++ F  M   G+ P+HV   ++LSAC+   + + G +            
Sbjct: 408 GYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWE------------ 455

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEAL--QFYDQ 528
                                  +F+SM     I   A+   C     G+E L  + +  
Sbjct: 456 -----------------------IFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFAL 492

Query: 529 MLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP-DHYACMIDLLGRS 587
           +     KP    +  LL AC      E  ++   + +K+YG+ P    +Y  ++++   S
Sbjct: 493 IKDAPFKPTVNMWAALLTACRVHKNFELGKF---AAEKLYGMGPEKLSNYVVLLNIYNXS 549

Query: 588 GKLIEAKALLDQM 600
           G+L EA A++  +
Sbjct: 550 GRLEEAAAVIQTL 562



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 195/377 (51%), Gaps = 5/377 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D +  N ++  +   G + +A++LF+E P KN  +W+++I G  + G   EAF LF  
Sbjct: 163 DPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLM 222

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M              ++R  +  GL+  G Q H  ++KT    + FV   L+DMY+KC  
Sbjct: 223 MWQXFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGS 282

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I +A+ +F   P+ K  V W ++I GY+ +GY  +A+  + +MR  GV+ + FTF  I+ 
Sbjct: 283 IEDAQCVFDQMPE-KTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIR 341

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
            CA +++ +   Q H  ++  GF  ++   +AL+D+Y+K G ++ A+ + +     N +S
Sbjct: 342 ICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVIS 401

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLI 362
           WN++I G+   G   EA+ +F++M    +  +  T+ +VL+ C  S +     +   S+ 
Sbjct: 402 WNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMS 461

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEA 421
                +        +I++  ++G LD AF +      K  ++ W +L+T C  H ++E  
Sbjct: 462 RDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFE-- 519

Query: 422 LKYFSDMRISGICPDHV 438
           L  F+  ++ G+ P+ +
Sbjct: 520 LGKFAAEKLYGMGPEKL 536



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 68/172 (39%), Gaps = 33/172 (19%)

Query: 40  NRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF 98
           N ALVD +S  G I++A  +F+ M  ++  +WN +IA Y N GR                
Sbjct: 371 NTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGR---------------- 414

Query: 99  FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG-EQFHG 157
                           +EA E+F +M  EG  P+  T   VL  CS  GL  RG E F  
Sbjct: 415 ---------------GVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFES 459

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
            +        A     ++++  +   + EA  L K  P       W  ++T 
Sbjct: 460 MSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTA 511


>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
          Length = 749

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 246/638 (38%), Positives = 364/638 (57%), Gaps = 38/638 (5%)

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
           L+D Y KC  +  A  +F   P  ++ VAW +MI  Y +NG   +AI+ ++ M  +G+  
Sbjct: 117 LIDAYLKCGSVVYARKVFDEVPH-RHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILP 175

Query: 234 NQFTFPSILTACAAVSARDFGAQVHG--CILSSGFEANVYVQSALIDMYAKCGDLDSARR 291
           ++FTF S+  A + +     G + HG   +L  G  +NV+V SAL+DMYAK G +  AR 
Sbjct: 176 DEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGV-SNVFVGSALVDMYAKFGKMRDARL 234

Query: 292 LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID 351
           + +     + V + ++IVG++  G   E+L +F+ M  + I+ +++T  SVL C  +  D
Sbjct: 235 VSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLED 294

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
           L + + +H LIVK G E                                  ++WTS+I G
Sbjct: 295 LTSGRLIHGLIVKAGLE--------------------------------SAVTWTSVIVG 322

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
              +G  E AL  F  M  S I P+   +SS+L AC+ L +LE G+Q+HA+ +K G    
Sbjct: 323 LVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDID 382

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
             V  +L+  Y KCG    A  VF+ +   DV++  ++I   AQNG G EALQ +  M  
Sbjct: 383 KYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKD 442

Query: 532 RGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLI 591
            G +P+ +T++G+L AC++AGL E     F S      I+   DHYACM+DLLGR+G+L 
Sbjct: 443 TGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLK 502

Query: 592 EAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYS 651
           EA+ L++Q V   D  +W+ LLSACR+HGD+E+ +R  N + +L P +   +V LSN+Y+
Sbjct: 503 EAEMLINQ-VNISDVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYA 561

Query: 652 TAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIML 711
           + G W     ++  M+   ++K P  SWV+   ++H F++ D  HP   DI  K++E++ 
Sbjct: 562 STGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIE 621

Query: 712 LIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLL-TLPQGAPIRIFKNLRVCG 770
            +KE GYVPD  F L +++EE K   L YHSEKLAVAF L  +  +   IRI KNLRVCG
Sbjct: 622 KVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCG 681

Query: 771 DCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDY 808
           DCHT MK++S +  R II RD  RFHHF+ G CSCGDY
Sbjct: 682 DCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDY 719



 Score =  216 bits (549), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 137/463 (29%), Positives = 237/463 (51%), Gaps = 37/463 (7%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +I AY   G +  A+K+F+E P ++   W+S+I  Y   G   EA +++ +M  +G  
Sbjct: 115 NKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGIL 174

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDL-NAFVVTGLVDMYAKCKCIFEAEY 189
           P ++T  +V +  S  GL+  G++ HG ++     + N FV + LVDMYAK   + +A  
Sbjct: 175 PDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARL 234

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +      GK+ V +T +I GYS +G   ++++ FR+M  +G+E+N++T  S+L  C  + 
Sbjct: 235 VSDQVV-GKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLE 293

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
               G  +HG I+ +G E+                                 V+W S+IV
Sbjct: 294 DLTSGRLIHGLIVKAGLES--------------------------------AVTWTSVIV 321

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           G  + G  + AL  F++M    I  + FT  SVL   +S   L   K +H++++K G + 
Sbjct: 322 GLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDI 381

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
            K+V  ALID Y K G+ + A  VFN + + DV+S  S+I   A +G   EAL+ FS M+
Sbjct: 382 DKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMK 441

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLVLVYAKCGC 487
            +G+ P++V    +LSAC    +LE G  + +    SG    L+ D+   +V +  + G 
Sbjct: 442 DTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNI-ELTKDHYACMVDLLGRAGR 500

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
           + +A  + + ++  DV+ W  L+  C  +G  + A +  ++++
Sbjct: 501 LKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVMNRVI 543



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 194/405 (47%), Gaps = 43/405 (10%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  + ++  YA  G++R+A+ + ++   K+   +++LI GYS++G D E+ ++F  M  +
Sbjct: 214 FVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKK 273

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G   ++YTL +VL  C     L  G   HG  +K   +                      
Sbjct: 274 GIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLE---------------------- 311

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
                      + V WT++I G  QNG    A+  FR M    +  N FT  S+L AC++
Sbjct: 312 -----------SAVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSS 360

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE-YSEIDNEVSWNS 306
           ++  + G Q+H  ++  G + + YV +ALID Y KCG  + AR +     E+D  VS NS
Sbjct: 361 LAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVD-VVSVNS 419

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           MI  +A+ GF  EAL LF  M    ++ ++ T+  VL+   +   L     + S    +G
Sbjct: 420 MIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSG 479

Query: 367 -FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
             E  K     ++D+  + G L  A M+ N +   DV+ W +L++ C  HG  E A +  
Sbjct: 480 NIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVM 539

Query: 426 SDMRISGICPD----HVVVSSILSACAELT-VLEFGQQVHAVFLK 465
           +  R+  + P+    HV++S++ ++    + V+E    +  + LK
Sbjct: 540 N--RVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLK 582



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 143/280 (51%), Gaps = 8/280 (2%)

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
           + +   + S  +K GF  +  + N LID Y K G++  A  VF+ +  + +++W S+I  
Sbjct: 94  ITDITKIQSHALKRGF--HHSLGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIAS 151

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG-GCS 470
              +G  +EA+  +  M   GI PD    SS+  A ++L ++  GQ+ H   +  G G S
Sbjct: 152 YIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVS 211

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
           ++ V ++LV +YAK G + DA  V D +  +DV+ +TALI+G + +G+  E+LQ +  M 
Sbjct: 212 NVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMT 271

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLL--GRSG 588
            +G + +  T   +L  C +     + R     + K  G++      + ++ L+  GR  
Sbjct: 272 KKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKA-GLESAVTWTSVIVGLVQNGREE 330

Query: 589 -KLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGER 627
             L++ + +L   +  P++    ++L AC     LE G++
Sbjct: 331 IALLKFRQMLRSSI-TPNSFTLSSVLRACSSLAMLEQGKQ 369



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 95/183 (51%), Gaps = 7/183 (3%)

Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT 500
           SS++  C  +  +    ++ +  LK G   SL   N L+  Y KCG +  A +VFD +  
Sbjct: 82  SSLIQQCIGIKSITDITKIQSHALKRGFHHSLG--NKLIDAYLKCGSVVYARKVFDEVPH 139

Query: 501 RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA-ENARW 559
           R ++ W ++I    +NG+ KEA+  Y +M+  G  PD  TF  +  A S  GL  E  R 
Sbjct: 140 RHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRA 199

Query: 560 YFESMDKVYGIKPGPDHY-ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRV 618
           + +S+  V G+        + ++D+  + GK+ +A+ + DQ+VG+ D  ++ AL+     
Sbjct: 200 HGQSV--VLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGK-DVVLFTALIVGYSH 256

Query: 619 HGD 621
           HG+
Sbjct: 257 HGE 259



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 2/152 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D +    +I  Y   G    A+ +FN     +  + +S+IY Y+  G   EA +LF  
Sbjct: 380 DIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSG 439

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC-FDLNAFVVTGLVDMYAKCK 182
           M+  G  P+  T   VL  C+  GLL+ G      A  +   +L       +VD+  +  
Sbjct: 440 MKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAG 499

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
            + EAE L     +  + V W T+++    +G
Sbjct: 500 RLKEAEMLINQV-NISDVVIWRTLLSACRIHG 530


>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
          Length = 513

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 218/507 (42%), Positives = 334/507 (65%), Gaps = 1/507 (0%)

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SW S+I G+A+     EAL L   M     K + FT+ S+L    ++      + +H+L 
Sbjct: 8   SWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALT 67

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           VK  +    +V +AL+DMYA+ G +D A  VF+ ++ K+ +SW +LI G A  G  E  L
Sbjct: 68  VKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTL 127

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
             F++M+ +G    H   SS+ SA A +  LE G+ VHA  +KSG   S  V N+++ +Y
Sbjct: 128 LMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMY 187

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
           AK G + DA +VFD +  +D++TW +++   AQ G G+EA+  +++M   G   + ITF+
Sbjct: 188 AKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFL 247

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
            +L ACSH GL +  + YF+ M K + ++P  DHY  ++DLLGR+G L +A   + +M  
Sbjct: 248 SILTACSHGGLVKEGKQYFDMM-KEHNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPM 306

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
           +P A VW ALL +CR+H + ++G+ AA+++FEL+P +  P V L N+Y++ G+W+ AARV
Sbjct: 307 KPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARV 366

Query: 663 RKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDM 722
           RK+MK+ G++KEP CSWVE  + VH+F++ D  HP   +IY K +EI + I++AGYVP+ 
Sbjct: 367 RKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYVPNT 426

Query: 723 NFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAV 782
           ++ L +V+E+ ++  L YHSEK+A+AF L+ +P GA IRI KN+R+CGDCH+A +YIS V
Sbjct: 427 DYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAFRYISKV 486

Query: 783 YLRHIILRDSNRFHHFKAGNCSCGDYW 809
           + R I++RD+NRFHHF +G+CSCGDYW
Sbjct: 487 FEREIVVRDTNRFHHFSSGSCSCGDYW 513



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 172/324 (53%), Gaps = 1/324 (0%)

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           ++  +WT++I GY+QN    +A+     M     + N FTF S+L A  A ++   G Q+
Sbjct: 4   RDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIGEQI 63

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           H   +   +  +VYV SAL+DMYA+CG +D A  + +  E  N VSWN++I GFAR+G  
Sbjct: 64  HALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDG 123

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
           +  L +F +M     +   FTY SV +  A    L   K VH+ ++K+G     FV N +
Sbjct: 124 ETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTI 183

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           +DMYAK G++  A  VF+ +  KD+++W S++T  A +G   EA+ +F +MR  G+  + 
Sbjct: 184 LDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQ 243

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR-VFD 496
           +   SIL+AC+   +++ G+Q   +  +      +    ++V +  + G +NDA   +F 
Sbjct: 244 ITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLNDALVFIFK 303

Query: 497 SMHTRDVITWTALIMGCAQNGKGK 520
                    W AL+  C  +   K
Sbjct: 304 MPMKPTAAVWGALLGSCRMHKNAK 327



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 168/344 (48%), Gaps = 12/344 (3%)

Query: 96  KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
           ++  +W+SLI GY+   +  EA  L   M    ++P+ +T  ++L+          GEQ 
Sbjct: 4   RDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIGEQI 63

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGY 215
           H   +K  +  + +V + L+DMYA+C  +  A  +F    + KN V+W  +I G+++ G 
Sbjct: 64  HALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQL-ESKNGVSWNALIAGFARKGD 122

Query: 216 GFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSA 275
           G   +  F +M+  G E+  FT+ S+ +A A + A + G  VH  ++ SG   + +V + 
Sbjct: 123 GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNT 182

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           ++DMYAK G +  AR++ ++ +  + V+WNSM+  FA+ G  +EA++ F++M    + ++
Sbjct: 183 ILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLN 242

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL-DCAFMVF 394
             T+ S+L   +    +   K    ++ +   E        ++D+  + G L D    +F
Sbjct: 243 QITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLNDALVFIF 302

Query: 395 NLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
            +        W +L+  C  H           + +I     DHV
Sbjct: 303 KMPMKPTAAVWGALLGSCRMH----------KNAKIGQFAADHV 336



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 148/305 (48%), Gaps = 5/305 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +  + ++  YA  GR+  A  +F++   KN  +W++LI G++  G       +F +MQ
Sbjct: 75  DVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQ 134

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G+  + +T  +V    +  G L++G+  H + IK+   L+AFV   ++DMYAK   + 
Sbjct: 135 RNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMI 194

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A  +F    D K+ V W +M+T ++Q G G +A+  F +MR  GV  NQ TF SILTAC
Sbjct: 195 DARKVFDHV-DKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTAC 253

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           +       G Q    +     E  +     ++D+  + G L+ A   +    +    +  
Sbjct: 254 SHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVW 313

Query: 306 SMIVGFARQGFHKEA-LSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIV 363
             ++G  R   HK A +  F   H  ++  DD   P +L N +AS    + A  V  ++ 
Sbjct: 314 GALLGSCR--MHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAARVRKMMK 371

Query: 364 KTGFE 368
            TG +
Sbjct: 372 ATGVK 376



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 136/286 (47%), Gaps = 17/286 (5%)

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
           M  +D+ SWTSLI G A +   +EAL     M      P+    +S+L A         G
Sbjct: 1   MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
           +Q+HA+ +K      + V ++L+ +YA+CG ++ A  VFD + +++ ++W ALI G A+ 
Sbjct: 61  EQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARK 120

Query: 517 GKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH 576
           G G+  L  + +M   G +  + T+  +  A +  G  E  +W    M     IK G   
Sbjct: 121 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHM-----IKSGERL 175

Query: 577 YA----CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNL 632
            A     ++D+  +SG +I+A+ + D  V + D   W ++L+A   +G   LG  A  + 
Sbjct: 176 SAFVGNTILDMYAKSGSMIDARKVFDH-VDKKDLVTWNSMLTAFAQYG---LGREAVTHF 231

Query: 633 FELEP----MNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
            E+      +N + ++ +    S  G  ++  +   +MK   +  E
Sbjct: 232 EEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPE 277



 Score = 46.6 bits (109), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 12/185 (6%)

Query: 21  GPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           G   + H + +  + ++ +   ++D ++ SG + +A ++F+ +  +D  TWN+M+ A+A 
Sbjct: 161 GKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQ 220

Query: 80  SGRLREAKKLFNETP----FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYT 135
            G  REA   F E        N  T+ S++   S+ GL  E  + F  M+     P    
Sbjct: 221 YGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDH 280

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV---VTGLVDMYAKCKC-IFEAEYLF 191
              V+ L    GLL     F     K      A V   + G   M+   K   F A+++F
Sbjct: 281 YVTVVDLLGRAGLLNDALVF---IFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVF 337

Query: 192 KMFPD 196
           ++ PD
Sbjct: 338 ELDPD 342


>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
 gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
          Length = 604

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 232/580 (40%), Positives = 345/580 (59%), Gaps = 7/580 (1%)

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID---MYAKCGDLDSAR 290
           NQ    S+L+ C +++      Q+    + +  ++++ V + LI+   +      +D A 
Sbjct: 28  NQLHPLSLLSKCTSLNELK---QIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAH 84

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
            L +     + + +N M  G+AR      A SLF ++    +  DD+T+ S+L   AS+ 
Sbjct: 85  HLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSK 144

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
            L     +H   VK G     ++   LI+MYA+  +++ A  VF+ M+   ++S+ ++IT
Sbjct: 145 ALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIIT 204

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
           G A      EAL  F +++ S I P  V + S++ +CA L  L+ G+ +H    K G   
Sbjct: 205 GYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDK 264

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
            + V+ +L+ ++AKCG + DA  +F+ M  RD   W+A+I+  A +G G +A+  +++M 
Sbjct: 265 YVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMK 324

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKL 590
             G +PD ITF+GLL+ACSHAGL E  R YF SM K YGI PG  HY CM+DLLGR+G L
Sbjct: 325 REGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHL 384

Query: 591 IEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMY 650
            EA   +D++  +    +W+ LLSAC  HG++E+ +R    +FEL+  +   YV LSN+Y
Sbjct: 385 DEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLY 444

Query: 651 STAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIM 710
           +  G+WED   +RKLMK RG+ K PGCS VE N+ VH F S D  H +  ++   +DE+M
Sbjct: 445 ARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDELM 504

Query: 711 LLIKEAGYVPDMNFALH-NVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVC 769
             IK  GYVPD +   H ++EEEGKE+ L YHSEKLA+AFGLL  P G  IR+ KNLR+C
Sbjct: 505 KEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVAKNLRIC 564

Query: 770 GDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           GDCH A K IS ++ R I++RD  RFH F+ G CSCGD+W
Sbjct: 565 GDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSCGDFW 604



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 199/386 (51%), Gaps = 6/386 (1%)

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVD---MYAKCKCIFEAEYLFKMFPDGKNHVAWTT 205
           L   +Q   Y IKT    +  V+T L++   +      +  A +LF    D K+ + +  
Sbjct: 42  LNELKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILD-KDIILFNI 100

Query: 206 MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
           M  GY+++   + A   F ++   G+  + +TF S+L ACA+  A   G  +H   +  G
Sbjct: 101 MARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLG 160

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
              N+Y+   LI+MYA+C D+++AR + +  E    VS+N++I G+AR     EALSLF+
Sbjct: 161 LNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFR 220

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           ++ A +I+  D T  SV+   A    L+  K +H  + K GF+ Y  VN ALIDM+AK G
Sbjct: 221 ELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCG 280

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
           +L  A  +F  M+ +D  +W+++I   A HG   +A+  F +M+  G+ PD +    +L 
Sbjct: 281 SLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLY 340

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDSMHTRDV- 503
           AC+   ++E G+       K+ G +  +     +V +  + G +++A    D +  +   
Sbjct: 341 ACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATP 400

Query: 504 ITWTALIMGCAQNGKGKEALQFYDQM 529
           I W  L+  C+ +G  + A +  +++
Sbjct: 401 ILWRTLLSACSTHGNVEMAKRVIERI 426



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 117/465 (25%), Positives = 228/465 (49%), Gaps = 19/465 (4%)

Query: 83  LREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRL 142
           +  A  LF++   K+   ++ +  GY+       AF LF ++   G  P  YT  ++L+ 
Sbjct: 80  MDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKA 139

Query: 143 CSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVA 202
           C+    L+ G   H +A+K   + N ++   L++MYA+C  +  A  +F    +    V+
Sbjct: 140 CASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEM-EQPCIVS 198

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
           +  +ITGY+++    +A+  FR+++   +E    T  S++ +CA + A D G  +H  + 
Sbjct: 199 YNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVK 258

Query: 263 SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
             GF+  V V +ALIDM+AKCG L  A  + E   + +  +W++MIV FA  G   +A+S
Sbjct: 259 KKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAIS 318

Query: 323 LFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMY 381
           +F++M    ++ D+ T+  +L  C  + +        +S+    G          ++D+ 
Sbjct: 319 MFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLL 378

Query: 382 AKQGNLDCAFMVFNLMQDKDV-ISWTSLITGCAYHGSYEEALKYFSDMRISGI----CPD 436
            + G+LD A+   + ++ K   I W +L++ C+ HG+ E A +     RI  +      D
Sbjct: 379 GRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKRVIE--RIFELDDAHGGD 436

Query: 437 HVVVSSILSACAELTVLEFGQQVHA--VFLKSGGCSSLSVDNSLVLVYAKCG--CIN-DA 491
           +V++S++ +       +   +++      +K  GCSS+ V+N +   ++  G  C++ + 
Sbjct: 437 YVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVEL 496

Query: 492 NRVFDSMHTR----DVITWTALIMGCAQNGKGKE-ALQFYDQMLA 531
            R  D +         +  T+L+       +GKE  L+++ + LA
Sbjct: 497 RRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLA 541



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 130/267 (48%), Gaps = 7/267 (2%)

Query: 72  TMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRP 131
           T+I  YA    +  A+ +F+E       +++++I GY+      EA  LF ++Q     P
Sbjct: 170 TLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEP 229

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
           +  T+ +V+  C+L G L  G+  H Y  K  FD    V T L+DM+AKC  + +A  +F
Sbjct: 230 TDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIF 289

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
           +     ++  AW+ MI  ++ +G G KAI  F +M+ EGV  ++ TF  +L AC+     
Sbjct: 290 EGM-RVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLV 348

Query: 252 DFG-AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMIV 309
           + G    +    + G    +     ++D+  + G LD A   ++  EI    + W +++ 
Sbjct: 349 EQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLS 408

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDD 336
             +  G     + + K++  R  ++DD
Sbjct: 409 ACSTHG----NVEMAKRVIERIFELDD 431



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 75/179 (41%), Gaps = 35/179 (19%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           +N AL+D F+  G + +A  +FE M  RD   W+ MI A+A                   
Sbjct: 268 VNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFA------------------- 308

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                        +G  ++A  +F +M+ EG RP + T   +L  CS  GL+++G  +  
Sbjct: 309 ------------THGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYF- 355

Query: 158 YAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
           Y++   + +   +     +VD+  +   + EA             + W T+++  S +G
Sbjct: 356 YSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHG 414


>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 758

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 249/669 (37%), Positives = 380/669 (56%), Gaps = 20/669 (2%)

Query: 156 HGYAIKT-CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
           HG+ +KT C D N FV++ LV++YAKC  + +A  +F      +N VAWTT++ G+ QN 
Sbjct: 90  HGHVMKTGCHD-NFFVMSFLVNVYAKCGNMEDARRVFDNMLR-RNVVAWTTLMVGFVQNS 147

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQS 274
               AI  F++M   G   + +T  ++L AC+++ +   G Q H  I+    + +  V S
Sbjct: 148 QPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGS 207

Query: 275 ALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKI 334
           AL  +Y+KCG L+ A +        N +SW S +   A  G   + L LF +M A DIK 
Sbjct: 208 ALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKP 267

Query: 335 DDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVF 394
           ++FT  S L+     + L     V+SL +K G+E    V N+L+ +Y K G +  A  +F
Sbjct: 268 NEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLF 327

Query: 395 NLMQDKDVISWTSLITGCA-------------YHGSYEEALKYFSDMRISGICPDHVVVS 441
           N M D  +++W ++I G A             + GS  EALK FS + +SG+ PD   +S
Sbjct: 328 NRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGS--EALKLFSKLNLSGMKPDLFTLS 385

Query: 442 SILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR 501
           S+LS C+ +  +E G+Q+HA  +K+G  S + V  SL+ +Y+KCG I  A++ F  M TR
Sbjct: 386 SVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTR 445

Query: 502 DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYF 561
            +I WT++I G +Q+G  ++AL  ++ M   G +P+ +TFVG+L ACSHAG+   A  YF
Sbjct: 446 TMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYF 505

Query: 562 ESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGD 621
           E M K Y IKP  DHY CM+D+  R G+L +A   + +M  EP   +W   ++ C+ HG+
Sbjct: 506 EIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGN 565

Query: 622 LELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVE 681
           LELG  AA  L  L+P +   YV L NMY +A ++ED +RVRK+M+   + K    SW+ 
Sbjct: 566 LELGFYAAEQLLSLKPKDPETYVLLLNMYLSAERFEDVSRVRKMMEEEKVGKLKDWSWIS 625

Query: 682 TNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGY--VPDMNFALHNVEEEGKEIGLA 739
              +V+ F +  + HP  + I   +++++  +K  GY  +  +  +    EEE       
Sbjct: 626 IKDKVYSFKTNGKTHPQSSLICKSLEDLLAKVKNVGYEMLESVEISDEEEEEEKTSSPNI 685

Query: 740 YHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFK 799
           YHSEKLA+ FGL  LP  +PIR+ K+  +C D H  +KY+S +  R II++DS R H F 
Sbjct: 686 YHSEKLAITFGLENLPNSSPIRVVKSTLICRDSHNFIKYVSTLAGREIIVKDSKRLHKFA 745

Query: 800 AGNCSCGDY 808
            G CSCG++
Sbjct: 746 NGECSCGNF 754



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 144/491 (29%), Positives = 249/491 (50%), Gaps = 15/491 (3%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  + ++  YA  G + +A+++F+    +N   W++L+ G+        A  +F +M   
Sbjct: 103 FVMSFLVNVYAKCGNMEDARRVFDNMLRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYA 162

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G  PS YTL  VL  CS    L+ G+QFH Y IK   D +A V + L  +Y+KC  + +A
Sbjct: 163 GSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDA 222

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
              F    + KN ++WT+ ++  + NG   K +  F +M    ++ N+FT  S L+ C  
Sbjct: 223 LKTFSRIRE-KNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCE 281

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           + + + G QV+   +  G+E+N+ V+++L+ +Y K G +  A RL    +  + V+WN+M
Sbjct: 282 ILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAM 341

Query: 308 IVGFAR---------QGFHK--EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
           I G A+            H+  EAL LF K++   +K D FT  SVL+  +  + +   +
Sbjct: 342 IAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGE 401

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H+  +KTGF     V+ +LI MY+K G+++ A   F  M  + +I+WTS+ITG + HG
Sbjct: 402 QIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHG 461

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVD 475
             ++AL  F DM ++G+ P+ V    +LSAC+   ++        +  K      ++   
Sbjct: 462 MSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPAMDHY 521

Query: 476 NSLVLVYAKCGCINDANRVFDSM-HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
             +V ++ + G +  A      M +      W+  I GC  +G  +      +Q+L+   
Sbjct: 522 ECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGNLELGFYAAEQLLSLKP 581

Query: 535 KPDYITFVGLL 545
           K D  T+V LL
Sbjct: 582 K-DPETYVLLL 591



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/450 (28%), Positives = 223/450 (49%), Gaps = 26/450 (5%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           +  +L  C    +      VHG ++ +G   N +V S L+++YAKCG+++ ARR+ +   
Sbjct: 70  YVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNML 129

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
             N V+W +++VGF +    K A+ +F++M         +T  +VL+  +S   L     
Sbjct: 130 RRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQ 189

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
            H+ I+K   +    V +AL  +Y+K G L+ A   F+ +++K+VISWTS ++ CA +G+
Sbjct: 190 FHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGA 249

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
             + L+ F +M    I P+   ++S LS C E+  LE G QV+++ +K G  S+L V NS
Sbjct: 250 PVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNS 309

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN-----------GKGKEALQFY 526
           L+ +Y K GCI +A+R+F+ M    ++TW A+I G AQ             +G EAL+ +
Sbjct: 310 LLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLF 369

Query: 527 DQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGR 586
            ++   G KPD  T   +L  CS     E          K  G          +I +  +
Sbjct: 370 SKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKT-GFLSDVIVSTSLISMYSK 428

Query: 587 SGKLIEA-KALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFE------LEPMN 639
            G +  A KA L+  +       W ++++    HG      + A ++FE      + P N
Sbjct: 429 CGSIERASKAFLE--MSTRTMIAWTSMITGFSQHG----MSQQALHIFEDMSLAGVRP-N 481

Query: 640 AMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
           A+ +V + +  S AG    A    ++M+ +
Sbjct: 482 AVTFVGVLSACSHAGMVSQALNYFEIMQKK 511



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 183/373 (49%), Gaps = 22/373 (5%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D    + + + Y+  GRL +A K F+    KN  +W+S +   ++ G  ++   LF +
Sbjct: 200 DFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVKGLRLFVE 259

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M     +P+++TL + L  C     L+ G Q +   IK  ++ N  V   L+ +Y K  C
Sbjct: 260 MIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGC 319

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQN-----------GYGFKAIECFRDMRVEGVE 232
           I EA  LF    D  + V W  MI G++Q              G +A++ F  + + G++
Sbjct: 320 IVEAHRLFNRMDDA-SMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMK 378

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
            + FT  S+L+ C+ + A + G Q+H   + +GF ++V V ++LI MY+KCG ++ A + 
Sbjct: 379 PDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKA 438

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
                    ++W SMI GF++ G  ++AL +F+ M    ++ +  T+  VL+  +    +
Sbjct: 439 FLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMV 498

Query: 353 NNAKSVHSLI-----VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWT 406
           + A +   ++     +K   + Y+     ++DM+ + G L+ A      M  +     W+
Sbjct: 499 SQALNYFEIMQKKYKIKPAMDHYE----CMVDMFVRLGRLEQALNFIKKMNYEPSEFIWS 554

Query: 407 SLITGCAYHGSYE 419
           + I GC  HG+ E
Sbjct: 555 NFIAGCKSHGNLE 567



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 149/296 (50%), Gaps = 8/296 (2%)

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
           F  P +  C  +    +  + VH  ++KTG     FV + L+++YAK GN++ A  VF+ 
Sbjct: 69  FYVPLLQQCLDTR-SYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDN 127

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
           M  ++V++WT+L+ G   +   + A+  F +M  +G  P    +S++L AC+ L  L+ G
Sbjct: 128 MLRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLG 187

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
            Q HA  +K       SV ++L  +Y+KCG + DA + F  +  ++VI+WT+ +  CA N
Sbjct: 188 DQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADN 247

Query: 517 GKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH 576
           G   + L+ + +M+A   KP+  T    L  C      E     + S+   +G +     
Sbjct: 248 GAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVY-SLCIKFGYESNLRV 306

Query: 577 YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNL 632
              ++ L  +SG ++EA  L ++M  +     W A+++     G  ++ E   +NL
Sbjct: 307 RNSLLYLYLKSGCIVEAHRLFNRM-DDASMVTWNAMIA-----GHAQMMELTKDNL 356


>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
          Length = 639

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 232/584 (39%), Positives = 340/584 (58%), Gaps = 11/584 (1%)

Query: 232 ESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF-----EANVYVQSALIDMYAKCGDL 286
            ++  +   ++  C      D G  +H  + + G         ++V ++L  MYAK G L
Sbjct: 61  RADPVSLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLL 120

Query: 287 DSARRLLEYSEIDNEVSWNSMIVGFAR-QGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           D A R+ +   + N V+W +++   A   G  +EAL     M    +  + +T+ SVL  
Sbjct: 121 DDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGA 180

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
             +   L    +VH+  VK G +   FV ++LID Y K G+LD    VF+ M  +D++ W
Sbjct: 181 CTTPGMLT---AVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVW 237

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
            S+I G A  G    A++ F  M+ +G   +   ++S+L AC  + +LE G+QVHA  LK
Sbjct: 238 NSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLK 297

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
                 L + N+L+ +Y KCG + DA+ +F  M  RDVI+W+ ++ G AQNGK  EAL+ 
Sbjct: 298 YD--RDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRV 355

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
           +D M ++G  P+++T VG+LFACSHAGL E+   YF SM +++GI+P  +H+ CM+DLLG
Sbjct: 356 FDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLG 415

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ 645
           R+GKL EA   +  M  EPD+ +W+ LL ACR+H +  L   AA  + +LEP +    V 
Sbjct: 416 RAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYAAREILKLEPDDQGARVL 475

Query: 646 LSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSK 705
           LSN Y+   +W DA +  K M+ RG+RKEPG SW+E   +VH+FI+ D  HP    I  +
Sbjct: 476 LSNTYADLRQWTDAEKPWKAMRDRGMRKEPGRSWIELEKRVHVFIAGDLSHPCSDTIIQE 535

Query: 706 IDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKN 765
           ++ ++  IK  GYVP   F L ++  E KE  L YHSEK+A+ FG +    G PIRI KN
Sbjct: 536 LNRLIGRIKSLGYVPQTEFVLQDLPTEQKEDLLKYHSEKMAIVFGTMHAVDGKPIRIMKN 595

Query: 766 LRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           LR+CGDCH   K +S    R I++RD  RFHHF+ G CSCGDYW
Sbjct: 596 LRICGDCHAFAKLVSKSEGRVIVIRDPVRFHHFQDGACSCGDYW 639



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 186/381 (48%), Gaps = 11/381 (2%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNY-GLDIEAFELFWQMQL 126
           F  N++ + YA  G L +A ++F+  P +N  TW++++   ++  G   EA      M+ 
Sbjct: 105 FVSNSLASMYAKFGLLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRR 164

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
           +G  P+ YT  +VL  C+  G+L      H   +K   D + FV + L+D Y K   +  
Sbjct: 165 DGVAPNAYTFSSVLGACTTPGMLT---AVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDG 221

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
              +F      ++ V W ++I G++Q+G G  AIE F  M+  G  SNQ T  S+L AC 
Sbjct: 222 GRRVFDEMVT-RDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACT 280

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            +   + G QVH  +L   ++ ++ + +AL+DMY KCG L+ A  L       + +SW++
Sbjct: 281 GMVMLEAGRQVHAHVLK--YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWST 338

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKT 365
           M+ G A+ G   EAL +F  M ++ +  +  T   VL  C  + +  +      S+    
Sbjct: 339 MVSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLF 398

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
           G +  +  +N ++D+  + G LD A   +  +  + D + W +L+  C  H +   +L  
Sbjct: 399 GIQPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKN--ASLAA 456

Query: 425 FSDMRISGICPDHVVVSSILS 445
           ++   I  + PD      +LS
Sbjct: 457 YAAREILKLEPDDQGARVLLS 477



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 130/247 (52%), Gaps = 5/247 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D F  +++I AY   G L   +++F+E   ++   W+S+I G++  G  + A ELF +
Sbjct: 200 DSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMR 259

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+  G+  +Q TL +VLR C+   +L+ G Q H + +K  +D +  +   L+DMY KC  
Sbjct: 260 MKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLK--YDRDLILHNALLDMYCKCGS 317

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A+ LF   P  ++ ++W+TM++G +QNG   +A+  F  M+ +GV  N  T   +L 
Sbjct: 318 LEDADALFHRMPQ-RDVISWSTMVSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLF 376

Query: 244 ACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NE 301
           AC+     + G      +    G +      + ++D+  + G LD A   +    ++ + 
Sbjct: 377 ACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDS 436

Query: 302 VSWNSMI 308
           V W +++
Sbjct: 437 VIWRTLL 443



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 68/130 (52%), Gaps = 7/130 (5%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN----ET 93
           L+ AL+D +   G +++A  LF +M  RD  +W+TM++  A +G+  EA ++F+    + 
Sbjct: 304 LHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFDLMKSQG 363

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ-LEGYRPSQYTLDNVLRLCSLKGLLQRG 152
              N  T   +++  S+ GL  + +  F  M+ L G +P +   + ++ L    G L   
Sbjct: 364 VAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLGRAGKLDEA 423

Query: 153 EQF-HGYAIK 161
            +F HG +++
Sbjct: 424 VEFIHGMSLE 433


>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
 gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
          Length = 684

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 230/637 (36%), Positives = 356/637 (55%), Gaps = 3/637 (0%)

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHV-AWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
           L   YA+   +  AE      P  ++ + AW  ++   S+ G    A+  FR +      
Sbjct: 50  LAAAYARVGALDAAESTLAASPSSRSCIPAWNALLAARSRAGSPGAALRVFRALP-SSAR 108

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
            +  TF   LTACA +   D    V     ++G+  +V+V SAL+ +Y++CG +  A R+
Sbjct: 109 PDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGDAIRV 168

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
            +     + V+W++M+ GF   G   EAL ++ +M    +  D+     V+       + 
Sbjct: 169 FDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTGNT 228

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
               SVH   ++ G      +  +L+DMYAK G+ D A  VF +M  ++ +SW +LI+G 
Sbjct: 229 RMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALISGF 288

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
           A +G  +EAL  F +M  SG+ PD   + S L ACA++  L+ G+ +H   L+      +
Sbjct: 289 AQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFILRRLEFQCI 348

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
            +  +++ +Y+KCG +  A ++F+ + +RD++ W A+I  C  +G G +AL  + ++   
Sbjct: 349 -LGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQELNET 407

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIE 592
           G KPD+ TF  LL A SH+GL E  +++F+ M   +GI+P   H  C++DLL RSG + E
Sbjct: 408 GIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLARSGLVEE 467

Query: 593 AKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYST 652
           A  +L  M  EP   +W ALLS C  +  LELGE  A  + E +P +      +SN+Y+ 
Sbjct: 468 ANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKKILESQPEDIGVLALVSNLYAA 527

Query: 653 AGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLL 712
           A KW+    +RKLMK  G +K PG S +E +   H F+ ED+ HP   +I   I ++   
Sbjct: 528 AKKWDKVREIRKLMKDSGSKKVPGYSLIEVHGTRHAFVMEDQSHPQHQEILKMISKLSFE 587

Query: 713 IKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDC 772
           +++ GYVP   F  H+++E+ KE  L+YHSE+LA+AFGLL    G  + I KNLRVCGDC
Sbjct: 588 MRKMGYVPRTEFVYHDLDEDVKEQLLSYHSERLAIAFGLLNTSPGTRLVIIKNLRVCGDC 647

Query: 773 HTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           H A+KYIS +  R I++RD+ RFHHFK G CSCGDYW
Sbjct: 648 HDAIKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 684



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 210/413 (50%), Gaps = 12/413 (2%)

Query: 10  NFSLRCRSKIIGPA---RYTHNVGNSVKP-ASDLNRALVDFSNSGEIDEAGQL----FEK 61
           N  L  RS+   P    R    + +S +P ++    AL   +  G++D A  +    F  
Sbjct: 81  NALLAARSRAGSPGAALRVFRALPSSARPDSTTFTLALTACARLGDLDAAEAVRVRAFAA 140

Query: 62  MSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELF 121
              RD F  + ++  Y+  G + +A ++F+  P K+   WS+++ G+ + G  +EA  ++
Sbjct: 141 GYGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMY 200

Query: 122 WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
            +M+  G    +  +  V++ C+L G  + G   HG  ++    ++  + T LVDMYAK 
Sbjct: 201 SRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKN 260

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
                A  +F+M P  +N V+W  +I+G++QNG+  +A++ FR+M   G++ +     S 
Sbjct: 261 GHFDVARQVFRMMPY-RNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSA 319

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           L ACA V     G  +HG IL    E    + +A++DMY+KCG L+SAR+L       + 
Sbjct: 320 LLACADVGFLKLGKSIHGFILRR-LEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDL 378

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS-VHS 360
           V WN+MI      G   +AL+LF++++   IK D  T+ S+L+  + +  +   K     
Sbjct: 379 VLWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDR 438

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGC 412
           +I + G E  +     ++D+ A+ G ++ A  +   M  +  I  W +L++GC
Sbjct: 439 MITEFGIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSGC 491


>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
 gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
          Length = 574

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 225/554 (40%), Positives = 334/554 (60%)

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           QVH  + ++G   ++ V + L+ M AK  DL +A  L    E  + VSW+ MI GF + G
Sbjct: 21  QVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNG 80

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
            ++     F+++     K D+F+ P V+      + L   + +HS ++K G     FV +
Sbjct: 81  DYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCS 140

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
            L+DMYAK G +D A  +F+ M  KD+++ T +I G A  G   E+   F  MR  G  P
Sbjct: 141 TLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVP 200

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           D V + +I++ACA+L  +   + VH           + +  +++ +YAKCG I+ +  +F
Sbjct: 201 DKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIF 260

Query: 496 DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAE 555
           D M  ++VI+W+A+I     +G+G+EAL+ +  ML  G  P+ ITF+ LL+ACSHAGL +
Sbjct: 261 DRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVD 320

Query: 556 NARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
           +    F  M   YG++P   HY CM+DLLGR+G+L +A  L++ M  E D  +W A L A
Sbjct: 321 DGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGA 380

Query: 616 CRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEP 675
           CR+H  ++L E+AA  L  L+  N   Y+ LSN+Y+ AG+W+D A++R LM  R ++K P
Sbjct: 381 CRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLKKIP 440

Query: 676 GCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKE 735
           G +W+E ++ ++ F + D  H    +IY  +  +   ++ AGYVPD N  LH+V+EE K 
Sbjct: 441 GYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGYVPDTNSVLHDVDEEVKL 500

Query: 736 IGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRF 795
             L  HSEKLA+AFGL+  P G PIRI KNLRVCGDCH+  K +SA+  R II+RD+NRF
Sbjct: 501 GILHAHSEKLAIAFGLIATPDGTPIRITKNLRVCGDCHSFCKLVSAITQRDIIVRDANRF 560

Query: 796 HHFKAGNCSCGDYW 809
           HHFK G CSCGDYW
Sbjct: 561 HHFKEGICSCGDYW 574



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 183/363 (50%), Gaps = 3/363 (0%)

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
           +Q H     T    +  V   L+ M AK K +  A  LF    + ++ V+W+ MI G+ +
Sbjct: 20  KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEE-RDPVSWSVMIGGFVK 78

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYV 272
           NG   +  + FR++   G + + F+ P ++ AC        G  +H  +L +G   + +V
Sbjct: 79  NGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFV 138

Query: 273 QSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI 332
            S L+DMYAKCG +D+A++L +     + V+   MI G+A  G   E+  LF +M     
Sbjct: 139 CSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGF 198

Query: 333 KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM 392
             D     +++N  A    +N A+ VH  +    +     +  A+IDMYAK G++D +  
Sbjct: 199 VPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSRE 258

Query: 393 VFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV 452
           +F+ M+ K+VISW+++I    YHG   EAL+ F  M  SGI P+ +   S+L AC+   +
Sbjct: 259 IFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGL 318

Query: 453 LEFGQQVHAVFLKSGGC-SSLSVDNSLVLVYAKCGCINDANRVFDSMHT-RDVITWTALI 510
           ++ G Q+ ++   S G    +     +V +  + G ++ A R+ ++M   +D   W A +
Sbjct: 319 VDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFL 378

Query: 511 MGC 513
             C
Sbjct: 379 GAC 381



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 185/388 (47%), Gaps = 8/388 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D    N ++   A    L  A  LFN+   ++  +WS +I G+   G     F+ F ++ 
Sbjct: 34  DLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELI 93

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G +P  ++L  V++ C     L  G   H   +K    L+ FV + LVDMYAKC  I 
Sbjct: 94  RAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMID 153

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A+ LF   P  K+ V  T MI GY++ G   ++   F  MR +G   ++    +I+ AC
Sbjct: 154 NAKQLFDRMPK-KDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNAC 212

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A + A +    VH  + +  +  +V + +A+IDMYAKCG +DS+R + +  E  N +SW+
Sbjct: 213 AKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWS 272

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI-VK 364
           +MI  +   G  +EAL LF  M    I  +  T+ S+L   +    +++   + SL+ V 
Sbjct: 273 AMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVS 332

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSY---EE 420
            G          ++D+  + G LD A  ++ N+  +KD   W + +  C  H      E+
Sbjct: 333 YGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWCAFLGACRIHRQVDLAEK 392

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACA 448
           A K    ++     P H ++ S + A A
Sbjct: 393 AAKLLLSLQTQN--PGHYILLSNIYANA 418



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 175/357 (49%), Gaps = 40/357 (11%)

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
           DF   ++  C     ++   K VH+ +  TG      V N L+ M AK  +L  A ++FN
Sbjct: 4   DFFISTLFKCR----NIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFN 59

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
            M+++D +SW+ +I G   +G YE   + F ++  +G  PD+  +  ++ AC +   L  
Sbjct: 60  KMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIM 119

Query: 456 GQQVHAVFLKSGGCSSLSVDN----SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIM 511
           G+ +H+  LK+G    L +DN    +LV +YAKCG I++A ++FD M  +D++T T +I 
Sbjct: 120 GRLIHSTVLKNG----LHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIA 175

Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE-------SM 564
           G A+ GK  E+   +DQM   G  PD +  V ++ AC+  G    AR   +       S+
Sbjct: 176 GYAECGKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSL 235

Query: 565 DKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLEL 624
           D   G          MID+  + G +  ++ + D+M  + +   W A++ A   HG    
Sbjct: 236 DVELG--------TAMIDMYAKCGSIDSSREIFDRM-EQKNVISWSAMIGAYGYHGQ--- 283

Query: 625 GERAANNLFELE------PMNAMPYVQLSNMYSTAGKWEDAARVRKLMK-SRGIRKE 674
             R A  LF +       P N + ++ L    S AG  +D  ++  LM  S G+R +
Sbjct: 284 -GREALELFHMMLNSGIIP-NRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPD 338



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 140/302 (46%), Gaps = 42/302 (13%)

Query: 10  NFSL-----RCRSK---IIGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFE 60
           NFSL      CR     I+G   ++  + N +   + +   LVD ++  G ID A QLF+
Sbjct: 101 NFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFD 160

Query: 61  KMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFEL 120
           +M  +D  T   MIA YA  G+  E+  LF+                             
Sbjct: 161 RMPKKDLVTRTVMIAGYAECGKPNESWVLFD----------------------------- 191

Query: 121 FWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK 180
             QM+ +G+ P +  +  ++  C+  G + +    H Y     + L+  + T ++DMYAK
Sbjct: 192 --QMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAK 249

Query: 181 CKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
           C  I  +  +F    + KN ++W+ MI  Y  +G G +A+E F  M   G+  N+ TF S
Sbjct: 250 CGSIDSSREIFDRM-EQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFIS 308

Query: 241 ILTACAAVSARDFGAQVHGCI-LSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
           +L AC+     D G Q+   + +S G   +V   + ++D+  + G LD A RL+E  E++
Sbjct: 309 LLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVE 368

Query: 300 NE 301
            +
Sbjct: 369 KD 370


>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
 gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
          Length = 739

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 258/738 (34%), Positives = 404/738 (54%), Gaps = 56/738 (7%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N+A+     +G + +A +LF  M  R   T+N M+A Y+ +GRL  A  LF   P  + +
Sbjct: 42  NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNY 101

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           ++++L++  +      +A  LF +M +        T + ++   +  GL+     +   A
Sbjct: 102 SYNTLLHALAVSSSLADARGLFDEMPVR----DSVTYNVMISSHANHGLVSLARHYFDLA 157

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
            +     +A    G++  Y +   + EA  LF    +  + ++W  +++GY Q G   +A
Sbjct: 158 PEK----DAVSWNGMLAAYVRNGRVEEARGLFNSRTEW-DVISWNALMSGYVQWGKMSEA 212

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
            E F  M                        RD    V   I+ SG              
Sbjct: 213 RELFDRM----------------------PGRDV---VSWNIMVSG-------------- 233

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           YA+ GD+  ARRL + + + +  +W +++ G+A+ G  +EA  +F  M  R+      ++
Sbjct: 234 YARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNA----VSW 289

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
            +++  +     ++ AK + +++       +    N ++  YA+ G L+ A  VF+ M  
Sbjct: 290 NAMVAAYIQRRMMDEAKELFNMMPCRNVASW----NTMLTGYAQAGMLEEAKAVFDTMPQ 345

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           KD +SW +++   +  G  EE L+ F +M   G   +    + +LS CA++  LE G Q+
Sbjct: 346 KDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQL 405

Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKG 519
           H   +++G      V N+L+ +Y KCG + DA   F+ M  RDV++W  +I G A++G G
Sbjct: 406 HGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFG 465

Query: 520 KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC 579
           KEAL+ +D M    TKPD IT VG+L ACSH+GL E    YF SM   +G+   P+HY C
Sbjct: 466 KEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTC 525

Query: 580 MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMN 639
           MIDLLGR+G+L EA  L+  M  EPD+T+W ALL A R+H + ELG  AA  +FELEP N
Sbjct: 526 MIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPEN 585

Query: 640 AMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLR 699
           A  YV LSN+Y+++GKW DA ++R +M+ RG++K PG SW+E  ++VH F + D  HP +
Sbjct: 586 AGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEK 645

Query: 700 TDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAP 759
             IY+ ++++ + +K+AGYV   +  LH+VEEE KE  L YHSEKLAVA+G+L +P G P
Sbjct: 646 EKIYAFLEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRP 705

Query: 760 IRIFKNLRVCGDCHTAMK 777
           IR+ KNLRVCGDCH A K
Sbjct: 706 IRVIKNLRVCGDCHNAFK 723



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 193/445 (43%), Gaps = 61/445 (13%)

Query: 33  VKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE 92
           V+ +   N  +   +N G +  A   F+   ++D  +WN M+AAY  +GR+ EA+ LFN 
Sbjct: 128 VRDSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNS 187

Query: 93  TPFKNFFTWSSLIYGYSNYGLDIEAFELF----------WQMQLEGY--RPSQYTLDNVL 140
               +  +W++L+ GY  +G   EA ELF          W + + GY  R        + 
Sbjct: 188 RTEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLF 247

Query: 141 RLCSLKGLLQRGEQFHGYA-------IKTCFDL----NAFVVTGLVDMYAKCKCIFEAEY 189
               ++ +        GYA        +  FD     NA     +V  Y + + + EA+ 
Sbjct: 248 DAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKE 307

Query: 190 LFKMFP------------------------------DGKNHVAWTTMITGYSQNGYGFKA 219
           LF M P                                K+ V+W  M+  YSQ G   + 
Sbjct: 308 LFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEET 367

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           ++ F +M   G   N+  F  +L+ CA ++A + G Q+HG ++ +G+    +V +AL+ M
Sbjct: 368 LQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAM 427

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           Y KCG+++ AR   E  E  + VSWN+MI G+AR GF KEAL +F  M     K DD T 
Sbjct: 428 YFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITL 487

Query: 340 PSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
             VL  C  S +        +S+    G          +ID+  + G L  A    +LM+
Sbjct: 488 VGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEA---HDLMK 544

Query: 399 D----KDVISWTSLITGCAYHGSYE 419
           D     D   W +L+     H + E
Sbjct: 545 DMPFEPDSTMWGALLGASRIHRNPE 569



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 213/457 (46%), Gaps = 54/457 (11%)

Query: 34  KPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNET 93
           +  S  N  L  +S +G +  A  LF  +   D +++NT++ A A S  L +A+ LF+E 
Sbjct: 67  RSTSTYNAMLAGYSANGRLPLAASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEM 126

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQ--- 150
           P ++  T++ +I  ++N+GL   A   F         P +  +       S  G+L    
Sbjct: 127 PVRDSVTYNVMISSHANHGLVSLARHYF------DLAPEKDAV-------SWNGMLAAYV 173

Query: 151 ---RGEQFHG-YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTM 206
              R E+  G +  +T +D+ ++    L+  Y +   + EA  LF   P G++ V+W  M
Sbjct: 174 RNGRVEEARGLFNSRTEWDVISW--NALMSGYVQWGKMSEARELFDRMP-GRDVVSWNIM 230

Query: 207 ITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA-----VSARDFGAQVHGCI 261
           ++GY++ G   +A   F    V  V    FT+ ++++  A       + R F A      
Sbjct: 231 VSGYARRGDMVEARRLFDAAPVRDV----FTWTAVVSGYAQNGMLEEARRVFDAMPERNA 286

Query: 262 LSSGFEANVYVQSALIDM----------------------YAKCGDLDSARRLLEYSEID 299
           +S       Y+Q  ++D                       YA+ G L+ A+ + +     
Sbjct: 287 VSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQK 346

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           + VSW +M+  +++ G  +E L LF +M      ++   +  VL+  A    L     +H
Sbjct: 347 DAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLH 406

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
             +++ G+    FV NAL+ MY K GN++ A   F  M+++DV+SW ++I G A HG  +
Sbjct: 407 GRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGK 466

Query: 420 EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
           EAL+ F  MR +   PD + +  +L+AC+   ++E G
Sbjct: 467 EALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKG 503



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 165/352 (46%), Gaps = 30/352 (8%)

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
            E  V   +  I  + + G +  A RL       +  ++N+M+ G++  G    A SLF+
Sbjct: 34  LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
            +     + D+++Y ++L+  A +  L +A+ +   +       Y    N +I  +A  G
Sbjct: 94  AIP----RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTY----NVMISSHANHG 145

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
            +  A   F+L  +KD +SW  ++     +G  EEA   F+    S    D +  ++++S
Sbjct: 146 LVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFN----SRTEWDVISWNALMS 201

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
              +   +    +   +F +  G   +S  N +V  YA+ G + +A R+FD+   RDV T
Sbjct: 202 GYVQWGKM---SEARELFDRMPGRDVVSW-NIMVSGYARRGDMVEARRLFDAAPVRDVFT 257

Query: 506 WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMD 565
           WTA++ G AQNG  +EA + +D M  R    + +++  ++ A     + + A+  F  M 
Sbjct: 258 WTAVVSGYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKELFNMM- 312

Query: 566 KVYGIKPGPD--HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
                 P  +   +  M+    ++G L EAKA+ D M  + DA  W A+L+A
Sbjct: 313 ------PCRNVASWNTMLTGYAQAGMLEEAKAVFDTM-PQKDAVSWAAMLAA 357


>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 775

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 256/777 (32%), Positives = 399/777 (51%), Gaps = 108/777 (13%)

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
           TLD++L+ C      +  +Q     I T    + +  + L++  +    +    Y  ++F
Sbjct: 5   TLDSLLQSCKCP---RHFKQLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIF 61

Query: 195 PD--GKNHVAWTTMITG--YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
                 N   W T++    Y QN    +A+  ++       + + +T+P +L  CAA  +
Sbjct: 62  NHLRNPNTFTWNTIMRAHLYLQNS-PHQALLHYKLFLASHAKPDSYTYPILLQCCAARVS 120

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              G Q+H   +SSGF+ +VYV++ L+++YA CG + SARR+ E S + + VSWN+++ G
Sbjct: 121 EFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAG 180

Query: 311 -------------------------------FARQGFHKEALSLFKKMHARDIKIDDFTY 339
                                          F R+G  ++A  +F  +  R+   D  ++
Sbjct: 181 YVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRER--DMVSW 238

Query: 340 PSVLNCFASN-----------------------------------IDLNNAKSVHSLIVK 364
            ++++C+  N                                   +++   + VH L VK
Sbjct: 239 SAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVK 298

Query: 365 TGFEGYKFVNNALIDMYA--------------------------------KQGNLDCAFM 392
            G E Y  + NALI +Y+                                + G++  A M
Sbjct: 299 VGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEM 358

Query: 393 VFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV 452
           +F  M +KDV+SW+++I+G A H  + EAL  F +M++ G+ PD   + S +SAC  L  
Sbjct: 359 LFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLAT 418

Query: 453 LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMG 512
           L+ G+ +HA   ++    ++ +  +L+ +Y KCGC+ +A  VF +M  + V TW A+I+G
Sbjct: 419 LDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILG 478

Query: 513 CAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKP 572
            A NG  +++L  +  M   GT P+ ITF+G+L AC H GL  + R YF SM   + I+ 
Sbjct: 479 LAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEA 538

Query: 573 GPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNL 632
              HY CM+DLLGR+G L EA+ L+D M   PD   W ALL ACR H D E+GER    L
Sbjct: 539 NIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKL 598

Query: 633 FELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISE 692
            +L+P +   +V LSN+Y++ G W +   +R +M   G+ K PGCS +E N  VH F++ 
Sbjct: 599 IQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAG 658

Query: 693 DRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLL 752
           D+ HP   DI   +D +   +K  GYVP  +    +++EE KE  L  HSEKLAVAFGL+
Sbjct: 659 DKTHPQINDIEHMLDVVAAKLKIEGYVPTTSEVSLDIDEEEKETALFRHSEKLAVAFGLI 718

Query: 753 TLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           T+    PIR+ KNLR+C DCHT +K IS  + R I++RD +RFHHFK G CSC D+W
Sbjct: 719 TISPPTPIRVTKNLRICNDCHTVVKLISKAFDRDIVVRDRHRFHHFKHGACSCMDFW 775



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 133/525 (25%), Positives = 241/525 (45%), Gaps = 92/525 (17%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D +  NT++  YA  G +  A+++F E+P  +  +W++L+ GY   G   EA  +F  
Sbjct: 137 DGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVF-- 194

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
                                 +G+ +R               N      ++ ++ +  C
Sbjct: 195 ----------------------EGMPER---------------NTIASNSMIALFGRKGC 217

Query: 184 IFEAEYLFK-MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
           + +A  +F  +    ++ V+W+ M++ Y QN  G +A+  F +M+  GV  ++    S L
Sbjct: 218 VEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSAL 277

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL-EYSEIDNE 301
           +AC+ V   + G  VHG  +  G E  V +++ALI +Y+ CG++  ARR+  +  E+ + 
Sbjct: 278 SACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDL 337

Query: 302 VSWNSMIVGFARQG--------FH-----------------------KEALSLFKKMHAR 330
           +SWNSMI G+ R G        F+                        EAL+LF++M   
Sbjct: 338 ISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLH 397

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
            ++ D+    S ++       L+  K +H+ I +   +    ++  LIDMY K G ++ A
Sbjct: 398 GVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENA 457

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
             VF  M++K V +W ++I G A +GS E++L  F+DM+ +G  P+ +    +L AC  +
Sbjct: 458 LEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHM 517

Query: 451 TVLE-----FGQQVH----AVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM-HT 500
            ++      F   +H       +K  GC        +V +  + G + +A  + DSM   
Sbjct: 518 GLVNDGRHYFNSMIHEHKIEANIKHYGC--------MVDLLGRAGLLKEAEELIDSMPMA 569

Query: 501 RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
            DV TW AL+  C ++   +   +   +++    +PD+  F  LL
Sbjct: 570 PDVATWGALLGACRKHRDNEMGERLGRKLIQ--LQPDHDGFHVLL 612



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 124/489 (25%), Positives = 230/489 (47%), Gaps = 48/489 (9%)

Query: 35  PASDL---NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN 91
           P  DL   N  L  +  +GE++EA ++FE M +R+    N+MIA +   G + +A+++FN
Sbjct: 167 PVLDLVSWNTLLAGYVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFN 226

Query: 92  --ETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLL 149
                 ++  +WS+++  Y    +  EA  LF +M+  G    +  + + L  CS    +
Sbjct: 227 GVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNV 286

Query: 150 QRGEQFHGYAIK------------------TC---------FD-----LNAFVVTGLVDM 177
           + G   HG A+K                  +C         FD     L+      ++  
Sbjct: 287 EMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISG 346

Query: 178 YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
           Y +C  I +AE LF   P+ K+ V+W+ MI+GY+Q+    +A+  F++M++ GV  ++  
Sbjct: 347 YLRCGSIQDAEMLFYSMPE-KDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETA 405

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
             S ++AC  ++  D G  +H  I  +  + NV + + LIDMY KCG +++A  +    E
Sbjct: 406 LVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAME 465

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
                +WN++I+G A  G  +++L++F  M       ++ T+  VL        +N+ + 
Sbjct: 466 EKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRH 525

Query: 358 -VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM-QDKDVISWTSLITGCAYH 415
             +S+I +   E        ++D+  + G L  A  + + M    DV +W +L+  C  H
Sbjct: 526 YFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKH 585

Query: 416 GSYEEALKYFSDMRISGICPD----HVVVSSILSACAEL-TVLEF-GQQVHAVFLKSGGC 469
              E   +     ++  + PD    HV++S+I ++      VLE  G       +K+ GC
Sbjct: 586 RDNEMGERL--GRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGC 643

Query: 470 SSLSVDNSL 478
           S +  + ++
Sbjct: 644 SMIEANGTV 652



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 167/350 (47%), Gaps = 8/350 (2%)

Query: 23  ARYTHN--VGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDR-DGFTWNTMIAAYA 78
            R+ H   V   V+    L  AL+  +S+ GEI +A ++F+   +  D  +WN+MI+ Y 
Sbjct: 289 GRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYL 348

Query: 79  NSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDN 138
             G +++A+ LF   P K+  +WS++I GY+ +    EA  LF +MQL G RP +  L +
Sbjct: 349 RCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVS 408

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
            +  C+    L  G+  H Y  +    +N  + T L+DMY KC C+  A  +F    + K
Sbjct: 409 AISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEE-K 467

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ-V 257
               W  +I G + NG   +++  F DM+  G   N+ TF  +L AC  +   + G    
Sbjct: 468 GVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYF 527

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV-SWNSMIVGFARQGF 316
           +  I     EAN+     ++D+  + G L  A  L++   +  +V +W +++    +   
Sbjct: 528 NSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRD 587

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           ++    L +K+       D F +  + N +AS  +  N   +  ++ + G
Sbjct: 588 NEMGERLGRKLIQLQPDHDGF-HVLLSNIYASKGNWGNVLEIRGIMAQHG 636


>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
 gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
          Length = 879

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 262/757 (34%), Positives = 415/757 (54%), Gaps = 20/757 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           + D +   T++  Y     + +A+K+F+    K    W+++I  Y+      +A ++F+ 
Sbjct: 132 ESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYA 191

Query: 124 MQLEGYRPSQYTLDNVLRLCS-LKGL-------LQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           M LEG +  + T   VL  CS LK L       L   E+ H +   + F       T LV
Sbjct: 192 MLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSF------ATALV 245

Query: 176 DMYAKCKCIFEAEYLFKMFPDGK-NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           + Y  C    + E  F+ F   +   +  T MIT Y+Q     +A+E F+ M +EGV+ +
Sbjct: 246 NFYGSCG---DLEQAFRAFSRHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLD 302

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
           +    ++L AC+     + G  +HG +    F+ +V   +ALI+MY KCG L+ A  +  
Sbjct: 303 RIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFR 362

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
             +  + +SWN++I    +   H EAL L   M    +K D  ++ + L   A++  L  
Sbjct: 363 SMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAK 422

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
            + +HS IV++G +    ++NA++DMY    + D A  VF  M+ +D +SW ++IT  A 
Sbjct: 423 GRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITAYAA 482

Query: 415 HGSYE-EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
                 EAL  F  M++ G  PD +   + LSACA    L  G+ +H    ++G  S+++
Sbjct: 483 QPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMT 542

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
           V N+++ +YAK G +  A ++F  M   DVI+W  +I   AQ+G   + L+F+ +M   G
Sbjct: 543 VANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEG 602

Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKVY-GIKPGPDHYACMIDLLGRSGKLIE 592
             P+ +TFV ++ ACSH GL ++    F S+   +  I P  +HY CM+DL+ R+GKL  
Sbjct: 603 KLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDA 662

Query: 593 AKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYST 652
           A+  +     +PD  +   +L A +VH D+E   ++A +L EL P  +  YV LSN+Y  
Sbjct: 663 AEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDE 722

Query: 653 AGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLL 712
            GK ++ A++R+LM  + IRKEP  S +    +VH F + D  +    +I  +++ + L 
Sbjct: 723 VGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPEILEELERLSLE 782

Query: 713 IKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDC 772
           + +AGY PD    LH+V +E K+  L+YHSEKLA+AFGL++   G  +RI KNLRVCGDC
Sbjct: 783 MAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLRIIKNLRVCGDC 842

Query: 773 HTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           HTA K+IS +  R I++RDS+RFHHF  G CSCGDYW
Sbjct: 843 HTATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879



 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 172/564 (30%), Positives = 279/564 (49%), Gaps = 14/564 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           DR  F  + ++  Y + G L +AK  F+  P ++  TW+ LI  +   G   +A  LF  
Sbjct: 30  DRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARLIRAHGQIGDSEQALHLFRS 89

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKG-LLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           MQLEG  P       VL  CS    LL+ G + HG    T  + + +V T L+ MY KC 
Sbjct: 90  MQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCS 149

Query: 183 CIFEAEYLFKMFPDGKNH---VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFP 239
            + +A  +F    DG  H   V W  MIT Y+Q  +  +AI+ F  M +EGV++ + TF 
Sbjct: 150 SVEDARKVF----DGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFI 205

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFE--ANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
            +L AC+ +   +    V  C+     +   +    +AL++ Y  CGDL+ A R      
Sbjct: 206 GVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQAFRAFSRHR 265

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
           ++  ++  +MI  + ++    EAL LFK M    +K+D     +VLN  +    L   + 
Sbjct: 266 LELILA-TAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRM 324

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           +H  + +  F+ +    NALI+MY K G+L+ A  VF  MQ +DVISW ++I     H  
Sbjct: 325 IHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQ 384

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
           + EAL     M++ G+  D +   + L  CA    L  G+ +H+  ++SG  + + +DN+
Sbjct: 385 HPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMIHSWIVESGIKADVMLDNA 444

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMG-CAQNGKGKEALQFYDQMLARGTKP 536
           ++ +Y  C   +DA+RVF +M  RD ++W A+I    AQ     EAL  + QM   G  P
Sbjct: 445 ILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMP 504

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           D I+FV  L AC+        +   + + +  G++        ++++  +SG L+ A+ +
Sbjct: 505 DVISFVAALSACAAQASLAEGKLLHDRIRET-GLESNMTVANAVLNMYAKSGSLVLARKM 563

Query: 597 LDQMVGEPDATVWKALLSACRVHG 620
             +M   PD   W  ++SA   HG
Sbjct: 564 FGKM-PLPDVISWNGMISAFAQHG 586



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 227/474 (47%), Gaps = 15/474 (3%)

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
           L  G++ H    K+  D   F+   LV MY  C  + +A+  F   P  ++ + W  +I 
Sbjct: 14  LDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP-VQDALTWARLIR 72

Query: 209 GYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA-VSARDFGAQVHGCILSSGFE 267
            + Q G   +A+  FR M++EGV      F ++L AC+A     + G ++HG +  +  E
Sbjct: 73  AHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAME 132

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM 327
           ++ YV + L+ MY KC  ++ AR++ +       V WN+MI  +A+Q  H++A+ +F  M
Sbjct: 133 SDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAM 192

Query: 328 HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN--NALIDMYAKQG 385
               +K +  T+  VL+  +   DL  AK V   + +   +     +   AL++ Y   G
Sbjct: 193 LLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCG 252

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
           +L+ AF  F+     ++I  T++IT       ++EAL+ F  M + G+  D +   ++L+
Sbjct: 253 DLEQAFRAFS-RHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLN 311

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
           AC+    LE G+ +H    +      ++  N+L+ +Y KCG + +A  VF SM  RDVI+
Sbjct: 312 ACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVIS 371

Query: 506 WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENAR----WYF 561
           W  +I    Q+ +  EAL     M   G K D I+FV  L  C+ +      R    W  
Sbjct: 372 WNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMIHSWIV 431

Query: 562 ESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
           ES     GIK        ++D+ G      +A  +   M    D   W A+++A
Sbjct: 432 ES-----GIKADVMLDNAILDMYGSCKSTDDASRVFRAMKAR-DQVSWNAMITA 479



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 201/474 (42%), Gaps = 48/474 (10%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           +  +L   A   + D G +VH  I  S  +   ++   L+ MY  CG L  A+   +   
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAK 356
           + + ++W  +I    + G  ++AL LF+ M    +   +  + +VL  C A    L   +
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H ++  T  E   +V+  L+ MY K  +++ A  VF+ ++ K V+ W ++IT  A   
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQD 180

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVF--LKSGGCSSLSV 474
            +E+A++ F  M + G+  + +    +L AC++L  LE  + V       +       S 
Sbjct: 181 HHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSF 240

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
             +LV  Y  CG +  A R F S H  ++I  TA+I    Q  +  EAL+ +  ML  G 
Sbjct: 241 ATALVNFYGSCGDLEQAFRAF-SRHRLELILATAMITQYTQRERWDEALELFKVMLLEGV 299

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKV---YGIKPGPDHYACMIDLLGRSGKLI 591
           K D I  + +L ACS     E  R     M ++     +  G      +I++ G+ G L 
Sbjct: 300 KLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGN----ALINMYGKCGSLE 355

Query: 592 EAKALLDQMVGEPDATVWKALLSACRVHGD-------LELGERAANNLFELEPMNAMPY- 643
           EA  +   M    D   W  +++A   H         L L +       ++  +NA+P  
Sbjct: 356 EAVEVFRSM-QHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLC 414

Query: 644 ------------------------VQLSN----MYSTAGKWEDAARVRKLMKSR 669
                                   V L N    MY +    +DA+RV + MK+R
Sbjct: 415 AASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKAR 468



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 137/308 (44%), Gaps = 38/308 (12%)

Query: 17  SKIIGPARYTHN--VGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTM 73
           S+ +   R  H+  V + +K    L+ A++D + +    D+A ++F  M  RD  +WN M
Sbjct: 417 SEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAM 476

Query: 74  IAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQ 133
           I AYA   RL                                EA  LF QMQL G+ P  
Sbjct: 477 ITAYAAQPRLSS------------------------------EALLLFQQMQLHGFMPDV 506

Query: 134 YTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKM 193
            +    L  C+ +  L  G+  H    +T  + N  V   +++MYAK   +  A  +F  
Sbjct: 507 ISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGK 566

Query: 194 FPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDF 253
            P   + ++W  MI+ ++Q+G+  + +  FR M  EG   N  TF S+++AC+       
Sbjct: 567 MP-LPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKD 625

Query: 254 GAQVHGCILSSGFEANVYVQS--ALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
           G Q+   +L      +   +    ++D+ A+ G LD+A + +  + +  +   +S ++G 
Sbjct: 626 GVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGA 685

Query: 312 ARQGFHKE 319
           ++   HK+
Sbjct: 686 SK--VHKD 691


>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 595

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 214/520 (41%), Positives = 336/520 (64%), Gaps = 5/520 (0%)

Query: 295 YSEIDNEVS---WNSMIVGFARQGFHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNI 350
           +S+I+  ++   WN++I G+A  G    A+SL+++M A   ++ D  TYP +L       
Sbjct: 76  FSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMA 135

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           D+   +++HS+++++GF    +V N+L+ +YA  G++  A+ VF+ M +KD+++W S+I 
Sbjct: 136 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 195

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
           G A +G  EEAL  +++M + GI PD   + S+LSACA++  L  G++ H   +K G   
Sbjct: 196 GFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTR 255

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
           +L   N L+ +YA+CG + +A  +FD M  ++ ++WT+LI+G A NG GKEA++ +  M 
Sbjct: 256 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNME 315

Query: 531 AR-GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGK 589
           ++ G  P  ITFVG+L+ACSH G+ +    YF  M + Y I+P  +H+ CM+DLL R+G+
Sbjct: 316 SKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQ 375

Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNM 649
           + +A   + +M  +P+  +W+ LL AC VHGD +L E A   + +LEP ++  YV LSNM
Sbjct: 376 VKKAYEYILKMPMQPNVVIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVLLSNM 435

Query: 650 YSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEI 709
           Y++  +W D  ++RK M   G+RK PG S VE  ++VH F+  D+ HP    IY+K+ E+
Sbjct: 436 YASEQRWSDVQKIRKQMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAKLKEM 495

Query: 710 MLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVC 769
              ++  GYVP ++    +VEEE KE  L YHSEK+A+AF L++ P+  PIR+ KNL+VC
Sbjct: 496 TDRLRLEGYVPQISNVYVDVEEEEKENALVYHSEKIAIAFMLISTPERWPIRVVKNLKVC 555

Query: 770 GDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            DCH A+K +S VY R I++RD +RFHHFK G+CSC DYW
Sbjct: 556 ADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 191/368 (51%), Gaps = 30/368 (8%)

Query: 86  AKKLFN--ETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGY-RPSQYTLDNVLRL 142
           A K+F+  E P  N F W++LI GY+  G  + A  L+ +M+  G+  P  +T   +L+ 
Sbjct: 72  AHKVFSKIEKPI-NVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKA 130

Query: 143 CSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVA 202
                 ++ GE  H   I++ F    +V   L+ +YA C  +  A  +F   P+ K+ VA
Sbjct: 131 VGKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE-KDLVA 189

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
           W ++I G+++NG   +A+  + +M ++G++ + FT  S+L+ACA + A   G + H  ++
Sbjct: 190 WNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMI 249

Query: 263 SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
             G   N++  + L+D+YA+CG ++ A+ L +     N VSW S+IVG A  G  KEA+ 
Sbjct: 250 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIE 309

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA------ 376
           LFK M +++          +L C  + + +  A S H  +VK GFE ++ ++        
Sbjct: 310 LFKNMESKE---------GLLPCEITFVGILYACS-HCGMVKEGFEYFRRMSEEYKIEPR 359

Query: 377 ------LIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
                 ++D+ A+ G +  A+  +  +    +V+ W +L+  C  HG  +  L   + M+
Sbjct: 360 IEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHG--DSDLAELARMK 417

Query: 430 ISGICPDH 437
           I  + P+H
Sbjct: 418 ILQLEPNH 425



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 136/272 (50%), Gaps = 31/272 (11%)

Query: 56  GQLFEKMSDRDGF-----TWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSN 110
           G+    +  R GF       N+++  YAN G +  A K+F++ P K+   W+S+I G++ 
Sbjct: 140 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 199

Query: 111 YGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV 170
            G   EA  L+ +M L+G +P  +T+ ++L  C+  G L  G++FH Y IK     N   
Sbjct: 200 NGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHS 259

Query: 171 VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV-E 229
              L+D+YA+C  + EA+ LF    D KN V+WT++I G + NG G +AIE F++M   E
Sbjct: 260 SNVLLDLYARCGRVEEAKTLFDEMVD-KNSVSWTSLIVGLAVNGLGKEAIELFKNMESKE 318

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF------------EANVYVQSALI 277
           G+   + TF  IL AC+           H  ++  GF            E  +     ++
Sbjct: 319 GLLPCEITFVGILYACS-----------HCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMV 367

Query: 278 DMYAKCGDLDSA-RRLLEYSEIDNEVSWNSMI 308
           D+ A+ G +  A   +L+     N V W +++
Sbjct: 368 DLLARAGQVKKAYEYILKMPMQPNVVIWRTLL 399



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 41/175 (23%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF-----T 100
           ++  G ++EA  LF++M D++  +W ++I   A +G  +EA +LF     K        T
Sbjct: 267 YARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEIT 326

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
           +  ++Y  S+ G+  E FE F +M        +Y ++             R E F     
Sbjct: 327 FVGILYACSHCGMVKEGFEYFRRMS------EEYKIE------------PRIEHF----- 363

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEA-EYLFKMFPDGKNHVAWTTMITGYSQNG 214
             C          +VD+ A+   + +A EY+ KM P   N V W T++   + +G
Sbjct: 364 -GC----------MVDLLARAGQVKKAYEYILKM-PMQPNVVIWRTLLGACTVHG 406


>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Vitis vinifera]
          Length = 704

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 238/593 (40%), Positives = 363/593 (61%), Gaps = 2/593 (0%)

Query: 218 KAIECFRDMRVEGV-ESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
           +A+E F  + + G  + +  T+ ++++AC  + +     +V   +++SG + + Y+++ +
Sbjct: 113 EALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRV 172

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           + M+ KCG +  ARRL +     N +SWN++I G    G + EA  LF  M         
Sbjct: 173 LLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGS 232

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
             + +++   A    +   + +HS  +KTG  G  FV  ALIDMY+K G+++ A  VF+ 
Sbjct: 233 RMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQ 292

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
           M +K  + W S+I G A HG  EEAL  + +MR SG+  D+   S I+  CA L  LE  
Sbjct: 293 MPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHA 352

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
           +Q HA  ++ G    +  + +LV +Y+K G I DA  VFD M  ++VI+W ALI G   +
Sbjct: 353 KQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNH 412

Query: 517 GKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH 576
           G+G EA++ +++ML  G  P+++TF+ +L ACS++GL++     FESM + + IKP   H
Sbjct: 413 GRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMH 472

Query: 577 YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELE 636
           YACMI+LLGR G L EA AL+     +P   +W ALL+ACRVH + ELG+ AA  L+ + 
Sbjct: 473 YACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMG 532

Query: 637 PMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGH 696
           P     YV L N+Y+ +G+ E+AA V + +K RG+R  P CSW+E   Q + FIS D+ H
Sbjct: 533 PEKLSNYVVLLNIYNRSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCH 592

Query: 697 PLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQ 756
               +IY K+DE+ML I + GYVP   F L +V+E+ + + L YHSEKLA+AFGL+    
Sbjct: 593 AQSKEIYQKLDELMLEISKHGYVPQDKFLLPDVDEQEERV-LLYHSEKLAIAFGLINTSD 651

Query: 757 GAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             P++I ++ R+CGDCH+A+K I+ V  R I++RD++RFHHFK G+CSCGDYW
Sbjct: 652 WTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 143/493 (29%), Positives = 241/493 (48%), Gaps = 51/493 (10%)

Query: 116 EAFELFWQMQLEG-YRPSQYTLDNVLRLC----SLKGLLQRGEQFHGYAIKTCFDLNAFV 170
           EA ELF  ++L G Y     T D ++  C    S++G+    ++   Y I +  D + ++
Sbjct: 113 EALELFEILELNGAYDMDSETYDALVSACIGLKSIRGV----KKVFNYMINSGLDPDEYL 168

Query: 171 VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG 230
              ++ M+ KC  + +A  LF   P+ KN ++W T+I G    G  F+A   F  M  + 
Sbjct: 169 RNRVLLMHVKCGMMIDARRLFDEMPE-KNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDF 227

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
            ++    F +++ A A +     G Q+H C L +G   +V+V  ALIDMY+KCG ++ A+
Sbjct: 228 SDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQ 287

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
            + +       V WNS+I G+A  G+ +EALS++ +M    +KID+FT+  ++   A   
Sbjct: 288 CVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLA 347

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
            L +AK  H+ +V+ GF      N AL+D+Y+K G ++ A  VF++M  K+VISW +LI 
Sbjct: 348 SLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIA 407

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
           G   HG   EA++ F  M   G+ P+HV   ++LSAC+   + + G +            
Sbjct: 408 GYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWE------------ 455

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEAL--QFYDQ 528
                                  +F+SM     I   A+   C     G+E L  + +  
Sbjct: 456 -----------------------IFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFAL 492

Query: 529 MLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP-DHYACMIDLLGRS 587
           +     KP    +  LL AC      E  ++   + +K+YG+ P    +Y  ++++  RS
Sbjct: 493 IKDAPFKPTVNMWAALLTACRVHKNFELGKF---AAEKLYGMGPEKLSNYVVLLNIYNRS 549

Query: 588 GKLIEAKALLDQM 600
           G+L EA A++  +
Sbjct: 550 GRLEEAAAVIQTL 562



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 196/377 (51%), Gaps = 5/377 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D +  N ++  +   G + +A++LF+E P KN  +W+++I G  + G   EAF LF  
Sbjct: 163 DPDEYLRNRVLLMHVKCGMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLM 222

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M  +           ++R  +  GL+  G Q H  ++KT    + FV   L+DMY+KC  
Sbjct: 223 MWQDFSDAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGS 282

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I +A+ +F   P+ K  V W ++I GY+ +GY  +A+  + +MR  GV+ + FTF  I+ 
Sbjct: 283 IEDAQCVFDQMPE-KTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIR 341

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
            CA +++ +   Q H  ++  GF  ++   +AL+D+Y+K G ++ A+ + +     N +S
Sbjct: 342 ICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVIS 401

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLI 362
           WN++I G+   G   EA+ +F++M    +  +  T+ +VL+ C  S +     +   S+ 
Sbjct: 402 WNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMS 461

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEA 421
                +        +I++  ++G LD AF +      K  ++ W +L+T C  H ++E  
Sbjct: 462 RDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFE-- 519

Query: 422 LKYFSDMRISGICPDHV 438
           L  F+  ++ G+ P+ +
Sbjct: 520 LGKFAAEKLYGMGPEKL 536



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 68/172 (39%), Gaps = 33/172 (19%)

Query: 40  NRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF 98
           N ALVD +S  G I++A  +F+ M  ++  +WN +IA Y N GR                
Sbjct: 371 NTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGR---------------- 414

Query: 99  FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG-EQFHG 157
                           +EA E+F +M  EG  P+  T   VL  CS  GL  RG E F  
Sbjct: 415 ---------------GVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFES 459

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
            +        A     ++++  +   + EA  L K  P       W  ++T 
Sbjct: 460 MSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTA 511


>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 662

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 244/669 (36%), Positives = 378/669 (56%), Gaps = 19/669 (2%)

Query: 143 CSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVA 202
           C+ K  L   +  H + +K+   L +F    L+D Y KC  I EA  LF   P+ ++ V 
Sbjct: 11  CTNKKSLTTLKSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMPN-RHIVT 68

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
           W +MI+ +   G   +AIE + +M  EGV  + +TF +I  A + +     G + HG  +
Sbjct: 69  WNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAV 128

Query: 263 SSGFE-ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEAL 321
             GFE ++ +V + ++DMYAK G +  AR + +     + V + ++IVG+ + G   EAL
Sbjct: 129 VLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDGEAL 188

Query: 322 SLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMY 381
            +F+ M    IK +++T  SVL    +  DL N K +H L+VK G E       +L+ MY
Sbjct: 189 EVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMY 248

Query: 382 AKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVS 441
           +K   ++ +  VFN +     ++WTS I G   +G  E AL  F +M    I P+H  +S
Sbjct: 249 SKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLS 308

Query: 442 SILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR 501
           SIL AC+ L +LE G+Q+HAV +K G   +  VD +L+ +Y KCG +  A  VFDS+   
Sbjct: 309 SILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTEL 368

Query: 502 DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYF 561
           D+++   +I   AQNG G EAL+ ++++   G +P+ +TF+ +L AC++AGL E     F
Sbjct: 369 DIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIF 428

Query: 562 ESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGD 621
             +   + I+   DHY CMIDLLGR+ +  EA  L+++    PD   W+ LL+AC++HG+
Sbjct: 429 SLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEG-KNPDVIQWRTLLNACKIHGE 487

Query: 622 LELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVE 681
           +E+ E+    + +  P +   ++ L+N+Y++AGKW++   ++   +   ++K P  SWV+
Sbjct: 488 VEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVD 547

Query: 682 TNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYH 741
            + +VH F++ D  HP   +I   + E++  +   GY PD  F L ++EEE K   L YH
Sbjct: 548 IDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISALYYH 607

Query: 742 SEKLAVAFGLL-TLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKA 800
           SEKLA+AF L  T  +   IRIFKNLRVCGD              +II RD+ RFHHFK 
Sbjct: 608 SEKLAIAFALWKTCGKNTAIRIFKNLRVCGD--------------YIIARDAKRFHHFKG 653

Query: 801 GNCSCGDYW 809
           G CSC DYW
Sbjct: 654 GICSCKDYW 662



 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 150/487 (30%), Positives = 264/487 (54%), Gaps = 12/487 (2%)

Query: 52  IDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNY 111
           I ++G LF        F  + +I  Y     + EA+KLF+E P ++  TW+S+I  + + 
Sbjct: 27  ILKSGSLF-------SFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSR 79

Query: 112 GLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDL-NAFV 170
           G   EA EL+  M  EG  P  YT   + +  S  G+ + G++ HG A+   F++ + FV
Sbjct: 80  GKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFV 139

Query: 171 VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG 230
            TG+VDMYAK   + +A ++F    D K+ V +T +I GY+Q+G   +A+E F DM    
Sbjct: 140 ATGIVDMYAKFGKMKDARFVFDRVLD-KDVVLFTALIVGYNQHGLDGEALEVFEDMVGSR 198

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           ++ N++T  S+L +C  +     G  +HG ++  G E+ V  Q++L+ MY+KC  ++ + 
Sbjct: 199 IKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSI 258

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
           ++       + V+W S IVG  + G  + ALS+F++M    I  + FT  S+L+  +S  
Sbjct: 259 KVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLA 318

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
            L   + +H++ VK G +G KFV+ ALI +Y K GN++ A  VF+ + + D++S  ++I 
Sbjct: 319 MLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIY 378

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
             A +G   EAL+ F  ++  G+ P+ V   SIL AC    ++E G Q+ ++ +++    
Sbjct: 379 AYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSL-IRNNHSI 437

Query: 471 SLSVDN--SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
            L+ D+   ++ +  +     +A  + +     DVI W  L+  C  +G+ + A +F  +
Sbjct: 438 ELTRDHYTCMIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKK 497

Query: 529 MLARGTK 535
           ML +  +
Sbjct: 498 MLDQAPR 504



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 83/191 (43%), Gaps = 42/191 (21%)

Query: 32  SVKPASDLNR----ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREA 86
           +VK   D N+    AL+  +   G +++A  +F+ +++ D  + NTMI AYA +G     
Sbjct: 330 TVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNG----- 384

Query: 87  KKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLK 146
                              +G+       EA ELF +++  G  P+  T  ++L  C+  
Sbjct: 385 -------------------FGH-------EALELFERLKKLGLEPNVVTFISILLACNNA 418

Query: 147 GLLQRGEQ-FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNH--VAW 203
           GL++ G Q F         +L     T ++D+  + K   EA  L +   +GKN   + W
Sbjct: 419 GLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIE---EGKNPDVIQW 475

Query: 204 TTMITGYSQNG 214
            T++     +G
Sbjct: 476 RTLLNACKIHG 486


>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
 gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 624

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 227/554 (40%), Positives = 335/554 (60%)

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           QVH  I ++G   N+ V + L+ MY + G L+ A+ L +     +  SW+ ++ G+A+ G
Sbjct: 71  QVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVG 130

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
                  +F+++      +DD++ P V+       DL   + +H + +K G +   FV  
Sbjct: 131 NFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCA 190

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
            L+DMYA+   ++ A  +F  M  +D+ +WT +I   A  G   E+L +F  MR  GI P
Sbjct: 191 TLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVP 250

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           D V + +++ ACA+L  +   + +HA    +G    + +  +++ +YAKCG +  A  +F
Sbjct: 251 DKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIF 310

Query: 496 DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAE 555
           D M  R+VITW+A+I     +G+G++AL+ +  ML  G  P+ ITFV LL+ACSHAGL E
Sbjct: 311 DRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIE 370

Query: 556 NARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
             + +F SM   YG+ P   HY CM+DLLGR+G+L EA  +++ M  E D  +W ALL A
Sbjct: 371 EGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGA 430

Query: 616 CRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEP 675
           CR+H  L+L ER A +L +L+      YV LSN+Y+ AGKWED A+ R LM   G+RK P
Sbjct: 431 CRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGGLRKIP 490

Query: 676 GCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKE 735
           G +W+E   +++ F   D+ HP   +IY  +  +   ++ AGY PD N  L++V+EE K+
Sbjct: 491 GRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEVAGYHPDTNDVLYDVDEEVKQ 550

Query: 736 IGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRF 795
             L  HSEKLA+AFGLL LPQG PIRI KNLRVCGDCHT  K++S +  + II+RD+ RF
Sbjct: 551 GLLYSHSEKLAIAFGLLVLPQGHPIRITKNLRVCGDCHTFCKFVSLIEQKTIIVRDAKRF 610

Query: 796 HHFKAGNCSCGDYW 809
           HHFK G CSC DYW
Sbjct: 611 HHFKEGVCSCRDYW 624



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 191/382 (50%), Gaps = 6/382 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++  Y   G L +A++LF+    ++ ++WS ++ GY+  G     F +F ++   G  
Sbjct: 89  NKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAP 148

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
              Y+   V+R C     L+ G   H   +K   D   FV   LVDMYA+CK + +A  +
Sbjct: 149 LDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQI 208

Query: 191 F-KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           F KM+   ++   WT MI   +++G   +++  F  MR +G+  ++    +++ ACA + 
Sbjct: 209 FVKMWK--RDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLG 266

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
           A +    +H  I  +G+  +V + +A+IDMYAKCG ++SAR + +  ++ N ++W++MI 
Sbjct: 267 AMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIA 326

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTGFE 368
            +   G  ++AL LF  M    I  +  T+ S+L  C  + +     +   S+  + G  
Sbjct: 327 AYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVT 386

Query: 369 GYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF-S 426
                   ++D+  + G LD A  M+  +  +KD + W +L+  C  H   + A +   S
Sbjct: 387 PDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAERVARS 446

Query: 427 DMRISGICPDHVVVSSILSACA 448
            +++    P H V+ S + A A
Sbjct: 447 LLKLQSQKPGHYVLLSNIYANA 468



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 199/438 (45%), Gaps = 42/438 (9%)

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
           N  V   L+ MY +   + +A+ LF      ++  +W+ ++ GY++ G  F     FR++
Sbjct: 84  NLAVANKLLYMYVERGALEDAQELFDGMSK-RHPYSWSVIVGGYAKVGNFFSCFWMFREL 142

Query: 227 RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDL 286
              G   + ++ P ++ AC  +     G  +H   L  G +   +V + L+DMYA+C  +
Sbjct: 143 LRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVV 202

Query: 287 DSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCF 346
           + A ++       +  +W  MI   A  G   E+L  F +M  + I  D     +V+   
Sbjct: 203 EDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYAC 262

Query: 347 ASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWT 406
           A    +N AK++H+ I  TG+     +  A+IDMYAK G+++ A  +F+ MQ ++VI+W+
Sbjct: 263 AKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWS 322

Query: 407 SLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
           ++I    YHG  E+AL+ F  M  SGI P+ +   S+L AC+   ++E GQ+  +     
Sbjct: 323 AMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDE 382

Query: 467 GGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFY 526
            G                               T DV  +T ++    + G+  EAL+  
Sbjct: 383 YGV------------------------------TPDVKHYTCMVDLLGRAGRLDEALEMI 412

Query: 527 DQMLARGTKPDYITFVGLLFAC---SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDL 583
           + M     + D + +  LL AC    H  LAE       S+ K+   KPG  HY  + ++
Sbjct: 413 EGM---PVEKDEVLWGALLGACRIHRHLDLAERVA---RSLLKLQSQKPG--HYVLLSNI 464

Query: 584 LGRSGKLIEAKALLDQMV 601
              +GK  +     D M 
Sbjct: 465 YANAGKWEDMAKTRDLMT 482



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 160/336 (47%), Gaps = 35/336 (10%)

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
           S+L+C     +L   + VH+ I   G      V N L+ MY ++G L+ A  +F+ M  +
Sbjct: 59  SLLSCR----NLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKR 114

Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
              SW+ ++ G A  G++      F ++  SG   D      ++ AC +L  L+ G+ +H
Sbjct: 115 HPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIH 174

Query: 461 AVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGK 520
            + LK G      V  +LV +YA+C  + DA+++F  M  RD+ TWT +I   A++G   
Sbjct: 175 CITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPV 234

Query: 521 EALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE-------SMDKVYGIKPG 573
           E+L F+D+M  +G  PD +  V +++AC+  G    A+           S+D + G    
Sbjct: 235 ESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILG---- 290

Query: 574 PDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLF 633
                 MID+  + G +  A+ + D+M    +   W A+++A   HG    GE+A     
Sbjct: 291 ----TAMIDMYAKCGSVESARWIFDRMQVR-NVITWSAMIAAYGYHGQ---GEKA----L 338

Query: 634 ELEPM--------NAMPYVQLSNMYSTAGKWEDAAR 661
           EL PM        N + +V L    S AG  E+  R
Sbjct: 339 ELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQR 374



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 123/247 (49%), Gaps = 3/247 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D   F   T++  YA    + +A ++F +   ++  TW+ +I   +  G+ +E+   F +
Sbjct: 183 DYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDR 242

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+ +G  P +  L  V+  C+  G + + +  H Y   T + L+  + T ++DMYAKC  
Sbjct: 243 MRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGS 302

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +  A ++F      +N + W+ MI  Y  +G G KA+E F  M   G+  N+ TF S+L 
Sbjct: 303 VESARWIFDRM-QVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLY 361

Query: 244 ACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NE 301
           AC+     + G +    +    G   +V   + ++D+  + G LD A  ++E   ++ +E
Sbjct: 362 ACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDE 421

Query: 302 VSWNSMI 308
           V W +++
Sbjct: 422 VLWGALL 428



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 41/175 (23%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           L  A++D ++  G ++ A  +F++M  R+  TW+ MIAAY   G+  +A +LF       
Sbjct: 289 LGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFP------ 342

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                                     M   G  P++ T  ++L  CS  GL++ G++F  
Sbjct: 343 -------------------------MMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFS 377

Query: 158 -----YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
                Y +    D+  +  T +VD+  +   + EA  + +  P  K+ V W  ++
Sbjct: 378 SMWDEYGVTP--DVKHY--TCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALL 428


>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 950

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 257/736 (34%), Positives = 392/736 (53%), Gaps = 57/736 (7%)

Query: 74  IAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQ 133
           I+  +  G++ EA+K F+   +K   +W+S++ GY   GL  EA ++F +M         
Sbjct: 24  ISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEMP-------- 75

Query: 134 YTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKM 193
                                          + N     GLV  Y K + I EA  +F++
Sbjct: 76  -------------------------------ERNIVSWNGLVSGYIKNRMIEEARNVFEI 104

Query: 194 FPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDF 253
            P+ +N V+WT M+ GY Q G   +A   F  M      S    F  ++       AR  
Sbjct: 105 MPE-RNVVSWTAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFGGLIDGGRIDDARKL 163

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
              + G         +V   + +I    + G +D AR + +     N ++W +MI G+ +
Sbjct: 164 YDMMPG--------KDVVASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTMITGYGQ 215

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
                 A  LF+ M  +     + ++ S+L  +  +  + +A+    ++           
Sbjct: 216 NKRVDVARKLFEVMPEKT----EVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPV----IA 267

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
            NA+I    + G +  A  VF+ M+D+D  +W  +I      G   EAL+ F+ M+  G+
Sbjct: 268 CNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGV 327

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
            P    + SILS CA L  L++G+QVHA  ++      + V + L+ +Y KCG +  A  
Sbjct: 328 RPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKL 387

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGL 553
           VFD   ++D+I W ++I G A +G G+EAL+ + +M   GT P+ +T + +L ACS+ G 
Sbjct: 388 VFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGK 447

Query: 554 AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
            E     FESM+  + + P  +HY+C +D+LGR+GK+ +A  L++ M  +PDATVW ALL
Sbjct: 448 LEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALL 507

Query: 614 SACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRK 673
            AC+ H  L+L E AA  LFE+EP NA PY+ LS++ ++  KW D A +RK M+++ + K
Sbjct: 508 GACKTHSRLDLAEVAAKKLFEIEPENAGPYILLSSINASRSKWGDVAEMRKNMRTKNVSK 567

Query: 674 EPGCSWVETNSQVHIFISED-RGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEE 732
            PGCSW+E   +VH+F     R HP +  I   +++   L++EAGY PD +  LH+V+EE
Sbjct: 568 FPGCSWIEVGKKVHMFTRGGIRNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEE 627

Query: 733 GKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDS 792
            K   L+ HSE+LAVA+GLL LP+G PIR+ KNLRVCGDCH A+K IS V  R IILRD+
Sbjct: 628 EKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDA 687

Query: 793 NRFHHFKAGNCSCGDY 808
           NRFHHF  G CSC DY
Sbjct: 688 NRFHHFNNGECSCRDY 703



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 136/480 (28%), Positives = 242/480 (50%), Gaps = 30/480 (6%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           F+N G   EA Q+F++M +R+  +WN +++ Y  +  + EA+ +F   P +N  +W++++
Sbjct: 59  FAN-GLPREARQMFDEMPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVVSWTAMV 117

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            GY   G+ +EA  LFW+M      P +   + V       GL+  G        +  +D
Sbjct: 118 KGYVQEGMVVEAELLFWRM------PER---NEVSWTVMFGGLIDGGRIDDA---RKLYD 165

Query: 166 L----NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIE 221
           +    +    T ++    +   + EA  +F    + +N + WTTMITGY QN    K ++
Sbjct: 166 MMPGKDVVASTNMIGGLCREGRVDEAREIFDEMRE-RNVITWTTMITGYGQN----KRVD 220

Query: 222 CFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYA 281
             R +     E  + ++ S+L     +S R   A+    ++       V   +A+I    
Sbjct: 221 VARKLFEVMPEKTEVSWTSMLLG-YTLSGRIEDAEEFFEVMPM---KPVIACNAMIVALG 276

Query: 282 KCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPS 341
           + G++  ARR+ +  E  +  +W  MI  + R+GF  EAL LF +M  + ++    +  S
Sbjct: 277 EVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLIS 336

Query: 342 VLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
           +L+  A+   L   + VH+ +V+  F+G  +V + L+ MY K G L  A +VF+    KD
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKD 396

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
           +I W S+I+G A HG  EEALK F +M +SG  P+ V + +IL+AC+    LE G ++  
Sbjct: 397 IIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFE 456

Query: 462 VFLKSGGCSSLSVD--NSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGK 518
             ++S  C + +V+  +  V +  + G ++ A  + +SM  + D   W AL+  C  + +
Sbjct: 457 S-MESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGACKTHSR 515



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 189/416 (45%), Gaps = 45/416 (10%)

Query: 48  NSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYG 107
           + G ID+A +L++ M  +D      MI      GR+ EA+++F+E   +N  TW+++I G
Sbjct: 153 DGGRIDDARKLYDMMPGKDVVASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTMITG 212

Query: 108 Y-SNYGLDI---------EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ-FH 156
           Y  N  +D+         E  E+ W   L GY              +L G ++  E+ F 
Sbjct: 213 YGQNKRVDVARKLFEVMPEKTEVSWTSMLLGY--------------TLSGRIEDAEEFFE 258

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
              +K     NA +V        +   I +A  +F    D +++  W  MI  Y + G+ 
Sbjct: 259 VMPMKPVIACNAMIVA-----LGEVGEIVKARRVFDQMED-RDNATWRGMIKAYERKGFE 312

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
            +A+E F  M+ +GV  +  +  SIL+ CA +++  +G QVH  ++   F+ +VYV S L
Sbjct: 313 LEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVL 372

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           + MY KCG+L  A+ + +     + + WNS+I G+A  G  +EAL +F +M       + 
Sbjct: 373 MTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNK 432

Query: 337 FTYPSVLNCFASNIDLNNAKSV-----HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
            T  ++L   +    L     +         V    E Y    +  +DM  + G +D A 
Sbjct: 433 VTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHY----SCTVDMLGRAGKVDKAM 488

Query: 392 MVFNLMQDK-DVISWTSLITGCAYHGSY---EEALKYFSDMRISGICPDHVVVSSI 443
            + N M  K D   W +L+  C  H      E A K   ++      P ++++SSI
Sbjct: 489 ELINSMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPENAGP-YILLSSI 543



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 148/269 (55%), Gaps = 5/269 (1%)

Query: 43  LVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWS 102
           L+ ++ SG I++A + FE M  +     N MI A    G + +A+++F++   ++  TW 
Sbjct: 241 LLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVALGEVGEIVKARRVFDQMEDRDNATWR 300

Query: 103 SLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT 162
            +I  Y   G ++EA ELF QMQ +G RPS  +L ++L +C+    LQ G Q H + ++ 
Sbjct: 301 GMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRC 360

Query: 163 CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIEC 222
            FD + +V + L+ MY KC  + +A+ +F  FP  K+ + W ++I+GY+ +G G +A++ 
Sbjct: 361 QFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPS-KDIIMWNSIISGYASHGLGEEALKV 419

Query: 223 FRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ--SALIDMY 280
           F +M + G   N+ T  +ILTAC+     + G ++    + S F     V+  S  +DM 
Sbjct: 420 FHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFES-MESKFCVTPTVEHYSCTVDML 478

Query: 281 AKCGDLDSARRLLEYSEIDNEVS-WNSMI 308
            + G +D A  L+    I  + + W +++
Sbjct: 479 GRAGKVDKAMELINSMTIKPDATVWGALL 507



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 106/245 (43%), Gaps = 33/245 (13%)

Query: 470 SSLSVDNSL-VLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
           +S  V+NS  +   ++ G IN+A + FDS+  + + +W +++ G   NG  +EA Q +D+
Sbjct: 14  TSTGVNNSFEISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDE 73

Query: 529 MLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSG 588
           M  R    + +++ GL+       + E AR  FE M +   +      +  M+    + G
Sbjct: 74  MPER----NIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVVS-----WTAMVKGYVQEG 124

Query: 589 KLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSN 648
            ++EA+ L  +M  E +   W  +       G ++     A  L+++ P      V  +N
Sbjct: 125 MVVEAELLFWRM-PERNEVSWTVMFGGLIDGGRID----DARKLYDMMP--GKDVVASTN 177

Query: 649 MYS---TAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSK 705
           M       G+ ++A  +   M+ R +      +W          +    G   R D+  K
Sbjct: 178 MIGGLCREGRVDEAREIFDEMRERNV-----ITWTT--------MITGYGQNKRVDVARK 224

Query: 706 IDEIM 710
           + E+M
Sbjct: 225 LFEVM 229


>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
 gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
          Length = 582

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 231/588 (39%), Positives = 344/588 (58%), Gaps = 10/588 (1%)

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M   G   N FTFP  + +CAA+S    G Q+H  +  +G     +VQ++LI MY KC  
Sbjct: 1   MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60

Query: 286 LDSARRLLEYSEIDNE--VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
           +D+AR+L + +    +  V +NS++ G+A     K+ + LF +M    ++I+  T   ++
Sbjct: 61  IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVI 403
                  +L     VH   VK G +    V N L+ MY K G +DC   +F+ M  K +I
Sbjct: 121 QPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLI 180

Query: 404 SWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVF 463
           +W ++I G A +G     L+ + +M   G CPD + +  +LS+CA L  L  G++V    
Sbjct: 181 TWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKM 240

Query: 464 LKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEAL 523
              G  S+  ++N+LV +YA+CG +  A  +FD M  + V++WTA+I G   +G+G+ A+
Sbjct: 241 EGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAV 300

Query: 524 QFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDL 583
             +D+M+  G KPD   FV +L ACSHAGL      YF  M++ YG++PG +HY+CM+DL
Sbjct: 301 GLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDL 360

Query: 584 LGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPY 643
           LGR+G+L EA+ L++ M    D  +W ALL AC++H ++EL E A   + ELEP N   Y
Sbjct: 361 LGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELEPTNTGYY 420

Query: 644 VQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIY 703
           V LSN+Y+ AG  E   RVR LM+ R ++K+PGCS+VE   +VH+F + DR HP   +IY
Sbjct: 421 VLLSNVYTEAGNLEGILRVRMLMRKRKLKKDPGCSYVEFKGRVHLFFAGDRNHPQTNEIY 480

Query: 704 SKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEI--GLAYHSEKLAVAFGLLTLPQGAPIR 761
            K++E+  L+K      D++    N  E  +E    +  HSEKLAVAF LL   +   I 
Sbjct: 481 KKLNELENLVK------DLDGCKKNDHERREEYLNSMGVHSEKLAVAFALLNTRKETEII 534

Query: 762 IFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           I KNLR+CGDCH  +K +S +  R  ++RD+ RFHHFK G CSC +YW
Sbjct: 535 IIKNLRICGDCHLFIKLVSKIVDRQFVVRDATRFHHFKNGFCSCKEYW 582



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 125/393 (31%), Positives = 189/393 (48%), Gaps = 3/393 (0%)

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M   G  P+ +T    ++ C+   L   G+Q H +  KT   L  FV T L+ MY KC  
Sbjct: 1   MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60

Query: 184 IFEAEYLFKMFPDGKN-HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
           I  A  LF   P  +   V + ++++GY+ N      +  F +MR  GVE N  T   ++
Sbjct: 61  IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
             C        G  VHG  +  G + +  V + L+ MY K G++D  R+L +       +
Sbjct: 121 QPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLI 180

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           +WN+MI G+A+ G     L L+K+M ++    D  T   VL+  A    L+  K V   +
Sbjct: 181 TWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKM 240

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
              GF    F+NNAL++MYA+ GNL  A  +F+ M  K V+SWT++I G   HG  E A+
Sbjct: 241 EGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAV 300

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LVLV 481
             F +M   GI PD     S+LSAC+   +   G     V  +  G    +   S +V +
Sbjct: 301 GLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDL 360

Query: 482 YAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
             + G +N+A  + +SM  R D   W AL+  C
Sbjct: 361 LGRAGRLNEARELIESMQVRADGALWGALLGAC 393



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 176/362 (48%), Gaps = 13/362 (3%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFT--WSSLIYGYSNYGLDIEAFELFWQMQ 125
           F   ++I+ Y     +  A+KLF+E P     T  ++SL+ GY+      +   LF +M+
Sbjct: 46  FVQTSLISMYGKCSLIDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMR 105

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G   +  T+  +++ C + G L  G   HG+ +K   D+++ V   L+ MY K   I 
Sbjct: 106 ELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEID 165

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
               LF   P  K  + W  MI GY+QNG     +E +++M  +G   +  T   +L++C
Sbjct: 166 CGRKLFDEMPR-KGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSC 224

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A + A   G +V   +   GF +N ++ +AL++MYA+CG+L  AR + +   + + VSW 
Sbjct: 225 AHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWT 284

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI--- 362
           ++I G+   G  + A+ LF +M    IK D   + SVL+  +     N       ++   
Sbjct: 285 AIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERK 344

Query: 363 --VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGSYE 419
             ++ G E Y    + ++D+  + G L+ A  +   MQ + D   W +L+  C  H + E
Sbjct: 345 YGLRPGAEHY----SCMVDLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVE 400

Query: 420 EA 421
            A
Sbjct: 401 LA 402



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 161/352 (45%), Gaps = 41/352 (11%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D    N ++  Y  SG +   +KLF+E P K   TW+++I GY+  GL     EL+ +
Sbjct: 145 DMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKE 204

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+ +G+ P   TL  VL  C+  G L  G++         F  N F+   LV+MYA+C  
Sbjct: 205 MESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGN 264

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A  +F   P  K+ V+WT +I GY  +G G  A+  F +M   G++ +   F S+L+
Sbjct: 265 LKKARDIFDGMPV-KSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLS 323

Query: 244 ACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           AC+     + G    G +    G        S ++D+  + G L+ AR L+E  ++  + 
Sbjct: 324 ACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADG 383

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           +    ++G               K+H R++++ +  +  V+    +N             
Sbjct: 384 ALWGALLGAC-------------KIH-RNVELAELAFEQVIELEPTN------------- 416

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
             TG+  Y  ++N    +Y + GNL+    V  LM+ + +        GC+Y
Sbjct: 417 --TGY--YVLLSN----VYTEAGNLEGILRVRMLMRKRKL----KKDPGCSY 456


>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial [Vitis vinifera]
 gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
          Length = 1048

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 239/665 (35%), Positives = 390/665 (58%), Gaps = 7/665 (1%)

Query: 68   FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
            +  +++I  YA   ++  AKK+F+    +N   W++++ GY+  G   +  +LF +M+  
Sbjct: 385  YVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGC 444

Query: 128  GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
            G+ P ++T  ++L  C+    L+ G Q H + IK  F+ N FV   LVDMYAKC  + EA
Sbjct: 445  GFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEA 504

Query: 188  EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
               F+ F   +++V+W  +I GY Q     +A   FR M ++G+  ++ +  SIL+ CA 
Sbjct: 505  RQQFE-FIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCAN 563

Query: 248  VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
            + A + G QVH  ++ SG +  +Y  S+LIDMY KCG +++AR +       + VS N++
Sbjct: 564  LQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAI 623

Query: 308  IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG- 366
            I G+A+     EA+ LF++M    +   + T+ S+L+       LN  + +H LI K G 
Sbjct: 624  IAGYAQNDL-VEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGL 682

Query: 367  -FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALKY 424
             ++G  F+  +L+ MY        A ++F+  Q  K  I WT++I+G   +G  EEAL+ 
Sbjct: 683  LYDG-DFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQL 741

Query: 425  FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
            + +M  +   PD    +S+L AC+ L  L  G+ +H++    G  S     +++V +YAK
Sbjct: 742  YQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAK 801

Query: 485  CGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
            CG +  + +VF+ M ++ DVI+W ++I+G A+NG  + AL+ +D+M     +PD +TF+G
Sbjct: 802  CGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLG 861

Query: 544  LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
            +L ACSHAG     R  F+ M   Y I P  DH ACMIDLLGR G L EA+  +D++  E
Sbjct: 862  VLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLKEAEEFIDKLNFE 921

Query: 604  PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
            P+A +W  LL ACR+HGD   G RAA  L ELEP N+ PYV LSN+Y+ +G W++   VR
Sbjct: 922  PNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPENSSPYVLLSNIYAASGNWDEVNSVR 981

Query: 664  KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMN 723
            + M+ +G+RK PGCSW+    + ++F++ D+ HP   +I++ + +++ L+KE GY+ + +
Sbjct: 982  RAMREKGLRKLPGCSWIVVGQKTNLFVAGDKFHPSAGEIHALLKDLIALMKEDGYIAETD 1041

Query: 724  FALHN 728
              L +
Sbjct: 1042 SLLED 1046



 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 186/574 (32%), Positives = 301/574 (52%), Gaps = 17/574 (2%)

Query: 50  GEIDEAGQLFEKMSD----RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           G  +EA ++FE M       D   + T+I A    GRL +A  LF + P  N   W+ +I
Sbjct: 262 GLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVMI 321

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            G+   G DIEA + F  M   G + ++ TL +VL   +    L  G   H  AIK   +
Sbjct: 322 SGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLN 381

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            N +V + L++MYAKC+ +  A+ +F    D +N V W  M+ GY+QNGY  K ++ F +
Sbjct: 382 SNVYVGSSLINMYAKCEKMEAAKKVFDAL-DERNLVLWNAMLGGYAQNGYASKVMKLFSE 440

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           MR  G   ++FT+ SIL+ACA +   + G Q+H  I+   FE N++V++ L+DMYAKCG 
Sbjct: 441 MRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGA 500

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           L+ AR+  E+    + VSWN++IVG+ ++    EA ++F++M    I  D+ +  S+L+ 
Sbjct: 501 LEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSG 560

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
            A+   L   + VH  +VK+G +   +  ++LIDMY K G ++ A  VF+ M  + V+S 
Sbjct: 561 CANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSM 620

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
            ++I G A      EA+  F +M+  G+ P  +  +S+L AC     L  G+Q+H +  K
Sbjct: 621 NAIIAGYA-QNDLVEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQK 679

Query: 466 SGGCSSLSVDN-----SLVLVYAKCGCINDANRVFDS-MHTRDVITWTALIMGCAQNGKG 519
            G    L  D      SL+++Y       DA+ +F    + +  I WTA+I G  QNG  
Sbjct: 680 RG----LLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCS 735

Query: 520 KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC 579
           +EALQ Y +M     +PD  TF  +L ACS      + R     +  V G+       + 
Sbjct: 736 EEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFHV-GLDSDELTGSA 794

Query: 580 MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
           ++D+  + G +  +  + ++M  + D   W +++
Sbjct: 795 VVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMI 828



 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 168/484 (34%), Positives = 254/484 (52%), Gaps = 37/484 (7%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           + F   ++I  Y+  G L +A+K+F+     +  +W+++I GY   GL  EA ++F  MQ
Sbjct: 216 NSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQ 275

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G  P Q     V+  C                             GL  +   C    
Sbjct: 276 KLGLVPDQVAFVTVITAC----------------------------VGLGRLDDACD--- 304

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
               LF   P+  N VAW  MI+G+ + G   +AI+ F++M   GV+S + T  S+L+A 
Sbjct: 305 ----LFVQMPN-TNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAI 359

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A++ A ++G  VH   +  G  +NVYV S+LI+MYAKC  +++A+++ +  +  N V WN
Sbjct: 360 ASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWN 419

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +M+ G+A+ G+  + + LF +M       D+FTY S+L+  A    L   + +HS I+K 
Sbjct: 420 AMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKH 479

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
            FE   FV N L+DMYAK G L+ A   F  ++++D +SW ++I G       +EA   F
Sbjct: 480 NFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMF 539

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             M + GI PD V ++SILS CA L  LE G+QVH   +KSG  + L   +SL+ +Y KC
Sbjct: 540 RRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKC 599

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G I  A  VF  M +R V++  A+I G AQN    EA+  + +M   G  P  ITF  LL
Sbjct: 600 GAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDL-VEAIDLFQEMQNEGLNPSEITFASLL 658

Query: 546 FACS 549
            AC+
Sbjct: 659 DACT 662



 Score =  251 bits (642), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 151/480 (31%), Positives = 241/480 (50%), Gaps = 36/480 (7%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           + ++  YA  G +  A K FN+   ++   W+S++  YS  G   +    F  +Q  G  
Sbjct: 120 SAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCGVS 179

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+Q+T   VL  C+    +  G+Q H   IK  F+ N+F    L+DMY+KC  + +A  +
Sbjct: 180 PNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKI 239

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F    D  + V+WT MI GY Q G   +A++ F DM+  G+  +Q  F +++TAC  +  
Sbjct: 240 FDAVVD-PDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGL-- 296

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
                                            G LD A  L       N V+WN MI G
Sbjct: 297 ---------------------------------GRLDDACDLFVQMPNTNVVAWNVMISG 323

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
             ++G   EA+  FK M    +K    T  SVL+  AS   LN    VH+  +K G    
Sbjct: 324 HVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSN 383

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
            +V ++LI+MYAK   ++ A  VF+ + +++++ W +++ G A +G   + +K FS+MR 
Sbjct: 384 VYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRG 443

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
            G  PD    +SILSACA L  LE G+Q+H+  +K     +L V+N+LV +YAKCG + +
Sbjct: 444 CGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEE 503

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           A + F+ +  RD ++W A+I+G  Q     EA   + +M+  G  PD ++   +L  C++
Sbjct: 504 ARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCAN 563



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 227/461 (49%), Gaps = 38/461 (8%)

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
           +  H   +K  F     + + +VD+YAKC  +  A   F    + ++ +AW ++++ YS+
Sbjct: 101 KTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQL-EKRDILAWNSVLSMYSR 159

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYV 272
            G   + I CF  ++  GV  NQFT+  +L++CA +   D G QVH  ++  GFE N + 
Sbjct: 160 QGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFC 219

Query: 273 QSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI 332
           + +LIDMY+KCG L  AR++ +     + VSW +MI G+ + G  +EAL +F+ M    +
Sbjct: 220 EGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGL 279

Query: 333 KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM 392
             D   + +V+                                A + +    G LD A  
Sbjct: 280 VPDQVAFVTVI-------------------------------TACVGL----GRLDDACD 304

Query: 393 VFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV 452
           +F  M + +V++W  +I+G    G   EA+ +F +M  +G+      + S+LSA A L  
Sbjct: 305 LFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEA 364

Query: 453 LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMG 512
           L +G  VHA  +K G  S++ V +SL+ +YAKC  +  A +VFD++  R+++ W A++ G
Sbjct: 365 LNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGG 424

Query: 513 CAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKP 572
            AQNG   + ++ + +M   G  PD  T+  +L AC+     E  R     + K +  + 
Sbjct: 425 YAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIK-HNFEY 483

Query: 573 GPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
                  ++D+  + G L EA+    + +   D   W A++
Sbjct: 484 NLFVENTLVDMYAKCGALEEARQQF-EFIRNRDNVSWNAII 523



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 166/324 (51%), Gaps = 13/324 (4%)

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
            +K++H+  +K GF     + +A++D+YAK GN++ A   FN ++ +D+++W S+++  +
Sbjct: 99  TSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYS 158

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
             GS E+ +  F  ++  G+ P+    + +LS+CA L  ++ G+QVH   +K G   +  
Sbjct: 159 RQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSF 218

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
            + SL+ +Y+KCG + DA ++FD++   D ++WTA+I G  Q G  +EAL+ ++ M   G
Sbjct: 219 CEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLG 278

Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
             PD + FV ++ AC   G  ++A   F  M     +      +  MI    + G  IEA
Sbjct: 279 LVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVA-----WNVMISGHVKRGCDIEA 333

Query: 594 KALLDQM----VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYV--QLS 647
                 M    V    +T+  ++LSA      L  G        + + +N+  YV   L 
Sbjct: 334 IDFFKNMWKTGVKSTRSTL-GSVLSAIASLEALNYGLLVHAQAIK-QGLNSNVYVGSSLI 391

Query: 648 NMYSTAGKWEDAARVRKLMKSRGI 671
           NMY+   K E A +V   +  R +
Sbjct: 392 NMYAKCEKMEAAKKVFDALDERNL 415


>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 654

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 235/579 (40%), Positives = 349/579 (60%), Gaps = 6/579 (1%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           TF  ++ +C   ++   G  VH  ++ SG + + Y+ + LI+MY   G +D A ++ + +
Sbjct: 76  TFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDET 135

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNID---L 352
                  WN++    A     ++ L L+ +M+   I  + FTY  VL  C  S +    L
Sbjct: 136 REKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPL 195

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
              K +H+ I++ G+EG+  V   L+D+YA+ G +  A  VF  M DK+++SW+++I   
Sbjct: 196 RKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACY 255

Query: 413 AYHGSYEEALKYFSDMRISG--ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
           A +    +AL+ F  M +      P+ + + S+L ACA L  LE G+ VHA  L+ G  S
Sbjct: 256 AKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDS 315

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
           +L V N+L+ +Y +CG I+   RVFD M  RDVI+W +LI     +G GK+A+Q ++ M+
Sbjct: 316 TLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMI 375

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKL 590
            RG  P YITF+ +L ACSHAGL E A+  FESM   Y I P  +HYACM+D+LGR+ +L
Sbjct: 376 NRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGRANRL 435

Query: 591 IEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMY 650
            EA  L+  M  +P  TVW +LL +CR+H ++EL ERA+  LFELEP NA  YV LS++Y
Sbjct: 436 DEAIELIQNMDFKPGPTVWGSLLGSCRIHCNVELAERASAMLFELEPKNAGNYVLLSHIY 495

Query: 651 STAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIM 710
           + +  W D  RVRK ++SRG++K P CSW+E   +++  +S +  +P   ++ + +  ++
Sbjct: 496 AKSRMWNDVRRVRKQLESRGLQKIPSCSWIEVKRKIYSLVSIEEYNPQIEELCAFLITLL 555

Query: 711 LLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCG 770
             IK  GYVP  N   ++++EE KE  +  HS KLAVAFGL+   +G  IRI  NLR+C 
Sbjct: 556 TEIKNQGYVPQTNVVTYDLDEEEKERIVLGHSGKLAVAFGLINTSKGEIIRISNNLRLCE 615

Query: 771 DCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           DCH  MK++S    R I+LRD NRFH FK G CSCGDYW
Sbjct: 616 DCHAFMKFVSKFTNREILLRDVNRFHCFKDGVCSCGDYW 654



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 195/392 (49%), Gaps = 11/392 (2%)

Query: 39  LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF 98
           +N  +   S S  +D   +L     D+D +    +I  Y + G +  A K+F+ET  K  
Sbjct: 81  INSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTI 140

Query: 99  FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL----LQRGEQ 154
           F W+++    +      +   L+ QM   G   +++T   VL+ C +  L    L++G++
Sbjct: 141 FVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKE 200

Query: 155 FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
            H + ++  ++ +  V+T L+D+YA+   +  A  +F   PD KN V+W+ MI  Y++N 
Sbjct: 201 IHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPD-KNIVSWSAMIACYAKNE 259

Query: 215 YGFKAIECFRDMRVEGVES--NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYV 272
              KA+E F+ M +E  ++  N  T  S+L ACA+++A + G  VH  +L  G ++ + V
Sbjct: 260 MPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPV 319

Query: 273 QSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI 332
            + LI MY +CG++ + +R+ +Y +  + +SWNS+I  +   G  K+A+ +F+ M  R +
Sbjct: 320 LNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGV 379

Query: 333 KIDDFTYPSVLNCFASNIDLNNAKSV--HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
                T+ +VL C  S+  L     +   S++ K            ++D+  +   LD A
Sbjct: 380 SPSYITFITVL-CACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEA 438

Query: 391 FMVFNLMQDKD-VISWTSLITGCAYHGSYEEA 421
             +   M  K     W SL+  C  H + E A
Sbjct: 439 IELIQNMDFKPGPTVWGSLLGSCRIHCNVELA 470


>gi|357481223|ref|XP_003610897.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512232|gb|AES93855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 774

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 250/694 (36%), Positives = 380/694 (54%), Gaps = 34/694 (4%)

Query: 143 CSLKGLLQRGEQFHGYAIKTCFDL--NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNH 200
           C+ K  +++G   H Y +     +  + F+   L++MY KC  +  A YLF   P  +N 
Sbjct: 88  CAQKKYIKQGMALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQMPR-RNF 146

Query: 201 VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
           V+WT +++GY+Q G   +    F  M +     N+F F S+L AC     + +G QVH  
Sbjct: 147 VSWTVLVSGYAQFGLIRECFALFSGM-LACFRPNEFAFASVLCACEEQDVK-YGLQVHAA 204

Query: 261 ILSSGFEANVYVQSALIDMYAKCG---------DLDSARRLLEYSEIDNEVSWNSMIVGF 311
            L    + +VYV +ALI MY+KC            D A  + +  E  N +SWNSMI GF
Sbjct: 205 ALKMSLDFSVYVANALITMYSKCSGGFGGSCDQTTDDAWMVFKSMEYRNLISWNSMISGF 264

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVL----NCFASNIDLNNAK------SVHSL 361
             +G   +A+ LF  M+   I+ +  T   VL    +C +++ D+NN         +H L
Sbjct: 265 QFRGLGDKAIGLFAHMYCNGIRFNSTTLLGVLSSLNHCMSTSDDINNTHHLKNCFQLHCL 324

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGN--LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
            VK+G      V  AL+  YA  G    DC  +  +   + D++SWT++I+  A     E
Sbjct: 325 TVKSGLISEVEVVTALVKSYADLGGHISDCFKLFLDTSGEHDIVSWTAIISVFAERDP-E 383

Query: 420 EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
           +A   F  +       D    S  L ACA     +   +VH+  +K G  +   V N+L+
Sbjct: 384 QAFLLFCQLHRENFVLDRHTFSIALKACAYFVTEKNATEVHSQVMKQGFHNDTVVSNALI 443

Query: 480 LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
             Y + G +  + +VF  M   D+++W +++   A +G+ K+AL  + QM      PD  
Sbjct: 444 HAYGRSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQM---DVHPDSA 500

Query: 540 TFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ 599
           TFV LL ACSHAGL E     F SM + +GI P  DHY+CM+DL GR+GK+ EA+ L+ +
Sbjct: 501 TFVALLAACSHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRK 560

Query: 600 MVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDA 659
           M  +PD+ +W +LL +CR HG+ +L + AA+    L+P N++ Y+Q+SN+YS+ G + +A
Sbjct: 561 MPMKPDSVIWSSLLGSCRKHGEADLAKLAADKFKVLDPKNSLAYIQMSNIYSSGGSFIEA 620

Query: 660 ARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYV 719
             +RK M+   +RK PG SWVE   QVH F S  + HP R  I S+++ ++  +KE GY 
Sbjct: 621 GLIRKEMRDSKVRKRPGLSWVEVGKQVHEFTSGGQHHPKRQAILSRLETLIGQLKEMGYA 680

Query: 720 PDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLL----TLPQGAPIRIFKNLRVCGDCHTA 775
           P++  ALH++E E  E  L +HSEK+A+ F ++    +   G  I+I KN+R+C DCH  
Sbjct: 681 PEIGSALHDIEVEHIEDQLFHHSEKMALVFAIMNEGISPCAGNVIKIMKNIRICVDCHNF 740

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           MK  S ++ + I++RDSNRFHHFK   CSC DYW
Sbjct: 741 MKLASKLFQKEIVVRDSNRFHHFKYATCSCNDYW 774



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 144/480 (30%), Positives = 237/480 (49%), Gaps = 30/480 (6%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N ++  Y   G L  A+ LF++ P +NF +W+ L+ GY+ +GL  E F LF  M 
Sbjct: 114 DIFLTNNLLNMYCKCGHLDYARYLFDQMPRRNFVSWTVLVSGYAQFGLIRECFALFSGM- 172

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           L  +RP+++   +VL  C  +  ++ G Q H  A+K   D + +V   L+ MY+KC   F
Sbjct: 173 LACFRPNEFAFASVLCACEEQD-VKYGLQVHAAALKMSLDFSVYVANALITMYSKCSGGF 231

Query: 186 ---------EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
                    +A  +FK   + +N ++W +MI+G+   G G KAI  F  M   G+  N  
Sbjct: 232 GGSCDQTTDDAWMVFKSM-EYRNLISWNSMISGFQFRGLGDKAIGLFAHMYCNGIRFNST 290

Query: 237 TFPSILTA---CAAVSARDFGA-------QVHGCILSSGFEANVYVQSALIDMYAKCGD- 285
           T   +L++   C + S             Q+H   + SG  + V V +AL+  YA  G  
Sbjct: 291 TLLGVLSSLNHCMSTSDDINNTHHLKNCFQLHCLTVKSGLISEVEVVTALVKSYADLGGH 350

Query: 286 -LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
             D  +  L+ S   + VSW ++I  FA +   ++A  LF ++H  +  +D  T+   L 
Sbjct: 351 ISDCFKLFLDTSGEHDIVSWTAIISVFAERD-PEQAFLLFCQLHRENFVLDRHTFSIALK 409

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
             A  +   NA  VHS ++K GF     V+NALI  Y + G+L  +  VF  M   D++S
Sbjct: 410 ACAYFVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLVS 469

Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
           W S++   A HG  ++AL  F  M +    PD     ++L+AC+   ++E G Q+     
Sbjct: 470 WNSMLKSYAIHGRAKDALDLFKQMDVH---PDSATFVALLAACSHAGLVEEGTQIFNSMT 526

Query: 465 KSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEA 522
           +S G +  L   + +V +Y + G I +A  +   M  + D + W++L+  C ++G+   A
Sbjct: 527 ESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGEADLA 586



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 161/386 (41%), Gaps = 56/386 (14%)

Query: 53  DEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYG 112
           D+A  +F+ M  R+  +WN+MI+                               G+   G
Sbjct: 240 DDAWMVFKSMEYRNLISWNSMIS-------------------------------GFQFRG 268

Query: 113 LDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG-YAIKTCFDLNAF-- 169
           L  +A  LF  M   G R +  TL  VL   SL   +   +  +  + +K CF L+    
Sbjct: 269 LGDKAIGLFAHMYCNGIRFNSTTLLGVLS--SLNHCMSTSDDINNTHHLKNCFQLHCLTV 326

Query: 170 ---------VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNH---VAWTTMITGYSQNGYGF 217
                    VVT LV  YA           FK+F D       V+WT +I+ +++     
Sbjct: 327 KSGLISEVEVVTALVKSYADLGG--HISDCFKLFLDTSGEHDIVSWTAIISVFAERDPE- 383

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           +A   F  +  E    ++ TF   L ACA         +VH  ++  GF  +  V +ALI
Sbjct: 384 QAFLLFCQLHRENFVLDRHTFSIALKACAYFVTEKNATEVHSQVMKQGFHNDTVVSNALI 443

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
             Y + G L  + ++       + VSWNSM+  +A  G  K+AL LFK+M   D+  D  
Sbjct: 444 HAYGRSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQM---DVHPDSA 500

Query: 338 TYPSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL-DCAFMVFN 395
           T+ ++L  C  + +     +  +S+    G   +    + ++D+Y + G + +   ++  
Sbjct: 501 TFVALLAACSHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRK 560

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEA 421
           +    D + W+SL+  C  HG  + A
Sbjct: 561 MPMKPDSVIWSSLLGSCRKHGEADLA 586



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 47/182 (25%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  +  SG +  + Q+F +M   D  +WN+M+ +YA  GR +               
Sbjct: 440 NALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAK--------------- 484

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF---- 155
                           +A +LF QM +    P   T   +L  CS  GL++ G Q     
Sbjct: 485 ----------------DALDLFKQMDV---HPDSATFVALLAACSHAGLVEEGTQIFNSM 525

Query: 156 ---HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
              HG A      L+ +  + +VD+Y +   IFEAE L +  P   + V W++++    +
Sbjct: 526 TESHGIAPH----LDHY--SCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRK 579

Query: 213 NG 214
           +G
Sbjct: 580 HG 581


>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Vitis vinifera]
          Length = 677

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 252/683 (36%), Positives = 372/683 (54%), Gaps = 44/683 (6%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           PS+    + + L      L +  Q H          N+ VVT L+      K +  A  +
Sbjct: 35  PSRSPETHFIPLIHASNTLPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSI 94

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F+ F D  N   +  +I G ++N     ++  F  M    +  ++ T P +L + AA+  
Sbjct: 95  FRCF-DHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVD 153

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS----WNS 306
              G  +HG ++  G E + +V+ +L+DMY K G+L    +L + S   N+      WN 
Sbjct: 154 VGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNV 213

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           +I G  + G   +A SLF+ M  R                       NA S         
Sbjct: 214 LINGCCKVGDLSKAASLFEAMPER-----------------------NAGSW-------- 242

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
                   N+LI+ + + G+LD A  +F  M +K+V+SWT++I G + +G +E+AL  F 
Sbjct: 243 --------NSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFW 294

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
            M   G+ P+ + V S L AC ++  L+ G+++H     +G   +  +  +LV +YAKCG
Sbjct: 295 RMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCG 354

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
            I  A+RVF     +D++TW+ +I G A +G   +ALQ + +M + G  PD + F+ +L 
Sbjct: 355 NIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILT 414

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ACSH+G  +    +FESM   Y I+P   HY  ++DLLGR+G+L EA + +  M   PD 
Sbjct: 415 ACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDF 474

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
            +W AL  ACR H ++E+ E  A  L +LEP +   YV LSN+Y+  G+WED  RVR LM
Sbjct: 475 VIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLM 534

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFAL 726
           K+RG+ K+PG S++E   QVH F++ D  H    +I  K++EI    K+ GY+P+  + L
Sbjct: 535 KNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQEGYMPETAWVL 594

Query: 727 HNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRH 786
           HN+EEE KE  L  HSEKLA+AFGL++   G+ IRI KNLRVCGDCH+ MKY S +  R 
Sbjct: 595 HNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYASKLSRRE 654

Query: 787 IILRDSNRFHHFKAGNCSCGDYW 809
           IILRD  RFHHFK G CSCGDYW
Sbjct: 655 IILRDIKRFHHFKDGTCSCGDYW 677



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 143/260 (55%), Gaps = 3/260 (1%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS 109
           G++ +A  LFE M +R+  +WN++I  +  +G L  A++LF + P KN  +W+++I G+S
Sbjct: 222 GDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFS 281

Query: 110 NYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAF 169
             G   +A  +FW+M  EG RP+  T+ + L  C+  G LQ GE+ H Y     F LN  
Sbjct: 282 QNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRG 341

Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
           + T LVDMYAKC  I  A  +F +   GK+ + W+ MI G++ +G   +A++CF  M+  
Sbjct: 342 IGTALVDMYAKCGNIKSASRVF-VETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSA 400

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCI-LSSGFEANVYVQSALIDMYAKCGDLDS 288
           G+  ++  F +ILTAC+     D G      + L    E  +   + ++D+  + G LD 
Sbjct: 401 GINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDE 460

Query: 289 ARRLLEYSEIDNE-VSWNSM 307
           A   ++   I+ + V W ++
Sbjct: 461 ALSFIQSMPINPDFVIWGAL 480



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 182/423 (43%), Gaps = 81/423 (19%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY---SNYGLDIEAFELFWQMQLEGY 129
           +I++  +   L  A  +F      N F +++LI G    S +   +  F L  ++ +   
Sbjct: 78  LISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSI--- 134

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK--------- 180
           RP + TL  VL+  +    +  G   HG  +K   + ++FV   LVDMY K         
Sbjct: 135 RPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQ 194

Query: 181 ------------------------CKC--IFEAEYLFKMFPD------------------ 196
                                   CK   + +A  LF+  P+                  
Sbjct: 195 LFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGD 254

Query: 197 ------------GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
                        KN V+WTTMI G+SQNG   KA+  F  M  EGV  N  T  S L A
Sbjct: 255 LDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLA 314

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C  + A   G ++H  + S+GF+ N  + +AL+DMYAKCG++ SA R+   ++  + ++W
Sbjct: 315 CTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTW 374

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC--FASNID--LNNAKSVH- 359
           + MI G+A  G   +AL  F KM +  I  D+  + ++L     + N+D  LN  +S+  
Sbjct: 375 SVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRL 434

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSY 418
              ++   + Y  +    +D+  + G LD A      M  + D + W +L   C  H + 
Sbjct: 435 DYSIEPTMKHYTLI----VDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNI 490

Query: 419 EEA 421
           E A
Sbjct: 491 EMA 493


>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 689

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 237/597 (39%), Positives = 350/597 (58%), Gaps = 42/597 (7%)

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS--WNSMIVG 310
            G Q H  I+  G + N ++ + ++ MYA  GDLDSA  ++ +  IDN  S  +NS+I  
Sbjct: 95  LGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSA--VVVFDRIDNPSSLLYNSIIRA 152

Query: 311 FARQGFHKEA---LSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           + R G        L  + +MH   +  D+FT P VL   A    +   + VH   ++ G 
Sbjct: 153 YTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGL 212

Query: 368 EGYKFVNNALIDMYAK-------------------------------QGNLDCAFMVFNL 396
           EG  +V  +LIDMY K                               +G +  A  +F  
Sbjct: 213 EGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFER 272

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG--ICPDHVVVSSILSACAELTVLE 454
           M+ ++++SWT++I+G   +G  E+AL  F +M   G  + P+ V + S+L ACA+   LE
Sbjct: 273 MEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALE 332

Query: 455 FGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFD--SMHTRDVITWTALIMG 512
            G+++H      G   + SV  +L  +YAKC  + +A   FD  + + +++I W  +I  
Sbjct: 333 RGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITA 392

Query: 513 CAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKP 572
            A +G G EA+  ++ ML  G +PD +TF+GLL  CSH+GL +    +F  M  ++ ++P
Sbjct: 393 YASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEP 452

Query: 573 GPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNL 632
             +HYAC++DLLGR+G+L+EAK L+ QM  +   +VW ALL+ACR H +LE+ E AA  L
Sbjct: 453 RVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRL 512

Query: 633 FELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISE 692
           F LEP N+  YV LSN+Y+ AG WE+  ++R L+K +G++K PGCSW+E N + H+F+  
Sbjct: 513 FVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGA 572

Query: 693 DRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLL 752
           D+ HP   +IY  ++ +   IK AGY+PD +F LH++ EE KE  L  HSEKLA+AFGLL
Sbjct: 573 DKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEEKEYNLTTHSEKLAIAFGLL 632

Query: 753 TLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
               G  +R+ KNLR+CGDCH A K+IS +Y R II+RD NRFH FK G+CSCGDYW
Sbjct: 633 NTRPGVVLRVTKNLRICGDCHAATKFISKIYEREIIVRDLNRFHCFKDGSCSCGDYW 689



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 148/296 (50%), Gaps = 12/296 (4%)

Query: 23  ARYTHNVGNSVKPASD--LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
            R  H  G  V    D  +  +L+D +   G I +A +LF+KM  RD  +WN +IA Y  
Sbjct: 200 GRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMK 259

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG--YRPSQYTLD 137
            G +  A+ LF     +N  +W+++I GY+  G   +A  LF +M  +G   +P+  T+ 
Sbjct: 260 EGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIV 319

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP-D 196
           +VL  C+    L+RG + H +A      LN+ V T L  MYAKC  + EA   F M   +
Sbjct: 320 SVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQN 379

Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
           GKN +AW TMIT Y+ +G G +A+  F +M   GV+ +  TF  +L+ C+     D G  
Sbjct: 380 GKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLN 439

Query: 257 V---HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMI 308
                G I S   E  V   + ++D+  + G L  A+ L+    +    S W +++
Sbjct: 440 HFNDMGTIHS--VEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALL 493



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 165/364 (45%), Gaps = 41/364 (11%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           PS Y    + +  +    ++ G+Q H   +      NAF+   +V MYA    +  A  +
Sbjct: 77  PSSYA--PIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVV 134

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKA---IECFRDMRVEGVESNQFTFPSILTACAA 247
           F    D  + + + ++I  Y+++G        +E +  M   G+  + FT P +L +CA 
Sbjct: 135 FDRI-DNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCAD 193

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR---------------- 291
           +S    G  VHG  L  G E + YV ++LIDMY KCG +  AR+                
Sbjct: 194 LSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNAL 253

Query: 292 ---------------LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM--HARDIKI 334
                          L E  E  N VSW +MI G+ + GF ++AL LF +M     ++K 
Sbjct: 254 IAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKP 313

Query: 335 DDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVF 394
           +  T  SVL   A +  L   + +H      G      V  AL  MYAK  +L  A   F
Sbjct: 314 NWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCF 373

Query: 395 NLMQD--KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV 452
           +++    K++I+W ++IT  A HG   EA+  F +M  +G+ PD V    +LS C+   +
Sbjct: 374 DMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGL 433

Query: 453 LEFG 456
           ++ G
Sbjct: 434 IDAG 437



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 212/464 (45%), Gaps = 65/464 (14%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEA---FELFW 122
           + F    M+A YA+SG L  A  +F+     +   ++S+I  Y+ +G         E + 
Sbjct: 111 NAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYA 170

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           +M   G     +TL  VL+ C+    +  G   HG  ++   + + +V   L+DMY KC 
Sbjct: 171 RMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCG 230

Query: 183 CIFEAEYLF-KMFP-----------------------------DGKNHVAWTTMITGYSQ 212
            I +A  LF KM                               + +N V+WT MI+GY+Q
Sbjct: 231 VIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQ 290

Query: 213 NGYGFKAIECFRDMRVEGVE--SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV 270
           NG+  +A+  F +M  +G E   N  T  S+L ACA  +A + G ++H      G   N 
Sbjct: 291 NGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNS 350

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEID--NEVSWNSMIVGFARQGFHKEALSLFKKMH 328
            VQ+AL  MYAKC  L  AR   +    +  N ++WN+MI  +A  G   EA+S+F+ M 
Sbjct: 351 SVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENML 410

Query: 329 ARDIKIDDFTYPSVLN-CFASNI------DLNNAKSVHSLIVKTGFEGYKFVNNALIDMY 381
              ++ D  T+  +L+ C  S +        N+  ++HS  V+   E Y  V    +D+ 
Sbjct: 411 RAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHS--VEPRVEHYACV----VDLL 464

Query: 382 AKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEALKYFSDMRISGICPD---- 436
            + G L  A  + + M  +   S W +L+  C  H + E  +   +  R+  + PD    
Sbjct: 465 GRAGRLVEAKELISQMPMQAGPSVWGALLAACRSHRNLE--IAELAARRLFVLEPDNSGN 522

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVF-----LKSGGCSSLSVD 475
           +V++S++    AE  + E  +++ A+       KS GCS + ++
Sbjct: 523 YVLLSNLY---AEAGMWEEVKKLRALLKYQGMKKSPGCSWIEIN 563



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 106/240 (44%), Gaps = 20/240 (8%)

Query: 453 LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMG 512
           ++ GQQ HA  +  G   +  +   +V +YA  G ++ A  VFD +     + + ++I  
Sbjct: 93  IKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRA 152

Query: 513 CAQNG---KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG 569
             ++G        L+ Y +M   G   D  T   +L +C     A+ +R          G
Sbjct: 153 YTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSC-----ADLSRVCMGRCVHGQG 207

Query: 570 IKPG--PDHY--ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELG 625
           ++ G   D Y  A +ID+  + G + +A+ L D+M+   D   W AL++     G++ + 
Sbjct: 208 LRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVR-DMASWNALIAGYMKEGEIGVA 266

Query: 626 ERAANNLFE-LEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNS 684
           E    +LFE +E  N + +  + + Y+  G  E A  +   M   G   +P  +WV   S
Sbjct: 267 E----DLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKP--NWVTIVS 320


>gi|302755875|ref|XP_002961361.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
 gi|300170020|gb|EFJ36621.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
          Length = 1121

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 262/764 (34%), Positives = 416/764 (54%), Gaps = 24/764 (3%)

Query: 64   DRDGFTWNTMIAAYANSGRLREAKKLFNETP---FKNFFTWSSLIYGYSNYGLDIEAFEL 120
            DR+      +++ +A  GR+ +A+++F +      +    W+++I  Y++ G   EA  L
Sbjct: 364  DREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFL 423

Query: 121  FWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK 180
               +QL+G +P+  T  + L  CS    LQ G   H    ++ FD    V   LV MY K
Sbjct: 424  LDSLQLQGVKPNCITFISSLGACSS---LQDGRALHLLIHESGFDQEVSVANALVTMYGK 480

Query: 181  CKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
            C  + ++  LF    + K+  +W + I  +S +G   + I+    MR EG    + TF +
Sbjct: 481  CGSLLDSAKLFSEMAE-KDLASWNSAIAAHSYHGRSDECIKLLDQMRGEGFLYEKVTFLT 539

Query: 241  ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
             L +C   ++   G  +H  I+  G+EA+  V SA+I+MY +CG LD AR +    +  +
Sbjct: 540  ALNSCTDPASLQDGVLMHEKIVQCGYEADTVVASAVINMYGRCGGLDRAREIFTRVKTFD 599

Query: 301  EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFA-SNID-LNNAKSV 358
             + W  M+  + + G  K+ +  F+ M    +K    T  +++ C A S ++   +   +
Sbjct: 600  VILWTGMLTVYCQLGRTKQVMEHFRSMLHEGLKPTGVTLVNLITCVADSGLEHFRDGVWI 659

Query: 359  HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY---H 415
             SL  ++G E    V N+LI+M+++  +L  A  +F+   +K V   T+++   AY    
Sbjct: 660  SSLAWESGLESETMVANSLIEMFSEFRSLSQARAIFDRNPEKSVALHTTMLA--AYVKGE 717

Query: 416  GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
               E AL  F+ M + G+ P  V + + +SAC  L      ++VH    + G  S   V 
Sbjct: 718  RGKEAALTLFARMLLEGLEPSSVTLVTAMSACGGLADPSSSKRVHERARELGLESETCVA 777

Query: 476  NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
            N LV +Y K G ++ A  +FD    R+V TW A+     Q G  +  L     M   G +
Sbjct: 778  NGLVDMYGKAGDVDTARYIFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYR 837

Query: 536  PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
            PD +TFV LL  C H+GL E AR+ F +M + +GI P P HY+C+IDLL R+G+L +A+ 
Sbjct: 838  PDSVTFVSLLSVCGHSGLLEEARYNFVAMRREFGIDPSPKHYSCVIDLLARAGELQQAED 897

Query: 596  LLDQM-VGEPDAT-VWKALLSACRVHGDLELGERAAN----NLFELEPMN----AMPYVQ 645
             + ++ V  P ++ +W ALL ACR  G+     R A     ++ ++EP +    +  +V 
Sbjct: 898  FIARISVSSPASSPMWMALLGACRSLGNSSSRARRAARNAMDVEKMEPRSQHDPSAAHVA 957

Query: 646  LSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSK 705
            L+N+ + +G W++A  +RK M  +G+RKEPG S +   +++H F++ DR HP R +IY++
Sbjct: 958  LANICAASGNWDEALSIRKAMAEKGLRKEPGRSLIAVKNRLHEFVAGDRDHPRREEIYAE 1017

Query: 706  IDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKN 765
            +  +   + + GYV D     HNV E  K   L  HSEKLAVAFG+L+ P G+ +RI KN
Sbjct: 1018 LRRLERAMVDRGYVVDTGMVTHNVGEADKRDLLGCHSEKLAVAFGVLSTPPGSSLRIIKN 1077

Query: 766  LRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            LR CGDCHTA+K ISA+  R I++RDSNRFHHF+ G+CSCGDYW
Sbjct: 1078 LRACGDCHTAIKLISAIEGREIVVRDSNRFHHFRNGSCSCGDYW 1121



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 189/717 (26%), Positives = 326/717 (45%), Gaps = 46/717 (6%)

Query: 51  EIDEAGQLFEKMSDRDG-FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS 109
           +I E+G L +   +    F  N ++  Y   GR  EA++ F+    KN F+W+S++  Y 
Sbjct: 39  QIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIAHKNIFSWTSILVAYF 98

Query: 110 NYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLN-- 167
           + GL  +A E F QM   G  P +     +L+ C   G L +G++ H    ++   L+  
Sbjct: 99  HAGLHAQALERFHQMIKAGVEPDRLVYARLLKECGRLGDLAQGKRLHAQIRESGLLLDDR 158

Query: 168 -----AFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIEC 222
                 F+   LV MY KC    EA+  F      KN  +WT+++  Y   G   +A+E 
Sbjct: 159 EESGARFLGNCLVQMYGKCGRTDEAQRAFDSIAH-KNIFSWTSILVAYFHAGLHAQALER 217

Query: 223 FRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK 282
           F  M   GVE ++  F + L  C  +   + GA +H  I     ++++ + +AL+ MY K
Sbjct: 218 FHQMIKAGVEPDRLVFLAALNVCGILKRLEDGAGIHRQIQDKPLDSDLEIGNALVSMYGK 277

Query: 283 CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
           CG LD A+ L +  E  N +SW  ++  FA  G  +E   L + M    IK D     ++
Sbjct: 278 CGRLDLAKELFDCLERRNVISWTILVSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTL 337

Query: 343 LN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
           LN C +  +   ++   H  IV  G +    V  AL+ M+A+ G +D A  +F  + D  
Sbjct: 338 LNVCSSRGVLDEDSWMAHDYIVGGGLDREAVVATALLSMFARCGRVDKAREIFEKVADHS 397

Query: 402 ---VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
              +  W ++IT  A+ G  +EAL     +++ G+ P+ +   S L AC+    L+ G+ 
Sbjct: 398 AQVIECWNAMITAYAHRGCSKEALFLLDSLQLQGVKPNCITFISSLGACSS---LQDGRA 454

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK 518
           +H +  +SG    +SV N+LV +Y KCG + D+ ++F  M  +D+ +W + I   + +G+
Sbjct: 455 LHLLIHESGFDQEVSVANALVTMYGKCGSLLDSAKLFSEMAEKDLASWNSAIAAHSYHGR 514

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA 578
             E ++  DQM   G   + +TF+  L +C+     ++     E + +  G +      +
Sbjct: 515 SDECIKLLDQMRGEGFLYEKVTFLTALNSCTDPASLQDGVLMHEKIVQC-GYEADTVVAS 573

Query: 579 CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA-CRVHGDLELGERAANNLFELEP 637
            +I++ GR G L  A+ +  + V   D  +W  +L+  C++    ++ E   + L E   
Sbjct: 574 AVINMYGRCGGLDRAREIFTR-VKTFDVILWTGMLTVYCQLGRTKQVMEHFRSMLHEGLK 632

Query: 638 MNAMPYVQLSNMYSTAG--KWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG 695
              +  V L    + +G   + D   +  L    G+  E     +  NS + +F SE R 
Sbjct: 633 PTGVTLVNLITCVADSGLEHFRDGVWISSLAWESGLESET----MVANSLIEMF-SEFRS 687

Query: 696 HPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNV-------EEEGKEIGLAYHSEKL 745
                 I+ +              P+ + ALH          E GKE  L   +  L
Sbjct: 688 LSQARAIFDR-------------NPEKSVALHTTMLAAYVKGERGKEAALTLFARML 731



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 166/597 (27%), Positives = 284/597 (47%), Gaps = 57/597 (9%)

Query: 38  DLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK 96
           ++  ALV  +   G +D A +LF+ +  R+  +W  +++ +A +GR RE           
Sbjct: 266 EIGNALVSMYGKCGRLDLAKELFDCLERRNVISWTILVSVFAENGRRRE----------- 314

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF- 155
              TW                  L   M +EG +P +  L  +L +CS +G+L       
Sbjct: 315 ---TWG-----------------LLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMA 354

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHV--AWTTMITGYSQN 213
           H Y +    D  A V T L+ M+A+C  + +A  +F+   D    V   W  MIT Y+  
Sbjct: 355 HDYIVGGGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHR 414

Query: 214 GYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
           G   +A+     ++++GV+ N  TF S L AC+++     G  +H  I  SGF+  V V 
Sbjct: 415 GCSKEALFLLDSLQLQGVKPNCITFISSLGACSSLQD---GRALHLLIHESGFDQEVSVA 471

Query: 274 SALIDMYAKCGD-LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI 332
           +AL+ MY KCG  LDSA+   E +E D   SWNS I   +  G   E + L  +M     
Sbjct: 472 NALVTMYGKCGSLLDSAKLFSEMAEKD-LASWNSAIAAHSYHGRSDECIKLLDQMRGEGF 530

Query: 333 KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM 392
             +  T+ + LN       L +   +H  IV+ G+E    V +A+I+MY + G LD A  
Sbjct: 531 LYEKVTFLTALNSCTDPASLQDGVLMHEKIVQCGYEADTVVASAVINMYGRCGGLDRARE 590

Query: 393 VFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV 452
           +F  ++  DVI WT ++T     G  ++ +++F  M   G+ P  V + ++++  A+  +
Sbjct: 591 IFTRVKTFDVILWTGMLTVYCQLGRTKQVMEHFRSMLHEGLKPTGVTLVNLITCVADSGL 650

Query: 453 LEF--GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
             F  G  + ++  +SG  S   V NSL+ ++++   ++ A  +FD    + V   T ++
Sbjct: 651 EHFRDGVWISSLAWESGLESETMVANSLIEMFSEFRSLSQARAIFDRNPEKSVALHTTML 710

Query: 511 MGCAQNGKGKE-ALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY- 568
               +  +GKE AL  + +ML  G +P  +T V  + AC   GLA+ +     S  +V+ 
Sbjct: 711 AAYVKGERGKEAALTLFARMLLEGLEPSSVTLVTAMSAC--GGLADPS-----SSKRVHE 763

Query: 569 -GIKPGPDHYAC----MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
              + G +   C    ++D+ G++G +  A+ + D+ +   + T W A+  A R  G
Sbjct: 764 RARELGLESETCVANGLVDMYGKAGDVDTARYIFDRAL-RRNVTTWNAMAGAYRQCG 819



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 191/406 (47%), Gaps = 24/406 (5%)

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF-------EANVYVQSALIDMYAK 282
           GV+    ++  +L  C  +     G ++H  I  SG            ++ + L+ MY K
Sbjct: 9   GVDDACRSYARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGK 68

Query: 283 CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
           CG  D A+R  +     N  SW S++V +   G H +AL  F +M    ++ D   Y  +
Sbjct: 69  CGRTDEAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVYARL 128

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGF-------EGYKFVNNALIDMYAKQGNLDCAFMVFN 395
           L       DL   K +H+ I ++G         G +F+ N L+ MY K G  D A   F+
Sbjct: 129 LKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFD 188

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
            +  K++ SWTS++    + G + +AL+ F  M  +G+ PD +V  + L+ C  L  LE 
Sbjct: 189 SIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLED 248

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
           G  +H         S L + N+LV +Y KCG ++ A  +FD +  R+VI+WT L+   A+
Sbjct: 249 GAGIHRQIQDKPLDSDLEIGNALVSMYGKCGRLDLAKELFDCLERRNVISWTILVSVFAE 308

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
           NG+ +E       M   G KPD +  + LL  CS  G+ +   W    M   Y +  G D
Sbjct: 309 NGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSW----MAHDYIVGGGLD 364

Query: 576 HYA----CMIDLLGRSGKLIEAKALLDQMVGEPDATV--WKALLSA 615
             A     ++ +  R G++ +A+ + +++       +  W A+++A
Sbjct: 365 REAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITA 410



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 6/119 (5%)

Query: 43  LVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF--- 98
           LVD +  +G++D A  +F++   R+  TWN M  AY   G  R    L        +   
Sbjct: 780 LVDMYGKAGDVDTARYIFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPD 839

Query: 99  -FTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
             T+ SL+    + GL  EA   F  M+ E G  PS      V+ L +  G LQ+ E F
Sbjct: 840 SVTFVSLLSVCGHSGLLEEARYNFVAMRREFGIDPSPKHYSCVIDLLARAGELQQAEDF 898


>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
 gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
          Length = 706

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 233/593 (39%), Positives = 363/593 (61%), Gaps = 3/593 (0%)

Query: 219 AIECFRDMRVE-GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           A+E F    +E G      T+ +++ AC  + +     ++   ++ +GFE + Y+++ ++
Sbjct: 115 ALEMFEIFELEDGFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRVL 174

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
            M+ KCG +  A RL +     N VSW ++I G+   G + EA  LF  M          
Sbjct: 175 LMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPR 234

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           T+ +++   A    +   + +HS  +K G     FV+ ALIDMY+K G+L+ A  VF+ M
Sbjct: 235 TFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEM 294

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
            DK ++ W S+I G A HG  EEAL  + +MR SG+  DH   S I+  C+ L  +   +
Sbjct: 295 PDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAK 354

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
           QVHA  +++G    +  + +LV  Y+K G ++DA  VFD M  R++I+W ALI G   +G
Sbjct: 355 QVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHG 414

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY 577
            G+EA+  +++ML  G  P+++TF+ +L ACS +GL E     F+SM + + +KP   H+
Sbjct: 415 HGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAMHF 474

Query: 578 ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEP 637
           ACMI+LLGR G L EA AL+ +   +P A +W ALL ACRVHG+LELG+ AA  L+ +EP
Sbjct: 475 ACMIELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYGMEP 534

Query: 638 MNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHP 697
                Y+ L N+Y+++GK ++AA V + +K +G+R  P CSW+E N+Q H F+S D+ H 
Sbjct: 535 EKLSNYIVLLNIYNSSGKLKEAADVFQTLKRKGLRMLPACSWIEVNNQPHAFLSGDKHHV 594

Query: 698 LRTDIYSKIDEIMLLIKEAGYVPD-MNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQ 756
               +  K+DE+ML I + GYVP+  NF L +V+E  ++I + YHSEKLA+A+GLL   +
Sbjct: 595 QIEKVVGKVDELMLNISKLGYVPEEQNFMLPDVDENEEKIRM-YHSEKLAIAYGLLNTLE 653

Query: 757 GAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             P++I ++ R+C DCH+ +K I+ +  R I++RD++RFHHF+ G+CSCGDYW
Sbjct: 654 KTPLQIVQSHRICSDCHSVIKLIAMITKREIVIRDASRFHHFRDGSCSCGDYW 706



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 138/482 (28%), Positives = 231/482 (47%), Gaps = 43/482 (8%)

Query: 116 EAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
           +A E+F   +LE G+     T D ++  C     ++  ++   Y +   F+ + ++   +
Sbjct: 114 DALEMFEIFELEDGFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRV 173

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           + M+ KC  + +A  LF   P  +N V+W T+I+GY  +G   +A   F  MR E  +  
Sbjct: 174 LLMHVKCGMMIDACRLFDEMP-ARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCG 232

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
             TF +++ A A +     G Q+H C + +G   +++V  ALIDMY+KCG L+ A  + +
Sbjct: 233 PRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFD 292

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
                  V WNS+I G+A  G+ +EAL L+ +M    +K+D FT+  ++   +    +  
Sbjct: 293 EMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVAR 352

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
           AK VH+ +V+ GF      N AL+D Y+K G +D A  VF+ M  +++ISW +LI G   
Sbjct: 353 AKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGN 412

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
           HG  EEA+  F  M   G+ P+HV   ++LSAC+   + E G +                
Sbjct: 413 HGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWE---------------- 456

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEAL--QFYDQMLAR 532
                              +F SM     +   A+   C     G+E L  + Y  +   
Sbjct: 457 -------------------IFQSMTRDHKVKPRAMHFACMIELLGREGLLDEAYALIRKA 497

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP-DHYACMIDLLGRSGKLI 591
             +P    +  LL AC   G  E  ++   + +K+YG++P    +Y  ++++   SGKL 
Sbjct: 498 PFQPTANMWAALLRACRVHGNLELGKF---AAEKLYGMEPEKLSNYIVLLNIYNSSGKLK 554

Query: 592 EA 593
           EA
Sbjct: 555 EA 556



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 204/391 (52%), Gaps = 9/391 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +  N ++  +   G + +A +LF+E P +N  +W ++I GY + G  +EAF LF  M+
Sbjct: 166 DQYMRNRVLLMHVKCGMMIDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMR 225

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            E Y     T   ++R  +   ++  G Q H  AIK     + FV   L+DMY+KC  + 
Sbjct: 226 EEFYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLE 285

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A  +F   PD K  V W ++I GY+ +GY  +A++ + +MR  GV+ + FTF  I+  C
Sbjct: 286 DAHCVFDEMPD-KTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRIC 344

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           + +++     QVH  ++ +GF  +V   +AL+D Y+K G +D AR + +     N +SWN
Sbjct: 345 SRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWN 404

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVK 364
           ++I G+   G  +EA+ +F+KM    +  +  T+ +VL+ C  S +     +   S+   
Sbjct: 405 ALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRD 464

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEALK 423
              +        +I++  ++G LD A+ +      +   + W +L+  C  HG+ E  L 
Sbjct: 465 HKVKPRAMHFACMIELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHGNLE--LG 522

Query: 424 YFSDMRISGICPD----HVVVSSILSACAEL 450
            F+  ++ G+ P+    ++V+ +I ++  +L
Sbjct: 523 KFAAEKLYGMEPEKLSNYIVLLNIYNSSGKL 553



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 100/182 (54%), Gaps = 1/182 (0%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           +D F    +I  Y+  G L +A  +F+E P K    W+S+I GY+ +G   EA +L+ +M
Sbjct: 266 QDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEM 325

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
           +  G +   +T   ++R+CS    + R +Q H   ++  F L+    T LVD Y+K   +
Sbjct: 326 RDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKV 385

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            +A ++F      +N ++W  +I GY  +G+G +AI+ F  M  EG+  N  TF ++L+A
Sbjct: 386 DDARHVFDRM-SCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSA 444

Query: 245 CA 246
           C+
Sbjct: 445 CS 446



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 119/266 (44%), Gaps = 31/266 (11%)

Query: 3   KLDFKILNFSLRCRSKIIGPARYTHNVGNSVKPASDL----NRALVDF-SNSGEIDEAGQ 57
           K+D    +  +R  S++   AR      + V+    L    N ALVDF S  G++D+A  
Sbjct: 331 KMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARH 390

Query: 58  LFEKMSDRDGFTWNTMIAAYANSGRLREA----KKLFNETPFKNFFTWSSLIYGYSNYGL 113
           +F++MS R+  +WN +IA Y N G   EA    +K+  E    N  T+ +++   S  GL
Sbjct: 391 VFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGL 450

Query: 114 DIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQ------RGEQFHGYAIKTCFDL 166
               +E+F  M  +   +P       ++ L   +GLL       R   F   A      L
Sbjct: 451 FERGWEIFQSMTRDHKVKPRAMHFACMIELLGREGLLDEAYALIRKAPFQPTANMWAALL 510

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
            A  V G +++       F AE L+ M P+  ++  +  ++  Y+ +G   +A + F+ +
Sbjct: 511 RACRVHGNLELGK-----FAAEKLYGMEPEKLSN--YIVLLNIYNSSGKLKEAADVFQTL 563

Query: 227 RVEGVESNQFTFPSILTACAAVSARD 252
           + +G+         +L AC+ +   +
Sbjct: 564 KRKGLR--------MLPACSWIEVNN 581


>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
 gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
          Length = 879

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 262/757 (34%), Positives = 415/757 (54%), Gaps = 20/757 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           + D +   T++  Y     + +A+K+F+    K    W+++I  Y+      +A ++F+ 
Sbjct: 132 ESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYA 191

Query: 124 MQLEGYRPSQYTLDNVLRLCS-LKGL-------LQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           M LEG +  + T   VL  CS LK L       L   E+ H +   + F       T LV
Sbjct: 192 MLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSF------ATALV 245

Query: 176 DMYAKCKCIFEAEYLFKMFPDGK-NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           + Y  C    + E  F+ F   +   +  T MIT Y+Q     +A+E F+ M +EGV+ +
Sbjct: 246 NFYGSCG---DLEQAFRAFSRHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLD 302

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
           +    ++L AC+     + G  +HG +    F+ +V   +ALI+MY KCG L+ A  +  
Sbjct: 303 RIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFR 362

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
             +  + +SWN++I    +   H EAL L   M    +K D  ++ + L   A++  L  
Sbjct: 363 SMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEALAK 422

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
            + +HS IV++G +    ++NA++DMY    + D A  VF  M+ +D +SW ++IT  A 
Sbjct: 423 GRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMITAYAA 482

Query: 415 HGSYE-EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
                 EAL  F  M++ G  PD +   + LSACA    L  G+ +H    ++G  S+++
Sbjct: 483 QPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMT 542

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
           V N+++ +YAK G +  A ++F  M   DVI+W  +I   AQ+G   + L+F+ +M   G
Sbjct: 543 VANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEG 602

Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKVY-GIKPGPDHYACMIDLLGRSGKLIE 592
             P+ +TFV ++ ACSH GL ++    F S+   +  I P  +HY CM+DL+ R+GKL  
Sbjct: 603 KLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDA 662

Query: 593 AKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYST 652
           A+  +     +PD  +   +L A +VH D+E   ++A +L EL P  +  YV LSN+Y  
Sbjct: 663 AEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLSNLYDE 722

Query: 653 AGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLL 712
            GK ++ A++R+LM  + IRKEP  S +    +VH F + D  +    +I  +++ + L 
Sbjct: 723 VGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPEILEELERLSLE 782

Query: 713 IKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDC 772
           + +AGY PD    LH+V +E K+  L+YHSEKLA+AFGL++   G  +RI KNLRVCGDC
Sbjct: 783 MAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLRIIKNLRVCGDC 842

Query: 773 HTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           HTA K+IS +  R I++RDS+RFHHF  G CSCGDYW
Sbjct: 843 HTATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879



 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 172/564 (30%), Positives = 279/564 (49%), Gaps = 14/564 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           DR  F  + ++  Y + G L +AK  F+  P ++  TW+ LI  +   G   +A  LF  
Sbjct: 30  DRGPFMGDLLVRMYVDCGSLIDAKACFDRMPVQDALTWARLIRAHGQIGDSEQALHLFRS 89

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKG-LLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           MQLEG  P       VL  CS    LL+ G + HG    T  + + +V T L+ MY KC 
Sbjct: 90  MQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCS 149

Query: 183 CIFEAEYLFKMFPDGKNH---VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFP 239
            + +A  +F    DG  H   V W  MIT Y+Q  +  +AI+ F  M +EGV++ + TF 
Sbjct: 150 SVEDARKVF----DGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFI 205

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFE--ANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
            +L AC+ +   +    V  C+     +   +    +AL++ Y  CGDL+ A R      
Sbjct: 206 GVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQAFRAFSRHR 265

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
           ++  ++  +MI  + ++    EAL LFK M    +K+D     +VLN  +    L   + 
Sbjct: 266 LELILA-TAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRI 324

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           +H  + +  F+ +    NALI+MY K G+L+ A  VF  MQ +DVISW ++I     H  
Sbjct: 325 IHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQ 384

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
           + EAL     M++ G+  D +   + L  CA    L  G+ +H+  ++SG  + + +DN+
Sbjct: 385 HPEALHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRMIHSWIVESGIKADVMLDNA 444

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMG-CAQNGKGKEALQFYDQMLARGTKP 536
           ++ +Y  C   +DA+RVF +M  RD ++W A+I    AQ     EAL  + QM   G  P
Sbjct: 445 ILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMP 504

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           D I+FV  L AC+        +   + + +  G++        ++++  +SG L+ A+ +
Sbjct: 505 DVISFVAALSACAAQASLAEGKLLHDRIRET-GLESNMTVANAVLNMYAKSGTLVLARKM 563

Query: 597 LDQMVGEPDATVWKALLSACRVHG 620
             +M   PD   W  ++SA   HG
Sbjct: 564 FGKM-PLPDVISWNGMISAFAQHG 586



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 227/474 (47%), Gaps = 15/474 (3%)

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
           L  G++ H    K+  D   F+   LV MY  C  + +A+  F   P  ++ + W  +I 
Sbjct: 14  LDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP-VQDALTWARLIR 72

Query: 209 GYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA-VSARDFGAQVHGCILSSGFE 267
            + Q G   +A+  FR M++EGV      F ++L AC+A     + G ++HG +  +  E
Sbjct: 73  AHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAME 132

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM 327
           ++ YV + L+ MY KC  ++ AR++ +       V WN+MI  +A+Q  H++A+ +F  M
Sbjct: 133 SDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAM 192

Query: 328 HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN--NALIDMYAKQG 385
               +K +  T+  VL+  +   DL  AK V   + +   +     +   AL++ Y   G
Sbjct: 193 LLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCG 252

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
           +L+ AF  F+     ++I  T++IT       ++EAL+ F  M + G+  D +   ++L+
Sbjct: 253 DLEQAFRAFS-RHRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLN 311

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
           AC+    LE G+ +H    +      ++  N+L+ +Y KCG + +A  VF SM  RDVI+
Sbjct: 312 ACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVIS 371

Query: 506 WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENAR----WYF 561
           W  +I    Q+ +  EAL     M   G K D I+FV  L  C+ +      R    W  
Sbjct: 372 WNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRMIHSWIV 431

Query: 562 ESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
           ES     GIK        ++D+ G      +A  +   M    D   W A+++A
Sbjct: 432 ES-----GIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVR-DQVSWNAMITA 479



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 200/474 (42%), Gaps = 48/474 (10%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           +  +L   A   + D G +VH  I  S  +   ++   L+ MY  CG L  A+   +   
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAK 356
           + + ++W  +I    + G  ++AL LF+ M    +   +  + +VL  C A    L   +
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H ++  T  E   +V+  L+ MY K  +++ A  VF+ ++ K V+ W ++IT  A   
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQD 180

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVF--LKSGGCSSLSV 474
            +E+A++ F  M + G+  + +    +L AC++L  LE  + V       +       S 
Sbjct: 181 HHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSF 240

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
             +LV  Y  CG +  A R F S H  ++I  TA+I    Q  +  EAL+ +  ML  G 
Sbjct: 241 ATALVNFYGSCGDLEQAFRAF-SRHRLELILATAMITQYTQRERWDEALELFKVMLLEGV 299

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKV---YGIKPGPDHYACMIDLLGRSGKLI 591
           K D I  + +L ACS     E  R     M ++     +  G      +I++ G+ G L 
Sbjct: 300 KLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGN----ALINMYGKCGSLE 355

Query: 592 EAKALLDQMVGEPDATVWKALLSACRVHGD-------LELGERAANNLFELEPMNAMPY- 643
           EA  +   M    D   W  +++A   H         L L +       ++  +NA+P  
Sbjct: 356 EAVEVFRSM-QHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLC 414

Query: 644 ------------------------VQLSN----MYSTAGKWEDAARVRKLMKSR 669
                                   V L N    MY +    +DA+RV + MK R
Sbjct: 415 ATSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVR 468



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 137/308 (44%), Gaps = 38/308 (12%)

Query: 17  SKIIGPARYTHN--VGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTM 73
           S+ +   R  H+  V + +K    L+ A++D + +    D+A ++F  M  RD  +WN M
Sbjct: 417 SEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAM 476

Query: 74  IAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQ 133
           I AYA   RL                                EA  LF QMQL G+ P  
Sbjct: 477 ITAYAAQPRLSS------------------------------EALLLFQQMQLHGFMPDV 506

Query: 134 YTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKM 193
            +    L  C+ +  L  G+  H    +T  + N  V   +++MYAK   +  A  +F  
Sbjct: 507 ISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGK 566

Query: 194 FPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDF 253
            P   + ++W  MI+ ++Q+G+  + +  FR M  EG   N  TF S+++AC+       
Sbjct: 567 MP-LPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKD 625

Query: 254 GAQVHGCILSSGFEANVYVQS--ALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
           G Q+   +L      +   +    ++D+ A+ G LD+A + +  + +  +   +S ++G 
Sbjct: 626 GVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGA 685

Query: 312 ARQGFHKE 319
           ++   HK+
Sbjct: 686 SK--VHKD 691


>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
 gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
          Length = 640

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 233/579 (40%), Positives = 344/579 (59%), Gaps = 3/579 (0%)

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
           N   + +IL +C    A   G Q+H  +L SG   +  + + L+D+YA CG +  ARRL 
Sbjct: 62  NHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLF 121

Query: 294 -EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA-RDIKIDDFTYPSVLNCFASNID 351
            E     N   WN +I  +AR G  + A+ L+++M A   ++ D+FTYP VL   A+ +D
Sbjct: 122 DEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLD 181

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
           L   + VH  +++T +    FV   LIDMYAK G +D A+ VF+    +D + W S+I  
Sbjct: 182 LGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAA 241

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
           C  +G   EAL    +M   GI P  V + S +SA A+   L  G+++H    + G  S 
Sbjct: 242 CGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQ 301

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
             +  SL+ +YAK G +  A  +FD +  R++I+W A+I G   +G    A + + +M  
Sbjct: 302 DKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRN 361

Query: 532 RG-TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKL 590
                PD+ITFVG+L AC+H G+ + A+  F+ M  VY IKP   HY C++D+LG SG+ 
Sbjct: 362 EAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGRF 421

Query: 591 IEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMY 650
            EA  ++  M+ +PD+ +W ALL+ C++H ++EL E A + L ELEP +A  YV LSN+Y
Sbjct: 422 KEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALHKLIELEPEDAGNYVLLSNIY 481

Query: 651 STAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIM 710
           + +GKWE+AARVRKLM +RG++K   CSW+E   + H F+  D  HP   +IY +++ + 
Sbjct: 482 AQSGKWEEAARVRKLMTNRGLKKIIACSWIELKGKSHGFLVGDASHPRSDEIYEELERLE 541

Query: 711 LLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCG 770
            LI + GYVPD     HNVE++ K   +  HSE+LA+AFGL++ P G  + + KNLRVC 
Sbjct: 542 GLISQTGYVPDTTSVFHNVEDDEKRNMVRGHSERLAIAFGLISTPPGTKLLVTKNLRVCE 601

Query: 771 DCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           DCH  +K IS +  R II+RD NR+HHF  G CSC D+W
Sbjct: 602 DCHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 640



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/390 (31%), Positives = 196/390 (50%), Gaps = 7/390 (1%)

Query: 131 PSQYTLDN---VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           P  Y  +N   +LR C L   ++ G Q H   + +   L+A + T LVD+YA C  +  A
Sbjct: 58  PYPYNHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVA 117

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACA 246
             LF   P+  N   W  +I  Y+++G    AIE +R+M   G +E + FT+P +L ACA
Sbjct: 118 RRLFDEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACA 177

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
           A+     G +VH  ++ + + A+V+V + LIDMYAKCG +D A  + + + + + V WNS
Sbjct: 178 ALLDLGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNS 237

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           MI    + G   EAL+L + M A  I     T  S ++  A    L   + +H    + G
Sbjct: 238 MIAACGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRG 297

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
           F     +  +L+DMYAK G +  A ++F+ +  +++ISW ++I G   HG  + A + F 
Sbjct: 298 FGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFR 357

Query: 427 DMRISG-ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD-NSLVLVYAK 484
            MR    + PDH+    +LSAC    +++  ++V  + +       +      LV V   
Sbjct: 358 RMRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGH 417

Query: 485 CGCINDANRVFDSMHTR-DVITWTALIMGC 513
            G   +A+ V   M  + D   W AL+ GC
Sbjct: 418 SGRFKEASDVIKGMLVKPDSGIWGALLNGC 447



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 190/406 (46%), Gaps = 13/406 (3%)

Query: 22  PARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSG 81
           P  Y HN   ++  +  L+RA+      G    A  L   +   D      ++  YA+ G
Sbjct: 58  PYPYNHNNYATILRSCVLSRAV----RPGRQLHARLLVSGLG-LDAVLATRLVDLYASCG 112

Query: 82  RLREAKKLFNETPFK-NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNV 139
            +  A++LF+E P + N F W+ LI  Y+  G    A EL+ +M   G   P  +T   V
Sbjct: 113 LVSVARRLFDEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPV 172

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKN 199
           L+ C+    L  G + H   ++T +  + FV  GL+DMYAKC C+ EA  +F      ++
Sbjct: 173 LKACAALLDLGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDS-TTVRD 231

Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG 259
            V W +MI    QNG   +A+   R+M  EG+     T  S ++A A   A   G ++HG
Sbjct: 232 AVVWNSMIAACGQNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHG 291

Query: 260 CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKE 319
                GF +   ++++L+DMYAK G +  AR L +       +SWN+MI GF   G    
Sbjct: 292 YGWRRGFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADH 351

Query: 320 ALSLFKKMHAR-DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN--A 376
           A  LF++M     +  D  T+  VL+       +  AK V  L+V T +     V +   
Sbjct: 352 ACELFRRMRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMV-TVYSIKPMVQHYTC 410

Query: 377 LIDMYAKQGNL-DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           L+D+    G   + + ++  ++   D   W +L+ GC  H + E A
Sbjct: 411 LVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELA 456


>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 262/686 (38%), Positives = 372/686 (54%), Gaps = 57/686 (8%)

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
           L+  LR C     L + +Q H    K   D     +T LV+  A+       +Y  K F 
Sbjct: 28  LNESLRCCKT---LNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFE 84

Query: 196 DGKNHV-------AWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
             K  V          ++I GYS  G G +AI  +  M V GV  N +TFP +L+ C  +
Sbjct: 85  LFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKI 144

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
           +A   G QVHG ++  G E +V++Q+ LI  YA+CG +D   ++ E     N VSW S+I
Sbjct: 145 AAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLI 204

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
            G+AR    KEA+SLF +M                        LN               
Sbjct: 205 CGYARGDRPKEAVSLFFEM------------------------LN--------------- 225

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
             K + NAL+DMY K G +D A  +F+   D++++ + ++++  A  G   EAL    +M
Sbjct: 226 --KVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEM 283

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQ-----VHAVFLKSGGCSSLSVDNSLVLVYA 483
              G  PD V + S +SA A+L  L +G+      VH    K+G    + ++ +LV ++A
Sbjct: 284 LQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFA 343

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           +CG    A +VF+ M  RDV  WTA I   A  G G+ A   ++QML +G KPD + FV 
Sbjct: 344 RCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQ 403

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           +L ACSH G  E     F  M+  +GI P  +HY CM+DLLGR+G L EA  L+  M  E
Sbjct: 404 VLTACSHGGQVEQGLHIFSLMED-HGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPME 462

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
           P+  VW +LL+ACRVH ++E+   AA  + EL P  A  +V LSN+Y++AGKW D ARVR
Sbjct: 463 PNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVR 522

Query: 664 KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMN 723
             ++ +G+RK PG S V+ N  +H F S D  HP  T I   + E+     +AG++PD++
Sbjct: 523 LNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPDLS 582

Query: 724 FALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVY 783
             L +V+E+ KE  L+ HSEKLA+AFGL+   +  PIR+ KNLR+C DCH+  K  S +Y
Sbjct: 583 NVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAKMASIIY 642

Query: 784 LRHIILRDSNRFHHFKAGNCSCGDYW 809
            R II+RD+NRFH F+ G CSC DYW
Sbjct: 643 NREIIVRDNNRFHFFRQGLCSCCDYW 668



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 207/439 (47%), Gaps = 52/439 (11%)

Query: 84  REAKKLFNETPFKN--FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLR 141
           R+A +LF E    +   F  +SLI GYS+ GL  EA  L+ +M + G  P+ YT   VL 
Sbjct: 80  RKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLS 139

Query: 142 LCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHV 201
            C+       G Q HG  +K   + + F+   L+  YA+C  +     +F+   + +N V
Sbjct: 140 GCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSE-RNVV 198

Query: 202 AWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI 261
           +WT++I GY++     +A+  F +M                                   
Sbjct: 199 SWTSLICGYARGDRPKEAVSLFFEM----------------------------------- 223

Query: 262 LSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEAL 321
                  N  + +AL+DMY KCG +D+A+RL +     N V +N+++  +ARQG  +EAL
Sbjct: 224 ------LNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREAL 277

Query: 322 SLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS-----VHSLIVKTGFEGYKFVNNA 376
           ++  +M  +  + D  T  S ++  A  +DL   K      VH+ I K G      +N A
Sbjct: 278 AILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTA 337

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           L+DM+A+ G+   A  VFN M ++DV +WT+ I   A  G+ E A   F+ M I G+ PD
Sbjct: 338 LVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPD 397

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFD 496
            V+   +L+AC+    +E G  + ++    G    +     +V +  + G + +A  +  
Sbjct: 398 VVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIK 457

Query: 497 S--MHTRDVITWTALIMGC 513
           S  M   DV+ W +L+  C
Sbjct: 458 SMPMEPNDVV-WGSLLAAC 475



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/410 (24%), Positives = 177/410 (43%), Gaps = 54/410 (13%)

Query: 52  IDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNY 111
           I   G + +   + D F  N +I  YA  G +    K+F     +N  +W+SLI GY+  
Sbjct: 151 IQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARG 210

Query: 112 GLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV 171
               EA  LF++M                                         LN  +V
Sbjct: 211 DRPKEAVSLFFEM-----------------------------------------LNKVMV 229

Query: 172 TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV 231
             LVDMY KC  I  A+ LF    D +N V + T+++ Y++ G   +A+    +M  +G 
Sbjct: 230 NALVDMYMKCGAIDAAKRLFDECVD-RNLVLYNTILSNYARQGLAREALAILDEMLQQGP 288

Query: 232 ESNQFTFPSILTACAAVSARDFGAQVHG-----CILSSGFEANVYVQSALIDMYAKCGDL 286
             ++ T  S ++A A +    +G   HG      I  +G   ++ + +AL+DM+A+CGD 
Sbjct: 289 RPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARCGDP 348

Query: 287 DSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCF 346
            SA ++       +  +W + I   A +G  + A  LF +M  + +K D   +  VL   
Sbjct: 349 QSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTAC 408

Query: 347 ASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISW 405
           +    +     + SL+   G          ++D+  + G L  AF ++ ++  + + + W
Sbjct: 409 SHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVW 468

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPD----HVVVSSILSACAELT 451
            SL+  C  H + E A   ++  RI+ + P     HV++S+I ++  + T
Sbjct: 469 GSLLAACRVHKNVEMA--TYAAERINELAPQRAGVHVLLSNIYASAGKWT 516



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 132/298 (44%), Gaps = 36/298 (12%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREA------------------- 86
           ++  G +D   ++FE MS+R+  +W ++I  YA   R +EA                   
Sbjct: 176 YAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMLNKVMVNALVDM 235

Query: 87  ----------KKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
                     K+LF+E   +N   +++++  Y+  GL  EA  +  +M  +G RP + T+
Sbjct: 236 YMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTM 295

Query: 137 DNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAF-----VVTGLVDMYAKCKCIFEAEYLF 191
            + +   +    L  G+  HGY + T  + N       + T LVDM+A+C     A  +F
Sbjct: 296 LSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVF 355

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
               + ++  AWT  I   +  G G  A   F  M ++GV+ +   F  +LTAC+     
Sbjct: 356 NKMTE-RDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQV 414

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
           + G  +   +   G    +     ++D+  + G L  A  L++   ++ N+V W S++
Sbjct: 415 EQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLL 472


>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 224/530 (42%), Positives = 333/530 (62%), Gaps = 8/530 (1%)

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           Y +   +++A        + +  SWN++I GFA+ G  ++A  LF  M  ++      ++
Sbjct: 146 YLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKN----GVSW 201

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
            ++++ +  + DL  A+ ++      G +    V  A++  Y K G ++ A  +F  M  
Sbjct: 202 SAMISGYVEHGDLEAAEELYK---NVGMKSV-VVETAMLTGYMKFGKVELAERIFQRMAV 257

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           K++++W S+I G   +   E+ LK F  M  S + P+ + +SS+L  C+ L+ L  G+Q+
Sbjct: 258 KNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQM 317

Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKG 519
           H +  KS      +   SL+ +Y KCG ++ A ++F  M  +DVI+W A+I G AQ+G G
Sbjct: 318 HQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAG 377

Query: 520 KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC 579
           ++AL  +D+M     KPD+ITFV ++ AC+HAG  +    YF+SM K +GI+  P HY C
Sbjct: 378 RKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTC 437

Query: 580 MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMN 639
           +IDLLGR+G+L EA +L+ +M  +P A ++  LL ACR+H +L+L E AA NL  L+P +
Sbjct: 438 VIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTS 497

Query: 640 AMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLR 699
           A  YVQL+N+Y+   KW+  A+VRK+MK   + K PG SW+E  S  H F S DR HP  
Sbjct: 498 ATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPEL 557

Query: 700 TDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAP 759
           T I+ K++E+   +K AGYVPD+ FALH+VEEE KE  L +HSEKLA+AFGL+    G P
Sbjct: 558 TSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTP 617

Query: 760 IRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           IR+FKNLRVCGDCH A+K+ISA+  R II+RD+ RFHHF+ G CSCGDYW
Sbjct: 618 IRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 191/395 (48%), Gaps = 16/395 (4%)

Query: 32  SVKPASDLNRALVDFSN-SGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF 90
           SV+     N  L  ++  +G++ EA +LF+K+ + D  ++N M+  Y  S  +  A   F
Sbjct: 100 SVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVEAALAFF 159

Query: 91  NETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQ 150
           N+ P K+  +W++LI G++  G   +AF+LF  M      P +   + V     + G ++
Sbjct: 160 NKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVM------PEK---NGVSWSAMISGYVE 210

Query: 151 RGEQFHGYAIKTCFDLNAFVV-TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
            G+      +     + + VV T ++  Y K   +  AE +F+     KN V W +MI G
Sbjct: 211 HGDLEAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMA-VKNLVTWNSMIAG 269

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
           Y +N      ++ F+ M    V  N  +  S+L  C+ +SA   G Q+H  +  S    +
Sbjct: 270 YVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKD 329

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA 329
               ++LI MY KCGDLDSA +L       + +SWN+MI G+A+ G  ++AL LF KM  
Sbjct: 330 TTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRN 389

Query: 330 RDIKIDDFTYPSV-LNC-FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL 387
             +K D  T+ +V L C  A  +DL   +   S+  + G E        +ID+  + G L
Sbjct: 390 GTMKPDWITFVAVILACNHAGFVDL-GVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRL 448

Query: 388 DCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEA 421
           D A  +   M  K   + + +L+  C  H + + A
Sbjct: 449 DEAVSLIKEMPFKPHAAIYGTLLGACRIHKNLDLA 483



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 130/516 (25%), Positives = 233/516 (45%), Gaps = 88/516 (17%)

Query: 16  RSKIIGPARYTHNVGNSVKPASD---LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNT 72
           R  ++ P   T N+   V  ASD   LN+ +  F  + +++ A  +FEKMS R   TWNT
Sbjct: 52  RIHLVSPNNVTPNL--HVDTASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNT 109

Query: 73  MIAAYAN-SGRLREAKKLFNETPFKNFFTWSSLIYGY-SNYGLDIEAFELFWQMQLEGYR 130
           M++ Y   +G+++EA +LF++ P  +  +++ ++  Y  +YG++  A   F +M ++   
Sbjct: 110 MLSGYTKVAGKVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVE-AALAFFNKMPVKDI- 167

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            S  TL        + G  Q G+      ++  FDL                        
Sbjct: 168 ASWNTL--------ISGFAQNGQ------MQKAFDL------------------------ 189

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F + P+ KN V+W+ MI+GY ++G    A E ++++   G++S                 
Sbjct: 190 FSVMPE-KNGVSWSAMISGYVEHGDLEAAEELYKNV---GMKS----------------- 228

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
                              V V++A++  Y K G ++ A R+ +   + N V+WNSMI G
Sbjct: 229 -------------------VVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAG 269

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           +      ++ L +FK M    ++ +  +  SVL   ++   L   + +H L+ K+     
Sbjct: 270 YVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKD 329

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
                +LI MY K G+LD A+ +F  M  KDVISW ++I+G A HG+  +AL  F  MR 
Sbjct: 330 TTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRN 389

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL-VYAKCGCIN 489
             + PD +   +++ AC     ++ G Q      K  G  +  V  + V+ +  + G ++
Sbjct: 390 GTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLD 449

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
           +A  +   M  +        ++G  +  K  +  +F
Sbjct: 450 EAVSLIKEMPFKPHAAIYGTLLGACRIHKNLDLAEF 485



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 164/373 (43%), Gaps = 64/373 (17%)

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR-QGFHKEALSLFKK 326
           ++V   +  I  + +  DL+SAR + E   +   V+WN+M+ G+ +  G  KEA  LF K
Sbjct: 71  SDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDK 130

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
           +     + D  +Y  +L C                                   Y +   
Sbjct: 131 IP----EPDSVSYNIMLVC-----------------------------------YLRSYG 151

Query: 387 LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH--VVVSSIL 444
           ++ A   FN M  KD+ SW +LI+G A +G  ++A   FS M      P+   V  S+++
Sbjct: 152 VEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVM------PEKNGVSWSAMI 205

Query: 445 SACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVI 504
           S   E   LE  ++++    K+ G  S+ V+ +++  Y K G +  A R+F  M  ++++
Sbjct: 206 SGYVEHGDLEAAEELY----KNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLV 261

Query: 505 TWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESM 564
           TW ++I G  +N + ++ L+ +  M+    +P+ ++   +L  CS+       R     M
Sbjct: 262 TWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGR----QM 317

Query: 565 DKVYGIKP-GPDHYAC--MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGD 621
            ++    P   D  AC  +I +  + G L  A  L  +M    D   W A++S    HG 
Sbjct: 318 HQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEM-PRKDVISWNAMISGYAQHG- 375

Query: 622 LELGERAANNLFE 634
                R A +LF+
Sbjct: 376 ---AGRKALHLFD 385


>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
 gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
          Length = 862

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 237/664 (35%), Positives = 389/664 (58%), Gaps = 3/664 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +  + +I  Y+++G LR+A+  F+  P+++   W+ ++ GY   G    A  LF  M+
Sbjct: 175 DVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMR 234

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           + G  P+  TL   L +C+ +  L  G Q H  A+K   +    V   L+ MYAKC+C+ 
Sbjct: 235 VSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLD 294

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A  LF++ P   + V W  MI+G  QNG   +A+  F DM   G   +  T  S+L A 
Sbjct: 295 DAWRLFELLPR-DDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPAL 353

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
             ++    G +VHG I+ +    + ++ SAL+D+Y KC D+ +AR L + +   + V  +
Sbjct: 354 TDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGS 413

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           ++I G+   G  ++AL +F+ +  + IK +  T  SVL   AS   L   + +H  +++ 
Sbjct: 414 TVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRN 473

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
            +EG  +V +AL+DMYAK G LD +  +F+ M  KD ++W S+I+  + +G  +EAL  F
Sbjct: 474 AYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLF 533

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             M + GI  ++V +SS LSACA L  + +G+++H V +K    + +  +++L+ +YAKC
Sbjct: 534 RQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKC 593

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G +  A RVF+ M  ++ ++W ++I     +G  KE++ F  +M   G KPD++TF+ L+
Sbjct: 594 GNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALI 653

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
            AC+HAGL E     F+ M K Y I P  +H+ACM+DL  RSG+L +A   +  M  +PD
Sbjct: 654 SACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPD 713

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
           A +W ALL ACRVH ++EL + A+  LF+L+P N+  YV +SN+ + AG+W+  ++VR+L
Sbjct: 714 AGIWGALLHACRVHRNVELADIASQELFKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRL 773

Query: 666 MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYV--PDMN 723
           MK   I K PG SWV+ N+  H+F++ D+ HP   DIY+ +  ++  ++E GYV  PD+ 
Sbjct: 774 MKDNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKALLQELREEGYVPRPDLC 833

Query: 724 FALH 727
             +H
Sbjct: 834 HPMH 837



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 203/394 (51%), Gaps = 26/394 (6%)

Query: 42  ALVDFSNSGEIDEA-GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           AL D +   +  E  G +       D F  + ++  Y     +R A+ L++     +   
Sbjct: 352 ALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVI 411

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
            S++I GY   G+  +A ++F  +  +  +P+  T+ +VL  C+    L  G++ HGY +
Sbjct: 412 GSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVL 471

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAI 220
           +  ++   +V + L+DMYAKC  +  + Y+F      K+ V W +MI+ +SQNG   +A+
Sbjct: 472 RNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKM-SLKDEVTWNSMISSFSQNGEPQEAL 530

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
           + FR M +EG++ N  T  S L+ACA++ A  +G ++HG I+    +A+++ +SALIDMY
Sbjct: 531 DLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMY 590

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
           AKCG+++ A R+ E+    NEVSWNS+I  +   G  KE++S   +M     K D  T+ 
Sbjct: 591 AKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFL 650

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN------------ALIDMYAKQGNLD 388
           ++++  A           H+ +V+ G + ++ +               ++D+Y++ G LD
Sbjct: 651 ALISACA-----------HAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLD 699

Query: 389 CAFMVFNLMQDK-DVISWTSLITGCAYHGSYEEA 421
            A      M  K D   W +L+  C  H + E A
Sbjct: 700 KAIQFIADMPFKPDAGIWGALLHACRVHRNVELA 733



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 178/626 (28%), Positives = 280/626 (44%), Gaps = 61/626 (9%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKT--CFDLNAFVV-TGLVDMYAKCKCIFEAEYLFKMFP 195
           +LR C     L  G Q H  A+ +    + N   + T L+ MY   +   +A  +F   P
Sbjct: 38  LLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFSALP 97

Query: 196 DGK--NHVAWTTMITGYSQNGYGFKAIECFRDM--RVEGVESNQFTFPSILTACAAVSAR 251
                + + W  +I G++  G+   A+  +  M         +  T P ++ +CAA+ A 
Sbjct: 98  RAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAV 157

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
             G  VH    ++G  ++VYV SALI MY+  G L  AR   +     + V WN M+ G+
Sbjct: 158 SLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGY 217

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
            + G    A+ LF+ M     + +  T    L+  A+  DL +   +HSL VK G E   
Sbjct: 218 IKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEV 277

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
            V N L+ MYAK   LD A+ +F L+   D+++W  +I+GC  +G  +EAL  F DM  S
Sbjct: 278 AVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRS 337

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
           G  PD V + S+L A  +L  L+ G++VH   +++       + ++LV +Y KC  +  A
Sbjct: 338 GARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTA 397

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS-- 549
             ++D+    DV+  + +I G   NG  ++ALQ +  +L +  KP+ +T   +L AC+  
Sbjct: 398 RNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASI 457

Query: 550 ---------HAGLAENA---RWYFESMDKVYGIKPGP---DHYA-------------CMI 581
                    H  +  NA   + Y ES       K G     HY               MI
Sbjct: 458 SALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMI 517

Query: 582 DLLGRSGKLIEAKALLDQMVGEP----DATVWKALLSACRVHGDLELGERAANNLFELEP 637
               ++G+  EA  L  QM  E     + T+  A LSAC     +  G+     + +  P
Sbjct: 518 SSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSA-LSACASLPAIYYGKEIHGVIIK-GP 575

Query: 638 MNAMPYVQ--LSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG 695
           + A  + +  L +MY+  G  E A RV + M        P  + V  NS     IS    
Sbjct: 576 IKADIFAESALIDMYAKCGNMELALRVFEFM--------PDKNEVSWNS----IISAYGA 623

Query: 696 HPLRTDIYSKIDEIMLLIKEAGYVPD 721
           H L  +  S +      ++E GY PD
Sbjct: 624 HGLVKESVSFLHR----MQEEGYKPD 645


>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 623

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 233/613 (38%), Positives = 356/613 (58%), Gaps = 8/613 (1%)

Query: 201 VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
             W T +   ++     +A+  +  M   G   N FTFP  L +CAA+S    G+Q HG 
Sbjct: 15  TPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQ 74

Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE--YSEIDNEVSWNSMIVGFARQGFHK 318
           I   G     +VQ+ LI MY K   +D+AR++ E  +      V +N+++ G+       
Sbjct: 75  ITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCS 134

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           EA+ LF++M+   + ++  T   ++    S I+L    S+H   +K GF+    V N  I
Sbjct: 135 EAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFI 194

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
            MY K G+++ A  +F+ M  K +ISW ++++G A +G     L+ + +M ++G+ PD V
Sbjct: 195 TMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPV 254

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
            +  +LS+CA L     G +V      SG  S+  ++N+L+ +YA+CG +  A  VFD M
Sbjct: 255 TLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGM 314

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENAR 558
             R +++WTA+I G   +G G+ A+Q + +M+  G +PD   FV +L ACSHAGL +   
Sbjct: 315 PERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGL 374

Query: 559 WYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRV 618
            YF+ M + Y ++PGP+HY+CM+DLLGR+G+L EA+ L++ M  +PD  VW ALL AC++
Sbjct: 375 EYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKI 434

Query: 619 HGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCS 678
           H ++EL E A   + ELEP N   YV LSN+YS A   +   R+R +MK + ++K+PGCS
Sbjct: 435 HKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCS 494

Query: 679 WVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKE--I 736
           +VE   +VH FI  DR H    +IY  ++E+  +I +    P+ +    N EE  K+   
Sbjct: 495 YVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKD----NREESNKDGFT 550

Query: 737 GLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFH 796
            +  HSEKLAVAFGLL    GA + I KNLR+C DCH   K +S +  R + +RD+ RFH
Sbjct: 551 RVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFH 610

Query: 797 HFKAGNCSCGDYW 809
           HF+ G+CSC DYW
Sbjct: 611 HFRNGSCSCKDYW 623



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/405 (31%), Positives = 202/405 (49%), Gaps = 9/405 (2%)

Query: 115 IEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
           ++A  L+ QM   G RP+ +T    L+ C+   L   G QFHG   K       FV TGL
Sbjct: 31  LQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGL 90

Query: 175 VDMYAKCKCIFEAEYLFKM-FPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
           + MY K   +  A  +F+  F   K  V +  +++GY  N    +A+  FR M  EGV  
Sbjct: 91  ISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPV 150

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
           N  T   ++ AC +    + G+ +H   L  GF+++V V +  I MY KCG ++ A++L 
Sbjct: 151 NSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLF 210

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
           +   +   +SWN+M+ G+A+ G     L L++ M    +  D  T   VL+  A+    +
Sbjct: 211 DEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQS 270

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
               V   I  +GF    F+NNALI+MYA+ GNL  A  VF+ M ++ ++SWT++I G  
Sbjct: 271 VGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYG 330

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV----LEFGQQVHAVFLKSGGC 469
            HG  E A++ F +M  SGI PD      +LSAC+   +    LE+ + +   +    G 
Sbjct: 331 MHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGP 390

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
              S    +V +  + G + +A  + +SM  + D   W AL+  C
Sbjct: 391 EHYSC---MVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGAC 432



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 201/429 (46%), Gaps = 35/429 (8%)

Query: 32  SVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN 91
           ++K  + L+  ++     G+I + G +FE       F    +I+ Y     +  A+K+F 
Sbjct: 55  ALKSCAALSLPILGSQFHGQITKVGCVFEP------FVQTGLISMYCKGSLVDNARKVFE 108

Query: 92  ETPFKNFFT--WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLL 149
           E       T  +++L+ GY +     EA  LF QM  EG   +  TL  ++  C     L
Sbjct: 109 ENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINL 168

Query: 150 QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
           + G   H   +K  FD +  VV   + MY KC  +  A+ LF   P  K  ++W  M++G
Sbjct: 169 ELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPV-KGLISWNAMVSG 227

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
           Y+QNG     +E +R+M + GV  +  T   +L++CA + A+  G +V   I +SGF +N
Sbjct: 228 YAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSN 287

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA 329
            ++ +ALI+MYA+CG+L  A+ + +       VSW ++I G+   G  + A+ LFK+M  
Sbjct: 288 PFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIR 347

Query: 330 RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN------------NAL 377
             I+ D   +  VL+  +           H+ +   G E +K +             + +
Sbjct: 348 SGIEPDGTAFVCVLSACS-----------HAGLTDQGLEYFKMMKRNYQLEPGPEHYSCM 396

Query: 378 IDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           +D+  + G L  A  +   M  K D   W +L+  C  H + E A   F   R+  + P+
Sbjct: 397 VDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFE--RVIELEPE 454

Query: 437 HVVVSSILS 445
           ++    +LS
Sbjct: 455 NIGYYVLLS 463


>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 225/530 (42%), Positives = 331/530 (62%), Gaps = 8/530 (1%)

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           Y +   + +A        + +  SWN++I GFA+ G  ++A  LF  M  ++      ++
Sbjct: 146 YLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKN----GVSW 201

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
            ++++ +  + DL  A+ ++      G +    V  A++  Y K G ++ A  +F  M  
Sbjct: 202 SAMISGYVEHGDLEAAEELYK---NVGMKSV-VVETAMLTGYMKFGKVELAERIFQRMAV 257

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           K++++W S+I G   +   E+ LK F  M  S + P+ + +SS+L  C+ L+ L  G+Q+
Sbjct: 258 KNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQM 317

Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKG 519
           H +  KS      +   SL+ +Y KCG ++ A ++F  M  +DVITW A+I G AQ+G G
Sbjct: 318 HQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAG 377

Query: 520 KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC 579
           ++AL  +D+M     KPD+ITFV ++ AC+HAG  +    YF+SM K +GI+  P HY C
Sbjct: 378 RKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTC 437

Query: 580 MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMN 639
           +IDLLGR+G+L EA +L+ +M   P A ++  LL ACR+H +L+L E AA NL  L+P +
Sbjct: 438 VIDLLGRAGRLDEAVSLIKEMPFTPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTS 497

Query: 640 AMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLR 699
           A  YVQL+N+Y+   KW+  A+VRK+MK   + K PG SW+E  S  H F S DR HP  
Sbjct: 498 ATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPEL 557

Query: 700 TDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAP 759
           T I+ K++E+   +K AGYVPD+ FALH+VEEE KE  L +HSEKLA+AFGL+    G P
Sbjct: 558 TSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTP 617

Query: 760 IRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           IR+FKNLRVCGDCH A+K+ISA+  R II+RD+ RFHHF+ G CSCGDYW
Sbjct: 618 IRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 190/395 (48%), Gaps = 16/395 (4%)

Query: 32  SVKPASDLNRALVDFSN-SGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF 90
           SV+     N  L  ++  +G++ EA +LF+K+ + D  ++N M+  Y  S  ++ A   F
Sbjct: 100 SVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVKAALAFF 159

Query: 91  NETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQ 150
           N+ P K+  +W++LI G++  G   +AF+LF  M      P +   + V     + G ++
Sbjct: 160 NKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVM------PEK---NGVSWSAMISGYVE 210

Query: 151 RGEQFHGYAIKTCFDLNAFVV-TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
            G+      +     + + VV T ++  Y K   +  AE +F+     KN V W +MI G
Sbjct: 211 HGDLEAAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMA-VKNLVTWNSMIAG 269

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
           Y +N      ++ F+ M    V  N  +  S+L  C+ +SA   G Q+H  +  S    +
Sbjct: 270 YVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKD 329

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA 329
               ++LI MY KCGDLDSA +L       + ++WN+MI G+A+ G  ++AL LF KM  
Sbjct: 330 TTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRN 389

Query: 330 RDIKIDDFTYPSV-LNC-FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL 387
             +K D  T+ +V L C  A  +DL   +   S+  + G E        +ID+  + G L
Sbjct: 390 GTMKPDWITFVAVILACNHAGFVDL-GVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRL 448

Query: 388 DCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEA 421
           D A  +   M        + +L+  C  H + + A
Sbjct: 449 DEAVSLIKEMPFTPHAAIYGTLLGACRIHKNLDLA 483



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 126/489 (25%), Positives = 223/489 (45%), Gaps = 88/489 (17%)

Query: 16  RSKIIGPARYTHNVGNSVKPASD---LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNT 72
           R  ++ P   T N+   V  ASD   LN+ +  F  + +++ A  +FEKMS R   TWNT
Sbjct: 52  RIHLVSPNNVTPNL--HVDTASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNT 109

Query: 73  MIAAYAN-SGRLREAKKLFNETPFKNFFTWSSLIYGY-SNYGLDIEAFELFWQMQLEGYR 130
           M++ Y   +G+++EA +LF++ P  +  +++ ++  Y  +YG+   A   F +M ++   
Sbjct: 110 MLSGYTKVAGKVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVK-AALAFFNKMPVKDI- 167

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            S  TL        + G  Q G+      ++  FDL                        
Sbjct: 168 ASWNTL--------ISGFAQNGQ------MQKAFDL------------------------ 189

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F + P+ KN V+W+ MI+GY ++G    A E ++++   G++S                 
Sbjct: 190 FSVMPE-KNGVSWSAMISGYVEHGDLEAAEELYKNV---GMKS----------------- 228

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
                              V V++A++  Y K G ++ A R+ +   + N V+WNSMI G
Sbjct: 229 -------------------VVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAG 269

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           +      ++ L +FK M    ++ +  +  SVL   ++   L   + +H L+ K+     
Sbjct: 270 YVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKD 329

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
                +LI MY K G+LD A+ +F  M  KDVI+W ++I+G A HG+  +AL  F  MR 
Sbjct: 330 TTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRN 389

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL-VYAKCGCIN 489
             + PD +   +++ AC     ++ G Q      K  G  +  V  + V+ +  + G ++
Sbjct: 390 GTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLD 449

Query: 490 DANRVFDSM 498
           +A  +   M
Sbjct: 450 EAVSLIKEM 458



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 163/373 (43%), Gaps = 64/373 (17%)

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR-QGFHKEALSLFKK 326
           ++V   +  I  + +  DL+SAR + E   +   V+WN+M+ G+ +  G  KEA  LF K
Sbjct: 71  SDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDK 130

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
           +     + D  +Y  +L C                                   Y +   
Sbjct: 131 IP----EPDSVSYNIMLVC-----------------------------------YLRSYG 151

Query: 387 LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH--VVVSSIL 444
           +  A   FN M  KD+ SW +LI+G A +G  ++A   FS M      P+   V  S+++
Sbjct: 152 VKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVM------PEKNGVSWSAMI 205

Query: 445 SACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVI 504
           S   E   LE  ++++    K+ G  S+ V+ +++  Y K G +  A R+F  M  ++++
Sbjct: 206 SGYVEHGDLEAAEELY----KNVGMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNLV 261

Query: 505 TWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESM 564
           TW ++I G  +N + ++ L+ +  M+    +P+ ++   +L  CS+       R     M
Sbjct: 262 TWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGR----QM 317

Query: 565 DKVYGIKP-GPDHYAC--MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGD 621
            ++    P   D  AC  +I +  + G L  A  L  +M    D   W A++S    HG 
Sbjct: 318 HQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEM-PRKDVITWNAMISGYAQHG- 375

Query: 622 LELGERAANNLFE 634
                R A +LF+
Sbjct: 376 ---AGRKALHLFD 385


>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
 gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
          Length = 601

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 235/579 (40%), Positives = 349/579 (60%), Gaps = 7/579 (1%)

Query: 237 TFPSILTAC--AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK---CGDLDSARR 291
           T+PS L +C     S ++   Q+    + +  + ++ + + LI+   +      +D A +
Sbjct: 24  TYPSSLLSCLPKCTSLKEL-KQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQ 82

Query: 292 LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID 351
           L E     + V +NSM  G++R     +A+SLF K    ++  DD+T+PS+L        
Sbjct: 83  LFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKA 142

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
               K +H L +K G     +V   LI+MYA   ++D A  VF+ + +  V+S+ ++ITG
Sbjct: 143 FQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITG 202

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
            A      EAL  F  ++   + P+ V V S+LS+CA L  L+ G+ +H    K+G    
Sbjct: 203 YARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKY 262

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
           + V+ +L+ +YAKCG ++ A  VF+SM  RD   W+A+I+  A +G+G++ +  +++M  
Sbjct: 263 VKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMAR 322

Query: 532 RGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLI 591
              +PD ITF+GLL+ACSH GL +    YF SM +VYGI PG  HY CM+DLLGR+G L 
Sbjct: 323 AKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLH 382

Query: 592 EAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYS 651
           EA   +D++  +P   +W+ LLS+C  HG+LEL ++  N + EL+  +   YV LSN+ +
Sbjct: 383 EAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNLCA 442

Query: 652 TAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIML 711
            AGKWED   +RKLM  +G  K PGCS +E ++ VH F S D  H + T ++  +DE++ 
Sbjct: 443 RAGKWEDVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSGDGVHYVSTALHRALDELVK 502

Query: 712 LIKEAGYVPDMNFALH-NVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCG 770
            +K  GYVPD +  +H ++E+E KEI L YHSEKLA++FGLL  P G  IR+ KNLRVCG
Sbjct: 503 ELKSVGYVPDTSLVVHPDMEDEEKEITLRYHSEKLAISFGLLNTPPGTTIRVVKNLRVCG 562

Query: 771 DCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           DCH+A K IS++  R IILRD  RFHHFK G CSCGDYW
Sbjct: 563 DCHSAAKLISSLIDREIILRDVQRFHHFKDGKCSCGDYW 601



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 205/411 (49%), Gaps = 35/411 (8%)

Query: 86  AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL 145
           A +LF   P  +   ++S+  GYS     ++A  LF +       P  YT  ++L+ C +
Sbjct: 80  AHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVV 139

Query: 146 KGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTT 205
               Q+G+Q H  AIK   + N +V   L++MYA C  +  A+ +F    +    V++  
Sbjct: 140 AKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILE-PCVVSYNA 198

Query: 206 MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
           +ITGY+++    +A+  FR ++   ++ N  T  S+L++CA + A D G  +H  +  +G
Sbjct: 199 IITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNG 258

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
            +  V V +ALIDMYAKCG LD A  + E   + +  +W++MIV +A  G  ++ +S+F+
Sbjct: 259 LDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFE 318

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF-------EGYKFVN---- 374
           +M    ++ D+ T+  +L   +           H+ +V  GF       E Y  +     
Sbjct: 319 EMARAKVQPDEITFLGLLYACS-----------HTGLVDEGFRYFYSMSEVYGIIPGIKH 367

Query: 375 -NALIDMYAKQGNLDCAFMVFNLMQDKDV-ISWTSLITGCAYHGSYEEALKYFS-----D 427
              ++D+  + G L  A+   + +  K   I W +L++ C+ HG+ E A +  +     D
Sbjct: 368 YGCMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELD 427

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQ--VHAVFLKSGGCSSLSVDN 476
               G   D+V++S++ +   +   ++  ++  +H   +K  GCSS+ VDN
Sbjct: 428 DSHGG---DYVILSNLCARAGKWEDVDTLRKLMIHKGAVKIPGCSSIEVDN 475



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 132/281 (46%), Gaps = 19/281 (6%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           + + +   T+I  YA    +  A+++F+E       +++++I GY+      EA  LF Q
Sbjct: 159 NENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALSLFRQ 218

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           +Q    +P+  T+ +VL  C+L G L  G+  H Y  K   D    V T L+DMYAKC  
Sbjct: 219 LQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGS 278

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +  A  +F+     ++  AW+ MI  Y+ +G G   +  F +M    V+ ++ TF  +L 
Sbjct: 279 LDGAISVFESM-SVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGLLY 337

Query: 244 ACAAVSARDFG-------AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           AC+     D G       ++V+G I        +     ++D+  + G L  A + ++  
Sbjct: 338 ACSHTGLVDEGFRYFYSMSEVYGII------PGIKHYGCMVDLLGRAGLLHEAYKFIDEL 391

Query: 297 EI-DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
            I    + W +++   +  G     L L K++  + +++DD
Sbjct: 392 PIKPTPILWRTLLSSCSSHG----NLELAKQVMNQILELDD 428



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 6/123 (4%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           +N AL+D ++  G +D A  +FE MS RD   W+ MI AYA  G+ ++   +F E     
Sbjct: 265 VNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEMARAK 324

Query: 98  F----FTWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
                 T+  L+Y  S+ GL  E F  F+ M ++ G  P       ++ L    GLL   
Sbjct: 325 VQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEA 384

Query: 153 EQF 155
            +F
Sbjct: 385 YKF 387


>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Glycine max]
          Length = 586

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 232/585 (39%), Positives = 354/585 (60%), Gaps = 8/585 (1%)

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
           S       IL  C+     D G QVHG +   GF+    V +++IDMY+KCG +  A R+
Sbjct: 2   SESRLLNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARV 61

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
                + N +SWN+MI G+  +   +EAL+LF++M  +    D +TY S L   +     
Sbjct: 62  FNTLPVRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAA 121

Query: 353 NNAKSVHSLIVKTGFE--GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
                +H+ +++ GF       V  AL+D+Y K   +  A  VF+ +++K V+SW++LI 
Sbjct: 122 GEGMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLIL 181

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG-GC 469
           G A   + +EA+  F ++R S    D  V+SSI+   A+  +LE G+Q+HA  +K   G 
Sbjct: 182 GYAQEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGL 241

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
             +SV NS++ +Y KCG   +A+ +F  M  R+V++WT +I G  ++G G +A++ +++M
Sbjct: 242 LEMSVANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEM 301

Query: 530 LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGK 589
              G +PD +T++ +L ACSH+GL +  + YF  +     IKP  +HYACM+DLLGR G+
Sbjct: 302 QENGIEPDSVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGR 361

Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNM 649
           L EAK L+++M  +P+  +W+ LLS CR+HGD+E+G++    L   E  N   YV +SNM
Sbjct: 362 LKEAKNLIEKMPLKPNVGIWQTLLSVCRMHGDVEMGKQVGEILLRREGNNPANYVMVSNM 421

Query: 650 YSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEI 709
           Y+ AG W+++ ++R+ +K +G++KE G SWVE + ++HIF + D  HPL  +I+  + E+
Sbjct: 422 YAHAGYWKESEKIRETLKRKGLKKEAGRSWVEMDKEIHIFYNGDGMHPLIEEIHEVLKEM 481

Query: 710 MLLIKEA-GYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGL----LTLPQGAPIRIFK 764
              +KE  GYV  +NF+LH+VEEE K   L  HSEKLA+   L    L L     IRIFK
Sbjct: 482 EKRVKEEMGYVHSINFSLHDVEEESKMESLRVHSEKLAIGLVLVRRGLKLKGERVIRIFK 541

Query: 765 NLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           NLRVCGDCH  +K +S V     ++RD+NRFH F+ G CSCGDYW
Sbjct: 542 NLRVCGDCHAFIKGLSKVLKIAFVVRDANRFHRFENGLCSCGDYW 586



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 189/394 (47%), Gaps = 18/394 (4%)

Query: 39  LNRALVDFSNSGEIDEAGQL---FEKMS-DRDGFTWNTMIAAYANSGRLREAKKLFNETP 94
           LN+ L   S    +D+  Q+    EK+  D      N+MI  Y+  G + EA ++FN  P
Sbjct: 7   LNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTLP 66

Query: 95  FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ 154
            +N  +W+++I GY+N     EA  LF +M+ +G  P  YT  + L+ CS       G Q
Sbjct: 67  VRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQ 126

Query: 155 FHGYAIKTCFDL--NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
            H   I+  F     + V   LVD+Y KC+ + EA  +F    + K+ ++W+T+I GY+Q
Sbjct: 127 IHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEE-KSVMSWSTLILGYAQ 185

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFE-ANVY 271
                +A++ FR++R      + F   SI+   A  +  + G Q+H   +   +    + 
Sbjct: 186 EDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMS 245

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD 331
           V ++++DMY KCG    A  L       N VSW  MI G+ + G   +A+ LF +M    
Sbjct: 246 VANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENG 305

Query: 332 IKIDDFTYPSVLNCFASNIDLNNAKSVHSLI-----VKTGFEGYKFVNNALIDMYAKQGN 386
           I+ D  TY +VL+  + +  +   K   S++     +K   E Y      ++D+  + G 
Sbjct: 306 IEPDSVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYA----CMVDLLGRGGR 361

Query: 387 LDCAFMVFNLMQDK-DVISWTSLITGCAYHGSYE 419
           L  A  +   M  K +V  W +L++ C  HG  E
Sbjct: 362 LKEAKNLIEKMPLKPNVGIWQTLLSVCRMHGDVE 395


>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic [Vitis vinifera]
 gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
          Length = 893

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 237/616 (38%), Positives = 363/616 (58%), Gaps = 3/616 (0%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
            D F    +I  YA    + +A K F   P +N  +W+++I G+      I AF  F +M
Sbjct: 281 EDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEM 340

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
           +  G + + YT+ +VL  C+   +++   Q H +  KT F L++ V + L++MY+K   +
Sbjct: 341 RKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVV 400

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
             +E +F+     KN   W  MI+ ++Q+G   +A+E F+ M  EG+  ++F   S+L+ 
Sbjct: 401 DLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSI 460

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
             ++S    G  +H  IL  G   ++ V S+L  MY+KCG L+ +  + E     + VSW
Sbjct: 461 IDSLS---LGRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSW 517

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
            SMI GF+     ++A+ LF++M   +I+ D  T  + L   ++   L   K VH   ++
Sbjct: 518 ASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALR 577

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
                   V  AL++MY+K G +  A  VF+++  KD  S +SL++G A +G  E+AL  
Sbjct: 578 ARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLL 637

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           F ++R++ +  D   VSS++ A A L  L+ G Q+HA   K G  + +SV +SLV +Y+K
Sbjct: 638 FHEIRMADLWIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSK 697

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG I++ ++VF+ +   D+I+WTA+I+  AQ+GKG EAL+ YD M   GTKPD +TFVG+
Sbjct: 698 CGSIDECHKVFEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGV 757

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L ACSH G+ E    +  SM K YGI+PG  HYACM+DLLGRSG+L EA+  ++ M  EP
Sbjct: 758 LSACSHNGMVEEGYSHLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERFINNMPIEP 817

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
           DA +W  LL+AC+VHGD+ELG  AA  + ELEP  A  YV LSN+ +  G WED  ++R 
Sbjct: 818 DALLWGILLAACKVHGDIELGRLAAKRVIELEPCEAGAYVTLSNICADMGWWEDVMKIRS 877

Query: 665 LMKSRGIRKEPGCSWV 680
           LM+  G++KEPG S V
Sbjct: 878 LMEGTGVKKEPGWSSV 893



 Score =  279 bits (714), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 187/610 (30%), Positives = 315/610 (51%), Gaps = 24/610 (3%)

Query: 27  HNVGNSVKPASDLNRALVDFSNSG-------EIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           H+  ++V P  D      D++ SG       +I  A  L   +   + F  N+++  Y  
Sbjct: 34  HSTHDTVLPPFDPFHFFSDYTKSGRCTLRNTKILHAHFLKTAILQSNTFMTNSLMGWYCK 93

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYS-NYGLDIEAFELFWQMQLEGYRPSQYTLDN 138
           S  +  A +LF++TP  N  +W+ LI G + N+  + +++  F +M+  G+ P+Q+T  +
Sbjct: 94  SNSMVHALRLFDKTPHPNVISWNILISGCNQNFSFE-DSWRNFCKMRFSGFDPNQFTYGS 152

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD-- 196
           VL  C+  G    GE  +  A+K  F  N +V  G++D++AK  C FE     ++F D  
Sbjct: 153 VLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKL-CSFEDA--LRVFQDVL 209

Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
            +N V W  +I+G  +N   + A++ F  M       N FTF SILTACAA+   +FG  
Sbjct: 210 CENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRG 269

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           V G ++  G   +V+V +A+ID+YAKC D+D A +      I N VSW ++I GF ++  
Sbjct: 270 VQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDD 329

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
              A   FK+M     KI+++T  SVL      + +  A  +HS I KTGF     V++A
Sbjct: 330 SISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSA 389

Query: 377 LIDMYAKQGNLDCAFMVFNLMQD-KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
           LI+MY+K G +D +  VF  M+  K++  W  +I+  A  GS   A++ F  M   G+ P
Sbjct: 390 LINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRP 449

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           D    SS+LS    +  L  G+ +H   LK G  + +SV +SL  +Y+KCG + ++  VF
Sbjct: 450 DKFCSSSVLSI---IDSLSLGRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVF 506

Query: 496 DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAE 555
           + M  +D ++W ++I G +++   ++A+Q + +ML    +PD +T    L ACS     E
Sbjct: 507 EQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLE 566

Query: 556 NARWYFESMDKVYGIKPGPDHY--ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
             +   E        + G +      ++++  + G ++ A+ + D M+ + D     +L+
Sbjct: 567 KGK---EVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFD-MLPQKDQFSCSSLV 622

Query: 614 SACRVHGDLE 623
           S    +G +E
Sbjct: 623 SGYAQNGYIE 632



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 66/170 (38%), Gaps = 32/170 (18%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +S  G IDE  ++FE++   D  +W  MI +YA  G+  EA K+++              
Sbjct: 695 YSKCGSIDECHKVFEQIEKPDLISWTAMIVSYAQHGKGAEALKVYD-------------- 740

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG-EQFHGYAIKTCF 164
                             M+ EG +P   T   VL  CS  G+++ G    +  A +   
Sbjct: 741 -----------------LMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGI 783

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
           +   +    +VD+  +   + EAE      P   + + W  ++     +G
Sbjct: 784 EPGYYHYACMVDLLGRSGRLKEAERFINNMPIEPDALLWGILLAACKVHG 833


>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
 gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
 gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
 gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 641

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 222/531 (41%), Positives = 336/531 (63%), Gaps = 7/531 (1%)

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH---ARDIKIDDFTYPSV 342
           L SAR L +     +  +W++++ G+ R G  + AL+L+++M      D   ++FT  S 
Sbjct: 111 LPSARELFDRMPQRDHFAWSALVSGYTRHGQPEAALALYRRMQEEPGNDGADNEFTASSA 170

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFE---GYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
           L   A+       + +H  +V+ G +   G   + +AL DMYAK G +D A  VF+ M  
Sbjct: 171 LAAAAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRMPV 230

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDM-RISGICPDHVVVSSILSACAELTVLEFGQQ 458
           +D +SWT+++      G   E  + F  M R  G+ P+    + +L ACA+  V  FG+Q
Sbjct: 231 RDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAQFAVESFGRQ 290

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK 518
           VH    KSG   S   +++L+ +Y+KCG +  A RVF++M   D+++WTA+I G AQNG+
Sbjct: 291 VHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQ 350

Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA 578
            +EAL+++D  L  G KPD++TFVG+L AC+HAGL +     F S+ + Y I+   DHYA
Sbjct: 351 PEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYA 410

Query: 579 CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM 638
           C+IDLL RSG+   A+ ++  M  +P+  +W +LL  CR+H ++ L  RAA  LFE+EP 
Sbjct: 411 CVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAEALFEIEPE 470

Query: 639 NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPL 698
           N   YV L+N+Y++ G +++   VR++M+S+GI K P  SW+E   +VH+F+  D+ HP 
Sbjct: 471 NPATYVTLANIYASVGLFDEVEDVRRIMESKGITKMPASSWIEVGRRVHVFLVGDKSHPK 530

Query: 699 RTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA 758
             +IY+ + ++ + + E GYV D+ F LH+VE+E KE  + YHSE+LAVAFG++  P+G+
Sbjct: 531 ADEIYALLKKLYVKMVEEGYVADIEFVLHDVEDEQKEQDIGYHSERLAVAFGIIATPEGS 590

Query: 759 PIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           PI++FKNLR+CGDCH A+K IS +  R II+RDSNRFHHFK G CSC DYW
Sbjct: 591 PIKVFKNLRICGDCHAAIKLISQIVQRDIIVRDSNRFHHFKDGICSCRDYW 641



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 189/382 (49%), Gaps = 17/382 (4%)

Query: 47  SNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGR-LREAKKLFNETPFKNFFTWSSLI 105
           S+   + +A  LF  ++  D  + NT+I+A + S R L  A++LF+  P ++ F WS+L+
Sbjct: 74  SHPATLPDALALFSSIAAPDICSHNTLISALSRSPRHLPSARELFDRMPQRDHFAWSALV 133

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLL------QRGEQFHGYA 159
            GY+ +G    A  L+ +MQ E   P     DN     S           + G + H + 
Sbjct: 134 SGYTRHGQPEAALALYRRMQEE---PGNDGADNEFTASSALAAAAAARCGRAGRELHCHV 190

Query: 160 IKTCFDL---NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
           ++   D    +A + + L DMYAKC  + +A  +F   P  ++ V+WT M+  Y   G G
Sbjct: 191 VRRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRMP-VRDAVSWTAMVERYFDGGRG 249

Query: 217 FKAIECFRDM-RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSA 275
            +    F  M R  GV  N+FT+  +L ACA  +   FG QVHG +  SG   + + +SA
Sbjct: 250 GEGFRLFLHMLRTRGVRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESA 309

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           L+ MY+KCGD+ SA R+ E     + VSW ++I G+A+ G  +EAL  F       IK D
Sbjct: 310 LLRMYSKCGDMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPD 369

Query: 336 DFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA-FMV 393
             T+  VL+ C  + +     +  HS+  +   E        +ID+ ++ G  + A  M+
Sbjct: 370 HVTFVGVLSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMI 429

Query: 394 FNLMQDKDVISWTSLITGCAYH 415
            N+    +   W SL+ GC  H
Sbjct: 430 GNMAVKPNKFLWASLLGGCRIH 451



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 123/258 (47%), Gaps = 10/258 (3%)

Query: 374 NNALIDMYAKQG-NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI-- 430
           +N LI   ++   +L  A  +F+ M  +D  +W++L++G   HG  E AL  +  M+   
Sbjct: 97  HNTLISALSRSPRHLPSARELFDRMPQRDHFAWSALVSGYTRHGQPEAALALYRRMQEEP 156

Query: 431 -SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG---GCSSLSVDNSLVLVYAKCG 486
            +    +    SS L+A A       G+++H   ++ G         + ++L  +YAKCG
Sbjct: 157 GNDGADNEFTASSALAAAAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALADMYAKCG 216

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML-ARGTKPDYITFVGLL 545
            ++DA RVFD M  RD ++WTA++      G+G E  + +  ML  RG +P+  T+ G+L
Sbjct: 217 RVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVL 276

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
            AC+   +    R     M K  G        + ++ +  + G +  A  + + M  +PD
Sbjct: 277 RACAQFAVESFGRQVHGRMAK-SGTGDSCFAESALLRMYSKCGDMGSAVRVFEAM-AKPD 334

Query: 606 ATVWKALLSACRVHGDLE 623
              W A++S    +G  E
Sbjct: 335 LVSWTAVISGYAQNGQPE 352


>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 637

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 232/571 (40%), Positives = 339/571 (59%), Gaps = 1/571 (0%)

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
           SIL +C A  +   G Q+HG +L SG   +  + + L+D+YA CG +  ARRL +     
Sbjct: 67  SILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKR 126

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           N   WN +I  +AR+G  + A+ L++ M    ++ D+FTYP VL   A+ +DL   + VH
Sbjct: 127 NVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVH 186

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
             +  T +    FV   ++DMYAK G +D A  VF+ +  +D + W S+I     +G   
Sbjct: 187 QRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPM 246

Query: 420 EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
           EAL    DM  +GI P    + S +SA A+   L  G+++H    + G      +  SLV
Sbjct: 247 EALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLV 306

Query: 480 LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG-TKPDY 538
            +YAK G +  A  +F+ +  R++++W A+I G   +G   EAL  +++M       PD 
Sbjct: 307 DMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDN 366

Query: 539 ITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLD 598
           ITFVG+L AC+H G+ E A+ +F  M   Y IKP   HY C+ID+LG +G+  EA  L+ 
Sbjct: 367 ITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIK 426

Query: 599 QMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWED 658
            M  EPD+ +W ALL+ C++H ++ELGE A   L ELEP +A  YV LSN+Y+ +GKWE 
Sbjct: 427 GMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQSGKWEK 486

Query: 659 AARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGY 718
           AARVRKLM +RG++K   CSW+E   + H F+  D  HP   +IY +++ +  L+ +AGY
Sbjct: 487 AARVRKLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDEIYGELERLEGLMSDAGY 546

Query: 719 VPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKY 778
           VPD+    HNV+++ K   +  HSE+LA+AFGL++ P G  + + KNLRVC DCH  +K 
Sbjct: 547 VPDIIPVFHNVDDDEKRNMVRSHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCHVVIKL 606

Query: 779 ISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           IS +  R II+RD NR+HHF  G CSC DYW
Sbjct: 607 ISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 188/379 (49%), Gaps = 4/379 (1%)

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           ++L+ C   G L+ G Q HG  + +    +  + T LVD+YA C  +  A  LF   P  
Sbjct: 67  SILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPK- 125

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           +N   W  +I  Y++ G    A+  +R M   GVE + FT+P +L ACAA+   + G +V
Sbjct: 126 RNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREV 185

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           H  +  + +  +V+V + ++DMYAKCG +D AR + +   + + V WNSMI  + + G  
Sbjct: 186 HQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRP 245

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
            EAL+L + M A  I     T  S ++  A    L   + +H    + GF     +  +L
Sbjct: 246 MEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSL 305

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG-ICPD 436
           +DMYAK G +  A ++F  +  ++++SW ++I G   HG  +EAL  F+ M+    + PD
Sbjct: 306 VDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPD 365

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL-VYAKCGCINDANRVF 495
           ++    +LSAC    ++E  ++   + + +          + V+ V    G   +A  + 
Sbjct: 366 NITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLI 425

Query: 496 DSMHTR-DVITWTALIMGC 513
             M    D   W AL+ GC
Sbjct: 426 KGMSIEPDSGIWGALLNGC 444



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 116/374 (31%), Positives = 176/374 (47%), Gaps = 18/374 (4%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G+L       D      ++  YA  G++  A++LF+  P +N F W+ LI  Y+  G   
Sbjct: 86  GRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRNVFLWNVLIRAYAREGPRE 145

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
            A  L+  M   G  P  +T   VL+ C+    L+ G + H     T +  + FV  G+V
Sbjct: 146 AAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVV 205

Query: 176 DMYAKCKCIFEAEYLFKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
           DMYAKC C+ +A  +F    DG   ++ V W +MI  Y QNG   +A+   RDM   G+ 
Sbjct: 206 DMYAKCGCVDDARAVF----DGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGIG 261

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
               T  S ++A A  +A   G ++HG     GF     ++++L+DMYAK G +  AR L
Sbjct: 262 PTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVL 321

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA-RDIKIDDFTYPSVLNCFASNID 351
            E       VSWN+MI G+   G   EAL+LF KM     +  D+ T+  VL+       
Sbjct: 322 FEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVGVLSACNHGGM 381

Query: 352 LNNAKS-----VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISW 405
           +  AK      V++  +K   + Y  V    ID+    G  + A+ +   M  + D   W
Sbjct: 382 VEEAKEFFYLMVNAYSIKPTVQHYTCV----IDVLGHTGRFEEAYDLIKGMSIEPDSGIW 437

Query: 406 TSLITGCAYHGSYE 419
            +L+ GC  H + E
Sbjct: 438 GALLNGCKIHKNVE 451



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 160/380 (42%), Gaps = 51/380 (13%)

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
           + S+L    ++  L   + +H  ++ +G      ++  L+D+YA  G +  A  +F+ M 
Sbjct: 65  HTSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMP 124

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
            ++V  W  LI   A  G  E A++ +  M   G+ PD+     +L ACA L  LE G++
Sbjct: 125 KRNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGRE 184

Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK 518
           VH     +     + V   +V +YAKCGC++DA  VFD +  RD + W ++I    QNG+
Sbjct: 185 VHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGR 244

Query: 519 GKEALQFYDQMLARGTKPDYITF-----------------------------------VG 543
             EAL     M A G  P   T                                      
Sbjct: 245 PMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKTS 304

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           L+   + +G  + AR  FE + K   +      +  MI   G  G   EA AL ++M G+
Sbjct: 305 LVDMYAKSGWVQVARVLFEQLMKRELVS-----WNAMICGYGMHGHADEALALFNKMKGD 359

Query: 604 ----PDATVWKALLSACRVHGDLELGER---AANNLFELEPMNAMPYVQLSNMYSTAGKW 656
               PD   +  +LSAC   G +E  +       N + ++P     Y  + ++    G++
Sbjct: 360 AQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKP-TVQHYTCVIDVLGHTGRF 418

Query: 657 EDAARVRKLMKSRGIRKEPG 676
           E+A     L+K   I  + G
Sbjct: 419 EEA---YDLIKGMSIEPDSG 435



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 146/340 (42%), Gaps = 27/340 (7%)

Query: 42  ALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTW 101
           AL+D     E+ +  ++      +D F    ++  YA  G + +A+ +F+    ++   W
Sbjct: 175 ALLDLETGREVHQ--RVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVW 232

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIK 161
           +S+I  Y   G  +EA  L   M   G  P+  TL + +   +    L RG + HG+  +
Sbjct: 233 NSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWR 292

Query: 162 TCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIE 221
             F L   + T LVDMYAK   +  A  LF+     +  V+W  MI GY  +G+  +A+ 
Sbjct: 293 RGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMK-RELVSWNAMICGYGMHGHADEALA 351

Query: 222 CFRDMRVEG-VESNQFTFPSILTACAAVSARDFGAQVHGC-----ILSSGFEANVYVQ-- 273
            F  M+ +  V  +  TF  +L+AC      + G  V        ++ + +     VQ  
Sbjct: 352 LFNKMKGDAQVTPDNITFVGVLSAC------NHGGMVEEAKEFFYLMVNAYSIKPTVQHY 405

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIVGFARQGFHKEA----LSLFKKMH 328
           + +ID+    G  + A  L++   I+ +   W +++ G      HK      L+L K + 
Sbjct: 406 TCVIDVLGHTGRFEEAYDLIKGMSIEPDSGIWGALLNGCK---IHKNVELGELALQKLIE 462

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
                  ++ + S  N +A +     A  V  L+   G +
Sbjct: 463 LEPEDAGNYVHLS--NIYAQSGKWEKAARVRKLMTNRGLK 500


>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 734

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 247/659 (37%), Positives = 376/659 (57%), Gaps = 7/659 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPF--KNFFTWSSLIYGYS-NYGLDIEAF--ELFW 122
           +  NT +  YA +  L  A  LF+      K+  +W+SLI  +S N+     +F   LF 
Sbjct: 47  YVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFR 106

Query: 123 QM-QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
           +M +     P+ +TL  V    S    +  G+Q H  A+KT    + +V + L++MY K 
Sbjct: 107 RMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKT 166

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
             +F+A  LF   P+ +N V+W TMI+GY+ +    KA+E F  MR E    N+F   S+
Sbjct: 167 GFVFDARKLFDRMPE-RNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSV 225

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           L+A  +      G QVH   + +G  A V V +AL+ MYAKCG LD A R  E+S   N 
Sbjct: 226 LSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNS 285

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           ++W++M+ G+A+ G   +AL LF KMH+  +   +FT   V+N  +    +   K +HS 
Sbjct: 286 ITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSF 345

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
             K GF    +V +A++DMYAK G+L  A   F  +Q  DV+ WTS+ITG   +G YE  
Sbjct: 346 AFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGG 405

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           L  +  M++  + P+ + ++S+L AC+ L  L+ G+Q+HA  +K G    + + ++L  +
Sbjct: 406 LNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAM 465

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           Y KCG ++D   +F  M +RDVI+W A+I G +QNG G +AL+ +++ML  G KPD +TF
Sbjct: 466 YTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTF 525

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
           V LL ACSH GL +    YF+ M   + I P  +HYACM+D+L R+GKL EAK  ++   
Sbjct: 526 VNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESAT 585

Query: 602 GEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
            +    +W+ LL AC+ H + ELG  A   L EL    +  YV LS++Y+  G  E+  R
Sbjct: 586 VDHGLCLWRILLGACKNHRNYELGVYAGEKLVELGSPESSAYVLLSSIYTALGDRENVER 645

Query: 662 VRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
           VR++MK+RG+ KEPGCSW+E    VH+F+  D  HP   +I  +++ +  L+ + GY P
Sbjct: 646 VRRIMKARGVNKEPGCSWIELKGLVHVFVVGDNQHPQVDEIRLELELLTKLMIDEGYQP 704



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 151/510 (29%), Positives = 262/510 (51%), Gaps = 3/510 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +  ++++  Y  +G + +A+KLF+  P +N  +W+++I GY++  +  +A E+F  M+
Sbjct: 152 DVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMR 211

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            E    +++ L +VL   +    +  G Q H  AIK        V   LV MYAKC  + 
Sbjct: 212 REEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLD 271

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A   F+ F   KN + W+ M+TGY+Q G   KA++ F  M   GV  ++FT   ++ AC
Sbjct: 272 DAVRTFE-FSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINAC 330

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           + + A   G Q+H      GF   +YV SA++DMYAKCG L  AR+  E  +  + V W 
Sbjct: 331 SDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWT 390

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           S+I G+ + G ++  L+L+ KM    +  ++ T  SVL   +S   L+  K +H+ I+K 
Sbjct: 391 SIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKY 450

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           GF+    + +AL  MY K G+LD  +++F  M  +DVISW ++I+G + +G   +AL+ F
Sbjct: 451 GFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELF 510

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LVLVYAK 484
             M + GI PD V   ++LSAC+ + +++ G +   +       + +    + +V + ++
Sbjct: 511 EKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSR 570

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
            G +N+A    +S      +    +++G  +N +  E   +  + L     P+   +V L
Sbjct: 571 AGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELGSPESSAYVLL 630

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGP 574
               +  G  EN       M K  G+   P
Sbjct: 631 SSIYTALGDRENVERVRRIM-KARGVNKEP 659



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 170/574 (29%), Positives = 272/574 (47%), Gaps = 46/574 (8%)

Query: 129 YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
           + P    L   L  C+    + +G   H   +KT    + +V    +++YAK   +  A 
Sbjct: 7   FPPQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHAL 66

Query: 189 YLFKMFPDG-KNHVAWTTMITGYSQNGYGFK---AIECFRD-MRVEGVESNQFTFPSILT 243
            LF    D  K+ V+W ++I  +SQN        AI  FR  MR   V  N  T   + +
Sbjct: 67  TLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFS 126

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           A + +S    G Q H   + +G   +VYV S+L++MY K G +  AR+L +     N VS
Sbjct: 127 AASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVS 186

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           W +MI G+A      +A+ +F+ M   +   ++F   SVL+   S++ +   + VHSL +
Sbjct: 187 WATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAI 246

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K G      V NAL+ MYAK G+LD A   F    DK+ I+W++++TG A  G  ++ALK
Sbjct: 247 KNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALK 306

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            F+ M  SG+ P    +  +++AC++L  +  G+Q+H+   K G    L V +++V +YA
Sbjct: 307 LFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYA 366

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG + DA + F+ +   DV+ WT++I G  QNG  +  L  Y +M      P+ +T   
Sbjct: 367 KCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMAS 426

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIK-----------------------------PGP 574
           +L ACS     +  +     + K YG K                             P  
Sbjct: 427 VLRACSSLAALDQGKQMHARIIK-YGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSR 485

Query: 575 D--HYACMIDLLGRSGKLIEAKALLDQMVGE---PDATVWKALLSACRVHGDLELGERAA 629
           D   +  MI  L ++G   +A  L ++M+ E   PD   +  LLSAC   G ++ G    
Sbjct: 486 DVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYF 545

Query: 630 NNLFELEPMNAMPYVQ----LSNMYSTAGKWEDA 659
             +F  +  N  P V+    + ++ S AGK  +A
Sbjct: 546 KMMF--DEFNIAPMVEHYACMVDILSRAGKLNEA 577



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 213/451 (47%), Gaps = 66/451 (14%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  ++  G +D+A + FE   D++  TW+ M+  YA  G   +A KLFN        
Sbjct: 258 NALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFN-------- 309

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
                                  +M   G  PS++TL  V+  CS    +  G+Q H +A
Sbjct: 310 -----------------------KMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFA 346

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF--PDGKNHVAWTTMITGYSQNGYGF 217
            K  F L  +V++ +VDMYAKC  + +A   F+    PD    V WT++ITGY QNG   
Sbjct: 347 FKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPD---VVLWTSIITGYVQNGDYE 403

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
             +  +  M++E V  N+ T  S+L AC++++A D G Q+H  I+  GF+  V + SAL 
Sbjct: 404 GGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALS 463

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
            MY KCG LD    +       + +SWN+MI G ++ G   +AL LF+KM    IK D  
Sbjct: 464 AMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPV 523

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA------------LIDMYAKQG 385
           T+ ++L+  +           H  +V  G+E +K + +             ++D+ ++ G
Sbjct: 524 TFVNLLSACS-----------HMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAG 572

Query: 386 NLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD---HVVVS 441
            L+ A   + +   D  +  W  L+  C  H +YE  + Y  +  +    P+   +V++S
Sbjct: 573 KLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGV-YAGEKLVELGSPESSAYVLLS 631

Query: 442 SILSACAELTVLEFGQQVHAV--FLKSGGCS 470
           SI +A  +   +E  +++       K  GCS
Sbjct: 632 SIYTALGDRENVERVRRIMKARGVNKEPGCS 662


>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
 gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
          Length = 650

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 233/548 (42%), Positives = 325/548 (59%), Gaps = 6/548 (1%)

Query: 263 SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR-QGFHKEAL 321
           S G    ++V ++L+ MYAK G LD A RL +     N V+W +++   A   G  +EAL
Sbjct: 108 SGGAGGGIFVSNSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEAL 167

Query: 322 SLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMY 381
                M    +  + +T+ SVL    +   L    ++H+  VK G +   FV ++LID Y
Sbjct: 168 RFLVAMWRDGVAPNAYTFSSVLGACGTPGVL---AALHASTVKVGLDSDVFVRSSLIDAY 224

Query: 382 AKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVS 441
            K G+LD    VF+ M  +D++ W S+I G A  G    A++ F  M+ +G   +   ++
Sbjct: 225 MKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLT 284

Query: 442 SILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR 501
           S+L AC  + +LE G+QVHA  LK      L + N+L+ +Y KCG + DA  +F  M  R
Sbjct: 285 SVLRACTGMVMLEAGRQVHAHVLKYE--RDLILHNALLDMYCKCGSLEDAEALFHRMPQR 342

Query: 502 DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYF 561
           DVI+W+ +I G AQNGK  EAL+ +D M + G  P+ IT VG+LFACSHAGL E+  +YF
Sbjct: 343 DVISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYF 402

Query: 562 ESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGD 621
            SM K++GI+P  +H+ CM+DLLGR+GKL EA   +  M  EPDA +W+ LL ACR+H  
Sbjct: 403 RSMKKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKS 462

Query: 622 LELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVE 681
             L   AA  + +LEP +    V LSN Y+   +W DA +  K M+ RG++KEPG SW+E
Sbjct: 463 GNLAAYAAREILKLEPDDQGARVLLSNTYADLRQWTDAEKSWKAMRDRGMKKEPGRSWIE 522

Query: 682 TNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYH 741
               VH+FI+ D  HP    I  +++ ++  I   GYVP   F L ++  E KE  L YH
Sbjct: 523 LEKHVHVFIAGDLSHPCSDTIVQELNRLIGRISALGYVPQTEFVLQDLAIEQKEDLLKYH 582

Query: 742 SEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAG 801
           SEK+A+AFG +    G PIRI KNLR+CGDCH   K +S    R II+RD  RFHHF+ G
Sbjct: 583 SEKMAIAFGTMHAVGGKPIRIMKNLRICGDCHAFAKLVSKSEGRMIIIRDPVRFHHFQDG 642

Query: 802 NCSCGDYW 809
            CSCGDYW
Sbjct: 643 ACSCGDYW 650



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 197/404 (48%), Gaps = 17/404 (4%)

Query: 130 RPSQYTLDNVLRLCSLKG------LLQRGEQFHGYAIKTCFDLNA--FVVTGLVDMYAKC 181
           R    +L  +++LC   G      L+ R  + HG             FV   LV MYAK 
Sbjct: 69  RADPVSLTRLVKLCVRHGTAGDGRLIHRHVEAHGQLSHYSGGAGGGIFVSNSLVSMYAKF 128

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ-NGYGFKAIECFRDMRVEGVESNQFTFPS 240
             + +A  LF   P+ +N V WTT++   +  +G   +A+     M  +GV  N +TF S
Sbjct: 129 GLLDDALRLFDRMPE-RNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSS 187

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           +L AC         A +H   +  G +++V+V+S+LID Y K GDLD  RR+ +     +
Sbjct: 188 VLGACGTPGVL---AALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRD 244

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
            V WNS+I GFA+ G    A+ LF +M       +  T  SVL      + L   + VH+
Sbjct: 245 LVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHA 304

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
            ++K  +E    ++NAL+DMY K G+L+ A  +F+ M  +DVISW+++I+G A +G   E
Sbjct: 305 HVLK--YERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAE 362

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS-LSVDNSLV 479
           AL+ F  M+  G+ P+ + +  +L AC+   ++E G        K  G        N +V
Sbjct: 363 ALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREHHNCMV 422

Query: 480 LVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEA 522
            +  + G +++A      M+   D + W  L+  C  +  G  A
Sbjct: 423 DLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGNLA 466



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 184/381 (48%), Gaps = 11/381 (2%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNY-GLDIEAFELFWQMQL 126
           F  N++++ YA  G L +A +LF+  P +N  TW++++   +N  G   EA      M  
Sbjct: 116 FVSNSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWR 175

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
           +G  P+ YT  +VL  C   G+L      H   +K   D + FV + L+D Y K   +  
Sbjct: 176 DGVAPNAYTFSSVLGACGTPGVLA---ALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDG 232

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
              +F      ++ V W ++I G++Q+G G  AIE F  M+  G  +NQ T  S+L AC 
Sbjct: 233 GRRVFDEMVT-RDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACT 291

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            +   + G QVH  +L   +E ++ + +AL+DMY KCG L+ A  L       + +SW++
Sbjct: 292 GMVMLEAGRQVHAHVLK--YERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWST 349

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKT 365
           MI G A+ G   EAL +F  M +  +  +  T   VL  C  + +  +      S+    
Sbjct: 350 MISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLF 409

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
           G +  +  +N ++D+  + G LD A   + ++  + D + W +L+  C  H S    L  
Sbjct: 410 GIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGN--LAA 467

Query: 425 FSDMRISGICPDHVVVSSILS 445
           ++   I  + PD      +LS
Sbjct: 468 YAAREILKLEPDDQGARVLLS 488



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 131/247 (53%), Gaps = 5/247 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D F  +++I AY   G L   +++F+E   ++   W+S+I G++  G  + A ELF +
Sbjct: 211 DSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMR 270

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+  G+  +Q TL +VLR C+   +L+ G Q H + +K  ++ +  +   L+DMY KC  
Sbjct: 271 MKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAHVLK--YERDLILHNALLDMYCKCGS 328

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +AE LF   P  ++ ++W+TMI+G +QNG   +A+  F  M+ EGV  N+ T   +L 
Sbjct: 329 LEDAEALFHRMPQ-RDVISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLF 387

Query: 244 ACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NE 301
           AC+     + G      +    G +      + ++D+  + G LD A   +    ++ + 
Sbjct: 388 ACSHAGLVEDGWYYFRSMKKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDA 447

Query: 302 VSWNSMI 308
           V W +++
Sbjct: 448 VIWRTLL 454



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 6/123 (4%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN----ET 93
           L+ AL+D +   G +++A  LF +M  RD  +W+TMI+  A +G+  EA ++F+    E 
Sbjct: 315 LHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEALRVFDLMKSEG 374

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
              N  T   +++  S+ GL  + +  F  M +L G +P +   + ++ L    G L   
Sbjct: 375 VAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREHHNCMVDLLGRAGKLDEA 434

Query: 153 EQF 155
            +F
Sbjct: 435 VEF 437


>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
 gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
          Length = 1026

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 230/660 (34%), Positives = 384/660 (58%), Gaps = 5/660 (0%)

Query: 68   FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
            +  +++++ YA  G++  AKK+F+    +N   W++++ GY   G   E  ELF+ M+  
Sbjct: 363  YVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSC 422

Query: 128  GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
            G+ P  +T  ++L  C+    L  G Q H   IK  F  N FV   LVDMYAK   + +A
Sbjct: 423  GFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDA 482

Query: 188  EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
               F++  + +++V+W  +I GY Q     +A   FR M + G+  ++ +  SIL+ACA+
Sbjct: 483  RQQFELIRN-RDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACAS 541

Query: 248  VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
            V   + G QVH   + +G E  +Y  S+LIDMYAKCG +DSA ++L      + VS N++
Sbjct: 542  VRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNAL 601

Query: 308  IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
            I G+A+    ++A++LF+ M    I   + T+ S+L+       LN  + +HSLI+K G 
Sbjct: 602  IAGYAQINL-EQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGL 660

Query: 368  E-GYKFVNNALIDMYAKQ-GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
            +   +F+  +L+ MY       D + +       K  + WT++I+G + +     AL+ +
Sbjct: 661  QLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLY 720

Query: 426  SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             +MR   + PD     S L ACA ++ ++ G + H++   +G  S     ++LV +YAKC
Sbjct: 721  KEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKC 780

Query: 486  GCINDANRVFDSM-HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
            G +  + +VF  M   +DVI+W ++I+G A+NG  ++AL+ +D+M      PD +TF+G+
Sbjct: 781  GDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGV 840

Query: 545  LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
            L ACSH+G     R  F+ M  +YG++P  DH ACM+DLLGR G L EA+  ++++  EP
Sbjct: 841  LTACSHSGRVSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFINKLNFEP 900

Query: 605  DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
            DA VW  +L ACR+HGD   G++AA  L ELEP N+ PYV LSN+Y+ +G W++   +R+
Sbjct: 901  DAKVWATMLGACRIHGDDIRGQQAAEKLIELEPQNSSPYVLLSNIYAASGNWDEVNTLRR 960

Query: 665  LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
             M+ +G++K PGCSW+    + ++F++ D+ H   ++I + + ++  L++E  YV  ++F
Sbjct: 961  EMREKGVKKLPGCSWIVVGQETNMFVAGDKSHHSASEIDAILKDLTPLMRENDYVVQLDF 1020



 Score =  299 bits (765), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 192/560 (34%), Positives = 290/560 (51%), Gaps = 47/560 (8%)

Query: 59  FEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAF 118
           FE +S  +G     +I  YA    L +A+ +F+     +  +W+S+I GY   GL  EA 
Sbjct: 191 FESISYCEG----ALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAV 246

Query: 119 ELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMY 178
           ++F +M+  G  P Q     V+                          NA+V  G +D  
Sbjct: 247 KVFQEMEKVGQEPDQVAFVTVI--------------------------NAYVDLGRLD-- 278

Query: 179 AKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTF 238
                   A  LF   P+ +N VAW  MI+G+++ GYG +AIE F++MR  G++S + T 
Sbjct: 279 -------NASDLFSRMPN-RNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTL 330

Query: 239 PSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI 298
            S+L+A A+++A DFG  VH   L  G  +NVYV S+L+ MYAKCG +++A+++ +    
Sbjct: 331 GSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNE 390

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
            N V WN+M+ G+ + G+  E + LF  M +     DDFTY S+L+  A    L+    +
Sbjct: 391 QNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQL 450

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           HS+I+K  F    FV NAL+DMYAK G L+ A   F L++++D +SW  +I G       
Sbjct: 451 HSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDE 510

Query: 419 EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSL 478
            EA   F  M + GI PD V ++SILSACA +  LE G+QVH + +K+G  + L   +SL
Sbjct: 511 VEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSL 570

Query: 479 VLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDY 538
           + +YAKCG I+ A+++   M  R V++  ALI G AQ    ++A+  +  ML  G     
Sbjct: 571 IDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQINL-EQAVNLFRDMLVEGINSTE 629

Query: 539 ITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG---RSGKLIEAKA 595
           ITF  LL AC H     N      S+    G++   +     + LLG    S +  +A  
Sbjct: 630 ITFASLLDAC-HEQQKLNLGRQIHSLILKMGLQLDDEFLG--VSLLGMYMNSLRTTDASV 686

Query: 596 LLDQMVGEPDATVWKALLSA 615
           L  +      A VW A++S 
Sbjct: 687 LFSEFSNPKSAVVWTAMISG 706



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 168/597 (28%), Positives = 279/597 (46%), Gaps = 75/597 (12%)

Query: 17  SKIIGPARYTHNVGNSVKPAS---------DLNRALVDFSNSGEIDEAGQLFEKMSDRDG 67
           S  + P  YTH + N ++ +          ++ + L  FS + +I  A  L      + G
Sbjct: 36  SHTLKPRIYTHILQNCLQKSKQVKTHSLFDEIPQRLSQFSTTNKIIHAQSLKLGFWSK-G 94

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYG---LDIEAFELFWQM 124
              N ++  YA    +  A++ F +   K+   W+S++  +S  G   L ++ F L W  
Sbjct: 95  VLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWN- 153

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
              G  P+++T   VL  C+   +++ G Q H   +K  F+  ++    L+ MYAKC  +
Sbjct: 154 --SGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFL 211

Query: 185 FEAEYLFKMFPDGK---NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
            +A  +F    DG    + V+WT+MI GY + G   +A++ F++M   G E +Q  F ++
Sbjct: 212 TDARSIF----DGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTV 267

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           + A                                   Y   G LD+A  L       N 
Sbjct: 268 INA-----------------------------------YVDLGRLDNASDLFSRMPNRNV 292

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           V+WN MI G A+ G+  EA+  F+ M    IK    T  SVL+  AS   L+    VH+ 
Sbjct: 293 VAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAE 352

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
            +K G     +V ++L+ MYAK G ++ A  VF+ + +++V+ W +++ G   +G   E 
Sbjct: 353 ALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEV 412

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           ++ F +M+  G  PD    SSILSACA L  L+ G Q+H+V +K+   S+L V N+LV +
Sbjct: 413 MELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDM 472

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           YAK G + DA + F+ +  RD ++W  +I+G  Q     EA   + +M   G  PD ++ 
Sbjct: 473 YAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSL 532

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLD 598
             +L AC+                 V G++ G   + C+    G+  KL    +L+D
Sbjct: 533 ASILSACA----------------SVRGLEQGKQVH-CLSVKTGQETKLYSGSSLID 572



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 188/433 (43%), Gaps = 55/433 (12%)

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYS---QNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
           F  +  F   P+G NH + T     Y+   QN        C +  +     S     P  
Sbjct: 19  FHHQLTFSAIPNGSNHPSHTLKPRIYTHILQN--------CLQKSKQVKTHSLFDEIPQR 70

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           L+  +  +       +H   L  GF +   + + ++D+YAKC D+D A R  +  E  + 
Sbjct: 71  LSQFSTTNKI-----IHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDI 125

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           ++WNS++   ++QGF    +  F  +    +  ++FT+  VL+  A    +   + VH  
Sbjct: 126 LAWNSILSMHSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCN 185

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           +VK GFE   +   ALI MYAK   L  A  +F+   + D +SWTS+I G    G  EEA
Sbjct: 186 VVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEA 245

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           +K F +M   G  PD V   ++++A                                   
Sbjct: 246 VKVFQEMEKVGQEPDQVAFVTVINA----------------------------------- 270

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           Y   G +++A+ +F  M  R+V+ W  +I G A+ G G EA++F+  M   G K    T 
Sbjct: 271 YVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTL 330

Query: 542 VGLLFA-CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
             +L A  S A L      + E++ +  G+       + ++ +  + GK+  AK + D +
Sbjct: 331 GSVLSAIASLAALDFGLLVHAEALKQ--GLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTL 388

Query: 601 VGEPDATVWKALL 613
             E +  +W A+L
Sbjct: 389 -NEQNVVLWNAML 400



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 158/321 (49%), Gaps = 11/321 (3%)

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           K +H+  +K GF     + N ++D+YAK  ++D A   F  ++DKD+++W S+++  +  
Sbjct: 79  KIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQ 138

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G     +KYF  +  SG+ P+    + +LS+CA L +++ G+QVH   +K G  S    +
Sbjct: 139 GFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCE 198

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
            +L+ +YAKC  + DA  +FD     D ++WT++I G  + G  +EA++ + +M   G +
Sbjct: 199 GALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQE 258

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           PD + FV ++ A    G  +NA   F  M     +      +  MI    + G  +EA  
Sbjct: 259 PDQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVA-----WNLMISGHAKGGYGVEAIE 313

Query: 596 LLDQMVG---EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYV--QLSNMY 650
               M     +   +   ++LSA      L+ G        + + +++  YV   L +MY
Sbjct: 314 FFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALK-QGLHSNVYVGSSLVSMY 372

Query: 651 STAGKWEDAARVRKLMKSRGI 671
           +  GK E A +V   +  + +
Sbjct: 373 AKCGKMEAAKKVFDTLNEQNV 393



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 8/155 (5%)

Query: 58  LFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE-TPFKNFFTWSSLIYGYSNYGLDIE 116
           +F    D D  T + ++  YA  G ++ + ++F E +  K+  +W+S+I G++  G   +
Sbjct: 758 IFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAED 817

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT-CFDLNAFVVTGLV 175
           A  +F +M+     P   T   VL  CS  G +  G       +        A     +V
Sbjct: 818 ALRVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRADHCACMV 877

Query: 176 DMYAKCKCIFEAEYLFKMF---PDGKNHVAWTTMI 207
           D+  +   + EAE         PD K    W TM+
Sbjct: 878 DLLGRWGSLKEAEEFINKLNFEPDAK---VWATML 909



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 26/207 (12%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMS-DRDGFTWNTMIAAYANSGRLREAKKLFNE------T 93
           ALVD ++  G++  + Q+F++MS  +D  +WN+MI  +A +G   +A ++F+E      T
Sbjct: 772 ALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVT 831

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
           P  +  T+  ++   S+ G   E   +F  M  L G +P       ++ L    G L+  
Sbjct: 832 P--DDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEA 889

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE-------AEYLFKMFPDGKNHVAWTT 205
           E+F     K  F+ +A V      M   C+   +       AE L ++ P  +N   +  
Sbjct: 890 EEFIN---KLNFEPDAKV---WATMLGACRIHGDDIRGQQAAEKLIELEP--QNSSPYVL 941

Query: 206 MITGYSQNGYGFKAIECFRDMRVEGVE 232
           +   Y+ +G   +     R+MR +GV+
Sbjct: 942 LSNIYAASGNWDEVNTLRREMREKGVK 968


>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
 gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
          Length = 611

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 243/611 (39%), Positives = 365/611 (59%), Gaps = 8/611 (1%)

Query: 207 ITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR--DFGAQVHGCILSS 264
           +  +S NG   +A+  FR M   G   ++ TF  IL A A + A   D G ++H     S
Sbjct: 1   MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARIS 60

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLF 324
           G   NV V +A+I MY KCG LD AR   E  +  N V+WN+M+  +   G  +EAL LF
Sbjct: 61  GLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELF 120

Query: 325 KKM--HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK--FVNNALIDM 380
           ++M   +R  + D F++   +   ++  DL   + +H ++ + G E +K   V  AL++M
Sbjct: 121 REMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNM 180

Query: 381 YAKQGNLDCAFMVFN-LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR-ISGICPDHV 438
           Y+K G+L+ A  VF+ +  D D + W ++I   A HG  ++AL  +  M   + + P   
Sbjct: 181 YSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQG 240

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
              +++  CAEL+ L+ G+ +HA    +   ++L V N+LV +Y KCGC+++A  VF SM
Sbjct: 241 TFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSM 300

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENAR 558
             +D I+W  +I   A +G   +AL  Y +M  +G KP  +TFVGLL ACSH GL  +  
Sbjct: 301 KLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGL 360

Query: 559 WYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRV 618
            YF  M   + IKP   H+ C+IDLLGR G+L EA+ +L  M  + +A  W +LL AC+ 
Sbjct: 361 DYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKT 420

Query: 619 HGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCS 678
           HGDL+ G RAA+ + +  P  +  YV LSN+Y+ AG+W+D  ++RK+M +RG++K PG S
Sbjct: 421 HGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKS 480

Query: 679 WVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGL 738
           W+E    VH F+S DR HP   +IY ++ +++  +K  GYVPD +   H++EEE KE  L
Sbjct: 481 WIEIGDVVHEFVSGDRSHPQGEEIYVELGKMVEEMKGLGYVPDTSSVFHDLEEEEKEDLL 540

Query: 739 AYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHF 798
             HSEKLA+ +G + +P  + +RI KNLRVC DCHTA K++S +  R I++RD+ RFH F
Sbjct: 541 VCHSEKLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTATKFMSRITGRKIVVRDAARFHLF 600

Query: 799 KAGNCSCGDYW 809
           + G+CSC DYW
Sbjct: 601 ENGSCSCRDYW 611



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/444 (30%), Positives = 226/444 (50%), Gaps = 27/444 (6%)

Query: 107 GYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL--LQRGEQFHGYAIKTCF 164
            +S+ G   EA   F +M   G RP + T   +L   +  G   + +G + H YA  +  
Sbjct: 3   AFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGL 62

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
             N  V T ++ MY KC  + +A   F+     KN V W  M+T Y  +G   +A+E FR
Sbjct: 63  LPNVVVGTAVISMYGKCGRLDDARAAFEEL-QWKNSVTWNAMMTNYKLDGRDREALELFR 121

Query: 225 DM--RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFE--ANVYVQSALIDMY 280
           +M  R      ++F+F   + AC+ +   + G ++H  +   G E   +V V +AL++MY
Sbjct: 122 EMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMY 181

Query: 281 AKCGDLDSARRLLEYSEID-NEVSWNSMIVGFARQGFHKEALSLFKKMH-ARDIKIDDFT 338
           +KCGDL+ AR++ +    D + V WN+MI  +A+ G  K+AL L++ MH   D+     T
Sbjct: 182 SKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGT 241

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
           + +V++  A    L   +++H+ +  T F+    V+NAL+ MY K G LD A  VF+ M+
Sbjct: 242 FVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMK 301

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG-- 456
            KD ISW ++I+  AYHG  ++AL  + +M + G+ P  V    +LSAC+   ++  G  
Sbjct: 302 LKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLD 361

Query: 457 -----QQVHAV--FLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTA 508
                Q  H +   +   GC        ++ +  + G + +A  V  SM  + + + W +
Sbjct: 362 YFYRMQDDHRIKPSVPHFGC--------IIDLLGRGGRLAEAELVLKSMPIQANAVQWMS 413

Query: 509 LIMGCAQNGKGKEALQFYDQMLAR 532
           L+  C  +G  K  ++  DQ++ R
Sbjct: 414 LLGACKTHGDLKRGVRAADQVVDR 437



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 202/411 (49%), Gaps = 31/411 (7%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM--QLEG 128
             +I+ Y   GRL +A+  F E  +KN  TW++++  Y   G D EA ELF +M  +   
Sbjct: 70  TAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMCERSRS 129

Query: 129 YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG--LVDMYAKCKCIFE 186
            RP +++    +  CS    L++G + H    +   +L+  VV G  L++MY+KC  + E
Sbjct: 130 ARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCGDLEE 189

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR-VEGVESNQFTFPSILTAC 245
           A  +F       + V W  MI  Y+Q+G G +A++ +R M     +   Q TF +++  C
Sbjct: 190 ARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVC 249

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A +SA   G  +H  + ++ F+AN+ V +AL+ MY KCG LD A  +    ++ +E+SWN
Sbjct: 250 AELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWN 309

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           ++I  +A  G   +AL L+++M  + +K  + T+  +L+  +           H  +V  
Sbjct: 310 TIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACS-----------HGGLVAD 358

Query: 366 GFEGYKFVNN------------ALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGC 412
           G + +  + +             +ID+  + G L  A +V   M    + + W SL+  C
Sbjct: 359 GLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGAC 418

Query: 413 AYHGSYEEALKYFSDM--RISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
             HG  +  ++    +  R+      +V++S+I +A      +E  +++ A
Sbjct: 419 KTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMA 469



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 157/350 (44%), Gaps = 39/350 (11%)

Query: 16  RSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIA 75
           RS+   P +++ ++  +++  S+L     D     EI E  +   K   +D      ++ 
Sbjct: 126 RSRSARPDKFSFSI--AIEACSNLE----DLEQGREIHEMLRREGKELHKDVVVGTALLN 179

Query: 76  AYANSGRLREAKKLFNETPFK-NFFTWSSLIYGYSNYGLDIEAFELFWQMQ-LEGYRPSQ 133
            Y+  G L EA+K+F+      +   W+++I  Y+ +G   +A +L+  M       P Q
Sbjct: 180 MYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQ 239

Query: 134 YTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKM 193
            T   V+ +C+    L++G   H     T FD N  V   LV MY KC C+ EA  +F  
Sbjct: 240 GTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHS 299

Query: 194 FPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDF 253
               K+ ++W T+I+ Y+ +G+  +A+  +++M ++GV+  + TF  +L+AC+       
Sbjct: 300 MK-LKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACS------- 351

Query: 254 GAQVHGCILSSGFEANVYVQ------------SALIDMYAKCGDLDSARRLLEYSEID-N 300
               HG +++ G +    +Q              +ID+  + G L  A  +L+   I  N
Sbjct: 352 ----HGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQAN 407

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
            V W S++      G       L + + A D  +D   + S      SNI
Sbjct: 408 AVQWMSLLGACKTHG------DLKRGVRAADQVVDRVPWTSGGYVLLSNI 451


>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Vitis vinifera]
          Length = 694

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 226/584 (38%), Positives = 358/584 (61%), Gaps = 6/584 (1%)

Query: 232 ESNQFTF-----PSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDL 286
           E++QF        S++ A ++ ++  + + +H  ++ S   ++ ++   L+ MY K G  
Sbjct: 111 EASQFIVVYSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYD 170

Query: 287 DSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK-IDDFTYPSVLNC 345
           + A+RL +     + VSWNS++ G + +G+    L+ F +M     +  ++ T  SV++ 
Sbjct: 171 EDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSA 230

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
            A    L+  KS+H ++VK G  G   V N+LI+MY K G LD A  +F  M  + ++SW
Sbjct: 231 CADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSW 290

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
            S++    ++G  E+ +  F+ M+ +GI PD   + ++L AC +  +    + +HA   +
Sbjct: 291 NSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHR 350

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
            G  + + +  +L+ +YAK G +N +  +F+ +  RD I WTA++ G A +  G+EA++ 
Sbjct: 351 CGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKL 410

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
           +D M+  G + D++TF  LL ACSH+GL E  + YFE M +VY ++P  DHY+CM+DLLG
Sbjct: 411 FDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLG 470

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ 645
           RSG+L +A  L+  M  EP + VW ALL ACRV+G++ELG+  A  L  L+P +   Y+ 
Sbjct: 471 RSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIM 530

Query: 646 LSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSK 705
           LSN+YS AG W DA++VR LMK R + + PGCS++E  +++H F+  D+ HP   +I++K
Sbjct: 531 LSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTK 590

Query: 706 IDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKN 765
           ++E++  I+EAG  P   F LH+++EE K   +  HSEKLA+AFGLL    G P+ I KN
Sbjct: 591 LEELIRKIREAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKN 650

Query: 766 LRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           LR+CGDCH+  K+ S +  R II+RDS RFHHF  G CSC DYW
Sbjct: 651 LRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 694



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 203/406 (50%), Gaps = 5/406 (1%)

Query: 155 FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
            H   IK+    + F+   LV MY K     +A+ LF   P+ K+ V+W ++++G S  G
Sbjct: 141 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPN-KDLVSWNSLMSGLSGRG 199

Query: 215 YGFKAIECFRDMRVE-GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
           Y    +  F  MR E G + N+ T  S+++ACA + A D G  +HG ++  G      V 
Sbjct: 200 YLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVV 259

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
           ++LI+MY K G LD+A +L E   + + VSWNSM+V     G+ ++ + LF  M    I 
Sbjct: 260 NSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGIN 319

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
            D  T  ++L           A+S+H+ I + GF     +  AL+++YAK G L+ +  +
Sbjct: 320 PDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDI 379

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           F  ++D+D I+WT+++ G A H    EA+K F  M   G+  DHV  + +LSAC+   ++
Sbjct: 380 FEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLV 439

Query: 454 EFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVI-TWTALIM 511
           E G++   +  +       L   + +V +  + G + DA  +  SM        W AL+ 
Sbjct: 440 EEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLG 499

Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENA 557
            C   G  +   +  +Q+L+     D+  ++ L    S AGL  +A
Sbjct: 500 ACRVYGNVELGKEVAEQLLSLDPS-DHRNYIMLSNIYSAAGLWRDA 544



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 205/401 (51%), Gaps = 16/401 (3%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            ++ + ++  DGF  + +++ Y   G   +A++LF+E P K+  +W+SL+ G S  G   
Sbjct: 143 ARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLG 202

Query: 116 EAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
                F +M+ E G +P++ TL +V+  C+  G L  G+  HG  +K      A VV  L
Sbjct: 203 ACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSL 262

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           ++MY K   +  A  LF+  P  ++ V+W +M+  ++ NGY  K ++ F  M+  G+  +
Sbjct: 263 INMYGKLGFLDAASQLFEEMPV-RSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPD 321

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
           Q T  ++L AC           +H  I   GF A++ + +AL+++YAK G L+++  + E
Sbjct: 322 QATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFE 381

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
             +  + ++W +M+ G+A     +EA+ LF  M    +++D  T+  +L+  + +  +  
Sbjct: 382 EIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEE 441

Query: 355 AKSVHSLI-----VKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSL 408
            K    ++     V+   + Y    + ++D+  + G L+ A+ ++ ++  +     W +L
Sbjct: 442 GKKYFEIMSEVYRVEPRLDHY----SCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGAL 497

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDH---VVVSSILSA 446
           +  C  +G+ E   K  ++  +S    DH   +++S+I SA
Sbjct: 498 LGACRVYGNVELG-KEVAEQLLSLDPSDHRNYIMLSNIYSA 537



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 126/261 (48%), Gaps = 35/261 (13%)

Query: 36  ASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF 95
           A  +N  +  +   G +D A QLFE+M  R   +WN+M+  + ++               
Sbjct: 256 AKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHN--------------- 300

Query: 96  KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
                      GY+  G+D     LF  M+  G  P Q T+  +LR C+  GL ++ E  
Sbjct: 301 -----------GYAEKGMD-----LFNLMKRAGINPDQATMVALLRACTDTGLGRQAESI 344

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGY 215
           H Y  +  F+ +  + T L+++YAK   +  +E +F+   D ++ +AWT M+ GY+ +  
Sbjct: 345 HAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKD-RDRIAWTAMLAGYAVHAC 403

Query: 216 GFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF--EANVYVQ 273
           G +AI+ F  M  EGVE +  TF  +L+AC+     + G +    I+S  +  E  +   
Sbjct: 404 GREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFE-IMSEVYRVEPRLDHY 462

Query: 274 SALIDMYAKCGDLDSARRLLE 294
           S ++D+  + G L+ A  L++
Sbjct: 463 SCMVDLLGRSGRLEDAYELIK 483


>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
 gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
          Length = 627

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 246/627 (39%), Positives = 354/627 (56%), Gaps = 38/627 (6%)

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ----VHGCILSSGFEANVYVQS 274
           A+  +  M   G   + +TFP++L A A  +     A     VH  ++  G   N +V S
Sbjct: 3   AVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVAS 62

Query: 275 ALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKI 334
           +L+  Y   GD  +AR L+   E D  V+WN++I G  R G   E+   F  M       
Sbjct: 63  SLVAAYTAGGDGAAARALV--GECDTPVAWNALISGHNRGGRFGESCGSFVDMARAGAAP 120

Query: 335 DDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
              TY SVL+ C     D+     VH  +V +G      V NAL+DMYA+  ++  A+ V
Sbjct: 121 TPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKV 180

Query: 394 FNLMQDKDVISWTSLITGCAYHGS-------------------------------YEEAL 422
           F+ MQ + V+SWTSL++G A  G                                + EAL
Sbjct: 181 FDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREAL 240

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
           + F +M+ S +  D   + S+++ACA+L  LE G+ V     + G      V N+L+ +Y
Sbjct: 241 EMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMY 300

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
           +KCG I  A  VF  MH RD  TWTA+I+G A NG  +EA++ + +M+     PD +TF+
Sbjct: 301 SKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFI 360

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
           G+L AC+HAGL +  R +F SM + Y I P   HY C+IDLLGR+GK+ EA   +DQM  
Sbjct: 361 GVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPM 420

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
            P++T+W  LL+ACRVHG+ E+GE  A  L EL+P N+M Y+ LSN+Y+   +WED  R+
Sbjct: 421 TPNSTIWGTLLAACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRL 480

Query: 663 RKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDM 722
           R  +  +GI+KEPGCS +E +  +H F++ D+ HP+  +IYSK++ I+  +   GY PD+
Sbjct: 481 RHAIMEKGIKKEPGCSLIEMDGIIHEFVAGDQSHPMSKEIYSKLESIISDLNNVGYFPDV 540

Query: 723 NFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAV 782
                 V E+ K+  L +HSEKLA+AF LL+      IRI KNLR+C DCH A+K IS +
Sbjct: 541 TEVFVEVAEKEKKKVLYWHSEKLAIAFALLSSKPNTVIRIVKNLRMCLDCHNAIKLISRL 600

Query: 783 YLRHIILRDSNRFHHFKAGNCSCGDYW 809
           Y R +++RD  RFHHF+ G CSC DYW
Sbjct: 601 YGREVVVRDRTRFHHFRHGFCSCKDYW 627



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 200/444 (45%), Gaps = 43/444 (9%)

Query: 116 EAFELFWQMQLEGYRPSQYT----LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV 171
           +A   + +M   G RP  YT    L  V R     G        H + ++     NA V 
Sbjct: 2   DAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVA 61

Query: 172 TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV 231
           + LV  Y        A  L     +    VAW  +I+G+++ G   ++   F DM   G 
Sbjct: 62  SSLVAAYTAGGDGAAARALVG---ECDTPVAWNALISGHNRGGRFGESCGSFVDMARAGA 118

Query: 232 ESNQFTFPSILTACAAVSARD--FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
                T+ S+L+AC     RD   G QVHG ++ SG   ++ V++AL+DMYA+C D+ SA
Sbjct: 119 APTPVTYVSVLSACGK-GTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSA 177

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQG-------------------------------FHK 318
            ++ +  ++ + VSW S++ G AR G                                 +
Sbjct: 178 WKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFR 237

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           EAL +F++M   ++  D+FT  SV+   A    L   + V   + + G +   FV NALI
Sbjct: 238 EALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALI 297

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
           DMY+K G+++ A  VF  M  +D  +WT++I G A +G  EEA++ F  M      PD V
Sbjct: 298 DMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEV 357

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL-VYAKCGCINDANRVFDS 497
               +L+AC    +++ G++     +++   +   V    ++ +  + G I +A    D 
Sbjct: 358 TFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQ 417

Query: 498 M-HTRDVITWTALIMGCAQNGKGK 520
           M  T +   W  L+  C  +G  +
Sbjct: 418 MPMTPNSTIWGTLLAACRVHGNSE 441



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 145/296 (48%), Gaps = 4/296 (1%)

Query: 16  RSKIIGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMI 74
           R  ++G   +   VG+ V P   +  ALVD ++   ++  A ++F+ M  R   +W +++
Sbjct: 137 RDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLL 196

Query: 75  AAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQY 134
           +  A  G++ EA+ LF+  P ++  +W+++I GY       EA E+F +MQ       ++
Sbjct: 197 SGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEF 256

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
           T+ +V+  C+  G L+ GE    Y  +    ++AFV   L+DMY+KC  I  A  +FK  
Sbjct: 257 TMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGM 316

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
              ++   WT +I G + NGY  +AIE F  M       ++ TF  +LTAC      D G
Sbjct: 317 HH-RDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKG 375

Query: 255 AQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
            +    ++ +     NV     +ID+  + G +  A   ++   +  N   W +++
Sbjct: 376 REFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLL 431



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 189/424 (44%), Gaps = 59/424 (13%)

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL--LQRGEQFHG 157
            W++LI G++  G   E+   F  M   G  P+  T  +VL  C  KG   +  G Q HG
Sbjct: 89  AWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACG-KGTRDVLLGMQVHG 147

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCK-------------------------------CIFE 186
             + +    +  V   LVDMYA+C                                 + E
Sbjct: 148 RVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDE 207

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A  LF   P+ ++ V+WT MI GY       +A+E FR+M+   V +++FT  S++TACA
Sbjct: 208 ARDLFDRMPE-RDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACA 266

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            + A + G  V   +   G + + +V +ALIDMY+KCG ++ A  + +     ++ +W +
Sbjct: 267 QLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTA 326

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKT 365
           +I+G A  G+ +EA+ +F +M       D+ T+  VL  C  + +     +   S+I   
Sbjct: 327 IILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMI--- 383

Query: 366 GFEGYKFVNNA-----LIDMYAKQGNLDCAFMVFNLM-QDKDVISWTSLITGCAYHGSYE 419
             E Y    N      +ID+  + G +  A    + M    +   W +L+  C  HG+ E
Sbjct: 384 --EAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSE 441

Query: 420 EALKYFSDMRISGICPD----HVVVSSILSACAELTVLEFGQQVHAV----FLKSGGCSS 471
             +      R+  + P+    ++++S+I + C      +  +  HA+      K  GCS 
Sbjct: 442 --IGELVAERLLELDPENSMVYILLSNIYAKCNRWE--DVRRLRHAIMEKGIKKEPGCSL 497

Query: 472 LSVD 475
           + +D
Sbjct: 498 IEMD 501



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 3/151 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N +I  Y+  G +  A  +F     ++ FTW+++I G +  G + EA E+F +M 
Sbjct: 289 DAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMI 348

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV--TGLVDMYAKCKC 183
                P + T   VL  C+  GL+ +G +F    I+  +++   VV    ++D+  +   
Sbjct: 349 RVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEA-YNIAPNVVHYGCIIDLLGRAGK 407

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
           I EA       P   N   W T++     +G
Sbjct: 408 ITEALDTIDQMPMTPNSTIWGTLLAACRVHG 438


>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 224/569 (39%), Positives = 352/569 (61%), Gaps = 4/569 (0%)

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           +++C +VS   + + +H  ++ S   ++ ++   L+ MY K G  + A+RL +     + 
Sbjct: 72  ISSCTSVS---YCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDL 128

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
           VSWNS++ G + +G+    L+ F +M      + ++ T  SV++  A    L+  KS+H 
Sbjct: 129 VSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHG 188

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
           ++VK G  G   V N+LI+MY K G LD A  +F  M  + ++SW S++    ++G  E+
Sbjct: 189 VVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEK 248

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
            +  F+ M+ +GI PD   + ++L AC +  +    + +HA   + G  + + +  +L+ 
Sbjct: 249 GMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLN 308

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           +YAK G +N +  +F+ +  RD I WTA++ G A +  G+EA++ +D M+  G + D++T
Sbjct: 309 LYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVT 368

Query: 541 FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
           F  LL ACSH+GL E  + YFE M +VY ++P  DHY+CM+DLLGRSG+L +A  L+  M
Sbjct: 369 FTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSM 428

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAA 660
             EP + VW ALL ACRV+G++ELG+  A  L  L+P +   Y+ LSN+YS AG W DA+
Sbjct: 429 PMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDAS 488

Query: 661 RVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
           +VR LMK R + + PGCS++E  +++H F+  D+ HP   +I++K++E++  I+EAG  P
Sbjct: 489 KVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAP 548

Query: 721 DMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYIS 780
              F LH+++EE K   +  HSEKLA+AFGLL    G P+ I KNLR+CGDCH+  K+ S
Sbjct: 549 KTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFAS 608

Query: 781 AVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            +  R II+RDS RFHHF  G CSC DYW
Sbjct: 609 LLEKRTIIIRDSKRFHHFADGLCSCRDYW 637



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 203/406 (50%), Gaps = 5/406 (1%)

Query: 155 FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
            H   IK+    + F+   LV MY K     +A+ LF   P+ K+ V+W ++++G S  G
Sbjct: 84  IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPN-KDLVSWNSLMSGLSGRG 142

Query: 215 YGFKAIECFRDMRVE-GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
           Y    +  F  MR E G + N+ T  S+++ACA + A D G  +HG ++  G      V 
Sbjct: 143 YLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVV 202

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
           ++LI+MY K G LD+A +L E   + + VSWNSM+V     G+ ++ + LF  M    I 
Sbjct: 203 NSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGIN 262

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
            D  T  ++L           A+S+H+ I + GF     +  AL+++YAK G L+ +  +
Sbjct: 263 PDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDI 322

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           F  ++D+D I+WT+++ G A H    EA+K F  M   G+  DHV  + +LSAC+   ++
Sbjct: 323 FEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLV 382

Query: 454 EFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVI-TWTALIM 511
           E G++   +  +       L   + +V +  + G + DA  +  SM        W AL+ 
Sbjct: 383 EEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLG 442

Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENA 557
            C   G  +   +  +Q+L+     D+  ++ L    S AGL  +A
Sbjct: 443 ACRVYGNVELGKEVAEQLLSLDPS-DHRNYIMLSNIYSAAGLWRDA 487



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 205/401 (51%), Gaps = 16/401 (3%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            ++ + ++  DGF  + +++ Y   G   +A++LF+E P K+  +W+SL+ G S  G   
Sbjct: 86  ARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLG 145

Query: 116 EAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
                F +M+ E G +P++ TL +V+  C+  G L  G+  HG  +K      A VV  L
Sbjct: 146 ACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSL 205

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           ++MY K   +  A  LF+  P  ++ V+W +M+  ++ NGY  K ++ F  M+  G+  +
Sbjct: 206 INMYGKLGFLDAASQLFEEMP-VRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPD 264

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
           Q T  ++L AC           +H  I   GF A++ + +AL+++YAK G L+++  + E
Sbjct: 265 QATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFE 324

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
             +  + ++W +M+ G+A     +EA+ LF  M    +++D  T+  +L+  + +  +  
Sbjct: 325 EIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEE 384

Query: 355 AKSVHSLI-----VKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSL 408
            K    ++     V+   + Y    + ++D+  + G L+ A+ ++ ++  +     W +L
Sbjct: 385 GKKYFEIMSEVYRVEPRLDHY----SCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGAL 440

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDH---VVVSSILSA 446
           +  C  +G+ E   K  ++  +S    DH   +++S+I SA
Sbjct: 441 LGACRVYGNVELG-KEVAEQLLSLDPSDHRNYIMLSNIYSA 480



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 172/341 (50%), Gaps = 13/341 (3%)

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
           S++   +S   ++   ++H+ ++K+      F+ + L+ MY K G  + A  +F+ M +K
Sbjct: 67  SLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNK 126

Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRI-SGICPDHVVVSSILSACAELTVLEFGQQV 459
           D++SW SL++G +  G     L  F  MR  SG  P+ V + S++SACA++  L+ G+ +
Sbjct: 127 DLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSL 186

Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKG 519
           H V +K G      V NSL+ +Y K G ++ A+++F+ M  R +++W ++++    NG  
Sbjct: 187 HGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYA 246

Query: 520 KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC 579
           ++ +  ++ M   G  PD  T V LL AC+  GL   A      + +  G          
Sbjct: 247 EKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRC-GFNADIIIATA 305

Query: 580 MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELE--- 636
           +++L  + G+L  ++ + ++ + + D   W A+L+   VH       R A  LF+L    
Sbjct: 306 LLNLYAKLGRLNASEDIFEE-IKDRDRIAWTAMLAGYAVHA----CGREAIKLFDLMVKE 360

Query: 637 --PMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEP 675
              ++ + +  L +  S +G  E+  +  ++M S   R EP
Sbjct: 361 GVEVDHVTFTHLLSACSHSGLVEEGKKYFEIM-SEVYRVEP 400



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 126/261 (48%), Gaps = 35/261 (13%)

Query: 36  ASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF 95
           A  +N  +  +   G +D A QLFE+M  R   +WN+M+  + ++               
Sbjct: 199 AKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHN--------------- 243

Query: 96  KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
                      GY+  G+D     LF  M+  G  P Q T+  +LR C+  GL ++ E  
Sbjct: 244 -----------GYAEKGMD-----LFNLMKRAGINPDQATMVALLRACTDTGLGRQAESI 287

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGY 215
           H Y  +  F+ +  + T L+++YAK   +  +E +F+   D ++ +AWT M+ GY+ +  
Sbjct: 288 HAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKD-RDRIAWTAMLAGYAVHAC 346

Query: 216 GFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF--EANVYVQ 273
           G +AI+ F  M  EGVE +  TF  +L+AC+     + G +    I+S  +  E  +   
Sbjct: 347 GREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFE-IMSEVYRVEPRLDHY 405

Query: 274 SALIDMYAKCGDLDSARRLLE 294
           S ++D+  + G L+ A  L++
Sbjct: 406 SCMVDLLGRSGRLEDAYELIK 426



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 81/163 (49%), Gaps = 2/163 (1%)

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
           +V S++ A +  T + +   +HA  +KS   S   + + LV +Y K G   DA R+FD M
Sbjct: 64  IVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 123

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR-GTKPDYITFVGLLFACSHAGLAENA 557
             +D+++W +L+ G +  G     L  + +M    G +P+ +T + ++ AC+  G  +  
Sbjct: 124 PNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEG 183

Query: 558 RWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
           +     + K+ G+         +I++ G+ G L  A  L ++M
Sbjct: 184 KSLHGVVVKL-GMSGKAKVVNSLINMYGKLGFLDAASQLFEEM 225


>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 762

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 242/608 (39%), Positives = 352/608 (57%), Gaps = 9/608 (1%)

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
           + ++I   S +    +A+  +  M   G++ +  T+P ++ AC   S   FG  VH  ++
Sbjct: 163 YNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVV 222

Query: 263 SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
            SGFE + Y+ S+LI +YA   DL +A++L       + VSWN+MI G+ +      A  
Sbjct: 223 KSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARM 282

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYA 382
           +F +M  RD+     ++ +++N +A    ++ AK +   + +     +    N+++  + 
Sbjct: 283 VFDRMVCRDV----ISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSW----NSMLAGFV 334

Query: 383 KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
           K GN++ AF +F+ M  +DV+SW S++   A  G   EAL  F  MR  G+ P    V S
Sbjct: 335 KCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVS 394

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
           +LSACA L  L+ G  +H     +    +  V  +LV +YAKCG I+ A +VF++M ++D
Sbjct: 395 LLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKD 454

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
           V+ W  +I G A +G  KEA Q + +M   G +P+ ITFV +L ACSHAG+ +  +   +
Sbjct: 455 VLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLD 514

Query: 563 SMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDL 622
            M   YGI+P  +HY C+IDLL R+G L EA  L+  M  EP+ +   ALL  CR+HG+ 
Sbjct: 515 CMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNF 574

Query: 623 ELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVET 682
           ELGE     L  L+P ++  Y+ LSN+Y+ A KW+DA +VR LMK  GI K PG S +E 
Sbjct: 575 ELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIEL 634

Query: 683 NSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA-GYVPDMNFALHNVEEEGKEIGLAYH 741
              VH F++ D  HP    IY K++EI   +K A GY  D    L ++EEE KE  LA H
Sbjct: 635 KGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVH 694

Query: 742 SEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAG 801
           SEKLA+A+GLL L     IRI KNLRVC DCH  +K IS VY R II+RD NRFHHF+ G
Sbjct: 695 SEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRNRFHHFEDG 754

Query: 802 NCSCGDYW 809
            CSC D+W
Sbjct: 755 ECSCLDFW 762



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 214/437 (48%), Gaps = 11/437 (2%)

Query: 83  LREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRL 142
           L  AK +F+         ++SLI   S+    +EA  L+  M   G +P   T   V++ 
Sbjct: 145 LAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKA 204

Query: 143 CSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVA 202
           C+   +   G   H + +K+ F+ ++++V+ L+ +YA  K +  A+ LF +    ++ V+
Sbjct: 205 CNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLC-SARDVVS 263

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
           W  MI GY ++     A   F  M    V     ++ +++   A V   D   +    + 
Sbjct: 264 WNAMIDGYVKHVEMGHARMVFDRMVCRDV----ISWNTMINGYAIVGKIDEAKR----LF 315

Query: 263 SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
               E N+   ++++  + KCG+++ A  L       + VSWNSM+  +A+ G   EAL+
Sbjct: 316 DEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALA 375

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYA 382
           LF +M A  +K  + T  S+L+  A    L+    +H+ I     E    V  AL+DMYA
Sbjct: 376 LFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYA 435

Query: 383 KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
           K G +  A  VFN M+ KDV++W ++I G A HG+ +EA + F +M+ +G+ P+ +   +
Sbjct: 436 KCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVA 495

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL-VYAKCGCINDANRVFDSMHTR 501
           ILSAC+   +++ GQ++      S G          V+ + A+ G + +A  +  +M   
Sbjct: 496 ILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPME 555

Query: 502 -DVITWTALIMGCAQNG 517
            +     AL+ GC  +G
Sbjct: 556 PNPSALGALLGGCRIHG 572



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 92/275 (33%), Positives = 154/275 (56%), Gaps = 2/275 (0%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  ++  G+IDEA +LF++M +R+  +WN+M+A +   G + +A  LF+E P ++  
Sbjct: 296 NTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVV 355

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           +W+S++  Y+  G   EA  LF QM+  G +P++ T+ ++L  C+  G L +G   H Y 
Sbjct: 356 SWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYI 415

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
                ++N+ V T LVDMYAKC  I  A  +F    + K+ +AW T+I G + +G   +A
Sbjct: 416 NDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAM-ESKDVLAWNTIIAGMAIHGNVKEA 474

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALID 278
            + F++M+  GVE N  TF +IL+AC+     D G ++  C+ SS G E  V     +ID
Sbjct: 475 QQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVID 534

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           + A+ G L+ A  L+    ++   S    ++G  R
Sbjct: 535 LLARAGFLEEAMELIGTMPMEPNPSALGALLGGCR 569



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 190/398 (47%), Gaps = 39/398 (9%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +  +++I  YAN   L  AK+LFN    ++  +W+++I GY  +     A  +F +M 
Sbjct: 229 DSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRM- 287

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI-------KTCFD----LNAFVVTGL 174
                           +C  + ++      +GYAI       K  FD     N      +
Sbjct: 288 ----------------VC--RDVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSM 329

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           +  + KC  + +A  LF   P  ++ V+W +M+  Y+Q G   +A+  F  MR  GV+  
Sbjct: 330 LAGFVKCGNVEDAFGLFSEMP-CRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPT 388

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
           + T  S+L+ACA + A D G  +H  I  +  E N  V +AL+DMYAKCG +  A ++  
Sbjct: 389 EATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFN 448

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLN 353
             E  + ++WN++I G A  G  KEA  LFK+M    ++ +D T+ ++L+ C  + +   
Sbjct: 449 AMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDE 508

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGC 412
             K +  +    G E        +ID+ A+ G L+ A  +   M  + +  +  +L+ GC
Sbjct: 509 GQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGC 568

Query: 413 AYHGSYEEALKYFSDMRISGICPDH----VVVSSILSA 446
             HG++E  L      R+  + P H    +++S+I +A
Sbjct: 569 RIHGNFE--LGEMVGKRLINLQPCHSGRYILLSNIYAA 604



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 163/367 (44%), Gaps = 43/367 (11%)

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN-LDCAFMVFNLMQ 398
           P +L+ F     L + K VH+ I+      ++    A +   +     L  A  +F+ +Q
Sbjct: 97  PQILSLFNPCKTLRHLKQVHAQIITHHNSPFQLSALASLSALSPFPTFLAYAKTIFHHLQ 156

Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
           +     + SLI   +   +  EAL  +  M  SG+ PDH+    ++ AC E +V  FG  
Sbjct: 157 NPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLL 216

Query: 459 VHAVFLKSG-GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
           VH   +KSG  C S  V +SL+ +YA    +  A ++F+    RDV++W A+I G  ++ 
Sbjct: 217 VHTHVVKSGFECDSYIV-SSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHV 275

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDK----------- 566
           +   A   +D+M+ R    D I++  ++   +  G  + A+  F+ M +           
Sbjct: 276 EMGHARMVFDRMVCR----DVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLA 331

Query: 567 -------------VYGIKPGPD--HYACMIDLLGRSGKLIEAKALLDQM--VG-EPDATV 608
                        ++   P  D   +  M+    + GK  EA AL DQM  VG +P    
Sbjct: 332 GFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEAT 391

Query: 609 WKALLSACRVHGDLELG----ERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
             +LLSAC   G L+ G        +N  E+   N++    L +MY+  GK   A +V  
Sbjct: 392 VVSLLSACAHLGALDKGLHLHTYINDNRIEV---NSIVGTALVDMYAKCGKISLATQVFN 448

Query: 665 LMKSRGI 671
            M+S+ +
Sbjct: 449 AMESKDV 455


>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Glycine max]
          Length = 635

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 244/621 (39%), Positives = 361/621 (58%), Gaps = 29/621 (4%)

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR-DFG 254
           +  N +A   +I  Y + G    A+  F DM+V+    +  T+ SIL A A      ++ 
Sbjct: 37  NNNNVIASNKLIASYVRCGDIDSAVRVFEDMKVK----STVTWNSILAAFAKKPGHFEYA 92

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
            Q+   I     + N    + ++  +     +  AR   +   + +  SWN+MI   A+ 
Sbjct: 93  RQLFEKIP----QPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQV 148

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA------KSVHSLIVKTGFE 368
           G   EA  LF  M  ++      ++ ++++ + +  DL+ A        + S+I  T   
Sbjct: 149 GLMGEARRLFSAMPEKNC----VSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWT--- 201

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
                  A+I  Y K G ++ A  +F  M  + +++W ++I G   +G  E+ L+ F  M
Sbjct: 202 -------AMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTM 254

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
             +G+ P+ + ++S+L  C+ L+ L+ G+QVH +  K    S  +   SLV +Y+KCG +
Sbjct: 255 LETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDL 314

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
            DA  +F  +  +DV+ W A+I G AQ+G GK+AL+ +D+M   G KPD+ITFV +L AC
Sbjct: 315 KDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLAC 374

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           +HAGL +    YF +M + +GI+  P+HYACM+DLLGR+GKL EA  L+  M  +P   +
Sbjct: 375 NHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAI 434

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           +  LL ACR+H +L L E AA NL EL+P  A  YVQL+N+Y+   +W+  A +R+ MK 
Sbjct: 435 YGTLLGACRIHKNLNLAEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKD 494

Query: 669 RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHN 728
             + K PG SW+E NS VH F S DR HP    I+ K+ ++   +K AGYVPD+ F LH+
Sbjct: 495 NNVVKIPGYSWIEINSVVHGFRSSDRLHPELASIHEKLKDLEKKMKLAGYVPDLEFVLHD 554

Query: 729 VEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHII 788
           V EE KE  L +HSEKLA+AFGLL +P G PIR+FKNLRVCGDCH+A KYIS +  R II
Sbjct: 555 VGEELKEQLLLWHSEKLAIAFGLLKVPLGVPIRVFKNLRVCGDCHSATKYISTIEGREII 614

Query: 789 LRDSNRFHHFKAGNCSCGDYW 809
           +RD+ RFHHFK G CSC DYW
Sbjct: 615 VRDTTRFHHFKDGFCSCRDYW 635



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 120/246 (48%), Gaps = 2/246 (0%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS 109
           G++D A + F     R   TW  MI  Y   GR+  A++LF E   +   TW+++I GY 
Sbjct: 180 GDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYV 239

Query: 110 NYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAF 169
             G   +   LF  M   G +P+  +L +VL  CS    LQ G+Q H    K     +  
Sbjct: 240 ENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTT 299

Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
             T LV MY+KC  + +A  LF   P  K+ V W  MI+GY+Q+G G KA+  F +M+ E
Sbjct: 300 AGTSLVSMYSKCGDLKDAWELFIQIPR-KDVVCWNAMISGYAQHGAGKKALRLFDEMKKE 358

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDS 288
           G++ +  TF ++L AC      D G Q    +    G E      + ++D+  + G L  
Sbjct: 359 GLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSE 418

Query: 289 ARRLLE 294
           A  L++
Sbjct: 419 AVDLIK 424



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 192/438 (43%), Gaps = 37/438 (8%)

Query: 8   ILNFSLRCRSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDG 67
           +L  S    SK +    + H   N+   AS  N+ +  +   G+ID A ++FE M  +  
Sbjct: 15  LLTSSFVTLSKYVSSHTHQHEFNNNNVIAS--NKLIASYVRCGDIDSAVRVFEDMKVKST 72

Query: 68  FTWNTMIAAYANS-GRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL 126
            TWN+++AA+A   G    A++LF + P  N  +++ ++  + ++    +A   F  M L
Sbjct: 73  VTWNSILAAFAKKPGHFEYARQLFEKIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPL 132

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQR-------------GEQFHGYAIKTCFDLNAFVV-- 171
           +    S  T+ + L    L G  +R                  GY    C DL+A V   
Sbjct: 133 KDV-ASWNTMISALAQVGLMGEARRLFSAMPEKNCVSWSAMVSGYV--ACGDLDAAVECF 189

Query: 172 -----------TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAI 220
                      T ++  Y K   +  AE LF+     +  V W  MI GY +NG     +
Sbjct: 190 YAAPMRSVITWTAMITGYMKFGRVELAERLFQEM-SMRTLVTWNAMIAGYVENGRAEDGL 248

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
             FR M   GV+ N  +  S+L  C+ +SA   G QVH  +      ++    ++L+ MY
Sbjct: 249 RLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMY 308

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
           +KCGDL  A  L       + V WN+MI G+A+ G  K+AL LF +M    +K D  T+ 
Sbjct: 309 SKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFV 368

Query: 341 SVLNC--FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
           +VL     A  +DL   +  +++    G E        ++D+  + G L  A  +   M 
Sbjct: 369 AVLLACNHAGLVDL-GVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMP 427

Query: 399 DKDVIS-WTSLITGCAYH 415
            K   + + +L+  C  H
Sbjct: 428 FKPHPAIYGTLLGACRIH 445


>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 614

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 232/613 (37%), Positives = 356/613 (58%), Gaps = 8/613 (1%)

Query: 201 VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
             W T +   ++     +A+  +  M   G   N FTFP  L +CAA+S    G+Q HG 
Sbjct: 6   TPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQ 65

Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE--YSEIDNEVSWNSMIVGFARQGFHK 318
           I   G     +VQ+ LI MY K   +D+AR++ E  +      V +N+++ G+       
Sbjct: 66  ITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCS 125

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           +A+ LF++M+   + ++  T   ++    S I+L    S+H   +K GF+    V N  I
Sbjct: 126 DAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFI 185

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
            MY K G+++ A  +F+ M  K +ISW ++++G A +G     L+ + +M ++G+ PD V
Sbjct: 186 TMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPV 245

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
            +  +LS+CA L     G +V      SG  S+  ++N+L+ +YA+CG +  A  VFD M
Sbjct: 246 TLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGM 305

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENAR 558
             R +++WTA+I G   +G G+ A+Q + +M+  G +PD   FV +L ACSHAGL +   
Sbjct: 306 PERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGL 365

Query: 559 WYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRV 618
            YF+ M + Y ++PGP+HY+CM+DLLGR+G+L EA+ L++ M  +PD  VW ALL AC++
Sbjct: 366 EYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKI 425

Query: 619 HGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCS 678
           H ++EL E A   + ELEP N   YV LSN+YS A   +   R+R +MK + ++K+PGCS
Sbjct: 426 HKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCS 485

Query: 679 WVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKE--I 736
           +VE   +VH FI  DR H    +IY  ++E+  +I +    P+ +    N EE  K+   
Sbjct: 486 YVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKD----NREESNKDGFT 541

Query: 737 GLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFH 796
            +  HSEKLAVAFGLL    GA + I KNLR+C DCH   K +S +  R + +RD+ RFH
Sbjct: 542 RVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVRDATRFH 601

Query: 797 HFKAGNCSCGDYW 809
           HF+ G+CSC DYW
Sbjct: 602 HFRNGSCSCKDYW 614



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 201/405 (49%), Gaps = 9/405 (2%)

Query: 115 IEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
           ++A  L+ QM   G RP+ +T    L+ C+   L   G QFHG   K       FV TGL
Sbjct: 22  LQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGL 81

Query: 175 VDMYAKCKCIFEAEYLFKM-FPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
           + MY K   +  A  +F+  F   K  V +  +++GY  N     A+  FR M  EGV  
Sbjct: 82  ISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPV 141

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
           N  T   ++ AC +    + G+ +H   L  GF+++V V +  I MY KCG ++ A++L 
Sbjct: 142 NSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLF 201

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
           +   +   +SWN+M+ G+A+ G     L L++ M    +  D  T   VL+  A+    +
Sbjct: 202 DEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQS 261

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
               V   +  +GF    F+NNALI+MYA+ GNL  A  VF+ M ++ ++SWT++I G  
Sbjct: 262 VGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYG 321

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV----LEFGQQVHAVFLKSGGC 469
            HG  E A++ F +M  SGI PD      +LSAC+   +    LE+ + +   +    G 
Sbjct: 322 MHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGP 381

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
              S    +V +  + G + +A  + +SM  + D   W AL+  C
Sbjct: 382 EHYSC---MVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGAC 423



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 201/429 (46%), Gaps = 35/429 (8%)

Query: 32  SVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN 91
           ++K  + L+  ++     G+I + G +FE       F    +I+ Y     +  A+K+F 
Sbjct: 46  ALKSCAALSLPILGSQFHGQITKVGCVFEP------FVQTGLISMYCKGSLVDNARKVFE 99

Query: 92  ETPFKNFFT--WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLL 149
           E       T  +++L+ GY +     +A  LF QM  EG   +  TL  ++  C     L
Sbjct: 100 ENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINL 159

Query: 150 QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
           + G   H   +K  FD +  VV   + MY KC  +  A+ LF   P  K  ++W  M++G
Sbjct: 160 ELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPV-KGLISWNAMVSG 218

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
           Y+QNG     +E +R+M + GV  +  T   +L++CA + A+  G +V   + +SGF +N
Sbjct: 219 YAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSN 278

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA 329
            ++ +ALI+MYA+CG+L  A+ + +       VSW ++I G+   G  + A+ LFK+M  
Sbjct: 279 PFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIR 338

Query: 330 RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN------------NAL 377
             I+ D   +  VL+  +           H+ +   G E +K +             + +
Sbjct: 339 SGIEPDGTAFVCVLSACS-----------HAGLTDQGLEYFKMMKRNYQLEPGPEHYSCM 387

Query: 378 IDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           +D+  + G L  A  +   M  K D   W +L+  C  H + E A   F   R+  + P+
Sbjct: 388 VDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFE--RVIELEPE 445

Query: 437 HVVVSSILS 445
           ++    +LS
Sbjct: 446 NIGYYVLLS 454


>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
 gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
          Length = 562

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 226/559 (40%), Positives = 335/559 (59%), Gaps = 3/559 (0%)

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           G ++H  +   GF      Q+ L+ MYAKCG LD AR +         VSW++MI  +A 
Sbjct: 4   GRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYAL 63

Query: 314 QGFHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG--FEGY 370
            G  +EAL LF +M     ++ +  T+  V N      DL   + +H+L + +G      
Sbjct: 64  HGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSN 123

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
             + NAL++MY + G+L+ A  VF+ M   D  SWTS+IT C  +    EAL+ F  M +
Sbjct: 124 AILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNL 183

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
            GI P  V ++S+L+ACA    L+ G+Q+H+    SG  SS+    +L+ +YAKCG +  
Sbjct: 184 EGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLEC 243

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           +++VF +M TR+ ++WTA+I   AQ+G+G EAL+ + +M   G   D  TF+ +L ACSH
Sbjct: 244 SSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSH 303

Query: 551 AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
           AGL + +  +F SM + Y I P   HY   +D +GR+G+L +A+ L+  M   P+   WK
Sbjct: 304 AGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWK 363

Query: 611 ALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRG 670
            LL+ACR+H   E   + A  L +L P ++M Y  L N+Y+  G++ D  RVRK M  RG
Sbjct: 364 TLLNACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGMTDRG 423

Query: 671 IRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVE 730
           ++K PG S++E  ++VH F++ DR HP R +I  +++++   ++EAGYVP+    LH V 
Sbjct: 424 LKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVLHAVN 483

Query: 731 EEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILR 790
           EE KE  +  HSEKLA+AFGL+  P G P+ I KNLRVC DCH A K I+ +  R I++R
Sbjct: 484 EEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRRIVVR 543

Query: 791 DSNRFHHFKAGNCSCGDYW 809
           D++RFHHF+ G CSC DYW
Sbjct: 544 DTHRFHHFEDGQCSCKDYW 562



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 205/423 (48%), Gaps = 39/423 (9%)

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
           ++ G + H       F        GLV MYAKC C+ EA  +F    + +  V+W+ MI 
Sbjct: 1   MEEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILE-RTVVSWSAMIG 59

Query: 209 GYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACAAVSARDFGAQVHGCILSSG-- 265
            Y+ +G G +A+  F  MR +G VE N  TF  +  AC  +   + G ++H   ++SG  
Sbjct: 60  AYALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGEL 119

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
             +N  +++AL++MY +CG L+ AR++ +  +  +  SW SMI          EAL LF 
Sbjct: 120 KSSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFH 179

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           +M+   I     T  SVLN  A +  L   K +HS +  +GF        AL+DMYAK G
Sbjct: 180 RMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCG 239

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
           +L+C+  VF  M+ ++ +SWT++I   A HG  +EAL+ F +M + G+  D      +L 
Sbjct: 240 SLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLR 299

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA----------------KCGCIN 489
           AC+           HA  +K     SL   +S+V  YA                + G + 
Sbjct: 300 ACS-----------HAGLIK----ESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQ 344

Query: 490 DANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI--TFVGLLF 546
           DA  +  SM    + +TW  L+  C  + + + A +   ++L++    D +  T +G ++
Sbjct: 345 DAEELIHSMPFHPETLTWKTLLNACRIHSQAERATKVA-ELLSKLAPEDSMAYTLLGNVY 403

Query: 547 ACS 549
           A +
Sbjct: 404 AAT 406



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 199/402 (49%), Gaps = 12/402 (2%)

Query: 52  IDEAGQLFEKMS----DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYG 107
           ++E  ++  ++S     R     N +++ YA  G L EA+ +FN    +   +WS++I  
Sbjct: 1   MEEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGA 60

Query: 108 YSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT--CF 164
           Y+ +G   EA  LF +M+ +G   P+  T   V   C +   L++G + H  A+ +    
Sbjct: 61  YALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELK 120

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
             NA +   L++MY +C  + EA  +F    D  +  +WT+MIT  ++N    +A+E F 
Sbjct: 121 SSNAILENALLNMYVRCGSLEEARKVFDTM-DHPDAFSWTSMITACTENCELLEALELFH 179

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
            M +EG+     T  S+L ACA   A   G Q+H  + +SGF ++V  Q+AL+DMYAKCG
Sbjct: 180 RMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCG 239

Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
            L+ + ++    E  N VSW +MI   A+ G   EAL LFK+M+   +  D  T+  VL 
Sbjct: 240 SLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLR 299

Query: 345 -CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL-DCAFMVFNLMQDKDV 402
            C  + +   + +  HS++        +      +D   + G L D   ++ ++    + 
Sbjct: 300 ACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPET 359

Query: 403 ISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
           ++W +L+  C  H   E A K      +S + P+  +  ++L
Sbjct: 360 LTWKTLLNACRIHSQAERATKVAE--LLSKLAPEDSMAYTLL 399



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 143/273 (52%), Gaps = 5/273 (1%)

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
           +   + +HS +   GF       N L+ MYAK G LD A  +FN + ++ V+SW+++I  
Sbjct: 1   MEEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGA 60

Query: 412 CAYHGSYEEALKYFSDMRISG-ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
            A HG  +EAL  F  MR  G + P+ +  + + +AC  +  LE G+++HA+ + SG   
Sbjct: 61  YALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELK 120

Query: 471 SLS--VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
           S +  ++N+L+ +Y +CG + +A +VFD+M   D  +WT++I  C +N +  EAL+ + +
Sbjct: 121 SSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHR 180

Query: 529 MLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSG 588
           M   G  P  +T   +L AC+ +G  +  +     +D   G          ++D+  + G
Sbjct: 181 MNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLD-ASGFHSSVLAQTALLDMYAKCG 239

Query: 589 KLIEAKALLDQMVGEPDATVWKALLSACRVHGD 621
            L E  + +   +   ++  W A+++A   HG 
Sbjct: 240 SL-ECSSKVFTAMETRNSVSWTAMIAALAQHGQ 271



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 106/202 (52%), Gaps = 1/202 (0%)

Query: 45  DFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSL 104
           D     EI        ++   +    N ++  Y   G L EA+K+F+     + F+W+S+
Sbjct: 102 DLEQGREIHALAMASGELKSSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSM 161

Query: 105 IYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCF 164
           I   +     +EA ELF +M LEG  P+  TL +VL  C+  G L+ G+Q H     + F
Sbjct: 162 ITACTENCELLEALELFHRMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGF 221

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
             +    T L+DMYAKC  +  +  +F    + +N V+WT MI   +Q+G G +A+E F+
Sbjct: 222 HSSVLAQTALLDMYAKCGSLECSSKVFTAM-ETRNSVSWTAMIAALAQHGQGDEALELFK 280

Query: 225 DMRVEGVESNQFTFPSILTACA 246
           +M +EG+ ++  TF  +L AC+
Sbjct: 281 EMNLEGMVADATTFICVLRACS 302



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 120/262 (45%), Gaps = 53/262 (20%)

Query: 453 LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMG 512
           +E G+++H+     G   +    N LV +YAKCGC+++A  +F+ +  R V++W+A+I  
Sbjct: 1   MEEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGA 60

Query: 513 CAQNGKGKEALQFYDQMLARG-TKPDYITFVGLLFACS-----------HA--------- 551
            A +G+G+EAL  + +M   G  +P+ +TF G+  AC            HA         
Sbjct: 61  YALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELK 120

Query: 552 -----------------GLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAK 594
                            G  E AR  F++MD      P    +  MI     + +L+EA 
Sbjct: 121 SSNAILENALLNMYVRCGSLEEARKVFDTMD-----HPDAFSWTSMITACTENCELLEAL 175

Query: 595 ALLDQMVGE---PDATVWKALLSACRVHGDLELGERAANNL----FELEPMNAMPYVQLS 647
            L  +M  E   P +    ++L+AC   G L++G++  + L    F     + +    L 
Sbjct: 176 ELFHRMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFH---SSVLAQTALL 232

Query: 648 NMYSTAGKWEDAARVRKLMKSR 669
           +MY+  G  E +++V   M++R
Sbjct: 233 DMYAKCGSLECSSKVFTAMETR 254


>gi|302785459|ref|XP_002974501.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
 gi|300158099|gb|EFJ24723.1| hypothetical protein SELMODRAFT_101455 [Selaginella moellendorffii]
          Length = 635

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 230/573 (40%), Positives = 342/573 (59%), Gaps = 6/573 (1%)

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           L  C + +A   G ++H  I+  GF+++ Y+ + L++MY KCG L +A+ +   +   N 
Sbjct: 64  LRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLLVEMYGKCGSLQAAKSVFHITPRRNV 123

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
            SW  M+  FA  G + +AL+L + M    I  +  T+  +L   A+   L+  +++H  
Sbjct: 124 FSWTIMVAAFAHNGHYMDALNLLEIMDLEGISPNSITFIELLGAVAALSWLDRGRALHRR 183

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           I   GF    FV N LI+MYAK  +L  A  VF  +  + VI+WT+L+   A +G + +A
Sbjct: 184 IACCGFLADIFVANCLINMYAKCRSLADACSVFESLTSRSVIAWTALVAAYALNGFFRDA 243

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           LK F  M + G+ P  V   +++  CA++ V   G++VH V + +   +++ V N+L+ +
Sbjct: 244 LKVFLLMTLDGVEPTEVTFVTVVDVCADIAVFGIGREVHGV-IDARSEANVCVGNALINM 302

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR-----GTKP 536
           Y KC   ++A +VFD+M  +D+ITW ++I    QNG G +AL+ Y +M        G   
Sbjct: 303 YGKCASPDEARKVFDAMQRKDIITWNSMIAVYGQNGYGFQALEIYKRMQESRMTILGITH 362

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           D ITF+G+LFACSHAGL +++   + SM   YG KP      C+IDLLGR+G L EA+  
Sbjct: 363 DDITFIGVLFACSHAGLVKDSCKLYSSMIGDYGFKPTSLQCGCLIDLLGRAGWLDEAEEF 422

Query: 597 LDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
           ++ M   PD T+W  LL AC  H D+E   RAA+ +  L P ++  YV LSN+Y+ A +W
Sbjct: 423 INSMPYHPDHTIWTILLGACITHADVERAARAADRIMALRPTDSGSYVALSNLYALAERW 482

Query: 657 EDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA 716
           +D AR+RKLM  RG+ K  G S +E    +H FI+ D  HP + +IY ++  I  +I+E 
Sbjct: 483 DDMARMRKLMDQRGVFKMAGKSSIEIGGVLHEFIAGDTSHPRKREIYEELRRIEGVIRER 542

Query: 717 GYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAM 776
           GYVPD+   LHN   E KE    +HSE+LA+AFG+++ P G  +RI KNLRVC DCH+A 
Sbjct: 543 GYVPDIKAVLHNAAREAKEKMCCFHSERLAIAFGMISSPGGTELRIMKNLRVCPDCHSAT 602

Query: 777 KYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           K IS    R II+RD+NRFH F+ G+CSC DYW
Sbjct: 603 KIISKFSGRKIIVRDANRFHEFRNGSCSCEDYW 635



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 186/360 (51%), Gaps = 9/360 (2%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++  Y   G L+ AK +F+ TP +N F+W+ ++  +++ G  ++A  L   M LEG  
Sbjct: 96  NLLVEMYGKCGSLQAAKSVFHITPRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGIS 155

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+  T   +L   +    L RG   H       F  + FV   L++MYAKC+ + +A  +
Sbjct: 156 PNSITFIELLGAVAALSWLDRGRALHRRIACCGFLADIFVANCLINMYAKCRSLADACSV 215

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F+     ++ +AWT ++  Y+ NG+   A++ F  M ++GVE  + TF +++  CA ++ 
Sbjct: 216 FESLT-SRSVIAWTALVAAYALNGFFRDALKVFLLMTLDGVEPTEVTFVTVVDVCADIAV 274

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              G +VHG ++ +  EANV V +ALI+MY KC   D AR++ +  +  + ++WNSMI  
Sbjct: 275 FGIGREVHG-VIDARSEANVCVGNALINMYGKCASPDEARKVFDAMQRKDIITWNSMIAV 333

Query: 311 FARQGFHKEALSLFKKMHARDIKI-----DDFTYPSVL-NCFASNIDLNNAKSVHSLIVK 364
           + + G+  +AL ++K+M    + I     DD T+  VL  C  + +  ++ K   S+I  
Sbjct: 334 YGQNGYGFQALEIYKRMQESRMTILGITHDDITFIGVLFACSHAGLVKDSCKLYSSMIGD 393

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALK 423
            GF+        LID+  + G LD A    N M    D   WT L+  C  H   E A +
Sbjct: 394 YGFKPTSLQCGCLIDLLGRAGWLDEAEEFINSMPYHPDHTIWTILLGACITHADVERAAR 453



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 204/408 (50%), Gaps = 9/408 (2%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           PS   L   LR C  +  +  G++ H + +   F  + ++   LV+MY KC  +  A+ +
Sbjct: 55  PSAEVLAWYLRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLLVEMYGKCGSLQAAKSV 114

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F + P  +N  +WT M+  ++ NG+   A+     M +EG+  N  TF  +L A AA+S 
Sbjct: 115 FHITPR-RNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGISPNSITFIELLGAVAALSW 173

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            D G  +H  I   GF A+++V + LI+MYAKC  L  A  + E     + ++W +++  
Sbjct: 174 LDRGRALHRRIACCGFLADIFVANCLINMYAKCRSLADACSVFESLTSRSVIAWTALVAA 233

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           +A  GF ++AL +F  M    ++  + T+ +V++  A        + VH  ++    E  
Sbjct: 234 YALNGFFRDALKVFLLMTLDGVEPTEVTFVTVVDVCADIAVFGIGREVHG-VIDARSEAN 292

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF----- 425
             V NALI+MY K  + D A  VF+ MQ KD+I+W S+I     +G   +AL+ +     
Sbjct: 293 VCVGNALINMYGKCASPDEARKVFDAMQRKDIITWNSMIAVYGQNGYGFQALEIYKRMQE 352

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD-NSLVLVYAK 484
           S M I GI  D +    +L AC+   +++   ++++  +   G    S+    L+ +  +
Sbjct: 353 SRMTILGITHDDITFIGVLFACSHAGLVKDSCKLYSSMIGDYGFKPTSLQCGCLIDLLGR 412

Query: 485 CGCINDANRVFDSM-HTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
            G +++A    +SM +  D   WT L+  C  +   + A +  D+++A
Sbjct: 413 AGWLDEAEEFINSMPYHPDHTIWTILLGACITHADVERAARAADRIMA 460



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 111/234 (47%), Gaps = 8/234 (3%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N +I  YA    L +A  +F     ++   W++L+  Y+  G   +A ++F  M 
Sbjct: 192 DIFVANCLINMYAKCRSLADACSVFESLTSRSVIAWTALVAAYALNGFFRDALKVFLLMT 251

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           L+G  P++ T   V+ +C+   +   G + HG  I    + N  V   L++MY KC    
Sbjct: 252 LDGVEPTEVTFVTVVDVCADIAVFGIGREVHG-VIDARSEANVCVGNALINMYGKCASPD 310

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR-----VEGVESNQFTFPS 240
           EA  +F      K+ + W +MI  Y QNGYGF+A+E ++ M+     + G+  +  TF  
Sbjct: 311 EARKVFDAMQR-KDIITWNSMIAVYGQNGYGFQALEIYKRMQESRMTILGITHDDITFIG 369

Query: 241 ILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLL 293
           +L AC+         +++  ++   GF+        LID+  + G LD A   +
Sbjct: 370 VLFACSHAGLVKDSCKLYSSMIGDYGFKPTSLQCGCLIDLLGRAGWLDEAEEFI 423



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 5/202 (2%)

Query: 419 EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSL 478
            +A++   D  +S   P   V++  L  C     +  G+++H   +  G  SS  + N L
Sbjct: 42  RDAVQLLEDRSVS---PSAEVLAWYLRRCGSEAAIAEGKRIHYHIVLCGFKSSRYLCNLL 98

Query: 479 VLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDY 538
           V +Y KCG +  A  VF     R+V +WT ++   A NG   +AL   + M   G  P+ 
Sbjct: 99  VEMYGKCGSLQAAKSVFHITPRRNVFSWTIMVAAFAHNGHYMDALNLLEIMDLEGISPNS 158

Query: 539 ITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLD 598
           ITF+ LL A +     +  R     +    G         C+I++  +   L +A ++ +
Sbjct: 159 ITFIELLGAVAALSWLDRGRALHRRI-ACCGFLADIFVANCLINMYAKCRSLADACSVFE 217

Query: 599 QMVGEPDATVWKALLSACRVHG 620
            +        W AL++A  ++G
Sbjct: 218 SLTSR-SVIAWTALVAAYALNG 238


>gi|357115878|ref|XP_003559712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Brachypodium distachyon]
          Length = 650

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 234/580 (40%), Positives = 342/580 (58%), Gaps = 12/580 (2%)

Query: 240 SILTACAAVSARDFGAQVHGCILSSGF---EANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           S L   A+ ++   GAQ+H   +  GF     ++ + +A+++ YA C + D ARR+ +  
Sbjct: 73  SALFKAASSASPSMGAQLHAQAVVRGFLDDAGSIILPTAILNFYASCREPDLARRVFDAM 132

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNI----- 350
              N V+WN++I G+A+ G  +EAL LF  M  +  +  D +T+P++L+           
Sbjct: 133 ACTNAVTWNALIKGYAQAGRREEALELFLAMRRQSHVAPDRYTFPALLSGIGREQGGGCM 192

Query: 351 -DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
            +L  A  VH   +K+G     FV  +L+ MYA +G LD   +VF+ +   D + W+SLI
Sbjct: 193 QELGGA--VHGQAIKSGLNRDPFVGASLVSMYAARGALDEVKVVFDDVDTLDPVVWSSLI 250

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
           +        E AL  F  M    I P   V SS+ + C  +++LE G+QVHA  LKS   
Sbjct: 251 SAYVNCKEEEGALLTFYRMLCRDIKPRQFVYSSMFAVCGSMSMLEMGRQVHAHSLKSNTD 310

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
              ++ N+L+ +Y+ CGCI DA RVF+S    DV+++ ++I+   Q+G  KEA + Y QM
Sbjct: 311 KDAAMTNALLTMYSDCGCIRDALRVFNSNDIVDVVSYNSIILALGQHGHPKEATELYRQM 370

Query: 530 LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGK 589
              G  PD +T + LL A +HAGL       F SM  + GIKP   HYAC+ D+L RSG+
Sbjct: 371 NCAGLMPDDVTLLNLLSAFNHAGLVHEGLHIFNSMLDMEGIKPTYQHYACVADMLARSGQ 430

Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNM 649
           + EA   + +M  E +A +W+ +L AC  H D+  G + A  LFE+EP  A  Y+ L N+
Sbjct: 431 IGEAMKTIYEMPFEAEAPLWRIILGACSKHRDIRTGTKIAEMLFEMEPYEATNYILLGNI 490

Query: 650 YSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEI 709
           Y+  G+W +A +VR +M+ RGI ++   SW+E + + H F  +DR HP+  +IY  +D +
Sbjct: 491 YTRLGRWTEAEKVRNMMEKRGIDRDDAFSWIEISQRTHRFGVDDRSHPISREIYRNLDRL 550

Query: 710 MLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVC 769
           +  IK AGYVPD++FA HN++++ +E  L YH EKLA AFG L  P G  +RI KNLRVC
Sbjct: 551 IGSIKVAGYVPDISFAAHNIKKDRREESLHYHCEKLAFAFGDLATPSGDTLRIMKNLRVC 610

Query: 770 GDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           GDCH A KY S +  R IILRD++RFHHF  G CSCGDYW
Sbjct: 611 GDCHCAYKYFSLITGREIILRDNHRFHHFNKGACSCGDYW 650



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 185/405 (45%), Gaps = 35/405 (8%)

Query: 35  PASDLNRALVDFSNSGEIDEAGQLFEK------MSDRDGFTWNTMIAAYANSGRLRE-AK 87
           P   L  AL   ++S       QL  +      + D       T I  +  S R  + A+
Sbjct: 67  PTPRLFSALFKAASSASPSMGAQLHAQAVVRGFLDDAGSIILPTAILNFYASCREPDLAR 126

Query: 88  KLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGY-RPSQYTLDNVLRLCSLK 146
           ++F+     N  TW++LI GY+  G   EA ELF  M+ + +  P +YT   +L     +
Sbjct: 127 RVFDAMACTNAVTWNALIKGYAQAGRREEALELFLAMRRQSHVAPDRYTFPALLSGIGRE 186

Query: 147 ---GLLQR-GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVA 202
              G +Q  G   HG AIK+  + + FV   LV MYA    + E + +F    D  + V 
Sbjct: 187 QGGGCMQELGGAVHGQAIKSGLNRDPFVGASLVSMYAARGALDEVKVVFDDV-DTLDPVV 245

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
           W+++I+ Y        A+  F  M    ++  QF + S+   C ++S  + G QVH   L
Sbjct: 246 WSSLISAYVNCKEEEGALLTFYRMLCRDIKPRQFVYSSMFAVCGSMSMLEMGRQVHAHSL 305

Query: 263 SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
            S  + +  + +AL+ MY+ CG +  A R+   ++I + VS+NS+I+   + G  KEA  
Sbjct: 306 KSNTDKDAAMTNALLTMYSDCGCIRDALRVFNSNDIVDVVSYNSIILALGQHGHPKEATE 365

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI-----------VKTGFEGYK 371
           L+++M+   +  DD T  ++L+ F      N+A  VH  +           +K  ++ Y 
Sbjct: 366 LYRQMNCAGLMPDDVTLLNLLSAF------NHAGLVHEGLHIFNSMLDMEGIKPTYQHYA 419

Query: 372 FVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYH 415
            V     DM A+ G +  A   ++ +  + +   W  ++  C+ H
Sbjct: 420 CV----ADMLARSGQIGEAMKTIYEMPFEAEAPLWRIILGACSKH 460


>gi|5050911|emb|CAB45019.1| PCMP-H2 [Arabidopsis thaliana]
          Length = 287

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 207/287 (72%), Positives = 239/287 (83%)

Query: 523 LQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMID 582
           LQ YD M+  G  PDYITF+GLLFACSHAGL E+A+ YF+SM  VYGI PGP+HYACMID
Sbjct: 1   LQSYDLMIGSGITPDYITFIGLLFACSHAGLLEDAQRYFDSMRTVYGITPGPEHYACMID 60

Query: 583 LLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           L GRSG  ++ + LL QM  EPDATVWKA+L+A R HG++E GERAA  L ELEP NA+P
Sbjct: 61  LFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVP 120

Query: 643 YVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDI 702
           YVQLSNMYS AG+ ++AA VR+LMKSR I KEPGCSWVE   +VH F+SEDR HP   +I
Sbjct: 121 YVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEI 180

Query: 703 YSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRI 762
           YSK+DE+MLLIKEAGY  DM+FALH++++EGKE+GLAYHSEKLAVAFGLL +P GAPIRI
Sbjct: 181 YSKVDEMMLLIKEAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRI 240

Query: 763 FKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            KNLRVCGDCH+AMKYIS VYLRHIILRDSN FHHF+ G CSCGDYW
Sbjct: 241 IKNLRVCGDCHSAMKYISRVYLRHIILRDSNCFHHFRDGKCSCGDYW 287


>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 227/572 (39%), Positives = 342/572 (59%), Gaps = 1/572 (0%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           + S+L +C    A + G Q+H  I   G   N  + + L+++Y  C  L +A  L +   
Sbjct: 4   YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
             N   WN MI G+A  G ++ A+SL+ +M    +  D FT+P VL   ++   +   K 
Sbjct: 64  KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           +H  ++++G E   FV  ALIDMYAK G ++ A  VF+ + ++DV+ W S++   + +G 
Sbjct: 124 IHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQ 183

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
            +E+L     M  +G+ P        ++A A+  +L  G+++H    + G  S+  V  +
Sbjct: 184 PDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTA 243

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
           L+ +YAK G +N A  +F+ +  + V++W A+I G A +G   EAL  + +M  +   PD
Sbjct: 244 LMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGK-VLPD 302

Query: 538 YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALL 597
           +ITFVG+L ACSH GL    + +F SM   + I P   HY CMIDLLG  G+L EA  L+
Sbjct: 303 HITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLI 362

Query: 598 DQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWE 657
            +M  EPDA VW ALL +C++HG++E+GE A   L ELEP +   YV LSNMY+ AGKW+
Sbjct: 363 MEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWD 422

Query: 658 DAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAG 717
             AR+R LM ++G++K   CSW+E  ++VH F+SED  HP    IY+++     L+KEAG
Sbjct: 423 GVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEAG 482

Query: 718 YVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMK 777
           Y P +    H+VE++ K   ++ HSE+LA+AFGL++   G  + I KNLR+C DCH A+K
Sbjct: 483 YAPQVGSVFHDVEDDEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDCHVAIK 542

Query: 778 YISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +IS +  R I +RD NR+HHFK G CSCGD+W
Sbjct: 543 FISKITEREITIRDVNRYHHFKDGVCSCGDFW 574



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 122/382 (31%), Positives = 206/382 (53%), Gaps = 4/382 (1%)

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           ++L+ C ++  ++ G+Q H    +     N  + T LV++Y  C  +  A  LF      
Sbjct: 6   SLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISK- 64

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           +N   W  MI GY+ NG    AI  +  MR  G+  ++FTFP +L AC+A+SA + G ++
Sbjct: 65  RNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKI 124

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           H  ++ SG E++V+V +ALIDMYAKCG ++SAR++ +  +  + V WNSM+  +++ G  
Sbjct: 125 HKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQP 184

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
            E+L+L + M    +K  + T+   +   A N  L   K +H    + GFE    V  AL
Sbjct: 185 DESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTAL 244

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           +DMYAK G+++ A  +F L+++K V+SW ++ITG A HG   EAL  F +M+   + PDH
Sbjct: 245 MDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMK-GKVLPDH 303

Query: 438 VVVSSILSACAELTVLEFGQ-QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFD 496
           +    +L+AC+   +L  G+    ++        ++     ++ +   CG + +A ++  
Sbjct: 304 ITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIM 363

Query: 497 SMHTR-DVITWTALIMGCAQNG 517
            M    D   W AL+  C  +G
Sbjct: 364 EMRVEPDAGVWGALLHSCKIHG 385



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 188/374 (50%), Gaps = 11/374 (2%)

Query: 54  EAGQLFEKMSDRDGFTWNTMIAA-----YANSGRLREAKKLFNETPFKNFFTWSSLIYGY 108
           E G+       + G ++N ++A      Y     L  A  LF+    +N F W+ +I GY
Sbjct: 18  EPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIRGY 77

Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA 168
           +  G    A  L++QM+  G  P ++T   VL+ CS    ++ G++ H   I++  + + 
Sbjct: 78  AWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDV 137

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
           FV   L+DMYAKC C+  A  +F    D ++ V W +M+  YSQNG   +++   R M  
Sbjct: 138 FVGAALIDMYAKCGCVESARQVFDKI-DERDVVCWNSMLATYSQNGQPDESLALCRVMAF 196

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
            G++  + TF   + A A       G ++HG     GFE+N  V++AL+DMYAK G ++ 
Sbjct: 197 NGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNV 256

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
           AR L E  E    VSWN+MI G+A  G   EAL LFK+M  + +  D  T+  VL   + 
Sbjct: 257 ARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGK-VLPDHITFVGVLAACSH 315

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNN--ALIDMYAKQGNLDCAF-MVFNLMQDKDVISW 405
              LN  K +H   + + F  +  V +   +ID+    G L+ A+ ++  +  + D   W
Sbjct: 316 GGLLNEGK-MHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVW 374

Query: 406 TSLITGCAYHGSYE 419
            +L+  C  HG+ E
Sbjct: 375 GALLHSCKIHGNVE 388



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 135/271 (49%), Gaps = 38/271 (14%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           AL+D ++  G ++ A Q+F+K+ +RD   WN+M+A Y+ +G+                  
Sbjct: 142 ALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPD---------------- 185

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
                          E+  L   M   G +P++ T    +   +  GLL +G++ HGY+ 
Sbjct: 186 ---------------ESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSW 230

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAI 220
           +  F+ N  V T L+DMYAK   +  A  LF++  + K  V+W  MITGY+ +G+  +A+
Sbjct: 231 RHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEE-KRVVSWNAMITGYAMHGHANEAL 289

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ--SALID 278
           + F++M+ + V  +  TF  +L AC+     + G ++H   + S F     VQ  + +ID
Sbjct: 290 DLFKEMKGK-VLPDHITFVGVLAACSHGGLLNEG-KMHFRSMISDFNIWPTVQHYTCMID 347

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVS-WNSMI 308
           +   CG L+ A +L+    ++ +   W +++
Sbjct: 348 LLGHCGRLEEAYKLIMEMRVEPDAGVWGALL 378



 Score = 44.3 bits (103), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 65/165 (39%), Gaps = 39/165 (23%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           +  AL+D ++ SG ++ A  LFE + ++   +WN MI  YA  G   EA  LF E   K 
Sbjct: 240 VKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGKV 299

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
                                            P   T   VL  CS  GLL  G + H 
Sbjct: 300 L--------------------------------PDHITFVGVLAACSHGGLLNEG-KMHF 326

Query: 158 YAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLF---KMFPDG 197
            ++ + F++   V   T ++D+   C  + EA  L    ++ PD 
Sbjct: 327 RSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDA 371


>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 663

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 246/618 (39%), Positives = 356/618 (57%), Gaps = 42/618 (6%)

Query: 233 SNQFTFPSILTACAAVSARDFGAQV---HGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
           ++ F+ PS  T    +  R    Q+   H  +++ G   N  +   LI  Y  C +L  A
Sbjct: 47  TSSFSLPSHSTFVQLLKKRPSLTQIKQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFA 106

Query: 290 RRLL-EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM--HARDIKIDDFTYPSVLNCF 346
           R +  ++  +   + WN MI  +++    +E+L LF +M  H R    D +T+  V    
Sbjct: 107 RIVFDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTAC 166

Query: 347 ASNIDLNN-AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
           + +  L    ++VH ++VK G+E   FV N+L++MY+    +  A  VF+ M  +DVI+W
Sbjct: 167 SRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITW 226

Query: 406 TSLITGCAYHGS-------------------------------YEEALKYFSDMRISG-I 433
           TS++ G A  G                                Y EAL+ F+DM     +
Sbjct: 227 TSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEV 286

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
            P+  V+ SILSACA L  L+ G+ +H    K+    S ++  +L+ +YAKCG I+ A R
Sbjct: 287 KPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARR 346

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGL 553
           VFD +H RD++TWT++I G + +G G E L  + +MLA G KPD IT +G+L  CSH+GL
Sbjct: 347 VFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGL 406

Query: 554 AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
            E     F  M  ++GI P  +HY C+IDLLGR+G+L  A   +  M  EPD   W+ALL
Sbjct: 407 VEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALL 466

Query: 614 SACRVHGDLELGERAANNLFELEP-MNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIR 672
           SACR+HGD++LGER  N++ EL P  +   YV LSN+Y++ G+WE   +VRK M  RG  
Sbjct: 467 SACRIHGDVDLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQRGSE 526

Query: 673 KEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIK-EAGYVPDMNFALHNVEE 731
             PGCSW+E +  VH F++ D+ HP  ++I  K++E++  I  E GYVP     L ++ E
Sbjct: 527 GCPGCSWIEIDGVVHEFLAADKLHPRISEINKKLNEVLRRISIEGGYVPSTKQVLFDLNE 586

Query: 732 EGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRD 791
           E KE  +++HSEKLAVAFGLL+  +G  IRI KNLR C DCH+AMK IS V+ R I++RD
Sbjct: 587 EDKEQAVSWHSEKLAVAFGLLSTQEGT-IRITKNLRTCEDCHSAMKTISLVFNREIVVRD 645

Query: 792 SNRFHHFKAGNCSCGDYW 809
            +RFH F+ GNCSC DYW
Sbjct: 646 RSRFHTFRYGNCSCTDYW 663



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 206/463 (44%), Gaps = 56/463 (12%)

Query: 98  FFTWSSLIYGYSNYGLDI------EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQR 151
           F+  S L+Y  SN    I       +F L          PS  T   +L+    +  L +
Sbjct: 24  FYVQSPLVYISSNTSSAIWEPSGTSSFSL----------PSHSTFVQLLKK---RPSLTQ 70

Query: 152 GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYS 211
            +Q H   +      N  ++  L+  Y  C+ +  A  +F  FP     + W  MI  YS
Sbjct: 71  IKQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLMIQAYS 130

Query: 212 QNGYGFKAIECFRDMRVEG--VESNQFTFPSILTACAA-VSARDFGAQVHGCILSSGFEA 268
           +     +++  F  M   G    ++++TF  + TAC+   + R +G  VHG ++  G+E+
Sbjct: 131 KTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYES 190

Query: 269 NVYVQSALIDM-------------------------------YAKCGDLDSARRLLEYSE 297
           +++V ++L++M                               YA  G+L  AR L +   
Sbjct: 191 DIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYAMRGELVRARELFDMMP 250

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNIDLNNAK 356
             N+VSW  M+ G+    F+ EAL  F  M   D +K ++    S+L+  A    L+  K
Sbjct: 251 GRNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGK 310

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H  I K        ++ ALIDMYAK G +DCA  VF+ +  +D+++WTS+I+G + HG
Sbjct: 311 WIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHG 370

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV-HAVFLKSGGCSSLSVD 475
              E L  FS+M   G  PD + +  +L+ C+   ++E G  + H +    G    L   
Sbjct: 371 LGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIFHDMIPLWGIVPKLEHY 430

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNG 517
             L+ +  + G +  A     SM    DV+ W AL+  C  +G
Sbjct: 431 GCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSACRIHG 473



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 184/402 (45%), Gaps = 43/402 (10%)

Query: 73  MIAAYANSGRLREAKKLFNETP-FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRP 131
           +I +Y     L  A+ +F++ P       W+ +I  YS      E+  LF QM   G RP
Sbjct: 93  LIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHG-RP 151

Query: 132 S---QYTLDNVLRLCSLKGLLQ-RGEQFHGYAIKTCFDLNAFVVTGLVDMYA------KC 181
           +   +YT   V   CS    L+  GE  HG  +K  ++ + FV   LV+MY+        
Sbjct: 152 TSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDA 211

Query: 182 KCIFE-------------------------AEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
           K +F+                         A  LF M P G+N V+W  M+ GY  + + 
Sbjct: 212 KRVFDEMPQRDVITWTSVVKGYAMRGELVRARELFDMMP-GRNDVSWAVMVAGYVGHRFY 270

Query: 217 FKAIECFRDMRV-EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSA 275
            +A++CF DM   + V+ N+    SIL+ACA + A D G  +H  I  +    +  + +A
Sbjct: 271 NEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTA 330

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           LIDMYAKCG +D ARR+ +     + ++W SMI G +  G   E L  F +M A   K D
Sbjct: 331 LIDMYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPD 390

Query: 336 DFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVF 394
           D T   VLN C  S +        H +I   G          LID+  + G L+ AF   
Sbjct: 391 DITLLGVLNGCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAI 450

Query: 395 NLM-QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
             M  + DV++W +L++ C  HG  +   +  +   I+ +CP
Sbjct: 451 KSMPMEPDVVAWRALLSACRIHGDVDLGERIIN--HIAELCP 490



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 135/261 (51%), Gaps = 10/261 (3%)

Query: 54  EAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGL 113
           +A ++F++M  RD  TW +++  YA  G L  A++LF+  P +N  +W+ ++ GY  +  
Sbjct: 210 DAKRVFDEMPQRDVITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRF 269

Query: 114 DIEAFELFWQMQL-EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVT 172
             EA + F  M   +  +P++  L ++L  C+  G L +G+  H Y  K    L++ + T
Sbjct: 270 YNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNIST 329

Query: 173 GLVDMYAKCKCIFEAEYLFKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
            L+DMYAKC  I  A  +F    DG   ++ + WT+MI+G S +G G + +  F +M  E
Sbjct: 330 ALIDMYAKCGRIDCARRVF----DGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAE 385

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQV-HGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
           G + +  T   +L  C+     + G  + H  I   G    +     LID+  + G L+S
Sbjct: 386 GFKPDDITLLGVLNGCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLES 445

Query: 289 ARRLLEYSEIDNE-VSWNSMI 308
           A   ++   ++ + V+W +++
Sbjct: 446 AFEAIKSMPMEPDVVAWRALL 466


>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 690

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 228/594 (38%), Positives = 362/594 (60%), Gaps = 3/594 (0%)

Query: 218 KAIECFRDMRVE--GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSA 275
           +A+E F  + +E  G +    T+ ++++AC  + +     +V   +++SGFE ++YV + 
Sbjct: 98  EAMELFEILELEHDGFDVGGSTYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNR 157

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           ++ ++ KCG +  AR+L +     +  SW +MI GF   G   EA  LF  M        
Sbjct: 158 VLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGR 217

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
             T+ +++   A    +   + +HS  +K G     FV+ ALIDMY+K G+++ A  VF+
Sbjct: 218 SRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFD 277

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
            M +K  + W S+I   A HG  EEAL ++ +MR SG   DH  +S ++  CA L  LE+
Sbjct: 278 QMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEY 337

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
            +Q HA  ++ G  + +  + +LV  Y+K G + DA  VF+ M  ++VI+W ALI G   
Sbjct: 338 AKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGN 397

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
           +G+G+EA++ ++QML  G  P+++TF+ +L ACS++GL+E     F SM + + +KP   
Sbjct: 398 HGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAM 457

Query: 576 HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
           HYACM++LLGR G L EA  L+     +P   +W  LL+ACR+H +LELG+ AA NL+ +
Sbjct: 458 HYACMVELLGREGLLDEAYELIRSAPFKPTTNMWATLLTACRMHENLELGKLAAENLYGM 517

Query: 636 EPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG 695
           EP     Y+ L N+Y+++GK ++AA V + +K +G+R  P C+W+E   Q + F+  D+ 
Sbjct: 518 EPEKLCNYIVLLNLYNSSGKLKEAAGVLQTLKRKGLRMLPACTWIEVKKQSYAFLCGDKS 577

Query: 696 HPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLP 755
           H    +IY K++ +M+ I   GYV +    L +V+EE + I L YHSEKLA+AFGL+  P
Sbjct: 578 HSQTKEIYEKVNNMMVEISRHGYVEENKALLPDVDEEEQRI-LKYHSEKLAIAFGLINTP 636

Query: 756 QGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
              P++I +  RVCGDCH+A+K+I+ V  R I++RD++RFHHF+ G+CSCGDYW
Sbjct: 637 HWTPLQITQGHRVCGDCHSAIKFIAMVTGREIVVRDASRFHHFRDGSCSCGDYW 690



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 145/494 (29%), Positives = 236/494 (47%), Gaps = 52/494 (10%)

Query: 116 EAFELFWQMQLE--GYRPSQYTLDNVLRLC----SLKGLLQRGEQFHGYAIKTCFDLNAF 169
           EA ELF  ++LE  G+     T D ++  C    S++G+    ++   Y + + F+ + +
Sbjct: 98  EAMELFEILELEHDGFDVGGSTYDALVSACVGLRSIRGV----KRVFNYMVNSGFEPDLY 153

Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
           V+  ++ ++ KC  + +A  LF   P+ K+  +W TMI G+  +G   +A   F  M  E
Sbjct: 154 VMNRVLFVHVKCGLMLDARKLFDEMPE-KDMASWMTMIGGFVDSGNFSEAFGLFLCMWEE 212

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
             +    TF +++ A A +     G Q+H C L  G   + +V  ALIDMY+KCG ++ A
Sbjct: 213 FNDGRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDA 272

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
             + +       V WNS+I  +A  G+ +EALS + +M     KID FT   V+   A  
Sbjct: 273 HCVFDQMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARL 332

Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
             L  AK  H+ +V+ G++     N AL+D Y+K G ++ A+ VFN M+ K+VISW +LI
Sbjct: 333 ASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALI 392

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
            G   HG  EEA++ F  M   G+ P+HV   ++LSAC+   + E G +           
Sbjct: 393 AGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGWE----------- 441

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEAL--QFYD 527
                                   +F SM     +   A+   C     G+E L  + Y+
Sbjct: 442 ------------------------IFYSMSRDHKVKPRAMHYACMVELLGREGLLDEAYE 477

Query: 528 QMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD-HYACMIDLLGR 586
            + +   KP    +  LL AC    + EN      + + +YG++P    +Y  +++L   
Sbjct: 478 LIRSAPFKPTTNMWATLLTACR---MHENLELGKLAAENLYGMEPEKLCNYIVLLNLYNS 534

Query: 587 SGKLIEAKALLDQM 600
           SGKL EA  +L  +
Sbjct: 535 SGKLKEAAGVLQTL 548



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 181/356 (50%), Gaps = 3/356 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +  N ++  +   G + +A+KLF+E P K+  +W ++I G+ + G   EAF LF  M 
Sbjct: 151 DLYVMNRVLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMW 210

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            E       T   ++R  +  GL+Q G Q H  A+K     + FV   L+DMY+KC  I 
Sbjct: 211 EEFNDGRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIE 270

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A  +F   P+ K  V W ++I  Y+ +GY  +A+  + +MR  G + + FT   ++  C
Sbjct: 271 DAHCVFDQMPE-KTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRIC 329

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A +++ ++  Q H  ++  G++ ++   +AL+D Y+K G ++ A  +       N +SWN
Sbjct: 330 ARLASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWN 389

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVK 364
           ++I G+   G  +EA+ +F++M    +  +  T+ +VL+ C  S +     +  +S+   
Sbjct: 390 ALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRD 449

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYE 419
              +        ++++  ++G LD A+ +      K   + W +L+T C  H + E
Sbjct: 450 HKVKPRAMHYACMVELLGREGLLDEAYELIRSAPFKPTTNMWATLLTACRMHENLE 505



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 1/153 (0%)

Query: 58  LFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEA 117
           L  +  D D      ++  Y+  GR+ +A  +FN    KN  +W++LI GY N+G   EA
Sbjct: 345 LVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEA 404

Query: 118 FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG-EQFHGYAIKTCFDLNAFVVTGLVD 176
            E+F QM  EG  P+  T   VL  CS  GL +RG E F+  +        A     +V+
Sbjct: 405 VEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMVE 464

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
           +  +   + EA  L +  P       W T++T 
Sbjct: 465 LLGREGLLDEAYELIRSAPFKPTTNMWATLLTA 497


>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
          Length = 787

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 241/645 (37%), Positives = 376/645 (58%), Gaps = 7/645 (1%)

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
           + FV + L  +Y     +  A  +F   P   + V W T++ G S    G +A+E F  M
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPS-PDTVLWNTLLAGLS----GSEAVESFARM 202

Query: 227 RVEG-VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
             +G V  +  T  S+L A A V+    G  VH      G   + +V + LI +Y+KCGD
Sbjct: 203 VCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGD 262

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           ++SAR L +  E  + V++N++I G++  G    +++LF ++    +  +  T  +++  
Sbjct: 263 VESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPV 322

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
            +       A+ +H  ++K+GF     V+ A+  ++ +  +++ A   F+ M +K + SW
Sbjct: 323 HSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESW 382

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
            ++I+G A +G  E A+  F  M    + P+ + +SS LSACA+L  L  G+ +H +  +
Sbjct: 383 NAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITE 442

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
                ++ V  +L+ +YAKCG I++A R+F++M  ++V++W A+I G   +G+G EAL+ 
Sbjct: 443 EDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKL 502

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
           Y  ML     P   TF+ +L+ACSH GL E     F SM   Y I PG +H  CM+DLLG
Sbjct: 503 YKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLG 562

Query: 586 RSGKLIEAKALLDQMVGEP-DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYV 644
           R+G+L EA  L+ +         VW ALL AC VH D +L + A+  LFEL+P N+  YV
Sbjct: 563 RAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYV 622

Query: 645 QLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYS 704
            LSN++++  ++ +AA VR+  KSR + K PG + +E  ++ H+F++ DR HP    IYS
Sbjct: 623 LLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEAIYS 682

Query: 705 KIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFK 764
            ++++   + EAGY P+   AL++VEEE KE  +  HSEKLA+AFGLL+   G  IRI K
Sbjct: 683 YLEKLTAKMIEAGYRPETEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIK 742

Query: 765 NLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           NLRVC DCH A K+IS V  R I++RD++RFHHF+ G CSCGDYW
Sbjct: 743 NLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 125/396 (31%), Positives = 206/396 (52%), Gaps = 8/396 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  + +   Y    R+  A+K+F+  P  +   W++L+ G S      EA E F +M 
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGS----EAVESFARMV 203

Query: 126 LEG-YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
            +G  RP   TL +VL   +    +  G   H +A K     +  V+TGL+ +Y+KC  +
Sbjct: 204 CDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDV 263

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
             A  LF M  +  + VA+  +I+GYS NG    ++  F ++   G+  N  T  +++  
Sbjct: 264 ESARCLFDMM-EKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPV 322

Query: 245 CAAVSARDFGAQ-VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
            +     D  AQ +HG +L SGF AN  V +A+  ++ +  D++SAR+  +        S
Sbjct: 323 HSPF-GHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMES 381

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN+MI G+A+ G  + A++LF++M   +++ +  T  S L+  A    L+  K +H +I 
Sbjct: 382 WNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIIT 441

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           +   E   +V  ALIDMYAK G++  A  +FN M +K+V+SW ++I G   HG   EALK
Sbjct: 442 EEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALK 501

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
            + DM  + + P      S+L AC+   ++E G +V
Sbjct: 502 LYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKV 537



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 166/357 (46%), Gaps = 26/357 (7%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +I+ Y+  G +  A+ LF+     +   +++LI GYS  G+   +  LF ++   G  P+
Sbjct: 253 LISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPN 312

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
             TL  ++ + S  G     +  HG+ +K+ F  N+ V T +  ++ +   +  A   F 
Sbjct: 313 SSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFD 372

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
             P+ K   +W  MI+GY+QNG    A+  F  M    V  N  T  S L+ACA + A  
Sbjct: 373 TMPE-KTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALS 431

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G  +H  I     E NVYV +ALIDMYAKCG +  ARR+    +  N VSWN+MI G+ 
Sbjct: 432 LGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYG 491

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
             G   EAL L+K M    +     T+ SVL   +           H  +V+ G++ ++ 
Sbjct: 492 LHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACS-----------HGGLVEEGWKVFRS 540

Query: 373 VNN------------ALIDMYAKQGNLDCAFMVFNLMQDKDVIS--WTSLITGCAYH 415
           + +             ++D+  + G L  AF + +      V    W +L+  C  H
Sbjct: 541 MTDDYAINPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVH 597



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 126/266 (47%), Gaps = 9/266 (3%)

Query: 35  PASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLR-----EAKKL 89
           P S    AL+   +    D   Q       + GFT N+ ++    +   R      A+K 
Sbjct: 311 PNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKA 370

Query: 90  FNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLL 149
           F+  P K   +W+++I GY+  GL   A  LF QM     RP+  T+ + L  C+  G L
Sbjct: 371 FDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGAL 430

Query: 150 QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
             G+  H    +   + N +V+T L+DMYAKC  I EA  +F    D KN V+W  MI G
Sbjct: 431 SLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTM-DNKNVVSWNAMIAG 489

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
           Y  +G G +A++ ++DM    +     TF S+L AC+     + G +V    ++  +  N
Sbjct: 490 YGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRS-MTDDYAIN 548

Query: 270 VYVQ--SALIDMYAKCGDLDSARRLL 293
             ++  + ++D+  + G L  A  L+
Sbjct: 549 PGIEHCTCMVDLLGRAGQLKEAFELI 574


>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
 gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 595

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 211/520 (40%), Positives = 333/520 (64%), Gaps = 5/520 (0%)

Query: 295 YSEIDNEVS---WNSMIVGFARQGFHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNI 350
           +S+I+  ++   WN++I G+A  G    A SL+++M     ++ D  TYP ++    +  
Sbjct: 76  FSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMA 135

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           D+   +++HS+++++GF    +V N+L+ +YA  G++  A+ VF+ M +KD+++W S+I 
Sbjct: 136 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 195

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
           G A +G  EEAL  +++M   GI PD   + S+LSACA++  L  G++VH   +K G   
Sbjct: 196 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 255

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
           +L   N L+ +YA+CG + +A  +FD M  ++ ++WT+LI+G A NG GKEA++ +  M 
Sbjct: 256 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 315

Query: 531 A-RGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGK 589
           +  G  P  ITFVG+L+ACSH G+ +    YF  M + Y I+P  +H+ CM+DLL R+G+
Sbjct: 316 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 375

Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNM 649
           + +A   +  M  +P+  +W+ LL AC VHGD +L E A   + +LEP ++  YV LSNM
Sbjct: 376 VKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNM 435

Query: 650 YSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEI 709
           Y++  +W D  ++RK M   G++K PG S VE  ++VH F+  D+ HP    IY+K+ E+
Sbjct: 436 YASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEM 495

Query: 710 MLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVC 769
              ++  GYVP ++    +VEEE KE  + YHSEK+A+AF L++ P+ +PI + KNLRVC
Sbjct: 496 TGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVC 555

Query: 770 GDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            DCH A+K +S VY R I++RD +RFHHFK G+CSC DYW
Sbjct: 556 ADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 192/368 (52%), Gaps = 30/368 (8%)

Query: 86  AKKLFN--ETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGY-RPSQYTLDNVLRL 142
           A K+F+  E P  N F W++LI GY+  G  I AF L+ +M++ G   P  +T   +++ 
Sbjct: 72  AHKVFSKIEKPI-NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKA 130

Query: 143 CSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVA 202
            +    ++ GE  H   I++ F    +V   L+ +YA C  +  A  +F   P+ K+ VA
Sbjct: 131 VTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE-KDLVA 189

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
           W ++I G+++NG   +A+  + +M  +G++ + FT  S+L+ACA + A   G +VH  ++
Sbjct: 190 WNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 249

Query: 263 SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
             G   N++  + L+D+YA+CG ++ A+ L +     N VSW S+IVG A  GF KEA+ 
Sbjct: 250 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIE 309

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA------ 376
           LFK M + +          +L C  + + +  A S H  +VK GFE ++ +         
Sbjct: 310 LFKYMESTE---------GLLPCEITFVGILYACS-HCGMVKEGFEYFRRMREEYKIEPR 359

Query: 377 ------LIDMYAKQGNLDCAFMVFNLM-QDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
                 ++D+ A+ G +  A+     M    +V+ W +L+  C  HG  +  L  F+ ++
Sbjct: 360 IEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG--DSDLAEFARIQ 417

Query: 430 ISGICPDH 437
           I  + P+H
Sbjct: 418 ILQLEPNH 425



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 108/343 (31%), Positives = 182/343 (53%), Gaps = 20/343 (5%)

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTAC 245
           A  +F       N   W T+I GY++ G    A   +R+MRV G VE +  T+P ++ A 
Sbjct: 72  AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
             ++    G  +H  ++ SGF + +YVQ++L+ +YA CGD+ SA ++ +     + V+WN
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           S+I GFA  G  +EAL+L+ +M+++ IK D FT  S+L+  A    L   K VH  ++K 
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G       +N L+D+YA+ G ++ A  +F+ M DK+ +SWTSLI G A +G  +EA++ F
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311

Query: 426 SDMR-ISGICPDHVVVSSILSACAELTVL----EFGQQVHAVF-----LKSGGCSSLSVD 475
             M    G+ P  +    IL AC+   ++    E+ +++   +     ++  GC      
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGC------ 365

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNG 517
             +V + A+ G +  A     SM  + +V+ W  L+  C  +G
Sbjct: 366 --MVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 132/261 (50%), Gaps = 9/261 (3%)

Query: 56  GQLFEKMSDRDGF-----TWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSN 110
           G+    +  R GF       N+++  YAN G +  A K+F++ P K+   W+S+I G++ 
Sbjct: 140 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 199

Query: 111 YGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV 170
            G   EA  L+ +M  +G +P  +T+ ++L  C+  G L  G++ H Y IK     N   
Sbjct: 200 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 259

Query: 171 VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR-VE 229
              L+D+YA+C  + EA+ LF    D KN V+WT++I G + NG+G +AIE F+ M   E
Sbjct: 260 SNVLLDLYARCGRVEEAKTLFDEMVD-KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 318

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDS 288
           G+   + TF  IL AC+       G +    +      E  +     ++D+ A+ G +  
Sbjct: 319 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKK 378

Query: 289 ARRLLEYSEID-NEVSWNSMI 308
           A   ++   +  N V W +++
Sbjct: 379 AYEYIKSMPMQPNVVIWRTLL 399


>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 247/776 (31%), Positives = 403/776 (51%), Gaps = 75/776 (9%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +I  Y     +  A ++F+ETP +  F W++++          +A EL  +MQ    + +
Sbjct: 172 LINLYEKCLGIDRANQVFDETPLQEDFLWNTIVMANLRSERWEDALELSRRMQSASAKAT 231

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
             T+  +L+ C     L  G+Q HGY I+     N  +   +V MY++   +  A  +F 
Sbjct: 232 DGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFD 291

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT--------- 243
              D  N  +W ++I+ Y+ NG    A + FR+M    ++ +  T+ S+L+         
Sbjct: 292 STED-HNLASWNSIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYE 350

Query: 244 -----------------ACAAVSAR---------DFGAQVHGCILSSGFEANVYVQSALI 277
                            +C+  SA          + G ++HG I+ S  E +VYV ++L+
Sbjct: 351 NVLTNIRSLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLV 410

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
           DMY K   L+ A  +  +++  N  +WNS+I G+  +G    A  L  +M    IK D  
Sbjct: 411 DMYIKNDCLEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLV 470

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           T+                                   N+L+  Y+  G  + A  V N +
Sbjct: 471 TW-----------------------------------NSLVSGYSMSGCSEEALAVINRI 495

Query: 398 QD----KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           +      +V+SWT++I+GC  + +Y +AL++FS M+   + P+   +S++L ACA  ++L
Sbjct: 496 KSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRACAGPSLL 555

Query: 454 EFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC 513
           + G+++H   +K G    + +  +L+ +Y+K G +  A+ VF ++  + +  W  ++MG 
Sbjct: 556 KKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGKLKVAHEVFRNIKEKTLPCWNCMMMGY 615

Query: 514 AQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPG 573
           A  G G+E    +D M   G +PD ITF  LL  C ++GL  +   YF+SM   Y I P 
Sbjct: 616 AIYGHGEEVFTLFDNMCKTGIRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYSINPT 675

Query: 574 PDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLF 633
            +HY+CM+DLLG++G L EA   +  M  + DA++W A+L+ACR+H D+++ E AA NLF
Sbjct: 676 IEHYSCMVDLLGKAGFLDEALDFIHAMPQKADASIWGAVLAACRLHKDIKIAEIAARNLF 735

Query: 634 ELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISED 693
            LEP N+  YV + N+YST  +W D  R+++ M + G++     SW++    +H+F +E 
Sbjct: 736 RLEPYNSANYVLMMNIYSTFERWGDVERLKESMTAMGVKIPNVWSWIQVRQTIHVFSTEG 795

Query: 694 RGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLT 753
           + HP   +IY  + +++  IK+ GYVPD N    N+++  KE  L  H+EKLA+ +GL+ 
Sbjct: 796 KSHPEEGEIYFDLYQLISEIKKLGYVPDTNCVHQNIDDSEKEKVLLSHTEKLAMTYGLMK 855

Query: 754 LPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +  G PIR+ KN R+C DCHTA KYIS    R I LRD  RFHHF  G CSC D W
Sbjct: 856 IKGGTPIRVVKNTRICQDCHTAAKYISLARNREIFLRDGGRFHHFMNGECSCNDRW 911



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 153/596 (25%), Positives = 262/596 (43%), Gaps = 86/596 (14%)

Query: 72  TMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI-EAFELFWQMQLEGYR 130
           +M+  Y   G    A K+F     +N+  W+S +  ++++G D  E  E+F ++  +G +
Sbjct: 69  SMMRNYLEFGDFESATKVFFVGFARNYLLWNSFLEEFASFGGDSHEILEVFKELHDKGVK 128

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
                L  VL++C     L  G + H   +K  F ++  +   L+++Y KC  I  A  +
Sbjct: 129 FDSKALTVVLKICLALMELWLGMEVHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQV 188

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P  ++ + W T++    ++     A+E  R M+    ++   T   +L AC  + A
Sbjct: 189 FDETPLQEDFL-WNTIVMANLRSERWEDALELSRRMQSASAKATDGTIVKLLQACGKLRA 247

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            + G Q+HG ++  G  +N  + ++++ MY++   L+ AR + + +E  N  SWNS+I  
Sbjct: 248 LNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISS 307

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVL--------------------------- 343
           +A  G    A  LF++M +  IK D  T+ S+L                           
Sbjct: 308 YAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPD 367

Query: 344 -----NCFASNIDL---NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
                +   + I+L   N  K +H  I+++  E   +V  +L+DMY K   L+ A +VF+
Sbjct: 368 SCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFH 427

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
             ++K++ +W SLI+G  Y G ++ A K    M+  GI  D V                 
Sbjct: 428 HTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTW--------------- 472

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA----NRVFDSMHTRDVITWTALIM 511
                               NSLV  Y+  GC  +A    NR+     T +V++WTA+I 
Sbjct: 473 --------------------NSLVSGYSMSGCSEEALAVINRIKSLGLTPNVVSWTAMIS 512

Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIK 571
           GC QN    +ALQF+ QM     KP+  T   LL AC+   L +            + +K
Sbjct: 513 GCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRACAGPSLLKKGEEI-----HCFSMK 567

Query: 572 PG--PDHY--ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
            G   D Y    +ID+  + GKL  A  +  + + E     W  ++    ++G  E
Sbjct: 568 HGFVDDIYIATALIDMYSKGGKLKVAHEVF-RNIKEKTLPCWNCMMMGYAIYGHGE 622



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 123/488 (25%), Positives = 223/488 (45%), Gaps = 40/488 (8%)

Query: 33  VKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE 92
           V   S  N  +  +S +  ++ A  +F+   D +  +WN++I++YA +G L  A  LF E
Sbjct: 264 VSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYAVNGCLNGAWDLFRE 323

Query: 93  TPFK----NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL 148
                   +  TW+SL+ G+   G           +Q  G++P   ++ + L+     G 
Sbjct: 324 MESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSITSALQAVIELGY 383

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
              G++ HGY +++  + + +V T LVDMY K  C+ +AE +F      KN  AW ++I+
Sbjct: 384 FNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFH-HTKNKNICAWNSLIS 442

Query: 209 GYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEA 268
           GY+  G    A +    M+ EG++++  T+ S+++  +     +    V   I S G   
Sbjct: 443 GYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSGYSMSGCSEEALAVINRIKSLGLTP 502

Query: 269 NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH 328
           NV                               VSW +MI G  +   + +AL  F +M 
Sbjct: 503 NV-------------------------------VSWTAMISGCCQNENYTDALQFFSQMQ 531

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD 388
             ++K +  T  ++L   A    L   + +H   +K GF    ++  ALIDMY+K G L 
Sbjct: 532 EENVKPNSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGKLK 591

Query: 389 CAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
            A  VF  +++K +  W  ++ G A +G  EE    F +M  +GI PD +  +++LS C 
Sbjct: 592 VAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDNMCKTGIRPDAITFTALLSGCK 651

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLVLVYAKCGCINDANRVFDSMHTR-DVIT 505
              ++  G +     +K+    + ++++   +V +  K G +++A     +M  + D   
Sbjct: 652 NSGLVMDGWKYFDS-MKTDYSINPTIEHYSCMVDLLGKAGFLDEALDFIHAMPQKADASI 710

Query: 506 WTALIMGC 513
           W A++  C
Sbjct: 711 WGAVLAAC 718



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 160/347 (46%), Gaps = 6/347 (1%)

Query: 231 VESNQFTFPSI---LTACAAVSARDFGAQVHGCILSSGFEAN-VYVQSALIDMYAKCGDL 286
           V S QF+ P           +   +   ++H  ++    + N V +  +++  Y + GD 
Sbjct: 21  VSSPQFSSPKFSPFFHPLGGIRTLNSVRELHAQMIKMPKKGNLVTMDGSMMRNYLEFGDF 80

Query: 287 DSARRLLEYSEIDNEVSWNSMIVGFAR-QGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           +SA ++       N + WNS +  FA   G   E L +FK++H + +K D      VL  
Sbjct: 81  ESATKVFFVGFARNYLLWNSFLEEFASFGGDSHEILEVFKELHDKGVKFDSKALTVVLKI 140

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
             + ++L     VH+ ++K GF+    ++ ALI++Y K   +D A  VF+    ++   W
Sbjct: 141 CLALMELWLGMEVHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQVFDETPLQEDFLW 200

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
            +++        +E+AL+    M+ +        +  +L AC +L  L  G+Q+H   ++
Sbjct: 201 NTIVMANLRSERWEDALELSRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIR 260

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
            G  S+ S+ NS+V +Y++   +  A  VFDS    ++ +W ++I   A NG    A   
Sbjct: 261 FGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYAVNGCLNGAWDL 320

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKP 572
           + +M +   KPD IT+  LL      G  EN      S+    G KP
Sbjct: 321 FREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSA-GFKP 366



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/340 (21%), Positives = 129/340 (37%), Gaps = 47/340 (13%)

Query: 32  SVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAA-----YANSGRLREA 86
           +VKP S     L+       + + G+     S + GF  +  IA      Y+  G+L+ A
Sbjct: 534 NVKPNSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGKLKVA 593

Query: 87  KKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLK 146
            ++F     K    W+ ++ GY+ YG   E F LF  M   G RP   T   +L  C   
Sbjct: 594 HEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDNMCKTGIRPDAITFTALLSGCKNS 653

Query: 147 GLLQRGEQFHGYAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWT 204
           GL+  G ++   ++KT + +N  +   + +VD+  K   + EA       P   +   W 
Sbjct: 654 GLVMDGWKYFD-SMKTDYSINPTIEHYSCMVDLLGKAGFLDEALDFIHAMPQKADASIW- 711

Query: 205 TMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS 264
                    G    A    +D+++                 A ++AR+         L  
Sbjct: 712 ---------GAVLAACRLHKDIKI-----------------AEIAARNLFR------LEP 739

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLEY--SEIDNEVSW---NSMIVGFARQG-FHK 318
              AN  +   +   + + GD++  +  +     +I N  SW      I  F+ +G  H 
Sbjct: 740 YNSANYVLMMNIYSTFERWGDVERLKESMTAMGVKIPNVWSWIQVRQTIHVFSTEGKSHP 799

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
           E   ++  ++    +I    Y    NC   NID +  + V
Sbjct: 800 EEGEIYFDLYQLISEIKKLGYVPDTNCVHQNIDDSEKEKV 839


>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 676

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 223/637 (35%), Positives = 361/637 (56%), Gaps = 3/637 (0%)

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHV-AWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
           L   YA+   +  AE      P   + + AW  ++  +S+     +A+  FR +      
Sbjct: 42  LATAYARAGDLAAAESTLATAPTSPSSIPAWNALLAAHSRGASPHEALRVFRALP-PAAR 100

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
            +  TF   L+ACA +     G  V      +G+  +++V S+++++YAKCG +D A ++
Sbjct: 101 PDSTTFTLALSACARLGDLATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKV 160

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
            +     + V+W++M+ GF   G   +A+ ++ +M    ++ D+     V+   A+  D 
Sbjct: 161 FDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDA 220

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
               SVH  +++   +    ++ +L+DMYAK G  D A  VF LM  ++ +SW++LI+  
Sbjct: 221 RMGASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQL 280

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
           A +G+ +EAL  F  M++SG+ P+   V   L AC++L +L+ G+ +H   L++     +
Sbjct: 281 AQYGNADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILRTLELDRM 340

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
            V  +++ +Y+KCG ++ A  +FD + +RD+I+W  +I  C  +G+G++AL  + +M   
Sbjct: 341 -VGTAVIDMYSKCGSLSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRN 399

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIE 592
             +PD+ TF  LL A SH+GL E  +++F  M   YGI+PG  H  C++DLL RSG + E
Sbjct: 400 EVRPDHATFASLLSALSHSGLVEEGKFWFNCMVNEYGIEPGEKHLVCIVDLLARSGLVEE 459

Query: 593 AKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYST 652
           A  L+  +  +P  ++  ALLS C  +  LELGE  A  + EL+P +      +SN+Y+ 
Sbjct: 460 ANGLVASLHSKPTISILVALLSGCLNNNKLELGESTAEKILELQPGDVGVLALVSNLYAA 519

Query: 653 AGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLL 712
           A  W     VRKLMK  G +K PGCS +E    +H F+ ED+ HP    I   + ++   
Sbjct: 520 AKNWYKVREVRKLMKDHGSKKAPGCSSIEIRGALHTFVMEDQSHPQHRQILQMVMKLDSE 579

Query: 713 IKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDC 772
           +++ GY+P   F  H++EE  KE  L+ HSE+LA AFGLL    G  + + KNLRVCGDC
Sbjct: 580 MRKMGYIPKTEFVYHDLEEGVKEQLLSRHSERLATAFGLLNTSPGTRLVVIKNLRVCGDC 639

Query: 773 HTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           H A+KY+S +  R I++RD+ RFHHFK G CSCGDYW
Sbjct: 640 HDAIKYMSKIADREIVVRDAKRFHHFKDGACSCGDYW 676



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 138/454 (30%), Positives = 229/454 (50%), Gaps = 15/454 (3%)

Query: 73  MIAAYANSGRLREAKKLFNETPFK--NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           +  AYA +G L  A+      P    +   W++L+  +S      EA  +F  +     R
Sbjct: 42  LATAYARAGDLAAAESTLATAPTSPSSIPAWNALLAAHSRGASPHEALRVFRALP-PAAR 100

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P   T    L  C+  G L  GE     A    +  + FV + ++++YAKC  + +A  +
Sbjct: 101 PDSTTFTLALSACARLGDLATGEVVTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKV 160

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F      ++ V W+TM+TG+   G   +AIE +  MR +G+E+++     ++ ACAA   
Sbjct: 161 FDRMRK-RDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGD 219

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              GA VHG +L    + +V + ++L+DMYAK G  D ARR+ E     N+VSW+++I  
Sbjct: 220 ARMGASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQ 279

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
            A+ G   EAL LF+ M    +  +       L   +    L   KS+H  I++T  E  
Sbjct: 280 LAQYGNADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILRT-LELD 338

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
           + V  A+IDMY+K G+L  A M+F+ +  +D+ISW  +I  C  HG   +AL  F +M+ 
Sbjct: 339 RMVGTAVIDMYSKCGSLSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKR 398

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQ-----QVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
           + + PDH   +S+LSA +   ++E G+      V+   ++ G    + +    V + A+ 
Sbjct: 399 NEVRPDHATFASLLSALSHSGLVEEGKFWFNCMVNEYGIEPGEKHLVCI----VDLLARS 454

Query: 486 GCINDANRVFDSMHTRDVIT-WTALIMGCAQNGK 518
           G + +AN +  S+H++  I+   AL+ GC  N K
Sbjct: 455 GLVEEANGLVASLHSKPTISILVALLSGCLNNNK 488



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 189/356 (53%), Gaps = 4/356 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  ++++  YA  G + +A K+F+    ++  TWS+++ G+ N G  ++A E++ +M+
Sbjct: 137 DIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMR 196

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            +G    +  +  V++ C+  G  + G   HGY ++    ++  + T LVDMYAK     
Sbjct: 197 RDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFD 256

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A  +F++ P  +N V+W+ +I+  +Q G   +A+  FR M+V G+  N       L AC
Sbjct: 257 QARRVFELMPH-RNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPNSGPVVGALLAC 315

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           + +     G  +HG IL +  E +  V +A+IDMY+KCG L SA+ L +     + +SWN
Sbjct: 316 SDLGLLKLGKSIHGFILRT-LELDRMVGTAVIDMYSKCGSLSSAQMLFDKVVSRDLISWN 374

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS-VHSLIVK 364
            MI      G  ++ALSLF++M   +++ D  T+ S+L+  + +  +   K   + ++ +
Sbjct: 375 VMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALSHSGLVEEGKFWFNCMVNE 434

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYE 419
            G E  +     ++D+ A+ G ++ A  +   +  K  IS   +L++GC  +   E
Sbjct: 435 YGIEPGEKHLVCIVDLLARSGLVEEANGLVASLHSKPTISILVALLSGCLNNNKLE 490



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 186/389 (47%), Gaps = 22/389 (5%)

Query: 241 ILTACAAVSARDFGAQVHGC-ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
           +L++CAA+       ++H   I+SS    +  + S L   YA+ GDL +A   L  +   
Sbjct: 9   LLSSCAALRTL---TRLHALLIVSSSASCHHILSSCLATAYARAGDLAAAESTLATAPTS 65

Query: 300 NEV--SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
                +WN+++   +R     EAL +F+ +     + D  T+   L+  A   DL   + 
Sbjct: 66  PSSIPAWNALLAAHSRGASPHEALRVFRALPP-AARPDSTTFTLALSACARLGDLATGEV 124

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           V       G+    FV ++++++YAK G +D A  VF+ M+ +D ++W++++TG    G 
Sbjct: 125 VTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQ 184

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
             +A++ +  MR  G+  D VV+  ++ ACA       G  VH   L+      + +  S
Sbjct: 185 PVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVISTS 244

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
           LV +YAK G  + A RVF+ M  R+ ++W+ALI   AQ G   EAL  +  M   G  P+
Sbjct: 245 LVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPN 304

Query: 538 YITFVGLLFACSHAGLAENARWYFE------SMDKVYGIKPGPDHYACMIDLLGRSGKLI 591
               VG L ACS  GL +  +           +D++ G          +ID+  + G L 
Sbjct: 305 SGPVVGALLACSDLGLLKLGKSIHGFILRTLELDRMVG--------TAVIDMYSKCGSLS 356

Query: 592 EAKALLDQMVGEPDATVWKALLSACRVHG 620
            A+ L D++V   D   W  +++ C  HG
Sbjct: 357 SAQMLFDKVVSR-DLISWNVMIACCGAHG 384



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 119/239 (49%), Gaps = 3/239 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G L       D     +++  YA +G   +A+++F   P +N  +WS+LI   + YG   
Sbjct: 228 GYLLRHAMQMDVVISTSLVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQYGNAD 287

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  LF  MQ+ G  P+   +   L  CS  GLL+ G+  HG+ ++T  +L+  V T ++
Sbjct: 288 EALGLFRMMQVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILRT-LELDRMVGTAVI 346

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMY+KC  +  A+ LF      ++ ++W  MI     +G G  A+  F++M+   V  + 
Sbjct: 347 DMYSKCGSLSSAQMLFDKVVS-RDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDH 405

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLL 293
            TF S+L+A +     + G     C+++  G E        ++D+ A+ G ++ A  L+
Sbjct: 406 ATFASLLSALSHSGLVEEGKFWFNCMVNEYGIEPGEKHLVCIVDLLARSGLVEEANGLV 464



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 6/115 (5%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK---- 96
           A++D +S  G +  A  LF+K+  RD  +WN MIA     GR R+A  LF E        
Sbjct: 344 AVIDMYSKCGSLSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRP 403

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQ 150
           +  T++SL+   S+ GL  E    F  M  E G  P +  L  ++ L +  GL++
Sbjct: 404 DHATFASLLSALSHSGLVEEGKFWFNCMVNEYGIEPGEKHLVCIVDLLARSGLVE 458


>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
          Length = 1309

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 223/555 (40%), Positives = 333/555 (60%), Gaps = 2/555 (0%)

Query: 256  QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
            QVH      G   N+ V + L+  Y+    LD A  L +   + + VSW+ M+ GFA+ G
Sbjct: 756  QVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVG 815

Query: 316  FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
             +      F+++     + D++T P V+       +L   + +H ++ K G +   FV  
Sbjct: 816  DYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCA 875

Query: 376  ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
            AL+DMY K   ++ A  +F+ M ++D+++WT +I G A  G+  E+L  F  MR  G+ P
Sbjct: 876  ALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVP 935

Query: 436  DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
            D V + +++ ACA+L  +   + +     +      + +  +++ ++AKCGC+  A  +F
Sbjct: 936  DKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIF 995

Query: 496  DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAE 555
            D M  ++VI+W+A+I     +G+G++AL  +  ML  G  P+ IT V LL+ACSHAGL E
Sbjct: 996  DRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVE 1055

Query: 556  NARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
                +F  M + Y ++    HY C++DLLGR+G+L EA  L+  M  E D  +W A L A
Sbjct: 1056 EGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGA 1115

Query: 616  CRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEP 675
            CR H D+ L E+AA +L EL+P N   Y+ LSN+Y+ AG+WED A++R LM  R ++K P
Sbjct: 1116 CRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKIP 1175

Query: 676  GCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKE 735
            G +W+E +++ H F   D  HP   +IY  +  +   ++  GYVPD NF LH+V+EE K 
Sbjct: 1176 GWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELK- 1234

Query: 736  IGLAY-HSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNR 794
            IG+ Y HSEKLA+AFGL+  P+  PIRI KNLRVCGDCHT  K +SA+  R II+RD+NR
Sbjct: 1235 IGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANR 1294

Query: 795  FHHFKAGNCSCGDYW 809
            FHHFK G CSCGDYW
Sbjct: 1295 FHHFKEGACSCGDYW 1309



 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 205/543 (37%), Positives = 311/543 (57%), Gaps = 8/543 (1%)

Query: 232 ESNQFTFPSILTA----CAAVSARDFGA--QVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           ES++F F   L       A V+ R+     QVH      G   N+ V + LI  Y+    
Sbjct: 50  ESSKFHFLQRLNPKFYISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRA 109

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           LD A  L +   + + VSW+ M+ GFA+ G +      F+++     + D++T P V+  
Sbjct: 110 LDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRA 169

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
                +L   + +H ++ K G +   FV  AL+DMY K   ++ A  +F+ MQ++D+++W
Sbjct: 170 CRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTW 229

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
           T +I G A  G   E+L  F  MR  G+ PD V + +++ ACA+L  +   + +     +
Sbjct: 230 TVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQR 289

Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
                 + +  +++ +YAKCGC+  A  +FD M  ++VI+W+A+I     +G+G++AL  
Sbjct: 290 KKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDL 349

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
           +  ML+ G  PD IT   LL+ACSHAGL E    +F SM + Y ++    HY C++DLLG
Sbjct: 350 FPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLG 409

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ 645
           R+G+L EA  L+  M  E D  +W A L ACR H D+ L E+AA +L EL+  N   YV 
Sbjct: 410 RAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVL 469

Query: 646 LSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSK 705
           LSN+Y+ AG+WED A++R LM  R ++K PG +W+E +++ H F   D  HP   +IY  
Sbjct: 470 LSNIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEM 529

Query: 706 IDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAY-HSEKLAVAFGLLTLPQGAPIRIFK 764
           +  +   ++  GYVPD NF LH+V+EE K IG+ Y HSEKLA+AFGL+  P+  PIRI K
Sbjct: 530 LKSLSNKLELVGYVPDTNFVLHDVDEELK-IGILYTHSEKLAIAFGLIATPEHTPIRIIK 588

Query: 765 NLR 767
           NLR
Sbjct: 589 NLR 591



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/385 (30%), Positives = 186/385 (48%), Gaps = 12/385 (3%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +I  Y+    L +A  LF+    ++  +WS ++ G++  G  I  F  F ++   G R
Sbjct: 98  NKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGAR 157

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  YTL  V+R C     LQ G   H    K   DL+ FV   LVDMY KC+ I +A +L
Sbjct: 158 PDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFL 217

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F    + ++ V WT MI GY++ G   +++  F  MR EGV  ++    +++ ACA + A
Sbjct: 218 FDKMQE-RDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGA 276

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
                 +   I    F+ +V + +A+IDMYAKCG ++SAR + +  E  N +SW++MI  
Sbjct: 277 MHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAA 336

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSL----IVKT 365
           +   G  ++AL LF  M +  +  D  T  S+L  C  + +     +   S+     V+T
Sbjct: 337 YGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRT 396

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALKY 424
             + Y  V    +D+  + G LD A  +   M  +KD   W + +  C  H     A K 
Sbjct: 397 DVKHYTCV----VDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKA 452

Query: 425 FSD-MRISGICPDHVVVSSILSACA 448
            +  + +    P H V+ S + A A
Sbjct: 453 ATSLLELQSQNPGHYVLLSNIYANA 477



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 189/392 (48%), Gaps = 26/392 (6%)

Query: 71   NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
            N ++  Y+    L +A  LF+    ++  +WS ++ G++  G  +  F  F ++   G R
Sbjct: 774  NKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGAR 833

Query: 131  PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            P  YTL  V+R C     LQ G   H    K   DL+ FV   LVDMY KC+ I +A +L
Sbjct: 834  PDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFL 893

Query: 191  FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
            F    + ++ V WT MI GY++ G   +++  F  MR EGV  ++    +++ ACA + A
Sbjct: 894  FDKMXE-RDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGA 952

Query: 251  RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
                  +   I    F+ +V + +A+IDM+AKCG ++SAR + +  E  N +SW++MI  
Sbjct: 953  MHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAA 1012

Query: 311  FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG---- 366
            +   G  ++AL LF  M    I  +  T  S+L  +A +         H+ +V+ G    
Sbjct: 1013 YGYHGQGRKALDLFPMMLRSGILPNKITLVSLL--YACS---------HAGLVEEGLRFF 1061

Query: 367  ---FEGYKFVNNA-----LIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGS 417
               +E Y    +      ++D+  + G LD A  ++ ++  +KD   W + +  C  H  
Sbjct: 1062 SXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKD 1121

Query: 418  YEEALKYFSD-MRISGICPDHVVVSSILSACA 448
               A K  +  + +    P H ++ S + A A
Sbjct: 1122 VXLAEKAATSLLELQPQNPGHYILLSNIYANA 1153



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/455 (25%), Positives = 208/455 (45%), Gaps = 42/455 (9%)

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG---KNHVAWTT 205
           L +  Q H  A       N  V   L+  Y+  + + +A  LF    DG   ++ V+W+ 
Sbjct: 75  LTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLF----DGMCVRDSVSWSV 130

Query: 206 MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
           M+ G+++ G        FR++   G   + +T P ++ AC  +     G  +H  +   G
Sbjct: 131 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 190

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
            + + +V +AL+DMY KC +++ AR L +  +  + V+W  MI G+A  G   E+L LF+
Sbjct: 191 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 250

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           KM    +  D     +V+   A    ++ A+ +   I +  F+    +  A+IDMYAK G
Sbjct: 251 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 310

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
            ++ A  +F+ M++K+VISW+++I    YHG   +AL  F  M  SG+ PD + ++S+L 
Sbjct: 311 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLY 370

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
           AC+   ++E G +           SS+  D S+                       DV  
Sbjct: 371 ACSHAGLVEEGLRFF---------SSMWEDYSV---------------------RTDVKH 400

Query: 506 WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMD 565
           +T ++    + G+  EAL+    M     +  +  F+G         LAE A     S+ 
Sbjct: 401 YTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAA---TSLL 457

Query: 566 KVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
           ++    PG  HY  + ++   +G+  +   + D M
Sbjct: 458 ELQSQNPG--HYVLLSNIYANAGRWEDVAKIRDLM 490



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 15/373 (4%)

Query: 149  LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG---KNHVAWTT 205
            L +  Q H  A       N  V   LV  Y+  + + +A  LF    DG   ++ V+W+ 
Sbjct: 751  LTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLF----DGMCVRDSVSWSV 806

Query: 206  MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
            M+ G+++ G        FR++   G   + +T P ++ AC  +     G  +H  +   G
Sbjct: 807  MVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 866

Query: 266  FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
             + + +V +AL+DMY KC +++ AR L +     + V+W  MI G+A  G   E+L LF 
Sbjct: 867  LDLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFD 926

Query: 326  KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
            KM    +  D     +V+   A    ++ A+++   I +  F+    +  A+IDM+AK G
Sbjct: 927  KMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCG 986

Query: 386  NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
             ++ A  +F+ M++K+VISW+++I    YHG   +AL  F  M  SGI P+ + + S+L 
Sbjct: 987  CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLY 1046

Query: 446  ACAELTVLEFGQQVHAVFLKSGGCSSLSVD----NSLVLVYAKCGCINDANRVFDSM-HT 500
            AC+   ++E G +  +   +     S+  D      +V +  + G +++A ++  SM   
Sbjct: 1047 ACSHAGLVEEGLRFFSXMWED---YSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXE 1103

Query: 501  RDVITWTALIMGC 513
            +D   W A +  C
Sbjct: 1104 KDEGLWGAFLGAC 1116



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 150/326 (46%), Gaps = 31/326 (9%)

Query: 351  DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
            +L   + VH      G      V N L+  Y+    LD A+ +F+ M  +D +SW+ ++ 
Sbjct: 750  NLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVG 809

Query: 411  GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
            G A  G Y      F ++   G  PD+  +  ++ AC +L  L+ G+ +H +  K G   
Sbjct: 810  GFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDL 869

Query: 471  SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
               V  +LV +Y KC  I DA  +FD M  RD++TWT +I G A+ G   E+L  +D+M 
Sbjct: 870  DHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMR 929

Query: 531  ARGTKPDYITFVGLLFACSHAGLAENARW---YFE----SMDKVYGIKPGPDHYACMIDL 583
              G  PD +  V ++FAC+  G    AR    Y +     +D + G          MID+
Sbjct: 930  EEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILG--------TAMIDM 981

Query: 584  LGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM----- 638
              + G +  A+ + D+M  E +   W A+++A   HG      R A +LF   PM     
Sbjct: 982  HAKCGCVESAREIFDRM-EEKNVISWSAMIAAYGYHGQ----GRKALDLF---PMMLRSG 1033

Query: 639  ---NAMPYVQLSNMYSTAGKWEDAAR 661
               N +  V L    S AG  E+  R
Sbjct: 1034 ILPNKITLVSLLYACSHAGLVEEGLR 1059



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 124/259 (47%), Gaps = 4/259 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D F    ++  Y     + +A+ LF++   ++  TW+ +I GY+  G   E+  LF +
Sbjct: 192 DLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEK 251

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+ EG  P +  +  V+  C+  G + +      Y  +  F L+  + T ++DMYAKC C
Sbjct: 252 MREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGC 311

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +  A  +F    + KN ++W+ MI  Y  +G G KA++ F  M   G+  ++ T  S+L 
Sbjct: 312 VESAREIFDRMEE-KNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLY 370

Query: 244 ACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           AC+     + G +    +        +V   + ++D+  + G LD A +L++   I+ + 
Sbjct: 371 ACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDE 430

Query: 303 SWNSMIVGFARQGFHKEAL 321
                 +G  R   HK+ +
Sbjct: 431 GLWGAFLGACRT--HKDVV 447



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 113/231 (48%), Gaps = 2/231 (0%)

Query: 64   DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
            D D F    ++  Y     + +A+ LF++   ++  TW+ +I GY+  G   E+  LF +
Sbjct: 868  DLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDK 927

Query: 124  MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
            M+ EG  P +  +  V+  C+  G + +      Y  +  F L+  + T ++DM+AKC C
Sbjct: 928  MREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGC 987

Query: 184  IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
            +  A  +F    + KN ++W+ MI  Y  +G G KA++ F  M   G+  N+ T  S+L 
Sbjct: 988  VESAREIFDRMEE-KNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLY 1046

Query: 244  ACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLL 293
            AC+     + G +    +        +V   + ++D+  + G LD A +L+
Sbjct: 1047 ACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLI 1097



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 112/274 (40%), Gaps = 73/274 (26%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           L  A++D ++  G ++ A ++F++M +++  +W+ MIAAY   G+ R+A           
Sbjct: 298 LGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKA----------- 346

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF-- 155
                                +LF  M   G  P + TL ++L  CS  GL++ G +F  
Sbjct: 347 --------------------LDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFS 386

Query: 156 ---HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
                Y+++T  D+  +  T +VD+  +   + EA  L K     K+   W         
Sbjct: 387 SMWEDYSVRT--DVKHY--TCVVDLLGRAGRLDEALKLIKSMTIEKDEGLW--------- 433

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYV 272
            G    A    +D+              +L   AA S  +  +Q  G  +     +N+Y 
Sbjct: 434 -GAFLGACRTHKDV--------------VLAEKAATSLLELQSQNPGHYV---LLSNIYA 475

Query: 273 QSALIDMYAKCGDLDSARRLLE-----YSEIDNE 301
            +   +  AK  DL S RRL +     + E+DN+
Sbjct: 476 NAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNK 509



 Score = 47.8 bits (112), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 5/91 (5%)

Query: 39   LNRALVDF-SNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF----NET 93
            L  A++D  +  G ++ A ++F++M +++  +W+ MIAAY   G+ R+A  LF       
Sbjct: 974  LGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSG 1033

Query: 94   PFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
               N  T  SL+Y  S+ GL  E    F  M
Sbjct: 1034 ILPNKITLVSLLYACSHAGLVEEGLRFFSXM 1064


>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g25970-like [Cucumis
           sativus]
          Length = 704

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 242/642 (37%), Positives = 369/642 (57%), Gaps = 6/642 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +T N ++  Y     LR A  LF+E P ++  +W+++I G+ N G    ++++   M+
Sbjct: 32  DVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRCMR 91

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G+   +YT  ++L+  +  G+   G+Q H   IK  +  N +  + L+DMYAKC+ + 
Sbjct: 92  SCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLE 151

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A YL  +     N V+W  MI GY+Q G    A      M  EG + +  T+  +L   
Sbjct: 152 DA-YLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLL 210

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE-IDNEVSW 304
                 +  +Q+HG I+  G E    + +ALI  Y+KCG LD A+R+ + S  I + V+W
Sbjct: 211 DDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTW 270

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIV 363
           NS++  +  +     A  L   M     + D ++Y S+++ CF  NI  NN +S+H L++
Sbjct: 271 NSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENIS-NNGRSLHGLVI 329

Query: 364 KTGFEGYKFVNNALIDMYAKQ--GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           K GFE    ++NALI MY K   G++  A  +F  ++ KD +SW S++TG +  GS E+A
Sbjct: 330 KRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDA 389

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           +K F  MR + +  DH   S++L +C++L   + GQQ+H + LK G  S+  V +SL+ +
Sbjct: 390 VKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFM 449

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           Y+KCG I DA R F+       ITW AL+ G AQ+G+   AL  +  M  +  K D+ITF
Sbjct: 450 YSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEXKKVKMDHITF 509

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
           V +L ACSH GL E    +   M+  YG+ P  +HYAC +DL GRSG+L EAKAL+++M 
Sbjct: 510 VAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMP 569

Query: 602 GEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
            +PD TVWK  L ACR  G++EL  + A +L E+EP     YV LSNMY    +W++ A+
Sbjct: 570 FKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLSNMYGNLMRWDEKAK 629

Query: 662 VRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIY 703
           V++LMK RG++K PG SW+E N+ VH FI++D  HP    IY
Sbjct: 630 VKRLMKERGVKKVPGWSWIEVNNNVHAFIAQDHSHPSCQQIY 671



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 156/583 (26%), Positives = 266/583 (45%), Gaps = 47/583 (8%)

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGY 215
           H  A+K     + +    +++ Y KCK +  A+ LF   P  ++ V+W TMI G+   G 
Sbjct: 21  HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMP-MRDSVSWNTMIAGHINCGN 79

Query: 216 GFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSA 275
              + +  R MR  G E +++TF S+L   A       G QVH  I+  G+  NVY  SA
Sbjct: 80  LEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSA 139

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           L+DMYAKC  L+ A          N VSWN+MI G+A+ G  + A  L   M     K+D
Sbjct: 140 LLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVD 199

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
           D TY  +L         N    +H  I+K G E    + NALI  Y+K G+LD A  +F+
Sbjct: 200 DGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFD 259

Query: 396 LMQD-KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLE 454
                +D+++W SL+         + A K   DM+  G  PD    +SI+SAC    +  
Sbjct: 260 SSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISN 319

Query: 455 FGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC--GCINDANRVFDSMHTRDVITWTALIMG 512
            G+ +H + +K G   S+ + N+L+ +Y K   G + +A  +F+S+  +D ++W +++ G
Sbjct: 320 NGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTG 379

Query: 513 CAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKP 572
            +Q G  ++A++ +  M +     D+ +F  +L +CS     +  +     +   YG++ 
Sbjct: 380 LSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQ-QIHVLALKYGLES 438

Query: 573 GPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNL 632
                + +I +  + G + +A+   ++   +  +  W AL+     HG   +   A +  
Sbjct: 439 NEFVSSSLIFMYSKCGIIEDARRSFEE-ASKNSSITWNALMFGYAQHGQCNV---ALDLF 494

Query: 633 FELE----PMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHI 688
           F +E     M+ + +V +    S  G  E   +  + M+S                    
Sbjct: 495 FLMEXKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMES-------------------- 534

Query: 689 FISEDRGHPLRTDIYS----------KIDEIMLLIKEAGYVPD 721
               D G P R + Y+          +++E   LI+E  + PD
Sbjct: 535 ----DYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPD 573


>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
          Length = 1133

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 224/649 (34%), Positives = 368/649 (56%), Gaps = 37/649 (5%)

Query: 198  KNHVAWTTMITGY-SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
            +N++ W + +  + S  G     +E F+++  +GV  +   +   L  C  V     G +
Sbjct: 485  RNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGME 544

Query: 257  VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
            +HGC++  GF+ +VY++ AL++ Y +C  L+ A ++         + WN  I+   +   
Sbjct: 545  IHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEK 604

Query: 317  HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID-LNNAKSVHSLIVKTGFEGYKFVNN 375
             ++ + LF+KM    +K +  T   VL    S +  LN  K  H  +++ GF+   +V  
Sbjct: 605  LQKGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGT 664

Query: 376  ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE---------------- 419
            +LIDMY K  +L  A  VF+ M+++++ +W SL++G ++ G +E                
Sbjct: 665  SLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKP 724

Query: 420  -------------------EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
                               EAL +F+ M+  G+ P+   ++ +L ACA L++L+ G+++H
Sbjct: 725  DLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIH 784

Query: 461  AVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGK 520
             + +++G    + V  +L+ +Y+K   + +A++VF  +  + + +W  +IMG A  G GK
Sbjct: 785  CLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGK 844

Query: 521  EALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACM 580
            EA+  +++M   G  PD ITF  LL AC ++GL      YF+SM   Y I P  +HY CM
Sbjct: 845  EAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCM 904

Query: 581  IDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNA 640
            +DLLGR+G L EA  L+  M  +PDAT+W ALL +CR+H +L+  E AA NLF+LEP N+
Sbjct: 905  VDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNS 964

Query: 641  MPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRT 700
              Y+ + N+YS   +WED   +R+LM + G+R     SW++ N +VH+F S+++ HP   
Sbjct: 965  ANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAG 1024

Query: 701  DIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPI 760
             IY ++ +++  +K+ GYVPD+N    N++E  K+  L  H+EKLA+ +GL+ +  G PI
Sbjct: 1025 KIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPI 1084

Query: 761  RIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            R+ KN R+C DCH+A KYIS V  R + LRD  RFHHF+ G CSC D+W
Sbjct: 1085 RVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 1133



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 126/482 (26%), Positives = 219/482 (45%), Gaps = 40/482 (8%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE-AFELFWQMQLEGY 129
             +I++Y   G    A  +F     +N+  W+S +  + +    +    E+F ++  +G 
Sbjct: 460 KNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGV 519

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
                     L+ C+    +  G + HG  IK  FDL+ ++   L++ Y +C  + +A  
Sbjct: 520 VFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQ 579

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC-AAV 248
           +F   P+ +  + W   I    Q+    K +E FR M+   +++   T   +L A  + +
Sbjct: 580 VFHEMPNPEA-LLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASISEL 638

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR------------------ 290
              + G + HG +L +GF+ +VYV ++LIDMY K   L SA+                  
Sbjct: 639 GFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLV 698

Query: 291 -------------RLLEYSEID----NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
                        RLL   E +    + V+WN MI G+A  G  KEAL+ F +M    + 
Sbjct: 699 SGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVM 758

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
            +  +   +L   AS   L   K +H L ++ GF    FV  ALIDMY+K  +L  A  V
Sbjct: 759 PNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKV 818

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           F  +Q+K + SW  +I G A  G  +EA+  F++M+  G+ PD +  +++LSAC    ++
Sbjct: 819 FRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLI 878

Query: 454 EFG-QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIM 511
             G +   ++         L     +V +  + G +++A  +  +M  + D   W AL+ 
Sbjct: 879 GEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLG 938

Query: 512 GC 513
            C
Sbjct: 939 SC 940



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 185/403 (45%), Gaps = 49/403 (12%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWS-SLIYGYSNYGLD 114
           G L ++  D D +    ++  Y     L +A ++F+E P      W+ ++I    +  L 
Sbjct: 547 GCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQ 606

Query: 115 IEAFELFWQMQLEGYRPSQYTLDNVLRLC-SLKGLLQRGEQFHGYAIKTCFDLNAFVVTG 173
            +  ELF +MQ    +    T+  VL+   S  G L  G++ HGY ++  FD + +V T 
Sbjct: 607 -KGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTS 665

Query: 174 LVDMYAKCKCIFEAEYLFK---------------------MFPDG-------------KN 199
           L+DMY K   +  A+ +F                      MF D               +
Sbjct: 666 LIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPD 725

Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG 259
            V W  MI+GY+  G G +A+  F  M+ EGV  N  +   +L ACA++S    G ++H 
Sbjct: 726 LVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHC 785

Query: 260 CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKE 319
             + +GF  +V+V +ALIDMY+K   L +A ++    +     SWN MI+GFA  G  KE
Sbjct: 786 LSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKE 845

Query: 320 ALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNN--- 375
           A+S+F +M    +  D  T+ ++L+ C  S +     K   S+I       Y+ V     
Sbjct: 846 AISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMIT-----DYRIVPRLEH 900

Query: 376 --ALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYH 415
              ++D+  + G LD A+ + + M  K D   W +L+  C  H
Sbjct: 901 YCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIH 943



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 109/261 (41%), Gaps = 10/261 (3%)

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC-AYHGSYEEALKYFSDMRISGICP 435
           LI  Y   G+   A MVF +   ++ + W S +    +  GS    L+ F ++   G+  
Sbjct: 462 LISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVF 521

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           D  V S  L  C  +  +  G ++H   +K G    + +  +L+  Y +C  +  AN+VF
Sbjct: 522 DSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVF 581

Query: 496 DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAE 555
             M   + + W   I+   Q+ K ++ ++ + +M     K +  T V +L     A ++E
Sbjct: 582 HEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVL----QASISE 637

Query: 556 NARWYFESMDKVYGIKPGPD----HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKA 611
                       Y ++ G D        +ID+  ++  L  A+A+ D M    +   W +
Sbjct: 638 LGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNR-NIFAWNS 696

Query: 612 LLSACRVHGDLELGERAANNL 632
           L+S     G  E   R  N +
Sbjct: 697 LVSGYSFKGMFEDALRLLNQM 717


>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Brachypodium distachyon]
          Length = 706

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 266/742 (35%), Positives = 394/742 (53%), Gaps = 59/742 (7%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N  IA    +G +  A+  F+  P +   ++++LI GY    L   A  LF +M      
Sbjct: 21  NARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRM------ 74

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV--TGLVDMYAKCKCIFEAE 188
           PS+        +  L   L+R       A      L   VV  T L+  Y +   + +A 
Sbjct: 75  PSRDLGSYNALIAGLS--LRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAI 132

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
            LF   P+ +NHV +T ++ G+   G   +A + F +M  + V +          A    
Sbjct: 133 RLFHQMPE-RNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDVVARTAMLSGYCQAGRIT 191

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
            AR         +     + NV   +A+I  YA+ G +  AR+L E     NEVSW +M+
Sbjct: 192 EAR--------ALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDRNEVSWTAML 243

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
           VG+ + G  ++A  LF  M           +P V  C                       
Sbjct: 244 VGYIQAGHVEDAEDLFNAMP---------DHP-VAAC----------------------- 270

Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
                 NA++  + + G +D A  +F  M  +D  +W+++I     +    EAL  F +M
Sbjct: 271 ------NAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLMEALSTFREM 324

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
              GI P++    SIL+ CA L   ++G+++HA  L+    + +   ++L+ +Y KCG +
Sbjct: 325 LCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNL 384

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
           + A RVF+    +DV+ W ++I G AQ+G G+EAL  +D +      PD IT++G+L AC
Sbjct: 385 DKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGITYIGVLTAC 444

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           S+ G  +  R  F SM     I+ G  HY+CM+DLLGR+G + EA  L++ M  EPDA +
Sbjct: 445 SYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDLINNMPVEPDAII 504

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           W AL+ ACR+H + E+ E AA  L ELEP +A PYV LS++Y++ G+WEDA+ +RK + S
Sbjct: 505 WGALMGACRMHKNAEIAEVAAKKLLELEPGSAGPYVLLSHIYTSTGRWEDASDMRKFISS 564

Query: 669 RGIRKEPGCSWVETNSQVHIFISED-RGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALH 727
           R + K PGCSW+E N  VH+F S D   HP    I + ++E+  L+ E+GY  D +F LH
Sbjct: 565 RNLNKSPGCSWIEYNKMVHLFTSGDVLSHPEHAIILNMLEELDGLLMESGYSADGSFVLH 624

Query: 728 NVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHI 787
           +V+EE K   L YHSE+ AVA+GLL +P G PIR+ KNLRVCGDCH+A+K I+ +  R I
Sbjct: 625 DVDEEQKAQSLRYHSERQAVAYGLLKVPAGMPIRVMKNLRVCGDCHSAIKLITKITSREI 684

Query: 788 ILRDSNRFHHFKAGNCSCGDYW 809
           ILRD+NRFHHFK G CSC DYW
Sbjct: 685 ILRDANRFHHFKDGLCSCRDYW 706



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 199/392 (50%), Gaps = 39/392 (9%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           F ++G ++EA +LF++M D+D      M++ Y  +GR+ EA+ LF+E P +N  +W+++I
Sbjct: 153 FLDAGRVNEARKLFDEMPDKDVVARTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMI 212

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG------EQFHGYA 159
            GY+  G  I A +LF  M      P +   + V     L G +Q G      + F+   
Sbjct: 213 SGYAQNGKVILARKLFEVM------PDR---NEVSWTAMLVGYIQAGHVEDAEDLFNAMP 263

Query: 160 IKTCFDLNAFVVT----GLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGY 215
                  NA +V     G+VD     K +FE     +M    ++   W+ MI  Y QN +
Sbjct: 264 DHPVAACNAMMVGFGQHGMVD---AAKAMFE-----RMC--ARDDGTWSAMIKVYEQNEF 313

Query: 216 GFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSA 275
             +A+  FR+M   G+  N  +F SILT CAA++  D+G ++H  +L   F+ +V+  SA
Sbjct: 314 LMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSA 373

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           LI MY KCG+LD A+R+    E  + V WNSMI G+A+ G  +EAL +F  +    +  D
Sbjct: 374 LITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPD 433

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLI-----VKTGFEGYKFVNNALIDMYAKQGNLDCA 390
             TY  VL   +    +   + + + +     ++ G   Y    + ++D+  + G +D A
Sbjct: 434 GITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHY----SCMVDLLGRAGLVDEA 489

Query: 391 F-MVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
             ++ N+  + D I W +L+  C  H + E A
Sbjct: 490 LDLINNMPVEPDAIIWGALMGACRMHKNAEIA 521



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 237/508 (46%), Gaps = 68/508 (13%)

Query: 49  SGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF---------- 98
           +G I+ A   F+ M  R   ++N +IA Y  +     A  LF+  P ++           
Sbjct: 30  AGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPSRDLGSYNALIAGL 89

Query: 99  -----------------------FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYT 135
                                   +++SL+ GY  +GL  +A  LF QM      P +  
Sbjct: 90  SLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRLFHQM------PER-- 141

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAI-KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
            ++V     L G L  G       +     D +    T ++  Y +   I EA  LF   
Sbjct: 142 -NHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDVVARTAMLSGYCQAGRITEARALFDEM 200

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT----ACAAVSA 250
           P  +N V+WT MI+GY+QNG    A + F  M     + N+ ++ ++L     A     A
Sbjct: 201 PK-RNVVSWTAMISGYAQNGKVILARKLFEVMP----DRNEVSWTAMLVGYIQAGHVEDA 255

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            D        + ++  +  V   +A++  + + G +D+A+ + E     ++ +W++MI  
Sbjct: 256 ED--------LFNAMPDHPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKV 307

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           + +  F  EALS F++M  R I+ +  ++ S+L   A+    +  + +H+ +++  F+  
Sbjct: 308 YEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFDTD 367

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
            F  +ALI MY K GNLD A  VFN+ + KDV+ W S+ITG A HG  EEAL  F D+R+
Sbjct: 368 VFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRL 427

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS----LVLVYAKCG 486
           + + PD +    +L+AC+    ++ G++   +F   G  SS+ +  +    +V +  + G
Sbjct: 428 ARMAPDGITYIGVLTACSYTGKVKEGRE---IFNSMGMNSSIRLGAAHYSCMVDLLGRAG 484

Query: 487 CINDANRVFDSMHTR-DVITWTALIMGC 513
            +++A  + ++M    D I W AL+  C
Sbjct: 485 LVDEALDLINNMPVEPDAIIWGALMGAC 512



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 137/279 (49%), Gaps = 4/279 (1%)

Query: 43  LVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWS 102
           LV +  +G +++A  LF  M D      N M+  +   G +  AK +F     ++  TWS
Sbjct: 243 LVGYIQAGHVEDAEDLFNAMPDHPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWS 302

Query: 103 SLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT 162
           ++I  Y      +EA   F +M   G RP+  +  ++L +C+       G + H   ++ 
Sbjct: 303 AMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRC 362

Query: 163 CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIEC 222
            FD + F V+ L+ MY KC  + +A+ +F MF + K+ V W +MITGY+Q+G G +A+  
Sbjct: 363 SFDTDVFAVSALITMYIKCGNLDKAKRVFNMF-EPKDVVMWNSMITGYAQHGLGEEALGI 421

Query: 223 FRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI-LSSGFEANVYVQSALIDMYA 281
           F D+R+  +  +  T+  +LTAC+       G ++   + ++S         S ++D+  
Sbjct: 422 FDDLRLARMAPDGITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLG 481

Query: 282 KCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEA 320
           + G +D A  L+    ++ +      ++G  R   HK A
Sbjct: 482 RAGLVDEALDLINNMPVEPDAIIWGALMGACR--MHKNA 518



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 153/362 (42%), Gaps = 75/362 (20%)

Query: 262 LSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEAL 321
           L S     V   +A I    + G+++ AR   +   +    S+N++I G+ R      AL
Sbjct: 9   LPSSTAPAVVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAAL 68

Query: 322 SLFKKMHARDIKIDDFTYPSVLNCFASNIDL------NNAKSVHSLIVKTGFEGYKFVNN 375
            LF +M +RD+           N   + + L      + A ++ S+ +      +     
Sbjct: 69  GLFHRMPSRDL--------GSYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSF----T 116

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
           +L+  Y + G L  A  +F+ M +++ +++T L+ G    G   EA K F +M      P
Sbjct: 117 SLLRGYVRHGLLADAIRLFHQMPERNHVTYTVLLGGFLDAGRVNEARKLFDEM------P 170

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
           D  VV+                                   +++  Y + G I +A  +F
Sbjct: 171 DKDVVAR---------------------------------TAMLSGYCQAGRITEARALF 197

Query: 496 DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAE 555
           D M  R+V++WTA+I G AQNGK   A + ++ M  R    + +++  +L     AG  E
Sbjct: 198 DEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDR----NEVSWTAMLVGYIQAGHVE 253

Query: 556 NARWYFESMDKVYGIKPGPDH--YAC--MIDLLGRSGKLIEAKALLDQMVGEPDATVWKA 611
           +A   F +M         PDH   AC  M+   G+ G +  AKA+ ++M    D T W A
Sbjct: 254 DAEDLFNAM---------PDHPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGT-WSA 303

Query: 612 LL 613
           ++
Sbjct: 304 MI 305



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 94/253 (37%), Gaps = 61/253 (24%)

Query: 463 FLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEA 522
           FL S    ++   N+ +    + G I  A   FD+M  R   ++ ALI G  +N     A
Sbjct: 8   FLPSSTAPAVVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAA 67

Query: 523 LQFYDQM----------------LARGTKPD-------------YITFVGLLFACSHAGL 553
           L  + +M                L R T PD              ++F  LL      GL
Sbjct: 68  LGLFHRMPSRDLGSYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGL 127

Query: 554 AENARWYFESMD------------------------KVYGIKPGPDHYACMIDLLG--RS 587
             +A   F  M                         K++   P  D  A    L G  ++
Sbjct: 128 LADAIRLFHQMPERNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDVVARTAMLSGYCQA 187

Query: 588 GKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEP-MNAMPYVQL 646
           G++ EA+AL D+M  + +   W A++S    +G + L    A  LFE+ P  N + +  +
Sbjct: 188 GRITEARALFDEM-PKRNVVSWTAMISGYAQNGKVIL----ARKLFEVMPDRNEVSWTAM 242

Query: 647 SNMYSTAGKWEDA 659
              Y  AG  EDA
Sbjct: 243 LVGYIQAGHVEDA 255


>gi|222632633|gb|EEE64765.1| hypothetical protein OsJ_19621 [Oryza sativa Japonica Group]
          Length = 656

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 241/664 (36%), Positives = 371/664 (55%), Gaps = 38/664 (5%)

Query: 147 GLLQRGEQFHGYAIKTC-FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTT 205
           G L  G+  H   ++   FD+  +    L+ +Y KC  +  A  +F   P  +N V+   
Sbjct: 30  GELSLGKAVHARVVRAARFDVVQY--NNLIALYVKCGRLGLARQVFDAMPS-RNPVSGNL 86

Query: 206 MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
           +++GY+ +G    A+     +RV     N++   S + A A V + D G Q HG  + +G
Sbjct: 87  LMSGYASSGRHRDALAL---LRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAG 143

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
              + YV SA++ MY +C  +D                               EA+   K
Sbjct: 144 LAEHPYVCSAVLHMYCQCAHMD-------------------------------EAVKYSK 172

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           K   +   +       VL   AS  ++     VH+  +K   E   +V +AL+DMY K  
Sbjct: 173 KHGEKCRAMGSCVICRVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCD 232

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
               A  VF ++ +K+++SWT+++T    +  +E+AL+ F DM + G+ P+    +  L+
Sbjct: 233 FPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALN 292

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
           +CA L  L+ G  + A  +K+G    L V N+L+ +Y+K G + DA RVF SM  RDV++
Sbjct: 293 SCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVS 352

Query: 506 WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMD 565
           W ++I+G A +G+ +EA++ +  ML     P Y+TF+G+L AC+  GL +   +Y   M 
Sbjct: 353 WNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMM 412

Query: 566 KVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELG 625
           K  G+KPG +HY CM+ LL R G+L EA+  ++      D   W++LLS+C+V+ +  LG
Sbjct: 413 KEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLG 472

Query: 626 ERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQ 685
            R A  +F+L+P +   YV LSNMY+ A +W+   +VR+LM+  G+RKEPG SW++  S+
Sbjct: 473 HRVAEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSE 532

Query: 686 VHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKL 745
           VH+F SED+ HP    I  K+ E++  IK  GYVP++  ALH+VE+E KE  L YHSEKL
Sbjct: 533 VHVFTSEDKKHPYMEQITKKLQELIDKIKVIGYVPNIAVALHDVEDEQKEEHLMYHSEKL 592

Query: 746 AVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSC 805
           A+AFGL+  P+G  IRI KN+R+C DCH A+K IS    R I++RD+ RFH  + G CSC
Sbjct: 593 ALAFGLIRTPKGEAIRIMKNVRICDDCHVAIKLISLATGRRIVVRDTVRFHCIEDGVCSC 652

Query: 806 GDYW 809
            DYW
Sbjct: 653 DDYW 656



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 133/450 (29%), Positives = 214/450 (47%), Gaps = 37/450 (8%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D   +N +IA Y   GRL  A+++F+  P +N  + + L+ GY++ G   +A  L   ++
Sbjct: 49  DVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSGYASSGRHRDALAL---LR 105

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           +  +  ++Y L + +   +       G Q HGYAIK     + +V + ++ MY +C  + 
Sbjct: 106 VADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHPYVCSAVLHMYCQCAHMD 165

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           EA                      YS+     K  E  R M              +L  C
Sbjct: 166 EA--------------------VKYSK-----KHGEKCRAM-------GSCVICRVLGHC 193

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A+      G+QVH   L    E NVYV SAL+DMY KC     A R+ E     N VSW 
Sbjct: 194 ASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWT 253

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +++  + +    ++AL LF  M    ++ ++FTY   LN  A    L N  ++ +  +KT
Sbjct: 254 AIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKT 313

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G  G   V NAL++MY+K G+++ A  VF  M  +DV+SW S+I G A+HG   EA++ F
Sbjct: 314 GHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAF 373

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD-NSLVLVYAK 484
            DM  +   P +V    +LSACA+L +++ G     + +K  G          +V +  +
Sbjct: 374 HDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCR 433

Query: 485 CGCINDANRVFDSMHT-RDVITWTALIMGC 513
            G +++A R  +S     DV+ W +L+  C
Sbjct: 434 VGRLDEAERFIESNCIGTDVVAWRSLLSSC 463



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 123/254 (48%), Gaps = 3/254 (1%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
           Q  ++  + + +  + ++  Y       EA ++F   P KN  +W++++  Y+   L  +
Sbjct: 208 QALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFED 267

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
           A +LF  M++EG RP+++T    L  C+    L+ G       +KT       V   L++
Sbjct: 268 ALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMN 327

Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
           MY+K   + +A  +F   P  ++ V+W ++I GY+ +G   +A+E F DM       +  
Sbjct: 328 MYSKSGSVEDARRVFLSMP-CRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYV 386

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
           TF  +L+ACA +   D G      ++   G +      + ++ +  + G LD A R +E 
Sbjct: 387 TFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIES 446

Query: 296 SEIDNE-VSWNSMI 308
           + I  + V+W S++
Sbjct: 447 NCIGTDVVAWRSLL 460



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 4/155 (2%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++  Y+ SG + +A+++F   P ++  +W+S+I GY+++G   EA E F  M      
Sbjct: 323 NALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEV 382

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC-FDLNAFVVTGLVDMYAKCKCIFEAEY 189
           PS  T   VL  C+  GL+  G  +    +K           T +V +  +   + EAE 
Sbjct: 383 PSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAER 442

Query: 190 LFKMFPDGKNHVAWTTMITG---YSQNGYGFKAIE 221
             +    G + VAW ++++    Y   G G +  E
Sbjct: 443 FIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRVAE 477



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 5/115 (4%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF----KNFFTW 101
           +S SG +++A ++F  M  RD  +WN++I  YA+ GR REA + F++  F     ++ T+
Sbjct: 329 YSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTF 388

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
             ++   +  GL  E F     M  E G +P +     ++ L    G L   E+F
Sbjct: 389 IGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERF 443


>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Cucumis sativus]
          Length = 704

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 242/642 (37%), Positives = 369/642 (57%), Gaps = 6/642 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +T N ++  Y     LR A  LF+E P ++  +W+++I G+ N G    ++++   M+
Sbjct: 32  DVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRCMR 91

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G+   +YT  ++L+  +  G+   G+Q H   IK  +  N +  + L+DMYAKC+ + 
Sbjct: 92  SCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLE 151

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A YL  +     N V+W  MI GY+Q G    A      M  EG + +  T+  +L   
Sbjct: 152 DA-YLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLL 210

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE-IDNEVSW 304
                 +  +Q+HG I+  G E    + +ALI  Y+KCG LD A+R+ + S  I + V+W
Sbjct: 211 DDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTW 270

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIV 363
           NS++  +  +     A  L   M     + D ++Y S+++ CF  NI  NN +S+H L++
Sbjct: 271 NSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENIS-NNGRSLHGLVI 329

Query: 364 KTGFEGYKFVNNALIDMYAKQ--GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           K GFE    ++NALI MY K   G++  A  +F  ++ KD +SW S++TG +  GS E+A
Sbjct: 330 KRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSEDA 389

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           +K F  MR + +  DH   S++L +C++L   + GQQ+H + LK G  S+  V +SL+ +
Sbjct: 390 VKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLIFM 449

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           Y+KCG I DA R F+       ITW AL+ G AQ+G+   AL  +  M  +  K D+ITF
Sbjct: 450 YSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEEKKVKMDHITF 509

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
           V +L ACSH GL E    +   M+  YG+ P  +HYAC +DL GRSG+L EAKAL+++M 
Sbjct: 510 VAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMP 569

Query: 602 GEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
            +PD TVWK  L ACR  G++EL  + A +L E+EP     YV LSNMY    +W++ A+
Sbjct: 570 FKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLSNMYGNLMRWDEKAK 629

Query: 662 VRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIY 703
           V++LMK RG++K PG SW+E N+ VH FI++D  HP    IY
Sbjct: 630 VKRLMKERGVKKVPGWSWIEVNNNVHAFIAQDHSHPSCQQIY 671



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 156/583 (26%), Positives = 266/583 (45%), Gaps = 47/583 (8%)

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGY 215
           H  A+K     + +    +++ Y KCK +  A+ LF   P  ++ V+W TMI G+   G 
Sbjct: 21  HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMP-MRDSVSWNTMIAGHINCGN 79

Query: 216 GFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSA 275
              + +  R MR  G E +++TF S+L   A       G QVH  I+  G+  NVY  SA
Sbjct: 80  LEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSA 139

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           L+DMYAKC  L+ A          N VSWN+MI G+A+ G  + A  L   M     K+D
Sbjct: 140 LLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVD 199

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
           D TY  +L         N    +H  I+K G E    + NALI  Y+K G+LD A  +F+
Sbjct: 200 DGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFD 259

Query: 396 LMQD-KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLE 454
                +D+++W SL+         + A K   DM+  G  PD    +SI+SAC    +  
Sbjct: 260 SSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISN 319

Query: 455 FGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC--GCINDANRVFDSMHTRDVITWTALIMG 512
            G+ +H + +K G   S+ + N+L+ +Y K   G + +A  +F+S+  +D ++W +++ G
Sbjct: 320 NGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTG 379

Query: 513 CAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKP 572
            +Q G  ++A++ +  M +     D+ +F  +L +CS     +  +     +   YG++ 
Sbjct: 380 LSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQ-QIHVLALKYGLES 438

Query: 573 GPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNL 632
                + +I +  + G + +A+   ++   +  +  W AL+     HG   +   A +  
Sbjct: 439 NEFVSSSLIFMYSKCGIIEDARRSFEE-ASKNSSITWNALMFGYAQHGQCNV---ALDLF 494

Query: 633 FELE----PMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHI 688
           F +E     M+ + +V +    S  G  E   +  + M+S                    
Sbjct: 495 FLMEEKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMES-------------------- 534

Query: 689 FISEDRGHPLRTDIYS----------KIDEIMLLIKEAGYVPD 721
               D G P R + Y+          +++E   LI+E  + PD
Sbjct: 535 ----DYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPD 573


>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 232/589 (39%), Positives = 345/589 (58%), Gaps = 40/589 (6%)

Query: 261 ILSSGFEANVYVQSALIDMYAKCG--DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
           ++ +GF ++ +  S L+          LD + ++ +  E  N   WN+M+  + +    +
Sbjct: 52  MILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAE 111

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           +AL L+K M   ++  D++TYP V+   A  +     K +H  ++K GF+   +V N LI
Sbjct: 112 KALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLI 171

Query: 379 DMYAKQGN-------------LDC---------------------AFMVFNLMQDKDVIS 404
           +MYA  GN             LD                      A+ +FN M +KD++S
Sbjct: 172 NMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVS 231

Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
           W++LI+G   +G YEEAL  F +M  +G+  D VVV S+LSACA L++++ G+ +H + +
Sbjct: 232 WSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVI 291

Query: 465 KSGGCSSLSVDNSLVLVYA----KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGK 520
           + G  S +++ N+L+ +Y+    KCGC+ +A  VF+ M  + V +W ALI+G A NG  +
Sbjct: 292 RMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVE 351

Query: 521 EALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACM 580
            +L  + +M   G  P+ ITF+G+L AC H GL +  R +F SM + +GI+P   HY CM
Sbjct: 352 RSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCM 411

Query: 581 IDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNA 640
           +DLLGR+G L EA+ L++ M   PD   W ALL AC+ HGD E+GER    L EL+P + 
Sbjct: 412 VDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHD 471

Query: 641 MPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRT 700
             +V LSN++++ G WED   VR +MK +G+ K PGCS +E N  VH F++ D+ HP   
Sbjct: 472 GFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWIN 531

Query: 701 DIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPI 760
            +   ++E+   +K  GY PD N    +++EE KE  L  HSEKLA+AFGLLT+    PI
Sbjct: 532 KVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLTISPPTPI 591

Query: 761 RIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           RI KNLR+C DCHTA K IS  Y R I++RD +RFH+FK G CSC DYW
Sbjct: 592 RIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 640



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 218/431 (50%), Gaps = 53/431 (12%)

Query: 166 LNAFVVTGLV-DMYAKCKCI--------FEAEYLFKMFP--DGKNHVAWTTMITGYSQNG 214
           L+  ++TG + D +A  + +           +Y  ++F   +  N   W TM+  Y Q+ 
Sbjct: 49  LSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSN 108

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQS 274
              KA+  ++ M    V  + +T+P ++ ACA       G ++H  +L  GF+++VYVQ+
Sbjct: 109 SAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQN 168

Query: 275 ALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ-------------------- 314
            LI+MYA CG++  AR+L + S + + VSWNS++ G+ ++                    
Sbjct: 169 TLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKD 228

Query: 315 --------------GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
                         G ++EAL +F +M+A  +++D+    SVL+  A    +   K +H 
Sbjct: 229 MVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHG 288

Query: 361 LIVKTGFEGYKFVNNALI----DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
           L+++ G E Y  + NALI    DMY K G ++ A  VFN M++K V SW +LI G A +G
Sbjct: 289 LVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNG 348

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVD 475
             E +L  FS+M+ +G+ P+ +    +L AC  + +++ G+   A  ++  G   ++   
Sbjct: 349 LVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHY 408

Query: 476 NSLVLVYAKCGCINDANRVFDSM-HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
             +V +  + G +N+A ++ +SM    DV TW AL+  C ++G  +   +   +++    
Sbjct: 409 GCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIE--L 466

Query: 535 KPDYITFVGLL 545
           +PD+  F  LL
Sbjct: 467 QPDHDGFHVLL 477



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 121/470 (25%), Positives = 214/470 (45%), Gaps = 80/470 (17%)

Query: 52  IDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNY 111
           +D + Q+F+++ + +GF WNTM+ AY  S    +A  L+              +   +N 
Sbjct: 79  LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYK-------------LMVKNNV 125

Query: 112 GLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV 171
           G                  P  YT   V++ C+++ L   G++ H + +K  FD + +V 
Sbjct: 126 G------------------PDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQ 167

Query: 172 TGLVDMYAKCKCIFEAEYLFKMFP---------------------------------DGK 198
             L++MYA C  + +A  LF   P                                 D K
Sbjct: 168 NTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEK 227

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           + V+W+ +I+GY QNG   +A+  F +M   G+  ++    S+L+ACA +S    G  +H
Sbjct: 228 DMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIH 287

Query: 259 GCILSSGFEANVYVQSALI----DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
           G ++  G E+ V +Q+ALI    DMY KCG +++A  +    E     SWN++I+G A  
Sbjct: 288 GLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVN 347

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH--SLIVKTGFEGYKF 372
           G  + +L +F +M    +  ++ T+  VL     ++ L +    H  S+I K G E    
Sbjct: 348 GLVERSLDMFSEMKNNGVIPNEITFMGVLGA-CRHMGLVDEGRCHFASMIEKHGIEPNVK 406

Query: 373 VNNALIDMYAKQGNLDCA-FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
               ++D+  + G L+ A  ++ ++    DV +W +L+  C  HG  E   +     ++ 
Sbjct: 407 HYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERV--GRKLI 464

Query: 432 GICPD----HVVVSSILSACAELT-VLEF-GQQVHAVFLKSGGCSSLSVD 475
            + PD    HV++S+I ++  +   VLE  G       +K+ GCS +  +
Sbjct: 465 ELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEAN 514



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 158/326 (48%), Gaps = 11/326 (3%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAY---ANSGRLREAKKLFNETPFKNFFTWSSLIY 106
           G + +A +LF++    D  +WN+++A Y    + G++ EA KLFNE   K+  +WS+LI 
Sbjct: 178 GNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALIS 237

Query: 107 GYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDL 166
           GY   G+  EA  +F +M   G R  +  + +VL  C+   +++ G+  HG  I+   + 
Sbjct: 238 GYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIES 297

Query: 167 NAFVVTGLV----DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIEC 222
              +   L+    DMY KC C+  A  +F    + K   +W  +I G + NG   ++++ 
Sbjct: 298 YVNLQNALIHMYSDMYMKCGCVENALEVFNGMEE-KGVSSWNALIIGLAVNGLVERSLDM 356

Query: 223 FRDMRVEGVESNQFTFPSILTACAAVSARDFG-AQVHGCILSSGFEANVYVQSALIDMYA 281
           F +M+  GV  N+ TF  +L AC  +   D G       I   G E NV     ++D+  
Sbjct: 357 FSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLG 416

Query: 282 KCGDLDSARRLLEYSEIDNEV-SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
           + G L+ A +L+E   +  +V +W +++    + G  +    + +K+       D F + 
Sbjct: 417 RAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGF-HV 475

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTG 366
            + N FAS  D  +   V  ++ + G
Sbjct: 476 LLSNIFASKGDWEDVLEVRGMMKQQG 501


>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 232/569 (40%), Positives = 356/569 (62%)

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           +L + A   A   G   H  I+  G  A+    + L++MY+KCG ++SAR+L +   + +
Sbjct: 53  LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRS 112

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
            VSWN+M+    + G  ++AL LF +M        +FT  SV+   A+   +   K +H 
Sbjct: 113 LVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHG 172

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
             +KT  +   FV  AL+D+YAK G +  A +VF  M ++  ++W+S++ G   +  YEE
Sbjct: 173 FALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEE 232

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
           AL  F   +  G+  +   +SS LSACA    L  G+QV AV  K+G  S++ V +SL+ 
Sbjct: 233 ALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLID 292

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           +YAKCG I +A  VF S+  ++V+ W A++ G +++ +  EA+ ++++M   G  P+ IT
Sbjct: 293 MYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDIT 352

Query: 541 FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
           ++ +L ACSH GL E  R YF+ M +V+ + P   HY+CM+D+LGR+G L EAK  +D+M
Sbjct: 353 YISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRM 412

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAA 660
             +  A++W +LL++CR++ +LEL E AA +LFE+EP NA  +V LSN+Y+   +WE+ A
Sbjct: 413 PFDATASMWGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVA 472

Query: 661 RVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
           R R L+K    +KE G SW+E   +VH F+  +R HP   +IY K+++++  +K+ GY  
Sbjct: 473 RARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKA 532

Query: 721 DMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYIS 780
                LH+VEE  K+  L +HSEKLA+ FG++ LP GAPIRI KNLR+CGDCH+ MK  S
Sbjct: 533 KTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLAS 592

Query: 781 AVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           ++  R II+RD+NRFHHFK G CSCG++W
Sbjct: 593 SITEREIIVRDTNRFHHFKNGYCSCGEFW 621



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 213/398 (53%), Gaps = 8/398 (2%)

Query: 119 ELFWQMQLEGYRPSQYT-LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
           EL W     G R +  + L ++L+  +       G   H   I+     +      L++M
Sbjct: 36  ELVWV----GIRATHVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNM 91

Query: 178 YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
           Y+KC  +  A  LF   P  ++ V+W TM+  ++QNG   KA+  F  M+ EG   ++FT
Sbjct: 92  YSKCGLVESARKLFDEMP-VRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFT 150

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
             S++ ACAA        Q+HG  L +  ++NV+V +AL+D+YAKCG +  A  + E   
Sbjct: 151 VSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMP 210

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
             ++V+W+SM+ G+ +   ++EAL LF +  A  ++ + FT  S L+  A+   L   K 
Sbjct: 211 ERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQ 270

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           V ++  KTG     FV ++LIDMYAK G ++ A+ VF+ +++K+V+ W ++++G + H  
Sbjct: 271 VQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVR 330

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
             EA+ YF  M+  GICP+ +   S+LSAC+ L ++E G++   + ++    S   +  S
Sbjct: 331 SLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYS 390

Query: 478 -LVLVYAKCGCINDANRVFDSMHTRDVIT-WTALIMGC 513
            +V +  + G +++A    D M      + W +L+  C
Sbjct: 391 CMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASC 428



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 209/387 (54%), Gaps = 9/387 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D  T N ++  Y+  G +  A+KLF+E P ++  +W++++  ++  G   +A  LF QMQ
Sbjct: 81  DTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQ 140

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            EG   S++T+ +V+  C+ K  +   +Q HG+A+KT  D N FV T L+D+YAKC  + 
Sbjct: 141 KEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVK 200

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A  +F+  P+ ++ V W++M+ GY QN    +A+  F   +  G+E NQFT  S L+AC
Sbjct: 201 DANLVFECMPE-RSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSAC 259

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           AA +A   G QV      +G  +N++V S+LIDMYAKCG ++ A  +    E  N V WN
Sbjct: 260 AARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWN 319

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +++ GF+R     EA+  F+KM    I  +D TY SVL+  +    +   +    L+++ 
Sbjct: 320 AILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRV 379

Query: 366 GFEGYKFVN-NALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALK 423
                  ++ + ++D+  + G L  A    + M  D     W SL+  C  + + E  L 
Sbjct: 380 HNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLE--LA 437

Query: 424 YFSDMRISGICP----DHVVVSSILSA 446
             +   +  I P    +HV++S+I +A
Sbjct: 438 EVAAKHLFEIEPHNAGNHVLLSNIYAA 464



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 125/247 (50%), Gaps = 3/247 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D + F    ++  YA  G +++A  +F   P ++  TWSS++ GY    L  EA  LF +
Sbjct: 180 DSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHR 239

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
            Q  G   +Q+T+ + L  C+ +  L  G+Q    + KT    N FV++ L+DMYAKC  
Sbjct: 240 AQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGI 299

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I EA  +F    + KN V W  +++G+S++    +A+  F  M+  G+  N  T+ S+L+
Sbjct: 300 IEEAYTVFSSVEE-KNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLS 358

Query: 244 ACAAVSARDFGAQVHGCILS-SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           AC+ +   + G +    ++       NV   S ++D+  + G L  A+  ++    D   
Sbjct: 359 ACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATA 418

Query: 303 S-WNSMI 308
           S W S++
Sbjct: 419 SMWGSLL 425


>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 678

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 236/620 (38%), Positives = 346/620 (55%)

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +F   P   N   + TMI G         A+  +  M    +  + FTF  +L ACA ++
Sbjct: 59  VFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLN 118

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
               G  +H  +  +GF+ +V+V++ ++  Y+KCG L  A ++ +   + N VSW  MI 
Sbjct: 119 LFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMIC 178

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           G    G  +EA+ LF+ +    ++ D F    VL   A   DL + + +   + + G   
Sbjct: 179 GCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSR 238

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
             FV  +L+DMY K G+++ A  VF+ M +KD++ W+++I G A +G   EA++ F +MR
Sbjct: 239 NVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMR 298

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
              + PD   +   LS+CA L  LE G     +       S+  +  SL+  YAKCG + 
Sbjct: 299 KVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSME 358

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
           +A  V+  M  +D + + A+I G A  G+   A   + QM   G  P+  TFVGLL  C+
Sbjct: 359 EALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCT 418

Query: 550 HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
           HAGL ++ R YF SM   + + P  +HY CM+DLL R+G L EA  L+  M  + +  VW
Sbjct: 419 HAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVW 478

Query: 610 KALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
            +LL  CR+H + +L E     L ELEP N+  YV LSN+YS + +W++A ++R  +  +
Sbjct: 479 GSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEK 538

Query: 670 GIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNV 729
           G++K PG SWVE +  VH F+  D  HPL   IY K++ +   +KEAGY P   F L +V
Sbjct: 539 GMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGYNPTTEFVLFDV 598

Query: 730 EEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIIL 789
           EEE KE  L  HSEKLAVAF L++      IR+ KNLRVCGDCH A+K+IS V  R I++
Sbjct: 599 EEEEKEHFLGCHSEKLAVAFALISTGAKYVIRVVKNLRVCGDCHEAIKHISKVTGREIVI 658

Query: 790 RDSNRFHHFKAGNCSCGDYW 809
           RD+NRFH F  G CSC DYW
Sbjct: 659 RDNNRFHCFSDGACSCRDYW 678



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 219/447 (48%), Gaps = 8/447 (1%)

Query: 89  LFNETPFK-NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKG 147
           +F++TP   N F ++++I G  +      A  L+  M      P  +T   VL+ C+   
Sbjct: 59  VFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLN 118

Query: 148 LLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG--KNHVAWTT 205
           L   G   H    KT FD + FV T +V  Y+KC  + +A   +K+F D   KN V+WT 
Sbjct: 119 LFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDA---WKVFDDMVVKNVVSWTG 175

Query: 206 MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
           MI G  + G   +A++ FR +   G+  + F    +L ACA +   + G  +  C+   G
Sbjct: 176 MICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECG 235

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
              NV+V ++L+DMY KCG ++ AR + +     + V W++MI G+A  G  +EA+ LF 
Sbjct: 236 LSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFF 295

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           +M   +++ D +     L+  AS   L        L+    F     +  +LID YAK G
Sbjct: 296 EMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCG 355

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
           +++ A  V+ +M++KD + + ++I+G A +G    A   F  M   GI P+      +L 
Sbjct: 356 SMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLC 415

Query: 446 ACAELTVLEFGQQ-VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DV 503
            C    +++ G+   +++        ++     +V + A+ G +++A+ +   M  + +V
Sbjct: 416 GCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANV 475

Query: 504 ITWTALIMGCAQNGKGKEALQFYDQML 530
           I W +L+ GC  + + + A     Q++
Sbjct: 476 IVWGSLLGGCRLHRETQLAEHVLKQLI 502



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 180/366 (49%), Gaps = 15/366 (4%)

Query: 58  LFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEA 117
           +F+   D D F    ++  Y+  G LR+A K+F++   KN  +W+ +I G   +G   EA
Sbjct: 130 VFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREA 189

Query: 118 FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
            +LF  +   G RP  + +  VLR C+  G L+ G        +     N FV T LVDM
Sbjct: 190 VDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDM 249

Query: 178 YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
           Y KC  + EA ++F    + K+ V W+ MI GY+ NG   +AIE F +MR   V  + + 
Sbjct: 250 YTKCGSMEEARFVFDGMVE-KDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYA 308

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
               L++CA++ A + G    G +    F +N  + ++LID YAKCG ++ A  + +  +
Sbjct: 309 MVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMK 368

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN---- 353
             + V +N++I G A  G    A  +F +M    I  ++ T+  +L C  ++  L     
Sbjct: 369 EKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLL-CGCTHAGLVDDGR 427

Query: 354 ---NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLI 409
              N+ S H   V    E Y      ++D+ A+ G LD A  +   M  K +VI W SL+
Sbjct: 428 HYFNSMS-HDFSVTPTIEHY----GCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLL 482

Query: 410 TGCAYH 415
            GC  H
Sbjct: 483 GGCRLH 488



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 150/318 (47%), Gaps = 15/318 (4%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           R+ F   +++  Y   G + EA+ +F+    K+   WS++I GY++ GL  EA ELF++M
Sbjct: 238 RNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEM 297

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
           +    RP  Y +   L  C+  G L+ G    G      F  N  + T L+D YAKC  +
Sbjct: 298 RKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSM 357

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            EA  ++KM  + K+ V +  +I+G +  G    A   F  M   G+  N+ TF  +L  
Sbjct: 358 EEALGVYKMMKE-KDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCG 416

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQ--SALIDMYAKCGDLDSARRLLEYSEID-NE 301
           C      D G       +S  F     ++    ++D+ A+ G LD A  L++   +  N 
Sbjct: 417 CTHAGLVDDGRHYFNS-MSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANV 475

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT---YPSVLNCFASNIDLNNAKSV 358
           + W S++ G      H+E   L + +  + I+++ +    Y  + N ++++   + A+ +
Sbjct: 476 IVWGSLLGGCR---LHRET-QLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKI 531

Query: 359 HSLIVKTGFE---GYKFV 373
            S + + G +   GY +V
Sbjct: 532 RSTVNEKGMQKLPGYSWV 549


>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
          Length = 787

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 245/663 (36%), Positives = 377/663 (56%), Gaps = 13/663 (1%)

Query: 152 GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYS 211
               HG ++   +  + FV + L  +Y K     +A  +F   P   + + W T++ G  
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPS-PDTILWNTLLAGLP 191

Query: 212 QNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV 270
               G +A+E F  M   G V  +  T  S L A A  S    G  VHG  +  G   + 
Sbjct: 192 ----GSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHE 247

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
           +V + L+ +Y+KCGD+DSA+ L +  +  + V++N++I G++  G  + ++ LFK++ A 
Sbjct: 248 HVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTAS 307

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
             + +  T  +V+  ++       A+ +H+ +VK   +    V+ AL  +Y +  +++ A
Sbjct: 308 GWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESA 367

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
             +F+ M +K + SW ++I+G A +G  E A+  F  M+   + P+ + +SS LSACA L
Sbjct: 368 RSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHL 427

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
             L  G+ VH +  K     ++ V  +L+ +YAKCG I +A  +FD M  ++V++W A+I
Sbjct: 428 GALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMI 487

Query: 511 MGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGI 570
            G   +G+G EAL+ Y  ML     P   TF+ +++ACSH GL +  +  F  M   Y I
Sbjct: 488 SGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRI 547

Query: 571 KPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT----VWKALLSACRVHGDLELGE 626
            PG +H  CM+DLLGR+GKL EA  L+ +    P +     VW ALL AC VH + +L +
Sbjct: 548 TPGIEHCTCMVDLLGRAGKLNEALELISEF---PQSAIGPGVWGALLGACMVHKNSDLAK 604

Query: 627 RAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQV 686
            A+  LFEL+  NA  YV LSN+Y++   + +AA VR+  K+R + K PGC+ +E   + 
Sbjct: 605 LASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRP 664

Query: 687 HIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLA 746
           H+F++ D  HP    IYS ++ +   + EAGY P    AL++VEEE KE  +  HSEKLA
Sbjct: 665 HVFMAGDHLHPQSEAIYSYLERLTAKMIEAGYQPVTEAALYDVEEEEKEHMVKVHSEKLA 724

Query: 747 VAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCG 806
           +AFGLL+   G  IRI KNLRVC DCH A K+IS V  R I++RD++RFHHF+ G CSCG
Sbjct: 725 IAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCG 784

Query: 807 DYW 809
           DYW
Sbjct: 785 DYW 787



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/399 (30%), Positives = 204/399 (51%), Gaps = 6/399 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  + +   Y    R  +A+K+F+  P  +   W++L+ G        EA E F +M 
Sbjct: 148 DTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPGS----EALEAFVRMV 203

Query: 126 LEG-YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
             G  RP   TL + LR  +    +  G   HGY +K     +  VVTGL+ +Y+KC  +
Sbjct: 204 DAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDM 263

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
             A++LF    D  + VA+  +I+GYS NG    ++E F+++   G   N  T  +++  
Sbjct: 264 DSAQFLFDRM-DNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPV 322

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
            +          +H  ++ +  +A+  V +AL  +Y +  D++SAR + +        SW
Sbjct: 323 YSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESW 382

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N+MI G+A+ G  + A++LF+ M   +++ +  T  S L+  A    L+  K VH +I K
Sbjct: 383 NAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISK 442

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
              E   +V  ALIDMYAK G++  A  +F+ M +K+V+SW ++I+G   HG   EALK 
Sbjct: 443 EKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKL 502

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVF 463
           + DM  + I P      S++ AC+   +++ GQ+V  V 
Sbjct: 503 YKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVM 541



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 167/350 (47%), Gaps = 12/350 (3%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +++ Y+  G +  A+ LF+     +   +++LI GYS  G+   + ELF ++   G+RP+
Sbjct: 253 LMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPN 312

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
             TL  V+ + S  G        H + +K   D +A V T L  +Y +   +  A  +F 
Sbjct: 313 SSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFD 372

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
              + K   +W  MI+GY+QNG    A+  F+ M+   V+ N  T  S L+ACA + A  
Sbjct: 373 AMLE-KTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALS 431

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G  VH  I     E NVYV +ALIDMYAKCG +  AR + +  +  N VSWN+MI G+ 
Sbjct: 432 LGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYG 491

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI-----VKTGF 367
             G   EAL L+K M    I     T+ SV+   +    ++  + V  ++     +  G 
Sbjct: 492 LHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGI 551

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS--WTSLITGCAYH 415
           E        ++D+  + G L+ A  + +      +    W +L+  C  H
Sbjct: 552 EHC----TCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVH 597



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 4/232 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D      +   Y     +  A+ +F+    K   +W+++I GY+  GL   A  LF  
Sbjct: 345 DADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQL 404

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           MQ    +P+  T+ + L  C+  G L  G+  H    K   +LN +V+T L+DMYAKC  
Sbjct: 405 MQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGS 464

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I EA  +F    D KN V+W  MI+GY  +G G +A++ ++DM    +     TF S++ 
Sbjct: 465 IAEARSIFDRM-DNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIY 523

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQ--SALIDMYAKCGDLDSARRLL 293
           AC+     D G +V   ++++ +     ++  + ++D+  + G L+ A  L+
Sbjct: 524 ACSHGGLVDEGQKVFR-VMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELI 574



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 162/363 (44%), Gaps = 53/363 (14%)

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           D   A+++H L V  G+    FV +AL  +Y K    D A  VF+ +   D I W +L+ 
Sbjct: 129 DAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLA 188

Query: 411 GCAYHGSYEEALKYFSDMRISG-ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
           G    GS  EAL+ F  M  +G + PD   ++S L A AE + +  G+ VH   +K G  
Sbjct: 189 GLP--GS--EALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLA 244

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
               V   L+ +Y+KCG ++ A  +FD M   D++ + ALI G + NG  + +++ + ++
Sbjct: 245 EHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKEL 304

Query: 530 LARGTKPDYITFVG-----------LLFACSHAGLA------------------------ 554
            A G +P+  T V            LL  C HA +                         
Sbjct: 305 TASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDM 364

Query: 555 ENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE----PDATVWK 610
           E+AR  F++M     ++   + +  MI    ++G L E    L Q++ E    P+     
Sbjct: 365 ESARSIFDAM-----LEKTMESWNAMISGYAQNG-LTEMAVALFQLMQELNVQPNPITIS 418

Query: 611 ALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ--LSNMYSTAGKWEDAARVRKLMKS 668
           + LSAC   G L LG +  + +   E +    YV   L +MY+  G   +A  +   M +
Sbjct: 419 STLSACAHLGALSLG-KWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDN 477

Query: 669 RGI 671
           + +
Sbjct: 478 KNV 480



 Score = 46.6 bits (109), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 6/94 (6%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF- 99
           AL+D ++  G I EA  +F++M +++  +WN MI+ Y   G+  EA KL+ +        
Sbjct: 454 ALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILP 513

Query: 100 ---TWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
              T+ S+IY  S+ GL  E  ++F  M  E YR
Sbjct: 514 TSSTFLSVIYACSHGGLVDEGQKVFRVMTNE-YR 546


>gi|357168001|ref|XP_003581434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Brachypodium distachyon]
          Length = 757

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 233/684 (34%), Positives = 388/684 (56%), Gaps = 5/684 (0%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           R+    N +I  Y        A+ +F+E P KN  +W+S+I  ++      +A  LF  M
Sbjct: 74  RNTVLNNHLITMYGRCAAPESARLVFDEMPAKNPVSWASVIAAHAQNRRSTDALGLFSSM 133

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
              G  P Q+ L + +R C+  G +  G Q H  A+K+    +  V   LV MY+K   +
Sbjct: 134 LRSGTAPDQFALGSTVRACAELGDIGVGRQVHAQAMKSENGSDLIVQNALVTMYSKSGLV 193

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE-SNQFTFPSILT 243
            +   LF    + K+ ++W ++I G++Q G   +A++ FR+M  EG+   N+F F S+ +
Sbjct: 194 ADGFLLFGRMRE-KDPISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGSVFS 252

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           AC  + + ++G Q+H   +    + N Y   +L DMYA+C  L+SA+R+    +  + VS
Sbjct: 253 ACGVLGSLEYGEQIHSLSVKYRLDHNSYAGCSLSDMYARCKKLESAKRVFYGIDAPDLVS 312

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WNS+I   + +G   EA+ L  +M    ++ D  T   +L        + + + +HS +V
Sbjct: 313 WNSIINACSVEGLLSEAMVLLSEMRGSGLRPDGITVRGLLCACVGCDAIQHGRLMHSYLV 372

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K G +G   V N+L+ MYA+  +   A  VF+  +D+DV++W S++T C  H   E   K
Sbjct: 373 KLGLDGDVSVCNSLLSMYARCMDFSSAMDVFHETRDRDVVTWNSILTACVQHQHLEVVFK 432

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            F+ ++ S    D + ++++LSA AEL   E  +QVH    K G  +   + N L+  YA
Sbjct: 433 LFNLLQRSLPSLDRISLNNVLSASAELGYFEMVKQVHTCTFKVGLVNDTMLSNGLIDTYA 492

Query: 484 KCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
           KCG ++DA ++F+ M T  DV +W++LI+G AQ+G  ++AL  + +M   G +P+++TFV
Sbjct: 493 KCGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQSGYPRKALDLFARMRNLGVRPNHVTFV 552

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
           G+L ACS  GL +   +Y+  M+  +G+ P  +H +C+IDLL R+G+L EA   +DQM  
Sbjct: 553 GVLTACSRVGLVDEGCYYYSIMEPEHGVLPTREHCSCVIDLLARAGRLTEAAKFVDQMPF 612

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
           EPD  +WK LL+  + H D+E+G RAA  +  ++P ++  YV L N+YS +G W + AR+
Sbjct: 613 EPDIVMWKTLLAGSKTHNDVEMGRRAAEGILNIDPSHSAAYVLLCNIYSASGDWNEFARL 672

Query: 663 RKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDM 722
           +K M+S G++K PG SWV+   ++ +FI EDR HP   +IY+ ++ + + + +AGYVP +
Sbjct: 673 KKAMRSSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYTMLELVGMEMIKAGYVPKL 732

Query: 723 NFALHNVEEEGKEIGLAYHSEKLA 746
           +    + +  G   GL+   E LA
Sbjct: 733 SCNHASFDLTGN--GLSDEEETLA 754



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 138/500 (27%), Positives = 233/500 (46%), Gaps = 39/500 (7%)

Query: 20  IGPARYTHNVGNSVKPASDL---NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAA 76
           IG  R  H      +  SDL   N  +  +S SG + +   LF +M ++D  +W ++IA 
Sbjct: 158 IGVGRQVHAQAMKSENGSDLIVQNALVTMYSKSGLVADGFLLFGRMREKDPISWGSIIAG 217

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYT 135
           +A                                 G ++EA ++F +M  EG + P+++ 
Sbjct: 218 FAQQ-------------------------------GCEMEALQIFREMVAEGMHHPNEFH 246

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
             +V   C + G L+ GEQ H  ++K   D N++    L DMYA+CK +  A+ +F    
Sbjct: 247 FGSVFSACGVLGSLEYGEQIHSLSVKYRLDHNSYAGCSLSDMYARCKKLESAKRVFYGI- 305

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGA 255
           D  + V+W ++I   S  G   +A+    +MR  G+  +  T   +L AC    A   G 
Sbjct: 306 DAPDLVSWNSIINACSVEGLLSEAMVLLSEMRGSGLRPDGITVRGLLCACVGCDAIQHGR 365

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
            +H  ++  G + +V V ++L+ MYA+C D  SA  +   +   + V+WNS++    +  
Sbjct: 366 LMHSYLVKLGLDGDVSVCNSLLSMYARCMDFSSAMDVFHETRDRDVVTWNSILTACVQHQ 425

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
             +    LF  +      +D  +  +VL+  A        K VH+   K G      ++N
Sbjct: 426 HLEVVFKLFNLLQRSLPSLDRISLNNVLSASAELGYFEMVKQVHTCTFKVGLVNDTMLSN 485

Query: 376 ALIDMYAKQGNLDCAFMVFNLM-QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
            LID YAK G+LD A  +F +M  + DV SW+SLI G A  G   +AL  F+ MR  G+ 
Sbjct: 486 GLIDTYAKCGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQSGYPRKALDLFARMRNLGVR 545

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL-VYAKCGCINDANR 493
           P+HV    +L+AC+ + +++ G   +++     G        S V+ + A+ G + +A +
Sbjct: 546 PNHVTFVGVLTACSRVGLVDEGCYYYSIMEPEHGVLPTREHCSCVIDLLARAGRLTEAAK 605

Query: 494 VFDSMH-TRDVITWTALIMG 512
             D M    D++ W  L+ G
Sbjct: 606 FVDQMPFEPDIVMWKTLLAG 625



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 199/418 (47%), Gaps = 14/418 (3%)

Query: 245 CAAVSARDFGAQVHGCILSS---GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           C+ + A   G  VH  +L+S       N  + + LI MY +C   +SAR + +     N 
Sbjct: 48  CSRLRALCLGCLVHRHLLASPDPNLVRNTVLNNHLITMYGRCAAPESARLVFDEMPAKNP 107

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           VSW S+I   A+     +AL LF  M       D F   S +   A   D+   + VH+ 
Sbjct: 108 VSWASVIAAHAQNRRSTDALGLFSSMLRSGTAPDQFALGSTVRACAELGDIGVGRQVHAQ 167

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
            +K+       V NAL+ MY+K G +   F++F  M++KD ISW S+I G A  G   EA
Sbjct: 168 AMKSENGSDLIVQNALVTMYSKSGLVADGFLLFGRMREKDPISWGSIIAGFAQQGCEMEA 227

Query: 422 LKYFSDMRISGI-CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
           L+ F +M   G+  P+     S+ SAC  L  LE+G+Q+H++ +K     +     SL  
Sbjct: 228 LQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHSLSVKYRLDHNSYAGCSLSD 287

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           +YA+C  +  A RVF  +   D+++W ++I  C+  G   EA+    +M   G +PD IT
Sbjct: 288 MYARCKKLESAKRVFYGIDAPDLVSWNSIINACSVEGLLSEAMVLLSEMRGSGLRPDGIT 347

Query: 541 FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMID-LLGRSGKLIEAKALLD- 598
             GLL AC      ++ R         Y +K G D    + + LL    + ++  + +D 
Sbjct: 348 VRGLLCACVGCDAIQHGRLMHS-----YLVKLGLDGDVSVCNSLLSMYARCMDFSSAMDV 402

Query: 599 -QMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
                + D   W ++L+AC  H  LE+  +  N L    P  ++  + L+N+ S + +
Sbjct: 403 FHETRDRDVVTWNSILTACVQHQHLEVVFKLFNLLQRSLP--SLDRISLNNVLSASAE 458



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 173/360 (48%), Gaps = 6/360 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D + +   ++   YA   +L  AK++F      +  +W+S+I   S  GL  EA  L  +
Sbjct: 276 DHNSYAGCSLSDMYARCKKLESAKRVFYGIDAPDLVSWNSIINACSVEGLLSEAMVLLSE 335

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+  G RP   T+  +L  C     +Q G   H Y +K   D +  V   L+ MYA+C  
Sbjct: 336 MRGSGLRPDGITVRGLLCACVGCDAIQHGRLMHSYLVKLGLDGDVSVCNSLLSMYARCMD 395

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
              A  +F    D ++ V W +++T   Q+ +     + F  ++      ++ +  ++L+
Sbjct: 396 FSSAMDVFHETRD-RDVVTWNSILTACVQHQHLEVVFKLFNLLQRSLPSLDRISLNNVLS 454

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV- 302
           A A +   +   QVH C    G   +  + + LID YAKCG LD A +L E    +++V 
Sbjct: 455 ASAELGYFEMVKQVHTCTFKVGLVNDTMLSNGLIDTYAKCGSLDDAVKLFEMMGTNSDVF 514

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SW+S+IVG+A+ G+ ++AL LF +M    ++ +  T+  VL    S + L +    +  I
Sbjct: 515 SWSSLIVGYAQSGYPRKALDLFARMRNLGVRPNHVTFVGVLTA-CSRVGLVDEGCYYYSI 573

Query: 363 VKT--GFEGYKFVNNALIDMYAKQGNL-DCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
           ++   G    +   + +ID+ A+ G L + A  V  +  + D++ W +L+ G   H   E
Sbjct: 574 MEPEHGVLPTREHCSCVIDLLARAGRLTEAAKFVDQMPFEPDIVMWKTLLAGSKTHNDVE 633


>gi|41469322|gb|AAS07178.1| putative pentatricopeptide repeat containing protein [Oryza sativa
           Japonica Group]
 gi|108709518|gb|ABF97313.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 654

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 228/570 (40%), Positives = 339/570 (59%), Gaps = 9/570 (1%)

Query: 249 SARDFGAQVHGCILSSGF---EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           S+   GAQ+H   +  GF   + +  + +A++  YA C + D AR++ +     N V+WN
Sbjct: 85  SSLGLGAQLHAQAVVRGFLGGDDSTILATAVLSFYASCREPDLARKVFDGMPRRNAVTWN 144

Query: 306 SMIVGFARQGFHKEALSLFKKM--HARDIKIDDFTYPSVLNCFA----SNIDLNNAKSVH 359
           ++I G+A+ G  +EA+ LF+ M      +  D +T+P++L+       S   L    ++H
Sbjct: 145 ALIKGYAQAGRREEAILLFRDMKREGSHVAPDRYTFPALLSGIGREGGSGRTLELGGALH 204

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
           + ++K G E   FV  +L+ +YA +  L+ A + F+ +   D I W+S+I+        E
Sbjct: 205 AHVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGSSDPIVWSSMISAYVNCEEEE 264

Query: 420 EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
            AL  F +M    I P   V S++ S C  + +LE G+QVHA  LKS      ++ N+L+
Sbjct: 265 GALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMGKQVHAHSLKSNTEKDAAMFNALL 324

Query: 480 LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
            +Y+ CGCINDA +VF S    +VI++ ++I    Q+G  KEAL+ + QM   G  PD +
Sbjct: 325 TMYSDCGCINDAQKVFSSNDCVNVISYNSMISALGQHGYPKEALEHFRQMKFAGLMPDEV 384

Query: 540 TFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ 599
           T + L+ + +HAGL       F SM  + GIKP   HYAC++D+L RSG++ +A   +++
Sbjct: 385 TLLNLISSFNHAGLVHEGLQMFNSMVDIEGIKPMYQHYACVVDMLARSGEIGKAMKTINE 444

Query: 600 MVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDA 659
           M  E +A +W+ +L AC  H D+E G+R A  LFE+EP  A  Y+ L N+Y+  G+W +A
Sbjct: 445 MPFEAEAPLWRIVLGACSKHRDIETGKRIAEMLFEMEPYEATNYILLGNIYARLGRWTEA 504

Query: 660 ARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYV 719
            +VR LM  RG+ K+   SW+E   + + F  +DR HP+  +IY  +D ++  IK AGYV
Sbjct: 505 EKVRSLMGERGVYKDDAFSWIEMGQRTYRFGVDDRSHPISREIYRNLDRLISTIKVAGYV 564

Query: 720 PDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYI 779
           PD++FA HN++ + KE  L YH EKLA AFG L  P G  +RI KNLRVCGDCH A KY 
Sbjct: 565 PDISFAAHNIQRDRKEESLYYHCEKLAFAFGDLAAPSGGTLRIMKNLRVCGDCHCAYKYF 624

Query: 780 SAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           S V  R IILRD+ RFHHF +G CSCGDYW
Sbjct: 625 SLVTGREIILRDNQRFHHFNSGFCSCGDYW 654



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 173/363 (47%), Gaps = 21/363 (5%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
             +++ YA+      A+K+F+  P +N  TW++LI GY+  G   EA  LF  M+ EG  
Sbjct: 113 TAVLSFYASCREPDLARKVFDGMPRRNAVTWNALIKGYAQAGRREEAILLFRDMKREGSH 172

Query: 131 --PSQYTLDNVLRLCSLKG----LLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
             P +YT   +L     +G     L+ G   H + IK   + + FV   LV +YA  + +
Sbjct: 173 VAPDRYTFPALLSGIGREGGSGRTLELGGALHAHVIKAGLERDPFVGASLVSLYAARRTL 232

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            +A+  F       + + W++MI+ Y        A+  F +M  + ++  QF + ++ + 
Sbjct: 233 EDAKVAFDQV-GSSDPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSV 291

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C  +   + G QVH   L S  E +  + +AL+ MY+ CG ++ A+++   ++  N +S+
Sbjct: 292 CGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISY 351

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH----- 359
           NSMI    + G+ KEAL  F++M    +  D+ T  ++++ F      N+A  VH     
Sbjct: 352 NSMISALGQHGYPKEALEHFRQMKFAGLMPDEVTLLNLISSF------NHAGLVHEGLQM 405

Query: 360 --SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHG 416
             S++   G +        ++DM A+ G +  A    N M  + +   W  ++  C+ H 
Sbjct: 406 FNSMVDIEGIKPMYQHYACVVDMLARSGEIGKAMKTINEMPFEAEAPLWRIVLGACSKHR 465

Query: 417 SYE 419
             E
Sbjct: 466 DIE 468



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 127/248 (51%), Gaps = 2/248 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           +RD F   ++++ YA    L +AK  F++    +   WSS+I  Y N   +  A  +F+ 
Sbjct: 213 ERDPFVGASLVSLYAARRTLEDAKVAFDQVGSSDPIVWSSMISAYVNCEEEEGALLIFFN 272

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M  +  +P+Q+    V  +C   G+L+ G+Q H +++K+  + +A +   L+ MY+ C C
Sbjct: 273 MLCQDIKPTQFVYSTVFSVCGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLTMYSDCGC 332

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I +A+ +F    D  N +++ +MI+   Q+GY  +A+E FR M+  G+  ++ T  ++++
Sbjct: 333 INDAQKVFSS-NDCVNVISYNSMISALGQHGYPKEALEHFRQMKFAGLMPDEVTLLNLIS 391

Query: 244 ACAAVSARDFGAQVHGCILS-SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           +         G Q+   ++   G +      + ++DM A+ G++  A + +     + E 
Sbjct: 392 SFNHAGLVHEGLQMFNSMVDIEGIKPMYQHYACVVDMLARSGEIGKAMKTINEMPFEAEA 451

Query: 303 SWNSMIVG 310
               +++G
Sbjct: 452 PLWRIVLG 459



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 11/125 (8%)

Query: 63  SDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFW 122
           +++D   +N ++  Y++ G + +A+K+F+     N  +++S+I     +G   EA E F 
Sbjct: 313 TEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISYNSMISALGQHGYPKEALEHFR 372

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV-VTGLVDMYAKC 181
           QM+  G  P + TL N++   +  GL+  G Q            N+ V + G+  MY   
Sbjct: 373 QMKFAGLMPDEVTLLNLISSFNHAGLVHEGLQM----------FNSMVDIEGIKPMYQHY 422

Query: 182 KCIFE 186
            C+ +
Sbjct: 423 ACVVD 427



 Score = 43.5 bits (101), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 6/118 (5%)

Query: 20  IGPARYTHNV-GNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYA 78
           +G   + H++  N+ K A+  N  L  +S+ G I++A ++F      +  ++N+MI+A  
Sbjct: 300 MGKQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISYNSMISALG 359

Query: 79  NSGRLREAKKLFNETPFKNFF----TWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRP 131
             G  +EA + F +  F        T  +LI  +++ GL  E  ++F  M  +EG +P
Sbjct: 360 QHGYPKEALEHFRQMKFAGLMPDEVTLLNLISSFNHAGLVHEGLQMFNSMVDIEGIKP 417


>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
 gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
 gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
          Length = 665

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 255/640 (39%), Positives = 375/640 (58%), Gaps = 41/640 (6%)

Query: 211 SQNGYGFK-AIECFRDMRVEGVESNQFTFPSIL-----TACAAVSARDFGAQVHGCILSS 264
           S +G+G + A+  +  M   G   + +TFPS+L        AAV+A   G  +H  ++  
Sbjct: 26  SVSGHGAEEAVAGYVRMLAGGARPDAYTFPSLLKAAAAARGAAVAAASVGGAIHAHVVKF 85

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN----EVSWNSMIVGFARQGFHKEA 320
           G E+N +  S+LI MYA  GD  +AR +LE + +       V WN++I G  R G  + +
Sbjct: 86  GMESNAHAASSLIVMYAARGDGAAARAVLEAACLATGGGAPVMWNALISGHNRSGRFELS 145

Query: 321 LSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDM 380
              F  M          TY SVL+      DL     VH  ++++G    + V NAL+DM
Sbjct: 146 CCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQRVENALVDM 205

Query: 381 YAKQGNLDCAFMVFNLMQ-------------------------------DKDVISWTSLI 409
           YA+ G++D A+++F  MQ                               ++D I+WT++I
Sbjct: 206 YAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMI 265

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
            G    G + +AL+ F  M+I  +  D   + S+++ACA+L  LE G+       + G  
Sbjct: 266 DGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETGEWARIYMGRLGIK 325

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
             + V N+L+ +Y+KCG I  A  VF  MH RD  TWTA+I+G A NG+G+EA+  + +M
Sbjct: 326 MDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRM 385

Query: 530 LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGK 589
           L     PD +TFVG+L AC+HAGL +  R +F SM + Y I P   HY C+ID+LGR+GK
Sbjct: 386 LRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGK 445

Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNM 649
           L EA   +D+M  +P++T+W  LL++CRV+G+ E+GE AA  L EL+P N+  Y+ LSNM
Sbjct: 446 LKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAERLLELDPDNSTAYILLSNM 505

Query: 650 YSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEI 709
           Y+ + +W+D  R+R+++  +GI+KEPGCS +E N  +H F++ DR HP+  +IYSK++ +
Sbjct: 506 YAKSNRWKDVRRIRQIIMEKGIKKEPGCSMIEMNGIIHEFVAADRSHPMNKEIYSKLENV 565

Query: 710 MLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVC 769
           +  ++ AGYVPD+   L  V EE K+  L +HSEKLAV F LLT      IRI KNLR+C
Sbjct: 566 LTDLRNAGYVPDVTEVLVEVTEEEKQKVLYWHSEKLAVTFALLTSESNVIIRIVKNLRMC 625

Query: 770 GDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            DCH A+K IS +Y R +I+RD  RFHHF+ G+CSC DYW
Sbjct: 626 LDCHNAIKLISKLYGREVIVRDRTRFHHFRHGSCSCKDYW 665



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 206/479 (43%), Gaps = 45/479 (9%)

Query: 83  LREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRL 142
           L  A+ L +  P +     SS + G+       EA   + +M   G RP  YT  ++L+ 
Sbjct: 5   LSRARSLLDGIPHRRGRAASSSVSGHGAE----EAVAGYVRMLAGGARPDAYTFPSLLKA 60

Query: 143 CSLKGLLQRGEQ-----FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK---MF 194
            +                H + +K   + NA   + L+ MYA       A  + +   + 
Sbjct: 61  AAAARGAAVAAASVGGAIHAHVVKFGMESNAHAASSLIVMYAARGDGAAARAVLEAACLA 120

Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
             G   V W  +I+G++++G    +   F DM      +   T+ S+L+AC        G
Sbjct: 121 TGGGAPVMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLG 180

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
            QVH  +L SG   +  V++AL+DMYA+CGD+D+A  L E  ++ +  SW S+I G  R 
Sbjct: 181 MQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRS 240

Query: 315 GFHKEALSLFKKMHARD-------------------------------IKIDDFTYPSVL 343
           G    A  LF  M  RD                               ++ D+FT  SV+
Sbjct: 241 GQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVV 300

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVI 403
              A    L   +     + + G +   FV NALIDMY+K G+++ A  VF  M ++D  
Sbjct: 301 TACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKF 360

Query: 404 SWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVF 463
           +WT++I G A +G  EEA+  F  M  +   PD V    +L+AC    +++ G++     
Sbjct: 361 TWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSM 420

Query: 464 LKSGGCSSLSVD-NSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGK 520
            ++   S   V    L+ V  + G + +A    D M  + +   W  L+  C   G  +
Sbjct: 421 TEAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSE 479



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 141/293 (48%), Gaps = 4/293 (1%)

Query: 19  IIGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAY 77
           ++G   +   + + V P   +  ALVD ++  G++D A  LFE M  R   +W ++I+  
Sbjct: 178 LLGMQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGL 237

Query: 78  ANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLD 137
             SG++  A+ LF+  P ++   W+++I GY   G   +A E F  MQ+   R  ++T+ 
Sbjct: 238 VRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMV 297

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           +V+  C+  G L+ GE    Y  +    ++ FV   L+DMY+KC  I  A  +FK   + 
Sbjct: 298 SVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHN- 356

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           ++   WT +I G + NG G +AI+ F  M       ++ TF  +LTAC      D G + 
Sbjct: 357 RDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREF 416

Query: 258 HGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
              +  +      V     LID+  + G L  A   ++   +  N   W +++
Sbjct: 417 FLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLL 469



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 171/393 (43%), Gaps = 66/393 (16%)

Query: 101 WSSLIYGYSNYGLDIEAFEL----FWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
           W++LI G++  G     FEL    F  M       +  T  +VL  C     L  G Q H
Sbjct: 129 WNALISGHNRSG----RFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVH 184

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCK------CIFE------------------------ 186
              +++    +  V   LVDMYA+C        +FE                        
Sbjct: 185 KRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVD 244

Query: 187 -AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A  LF   P+ ++ +AWT MI GY Q G    A+E FR M++  V +++FT  S++TAC
Sbjct: 245 RARDLFDHMPE-RDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTAC 303

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A + A + G      +   G + +V+V +ALIDMY+KCG ++ A  + +     ++ +W 
Sbjct: 304 AQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWT 363

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           ++I+G A  G  +EA+ +F +M       D+ T+  VL               H+ +V  
Sbjct: 364 AIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTA-----------CTHAGLVDK 412

Query: 366 GFEGYKFVNNA------------LIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGC 412
           G E +  +  A            LID+  + G L  A    + M  K +   W +L+  C
Sbjct: 413 GREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASC 472

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
             +G+ E  +   +  R+  + PD+     +LS
Sbjct: 473 RVYGNSE--IGELAAERLLELDPDNSTAYILLS 503


>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Vitis vinifera]
          Length = 594

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 232/569 (40%), Positives = 356/569 (62%)

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           +L + A   A   G   H  I+  G  A+    + L++MY+KCG ++SAR+L +   + +
Sbjct: 26  LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRS 85

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
            VSWN+M+    + G  ++AL LF +M        +FT  SV+   A+   +   K +H 
Sbjct: 86  LVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHG 145

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
             +KT  +   FV  AL+D+YAK G +  A +VF  M ++  ++W+S++ G   +  YEE
Sbjct: 146 FALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEE 205

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
           AL  F   +  G+  +   +SS LSACA    L  G+QV AV  K+G  S++ V +SL+ 
Sbjct: 206 ALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLID 265

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           +YAKCG I +A  VF S+  ++V+ W A++ G +++ +  EA+ ++++M   G  P+ IT
Sbjct: 266 MYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDIT 325

Query: 541 FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
           ++ +L ACSH GL E  R YF+ M +V+ + P   HY+CM+D+LGR+G L EAK  +D+M
Sbjct: 326 YISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRM 385

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAA 660
             +  A++W +LL++CR++ +LEL E AA +LFE+EP NA  +V LSN+Y+   +WE+ A
Sbjct: 386 PFDATASMWGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVA 445

Query: 661 RVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
           R R L+K    +KE G SW+E   +VH F+  +R HP   +IY K+++++  +K+ GY  
Sbjct: 446 RARNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKA 505

Query: 721 DMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYIS 780
                LH+VEE  K+  L +HSEKLA+ FG++ LP GAPIRI KNLR+CGDCH+ MK  S
Sbjct: 506 KTEHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLAS 565

Query: 781 AVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           ++  R II+RD+NRFHHFK G CSCG++W
Sbjct: 566 SITEREIIVRDTNRFHHFKNGYCSCGEFW 594



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 213/398 (53%), Gaps = 8/398 (2%)

Query: 119 ELFWQMQLEGYRPSQYT-LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
           EL W     G R +  + L ++L+  +       G   H   I+     +      L++M
Sbjct: 9   ELVWV----GIRATHVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNM 64

Query: 178 YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
           Y+KC  +  A  LF   P  ++ V+W TM+  ++QNG   KA+  F  M+ EG   ++FT
Sbjct: 65  YSKCGLVESARKLFDEMP-VRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFT 123

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
             S++ ACAA        Q+HG  L +  ++NV+V +AL+D+YAKCG +  A  + E   
Sbjct: 124 VSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMP 183

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
             ++V+W+SM+ G+ +   ++EAL LF +  A  ++ + FT  S L+  A+   L   K 
Sbjct: 184 ERSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQ 243

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           V ++  KTG     FV ++LIDMYAK G ++ A+ VF+ +++K+V+ W ++++G + H  
Sbjct: 244 VQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVR 303

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
             EA+ YF  M+  GICP+ +   S+LSAC+ L ++E G++   + ++    S   +  S
Sbjct: 304 SLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYS 363

Query: 478 -LVLVYAKCGCINDANRVFDSMHTRDVIT-WTALIMGC 513
            +V +  + G +++A    D M      + W +L+  C
Sbjct: 364 CMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASC 401



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 209/387 (54%), Gaps = 9/387 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D  T N ++  Y+  G +  A+KLF+E P ++  +W++++  ++  G   +A  LF QMQ
Sbjct: 54  DTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQ 113

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            EG   S++T+ +V+  C+ K  +   +Q HG+A+KT  D N FV T L+D+YAKC  + 
Sbjct: 114 KEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVK 173

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A  +F+  P+ ++ V W++M+ GY QN    +A+  F   +  G+E NQFT  S L+AC
Sbjct: 174 DANLVFECMPE-RSDVTWSSMVAGYVQNELYEEALVLFHRAQAMGLEHNQFTISSALSAC 232

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           AA +A   G QV      +G  +N++V S+LIDMYAKCG ++ A  +    E  N V WN
Sbjct: 233 AARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWN 292

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +++ GF+R     EA+  F+KM    I  +D TY SVL+  +    +   +    L+++ 
Sbjct: 293 AILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRV 352

Query: 366 GFEGYKFVN-NALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALK 423
                  ++ + ++D+  + G L  A    + M  D     W SL+  C  + + E  L 
Sbjct: 353 HNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLE--LA 410

Query: 424 YFSDMRISGICP----DHVVVSSILSA 446
             +   +  I P    +HV++S+I +A
Sbjct: 411 EVAAKHLFEIEPHNAGNHVLLSNIYAA 437



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 125/247 (50%), Gaps = 3/247 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D + F    ++  YA  G +++A  +F   P ++  TWSS++ GY    L  EA  LF +
Sbjct: 153 DSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHR 212

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
            Q  G   +Q+T+ + L  C+ +  L  G+Q    + KT    N FV++ L+DMYAKC  
Sbjct: 213 AQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGI 272

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I EA  +F    + KN V W  +++G+S++    +A+  F  M+  G+  N  T+ S+L+
Sbjct: 273 IEEAYTVFSSVEE-KNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLS 331

Query: 244 ACAAVSARDFGAQVHGCILS-SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           AC+ +   + G +    ++       NV   S ++D+  + G L  A+  ++    D   
Sbjct: 332 ACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATA 391

Query: 303 S-WNSMI 308
           S W S++
Sbjct: 392 SMWGSLL 398


>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Brachypodium distachyon]
          Length = 631

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 229/590 (38%), Positives = 345/590 (58%), Gaps = 3/590 (0%)

Query: 223 FRDMRVEGVESNQFTFPSI---LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
            +D R+  ++ N     +I   L  CA   +   G   HG  +  G   +    + LI++
Sbjct: 42  LKDRRLARIDRNLIDVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINL 101

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           Y KCG  D AR + +   + + VSWN+MI G+   G   +AL LF +MH     + +FT 
Sbjct: 102 YTKCGRNDCARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTL 161

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
            S +   A+   +N  K +H++ +K   +   FV  A++D+YAK   +  A  VF  M +
Sbjct: 162 SSTICACAAKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPE 221

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           + +++W+SL  G   +G +EEAL  F   +  G+      +S+ILSACA L +   G Q+
Sbjct: 222 RTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQL 281

Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKG 519
           HAV LK G   +  V  SLV VYA+CG I  A  +F  M  ++V+ W A+I   +++   
Sbjct: 282 HAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHS 341

Query: 520 KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC 579
            EA+  +++M   G  P+ +T++ +L  CSHAGL E  R YF  +     ++P   HY+C
Sbjct: 342 WEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSC 401

Query: 580 MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMN 639
           M+D+LGRSGK  EA  LL++M  EP A++W +LL +CR + ++ L   AA  LF+LEP N
Sbjct: 402 MVDVLGRSGKTDEAWELLNKMPFEPTASMWGSLLGSCRNYNNIRLARIAAEQLFQLEPDN 461

Query: 640 AMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLR 699
              +V LSN+Y+ +G WE+    RK +K  G +KE G SW+E   +VH+F+  +R HP  
Sbjct: 462 GGNHVLLSNVYAASGNWENVLMARKYLKDSGAKKEMGRSWIEAKGKVHVFVVGERKHPRI 521

Query: 700 TDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAP 759
           TDIY+K++EI   +++      +   LH+V  E KE  L +HSEKLA++FGL++LP   P
Sbjct: 522 TDIYNKLEEIYHEMRKFARRTSIECDLHDVHAEQKEELLKHHSEKLALSFGLISLPSNIP 581

Query: 760 IRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           I I KNLR+CGDCH+ MK  + +  R +I+RD+NRFHHFK G+CSCGD+W
Sbjct: 582 IIIHKNLRICGDCHSFMKIAAHITERLVIVRDTNRFHHFKDGSCSCGDFW 631



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 213/387 (55%), Gaps = 9/387 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D  T N +I  Y   GR   A+ +F+    ++  +W+++I GY++ G D++A +LF +M 
Sbjct: 91  DTLTCNILINLYTKCGRNDCARLVFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMH 150

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            EG   S++TL + +  C+ K  +   +Q H  A+K   D N+FV T ++D+YAKC  I 
Sbjct: 151 REGTHMSEFTLSSTICACAAKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIK 210

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A ++F+  P+ +  V W+++  GY QNG   +A+  FR  + EGVE  +FT  +IL+AC
Sbjct: 211 DACWVFEKMPE-RTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSAC 269

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A+++ +  G Q+H  IL  GF  N +V ++L+D+YA+CG ++ A  L  Y E  N V WN
Sbjct: 270 ASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWN 329

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK- 364
           +MI  F+R     EA+ LF+KM    I  ++ TY SVL+  +    +   +   SL++  
Sbjct: 330 AMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSD 389

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEALK 423
              E      + ++D+  + G  D A+ + N M  +   S W SL+  C  + +    L 
Sbjct: 390 RTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTASMWGSLLGSCRNYNNIR--LA 447

Query: 424 YFSDMRISGICPD----HVVVSSILSA 446
             +  ++  + PD    HV++S++ +A
Sbjct: 448 RIAAEQLFQLEPDNGGNHVLLSNVYAA 474



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 194/376 (51%), Gaps = 3/376 (0%)

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKN 199
           L+LC+ +  L  G+  HG AI      +      L+++Y KC     A  +F +    ++
Sbjct: 64  LQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIM-HVRS 122

Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG 259
            V+W TMI GY+ +G   +A++ F  M  EG   ++FT  S + ACAA  A +   Q+H 
Sbjct: 123 IVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHT 182

Query: 260 CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKE 319
             L    ++N +V +A++D+YAKC  +  A  + E       V+W+S+  G+ + G H+E
Sbjct: 183 IALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEE 242

Query: 320 ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALID 379
           AL LF+      +++ +FT  ++L+  AS         +H++I+K GF G  FV  +L+D
Sbjct: 243 ALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVD 302

Query: 380 MYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVV 439
           +YA+ G ++ A+ +F  M+ K+V+ W ++I   + H    EA+  F  M+  GI P+ V 
Sbjct: 303 VYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVT 362

Query: 440 VSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LVLVYAKCGCINDANRVFDSM 498
             S+LS C+   ++E G+   ++ +         +  S +V V  + G  ++A  + + M
Sbjct: 363 YLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKM 422

Query: 499 HTRDVIT-WTALIMGC 513
                 + W +L+  C
Sbjct: 423 PFEPTASMWGSLLGSC 438



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 127/263 (48%), Gaps = 7/263 (2%)

Query: 52  IDEAGQL----FEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYG 107
           I+E  QL     +   D + F    ++  YA    +++A  +F + P +   TWSSL  G
Sbjct: 174 INECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAG 233

Query: 108 YSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLN 167
           Y   GL  EA  LF   Q EG   +++TL  +L  C+   L   G Q H   +K  F  N
Sbjct: 234 YVQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGN 293

Query: 168 AFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR 227
            FV   LVD+YA+C  I +A  LF  + + KN V W  MI  +S++ + ++A+  F  M+
Sbjct: 294 FFVAASLVDVYARCGQIEKAYALFA-YMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQ 352

Query: 228 VEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDL 286
             G+  N+ T+ S+L+ C+     + G      ++S    E NV   S ++D+  + G  
Sbjct: 353 QLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKT 412

Query: 287 DSARRLLEYSEIDNEVS-WNSMI 308
           D A  LL     +   S W S++
Sbjct: 413 DEAWELLNKMPFEPTASMWGSLL 435


>gi|125544635|gb|EAY90774.1| hypothetical protein OsI_12377 [Oryza sativa Indica Group]
          Length = 653

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 228/570 (40%), Positives = 339/570 (59%), Gaps = 9/570 (1%)

Query: 249 SARDFGAQVHGCILSSGF---EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           S+   GAQ+H   +  GF   + +  + +A++  YA C + D AR++ +     N V+WN
Sbjct: 84  SSLGLGAQLHAQAVVRGFLGGDDSTILATAVLSFYASCREPDLARKVFDGMPRRNAVTWN 143

Query: 306 SMIVGFARQGFHKEALSLFKKM--HARDIKIDDFTYPSVLNCFA----SNIDLNNAKSVH 359
           ++I G+A+ G  +EA+ LF+ M      +  D +T+P++L+       S   L    ++H
Sbjct: 144 ALIKGYAQAGRREEAILLFRDMKREGSHVAPDRYTFPALLSGIGREGGSGRTLELGGALH 203

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
           + ++K G E   FV  +L+ +YA +  L+ A + F+ +   D I W+S+I+        E
Sbjct: 204 AHVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGSSDPIVWSSMISAYVNCEEEE 263

Query: 420 EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
            AL  F +M    I P   V S++ S C  + +LE G+QVHA  LKS      ++ N+L+
Sbjct: 264 GALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMGKQVHAHSLKSNTEKDAAMFNALL 323

Query: 480 LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
            +Y+ CGCINDA +VF S    +VI++ ++I    Q+G  KEAL+ + QM   G  PD +
Sbjct: 324 TMYSDCGCINDAQKVFSSNDCVNVISYNSMISALGQHGYPKEALEHFRQMKFAGLMPDEV 383

Query: 540 TFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ 599
           T + L+ + +HAGL       F SM  + GIKP   HYAC++D+L RSG++ +A   +++
Sbjct: 384 TLLNLISSFNHAGLVHEGLQMFNSMVDIEGIKPMYQHYACVVDMLARSGEIGKAMKTINE 443

Query: 600 MVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDA 659
           M  E +A +W+ +L AC  H D+E G+R A  LFE+EP  A  Y+ L N+Y+  G+W +A
Sbjct: 444 MPFEAEAPLWRIVLGACSKHRDIETGKRIAEMLFEMEPYEATNYILLGNIYARLGRWTEA 503

Query: 660 ARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYV 719
            +VR LM  RG+ K+   SW+E   + + F  +DR HP+  +IY  +D ++  IK AGYV
Sbjct: 504 EKVRSLMGERGVYKDDAFSWIEMGQRTYRFGVDDRSHPISREIYRNLDRLISTIKVAGYV 563

Query: 720 PDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYI 779
           PD++FA HN++ + KE  L YH EKLA AFG L  P G  +RI KNLRVCGDCH A KY 
Sbjct: 564 PDISFAAHNIQRDRKEESLYYHCEKLAFAFGDLAAPSGGTLRIMKNLRVCGDCHCAYKYF 623

Query: 780 SAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           S V  R IILRD+ RFHHF +G CSCGDYW
Sbjct: 624 SLVTGREIILRDNQRFHHFNSGFCSCGDYW 653



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 173/363 (47%), Gaps = 21/363 (5%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
             +++ YA+      A+K+F+  P +N  TW++LI GY+  G   EA  LF  M+ EG  
Sbjct: 112 TAVLSFYASCREPDLARKVFDGMPRRNAVTWNALIKGYAQAGRREEAILLFRDMKREGSH 171

Query: 131 --PSQYTLDNVLRLCSLKG----LLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
             P +YT   +L     +G     L+ G   H + IK   + + FV   LV +YA  + +
Sbjct: 172 VAPDRYTFPALLSGIGREGGSGRTLELGGALHAHVIKAGLERDPFVGASLVSLYAARRTL 231

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            +A+  F       + + W++MI+ Y        A+  F +M  + ++  QF + ++ + 
Sbjct: 232 EDAKVAFDQV-GSSDPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSV 290

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C  +   + G QVH   L S  E +  + +AL+ MY+ CG ++ A+++   ++  N +S+
Sbjct: 291 CGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISY 350

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH----- 359
           NSMI    + G+ KEAL  F++M    +  D+ T  ++++ F      N+A  VH     
Sbjct: 351 NSMISALGQHGYPKEALEHFRQMKFAGLMPDEVTLLNLISSF------NHAGLVHEGLQM 404

Query: 360 --SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHG 416
             S++   G +        ++DM A+ G +  A    N M  + +   W  ++  C+ H 
Sbjct: 405 FNSMVDIEGIKPMYQHYACVVDMLARSGEIGKAMKTINEMPFEAEAPLWRIVLGACSKHR 464

Query: 417 SYE 419
             E
Sbjct: 465 DIE 467



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 127/248 (51%), Gaps = 2/248 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           +RD F   ++++ YA    L +AK  F++    +   WSS+I  Y N   +  A  +F+ 
Sbjct: 212 ERDPFVGASLVSLYAARRTLEDAKVAFDQVGSSDPIVWSSMISAYVNCEEEEGALLIFFN 271

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M  +  +P+Q+    V  +C   G+L+ G+Q H +++K+  + +A +   L+ MY+ C C
Sbjct: 272 MLCQDIKPTQFVYSTVFSVCGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLTMYSDCGC 331

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I +A+ +F    D  N +++ +MI+   Q+GY  +A+E FR M+  G+  ++ T  ++++
Sbjct: 332 INDAQKVFSS-NDCVNVISYNSMISALGQHGYPKEALEHFRQMKFAGLMPDEVTLLNLIS 390

Query: 244 ACAAVSARDFGAQVHGCILS-SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           +         G Q+   ++   G +      + ++DM A+ G++  A + +     + E 
Sbjct: 391 SFNHAGLVHEGLQMFNSMVDIEGIKPMYQHYACVVDMLARSGEIGKAMKTINEMPFEAEA 450

Query: 303 SWNSMIVG 310
               +++G
Sbjct: 451 PLWRIVLG 458



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 11/125 (8%)

Query: 63  SDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFW 122
           +++D   +N ++  Y++ G + +A+K+F+     N  +++S+I     +G   EA E F 
Sbjct: 312 TEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISYNSMISALGQHGYPKEALEHFR 371

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV-VTGLVDMYAKC 181
           QM+  G  P + TL N++   +  GL+  G Q            N+ V + G+  MY   
Sbjct: 372 QMKFAGLMPDEVTLLNLISSFNHAGLVHEGLQM----------FNSMVDIEGIKPMYQHY 421

Query: 182 KCIFE 186
            C+ +
Sbjct: 422 ACVVD 426



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 6/118 (5%)

Query: 20  IGPARYTHNV-GNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYA 78
           +G   + H++  N+ K A+  N  L  +S+ G I++A ++F      +  ++N+MI+A  
Sbjct: 299 MGKQVHAHSLKSNTEKDAAMFNALLTMYSDCGCINDAQKVFSSNDCVNVISYNSMISALG 358

Query: 79  NSGRLREAKKLFNETPFKNFF----TWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRP 131
             G  +EA + F +  F        T  +LI  +++ GL  E  ++F  M  +EG +P
Sbjct: 359 QHGYPKEALEHFRQMKFAGLMPDEVTLLNLISSFNHAGLVHEGLQMFNSMVDIEGIKP 416


>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
          Length = 497

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 227/535 (42%), Positives = 327/535 (61%), Gaps = 42/535 (7%)

Query: 279 MYAKC---GDLDSARRLLEYSEIDNEVSWNSMIVGFARQG-FHKEALSLFKKMHARDIKI 334
           MYAKC   G +D +R++ E     N +SW ++I  + + G   KEA+ LF KM       
Sbjct: 1   MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKM------- 53

Query: 335 DDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVF 394
                 + +NC                           V N+LI MYA+ G ++ A   F
Sbjct: 54  ----ISASVNC---------------------------VGNSLISMYARSGRMEDARKAF 82

Query: 395 NLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLE 454
           +++ +K+++S+ +++ G A +   EEA   F+++  +GI       +S+LS  A +  + 
Sbjct: 83  DILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMG 142

Query: 455 FGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCA 514
            G+Q+H   LK G  S+  + N+L+ +Y++CG I  A +VF+ M  R+VI+WT++I G A
Sbjct: 143 KGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA 202

Query: 515 QNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
           ++G    AL+ + +ML  GTKP+ IT+V +L ACSH G+    + +F SM K +GI P  
Sbjct: 203 KHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRM 262

Query: 575 DHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFE 634
           +HYACM+DLLGRSG L+EA   ++ M    DA VW+ LL ACRVHG+ ELG  AA  + E
Sbjct: 263 EHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILE 322

Query: 635 LEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDR 694
            EP +   Y+ LSN++++AG+W+D  ++RK MK R + KE GCSW+E  ++VH F   + 
Sbjct: 323 QEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGET 382

Query: 695 GHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTL 754
            HP    IY ++D++   IKE GY+PD +F LH++EEE KE  L  HSEK+AVAFGL++ 
Sbjct: 383 SHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLIST 442

Query: 755 PQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            Q  PIRIFKNLRVCGDCHTA+KYIS    R I++RDSNRFHH K G CSC DYW
Sbjct: 443 SQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 497



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 186/366 (50%), Gaps = 45/366 (12%)

Query: 177 MYAKCKC---IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
           MYAKC     + ++  +F+  P+  N ++WT +IT Y Q+G      EC ++        
Sbjct: 1   MYAKCAADGSVDDSRKVFEQMPE-HNVMSWTAIITAYVQSG------ECDKE-------- 45

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
                 +I   C  +SA         C           V ++LI MYA+ G ++ AR+  
Sbjct: 46  ------AIELFCKMISASV------NC-----------VGNSLISMYARSGRMEDARKAF 82

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
           +     N VS+N+++ G+A+    +EA  LF ++    I I  FT+ S+L+  AS   + 
Sbjct: 83  DILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMG 142

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
             + +H  ++K G++  + + NALI MY++ GN++ AF VFN M+D++VISWTS+ITG A
Sbjct: 143 KGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA 202

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ-VHAVFLKSGGCSSL 472
            HG    AL+ F  M  +G  P+ +   ++LSAC+ + ++  GQ+  ++++ + G    +
Sbjct: 203 KHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRM 262

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
                +V +  + G + +A    +SM    D + W  L+  C  +G  +      + +L 
Sbjct: 263 EHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILE 322

Query: 532 RGTKPD 537
           +  +PD
Sbjct: 323 Q--EPD 326



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 196/414 (47%), Gaps = 48/414 (11%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYG-LDIEAFELFWQMQLEGYRP 131
           M A  A  G + +++K+F + P  N  +W+++I  Y   G  D EA ELF +M       
Sbjct: 1   MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMI------ 54

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
                                      A   C      V   L+ MYA+   + +A   F
Sbjct: 55  --------------------------SASVNC------VGNSLISMYARSGRMEDARKAF 82

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
            +  + KN V++  ++ GY++N    +A   F ++   G+  + FTF S+L+  A++ A 
Sbjct: 83  DILFE-KNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAM 141

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
             G Q+HG +L  G+++N  + +ALI MY++CG++++A ++    E  N +SW SMI GF
Sbjct: 142 GKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGF 201

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGY 370
           A+ GF   AL +F KM     K ++ TY +VL+ C    +     K  +S+  + G    
Sbjct: 202 AKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPR 261

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
                 ++D+  + G L  A    N M    D + W +L+  C  HG+ E   ++ ++M 
Sbjct: 262 MEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELG-RHAAEMI 320

Query: 430 ISGICPD---HVVVSSILSACAELT-VLEFGQQVHAV-FLKSGGCSSLSVDNSL 478
           +     D   ++++S++ ++  +   V++  + +     +K  GCS + V+N +
Sbjct: 321 LEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRV 374



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 119/208 (57%), Gaps = 3/208 (1%)

Query: 43  LVDFSNSGEID-EAGQLFEKM-SDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           +  +  SGE D EA +LF KM S       N++I+ YA SGR+ +A+K F+    KN  +
Sbjct: 33  ITAYVQSGECDKEAIELFCKMISASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVS 92

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
           +++++ GY+      EAF LF ++   G   S +T  ++L   +  G + +GEQ HG  +
Sbjct: 93  YNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLL 152

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAI 220
           K  +  N  +   L+ MY++C  I  A  +F    D +N ++WT+MITG++++G+  +A+
Sbjct: 153 KGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMED-RNVISWTSMITGFAKHGFATRAL 211

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAV 248
           E F  M   G + N+ T+ ++L+AC+ V
Sbjct: 212 EMFHKMLETGTKPNEITYVAVLSACSHV 239



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 35/167 (20%), Positives = 65/167 (38%), Gaps = 40/167 (23%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +S  G I+ A Q+F +M DR+  +W +MI                               
Sbjct: 170 YSRCGNIEAAFQVFNEMEDRNVISWTSMIT------------------------------ 199

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            G++ +G    A E+F +M   G +P++ T   VL  CS  G++  G++       + + 
Sbjct: 200 -GFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKH----FNSMYK 254

Query: 166 LNAFV-----VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
            +  V        +VD+  +   + EA       P   + + W T++
Sbjct: 255 EHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL 301


>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 803

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/742 (33%), Positives = 415/742 (55%), Gaps = 11/742 (1%)

Query: 74  IAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQ 133
           +  +A+SG + +A +LF+E    + F W+ +I G+++ GL  EA +L+ +M   G +   
Sbjct: 67  LRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADS 126

Query: 134 YTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKM 193
           +T   V++  +    L+ G++ H   IK  F  + +V   L+ +Y K  C ++AE +F+ 
Sbjct: 127 FTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEE 186

Query: 194 FPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDF 253
            P+ ++ V+W +MI+GY     GF+++  F++M   G + ++F+  S L AC+ V + + 
Sbjct: 187 MPE-RDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNM 245

Query: 254 GAQVHGCILSSGFEA-NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
           G ++H   + S  E  +V V ++++DMY+K G++  A R+ +     N V+WN +I  +A
Sbjct: 246 GKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYA 305

Query: 313 RQGFHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
           R     +A   F+KM  ++ ++ D  T  ++L   A    +   +++H   ++ GF  + 
Sbjct: 306 RNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACA----ILEGRTIHGYAMRRGFLPHI 361

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
            ++ ALIDMY + G L  A ++F+ + +K++ISW S+I     +G    AL+ F  +  S
Sbjct: 362 VLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDS 421

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
            + PD   ++SIL A AE   L  G+Q+HA  +KS   S+  + NSLV +YA CG + DA
Sbjct: 422 SLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDA 481

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
            + F+ +  +DV++W ++IM  A +G G+ ++  + +M+A    P+  TF  LL ACS +
Sbjct: 482 RKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSIS 541

Query: 552 GLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKA 611
           G+ +    YFESM + YGI PG +HY  M+DL+GR+G    AK  + +M   P A +W +
Sbjct: 542 GMVDEGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPFLPTARIWGS 601

Query: 612 LLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
           LL+A R H D+ + E AA  +F++E  N   YV L NMY+ A +WED  R++ LM+S+GI
Sbjct: 602 LLNASRNHNDITVAEFAAEQIFKMEHDNTGCYVLLLNMYAEARRWEDVNRIKLLMESKGI 661

Query: 672 RKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLI----KEAGYVPDMNFALH 727
            +    S VE  S+ H+  + DR H     IY  +D +  +I    +E  YV  ++    
Sbjct: 662 SRTSSRSTVEAKSKTHVLTNGDRSHVETNKIYEVLDIVSRMIGEEEEEDSYVHYVSKLRR 721

Query: 728 NVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHI 787
               + +      HS +LA  FGL++   G  + +  N R+C  CH  ++  S +  R I
Sbjct: 722 ETLAKSRSNSPRRHSVRLATCFGLISTETGRTVTVRNNTRICRKCHEFLEKASKMTRREI 781

Query: 788 ILRDSNRFHHFKAGNCSCGDYW 809
           ++ DS  FHHF  G CSCG+YW
Sbjct: 782 VVGDSKIFHHFSNGRCSCGNYW 803



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 209/385 (54%), Gaps = 7/385 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +  N++I+ Y   G   +A+K+F E P ++  +W+S+I GY        +  LF +M 
Sbjct: 160 DVYVCNSLISLYMKLGCSWDAEKVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEML 219

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDL-NAFVVTGLVDMYAKCKCI 184
             G++P +++  + L  CS       G++ H +A+++  +  +  V+T ++DMY+K   +
Sbjct: 220 KFGFKPDRFSTMSALGACSHVYSPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEV 279

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE-GVESNQFTFPSILT 243
             AE +FK     +N VAW  +I  Y++N     A  CF+ M  + G++ +  T  ++L 
Sbjct: 280 SYAERIFKCIIQ-RNIVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLP 338

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           ACA +  R     +HG  +  GF  ++ + +ALIDMY + G L SA  + +     N +S
Sbjct: 339 ACAILEGR----TIHGYAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLIS 394

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WNS+I  + + G +  AL LF+K+    +  D  T  S+L  +A ++ L+  + +H+ IV
Sbjct: 395 WNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIV 454

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K+ +     + N+L+ MYA  G+L+ A   FN +  KDV+SW S+I   A HG    ++ 
Sbjct: 455 KSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVC 514

Query: 424 YFSDMRISGICPDHVVVSSILSACA 448
            FS+M  S + P+    +S+L+AC+
Sbjct: 515 LFSEMIASKVDPNKSTFASLLAACS 539



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 114/238 (47%), Gaps = 3/238 (1%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +I  Y   G+L+ A+ +F+    KN  +W+S+I  Y   G +  A ELF ++      P 
Sbjct: 367 LIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPD 426

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
             T+ ++L   +    L  G Q H Y +K+ +  N  ++  LV MYA C  + +A   F 
Sbjct: 427 STTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFN 486

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
                K+ V+W ++I  Y+ +G+G  ++  F +M    V+ N+ TF S+L AC+     D
Sbjct: 487 HVL-LKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVD 545

Query: 253 FGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLL-EYSEIDNEVSWNSMI 308
            G +    +    G +  +     ++D+  + G+  SA+R + E   +     W S++
Sbjct: 546 EGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPFLPTARIWGSLL 603



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 47/85 (55%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N+++  YA  G L +A+K FN    K+  +W+S+I  Y+ +G    +  LF +M      
Sbjct: 466 NSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVD 525

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQF 155
           P++ T  ++L  CS+ G++  G ++
Sbjct: 526 PNKSTFASLLAACSISGMVDEGWEY 550


>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 691

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 230/594 (38%), Positives = 357/594 (60%), Gaps = 3/594 (0%)

Query: 218 KAIECFRDMRVE--GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSA 275
           +A+E F  + +E  G      T+ ++++AC  + +     +V   +++SGFE ++YV + 
Sbjct: 99  EAMELFEILELEHDGYGVGASTYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNR 158

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           ++ M+ KCG +  AR+L +     +  SW +M+ G    G   EA  LF  M        
Sbjct: 159 VLFMHVKCGLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGR 218

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
             T+ +++   A    +   K +HS  +K G     FV+ ALIDMY+K G+++ A  VF+
Sbjct: 219 SRTFATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFD 278

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
            M +K  + W S+I   A HG  EEAL  + +MR SG   DH  +S ++  CA L  LE 
Sbjct: 279 QMPEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEH 338

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
            +Q HA  ++ G  + +  + +LV  Y+K G + DA  VF+ M  ++VI+W ALI G   
Sbjct: 339 AKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGN 398

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
           +G+G+EA++ ++QML  G  P ++TF+ +L ACS++GL++     F SM + + +KP   
Sbjct: 399 HGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWEIFYSMKRDHKVKPRAM 458

Query: 576 HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
           HYACMI+LLGR   L EA AL+     +P A +W ALL+ACR+H +LELG+ AA  L+ +
Sbjct: 459 HYACMIELLGRESLLDEAYALIRTAPFKPTANMWAALLTACRMHKNLELGKLAAEKLYGM 518

Query: 636 EPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG 695
           EP     Y+ L N+Y+++GK ++AA + + +K +G+R  P CSWVE   Q + F+  D+ 
Sbjct: 519 EPEKLCNYIVLLNLYNSSGKLKEAAGILQTLKKKGLRMLPACSWVEVKKQPYAFLCGDKS 578

Query: 696 HPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLP 755
           H    +IY K+D +M+ I + GY  +    L +V+EE + I L YHSEKLA+AFGL+  P
Sbjct: 579 HSQTKEIYQKVDNLMVEICKHGYAEENETLLPDVDEEEQRI-LKYHSEKLAIAFGLINTP 637

Query: 756 QGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
              P++I +  RVCGDCH+A+K I+ V  R I++RD++RFHHF+ G+CSCGDYW
Sbjct: 638 HWTPLQITQGHRVCGDCHSAIKLIAMVTGREIVVRDASRFHHFRNGSCSCGDYW 691



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 145/494 (29%), Positives = 232/494 (46%), Gaps = 52/494 (10%)

Query: 116 EAFELFWQMQLE--GYRPSQYTLDNVLRLC----SLKGLLQRGEQFHGYAIKTCFDLNAF 169
           EA ELF  ++LE  GY     T D ++  C    S++G+    ++   Y I + F+ + +
Sbjct: 99  EAMELFEILELEHDGYGVGASTYDALVSACVGLRSIRGV----KRVFNYMINSGFEPDLY 154

Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
           V+  ++ M+ KC  + +A  LF   P+ K+  +W TM+ G    G   +A   F  M  E
Sbjct: 155 VMNRVLFMHVKCGLMLDARKLFDEMPE-KDVASWMTMVGGLVDTGNFSEAFRLFLCMWKE 213

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
             +    TF +++ A A +     G Q+H C L  G   + +V  ALIDMY+KCG ++ A
Sbjct: 214 FNDGRSRTFATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDA 273

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
             + +       V WNS+I  +A  G+ +EALSL+ +M      +D FT   V+   A  
Sbjct: 274 HCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARL 333

Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
             L +AK  H+ +V+ GF      N AL+D Y+K G ++ A  VFN M+ K+VISW +LI
Sbjct: 334 ASLEHAKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALI 393

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
            G   HG  +EA++ F  M   G+ P HV   ++LSAC+   + + G +           
Sbjct: 394 AGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWE----------- 442

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEAL--QFYD 527
                                   +F SM     +   A+   C     G+E+L  + Y 
Sbjct: 443 ------------------------IFYSMKRDHKVKPRAMHYACMIELLGRESLLDEAYA 478

Query: 528 QMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP-DHYACMIDLLGR 586
            +     KP    +  LL AC    + +N      + +K+YG++P    +Y  +++L   
Sbjct: 479 LIRTAPFKPTANMWAALLTACR---MHKNLELGKLAAEKLYGMEPEKLCNYIVLLNLYNS 535

Query: 587 SGKLIEAKALLDQM 600
           SGKL EA  +L  +
Sbjct: 536 SGKLKEAAGILQTL 549



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 186/375 (49%), Gaps = 5/375 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           + D +  N ++  +   G + +A+KLF+E P K+  +W +++ G  + G   EAF LF  
Sbjct: 150 EPDLYVMNRVLFMHVKCGLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLC 209

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M  E       T   ++R  +  GL+Q G+Q H  A+K     + FV   L+DMY+KC  
Sbjct: 210 MWKEFNDGRSRTFATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGS 269

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I +A  +F   P+ K  V W ++I  Y+ +GY  +A+  + +MR  G   + FT   ++ 
Sbjct: 270 IEDAHCVFDQMPE-KTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIR 328

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
            CA +++ +   Q H  ++  GF  ++   +AL+D Y+K G ++ AR +       N +S
Sbjct: 329 ICARLASLEHAKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVIS 388

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLI 362
           WN++I G+   G  +EA+ +F++M    +     T+ +VL+ C  S +     +  +S+ 
Sbjct: 389 WNALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWEIFYSMK 448

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEA 421
                +        +I++  ++  LD A+ +      K   + W +L+T C  H + E  
Sbjct: 449 RDHKVKPRAMHYACMIELLGRESLLDEAYALIRTAPFKPTANMWAALLTACRMHKNLE-- 506

Query: 422 LKYFSDMRISGICPD 436
           L   +  ++ G+ P+
Sbjct: 507 LGKLAAEKLYGMEPE 521



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 73/178 (41%), Gaps = 35/178 (19%)

Query: 36  ASDL--NRALVDF-SNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE 92
           A+D+  N ALVDF S  G +++A  +F +M  ++  +WN +IA Y N G+ +        
Sbjct: 352 ATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQ-------- 403

Query: 93  TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
                                  EA E+F QM  EG  P+  T   VL  CS  GL QRG
Sbjct: 404 -----------------------EAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRG 440

Query: 153 -EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
            E F+           A     ++++  +   + EA  L +  P       W  ++T 
Sbjct: 441 WEIFYSMKRDHKVKPRAMHYACMIELLGRESLLDEAYALIRTAPFKPTANMWAALLTA 498


>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1736

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 261/754 (34%), Positives = 426/754 (56%), Gaps = 13/754 (1%)

Query: 65   RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
            +D +  + +++ +A  G   +AK +F +   +N  + + L+ G         A ++F +M
Sbjct: 315  QDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM 374

Query: 125  Q-LEGYRPSQYT--LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV-TGLVDMYAK 180
            + L G     Y   L        L+   ++G + H + I+T  + N   +  GLV+MYAK
Sbjct: 375  KDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAK 434

Query: 181  CKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
               I +A  +F++  + K+ V+W ++I+G  QN     A E F  MR  G   + FT  S
Sbjct: 435  SGAIADACSVFELMVE-KDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLIS 493

Query: 241  ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
             L++CA++     G Q+H   L  G + +V V +AL+ +YA+ G      ++       +
Sbjct: 494  TLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYD 553

Query: 301  EVSWNSMIVGFA-RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
            +VSWNS+I   +  +    +A+  F +M      +   T+ ++L+  +S      +  +H
Sbjct: 554  QVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIH 613

Query: 360  SLIVKTGFEGYKFVNNALIDMYAKQGNL-DCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
            +L++K        + NAL+  Y K G + +C  +   + + +D +SW S+I+G  ++   
Sbjct: 614  ALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELL 673

Query: 419  EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSL 478
             +A+     M   G   D    ++ILSACA +  LE G +VHA  +++   S + V ++L
Sbjct: 674  HKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSAL 733

Query: 479  VLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDY 538
            V +Y+KCG I+ A+R F+ M  R+V +W ++I G A++G G++AL+ + +M+  G  PD+
Sbjct: 734  VDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDH 793

Query: 539  ITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLD 598
            +TFVG+L ACSH G  E    +F+SM +VY + P  +H++CM+DLLGR+GKL E    ++
Sbjct: 794  VTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFIN 853

Query: 599  QMVGEPDATVWKALLSA-CRVHG-DLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
             M  +P+  +W+ +L A CR +G + ELG RAA  L ELEP NA+ YV L+NMY++  KW
Sbjct: 854  SMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKW 913

Query: 657  EDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA 716
            ED A+ R  MK   ++KE GCSWV     VH+F++ D+ HP +  IY K+ E+   +++A
Sbjct: 914  EDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMRDA 973

Query: 717  GYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAM 776
            GY+P   +AL ++E E KE  L+YHSEK+AVAF +LT     PIRI KNLRVCGDCH+A 
Sbjct: 974  GYIPQTKYALFDLELENKEELLSYHSEKIAVAF-VLTRQSALPIRIMKNLRVCGDCHSAF 1032

Query: 777  KYISAV--YLRHIILRDSNRFHHFKAGNCSCGDY 808
             YIS +  +   + ++ SN     +   C CGD+
Sbjct: 1033 GYISKIIFFFLKMAMKPSNNI-WIRRQQCPCGDW 1065



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 178/577 (30%), Positives = 294/577 (50%), Gaps = 33/577 (5%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  NT+I  Y   G L  A+KLF+E   +N  TW+ LI GY+  G   EA   F  M   
Sbjct: 107 FLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRA 166

Query: 128 GYRPSQYTLDNVLRLCSLKGL--LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC-KCI 184
           G+ P+ Y   + LR C   G    + G Q HG   KT +  +  V   L+ MY  C    
Sbjct: 167 GFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSA 226

Query: 185 FEAEYLFKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV----ESNQFT 237
            +A  +F    DG   +N ++W ++I+ YS+ G    A + F  M+ EG+    + N++T
Sbjct: 227 NDARSVF----DGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYT 282

Query: 238 FPSIL-TACAAVSARDFG----AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
           F S++ TAC++V   DFG     Q+   +  SGF  ++YV SAL+  +A+ G  D A+ +
Sbjct: 283 FGSLITTACSSV---DFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNI 339

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNID 351
            E   + N VS N ++VG  +Q   + A  +F +M  +D + I+  +Y  +L+ F+    
Sbjct: 340 FEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM--KDLVGINSDSYVVLLSAFSEFSV 397

Query: 352 LN----NAKSVHSLIVKTGFEGYKF-VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWT 406
           L       + VH+ +++TG    K  + N L++MYAK G +  A  VF LM +KD +SW 
Sbjct: 398 LEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWN 457

Query: 407 SLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
           SLI+G   +   E+A + F  MR +G  P +  + S LS+CA L  +  G+Q+H   LK 
Sbjct: 458 SLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKL 517

Query: 467 GGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN-GKGKEALQF 525
           G  + +SV N+L+ +YA+ GC  +  +VF  M   D ++W ++I   + +     +A+++
Sbjct: 518 GLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKY 577

Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
           + QM+  G     +TF+ +L A S   L E +      + K Y +         ++   G
Sbjct: 578 FLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLK-YCLSDDTAIGNALLSCYG 636

Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDL 622
           + G++ E + +  +M    D   W +++S   +H +L
Sbjct: 637 KCGEMNECEKIFARMSETRDEVSWNSMISG-YIHNEL 672



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 181/363 (49%), Gaps = 25/363 (6%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI-EAFELFW 122
           D D    N ++A YA +G   E  K+F+  P  +  +W+S+I   S+    + +A + F 
Sbjct: 520 DTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFL 579

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           QM   G+  S+ T  N+L   S   L +   Q H   +K C   +  +   L+  Y KC 
Sbjct: 580 QMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCG 639

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            + E E +F    + ++ V+W +MI+GY  N    KA++    M  +G   + FTF +IL
Sbjct: 640 EMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATIL 699

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           +ACA+V+  + G +VH C + +  E++V V SAL+DMY+KCG +D A R  E   + N  
Sbjct: 700 SACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVY 759

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SWNSMI G+AR G  ++AL LF +M       D  T+  VL+  +           H   
Sbjct: 760 SWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACS-----------HVGF 808

Query: 363 VKTGFEGYKFVN------------NALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLI 409
           V+ GFE +K ++            + ++D+  + G LD      N M  K +V+ W +++
Sbjct: 809 VEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVL 868

Query: 410 TGC 412
             C
Sbjct: 869 GAC 871



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 210/445 (47%), Gaps = 38/445 (8%)

Query: 233 SNQFTFPSILT----ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
           S+  TF S++     +C +  AR+   Q     +  GF  N+++ + LI++Y + GDL S
Sbjct: 69  SSSETFESLINRYQGSCCSEEARELHLQS----IKYGFVGNLFLSNTLINIYVRIGDLGS 124

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFA 347
           A++L +     N V+W  +I G+ + G   EA + F+ M       + + + S L  C  
Sbjct: 125 AQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQE 184

Query: 348 SNID-LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK-QGNLDCAFMVFNLMQDKDVISW 405
           S          +H LI KT +     V N LI MY     + + A  VF+ +  ++ ISW
Sbjct: 185 SGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISW 244

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGIC----PDHVVVSSIL-SACAELTVLEFG---- 456
            S+I+  +  G    A   FS M+  G+     P+     S++ +AC+    ++FG    
Sbjct: 245 NSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSS---VDFGLCVL 301

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
           +Q+ A   KSG    L V ++LV  +A+ G  +DA  +F+ M  R+V++   L++G  + 
Sbjct: 302 EQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQ 361

Query: 517 GKGKEALQFYDQML-ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
            +G+ A + + +M    G   D  ++V LL A S   + E  R     +   + I+ G +
Sbjct: 362 KQGEAAAKVFHEMKDLVGINSD--SYVVLLSAFSEFSVLEEGRRKGREV-HAHVIRTGLN 418

Query: 576 HYAC-----MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAAN 630
                    ++++  +SG + +A ++ + MV E D+  W +L+S    +   E  E AA 
Sbjct: 419 DNKVAIGNGLVNMYAKSGAIADACSVFELMV-EKDSVSWNSLISGLDQN---ECSEDAAE 474

Query: 631 NLFELEPMNAMP--YVQLSNMYSTA 653
           +   +    +MP  +  +S + S A
Sbjct: 475 SFHRMRRTGSMPSNFTLISTLSSCA 499



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 156/343 (45%), Gaps = 9/343 (2%)

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           T+ S++N +  +     A+ +H   +K GF G  F++N LI++Y + G+L  A  +F+ M
Sbjct: 73  TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 132

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE--LTVLEF 455
            ++++++W  LI+G   +G  +EA   F DM  +G  P+H    S L AC E   +  + 
Sbjct: 133 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 192

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKC-GCINDANRVFDSMHTRDVITWTALIMGCA 514
           G Q+H +  K+   S + V N L+ +Y  C    NDA  VFD +  R+ I+W ++I   +
Sbjct: 193 GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYS 252

Query: 515 QNGKGKEALQFYDQMLARGT----KPDYITFVGLL-FACSHAGLAENARWYFESMDKVYG 569
           + G    A   +  M   G     KP+  TF  L+  ACS             +  +  G
Sbjct: 253 RRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSG 312

Query: 570 IKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAA 629
                   + ++    R G   +AK + +QM G  +      L+         E   +  
Sbjct: 313 FLQDLYVSSALVSGFARFGLTDDAKNIFEQM-GVRNVVSMNGLMVGLVKQKQGEAAAKVF 371

Query: 630 NNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIR 672
           + + +L  +N+  YV L + +S     E+  R  + + +  IR
Sbjct: 372 HEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIR 414



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 70/169 (41%), Gaps = 35/169 (20%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           ALVD +S  G ID A + FE M  R+ ++WN+MI+ YA  G   +A KLF          
Sbjct: 732 ALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFT--------- 782

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
                                 +M L+G  P   T   VL  CS  G ++ G + H  ++
Sbjct: 783 ----------------------RMMLDGQPPDHVTFVGVLSACSHVGFVEEGFE-HFKSM 819

Query: 161 KTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
              + L+  V   + +VD+  +   + E        P   N + W T++
Sbjct: 820 SEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVL 868


>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 755

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 232/684 (33%), Positives = 373/684 (54%), Gaps = 49/684 (7%)

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQN-GYGFKAIECFRDMRVEGVE 232
           L+ +Y K   +  A  LF      KN   WT +I+G+++  G        FR+M+ +G  
Sbjct: 73  LLTLYVKSSNLDHAHKLFDEITH-KNTQTWTILISGFARAAGSSELVFSLFREMQADGAC 131

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
            NQ+T  S+L  C+  +   FG  +H  IL +G   +V ++++++D+Y KC + + A   
Sbjct: 132 PNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESF 191

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
            E     + VSWN MI  + R+G  +++L +F+    +D+   +     ++ C    + L
Sbjct: 192 FELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLAL 251

Query: 353 NN-------------------------------AKSVHSLIVKTGFEGYKFVNNALIDMY 381
                                             + +H  ++  G     ++ ++L++MY
Sbjct: 252 EQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMY 311

Query: 382 AKQGNLDCAFMVF-----NLMQDKD-----------VISWTSLITGCAYHGSYEEALKYF 425
            K G +D A  +      N ++  +           ++SW+S+++G  ++G YE+ +K F
Sbjct: 312 GKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTF 371

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             M    I  D   V++I+SACA   +LEFG+Q+HA   K G      V +SL+ +Y+K 
Sbjct: 372 RSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKS 431

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G ++DA  +F+ +   +V+ WT++I GCA +G+GKEA+  ++ ML  G  P+ +TFVG+L
Sbjct: 432 GSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVL 491

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
            ACSH GL E    YF  M   Y I P  +HY  M++L GR+G LIEAK  + +      
Sbjct: 492 NACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHF 551

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
            +VW++ LS+CR+H +  +G+  +  L +  P +   Y+ LSNM S+  +W++AA VR L
Sbjct: 552 TSVWRSFLSSCRLHKNFNMGKSVSEMLLQSAPSDPDAYILLSNMCSSNHQWDEAAIVRSL 611

Query: 666 MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFA 725
           M  RG++K+PG SWV+   Q+H F   DR HP   +IYS +D ++  +KE GY  D    
Sbjct: 612 MYQRGVKKQPGQSWVQLKDQIHSFTVGDRSHPQDKEIYSYLDSLIGRLKEIGYSLDAKLV 671

Query: 726 LHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLR 785
           + +VEEE  E+ +++HSEKLA+ F ++      PIRI KNLR+C DCH   KY S +  R
Sbjct: 672 MQDVEEEQGEVLISHHSEKLALVFSIINTSPRTPIRIMKNLRICNDCHNFFKYASQLLER 731

Query: 786 HIILRDSNRFHHFKAGNCSCGDYW 809
            II+RD++RFHHFK  +CSCG+YW
Sbjct: 732 EIIVRDTHRFHHFKQSSCSCGEYW 755



 Score =  235 bits (599), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 176/625 (28%), Positives = 298/625 (47%), Gaps = 78/625 (12%)

Query: 5   DFKILNFSLRCRSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSD 64
           +F I+NF    RS+   P  + H+  +   P S   RAL            G  F+K S 
Sbjct: 20  NFHIVNFPFHSRSR--QPCSFLHSTTSIGSPPSL--RAL-----------HGHYFKKGSL 64

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE-AFELFWQ 123
           +   + N ++  Y  S  L  A KLF+E   KN  TW+ LI G++      E  F LF +
Sbjct: 65  QILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFRE 124

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           MQ +G  P+QYTL +VL+ CS +  +Q G+  H + ++     +  +   ++D+Y KCK 
Sbjct: 125 MQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKE 184

Query: 184 IFEAEYLFKM-------------------------------FPDGKNHVAWTTMITGYSQ 212
              AE  F++                               FP+ K+ V+W T+I G  Q
Sbjct: 185 FEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPN-KDVVSWNTIIDGLIQ 243

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYV 272
            GY   A+E    M   G E +  TF   L   +++S  + G Q+HG +L+ G  ++ Y+
Sbjct: 244 CGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYI 303

Query: 273 QSALIDMYAKCGDLDSARRLLEYSEID----------------NEVSWNSMIVGFARQGF 316
           +S+L++MY KCG +D A  +L+   ++                  VSW+SM+ G+   G 
Sbjct: 304 RSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGK 363

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
           +++ +  F+ M    I +D  T  ++++  A+   L   K +H+ I K G     +V ++
Sbjct: 364 YEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSS 423

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           LIDMY+K G+LD A M+F  +++ +V+ WTS+I+GCA HG  +EA+  F  M   GI P+
Sbjct: 424 LIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPN 483

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLVLVYAKCGCINDA-NR 493
            V    +L+AC+ + ++E G + +   +K     +  V++  S+V +Y + G + +A N 
Sbjct: 484 EVTFVGVLNACSHVGLIEEGCR-YFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNF 542

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGL 553
           +F++  +     W + +  C  + K     +   +ML +    D   ++ L   CS    
Sbjct: 543 IFENSISHFTSVWRSFLSSCRLH-KNFNMGKSVSEMLLQSAPSDPDAYILLSNMCS---- 597

Query: 554 AENARW----YFESMDKVYGIKPGP 574
             N +W       S+    G+K  P
Sbjct: 598 -SNHQWDEAAIVRSLMYQRGVKKQP 621



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 11/172 (6%)

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ- 515
           + +H  + K G    L+  N L+ +Y K   ++ A+++FD +  ++  TWT LI G A+ 
Sbjct: 52  RALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARA 111

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENAR----WYFESMDKVYGIK 571
            G  +     + +M A G  P+  T   +L  CS     +  +    W   +     G+ 
Sbjct: 112 AGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRN-----GVG 166

Query: 572 PGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
                   ++DL  +  +   A++  + M+ E D   W  ++ A    GD+E
Sbjct: 167 GDVVLENSILDLYLKCKEFEYAESFFELMI-EKDVVSWNIMIGAYLREGDVE 217


>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
 gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 635

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 229/577 (39%), Positives = 342/577 (59%)

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
           SN+     IL  CA   A       HG I+    E +V + + LI+ Y+KCG ++ AR++
Sbjct: 59  SNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQV 118

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
            +     + VSWN+MI  + R     EAL +F +M     K  +FT  SVL+    N D 
Sbjct: 119 FDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDA 178

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
              K +H L VKT  +   +V  AL+D+YAK G +  A  VF  MQDK  ++W+S++ G 
Sbjct: 179 LECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGY 238

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
             + +YEEAL  +   +   +  +   +SS++ AC+ L  L  G+Q+HAV  KSG  S++
Sbjct: 239 VQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNV 298

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
            V +S V +YAKCG + ++  +F  +  +++  W  +I G A++ + KE +  +++M   
Sbjct: 299 FVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQD 358

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIE 592
           G  P+ +TF  LL  C H GL E  R +F+ M   YG+ P   HY+CM+D+LGR+G L E
Sbjct: 359 GMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSE 418

Query: 593 AKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYST 652
           A  L+  +  +P A++W +LL++CRV+ +LEL E AA  LFELEP NA  +V LSN+Y+ 
Sbjct: 419 AYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAA 478

Query: 653 AGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLL 712
             +WE+ A+ RKL++   ++K  G SW++   +VH F   + GHP   +I S +D +++ 
Sbjct: 479 NKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIK 538

Query: 713 IKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDC 772
            ++ GY P +   LH+VE   KE  L  HSEKLA+ FGL+ LP+ +P+RI KNLR+C DC
Sbjct: 539 FRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDC 598

Query: 773 HTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           H  MK  S    R II+RD NRFHHF  G+CSCGD+W
Sbjct: 599 HEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 231/437 (52%), Gaps = 17/437 (3%)

Query: 20  IGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEA----GQLFEKMSDRDGFTWNTMIA 75
           + P RY++   N     + ++  L   + +G + EA    G++     + D    N +I 
Sbjct: 49  VSPGRYSNEFSNR----NLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLIN 104

Query: 76  AYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYT 135
           AY+  G +  A+++F+    ++  +W+++I  Y+   ++ EA ++F +M+ EG++ S++T
Sbjct: 105 AYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFT 164

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
           + +VL  C +       ++ H  ++KTC DLN +V T L+D+YAKC  I +A  +F+   
Sbjct: 165 ISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ 224

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGA 255
           D K+ V W++M+ GY QN    +A+  +R  +   +E NQFT  S++ AC+ ++A   G 
Sbjct: 225 D-KSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGK 283

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           Q+H  I  SGF +NV+V S+ +DMYAKCG L  +  +    +  N   WN++I GFA+  
Sbjct: 284 QMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHA 343

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT-GFEGYKFVN 374
             KE + LF+KM    +  ++ T+ S+L+       +   +    L+  T G        
Sbjct: 344 RPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHY 403

Query: 375 NALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
           + ++D+  + G L  A+ ++ ++  D     W SL+  C  + + E  L   +  ++  +
Sbjct: 404 SCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLE--LAEVAAEKLFEL 461

Query: 434 CPD----HVVVSSILSA 446
            P+    HV++S+I +A
Sbjct: 462 EPENAGNHVLLSNIYAA 478


>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
          Length = 714

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 223/569 (39%), Positives = 350/569 (61%), Gaps = 4/569 (0%)

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           +++C +VS   + + +H  ++ S   ++ ++   L+ MY K G  + A+RL +     + 
Sbjct: 149 ISSCTSVS---YCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDL 205

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIK-IDDFTYPSVLNCFASNIDLNNAKSVHS 360
           VSWNS++ G + +G+    L+ F +M     +  ++ T  SV++  A    L+  KS+H 
Sbjct: 206 VSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHG 265

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
           ++VK G  G   V N+LI+MY K G LD A  +F  M  + ++SW S++    ++G  E+
Sbjct: 266 VVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEK 325

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
            +  F+ M+ +GI PD   + ++L AC +  +    + +HA   + G  + + +  +L+ 
Sbjct: 326 GMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLN 385

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           +YAK G +N +  +F+ +  RD I WTA++ G A +  G+EA++ +D M+  G + D++T
Sbjct: 386 LYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVT 445

Query: 541 FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
           F  LL ACSH+GL E  + YFE M +VY ++P  DHY+CM+DLLGRSG+L +A  L+  M
Sbjct: 446 FTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSM 505

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAA 660
             EP + VW ALL ACRV+G++ELG+  A  L  L+P +   Y+ LSN+YS AG W  A+
Sbjct: 506 PMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRXAS 565

Query: 661 RVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
           +VR LMK R + + PGCS++E  +++H F+  D+ HP   +I++K++E++  I EAG  P
Sbjct: 566 KVRXLMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIXEAGCAP 625

Query: 721 DMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYIS 780
              F LH+++EE K   +  HSEKLA+AFGLL    G P+ I KNLR+CGDCH+  K+ S
Sbjct: 626 KTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFAS 685

Query: 781 AVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            +  R II+RDS RFHHF  G CSC DYW
Sbjct: 686 LLEKRTIIIRDSKRFHHFADGLCSCRDYW 714



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 202/406 (49%), Gaps = 5/406 (1%)

Query: 155 FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
            H   IK+    + F+   LV MY K     +A+ LF   P+ ++ V+W ++++G S  G
Sbjct: 161 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPN-RDLVSWNSLMSGLSGRG 219

Query: 215 YGFKAIECFRDMRVE-GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
           Y    +  F  MR E G + N+ T  S+++ACA + A D G  +HG ++  G      V 
Sbjct: 220 YLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVV 279

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
           ++LI+MY K G LD+A +L E   + + VSWNSM+V     G+ ++ + LF  M    I 
Sbjct: 280 NSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGIN 339

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
            D  T  ++L           A+S+H+ I + GF     +  AL+++YAK G L+ +  +
Sbjct: 340 PDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDI 399

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           F  ++D+D I+WT+++ G A H    EA+K F  M   G+  DHV  + +LSAC+   ++
Sbjct: 400 FEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLV 459

Query: 454 EFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVI-TWTALIM 511
           E G++   +  +       L   + +V +  + G + DA  +  SM        W AL+ 
Sbjct: 460 EEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLG 519

Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENA 557
            C   G  +   +  +Q+L+     D+  ++ L    S AGL   A
Sbjct: 520 ACRVYGNVELGKEVAEQLLSLDPS-DHRNYIMLSNIYSAAGLWRXA 564



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 102/401 (25%), Positives = 205/401 (51%), Gaps = 16/401 (3%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            ++ + ++  DGF  + +++ Y   G   +A++LF+E P ++  +W+SL+ G S  G   
Sbjct: 163 ARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLG 222

Query: 116 EAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
                F +M+ E G +P++ TL +V+  C+  G L  G+  HG  +K      A VV  L
Sbjct: 223 ACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSL 282

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           ++MY K   +  A  LF+  P  ++ V+W +M+  ++ NGY  K ++ F  M+  G+  +
Sbjct: 283 INMYGKLGFLDAASQLFEEMPV-RSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPD 341

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
           Q T  ++L AC           +H  I   GF A++ + +AL+++YAK G L+++  + E
Sbjct: 342 QATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFE 401

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
             +  + ++W +M+ G+A     +EA+ LF  M    +++D  T+  +L+  + +  +  
Sbjct: 402 EIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEE 461

Query: 355 AKSVHSLI-----VKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSL 408
            K    ++     V+   + Y    + ++D+  + G L+ A+ ++ ++  +     W +L
Sbjct: 462 GKKYFEIMSEVYRVEPRLDHY----SCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGAL 517

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDH---VVVSSILSA 446
           +  C  +G+ E   K  ++  +S    DH   +++S+I SA
Sbjct: 518 LGACRVYGNVELG-KEVAEQLLSLDPSDHRNYIMLSNIYSA 557



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 176/356 (49%), Gaps = 14/356 (3%)

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           K+H   +  D     S++   +S   ++   ++H+ ++K+      F+ + L+ MY K G
Sbjct: 130 KLHNSSLLADSIVQ-SLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLG 188

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI-SGICPDHVVVSSIL 444
             + A  +F+ M ++D++SW SL++G +  G     L  F  MR  SG  P+ V + S++
Sbjct: 189 YDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVV 248

Query: 445 SACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVI 504
           SACA +  L+ G+ +H V +K G      V NSL+ +Y K G ++ A+++F+ M  R ++
Sbjct: 249 SACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLV 308

Query: 505 TWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESM 564
           +W ++++    NG  ++ +  ++ M   G  PD  T V LL AC+  GL   A      +
Sbjct: 309 SWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYI 368

Query: 565 DKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLEL 624
            +  G          +++L  + G+L  ++ + ++ + + D   W A+L+   VH     
Sbjct: 369 HRC-GFNADIIIATALLNLYAKLGRLNASEDIFEE-IKDRDTIAWTAMLAGYAVHA---- 422

Query: 625 GERAANNLFELE-----PMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEP 675
             R A  LF+L       ++ + +  L +  S +G  E+  +  ++M S   R EP
Sbjct: 423 CGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIM-SEVYRVEP 477



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 126/261 (48%), Gaps = 35/261 (13%)

Query: 36  ASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF 95
           A  +N  +  +   G +D A QLFE+M  R   +WN+M+  + ++               
Sbjct: 276 AKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHN--------------- 320

Query: 96  KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
                      GY+  G+D     LF  M+  G  P Q T+  +LR C+  GL ++ E  
Sbjct: 321 -----------GYAEKGMD-----LFNLMKRAGINPDQATMVALLRACTDTGLGRQAESI 364

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGY 215
           H Y  +  F+ +  + T L+++YAK   +  +E +F+   D ++ +AWT M+ GY+ +  
Sbjct: 365 HAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKD-RDTIAWTAMLAGYAVHAC 423

Query: 216 GFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF--EANVYVQ 273
           G +AI+ F  M  EGVE +  TF  +L+AC+     + G +    I+S  +  E  +   
Sbjct: 424 GREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFE-IMSEVYRVEPRLDHY 482

Query: 274 SALIDMYAKCGDLDSARRLLE 294
           S ++D+  + G L+ A  L++
Sbjct: 483 SCMVDLLGRSGRLEDAYELIK 503


>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
           [Vitis vinifera]
 gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 225/545 (41%), Positives = 333/545 (61%), Gaps = 4/545 (0%)

Query: 269 NVYVQSALIDMYAKCGDLDSARRLLEYSEID---NEVSWNSMIVGFARQGFHKEALSLFK 325
           N  ++  LI +++ C  +D ARR+ E    D    E  W +M +G++R G+ KEAL L+ 
Sbjct: 108 NPTLKGKLITLFSVCRRVDEARRVFEDGGEDVDLPESVWVAMGIGYSRNGYPKEALLLYY 167

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           +M  +  ++ +F +   L   +   DL   ++VH+ ++K   +  + VNNAL+ +Y++ G
Sbjct: 168 EMVCQFGQLGNFAFSMALKACSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLYSEDG 227

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
             D A  VF+ M  ++V+SW SLI G        EA++ F  M+  G+    V +++IL 
Sbjct: 228 CFDEALRVFDGMPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILP 287

Query: 446 ACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT 505
            CA +T L  G+++HAV +KS       V NSLV +YAKCG ++   RVF+ M  +D+ +
Sbjct: 288 VCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTS 347

Query: 506 WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMD 565
           W  LI G A NG+  EA++ + +M+  G  PD ITF+ LL  CSHAGLA++    FE M 
Sbjct: 348 WNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMK 407

Query: 566 KVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELG 625
             YGI P  +HYAC++D+LGR+G++ EA  ++  M  +P  ++W +LL++CR+HG++ L 
Sbjct: 408 MDYGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLA 467

Query: 626 ERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQ 685
           E  A  LFELEP NA  YV LSN+Y+ AG WE    VR+ M+ RG+ KE GCSW++  S+
Sbjct: 468 EAVAKRLFELEPNNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQIKSK 527

Query: 686 VHIFISEDRGHPLRTDIYSKI-DEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEK 744
           +H F++        +  Y K+   +M  ++E GYVPD    LH+V EE + + +  HSE+
Sbjct: 528 IHTFVAGGSNEFRNSVEYKKVWKRLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCGHSER 587

Query: 745 LAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCS 804
           LA  F L+    G PIRI KNLRVC DCH+ +K +S V  R I+LRD+NRFHHFK G CS
Sbjct: 588 LATMFALINTASGMPIRITKNLRVCVDCHSWVKTLSKVTGRVIVLRDTNRFHHFKDGVCS 647

Query: 805 CGDYW 809
           C DYW
Sbjct: 648 CKDYW 652



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 200/403 (49%), Gaps = 17/403 (4%)

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHV-----AWTTMITGYSQNGYGFKAIECFRDMRV 228
           L+ +++ C+ + EA    ++F DG   V      W  M  GYS+NGY  +A+  + +M  
Sbjct: 115 LITLFSVCRRVDEAR---RVFEDGGEDVDLPESVWVAMGIGYSRNGYPKEALLLYYEMVC 171

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
           +  +   F F   L AC+ +     G  VH  +L +  + +  V +AL+ +Y++ G  D 
Sbjct: 172 QFGQLGNFAFSMALKACSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFDE 231

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
           A R+ +     N VSWNS+I G  ++    EA+  F+ M  + +     T  ++L   A 
Sbjct: 232 ALRVFDGMPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCAR 291

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
              L + K +H++IVK+  +    V N+L+DMYAK G +D    VFN MQ KD+ SW +L
Sbjct: 292 VTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTL 351

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
           ITG A +G   EA++ F +M  SG  PD +   ++LS C+   + + G ++  +     G
Sbjct: 352 ITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDYG 411

Query: 469 CSSLSVDN--SLVLVYAKCGCINDANRVFDSMHTRDVIT-WTALIMGCAQNGKGKEALQF 525
            S  +V++   LV V  + G I +A  +  +M  +   + W +L+  C  +G    A   
Sbjct: 412 ISP-TVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAV 470

Query: 526 YDQM--LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDK 566
             ++  L      +Y+    +    ++AG+ E+ +   E M+K
Sbjct: 471 AKRLFELEPNNAGNYVMLSNIY---ANAGMWESVKVVREFMEK 510



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 118/240 (49%), Gaps = 2/240 (0%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
            Q+ +   D D    N ++  Y+  G   EA ++F+  P +N  +W+SLI G        
Sbjct: 202 AQVLKATEDPDQVVNNALLRLYSEDGCFDEALRVFDGMPHRNVVSWNSLIAGLVKKDGVF 261

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA E F  MQ +G   S  TL  +L +C+    L  G++ H   +K+    +A V+  LV
Sbjct: 262 EAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLV 321

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMYAKC  +     +F     GK+  +W T+ITGY+ NG   +A+E F++M   G   + 
Sbjct: 322 DMYAKCGAMDYCRRVFNGM-QGKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDG 380

Query: 236 FTFPSILTACAAVSARDFGAQVHGCI-LSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
            TF ++L+ C+     D G ++   + +  G    V   + L+D+  + G +  A  +++
Sbjct: 381 ITFIALLSGCSHAGLADDGCRLFEMMKMDYGISPTVEHYACLVDVLGRAGRIKEALEIVK 440



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 8/125 (6%)

Query: 16  RSKIIGPARYTHNV--GNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNT 72
           R   +G  +  H V   ++ KP + +  +LVD ++  G +D   ++F  M  +D  +WNT
Sbjct: 291 RVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNT 350

Query: 73  MIAAYANSGRLREAKKLFNETPFKNF----FTWSSLIYGYSNYGLDIEAFELFWQMQLE- 127
           +I  YA +GR+ EA + F E     F     T+ +L+ G S+ GL  +   LF  M+++ 
Sbjct: 351 LITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDY 410

Query: 128 GYRPS 132
           G  P+
Sbjct: 411 GISPT 415


>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
          Length = 666

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 252/671 (37%), Positives = 380/671 (56%), Gaps = 47/671 (7%)

Query: 148 LLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY--------LFKMFPDGKN 199
           +LQ     H   IKT      + ++ L++      CI    +        +F+   +  N
Sbjct: 2   ILQSLRMIHAQMIKTGLHNTNYALSKLIEF-----CILSPHFDGLPYAISVFETIQE-PN 55

Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG 259
            + W TM  G++ +     A++ +  M   G+  N +TFP +L +CA   A   G Q+HG
Sbjct: 56  LLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHG 115

Query: 260 CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE---------------------- 297
            +L  G + ++YV ++LI MY + G L+ A ++ + S                       
Sbjct: 116 HVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIEN 175

Query: 298 ---------IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
                    + + VSWN+MI G+A  G +KEAL LFK M   +++ D+ T  +V++  A 
Sbjct: 176 AQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 235

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
           +  +   + VHS I   GF     + NALID+Y+K G L+ A  +F  +  KDVISW +L
Sbjct: 236 SGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTL 295

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK--S 466
           I G  +   Y+EAL  F +M  SG  P+ V + SIL ACA L  ++ G+ +H    K   
Sbjct: 296 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK 355

Query: 467 GGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFY 526
           G  ++ S+  SL+ +YAKCG I  A++VF+S+  + + +W A+I G A +G+   +   +
Sbjct: 356 GVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIF 415

Query: 527 DQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGR 586
            +M   G +PD ITFVGLL ACSH+G+ +  R  F SM + Y + P  +HY CMIDLLG 
Sbjct: 416 SRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGH 475

Query: 587 SGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQL 646
           SG   EA+ +++ M  EPD  +W +LL AC++HG++ELGE  A NL ++EP N   YV L
Sbjct: 476 SGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLL 535

Query: 647 SNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKI 706
           SN+Y+TAG+W + A  R L+  +G++K PGCS +E +S VH FI  D+ HP   +IY  +
Sbjct: 536 SNIYATAGRWNEVANTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 595

Query: 707 DEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNL 766
           +E+ +L++EAG+VPD +  L  +EEE KE  L +HSEKLA+AFGL++   G  + I KNL
Sbjct: 596 EEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNL 655

Query: 767 RVCGDCHTAMK 777
           RVC +CH A K
Sbjct: 656 RVCRNCHEAYK 666



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 153/551 (27%), Positives = 260/551 (47%), Gaps = 70/551 (12%)

Query: 83  LREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRL 142
           L  A  +F      N   W+++  G++     + A +L+  M   G  P+ YT   +L+ 
Sbjct: 41  LPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKS 100

Query: 143 CSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF----------- 191
           C+     + G+Q HG+ +K   DL+ +V T L+ MY +   + +A  +F           
Sbjct: 101 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSY 160

Query: 192 -----------------KMFPD--GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
                            KMF +   K+ V+W  MI+GY++ G   +A+E F+DM    V 
Sbjct: 161 TALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 220

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
            ++ T  ++++ACA   + + G QVH  I   GF +N+ + +ALID+Y+KCG+L++A  L
Sbjct: 221 PDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGL 280

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
            E     + +SWN++I G+     +KEAL LF++M       +D T  S+L   A    +
Sbjct: 281 FEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 340

Query: 353 NNAKSVHSLIVK--TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           +  + +H  I K   G      +  +LIDMYAK G+++ A  VFN +  K + SW ++I 
Sbjct: 341 DIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIF 400

Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
           G A HG  + +   FS MR +GI PD +    +LSAC+   +L+ G+ +           
Sbjct: 401 GFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIF---------R 451

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
           S++ D  +       GC+ D                   ++G   +G  KEA +  + M 
Sbjct: 452 SMTQDYKMTPKLEHYGCMID-------------------LLG--HSGLFKEAEEMINTM- 489

Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKL 590
               +PD + +  LL AC   G  E    + +++ K+    PG   Y  + ++   +G+ 
Sbjct: 490 --EMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGS--YVLLSNIYATAGRW 545

Query: 591 IE---AKALLD 598
            E    +ALL+
Sbjct: 546 NEVANTRALLN 556



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 222/443 (50%), Gaps = 17/443 (3%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +  +G +++A ++F++   RD  ++  +I  YA+ G +  A+K+F+E P K+  +W+++I
Sbjct: 136 YVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMI 195

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            GY+  G   EA ELF  M     RP + T+  V+  C+  G ++ G Q H +     F 
Sbjct: 196 SGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFG 255

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            N  +V  L+D+Y+KC  +  A  LF+  P  K+ ++W T+I GY+      +A+  F++
Sbjct: 256 SNLKIVNALIDLYSKCGELETACGLFEGLPY-KDVISWNTLIGGYTHMNLYKEALLLFQE 314

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS--SGFEANVYVQSALIDMYAKC 283
           M   G   N  T  SIL ACA + A D G  +H  I     G      ++++LIDMYAKC
Sbjct: 315 MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKC 374

Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
           GD+++A ++       +  SWN+MI GFA  G    +  +F +M    I+ DD T+  +L
Sbjct: 375 GDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLL 434

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN-----ALIDMYAKQGNLDCAFMVFNLMQ 398
           +  + +  L+  +     I ++  + YK          +ID+    G    A  + N M+
Sbjct: 435 SACSHSGMLDLGRH----IFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTME 490

Query: 399 -DKDVISWTSLITGCAYHGSYEEALKYFSDM-RISGICP-DHVVVSSILSACAELTVLEF 455
            + D + W SL+  C  HG+ E    +  ++ +I    P  +V++S+I +       +  
Sbjct: 491 MEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVAN 550

Query: 456 GQQV--HAVFLKSGGCSSLSVDN 476
            + +       K  GCSS+ +D+
Sbjct: 551 TRALLNDKGMKKVPGCSSIEIDS 573


>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
          Length = 645

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 232/579 (40%), Positives = 342/579 (59%), Gaps = 3/579 (0%)

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
           N   + +IL +C    A   G Q+H  +L SG   +  + + L+D+YA CG +  ARR+ 
Sbjct: 67  NHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVF 126

Query: 294 -EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR-DIKIDDFTYPSVLNCFASNID 351
            E     N   WN +I  +AR G  + A+ L++ M A   +K D+FTYP VL   A+ +D
Sbjct: 127 DEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLD 186

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
           L+  + VH  +++T +    FV   LIDMYAK G +D A+ VFN    +D   W S+I  
Sbjct: 187 LSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAA 246

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
           C  +G   EAL    +M   GI P    + S +SA A  + L  G+++H    + G  S 
Sbjct: 247 CGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQ 306

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
             +  SL+ +YAK G +  A+ +F+ +  R++I+W A+I G   +G    A + + +M +
Sbjct: 307 DKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSRMRS 366

Query: 532 RG-TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKL 590
                PD+ITFVG+L AC+H G+ + A+  F+ M  VY IKP   HY C++D+LG SG+ 
Sbjct: 367 EAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGHSGRF 426

Query: 591 IEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMY 650
            EA  ++  M+ +PD+ +W ALL+ C++H ++EL E A   L ELEP +A  YV LSN+Y
Sbjct: 427 KEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALQKLIELEPEDAGNYVLLSNIY 486

Query: 651 STAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIM 710
           + +GKWE+AARVRKLM +RG++K   CSW+E   + H F+  D  HP   DIY +++ + 
Sbjct: 487 AESGKWEEAARVRKLMTNRGLKKIIACSWIELKGKFHGFLVGDASHPRSDDIYEELERLE 546

Query: 711 LLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCG 770
            LI + GYVPD     HNVE++ K   +  HSE+LA+AFGL++ P    + + KNLRVC 
Sbjct: 547 GLISQTGYVPDTTPVFHNVEDDEKRNMVWGHSERLAIAFGLISTPPRTKLLVTKNLRVCE 606

Query: 771 DCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           DCH  +K IS +  R II+RD NR+HHF  G CSC D+W
Sbjct: 607 DCHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 645



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 193/390 (49%), Gaps = 7/390 (1%)

Query: 131 PSQYTLDN---VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           PS Y   N   +LR C L   ++ G Q H   + +   L+A + T LVD+YA C  +  A
Sbjct: 63  PSPYNHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLA 122

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACA 246
             +F   P+  N   W  +I  Y+++G    AIE +R M   G ++ + FT+P +L ACA
Sbjct: 123 RRVFDEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACA 182

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
           A+     G +VH  ++ + +  +V+V + LIDMYAKCG +D A  +   + I +   WNS
Sbjct: 183 ALLDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNS 242

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           MI    + G   EAL+L + M A  I     T  S ++  A    L   + +H    + G
Sbjct: 243 MIAACGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRG 302

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
           F     +  +L+DMYAK G +  A ++F  +  +++ISW ++I G   HG  + A + FS
Sbjct: 303 FGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFS 362

Query: 427 DMRISG-ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC-SSLSVDNSLVLVYAK 484
            MR    + PDH+    +LSAC    +++  ++V  + +       ++     LV V   
Sbjct: 363 RMRSEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGH 422

Query: 485 CGCINDANRVFDSMHTR-DVITWTALIMGC 513
            G   +A+ V   M  + D   W AL+ GC
Sbjct: 423 SGRFKEASDVIKGMLVKPDSGIWGALLNGC 452



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 120/411 (29%), Positives = 193/411 (46%), Gaps = 23/411 (5%)

Query: 22  PARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSG 81
           P+ Y H+   ++  +  L+RA+      G    A +L    +  D      ++  YA+ G
Sbjct: 63  PSPYNHSNYATILRSCVLSRAV----RPGRQLHA-RLLVSGTGLDAVLATRLVDLYASCG 117

Query: 82  RLREAKKLFNETPFK-NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNV 139
            +  A+++F+E P + N F W+ LI  Y+  G    A EL+  M   G  +P  +T   V
Sbjct: 118 HVSLARRVFDEMPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPV 177

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG-- 197
           L+ C+    L  G + H   ++T +  + FV TGL+DMYAKC C+ EA   + +F D   
Sbjct: 178 LKACAALLDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEA---WAVFNDTTI 234

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           ++   W +MI    QNG   +A+   R+M  EG+     T  S ++A A  SA   G ++
Sbjct: 235 RDAAVWNSMIAACGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGREL 294

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           HG     GF +   ++++L+DMYAK G +  A  L E       +SWN+MI GF   G  
Sbjct: 295 HGYGWRRGFGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHA 354

Query: 318 KEALSLFKKMHAR-DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV-----KTGFEGYK 371
             A  LF +M +   +  D  T+  VL+       +  AK V  L+V     K   + Y 
Sbjct: 355 DHAFELFSRMRSEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHY- 413

Query: 372 FVNNALIDMYAKQGNL-DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
                L+D+    G   + + ++  ++   D   W +L+ GC  H + E A
Sbjct: 414 ---TCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELA 461


>gi|297841909|ref|XP_002888836.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297334677|gb|EFH65095.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 744

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 259/712 (36%), Positives = 386/712 (54%), Gaps = 31/712 (4%)

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT--CFDLNAFVVTGL 174
           A  LF+   +E    SQ+    + + C+ +  L+ G   H + +    C+  N  +   L
Sbjct: 45  ALSLFYCAPVE--LQSQHAYAALFQACADQRNLRDGINLHHHMLSHPYCYSQNVILANYL 102

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           + MYAKC  I  A  +F   P+ +N V+WT +ITGY+Q G        F  M       N
Sbjct: 103 ITMYAKCGNILYARQVFDTMPE-RNVVSWTALITGYAQAGNEQDGFCLFSSMLAHCC-PN 160

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR--- 291
           +F   S+LT C      + G QVHG  L  G   ++YV +ALI MY +C D  +A     
Sbjct: 161 EFALSSVLTLCR----YEPGKQVHGLALKLGLYCSIYVANALISMYGRCHDGTAAYEAWT 216

Query: 292 LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID 351
           + E  E  N V+WNSMI  F      K+A+ +F +MH+  +  D  T  ++      + D
Sbjct: 217 VFEAMEFKNLVTWNSMIAAFQCCNLGKQAIGVFMRMHSDGVGFDRATVLNICTTLYKSSD 276

Query: 352 LNNAK------SVHSLIVKTGFEGYKFVNNALIDMYAK-QGNL-DCAFMVFNLMQDKDVI 403
           L+  +       +HSL VK+G      V  AL+ +Y++  G   DC  +   +   +D++
Sbjct: 277 LDPDQVSKCCLQLHSLTVKSGLVTQTEVATALVKVYSEILGEFTDCYKLFMEMSHCRDIV 336

Query: 404 SWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVF 463
           +WT +IT  A +   E A+  F  +R   + PD    SS+L ACA L        +HA  
Sbjct: 337 AWTGIITAFAVYDP-ERAILLFGQLRHEKLSPDWYTFSSVLKACAGLVTARHALSIHAQV 395

Query: 464 LKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEAL 523
           +K G  +   V+NSL+  YAKCG ++   RVFD M +RDV++W +L+   + +G+    L
Sbjct: 396 IKGGFATDTVVNNSLIHAYAKCGSLDLCKRVFDDMDSRDVVSWNSLLKAYSLHGQVDSIL 455

Query: 524 QFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDL 583
             + +M     KPD  TF+ LL ACSHAG  +     F SM +     P  +HYAC+ID+
Sbjct: 456 PVFQKM---DIKPDSATFIALLSACSHAGRVKEGLRIFRSMFEKPETLPQLNHYACVIDM 512

Query: 584 LGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPY 643
           LGR+ +  EA+ ++ QM   PDA VW  LL +CR HG+ +LG+ AA+ L E+EP N++ Y
Sbjct: 513 LGRAERFAEAEEVIKQMPMGPDAVVWSTLLGSCRKHGNTQLGKLAADKLKEIEPTNSLSY 572

Query: 644 VQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIY 703
           +Q+SN+Y+    + +  +  K M++  +RKEPG S  E  ++VH F S  R  P R  I 
Sbjct: 573 IQMSNIYNAESSFNEGNKSIKEMETWRVRKEPGLSCTEIGNKVHEFTSGGRCRPDREAIC 632

Query: 704 SKIDEIMLLIKEAGYVPDMNFALHNVEE-EGKEIGLAYHSEKLAVAFGLLTLPQGAP--- 759
            +++ ++  +KE GYVP+M  AL  +EE E KE  L++HSEKLA+AF ++   +      
Sbjct: 633 RELERLISRLKEMGYVPEMRSALQQIEEDEQKEEHLSHHSEKLALAFAVMEGRKSGDCGV 692

Query: 760 --IRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             I+I KN+R+C DCH  MK  S +  + I+LRDSNRFHHFK  +CSC DYW
Sbjct: 693 NLIQIMKNIRICIDCHNFMKLASKLLGKEILLRDSNRFHHFKDSSCSCNDYW 744



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 224/463 (48%), Gaps = 23/463 (4%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +I  YA  G +  A+++F+  P +N  +W++LI GY+  G + + F LF  M L    
Sbjct: 100 NYLITMYAKCGNILYARQVFDTMPERNVVSWTALITGYAQAGNEQDGFCLFSSM-LAHCC 158

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC---KCIFEA 187
           P+++ L +VL LC      + G+Q HG A+K     + +V   L+ MY +C      +EA
Sbjct: 159 PNEFALSSVLTLCR----YEPGKQVHGLALKLGLYCSIYVANALISMYGRCHDGTAAYEA 214

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F+   + KN V W +MI  +     G +AI  F  M  +GV  ++ T  +I T    
Sbjct: 215 WTVFEAM-EFKNLVTWNSMIAAFQCCNLGKQAIGVFMRMHSDGVGFDRATVLNICTTLYK 273

Query: 248 VSARDFGA------QVHGCILSSGFEANVYVQSALIDMYAKC-GDL-DSARRLLEYSEID 299
            S  D         Q+H   + SG      V +AL+ +Y++  G+  D  +  +E S   
Sbjct: 274 SSDLDPDQVSKCCLQLHSLTVKSGLVTQTEVATALVKVYSEILGEFTDCYKLFMEMSHCR 333

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           + V+W  +I  FA     + A+ LF ++    +  D +T+ SVL   A  +   +A S+H
Sbjct: 334 DIVAWTGIITAFAVYDPER-AILLFGQLRHEKLSPDWYTFSSVLKACAGLVTARHALSIH 392

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
           + ++K GF     VNN+LI  YAK G+LD    VF+ M  +DV+SW SL+   + HG  +
Sbjct: 393 AQVIKGGFATDTVVNNSLIHAYAKCGSLDLCKRVFDDMDSRDVVSWNSLLKAYSLHGQVD 452

Query: 420 EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV-HAVFLKSGGCSSLSVDNSL 478
             L  F  M I    PD     ++LSAC+    ++ G ++  ++F K      L+    +
Sbjct: 453 SILPVFQKMDIK---PDSATFIALLSACSHAGRVKEGLRIFRSMFEKPETLPQLNHYACV 509

Query: 479 VLVYAKCGCINDANRVFDSMHT-RDVITWTALIMGCAQNGKGK 520
           + +  +     +A  V   M    D + W+ L+  C ++G  +
Sbjct: 510 IDMLGRAERFAEAEEVIKQMPMGPDAVVWSTLLGSCRKHGNTQ 552


>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 219/527 (41%), Positives = 321/527 (60%), Gaps = 10/527 (1%)

Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
           D D+  R++++  I           G+ R    +  + ++ +M  + +  + FTYP ++ 
Sbjct: 51  DNDAMGRVIKFCAISKS--------GYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIR 102

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM--QDKDV 402
               +  +   K +H+ ++K GF    F  N LI MY    +L+ A  VF+ M  +D++ 
Sbjct: 103 ACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNS 162

Query: 403 ISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAV 462
           +SW ++I          EA   F  MR+  +  D  V +S+LSAC  L  LE G+ +H  
Sbjct: 163 VSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGY 222

Query: 463 FLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEA 522
             KSG      +  +++ +Y KCGC+  A+ VF+ +  + + +W  +I G A +GKG+ A
Sbjct: 223 IEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAA 282

Query: 523 LQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMID 582
           ++ + +M      PD ITFV +L AC+H+GL E  + YF+ M +V G+KPG +H+ CM+D
Sbjct: 283 IELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVD 342

Query: 583 LLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           LLGR+G L EA+ L+++M   PDA V  AL+ ACR+HG+ ELGE+    + ELEP N+  
Sbjct: 343 LLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGR 402

Query: 643 YVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDI 702
           YV L+N+Y++AG+WED A+VRKLM  RG++K PG S +E+ S V  FI+  R HP   +I
Sbjct: 403 YVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEI 462

Query: 703 YSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRI 762
           Y+K+DEI+  I+  GYVPD +  LH+++EE KE  L YHSEKLA+AFGLL    G  +RI
Sbjct: 463 YAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIAFGLLKTKPGETLRI 522

Query: 763 FKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            KNLR+C DCH A K IS VY R II+RD NRFHHF+ G CSC DYW
Sbjct: 523 SKNLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKDYW 569



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 152/322 (47%), Gaps = 20/322 (6%)

Query: 208 TGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFE 267
           +GY +       I  +  M  + V  N+FT+P ++ AC    A + G Q+H  +L  GF 
Sbjct: 67  SGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFG 126

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEY--SEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
           A+ +  + LI MY     L+ ARR+ +       N VSWN+MI  + +     EA +LF 
Sbjct: 127 ADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFD 186

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQG 385
           +M   ++ +D F   S+L+       L   K +H  I K+G E    +   +IDMY K G
Sbjct: 187 RMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCG 246

Query: 386 NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
            L+ A  VFN +  K + SW  +I G A HG  E A++ F +M    + PD +   ++LS
Sbjct: 247 CLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLS 306

Query: 446 ACAELTVLEFGQQ-----VHAVFLKSG----GCSSLSVDNSLVLVYAKCGCINDANRVFD 496
           ACA   ++E G+         + LK G    GC        +V +  + G + +A ++ +
Sbjct: 307 ACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGC--------MVDLLGRAGLLEEARKLIN 358

Query: 497 SMHTR-DVITWTALIMGCAQNG 517
            M    D     AL+  C  +G
Sbjct: 359 EMPVNPDAGVLGALVGACRIHG 380



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 190/423 (44%), Gaps = 57/423 (13%)

Query: 107 GYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDL 166
           GY  + L      ++ +M  +   P+++T   ++R C +   ++ G+Q H + +K  F  
Sbjct: 68  GYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGA 127

Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPD-GKNHVAWTTMITGYSQNGYGFKAIECFRD 225
           + F +  L+ MY   + + +A  +F   P   +N V+W  MI  Y Q+    +A   F  
Sbjct: 128 DGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDR 187

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           MR+E V  ++F   S+L+AC  + A + G  +HG I  SG E +  + + +IDMY KCG 
Sbjct: 188 MRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGC 247

Query: 286 LDSARRLLEYSEIDNEV------SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           L+ A      SE+ NE+      SWN MI G A  G  + A+ LFK+M    +  D  T+
Sbjct: 248 LEKA------SEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITF 301

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
            +VL+  A           HS +V+ G   ++++   L         L      F  M D
Sbjct: 302 VNVLSACA-----------HSGLVEEGKHYFQYMTEVL--------GLKPGMEHFGCMVD 342

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
                    + G A  G  EEA K  ++M ++   PD  V+ +++ AC      E G+Q+
Sbjct: 343 ---------LLGRA--GLLEEARKLINEMPVN---PDAGVLGALVGACRIHGNTELGEQI 388

Query: 460 HAVFLKSGGCSSLSVDNS-----LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCA 514
               ++      L   NS     L  +YA  G   D  +V   M+ R V       M  +
Sbjct: 389 GKKVIE------LEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIES 442

Query: 515 QNG 517
           ++G
Sbjct: 443 ESG 445



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 130/251 (51%), Gaps = 4/251 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFK--NFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           DGF+ N +I  Y N   L +A+++F+  P +  N  +W+++I  Y       EAF LF +
Sbjct: 128 DGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDR 187

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+LE     ++   ++L  C+  G L++G+  HGY  K+  +L++ + T ++DMY KC C
Sbjct: 188 MRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGC 247

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A  +F   P  K   +W  MI G + +G G  AIE F++M  E V  +  TF ++L+
Sbjct: 248 LEKASEVFNELPQ-KGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLS 306

Query: 244 ACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           ACA     + G      +    G +  +     ++D+  + G L+ AR+L+    ++ + 
Sbjct: 307 ACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDA 366

Query: 303 SWNSMIVGFAR 313
                +VG  R
Sbjct: 367 GVLGALVGACR 377


>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
 gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
          Length = 710

 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 242/653 (37%), Positives = 362/653 (55%), Gaps = 70/653 (10%)

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC---------------K 182
            +L LC      +     HG  I+T F    F+   L+D+Y KC               +
Sbjct: 29  KLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSER 88

Query: 183 CIF----------------EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
            +F                E+ +LF + P+ K+  +W +MI G++Q+    +A++ F  M
Sbjct: 89  NVFSFNSIISTLMRWGFVDESAWLFSLMPE-KDQCSWNSMIAGFAQHDRFEEALDWFVRM 147

Query: 227 RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDL 286
             +    N ++F S L+AC+ +     GAQ+HG I  S +  +V++ S LID Y+KCG +
Sbjct: 148 HRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLV 207

Query: 287 DSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCF 346
             ARR+ +  E  N VSWN +I  + + G   EAL  F +M     K D+ T  SV++  
Sbjct: 208 GCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSAC 267

Query: 347 ASNIDLNNAKSVHSLIVKTG-FEGYKFVNNALIDMYAKQGNLDCAFMVFNLM-------- 397
           A+         +H+ +VK+  F     + NAL+DMYAK G ++ A  VF+ M        
Sbjct: 268 ATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSE 327

Query: 398 -----------------------QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
                                  + KD++SW +LI G   +G  EEAL  F  ++   +C
Sbjct: 328 TTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVC 387

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLK------SGGCSSLSVDNSLVLVYAKCGCI 488
           P H    ++L+A A L  LE G+Q H+  +K      SG    + V NSL+ +Y KCG +
Sbjct: 388 PTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSV 447

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
            +  RVF++M  +D ++W  +I+G AQNG G EAL+ + +ML  G KPD++T +G L AC
Sbjct: 448 EEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCAC 507

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           SHAGL E  R YF SM K +G+ P  DHY CM+DLLGR+G L EAK L++ M  +PDA V
Sbjct: 508 SHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVV 567

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           W +LLSAC+VH ++ LG+  A  +FE++P ++ PYV L+NMYS  G+W DA  VRKLM+ 
Sbjct: 568 WSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRR 627

Query: 669 RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPD 721
           RG+ K+PGCSW++  S VH+F+ +D+ HP + +IYS +  +   +++AGYVPD
Sbjct: 628 RGVVKQPGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHMRQAGYVPD 680



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 160/516 (31%), Positives = 272/516 (52%), Gaps = 45/516 (8%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           NR +  +   G +D A ++F++MS+R+ F++N++I+     G + E+  LF+  P K+  
Sbjct: 63  NRLIDVYGKCGYLDYARKVFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQC 122

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           +W+S+I G++ +    EA + F +M  + +  + Y+  + L  CS    L+ G Q HG  
Sbjct: 123 SWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLI 182

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
            K+ + L+ F+ +GL+D Y+KC  +  A  +F    + KN V+W  +IT Y QNG   +A
Sbjct: 183 SKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEE-KNVVSWNCLITCYEQNGPAIEA 241

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG-FEANVYVQSALID 278
           +E F  M   G + ++ T  S+++ACA ++A   G Q+H  ++ S  F  ++ + +AL+D
Sbjct: 242 LEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVD 301

Query: 279 MYAKCGDLDSARRLLEYSEIDNE-------------------------------VSWNSM 307
           MYAKCG ++ AR + +   + N                                VSWN++
Sbjct: 302 MYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNAL 361

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I G+ + G ++EAL LF+ +    +    +T+ ++LN  A+  DL   +  HS +VK GF
Sbjct: 362 IAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGF 421

Query: 368 ------EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
                 E   FV N+LIDMY K G+++    VF  M +KD +SW ++I G A +G   EA
Sbjct: 422 RFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEA 481

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS---L 478
           L+ F  M  SG  PDHV +   L AC+   ++E G++      K  G   L V +    +
Sbjct: 482 LELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGL--LPVKDHYTCM 539

Query: 479 VLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
           V +  + GC+ +A  + +SM  + D + W++L+  C
Sbjct: 540 VDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSAC 575



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 137/445 (30%), Positives = 212/445 (47%), Gaps = 71/445 (15%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR------ 291
           F  +L  C  + +      VHG ++ + F   V++Q+ LID+Y KCG LD AR+      
Sbjct: 27  FAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMS 86

Query: 292 -------------LLEYSEID------------NEVSWNSMIVGFARQGFHKEALSLFKK 326
                        L+ +  +D            ++ SWNSMI GFA+    +EAL  F +
Sbjct: 87  ERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVR 146

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
           MH  D  ++D+++ S L+  +   DL     +H LI K+ +    F+ + LID Y+K G 
Sbjct: 147 MHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGL 206

Query: 387 LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSA 446
           + CA  VF+ M++K+V+SW  LIT    +G   EAL+ F  M   G  PD V ++S++SA
Sbjct: 207 VGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSA 266

Query: 447 CAELTVLEFGQQVHAVFLKSGGC-SSLSVDNSLVLVYAKCGCINDANRVFDSMHTR---- 501
           CA L   + G Q+HA  +KS    + L + N+LV +YAKCG +N+A  VFD M  R    
Sbjct: 267 CATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVS 326

Query: 502 ---------------------------DVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
                                      D+++W ALI G  QNG+ +EAL  +  +     
Sbjct: 327 ETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESV 386

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIK----PGPDHYA--CMIDLLGRSG 588
            P + TF  LL A ++    E  R     + K +G +      PD +    +ID+  + G
Sbjct: 387 CPTHYTFGNLLNASANLADLELGRQAHSHVVK-HGFRFQSGEEPDIFVGNSLIDMYMKCG 445

Query: 589 KLIEAKALLDQMVGEPDATVWKALL 613
            + E   + + MV E D   W  ++
Sbjct: 446 SVEEGLRVFENMV-EKDHVSWNTMI 469



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 93/198 (46%), Gaps = 17/198 (8%)

Query: 20  IGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
           + P  YT   GN +  +++L    +       + + G  F+   + D F  N++I  Y  
Sbjct: 386 VCPTHYT--FGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMK 443

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
            G + E  ++F     K+  +W+++I GY+  G  +EA ELF +M   G +P   T+   
Sbjct: 444 CGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGT 503

Query: 140 LRLCSLKGLLQRGEQF-------HG-YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
           L  CS  GL++ G ++       HG   +K  +       T +VD+  +  C+ EA+ L 
Sbjct: 504 LCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHY-------TCMVDLLGRAGCLEEAKDLI 556

Query: 192 KMFPDGKNHVAWTTMITG 209
           +  P   + V W+++++ 
Sbjct: 557 ESMPKQPDAVVWSSLLSA 574


>gi|302785251|ref|XP_002974397.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
 gi|300157995|gb|EFJ24619.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
          Length = 679

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/677 (35%), Positives = 372/677 (54%), Gaps = 41/677 (6%)

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
            V++ C+  G L  G + H    +     + +V   LV MY KC  + EA  +F+  P  
Sbjct: 39  RVIQSCARLGALAEGRRIHQLMRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATP-A 97

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDF---G 254
           KN  +WT +IT  +Q+G   +A+  F +M  +G++ +  +F + + AC+A    +F   G
Sbjct: 98  KNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSA--GPEFLPAG 155

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
             +H  +   GF+  V   ++L+ MY+KCG L+ + R  E     N VSWN+MI  FA  
Sbjct: 156 RALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESMRTFESMTEPNAVSWNAMIAAFAEH 215

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
               EAL   +KM                        L   ++   ++V T         
Sbjct: 216 RRGLEALRTLQKMF-----------------------LEGIRACSDVVVGT--------- 243

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
             L++MYAK   L  A   F  +Q+ ++I+W  LI+    H  ++EA++ F  M + G+ 
Sbjct: 244 -TLVNMYAKCSGLHDANAAFVKLQEPNIITWNVLISAYVQHCCFKEAMELFRRMLLLGLE 302

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCINDANR 493
            D V   +IL AC     LE G+ +HA   +    S+   ++N ++ +Y KCG + DA  
Sbjct: 303 MDEVTFINILGACCVPVALEDGRAIHACVREHPLASNHAPLENVILNMYGKCGSLQDAEA 362

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA-CSHAG 552
           +F SM   DVI W  +I    Q+G   EAL+FY+ M   G  PD  T+V ++ A C++AG
Sbjct: 363 MFKSMSQPDVIAWNTMIAAYGQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDASCANAG 422

Query: 553 LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
           L E A  YF SM + +G++PG  HY CM++ LG++G+L +A+ L+  M  EPD   W + 
Sbjct: 423 LPEEAHAYFVSMQQDHGVRPGGGHYGCMVESLGKAGRLSDAETLIQCMPFEPDVLTWTSF 482

Query: 613 LSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIR 672
           L+ CR HGD++ G+ AA     ++P  +  YV L+ +++ AG +++A+R+RKLM  RGIR
Sbjct: 483 LANCRSHGDMKRGKLAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLMLDRGIR 542

Query: 673 KEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEE 732
           K  G S ++  + V+ F + D+ +P   +I+ ++  +   +K AGY PDM    H+VE  
Sbjct: 543 KNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKSAGYDPDMAHVAHDVEAG 602

Query: 733 GKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDS 792
            KE  L  HSE+LA+AFG+++   G P+RI KNLRVCGDCHT  K  S +  R II+RDS
Sbjct: 603 QKEPLLFAHSERLAIAFGIISTSPGTPLRIMKNLRVCGDCHTMTKLTSKITRREIIVRDS 662

Query: 793 NRFHHFKAGNCSCGDYW 809
           NRFHHFK G+CSC D+W
Sbjct: 663 NRFHHFKNGSCSCKDFW 679



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 213/468 (45%), Gaps = 55/468 (11%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +  N ++  Y   G L EA+ +F  TP KN F+W+ LI   + +G   EA  LF++M 
Sbjct: 68  DVYVSNHLVMMYGKCGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALALFYEML 127

Query: 126 LEGYRPSQYTLDNVLRLCSL-KGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
            +G +P   +    +  CS     L  G   H    +  F       T LV MY+KC  +
Sbjct: 128 KQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSL 187

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            E+   F+   +  N V+W  MI  ++++  G +A+   + M +EG+            A
Sbjct: 188 EESMRTFESMTE-PNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIR-----------A 235

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C                      ++V V + L++MYAKC  L  A       +  N ++W
Sbjct: 236 C----------------------SDVVVGTTLVNMYAKCSGLHDANAAFVKLQEPNIITW 273

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N +I  + +    KEA+ LF++M    +++D+ T+ ++L      + L + +++H+ + +
Sbjct: 274 NVLISAYVQHCCFKEAMELFRRMLLLGLEMDEVTFINILGACCVPVALEDGRAIHACVRE 333

Query: 365 TGF-EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
                 +  + N +++MY K G+L  A  +F  M   DVI+W ++I     HG   EAL+
Sbjct: 334 HPLASNHAPLENVILNMYGKCGSLQDAEAMFKSMSQPDVIAWNTMIAAYGQHGHTSEALR 393

Query: 424 YFSDMRISGICP-DHVVVSSILSACAELTVLEFG-------QQVHAVFLKSG--GCSSLS 473
           ++  M+  G+ P D+  VS I ++CA   + E         QQ H V    G  GC    
Sbjct: 394 FYELMQEEGVVPDDYTYVSVIDASCANAGLPEEAHAYFVSMQQDHGVRPGGGHYGC---- 449

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMGCAQNGKGK 520
               +V    K G ++DA  +   M    DV+TWT+ +  C  +G  K
Sbjct: 450 ----MVESLGKAGRLSDAETLIQCMPFEPDVLTWTSFLANCRSHGDMK 493



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 6/92 (6%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF----NETPFKNFFTW 101
           +   G + +A  +F+ MS  D   WNTMIAAY   G   EA + +     E    + +T+
Sbjct: 351 YGKCGSLQDAEAMFKSMSQPDVIAWNTMIAAYGQHGHTSEALRFYELMQEEGVVPDDYTY 410

Query: 102 SSLI-YGYSNYGLDIEAFELFWQMQLE-GYRP 131
            S+I    +N GL  EA   F  MQ + G RP
Sbjct: 411 VSVIDASCANAGLPEEAHAYFVSMQQDHGVRP 442


>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
 gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
          Length = 615

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 226/572 (39%), Positives = 338/572 (59%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
              ++  CA   A + G ++H  + S   +   ++ + L+DMY KCG L  A+R+ +  +
Sbjct: 44  LEQLIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQ 103

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
             N  SW  ++ GF + G   EA+ LF +M       D       ++   +   L+  + 
Sbjct: 104 HKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGRE 163

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           +HS     G +      NA+I+MY K G++  AF VF  M +K+VISW+++I     +  
Sbjct: 164 IHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNEL 223

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
            +EAL +F  M+  G+  D +   S+L A   +  LE G+ +H   + +G  +S+ V N+
Sbjct: 224 ADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNT 283

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
           LV +Y KCG  +DA  VFDSM  ++V++W A++    QNG+ +EAL  +D M   G +P+
Sbjct: 284 LVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPN 343

Query: 538 YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALL 597
            ITFV +L+ CSH+G  ++A  +F  M + +GI P   H+ C+ID+LGRSGKL EA+ L+
Sbjct: 344 DITFVTILYCCSHSGKFKDAVSHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEELI 403

Query: 598 DQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWE 657
             M    DA +W +LL AC  H D +   RAA   F+ EP  A  Y+ LSN+Y+   KW+
Sbjct: 404 QAMPVPADAVLWTSLLCACVTHKDEDRAARAAEEAFQREPRCAAAYIMLSNLYAALKKWD 463

Query: 658 DAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAG 717
           +AA+VRK M+  G+RK+ G SW+E + QVH F++ D  HP ++ I+  +  +M  ++  G
Sbjct: 464 EAAKVRKRMEQAGVRKQAGRSWIEIDKQVHEFVAGDSIHPDKSRIFKTLQRLMSEMRIKG 523

Query: 718 YVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMK 777
           Y PD    +H++EEE K+  L YHSEKLAVAFG+ + P   P+ I KNLRVC DCH+A+K
Sbjct: 524 YEPDRKVVIHSMEEEEKDEVLFYHSEKLAVAFGIASTPPRTPLCIVKNLRVCSDCHSAIK 583

Query: 778 YISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +IS V  R I +RDSNRFHHF  G CSCGDYW
Sbjct: 584 FISGVEGRRITVRDSNRFHHFDRGECSCGDYW 615



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 184/355 (51%), Gaps = 5/355 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           DR  F  N ++  Y   G L EAK++F+    KN F+W+ L+ G+   G  +EA +LF +
Sbjct: 73  DRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHR 132

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M  EG  P +  L   +  C     L +G + H  A     D +      +++MY KC  
Sbjct: 133 MCQEGELPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGS 192

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I EA  +F   P+ KN ++W+TMI  + QN    +A+  F+ M+ EG+E ++ T+ S+L 
Sbjct: 193 IGEAFAVFTRMPE-KNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLD 251

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           A  +V A + G  +H  I+ +G + ++ V + L++MY KCG  D AR + +     N VS
Sbjct: 252 AYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVS 311

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WN+M+  + + G  +EAL+LF  M    ++ +D T+ ++L C + +    +A S H + +
Sbjct: 312 WNAMLAAYGQNGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVS-HFVEM 370

Query: 364 KT--GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYH 415
           +   G    +     LIDM  + G L+ A  +   M    D + WTSL+  C  H
Sbjct: 371 RQDFGITPREVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCACVTH 425



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/380 (28%), Positives = 185/380 (48%), Gaps = 3/380 (0%)

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
           L+ ++R C+    L+ G + H +      D   F+   LVDMY KC  + EA+ +F    
Sbjct: 44  LEQLIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVDMYGKCGSLVEAKRVFDAMQ 103

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGA 255
             KN  +WT ++ G+ Q+G G +AI+ F  M  EG   ++      + +C A  A   G 
Sbjct: 104 H-KNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGR 162

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           ++H    S G ++++   +A+I+MY KCG +  A  +       N +SW++MI  F +  
Sbjct: 163 EIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMPEKNVISWSTMIAAFCQNE 222

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
              EAL  FK M    +++D  TY SVL+ + S   L   K++H  IV  G +    V N
Sbjct: 223 LADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGN 282

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
            L++MY K G+ D A  VF+ M +K+V+SW +++     +G   EAL  F  M + G+ P
Sbjct: 283 TLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRP 342

Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD-NSLVLVYAKCGCINDANRV 494
           + +   +IL  C+     +          +  G +   V    L+ +  + G + +A  +
Sbjct: 343 NDITFVTILYCCSHSGKFKDAVSHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEEL 402

Query: 495 FDSMHT-RDVITWTALIMGC 513
             +M    D + WT+L+  C
Sbjct: 403 IQAMPVPADAVLWTSLLCAC 422



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 68/164 (41%), Gaps = 34/164 (20%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +   G  D+A  +F+ M +++  +WN M+AAY  +GR REA  LF+              
Sbjct: 288 YGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFD-------------- 333

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                             M LEG RP+  T   +L  CS  G  +     H   ++  F 
Sbjct: 334 -----------------SMDLEGVRPNDITFVTILYCCSHSGKFKDAVS-HFVEMRQDFG 375

Query: 166 LNAFVV--TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
           +    V    L+DM  +   + EAE L +  P   + V WT+++
Sbjct: 376 ITPREVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLL 419


>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Brachypodium distachyon]
          Length = 802

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 222/553 (40%), Positives = 347/553 (62%), Gaps = 1/553 (0%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
            + + +TACA     D   ++H  + SS F  + ++ ++LI +Y KCG +  A ++ +  
Sbjct: 53  VYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKM 112

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              + VSW S+I G+A+     EA+ L   M     K + FT+ S+L    +  D     
Sbjct: 113 RNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGG 172

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H+L VK  +    +V +AL+DMYA+ G +D A  VF+ +  K+ +SW +LI+G A  G
Sbjct: 173 QIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKG 232

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
             E AL  F++M+ +G    H   SSI SA A +  LE G+ VHA  +KS    +  V N
Sbjct: 233 DGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGN 292

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           +++ +YAK G + DA +VF+ +  +D++TW +++   AQ G GKEA+  +++M   G   
Sbjct: 293 TMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYL 352

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           + I+F+ +L ACSH GL +  + YF+ M K Y ++P  +HY  ++DLLGR+G L  A   
Sbjct: 353 NQISFLCILTACSHGGLVKEGKHYFD-MIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVF 411

Query: 597 LDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
           + +M  EP A VW ALL+ACR+H + ++G+ AA+++F+L+P ++ P V L N+Y++ G W
Sbjct: 412 IFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHW 471

Query: 657 EDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA 716
           + AARVRK+MK+ G++KEP CSWVE  + VH+F++ D  HP   +IY   DEI + I++ 
Sbjct: 472 DAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRAEEIYKMWDEISMKIRKE 531

Query: 717 GYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAM 776
           GYVPDM++ L +V+E+ +E  L YHSEK+A+AF L+ +P GA IRI KN+R+CGDCH+A 
Sbjct: 532 GYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGATIRIMKNIRICGDCHSAF 591

Query: 777 KYISAVYLRHIIL 789
           KYIS V+ R I++
Sbjct: 592 KYISKVFEREIVI 604



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 199/391 (50%), Gaps = 2/391 (0%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P+       +  C+    L    + H +   + F  +AF+   L+ +Y KC  + EA  +
Sbjct: 49  PTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKV 108

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F    + K+ V+WT++I GY+QN    +AI     M     + N FTF S+L A  A + 
Sbjct: 109 FDKMRN-KDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYAD 167

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
              G Q+H   +   +  +VYV SAL+DMYA+CG +D A  + +  +  N VSWN++I G
Sbjct: 168 SGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISG 227

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           FAR+G  + AL +F +M     +   FTY S+ +  A    L   K VH+ ++K+  +  
Sbjct: 228 FARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLT 287

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
            FV N ++DMYAK G++  A  VF  + +KD+++W S++T  A +G  +EA+ +F +MR 
Sbjct: 288 AFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRK 347

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
           SGI  + +    IL+AC+   +++ G+    +  +      +    ++V +  + G +N 
Sbjct: 348 SGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNY 407

Query: 491 ANR-VFDSMHTRDVITWTALIMGCAQNGKGK 520
           A   +F          W AL+  C  +   K
Sbjct: 408 ALVFIFKMPMEPTAAVWGALLAACRMHKNAK 438



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 189/374 (50%), Gaps = 6/374 (1%)

Query: 47  SNSGEIDEAGQLFEKMSDR----DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWS 102
           + S  +D+A ++   ++      D F  N++I  Y   G + EA K+F++   K+  +W+
Sbjct: 62  AQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNKDMVSWT 121

Query: 103 SLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT 162
           SLI GY+   +  EA  L   M    ++P+ +T  ++L+          G Q H  A+K 
Sbjct: 122 SLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIHALAVKC 181

Query: 163 CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIEC 222
            +  + +V + L+DMYA+C  +  A  +F    D KN V+W  +I+G+++ G G  A+  
Sbjct: 182 DWHEDVYVGSALLDMYARCGKMDMATAVFDKL-DSKNGVSWNALISGFARKGDGETALMV 240

Query: 223 FRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK 282
           F +M+  G E+  FT+ SI +A A + A + G  VH  ++ S  +   +V + ++DMYAK
Sbjct: 241 FAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAK 300

Query: 283 CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
            G +  AR++ E     + V+WNSM+  FA+ G  KEA+S F++M    I ++  ++  +
Sbjct: 301 SGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFLCI 360

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM-VFNLMQDKD 401
           L   +    +   K    +I +   E        ++D+  + G L+ A + +F +  +  
Sbjct: 361 LTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPT 420

Query: 402 VISWTSLITGCAYH 415
              W +L+  C  H
Sbjct: 421 AAVWGALLAACRMH 434



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 148/306 (48%), Gaps = 7/306 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +  + ++  YA  G++  A  +F++   KN  +W++LI G++  G    A  +F +MQ
Sbjct: 186 DVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQ 245

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G+  + +T  ++    +  G L++G+  H + IK+   L AFV   ++DMYAK   + 
Sbjct: 246 RNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMI 305

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A  +F+   + K+ V W +M+T ++Q G G +A+  F +MR  G+  NQ +F  ILTAC
Sbjct: 306 DARKVFERVLN-KDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILTAC 364

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-W 304
           +       G      I     E  +     ++D+  + G L+ A   +    ++   + W
Sbjct: 365 SHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVW 424

Query: 305 NSMIVGFARQGFHKEA-LSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLI 362
            +++   A    HK A +  F   H   +  DD   P +L N +AS    + A  V  ++
Sbjct: 425 GALL---AACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMM 481

Query: 363 VKTGFE 368
             TG +
Sbjct: 482 KATGVK 487



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 24/202 (11%)

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
           + P   V  + ++ACA+   L+  +++HA    S       +DNSL+ +Y KCG + +A+
Sbjct: 47  LAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAH 106

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS--- 549
           +VFD M  +D+++WT+LI G AQN    EA+     ML    KP+  TF  LL A     
Sbjct: 107 KVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYA 166

Query: 550 --------HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
                   HA LA    W+    + VY         + ++D+  R GK+  A A+ D++ 
Sbjct: 167 DSGIGGQIHA-LAVKCDWH----EDVYV-------GSALLDMYARCGKMDMATAVFDKLD 214

Query: 602 GEPDATVWKALLSACRVHGDLE 623
            + +   W AL+S     GD E
Sbjct: 215 SK-NGVSWNALISGFARKGDGE 235



 Score = 46.2 bits (108), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 14/217 (6%)

Query: 25  YTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRL 83
           + H + +  K  + +   ++D ++ SG + +A ++FE++ ++D  TWN+M+ A+A  G  
Sbjct: 276 HAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLG 335

Query: 84  REAKKLFNETP----FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
           +EA   F E      + N  ++  ++   S+ GL  E    F  ++     P       V
Sbjct: 336 KEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTV 395

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV---DMYAKCKC-IFEAEYLFKMFP 195
           + L    GLL     F     K   +  A V   L+    M+   K   F A+++F++ P
Sbjct: 396 VDLLGRAGLLNYALVF---IFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDP 452

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
           D          I  Y+  G+   A    + M+  GV+
Sbjct: 453 DDSGPPVLLYNI--YASTGHWDAAARVRKMMKATGVK 487


>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Brachypodium distachyon]
          Length = 689

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 249/663 (37%), Positives = 382/663 (57%), Gaps = 6/663 (0%)

Query: 152 GEQFHGYAIKTCFD-LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
           G   H  A++     L  F+   LV++Y+K      A       P+    V++T  I+G 
Sbjct: 28  GRAAHARALRLLSPGLPPFICAHLVNLYSKLDLPAAAASALASDPN-PTVVSFTAFISGA 86

Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSIL--TACAAVSARDFGAQVHGCILSSGF-E 267
           +Q+     A+  F  M   G+  N FTFPS     ACA       G Q+H   L  G+  
Sbjct: 87  AQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQIHALALRFGYLP 146

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM 327
            + +V  A +DMY K G L  ARRL E     N ++WN+++      G   E    +  +
Sbjct: 147 GDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAYFGL 206

Query: 328 HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL 387
                  +  +  +  N  A  + L+  +  H  +V  GF+    V+NA++D Y K    
Sbjct: 207 REAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRCA 266

Query: 388 DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSAC 447
             A  VF+ M+ ++ +SW S+I   A HG+ E+AL  +   R +G  P   +VSS+L+ C
Sbjct: 267 GKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTC 326

Query: 448 AELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWT 507
           A L  L FG+ +HAV ++S   +++ V ++LV +Y KCG + DA +VF  M  R+++TW 
Sbjct: 327 AGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWN 386

Query: 508 ALIMGCAQNGKGKEALQFYDQML-ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDK 566
           A+I G A  G  + AL  +D M+ + GT P++IT V ++ ACS  GL ++    F++M +
Sbjct: 387 AMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTMRE 446

Query: 567 VYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGE 626
            +G++P  +HYAC++DLLGR+G    A  ++ +M   P  +VW ALL AC++HG  ELG 
Sbjct: 447 RFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALLGACKMHGKTELGR 506

Query: 627 RAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQV 686
            A+  LFEL+P ++  +V LSNM ++AG+W +A  VRK MK+ GI+KEPGCSW+   + V
Sbjct: 507 IASEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKEPGCSWITWKNVV 566

Query: 687 HIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLA 746
           H+F ++D  H   ++I + + ++   ++ +GY+PD  ++L++VEEE KE  +  HSEKLA
Sbjct: 567 HVFYAKDTKHDRNSEIQALLAKLKKQMQASGYMPDTQYSLYDVEEEEKETEVFQHSEKLA 626

Query: 747 VAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCG 806
           +AFGL+ +P   PIRI KNLR+C DCH A K++S +  R II+RD+NRFH+FK   CSC 
Sbjct: 627 LAFGLIHIPPSVPIRITKNLRICVDCHRAFKFVSGIVGREIIVRDNNRFHYFKQFECSCK 686

Query: 807 DYW 809
           DYW
Sbjct: 687 DYW 689



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/433 (28%), Positives = 212/433 (48%), Gaps = 22/433 (5%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F     +  Y  +G L  A++LF E P +N   W++++      G  +E F+ ++ ++
Sbjct: 148 DPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAYFGLR 207

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G  P+  ++      C+    L  GEQFHG+ +   FD++  V   +VD Y KC+C  
Sbjct: 208 EAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRCAG 267

Query: 186 EAEYLFKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
           +A  +F    DG   +N V+W +MI  Y+Q+G    A+  +   R  G E   F   S+L
Sbjct: 268 KARAVF----DGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVL 323

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           T CA +   +FG  +H   + S  +AN++V SAL+DMY KCG ++ A ++       N V
Sbjct: 324 TTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLV 383

Query: 303 SWNSMIVGFARQGFHKEALSLFKKM-HARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHS 360
           +WN+MI G+A  G  + AL++F  M  +     +  T  +V+  C    +  +  +   +
Sbjct: 384 TWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELFDT 443

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYE 419
           +  + G E        ++D+  + G  + A+ +   M  +  IS W +L+  C  HG  E
Sbjct: 444 MRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALLGACKMHGKTE 503

Query: 420 ----EALKYFS-DMRISGICPDHVVVSSILSAC---AELTVLEFGQQVHAVFLKSGGCSS 471
                + K F  D + SG   +HV++S++L++    AE T +   +  +    K  GCS 
Sbjct: 504 LGRIASEKLFELDPQDSG---NHVLLSNMLASAGRWAEATDVR-KEMKNVGIKKEPGCSW 559

Query: 472 LSVDNSLVLVYAK 484
           ++  N + + YAK
Sbjct: 560 ITWKNVVHVFYAK 572



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 117/248 (47%), Gaps = 4/248 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D    N M+  Y       +A+ +F+    +N  +W S+I  Y+ +G + +A  ++  
Sbjct: 247 DMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMG 306

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
            +  G  P+ + + +VL  C+    L  G   H  A+++C D N FV + LVDMY KC  
Sbjct: 307 ARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGG 366

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSIL 242
           + +AE +F   P+ +N V W  MI GY+  G    A+  F  M R  G   N  T  +++
Sbjct: 367 VEDAEQVFLDMPE-RNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVI 425

Query: 243 TACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           TAC+       G ++   +    G E      + ++D+  + G  + A  +++   +   
Sbjct: 426 TACSRGGLTKDGYELFDTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPS 485

Query: 302 VS-WNSMI 308
           +S W +++
Sbjct: 486 ISVWGALL 493



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 14/201 (6%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNET-----PF 95
           ALVD +   G +++A Q+F  M +R+  TWN MI  YA+ G  + A  +F+         
Sbjct: 356 ALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTS 415

Query: 96  KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRG-E 153
            N  T  ++I   S  GL  + +ELF  M+   G  P       V+ L    G+ +R  E
Sbjct: 416 PNHITLVNVITACSRGGLTKDGYELFDTMRERFGVEPRTEHYACVVDLLGRAGMEERAYE 475

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKCKC-IFEAEYLFKMFP-DGKNHVAWTTMITGYS 211
                 ++    +    + G   M+ K +     +E LF++ P D  NHV  + M+   +
Sbjct: 476 IIQRMPMRPSISVWG-ALLGACKMHGKTELGRIASEKLFELDPQDSGNHVLLSNML---A 531

Query: 212 QNGYGFKAIECFRDMRVEGVE 232
             G   +A +  ++M+  G++
Sbjct: 532 SAGRWAEATDVRKEMKNVGIK 552


>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Brachypodium distachyon]
          Length = 669

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 234/563 (41%), Positives = 346/563 (61%), Gaps = 8/563 (1%)

Query: 254 GAQVHGCILSSG-FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
           G Q+H   + SG F ++ +  SAL+ MY  C     AR+  +     N V   +M  G+ 
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167

Query: 313 RQGFHKEALSLFKKMHARD--IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           R      +L+LF+K+ A      +D+       +  A   D     S+H+L+VKTG +G 
Sbjct: 168 RNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGD 227

Query: 371 KFVNNALIDMYAKQG--NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
             V N ++D YAK G  +L  A  VF+ M+ KDV+SW S+I   A +G   +AL  +  M
Sbjct: 228 AGVVNTMLDAYAKGGRRDLGAARKVFDTME-KDVVSWNSMIALYAQNGMSADALGLYRKM 286

Query: 429 -RISG-ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
             +SG I  + V +S+IL ACA    ++ G+ +H   ++ G   ++ V  S+V +Y+KCG
Sbjct: 287 LNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCG 346

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
            +  A + F  +  +++++W+A+I G   +G G+EAL  +++M   G  P+YITF+ +L 
Sbjct: 347 RVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLA 406

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ACSHAGL +  R+++ +M K +GI+PG +HY CM+DLLGR+G L EA  L+ +M  +PDA
Sbjct: 407 ACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDA 466

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
            +W ALLSACR+H ++EL E +A  LFEL+  N   YV LSN+Y+ AG W+D  R+R L+
Sbjct: 467 AIWGALLSACRIHKNVELAEISAKRLFELDATNCGYYVLLSNIYAEAGMWKDVERMRVLV 526

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFAL 726
           K+RGI K PG S VE   + H+F   D+ HP   +IYS + +++  ++EAGYVP+    L
Sbjct: 527 KTRGIEKPPGYSSVELKGRTHLFYVGDKSHPQHKEIYSYLGKLLEKMQEAGYVPNTGSVL 586

Query: 727 HNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRH 786
           H+++EE K   L  HSEKLA+AF L+    G+ I + KNLRVC DCHTA+K I+ +  R 
Sbjct: 587 HDLDEEEKASALHIHSEKLAIAFALMNSVPGSVIHVIKNLRVCTDCHTAIKLITKIAQRE 646

Query: 787 IILRDSNRFHHFKAGNCSCGDYW 809
           II+RD  RFHHFK G+CSCGDYW
Sbjct: 647 IIVRDLQRFHHFKDGSCSCGDYW 669



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 178/371 (47%), Gaps = 24/371 (6%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F+ + ++  Y +  R  +A+K F+E P  N    +++  GY    L   +  LF ++ 
Sbjct: 124 DPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYVRNNLVYPSLALFRKLI 183

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGE-----QFHGYAIKTCFDLNAFVVTGLVDMYAK 180
             G   S   +D    L +     +  +       H   +KT  D +A VV  ++D YAK
Sbjct: 184 ASG---SATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGDAGVVNTMLDAYAK 240

Query: 181 C--KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEG-VESNQF 236
              + +  A  +F      K+ V+W +MI  Y+QNG    A+  +R M  V G ++ N  
Sbjct: 241 GGRRDLGAARKVFDTME--KDVVSWNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAV 298

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           T  +IL ACA       G  +H  ++  G E NVYV ++++DMY+KCG ++ AR+  +  
Sbjct: 299 TLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKI 358

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
           +  N +SW++MI G+   G  +EAL +F +M       +  T+ SVL   +    L+  +
Sbjct: 359 KEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKGR 418

Query: 357 SVHSLI-----VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLIT 410
             ++ +     ++ G E Y      ++D+  + G LD A+ +   M+ K D   W +L++
Sbjct: 419 YWYNAMKKRFGIEPGVEHY----GCMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALLS 474

Query: 411 GCAYHGSYEEA 421
            C  H + E A
Sbjct: 475 ACRIHKNVELA 485



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 154/308 (50%), Gaps = 17/308 (5%)

Query: 16  RSKIIGP--ARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAG------QLFEKMS-DRD 66
           R+ ++ P  A +   + +    A D   ALV FS S  I + G       L  K   D D
Sbjct: 168 RNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGD 227

Query: 67  GFTWNTMIAAYANSGR--LREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
               NTM+ AYA  GR  L  A+K+F +T  K+  +W+S+I  Y+  G+  +A  L+ +M
Sbjct: 228 AGVVNTMLDAYAKGGRRDLGAARKVF-DTMEKDVVSWNSMIALYAQNGMSADALGLYRKM 286

Query: 125 -QLEG-YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
             + G  + +  TL  +L  C+  G +Q G+  H   ++   + N +V T +VDMY+KC 
Sbjct: 287 LNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRMGLEENVYVGTSVVDMYSKCG 346

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            +  A   F+   + KN ++W+ MITGY  +G+G +A++ F +M   G   N  TF S+L
Sbjct: 347 RVEMARKAFQKIKE-KNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVL 405

Query: 243 TACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
            AC+     D G   +  +    G E  V     ++D+  + G LD A  L++  ++  +
Sbjct: 406 AACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPD 465

Query: 302 VS-WNSMI 308
            + W +++
Sbjct: 466 AAIWGALL 473



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 10/198 (5%)

Query: 20  IGPARYTHNVGNSVK-PASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWN-----TM 73
           +G  R   NV  S+K  A  L+  L+  +++G I + G+       R G   N     ++
Sbjct: 280 LGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTI-QTGKCIHNQVVRMGLEENVYVGTSV 338

Query: 74  IAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQ 133
           +  Y+  GR+  A+K F +   KN  +WS++I GY  +G   EA ++F +M   G  P+ 
Sbjct: 339 VDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNY 398

Query: 134 YTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLF 191
            T  +VL  CS  GLL +G  ++  A+K  F +   V     +VD+  +  C+ EA  L 
Sbjct: 399 ITFISVLAACSHAGLLDKGRYWYN-AMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLI 457

Query: 192 KMFPDGKNHVAWTTMITG 209
           K      +   W  +++ 
Sbjct: 458 KEMKVKPDAAIWGALLSA 475


>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 998

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 237/659 (35%), Positives = 381/659 (57%), Gaps = 2/659 (0%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           +D +   ++I  Y     + +A+ LF+    K  FTW+++I GYS  G    + +LF QM
Sbjct: 174 QDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQM 233

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
           +     P +Y L +VL  C +   L+ G+Q H Y +++   ++  +V G +D Y KC  +
Sbjct: 234 KEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKV 293

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
                LF    D KN V+WTT+I G  QN +   A++ F +M   G   + F   S+L +
Sbjct: 294 QLGRKLFDRMVD-KNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNS 352

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C ++ A + G QVH   +    + + +V++ LIDMYAKC  L  AR++       + VS+
Sbjct: 353 CGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSY 412

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N+MI G++RQ    EAL LF++M           + S+L   AS   L  +  +H LI+K
Sbjct: 413 NAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIK 472

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            G    +F  +ALID+Y+K   +  A +VF  +QDKD++ WT++ +G       EE+LK 
Sbjct: 473 YGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKL 532

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           +  +++S + P+    +++++A + +  L  GQQ H   +K G      V N+LV +YAK
Sbjct: 533 YKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAK 592

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
            G I +A++ F S + +D   W ++I   AQ+G+ ++ALQ ++ M+  G KP+Y+TFVG+
Sbjct: 593 SGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGV 652

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L ACSH GL +    +F+SM + +GI+PG +HY CM+ LLGR+GKL EAK  +++M  + 
Sbjct: 653 LSACSHTGLLDLGFDHFDSMSQ-FGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQ 711

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
            A VW++LLSACRV G++ELG  AA       P ++  YV LSN++++ G W +  R+R+
Sbjct: 712 AAVVWRSLLSACRVSGNVELGTYAAEMAISCNPADSGSYVLLSNIFASKGMWVNVRRLRE 771

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMN 723
            M   G+ KEPGCSW+E N+++H FI++D  H     I   +D ++L IK  GY+ + +
Sbjct: 772 KMDISGVVKEPGCSWIEVNNEIHKFIAKDTAHRDSAPISLVLDNLLLQIKGFGYMANTD 830



 Score =  295 bits (755), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 180/563 (31%), Positives = 287/563 (50%), Gaps = 12/563 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ-M 124
           D F  NT++ AY+    +  A KLF+    KN  TWSS++  Y+++   +EA  LF Q M
Sbjct: 73  DIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFM 132

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
           +    +P++Y L +V+R C+  G L    Q HG  +K  +  + +V T L+D Y K  CI
Sbjct: 133 RSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACI 192

Query: 185 FEAEYLFKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
            +A  LF    DG   K    WTT+I GYS+ G    +++ F  M+   V  +++   S+
Sbjct: 193 DDARLLF----DGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSV 248

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           L+AC  +   + G Q+H  +L SG   +V + +  ID Y KC  +   R+L +     N 
Sbjct: 249 LSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNV 308

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
           VSW ++I G  +  FH++AL LF +M       D F   SVLN   S + L   + VH+ 
Sbjct: 309 VSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAY 368

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
            +K   +   FV N LIDMYAK  +L  A  VFNLM   D++S+ ++I G +      EA
Sbjct: 369 AIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEA 428

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           L  F +MR+S   P  ++  S+L   A L  LE   Q+H + +K G        ++L+ V
Sbjct: 429 LDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDV 488

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           Y+KC  + DA  VF+ +  +D++ WTA+  G  Q  + +E+L+ Y  +     KP+  TF
Sbjct: 489 YSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTF 548

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA-KALLDQM 600
             ++ A S+     + + +   + K+ G    P     ++D+  +SG + EA KA +   
Sbjct: 549 AAVITAASNIASLRHGQQFHNQVIKM-GFDDDPFVANTLVDMYAKSGSIEEAHKAFIS-- 605

Query: 601 VGEPDATVWKALLSACRVHGDLE 623
               D   W ++++    HG+ E
Sbjct: 606 TNWKDTACWNSMIATYAQHGEAE 628



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 218/432 (50%), Gaps = 18/432 (4%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D F  N +I  YA    L +A+K+FN     +  +++++I GYS      EA +LF +
Sbjct: 375 DNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFRE 434

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+L    P+     ++L + +    L+   Q HG  IK    L+ F  + L+D+Y+KC  
Sbjct: 435 MRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSR 494

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +A  +F+   D K+ V WT M +GY+Q     ++++ ++ +++  ++ N+FTF +++T
Sbjct: 495 VGDARLVFEEIQD-KDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVIT 553

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           A + +++   G Q H  ++  GF+ + +V + L+DMYAK G ++ A +    +   +   
Sbjct: 554 AASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTAC 613

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS----NIDLNNAKSVH 359
           WNSMI  +A+ G  ++AL +F+ M    +K +  T+  VL+  +     ++  ++  S+ 
Sbjct: 614 WNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMS 673

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD-VISWTSLITGCAYHGSY 418
              ++ G E Y      ++ +  + G L  A      M  K   + W SL++ C   G+ 
Sbjct: 674 QFGIEPGIEHYV----CMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNV 729

Query: 419 EEALKYFSDMRISGICPD---HVVVSSILSA---CAELTVLEFGQQVHAVFLKSGGCSSL 472
           E    Y ++M IS    D   +V++S+I ++      +  L     +  V +K  GCS +
Sbjct: 730 ELG-TYAAEMAISCNPADSGSYVLLSNIFASKGMWVNVRRLREKMDISGV-VKEPGCSWI 787

Query: 473 SVDNSLVLVYAK 484
            V+N +    AK
Sbjct: 788 EVNNEIHKFIAK 799


>gi|357509743|ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124360204|gb|ABN08217.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355500175|gb|AES81378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 596

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 226/561 (40%), Positives = 347/561 (61%), Gaps = 8/561 (1%)

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           G Q+H  I+  G +    +   LI+ Y+K     S+ ++   S   +  +W+S+I  FA+
Sbjct: 39  GLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQ 98

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
                 +L+ F+ M  + +  DD  +PS          L  AK +H   +KT +    FV
Sbjct: 99  NDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFV 158

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS-- 431
            +++IDMYAK G++  A  VF+ M  ++V+SW+ LI G    G  +E+L+ F    +   
Sbjct: 159 GSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEE 218

Query: 432 --GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
             G+  +   +SS+L  C   T+L+ G+ +H +  K+   SS  V +SL+ +Y+KCG + 
Sbjct: 219 NEGV--NDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVE 276

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA-RGTKPDYITFVGLLFAC 548
           +A  VF+ +  R++  W A+++ CAQ+    +  + +D+M +  G K ++ITF+ +L+AC
Sbjct: 277 EAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYAC 336

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           SHAGL E  ++YFE M K YGI+PG  HY+ M+DLLGR+GKL +A  L+++M  EP  +V
Sbjct: 337 SHAGLVEKGKYYFELM-KDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESV 395

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           W ALL+ CR+HG+ +L    A+ + EL  +++  +V LSN Y+ AG+WE+AA+ RK+M+ 
Sbjct: 396 WGALLTGCRLHGNTKLASYVADRVSELGSVSSGLHVMLSNAYAAAGRWEEAAKARKMMRD 455

Query: 669 RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHN 728
           RGI+KE G SWVE  +++H F + DR H    +IY K+DE+   + +AGYV D +F L  
Sbjct: 456 RGIKKETGLSWVEEGNRIHTFAAGDRSHAKSVEIYDKLDELGEEMDKAGYVADTSFVLKE 515

Query: 729 VEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHII 788
           V+ E K   + YHSE+LA+AFG +T P G PIR+ KNLRVCGDCHTA+K+IS    R II
Sbjct: 516 VDGEEKSRSIRYHSERLAIAFGFITFPHGQPIRVMKNLRVCGDCHTAIKFISKCTGRVII 575

Query: 789 LRDSNRFHHFKAGNCSCGDYW 809
           +RD+NRFH F+ G C+CGDYW
Sbjct: 576 VRDNNRFHRFEDGKCTCGDYW 596



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 204/419 (48%), Gaps = 8/419 (1%)

Query: 123 QMQLE---GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYA 179
           Q+QL      +P    L N L   +    L +G Q H + IK        +   L++ Y+
Sbjct: 7   QLQLPHSFNQQPLYRNLCNTLLSLTFSRSLPKGLQLHAHIIKLGLQTIPLLSHHLINFYS 66

Query: 180 KCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFP 239
           K    + +  +F   P  K+   W+++I+ ++QN     ++  FR M  +GV  +   FP
Sbjct: 67  KTHLPYSSLQIFHDSPH-KSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFP 125

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
           S   +C  +S+      +H   L + +  +++V S++IDMYAKCGD+  A  + +     
Sbjct: 126 SATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYR 185

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKK--MHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
           N VSW+ +I G+ + G   E+L LFK+  +   +  ++DFT  SVL     +  L   + 
Sbjct: 186 NVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRL 245

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           +H L  KT F+   FV ++LI +Y+K G ++ A+ VF  +  +++  W +++  CA H  
Sbjct: 246 IHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAH 305

Query: 418 YEEALKYFSDMR-ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
            ++  + F  M+ + G+  + +    +L AC+   ++E G+    +    G        +
Sbjct: 306 TDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIEPGTQHYS 365

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVIT-WTALIMGCAQNGKGKEALQFYDQMLARGT 534
           ++V +  + G +NDA ++ + M      + W AL+ GC  +G  K A    D++   G+
Sbjct: 366 TMVDLLGRAGKLNDAVKLIEEMPMEPTESVWGALLTGCRLHGNTKLASYVADRVSELGS 424



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 180/365 (49%), Gaps = 11/365 (3%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +I  Y+ +     + ++F+++P K+  TWSS+I  ++   L + +   F  M  +G  P 
Sbjct: 61  LINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPD 120

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
            +   +  + C +   L   +  H +A+KT + L+ FV + ++DMYAKC  I  A  +F 
Sbjct: 121 DHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFD 180

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV----EGVESNQFTFPSILTACAAV 248
             P  +N V+W+ +I GY Q G   +++  F+   V    EGV  N FT  S+L  C   
Sbjct: 181 EMP-YRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGV--NDFTLSSVLRVCGGS 237

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
           +    G  +HG    + F+++ +V S+LI +Y+KCG ++ A  + E   + N   WN+M+
Sbjct: 238 TLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAML 297

Query: 309 VGFARQGFHKEALSLFKKMHA-RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           +  A+     +   LF KM +   +K +  T+  VL   +    +   K    L+   G 
Sbjct: 298 IACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGI 357

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEALKYFS 426
           E      + ++D+  + G L+ A  +   M  +   S W +L+TGC  HG+ + A  Y +
Sbjct: 358 EPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVWGALLTGCRLHGNTKLA-SYVA 416

Query: 427 DMRIS 431
           D R+S
Sbjct: 417 D-RVS 420



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 132/259 (50%), Gaps = 5/259 (1%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELF--WQ 123
           D F  +++I  YA  G +  A  +F+E P++N  +WS LIYGY   G D E+  LF  + 
Sbjct: 155 DIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFL 214

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           ++ E    + +TL +VLR+C    LLQ G   HG + KT FD + FV + L+ +Y+KC  
Sbjct: 215 VEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGV 274

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR-VEGVESNQFTFPSIL 242
           + EA  +F+     +N   W  M+   +Q+ +  K  E F  M+ V G+++N  TF  +L
Sbjct: 275 VEEAYDVFEEV-TVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVL 333

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NE 301
            AC+     + G      +   G E      S ++D+  + G L+ A +L+E   ++  E
Sbjct: 334 YACSHAGLVEKGKYYFELMKDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTE 393

Query: 302 VSWNSMIVGFARQGFHKEA 320
             W +++ G    G  K A
Sbjct: 394 SVWGALLTGCRLHGNTKLA 412



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/160 (22%), Positives = 73/160 (45%), Gaps = 1/160 (0%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G  F+   D   F  +++I+ Y+  G + EA  +F E   +N   W++++   + +    
Sbjct: 248 GLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTD 307

Query: 116 EAFELFWQMQ-LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
           + FELF +M+ + G + +  T   VL  CS  GL+++G+ +         +      + +
Sbjct: 308 KTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIEPGTQHYSTM 367

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
           VD+  +   + +A  L +  P       W  ++TG   +G
Sbjct: 368 VDLLGRAGKLNDAVKLIEEMPMEPTESVWGALLTGCRLHG 407


>gi|357519251|ref|XP_003629914.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523936|gb|AET04390.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 249/647 (38%), Positives = 373/647 (57%), Gaps = 20/647 (3%)

Query: 172 TGLVDMYAKCKCIFEAEYLFKMFP-DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG 230
           T L+  YA    + EA  LF   P + K+ ++W ++I           A++ F +M    
Sbjct: 92  TKLLLAYAHNNNLHEAINLFNQIPSNTKDTISWNSVIKASIICNDFVTAVKLFDEMP--- 148

Query: 231 VESNQFTFPSIL-----TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
            + N  ++ +I+     T     + R F A  +        + +V   +A+++ Y   G 
Sbjct: 149 -QRNSISWTTIIHGFLSTGRVNEAERFFNAMPY-------VDKDVATWNAMVNGYCNNGR 200

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA-RDIKIDDFTYPSVLN 344
           ++ A RL       + +SW S+IVG  R G   +AL  FK M     + I   T    L+
Sbjct: 201 VNDALRLFCQMPSRDVISWTSIIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTLVCGLS 260

Query: 345 CFASNIDLNNAKSVHSLIVKTGF--EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV 402
             A  +D      +H  + K GF     +FV+ +L+  YA    +  A  VF     K+V
Sbjct: 261 AAAKILDFYAGIQIHCCMFKFGFCCGLDEFVSASLVTFYASCKRMGDACKVFGETVCKNV 320

Query: 403 ISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAV 462
           + WT+L+TGC  +  + EAL+ FS+M    + P+    +S L++C  L  LE G+ +HA 
Sbjct: 321 VVWTALLTGCGLNDKHVEALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAA 380

Query: 463 FLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEA 522
            +K G  +++   NSLV++Y+KCG I DA  VF  +  ++V++W ++I+GCAQ+G G  A
Sbjct: 381 GIKMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWA 440

Query: 523 LQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMID 582
           L  + +ML  G + D IT  GLL ACS +G+ + AR +F    +   +K   +HYACM+D
Sbjct: 441 LVLFKEMLREGVESDEITLTGLLSACSRSGMLQKARCFFGYFARKRSMKLTVEHYACMVD 500

Query: 583 LLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           +LGR G++ EA+AL   M  E ++ VW  LLSACRVH  L++ ERAA  +FE+EP  +  
Sbjct: 501 VLGRCGEVEEAEALATSMPVEANSMVWLVLLSACRVHSSLDVAERAAKRIFEMEPDCSAA 560

Query: 643 YVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDI 702
           YV LSN+Y+++ +W + AR+R  MK  GI K+PG SW+      H F+S DR HPL  +I
Sbjct: 561 YVLLSNLYASSRRWLEVARIRMKMKHNGIVKQPGSSWITLKGMRHEFLSADRSHPLTEEI 620

Query: 703 YSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRI 762
           Y K+  + + ++E GY+PD  FALH+VE E  E  L+YHSE+LA+AFGLL+  +G+ I I
Sbjct: 621 YEKLVWLGVKLRELGYIPDQQFALHDVEIEQNEEMLSYHSERLAIAFGLLSTVEGSTITI 680

Query: 763 FKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            KNLRVCGDCHTA+  ++ +  R I++RDS+RFHHFK G CSCGDYW
Sbjct: 681 MKNLRVCGDCHTAITLMAKIVNREIVVRDSSRFHHFKNGICSCGDYW 727



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 130/509 (25%), Positives = 238/509 (46%), Gaps = 21/509 (4%)

Query: 13  LRCRSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNT 72
           L+CR+       +T  + N    ++ LN   ++   + ++D A  +F K+       +  
Sbjct: 39  LKCRT-----TPFTTLIQNPKSSSTSLNFTFLNHLKNQKLDSARAVFNKIPSPHVSLYTK 93

Query: 73  MIAAYANSGRLREAKKLFNETP--FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           ++ AYA++  L EA  LFN+ P   K+  +W+S+I         + A +LF +M      
Sbjct: 94  LLLAYAHNNNLHEAINLFNQIPSNTKDTISWNSVIKASIICNDFVTAVKLFDEMPQRNSI 153

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
                +   L      G +   E+F  +      D +      +V+ Y     + +A  L
Sbjct: 154 SWTTIIHGFLS----TGRVNEAERF--FNAMPYVDKDVATWNAMVNGYCNNGRVNDALRL 207

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR-VEGVESNQFTFPSILTACAAVS 249
           F   P  ++ ++WT++I G  +NG  ++A+  F++M    GV  +  T    L+A A + 
Sbjct: 208 FCQMPS-RDVISWTSIIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTLVCGLSAAAKIL 266

Query: 250 ARDFGAQVHGCILSSGFEANV--YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
               G Q+H C+   GF   +  +V ++L+  YA C  +  A ++   +   N V W ++
Sbjct: 267 DFYAGIQIHCCMFKFGFCCGLDEFVSASLVTFYASCKRMGDACKVFGETVCKNVVVWTAL 326

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           + G      H EAL +F +M   ++  ++ ++ S LN      DL   + +H+  +K G 
Sbjct: 327 LTGCGLNDKHVEALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMGL 386

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
           E   +  N+L+ MY+K G +  A  VF  + +K+V+SW S+I GCA HG    AL  F +
Sbjct: 387 ENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLFKE 446

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLVLVYAKC 485
           M   G+  D + ++ +LSAC+   +L+  +     F +      L+V++   +V V  +C
Sbjct: 447 MLREGVESDEITLTGLLSACSRSGMLQKARCFFGYFARKRS-MKLTVEHYACMVDVLGRC 505

Query: 486 GCINDANRVFDSMHTR-DVITWTALIMGC 513
           G + +A  +  SM    + + W  L+  C
Sbjct: 506 GEVEEAEALATSMPVEANSMVWLVLLSAC 534



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 193/409 (47%), Gaps = 32/409 (7%)

Query: 46  FSNSGEIDEAGQLFEKMS--DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSS 103
           F ++G ++EA + F  M   D+D  TWN M+  Y N+GR+ +A +LF + P ++  +W+S
Sbjct: 162 FLSTGRVNEAERFFNAMPYVDKDVATWNAMVNGYCNNGRVNDALRLFCQMPSRDVISWTS 221

Query: 104 LIYGYSNYGLDIEAFELFWQM-QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT 162
           +I G    G   +A   F  M    G   S  TL     +C L    +  + + G  I  
Sbjct: 222 IIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTL-----VCGLSAAAKILDFYAGIQIHC 276

Query: 163 CF-------DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG--KNHVAWTTMITGYSQN 213
           C         L+ FV   LV  YA CK + +A    K+F +   KN V WT ++TG   N
Sbjct: 277 CMFKFGFCCGLDEFVSASLVTFYASCKRMGDA---CKVFGETVCKNVVVWTALLTGCGLN 333

Query: 214 GYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
               +A+E F +M    V  N+ +F S L +C  +   + G  +H   +  G E  VY  
Sbjct: 334 DKHVEALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMGLENAVYTG 393

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
           ++L+ MY+KCG +  A  + +     N VSWNS+IVG A+ G    AL LFK+M    ++
Sbjct: 394 NSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLFKEMLREGVE 453

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLI-----VKTGFEGYKFVNNALIDMYAKQGNLD 388
            D+ T   +L+  + +  L  A+           +K   E Y      ++D+  + G ++
Sbjct: 454 SDEITLTGLLSACSRSGMLQKARCFFGYFARKRSMKLTVEHYA----CMVDVLGRCGEVE 509

Query: 389 CAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
            A  +   M  + + + W  L++ C  H S + A +  +  RI  + PD
Sbjct: 510 EAEALATSMPVEANSMVWLVLLSACRVHSSLDVAER--AAKRIFEMEPD 556


>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
          Length = 1017

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 241/687 (35%), Positives = 391/687 (56%), Gaps = 5/687 (0%)

Query: 67  GFTWNTMIAAYANSGRLREAKKLFNETPFK-NFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           GF  N +++ YA +  L  A++LF+    K +   W+S++  YS  G  +E  ELF +M 
Sbjct: 180 GFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMH 239

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT-CFDLNAFVVTGLVDMYAKCKCI 184
           + G  P+ YT+ + L  C      + G++ H   +K+       +V   L+ MY +C  +
Sbjct: 240 MTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKM 299

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            +AE + +   +  + V W ++I GY QN    +A+E F DM   G +S++ +  SI+ A
Sbjct: 300 PQAERILRQM-NNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 358

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
              +S    G ++H  ++  G+++N+ V + LIDMY+KC       R        + +SW
Sbjct: 359 SGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISW 418

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
            ++I G+A+   H EAL LF+ +  + ++ID+    S+L   +    +   K +H  I++
Sbjct: 419 TTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILR 478

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            G      + N L+D+Y K  N+  A  VF  ++ KDV+SWTS+I+  A +G+  EA++ 
Sbjct: 479 KGLLD-TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVEL 537

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           F  M  +G+  D V +  ILSA A L+ L  G+++H   L+ G C   S+  ++V +YA 
Sbjct: 538 FRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYAC 597

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG +  A  VFD +  + ++ +T++I     +G GK A++ +D+M      PD+I+F+ L
Sbjct: 598 CGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLAL 657

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           L+ACSHAGL +  R + + M+  Y ++P P+HY C++D+LGR+  ++EA   +  M  EP
Sbjct: 658 LYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEP 717

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
            A VW ALL+ACR H + E+GE AA  L ELEP N    V +SN+++  G+W D  +VR 
Sbjct: 718 TAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRA 777

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIML-LIKEAGYVPDMN 723
            MK+ G+ K PGCSW+E + +VH F + D+ HP   +IY K+ E+   L +E GYV D  
Sbjct: 778 KMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTK 837

Query: 724 FALHNVEEEGKEIGLAYHSEKLAVAFG 750
           F LHNV+E  K   L  HSE++A+A+G
Sbjct: 838 FVLHNVDEGEKVQMLHGHSERIAIAYG 864



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 146/545 (26%), Positives = 252/545 (46%), Gaps = 19/545 (3%)

Query: 19  IIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYA 78
           + GPA  ++ + +++      +     ++  G+   A  L       + +  N +IA Y 
Sbjct: 240 MTGPAPNSYTIVSALTACDGFS-----YAKLGKEIHASVLKSSTHSSELYVCNALIAMYT 294

Query: 79  NSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDN 138
             G++ +A+++  +    +  TW+SLI GY    +  EA E F  M   G++  + ++ +
Sbjct: 295 RCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTS 354

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           ++        L  G + H Y IK  +D N  V   L+DMY+KC         F    D K
Sbjct: 355 IIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD-K 413

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
           + ++WTT+I GY+QN    +A+E FRD+  + +E ++    SIL A + + +     ++H
Sbjct: 414 DLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIH 473

Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
             IL  G    V +Q+ L+D+Y KC ++  A R+ E  +  + VSW SMI   A  G   
Sbjct: 474 CHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNES 532

Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           EA+ LF++M    +  D      +L+  AS   LN  + +H  +++ GF     +  A++
Sbjct: 533 EAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVV 592

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
           DMYA  G+L  A  VF+ ++ K ++ +TS+I     HG  + A++ F  MR   + PDH+
Sbjct: 593 DMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHI 652

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN-SLVLVYAKCGCINDANRVFDS 497
              ++L AC+   +L+ G+    +                LV +  +  C+ +A      
Sbjct: 653 SFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKM 712

Query: 498 MHTRDVI-TWTALIMGCAQNGKGKEALQFYDQML--ARGTKPDYITFVGLLFACSHAGLA 554
           M T      W AL+  C  + + KE  +   Q L       P  +  V  +F       A
Sbjct: 713 MKTEPTAEVWCALLAACRSHSE-KEIGEIAAQRLLELEPKNPGNLVLVSNVF-------A 764

Query: 555 ENARW 559
           E  RW
Sbjct: 765 EQGRW 769


>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
           [Vitis vinifera]
 gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 233/574 (40%), Positives = 338/574 (58%), Gaps = 7/574 (1%)

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID---MYAKCGDLDSARRLLEYS 296
           S+L  C   S R+   Q+    + +   +++ V +  I+   +      +  A  L +  
Sbjct: 25  SLLPKCT--SLREL-KQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQI 81

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              + V +N+M  G+AR      A +LF ++    +  DD+T+PS+L   AS   L   +
Sbjct: 82  PQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGR 141

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H L +K G     +V   LI+MY     +DCA  VF+ + +  V+++ ++ITG A   
Sbjct: 142 QLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGS 201

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
              EAL  F +++   + P  V + S+LS+CA L  L+ G+ +H    K+G    + VD 
Sbjct: 202 RPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDT 261

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           +L+ +YAKCG ++DA  VF++M  RD   W+A+IM  A +G G +A+  + +M   GT+P
Sbjct: 262 ALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEP 321

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           D ITF+GLL+ACSH GL E    YF  M   YG+ PG  HY CM+DLLGR+G+L EA   
Sbjct: 322 DEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEF 381

Query: 597 LDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
           +  +   P   +W+ LLSAC  HG++ELG+R    +FEL+  +   Y+ LSN+ + AG+W
Sbjct: 382 IVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARAGRW 441

Query: 657 EDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA 716
           ED   VRKLM  RG+ K PGCS VE N+ VH F S D  H + T ++  +DE++  +K  
Sbjct: 442 EDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALDELVKELKLV 501

Query: 717 GYVPDMNFALH-NVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
           GYVP+ +   H ++E+E KE+ L YHSEKLA+ FGLL  P G  IR+ KNLRVCGDCH+A
Sbjct: 502 GYVPNTSLVFHADMEDEEKEVTLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHSA 561

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            K IS ++ R IILRD  RFHHFK G CSC DYW
Sbjct: 562 AKLISLIFDRQIILRDVQRFHHFKDGKCSCEDYW 595



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 202/414 (48%), Gaps = 35/414 (8%)

Query: 83  LREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRL 142
           ++ A  LF++ P  +   ++++  GY+     + AF LF Q+   G  P  YT  ++L+ 
Sbjct: 71  MQHAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKA 130

Query: 143 CSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVA 202
           C+    L+ G Q H  AIK     N +V   L++MY  C  +  A  +F    +    V 
Sbjct: 131 CASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWE-PCVVT 189

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
           +  MITGY++     +A+  FR+++   ++    T  S+L++CA + A D G  +H  + 
Sbjct: 190 YNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVK 249

Query: 263 SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
            +GF   V V +ALIDMYAKCG LD A  + E   + +  +W++MI+ +A  G   +A+S
Sbjct: 250 KNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVS 309

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN------- 375
           LFK+M     + D+ T+  +L  +A +         H+ +V+ GFE +  + +       
Sbjct: 310 LFKEMRKAGTEPDEITFLGLL--YACS---------HTGLVEEGFEYFYGMRDKYGVIPG 358

Query: 376 -----ALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS--- 426
                 ++D+  + G L+ A+  +  L      I W +L++ C  HG+ E   +      
Sbjct: 359 IKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIF 418

Query: 427 --DMRISGICPDHVVVSSILSACAELTVLEFGQQV--HAVFLKSGGCSSLSVDN 476
             D    G   D++++S++ +       + + +++      +K  GCSS+ V+N
Sbjct: 419 ELDDSHGG---DYIILSNLCARAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNN 469



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 139/290 (47%), Gaps = 12/290 (4%)

Query: 54  EAGQLFEKMSDRDGFTWN-----TMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY 108
           E G+    ++ + G + N     T+I  Y     +  A+++F++       T++++I GY
Sbjct: 138 EEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGY 197

Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA 168
           +      EA  LF ++Q    +P+  T+ +VL  C+L G L  G+  H Y  K  F+   
Sbjct: 198 ARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFV 257

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
            V T L+DMYAKC  + +A  +F+     ++  AW+ MI  Y+ +G+G KA+  F++MR 
Sbjct: 258 KVDTALIDMYAKCGSLDDAVCVFENMA-VRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRK 316

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQ-VHGCILSSGFEANVYVQSALIDMYAKCGDLD 287
            G E ++ TF  +L AC+     + G +  +G     G    +     ++D+  + G L+
Sbjct: 317 AGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLE 376

Query: 288 SARRLLEYSEI-DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
            A   +    I    + W +++      G     + L K++  +  ++DD
Sbjct: 377 EAYEFIVGLPIRPTPILWRTLLSACGSHG----NVELGKRVIEQIFELDD 422



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 5/92 (5%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNET---- 93
           ++ AL+D ++  G +D+A  +FE M+ RD   W+ MI AYA  G   +A  LF E     
Sbjct: 259 VDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAG 318

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
              +  T+  L+Y  S+ GL  E FE F+ M+
Sbjct: 319 TEPDEITFLGLLYACSHTGLVEEGFEYFYGMR 350


>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
           isoform 1 [Vitis vinifera]
          Length = 672

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 252/668 (37%), Positives = 366/668 (54%), Gaps = 49/668 (7%)

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC----IFEAEYLFKMFPDGKNHVAWT 204
           L   +Q H   ++T    ++++   LV  YA         FE+      F    N   W 
Sbjct: 47  LHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWN 106

Query: 205 TMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS 264
            MI    +N   FKAI  + +M V     N++T+P++L AC+       G QVH  ++  
Sbjct: 107 CMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKH 166

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLE--YSEIDNEVSWNSMIVGFARQGFHKEALS 322
           G   + ++ S+ I MYA  G L  ARR+L+    E+D  V WN+MI G+ R G  + A  
Sbjct: 167 GLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVD-AVCWNAMIDGYLRFGEVEAARE 225

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYA 382
           LF+ M  R          S+++ +                            NA+I  ++
Sbjct: 226 LFEGMPDR----------SMISTW----------------------------NAMISGFS 247

Query: 383 KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
           + G ++ A   F+ M+++D ISW+++I G    G + EAL+ F  M+   I P   V+ S
Sbjct: 248 RCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPS 307

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
           +LSACA L  L+ G+ +H    ++       +  SLV +YAKCG I+ A  VF+ M  ++
Sbjct: 308 VLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKE 367

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
           V +W A+I G A +G+ ++A+  + +M      P+ ITFVG+L AC+H GL +     F 
Sbjct: 368 VSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKGLTIFN 424

Query: 563 SMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDL 622
           SM K YG++P  +HY C++DLLGR+G L EA+ ++  +  EP   VW ALL ACR HG++
Sbjct: 425 SMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNV 484

Query: 623 ELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVET 682
           ELGER    L ELEP N+  Y  LSN+Y+ AG+WE+   VRKLMK RGI+  PG S ++ 
Sbjct: 485 ELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDL 544

Query: 683 -NSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYH 741
              +VH FI  D  HP   DIY  +D++   ++  GY PD +  L +++EE KE  +  H
Sbjct: 545 GRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQH 604

Query: 742 SEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAG 801
           SEKLA+ FGL+    G  IRI KNLRVC DCH+A K IS VY R II+RD  R+HHF+ G
Sbjct: 605 SEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNG 664

Query: 802 NCSCGDYW 809
            CSC D+W
Sbjct: 665 ACSCKDFW 672



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/460 (25%), Positives = 212/460 (46%), Gaps = 48/460 (10%)

Query: 65  RDGFTWNTMIAAYANSGRLR-----EAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFE 119
           +D +   +++ +YAN    R      + ++F+     N F W+ +I          +A  
Sbjct: 64  QDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAIL 123

Query: 120 LFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYA 179
           L+++M +  +RP++YT   VL+ CS  G++  G Q H + +K     +  +++  + MYA
Sbjct: 124 LYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYA 183

Query: 180 KCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFP 239
               + EA  +        + V W  MI GY +    F  +E  R++  EG+        
Sbjct: 184 SFGRLVEARRILDDKGGEVDAVCWNAMIDGYLR----FGEVEAAREL-FEGMPDRSM--- 235

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
                                         +   +A+I  +++CG ++ AR   +  +  
Sbjct: 236 ------------------------------ISTWNAMISGFSRCGMVEVAREFFDEMKER 265

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           +E+SW++MI G+ ++G   EAL +F +M    I+   F  PSVL+  A+   L+  + +H
Sbjct: 266 DEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIH 325

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
           +   +   +    +  +L+DMYAK G +D A+ VF  M +K+V SW ++I G A HG  E
Sbjct: 326 TYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAE 385

Query: 420 EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSL 478
           +A+  FS M I+   P+ +    +L+ACA   +++ G  +     K  G    +     +
Sbjct: 386 DAIDLFSKMDIN---PNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCI 442

Query: 479 VLVYAKCGCINDANRVFDSMHTRDV-ITWTALIMGCAQNG 517
           V +  + G + +A +V  S+ T      W AL+  C ++G
Sbjct: 443 VDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHG 482



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 139/314 (44%), Gaps = 43/314 (13%)

Query: 39  LNRALVDFSNSGEIDEAGQLFE-KMSDRDGFTWNTMIAAYANSGRLREAKKLFNETP--- 94
           L+ A+  +++ G + EA ++ + K  + D   WN MI  Y   G +  A++LF   P   
Sbjct: 175 LSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRS 234

Query: 95  --------------------FKNFF---------TWSSLIYGYSNYGLDIEAFELFWQMQ 125
                                + FF         +WS++I GY   G  +EA E+F QMQ
Sbjct: 235 MISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQ 294

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            E  RP ++ L +VL  C+  G L +G   H YA +    L+  + T LVDMYAKC  I 
Sbjct: 295 KEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRID 354

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A  +F+   + K   +W  MI G + +G    AI+ F  M    +  N+ TF  +L AC
Sbjct: 355 LAWEVFEKMSN-KEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNAC 410

Query: 246 AAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS- 303
           A       G  +   +    G E  +     ++D+  + G L  A +++  S I  E + 
Sbjct: 411 AHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVV--SSIPTEPTP 468

Query: 304 --WNSMIVGFARQG 315
             W +++    + G
Sbjct: 469 AVWGALLGACRKHG 482



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 12/226 (5%)

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC-----INDANRVFDSMHTRDVIT 505
           T L   +Q HA+ L++G      +  SLV  YA            + RVFD +   +V  
Sbjct: 45  TSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFL 104

Query: 506 WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMD 565
           W  +I  C +N +  +A+  Y +M+    +P+  T+  +L ACS AG+          + 
Sbjct: 105 WNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLV 164

Query: 566 KVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELG 625
           K +G+       +  I +    G+L+EA+ +LD   GE DA  W A++      G++E  
Sbjct: 165 K-HGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVE-- 221

Query: 626 ERAANNLFELEPMNAM--PYVQLSNMYSTAGKWEDAARVRKLMKSR 669
             AA  LFE  P  +M   +  + + +S  G  E A      MK R
Sbjct: 222 --AARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKER 265



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 3/133 (2%)

Query: 25  YTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRL 83
           +T+   NS++    L  +LVD ++  G ID A ++FEKMS+++  +WN MI   A  GR 
Sbjct: 325 HTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRA 384

Query: 84  REAKKLFNETPFK-NFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLR 141
            +A  LF++     N  T+  ++   ++ GL  +   +F  M+ E G  P       ++ 
Sbjct: 385 EDAIDLFSKMDINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVD 444

Query: 142 LCSLKGLLQRGEQ 154
           L    GLL   E+
Sbjct: 445 LLGRAGLLTEAEK 457


>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g46460, mitochondrial; Flags: Precursor
 gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
 gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 697

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 264/739 (35%), Positives = 394/739 (53%), Gaps = 82/739 (11%)

Query: 72  TMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRP 131
            +I  +  S R+ EA+++FN+ P  +   ++ +I GY+     ++A  LF +M +     
Sbjct: 40  VLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVR---- 95

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
                D V     + G ++            C D+N  V                   LF
Sbjct: 96  -----DVVSWNSMISGCVE------------CGDMNTAV------------------KLF 120

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
              P+ ++ V+WT M+ G            CFR  +V+  E   +  P   TA       
Sbjct: 121 DEMPE-RSVVSWTAMVNG------------CFRSGKVDQAERLFYQMPVKDTAA------ 161

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
            + + VHG                    Y + G +D A +L +     N +SW +MI G 
Sbjct: 162 -WNSMVHG--------------------YLQFGKVDDALKLFKQMPGKNVISWTTMICGL 200

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
            +     EAL LFK M    IK     +  V+   A+    +    VH LI+K GF   +
Sbjct: 201 DQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEE 260

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
           +V+ +LI  YA    +  +  VF+    + V  WT+L++G + +  +E+AL  FS M  +
Sbjct: 261 YVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRN 320

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
            I P+    +S L++C+ L  L++G+++H V +K G  +   V NSLV++Y+  G +NDA
Sbjct: 321 SILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDA 380

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
             VF  +  + +++W ++I+GCAQ+G+GK A   + QM+    +PD ITF GLL ACSH 
Sbjct: 381 VSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHC 440

Query: 552 GLAENARWYFESMDK-VYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
           G  E  R  F  M   +  I     HY CM+D+LGR GKL EA+ L+++MV +P+  VW 
Sbjct: 441 GFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWL 500

Query: 611 ALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRG 670
           ALLSACR+H D++ GE+AA  +F L+  ++  YV LSN+Y++AG+W + +++R  MK  G
Sbjct: 501 ALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNG 560

Query: 671 IRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVE 730
           I K+PG SWV    + H F S D+ H  R  IY K++ +   +KE GY PD   ALH+VE
Sbjct: 561 IMKKPGSSWVVIRGKKHEFFSGDQPHCSR--IYEKLEFLREKLKELGYAPDYRSALHDVE 618

Query: 731 EEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILR 790
           +E KE  L YHSE+LA+AFGL+   +G+ + + KNLRVC DCHT +K IS V  R I+LR
Sbjct: 619 DEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLR 678

Query: 791 DSNRFHHFKAGNCSCGDYW 809
           D  RFHHFK G CSCGDYW
Sbjct: 679 DPIRFHHFKNGTCSCGDYW 697



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 141/471 (29%), Positives = 234/471 (49%), Gaps = 18/471 (3%)

Query: 49  SGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY 108
           S  IDEA ++F ++       +  MI  Y  S RL +A  LF+E P ++  +W+S+I G 
Sbjct: 48  SRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGC 107

Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ-FHGYAIKTCFDLN 167
              G    A +LF +M       S  +   ++  C   G + + E+ F+   +K     N
Sbjct: 108 VECGDMNTAVKLFDEMP----ERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWN 163

Query: 168 AFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR 227
           +     +V  Y +   + +A  LFK  P GKN ++WTTMI G  QN    +A++ F++M 
Sbjct: 164 S-----MVHGYLQFGKVDDALKLFKQMP-GKNVISWTTMICGLDQNERSGEALDLFKNML 217

Query: 228 VEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLD 287
              ++S    F  ++TACA   A   G QVHG I+  GF    YV ++LI  YA C  + 
Sbjct: 218 RCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIG 277

Query: 288 SARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFA 347
            +R++ +    +    W +++ G++    H++ALS+F  M    I  +  T+ S LN  +
Sbjct: 278 DSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCS 337

Query: 348 SNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTS 407
           +   L+  K +H + VK G E   FV N+L+ MY+  GN++ A  VF  +  K ++SW S
Sbjct: 338 ALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNS 397

Query: 408 LITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG 467
           +I GCA HG  + A   F  M      PD +  + +LSAC+    LE G+++   +  S 
Sbjct: 398 IIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKL--FYYMSS 455

Query: 468 GCSSLSVD----NSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
           G + +         +V +  +CG + +A  + + M  + + + W AL+  C
Sbjct: 456 GINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSAC 506



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 183/385 (47%), Gaps = 18/385 (4%)

Query: 49  SGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY 108
           SG++D+A +LF +M  +D   WN+M+  Y   G++ +A KLF + P KN  +W+++I G 
Sbjct: 141 SGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGL 200

Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA 168
                  EA +LF  M     + +      V+  C+       G Q HG  IK  F    
Sbjct: 201 DQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEE 260

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNH---VAWTTMITGYSQNGYGFKAIECFRD 225
           +V   L+  YA CK I ++  +F    D K H     WT +++GYS N     A+  F  
Sbjct: 261 YVSASLITFYANCKRIGDSRKVF----DEKVHEQVAVWTALLSGYSLNKKHEDALSIFSG 316

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M    +  NQ TF S L +C+A+   D+G ++HG  +  G E + +V ++L+ MY+  G+
Sbjct: 317 MLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGN 376

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           ++ A  +       + VSWNS+IVG A+ G  K A  +F +M   + + D+ T+  +L+ 
Sbjct: 377 VNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSA 436

Query: 346 FASNIDLNNAKSVHSLI------VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
            +    L   + +   +      +    + Y      ++D+  + G L  A  +   M  
Sbjct: 437 CSHCGFLEKGRKLFYYMSSGINHIDRKIQHY----TCMVDILGRCGKLKEAEELIERMVV 492

Query: 400 K-DVISWTSLITGCAYHGSYEEALK 423
           K + + W +L++ C  H   +   K
Sbjct: 493 KPNEMVWLALLSACRMHSDVDRGEK 517


>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 705

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 250/684 (36%), Positives = 372/684 (54%), Gaps = 72/684 (10%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P    LD+ +R  S  G+  R  + H   IKT F    F+   LVD Y KC    +A  +
Sbjct: 21  PFAKLLDSCVR--SKSGIDAR--RIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKV 76

Query: 191 FKMFPD----------------GK--------------NHVAWTTMITGYSQNGYGFKAI 220
           F   P                 GK              +  +W  M++G++Q+    +A+
Sbjct: 77  FDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEAL 136

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
             F DM  E    N+++F S L+ACA ++  + G Q+H  I  S +  +VY+ SAL+DMY
Sbjct: 137 RFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMY 196

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
           +KCG +  A+R  +   + N VSWNS+I  + + G   +AL +F  M    ++ D+ T  
Sbjct: 197 SKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLA 256

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTG-FEGYKFVNNALIDMYAK---------------- 383
           SV++  AS   +     +H+ +VK   +     + NAL+DMYAK                
Sbjct: 257 SVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPL 316

Query: 384 ---------------QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
                            ++  A ++F+ M +K+V+SW +LI G   +G  EEA++ F  +
Sbjct: 317 RNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLL 376

Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK------SGGCSSLSVDNSLVLVY 482
           +   I P H    ++L+ACA L  L+ G+Q H   LK      SG  S + V NSL+ +Y
Sbjct: 377 KRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMY 436

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
            KCG + D   VF+ M  RDV++W A+I+G AQNG G  AL+ + +ML  G KPD++T +
Sbjct: 437 MKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMI 496

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
           G+L ACSHAGL E  R YF SM    G+ P  DH+ CM+DLLGR+G L EA  L+  M  
Sbjct: 497 GVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPM 556

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
           +PD  VW +LL+AC+VHG++ELG+  A  L E++P+N+ PYV LSNMY+  G+W+D  RV
Sbjct: 557 QPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRV 616

Query: 663 RKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDM 722
           RK M+ RG+ K+PGCSW+E  S+VH+F+ +D+ HPL+ DI+  +  +   +K AGYVP+ 
Sbjct: 617 RKQMRQRGVIKQPGCSWIEIQSRVHVFMVKDKRHPLKKDIHLVLKFLTEQMKWAGYVPEA 676

Query: 723 NFALHNVEEEGKEIGLAYHSEKLA 746
           +      EE   E+ L +  E  A
Sbjct: 677 DDDEICEEESDSELVLHFEMETEA 700



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 163/557 (29%), Positives = 287/557 (51%), Gaps = 52/557 (9%)

Query: 7   KILNFSLRCRSKIIGPARYTHNVGNSVKPASDL---NRALVDFSNSGEIDEAGQLFEKMS 63
           K+L+  +R +S I   AR  H      + +S++   NR +  +   G  ++A ++F++M 
Sbjct: 24  KLLDSCVRSKSGI--DARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMP 81

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
            R+ F++N +++     G+L EA  +F   P  +  +W++++ G++ +    EA   F  
Sbjct: 82  QRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVD 141

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M  E +  ++Y+  + L  C+    L  G Q H    K+ + L+ ++ + LVDMY+KC  
Sbjct: 142 MHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGV 201

Query: 184 IFEAEYLFKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
           +  A+  F    DG   +N V+W ++IT Y QNG   KA+E F  M   GVE ++ T  S
Sbjct: 202 VACAQRAF----DGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLAS 257

Query: 241 ILTACAAVSARDFGAQVHGCILS-SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI- 298
           +++ACA+ SA   G Q+H  ++    +  ++ + +AL+DMYAKC  ++ AR + +   + 
Sbjct: 258 VVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLR 317

Query: 299 ------------------------------DNEVSWNSMIVGFARQGFHKEALSLFKKMH 328
                                          N VSWN++I G+ + G ++EA+ LF  + 
Sbjct: 318 NVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLK 377

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF------EGYKFVNNALIDMYA 382
              I    +T+ ++LN  A+  DL   +  H+ I+K GF      E   FV N+LIDMY 
Sbjct: 378 RESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYM 437

Query: 383 KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
           K G ++   +VF  M ++DV+SW ++I G A +G    AL+ F  M +SG  PDHV +  
Sbjct: 438 KCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIG 497

Query: 443 ILSACAELTVLEFGQQ-VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR 501
           +LSAC+   ++E G++  H++  + G          +V +  + GC+++AN +  +M  +
Sbjct: 498 VLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQ 557

Query: 502 -DVITWTALIMGCAQNG 517
            D + W +L+  C  +G
Sbjct: 558 PDNVVWGSLLAACKVHG 574


>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 720

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/680 (35%), Positives = 383/680 (56%), Gaps = 7/680 (1%)

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
           + +T   +LR C  +  +   +      +K+ F +     + LVD   KC  I  A  LF
Sbjct: 46  TTHTFSQLLRQCIDERSISGIKNIQAQMLKSGFPVE-LSGSKLVDASLKCGEIGYARQLF 104

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
              P+ ++ V W ++I  Y ++    +A+E +R M    V  +++T  S+  A + +S  
Sbjct: 105 DGMPE-RHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFKAFSDLSLE 163

Query: 252 DFGAQVHGCILSSGFE-ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
               + HG  +  G E +NV+V SAL+DMY K G    A+ +L+  E  + V   ++IVG
Sbjct: 164 KEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVG 223

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           ++++G   EA+  F+ M    ++ +++TY SVL    +  D+ N K +H L+VK+GFE  
Sbjct: 224 YSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESA 283

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
                +L+ MY +   +D + +VF  ++  + ++WTSLI+G   +G  E AL  F  M  
Sbjct: 284 LASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREETALIEFRKMMR 343

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
             + P+   +SS L  C+ L + E G+QVH +  K G        + L+ +Y KCGC + 
Sbjct: 344 DSVKPNSFTLSSALRGCSNLAMFEEGRQVHGIVSKYGFDRDKYAGSGLIELYGKCGCSDM 403

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           A  VFD++   DVI+   +I   AQNG G+EAL+ +++M+  G +P+ +T + +L AC++
Sbjct: 404 ARLVFDTLSEVDVISLNTMIYSYAQNGFGREALELFERMINLGLQPNDVTVLSVLLACNN 463

Query: 551 AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
           +GL E     F+S  K   I    DHYACM+D+LGR+G+L EA+ L+ + V  PD  +W+
Sbjct: 464 SGLVEEGCELFDSFRK-DKIMLTNDHYACMVDMLGRAGRLEEAEMLITE-VTNPDLVLWR 521

Query: 611 ALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRG 670
            LLSAC+VH  +E+ ER    + E+ P +    + LSN+Y++ GKW+    ++  MK   
Sbjct: 522 TLLSACKVHRKVEMAERITRKILEIAPGDEGTLILLSNLYASTGKWKRVIEMKSKMKEMK 581

Query: 671 IRKEPGCSWVETNSQVHIFISEDR-GHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNV 729
           ++K P  SWVE + + H F++ D   HP    I   ++E++   K+ GYV D +    ++
Sbjct: 582 LKKNPAMSWVEIDKETHTFMAGDLFSHPNSEQILENLEELIKKAKDLGYVEDKSCVFQDM 641

Query: 730 EEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIIL 789
           EE  KE  L  HSEKLA+AF +     G  IRI KNLRVC DCH+ +K +S +  R II 
Sbjct: 642 EETAKERSLHQHSEKLAIAFAVWR-NVGGSIRILKNLRVCVDCHSWIKIVSRIIKREIIC 700

Query: 790 RDSNRFHHFKAGNCSCGDYW 809
           RDS RFHHF+ G+CSCGDYW
Sbjct: 701 RDSKRFHHFRDGSCSCGDYW 720



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/464 (29%), Positives = 239/464 (51%), Gaps = 2/464 (0%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
            + + ++ A    G +  A++LF+  P ++  TW+S+I  Y  +    EA E++  M   
Sbjct: 82  LSGSKLVDASLKCGEIGYARQLFDGMPERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISN 141

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDL-NAFVVTGLVDMYAKCKCIFE 186
              P +YTL +V +  S   L +  ++ HG A+    ++ N FV + LVDMY K     E
Sbjct: 142 NVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTRE 201

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A+ +     + K+ V  T +I GYSQ G   +A++ F+ M VE V+ N++T+ S+L +C 
Sbjct: 202 AKLVLDRVEE-KDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCG 260

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            +     G  +HG ++ SGFE+ +  Q++L+ MY +C  +D +  + +  +  N+V+W S
Sbjct: 261 NLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTS 320

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           +I G  + G  + AL  F+KM    +K + FT  S L   ++       + VH ++ K G
Sbjct: 321 LISGLVQNGREETALIEFRKMMRDSVKPNSFTLSSALRGCSNLAMFEEGRQVHGIVSKYG 380

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
           F+  K+  + LI++Y K G  D A +VF+ + + DVIS  ++I   A +G   EAL+ F 
Sbjct: 381 FDRDKYAGSGLIELYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALELFE 440

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
            M   G+ P+ V V S+L AC    ++E G ++   F K     +      +V +  + G
Sbjct: 441 RMINLGLQPNDVTVLSVLLACNNSGLVEEGCELFDSFRKDKIMLTNDHYACMVDMLGRAG 500

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
            + +A  +   +   D++ W  L+  C  + K + A +   ++L
Sbjct: 501 RLEEAEMLITEVTNPDLVLWRTLLSACKVHRKVEMAERITRKIL 544



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 6/184 (3%)

Query: 31  NSVKPAS-DLNRALVDFSNSGEIDEAGQLFEKMS----DRDGFTWNTMIAAYANSGRLRE 85
           +SVKP S  L+ AL   SN    +E  Q+   +S    DRD +  + +I  Y   G    
Sbjct: 344 DSVKPNSFTLSSALRGCSNLAMFEEGRQVHGIVSKYGFDRDKYAGSGLIELYGKCGCSDM 403

Query: 86  AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL 145
           A+ +F+     +  + +++IY Y+  G   EA ELF +M   G +P+  T+ +VL  C+ 
Sbjct: 404 ARLVFDTLSEVDVISLNTMIYSYAQNGFGREALELFERMINLGLQPNDVTVLSVLLACNN 463

Query: 146 KGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTT 205
            GL++ G +      K    L       +VDM  +   + EAE L     +  + V W T
Sbjct: 464 SGLVEEGCELFDSFRKDKIMLTNDHYACMVDMLGRAGRLEEAEMLITEVTN-PDLVLWRT 522

Query: 206 MITG 209
           +++ 
Sbjct: 523 LLSA 526


>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
          Length = 795

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 247/746 (33%), Positives = 400/746 (53%), Gaps = 7/746 (0%)

Query: 67  GFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL 126
           G    ++I ++  +GR+ EA   F        F  + +I G+++  L ++A   +  M  
Sbjct: 54  GSRPKSLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLD 113

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
            G RP ++T   VL+ C+  G L  G   H   IK     + +    LV +YAK   + +
Sbjct: 114 AGARPDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGD 173

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR-VEGVESNQFTFPSILTAC 245
           AE +F   P  ++ V+W TM+ GY  NG G  A+ CFR+M     V  +     + L AC
Sbjct: 174 AERVFDGMP-ARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAAC 232

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
              SA   G ++HG  +  G E +V V ++L+DMY KCG++  A  +     +   V+WN
Sbjct: 233 CLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWN 292

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
            MI G+A      +A   F +M     +++  T  ++L   A        +SVH+ +V+ 
Sbjct: 293 CMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRR 352

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
            F  +  +  AL++MY K G ++ +  +F  + DK ++SW ++I    Y   Y+EA+  F
Sbjct: 353 HFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALF 412

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
            ++    + PD+  +++++ A   L  +   +Q+H+  +K G   S  + N+++ +YA+C
Sbjct: 413 LELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARC 472

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G I  +  +FD M  +DVI+W  +I+G A +G+GK AL+ +D+M   G +P+  TFV +L
Sbjct: 473 GNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVL 532

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
            ACS +GL       F SM + YG+ P  +HY CM DLLGR+G+L E    ++ M   P 
Sbjct: 533 TACSVSGLEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPIAPT 592

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
           + +W +LL+A R   D+++ E AA  +F+LE  N   YV LS+MY+ AG+WED  R+R L
Sbjct: 593 SRIWGSLLTASRNKNDIDIAEYAAERIFQLEHNNTGCYVVLSSMYADAGRWEDVERIRSL 652

Query: 666 MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFA 725
           MK +G+R+    S VE N++   F++ D  HP    I+   D   +L +  G   D +  
Sbjct: 653 MKEKGLRRTEARSLVELNNKECSFVNGDMSHPQSEKIHEFSD---ILSRNIGEDLDSSSN 709

Query: 726 LHNVEEEGKEIGLA--YHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVY 783
           L + +       +    HS +LAVAFGL++   G+P+ + KN+RVC  CH A+K IS   
Sbjct: 710 LRDSDPFASSTTVLPNKHSVRLAVAFGLISSEAGSPVLVKKNVRVCNHCHHALKLISKYS 769

Query: 784 LRHIILRDSNRFHHFKAGNCSCGDYW 809
            R I++ D+  +H F  G+C CGDYW
Sbjct: 770 GRKIVVGDTKIYHIFSDGSCCCGDYW 795



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 130/388 (33%), Positives = 213/388 (54%), Gaps = 10/388 (2%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +T N+++A YA  G + +A+++F+  P ++  +W++++ GY + G+   A   F +M 
Sbjct: 154 DVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALACFREMN 213

Query: 126 LEGYRPSQYTLDNV-----LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK 180
                  Q   D+V     L  C L+  L  G + HGYAI+   + +  V T LVDMY K
Sbjct: 214 ----DALQVGHDSVGVIAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCK 269

Query: 181 CKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
           C  +F AE +F   P  +  V W  MI GY+ N     A +CF  MRV+G +    T  +
Sbjct: 270 CGNVFFAENVFAKMPL-RTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAIN 328

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           +LTACA   +  FG  VH  ++   F  +V +++AL++MY K G ++S+ ++        
Sbjct: 329 LLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKT 388

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
            VSWN+MI  +     ++EA++LF ++  + +  D FT  +V+  F     +   K +HS
Sbjct: 389 LVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHS 448

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
            IVK G+     + NA++ MYA+ GN+  +  +F+ M  KDVISW ++I G A HG  + 
Sbjct: 449 YIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKI 508

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACA 448
           AL+ F +M+ SG+ P+     S+L+AC+
Sbjct: 509 ALEMFDEMKCSGMEPNESTFVSVLTACS 536



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 169/350 (48%), Gaps = 3/350 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           ++D     +++  Y   G +  A+ +F + P +   TW+ +I GY+     ++AF+ F Q
Sbjct: 254 EQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDCFMQ 313

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+++G++    T  N+L  C+       G   H Y ++  F  +  + T L++MY K   
Sbjct: 314 MRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGK 373

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +  +E +F    D K  V+W  MI  Y       +AI  F ++  + +  + FT  +++ 
Sbjct: 374 VESSEKIFGQITD-KTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVP 432

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           A   + +     Q+H  I+  G+  +  + +A++ MYA+CG++ ++R + +     + +S
Sbjct: 433 AFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVIS 492

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLI 362
           WN++I+G+A  G  K AL +F +M    ++ ++ T+ SVL  C  S ++    K  +S+ 
Sbjct: 493 WNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEGWKEFNSMQ 552

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNL-DCAFMVFNLMQDKDVISWTSLITG 411
            + G          + D+  + G L +    + N+        W SL+T 
Sbjct: 553 QEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPIAPTSRIWGSLLTA 602



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 135/308 (43%), Gaps = 35/308 (11%)

Query: 6   FKILNFSLRCRSKIIGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSD 64
             +L    +  S + G + + + V     P   L  AL++ +   G+++ + ++F +++D
Sbjct: 327 INLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITD 386

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
           +   +WN MIAAY      +EA  LF E   +  +                         
Sbjct: 387 KTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLY------------------------- 421

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
                 P  +T+  V+    L G +++ +Q H Y +K  +  +  ++  ++ MYA+C  I
Sbjct: 422 ------PDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNI 475

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
             +  +F   P GK+ ++W T+I GY+ +G G  A+E F +M+  G+E N+ TF S+LTA
Sbjct: 476 VASREIFDKMP-GKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTA 534

Query: 245 CAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI-DNEV 302
           C+       G +    +    G    +     + D+  + G+L    R +E   I     
Sbjct: 535 CSVSGLEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPIAPTSR 594

Query: 303 SWNSMIVG 310
            W S++  
Sbjct: 595 IWGSLLTA 602



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 6/146 (4%)

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
           SS S   SL+L +   G +++A   F  +          +I G A      +AL  Y  M
Sbjct: 52  SSGSRPKSLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAM 111

Query: 530 LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC--MIDLLGRS 587
           L  G +PD  TF  +L  C+ AG     R    ++ K+ G+  G D Y    ++ L  + 
Sbjct: 112 LDAGARPDRFTFPVVLKCCARAGALGEGRAAHAAVIKL-GL--GADVYTANSLVALYAKL 168

Query: 588 GKLIEAKALLDQMVGEPDATVWKALL 613
           G + +A+ + D M    D   W  ++
Sbjct: 169 GLVGDAERVFDGMPAR-DIVSWNTMV 193


>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 273/754 (36%), Positives = 396/754 (52%), Gaps = 83/754 (11%)

Query: 89  LFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL 148
           +F  +P  +   +S ++  YS  G   +   LF        RP  +    +++L      
Sbjct: 56  IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAG---- 111

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
            + G  FH Y +K     + F+   ++DMYAK   +  A  LF+   + +    W +MI+
Sbjct: 112 -KSGNMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAE-RTLADWNSMIS 169

Query: 209 GYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEA 268
           G  ++G   +A+  F  M                       AR                 
Sbjct: 170 GCWKSGNETEAVVLFNMM----------------------PAR----------------- 190

Query: 269 NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH 328
           N+   ++++  YAK GDL+SARR  +     + VSWN+M   +A++   KEAL+LF +M 
Sbjct: 191 NIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQML 250

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD 388
              I  DD T+   ++  +S  D   A S+  +I +       FV  AL+DM+AK GNL+
Sbjct: 251 EEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLE 310

Query: 389 CAFMVFNL--------------------------------MQDKDVISWTSLITGCAYHG 416
            A  +F+                                 M  +DV+SW S+I G A +G
Sbjct: 311 IARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNG 370

Query: 417 SYEEALKYFSDM-RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
               +++ F +M     I PD V ++S+LSAC  +  L+    V  +  +      +S  
Sbjct: 371 ESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGF 430

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           NSL+ +Y+KCG + DA+R+F +M TRDV+++  LI G A NG GKEA++    M   G +
Sbjct: 431 NSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIE 490

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           PD++T++G+L ACSHAGL    +  F+S+       P  DHYACM+DLLGR+G+L EAK 
Sbjct: 491 PDHVTYIGVLTACSHAGLLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKM 545

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
           L+  M  +P A V+ +LL+A R+H  + LGE AA+ LFELEP N   YV LSN+Y++ G+
Sbjct: 546 LIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGR 605

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
           WED  RVR++MK  G++K  G SWVE   QVH F   DR H    DIY  + E+   +K 
Sbjct: 606 WEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKR 665

Query: 716 AGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
            G+V D + AL +VEEE KE  L  HSEKLA+ F LL    G  IR+ KNLR+C DCHTA
Sbjct: 666 VGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCHTA 725

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +K IS +  R I++RD+NRFH F  G CSC DYW
Sbjct: 726 IKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 176/400 (44%), Gaps = 38/400 (9%)

Query: 34  KPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNET 93
           +  +D N  +     SG   EA  LF  M  R+  TW +M+  YA  G L  A++ F+E 
Sbjct: 159 RTLADWNSMISGCWKSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEM 218

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE 153
           P ++  +W+++   Y+      EA  LF QM  EG  P   T    +  CS  G     +
Sbjct: 219 PERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLAD 278

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAK------CKCIFE--------------------- 186
                  +    LN+FV T L+DM+AK       + IF+                     
Sbjct: 279 SILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRV 338

Query: 187 -----AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPS 240
                A  LF   P  ++ V+W +MI GY+QNG    +IE F++M     ++ ++ T  S
Sbjct: 339 GKLSLARELFDNMPK-RDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIAS 397

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           +L+AC  + A      V   +     +  +   ++LI MY+KCG +  A R+ +     +
Sbjct: 398 VLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRD 457

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
            VS+N++I GFA  G  KEA+ L   M    I+ D  TY  VL   +    LN  K+V  
Sbjct: 458 VVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFK 517

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
            I     + Y      ++D+  + G LD A M+   M  K
Sbjct: 518 SIQAPTVDHYA----CMVDLLGRAGELDEAKMLIQSMPMK 553



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 35/263 (13%)

Query: 32  SVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN 91
           S + A   N  +  ++  G++  A +LF+ M  RD  +WN+MIA YA +G    + +LF 
Sbjct: 321 SQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFK 380

Query: 92  ETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQR 151
           E                      I   ++         +P + T+ +VL  C   G L+ 
Sbjct: 381 EM---------------------ISCMDI---------QPDEVTIASVLSACGHIGALKL 410

Query: 152 GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYS 211
                    +    L       L+ MY+KC  + +A  +F+     ++ V++ T+I+G++
Sbjct: 411 SYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTM-GTRDVVSFNTLISGFA 469

Query: 212 QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVY 271
            NG+G +AI+    M  EG+E +  T+  +LTAC+     + G  V   I +   +    
Sbjct: 470 ANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQAPTVDH--- 526

Query: 272 VQSALIDMYAKCGDLDSARRLLE 294
             + ++D+  + G+LD A+ L++
Sbjct: 527 -YACMVDLLGRAGELDEAKMLIQ 548


>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 785

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 240/699 (34%), Positives = 390/699 (55%), Gaps = 7/699 (1%)

Query: 54  EAGQLFEKMSDRDGFTWNTMIAA-----YANSGRLREAKKLFNETPFKNFFTWSSLIYGY 108
           E G+    +   +G   + ++ A     Y N G L + +++F+       F W+ L+  Y
Sbjct: 74  EDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEY 133

Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA 168
           +  G   E+  LF +MQ  G R   YT   VL+  +    ++  ++ HGY +K  F    
Sbjct: 134 AKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYN 193

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
            VV  L+  Y KC  +  A  LF    D ++ V+W +MI+G + NG+    +E F  M  
Sbjct: 194 AVVNSLIAAYFKCGEVESARILFDELSD-RDVVSWNSMISGCTMNGFSRNGLEFFIQMLN 252

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
            GV+ +  T  ++L ACA V     G  +H   + +GF   V   + L+DMY+KCG+L+ 
Sbjct: 253 LGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNG 312

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
           A  +         VSW S+I    R+G H EA+ LF +M ++ ++ D +   SV++  A 
Sbjct: 313 ANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACAC 372

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
           +  L+  + VH+ I K        V+NAL++MYAK G+++ A ++F+ +  K+++SW ++
Sbjct: 373 SNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTM 432

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
           I G + +    EAL+ F DM+   + PD V ++ +L ACA L  LE G+++H   L+ G 
Sbjct: 433 IGGYSQNSLPNEALQLFLDMQ-KQLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGY 491

Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
            S L V  +LV +Y KCG +  A ++FD +  +D+I WT +I G   +G GKEA+  +++
Sbjct: 492 FSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEK 551

Query: 529 MLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSG 588
           M   G +P+  +F  +L+AC+H+GL +     F+SM     I+P  +HYACM+DLL RSG
Sbjct: 552 MRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSG 611

Query: 589 KLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSN 648
            L  A   ++ M  +PDA +W ALLS CR+H D+EL E+ A ++FELEP N   YV L+N
Sbjct: 612 NLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFELEPENTRYYVLLAN 671

Query: 649 MYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDE 708
           +Y+ A KWE+  ++++ +   G++ + GCSW+E   + +IF + D  HP    I S + +
Sbjct: 672 VYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAGDTSHPQAKMIDSLLRK 731

Query: 709 IMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAV 747
           + + +   GY   + +AL N ++  KE+ L  HSEKLA+
Sbjct: 732 LTMKMNRGGYSNKIKYALINADDRLKEVLLCAHSEKLAM 770



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 155/489 (31%), Positives = 260/489 (53%), Gaps = 16/489 (3%)

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           +VL+LC+    L+ G++ H         ++  +   LV MY  C  + +   +F    + 
Sbjct: 62  SVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILND 121

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           K  + W  +++ Y++ G   +++  F  M+  G+  + +TF  +L   AA +      +V
Sbjct: 122 KIFL-WNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRV 180

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           HG +L  GF +   V ++LI  Y KCG+++SAR L +     + VSWNSMI G    GF 
Sbjct: 181 HGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFS 240

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
           +  L  F +M    + +D  T  +VL   A+  +L   +++H+  VK GF G    NN L
Sbjct: 241 RNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTL 300

Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
           +DMY+K GNL+ A  VF  M +  ++SWTS+I      G + EA+  F +M+  G+ PD 
Sbjct: 301 LDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDI 360

Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
             V+S++ ACA    L+ G++VH    K+   S+L V N+L+ +YAKCG + +AN +F  
Sbjct: 361 YAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQ 420

Query: 498 MHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENA 557
           +  +++++W  +I G +QN    EALQ +  M  +  KPD +T   +L AC  AGLA   
Sbjct: 421 LPVKNIVSWNTMIGGYSQNSLPNEALQLFLDM-QKQLKPDDVTMACVLPAC--AGLAA-- 475

Query: 558 RWYFESMDKVYG--IKPG---PDHYAC-MIDLLGRSGKLIEAKALLDQMVGEPDATVWKA 611
               E   +++G  ++ G     H AC ++D+  + G L+ A+ L D M+ + D  +W  
Sbjct: 476 ---LEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFD-MIPKKDMILWTV 531

Query: 612 LLSACRVHG 620
           +++   +HG
Sbjct: 532 MIAGYGMHG 540



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 196/364 (53%), Gaps = 1/364 (0%)

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           T+ S+L  CA + + + G +VH  I S+G   +  + + L+ MY  CGDL   RR+ +  
Sbjct: 59  TYCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGI 118

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
             D    WN ++  +A+ G ++E++ LF+KM    I+ D +T+  VL  FA++  +   K
Sbjct: 119 LNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECK 178

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            VH  ++K GF  Y  V N+LI  Y K G ++ A ++F+ + D+DV+SW S+I+GC  +G
Sbjct: 179 RVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNG 238

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
                L++F  M   G+  D   + ++L ACA +  L  G+ +HA  +K+G    +  +N
Sbjct: 239 FSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNN 298

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           +L+ +Y+KCG +N AN VF  M    +++WT++I    + G   EA+  +D+M ++G +P
Sbjct: 299 TLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRP 358

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           D      ++ AC+ +   +  R     + K       P   A M ++  + G + EA  +
Sbjct: 359 DIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALM-NMYAKCGSMEEANLI 417

Query: 597 LDQM 600
             Q+
Sbjct: 418 FSQL 421



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 129/403 (32%), Positives = 206/403 (51%), Gaps = 11/403 (2%)

Query: 28  NVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTW-----NTMIAAYANSGR 82
           N+G  V  A+ +N  LV  +N G +   G+       + GF+      NT++  Y+  G 
Sbjct: 252 NLGVDVDSATLVN-VLVACANVGNLT-LGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGN 309

Query: 83  LREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRL 142
           L  A ++F +       +W+S+I  +   GL  EA  LF +MQ +G RP  Y + +V+  
Sbjct: 310 LNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHA 369

Query: 143 CSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVA 202
           C+    L +G + H +  K     N  V   L++MYAKC  + EA  +F   P  KN V+
Sbjct: 370 CACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPV-KNIVS 428

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
           W TMI GYSQN    +A++ F DM+ + ++ +  T   +L ACA ++A + G ++HG IL
Sbjct: 429 WNTMIGGYSQNSLPNEALQLFLDMQKQ-LKPDDVTMACVLPACAGLAALEKGREIHGHIL 487

Query: 263 SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
             G+ ++++V  AL+DMY KCG L  A++L +     + + W  MI G+   GF KEA+S
Sbjct: 488 RKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAIS 547

Query: 323 LFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMY 381
            F+KM    I+ ++ ++ S+L  C  S +     K   S+  +   E        ++D+ 
Sbjct: 548 TFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLL 607

Query: 382 AKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGSYEEALK 423
            + GNL  A+     M  K D   W +L++GC  H   E A K
Sbjct: 608 IRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEK 650


>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 237/674 (35%), Positives = 385/674 (57%), Gaps = 12/674 (1%)

Query: 40  NRALVDFSNSGEIDEA-GQLFEKMSDRDGFTWN-----TMIAAYANSGRLREAKKLFN-- 91
           NR L   +    ++E  G+L  +     G   N     ++I  Y +    + AK +F   
Sbjct: 197 NRCLARVTAGSALEELLGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTI 256

Query: 92  ETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGY-RPSQYTLDNVLRLCSLKGLLQ 150
           E P  +   W+ L+   +   + IE  E+F ++    Y +P  +T  +VL+ CS  G + 
Sbjct: 257 ENPL-DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVG 315

Query: 151 RGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
            G+  H + IK+ F ++  V++  V MYAKC    +A  LF   P+ ++  +W  +I+ Y
Sbjct: 316 YGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPE-RDVASWNNVISCY 374

Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV 270
            Q+G   KA+E F +M+V G + +  T  +++++CA +   + G ++H  ++ SGF  + 
Sbjct: 375 YQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDG 434

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
           +V SAL+DMY KCG L+ A+ + E  +  N VSWNSMI G++ +G  K  + LF++M   
Sbjct: 435 FVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEE 494

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
            I+    T  S+L   + +++L   K +H  I++   E   FVN++LID+Y K GN+  A
Sbjct: 495 GIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSA 554

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
             VF  M   +V+SW  +I+G    GSY EAL  F+DMR +G+ PD +  +S+L AC++L
Sbjct: 555 ENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQL 614

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
            VLE G+++H   ++S    +  V  +L+ +YAKCG +++A  +F+ +  RD ++WT++I
Sbjct: 615 AVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMI 674

Query: 511 MGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGI 570
                +G+  EAL+ +++M     KPD +TF+ +L ACSHAGL +   +YF  M   YG 
Sbjct: 675 AAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGF 734

Query: 571 KPGPDHYACMIDLLGRSGKLIEAKALLDQMVG-EPDATVWKALLSACRVHGDLELGERAA 629
           KP  +HY+C+IDLLGR G+L EA  +L +      D  +   L SAC +H  L+LGE+  
Sbjct: 735 KPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIG 794

Query: 630 NNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIF 689
             L E +P +   Y+ LSNMY++  KW++  +VR  +K  G++K PGCSW+E   ++H F
Sbjct: 795 RLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPF 854

Query: 690 ISEDRGHPLRTDIY 703
           + ED+ HP    IY
Sbjct: 855 VVEDKSHPQADMIY 868


>gi|356570490|ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Glycine max]
          Length = 582

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 233/563 (41%), Positives = 347/563 (61%), Gaps = 13/563 (2%)

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           G Q+HG ++  GFEA   V   LI+ Y+K     S+ +L +     +  +W+S+I  FA+
Sbjct: 26  GLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHKSATTWSSVISSFAQ 85

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
                 AL  F++M    +  DD T P+     A+   L  A S+H+L +KT      FV
Sbjct: 86  NDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHALSLKTAHHHDVFV 145

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS------- 426
            ++L+D YAK G+++ A  VF+ M  K+V+SW+ +I G +  G  EEAL  F        
Sbjct: 146 GSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFKRALEQDY 205

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
           D+R++        +SS+L  C+  T+ E G+QVH +  K+   SS  V +SL+ +Y+KCG
Sbjct: 206 DIRVNDF-----TLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISLYSKCG 260

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
            +    +VF+ +  R++  W A+++ CAQ+       + +++M   G KP++ITF+ LL+
Sbjct: 261 VVEGGYKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLCLLY 320

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ACSHAGL E     F  M K +GI+PG  HYA ++DLLGR+GKL EA  ++ +M  +P  
Sbjct: 321 ACSHAGLVEKGEHCFGLM-KEHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQPTE 379

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
           +VW ALL+ CR+HG+ EL    A+ +FE+  +++   V LSN Y+ AG+WE+AAR RK+M
Sbjct: 380 SVWGALLTGCRIHGNTELASFVADKVFEMGAVSSGIQVLLSNAYAAAGRWEEAARARKMM 439

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFAL 726
           + +GI+KE G SWVE  ++VH F + DR H    +IY K++E+   + +AGYV D +F L
Sbjct: 440 RDQGIKKETGLSWVEEGNRVHTFAAGDRSHGKTREIYEKLEELGEEMAKAGYVADTSFVL 499

Query: 727 HNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRH 786
             V+ + K   + YHSE+LA+AFGL+T P   PIR+ KNLRVCGDCHTA+K+IS    R 
Sbjct: 500 KEVDGDEKSQTIRYHSERLAIAFGLITFPPEWPIRVMKNLRVCGDCHTAIKFISKCTGRV 559

Query: 787 IILRDSNRFHHFKAGNCSCGDYW 809
           II+RD+NRFH F+ G C+CGDYW
Sbjct: 560 IIVRDNNRFHRFEDGKCTCGDYW 582



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 199/388 (51%), Gaps = 4/388 (1%)

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
           L++G Q HG  IK  F+    V   L++ Y+K      +  LF  FP  K+   W+++I+
Sbjct: 23  LRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPH-KSATTWSSVIS 81

Query: 209 GYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEA 268
            ++QN     A+  FR M   G+  +  T P+   + AA+S+      +H   L +    
Sbjct: 82  SFAQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHALSLKTAHHH 141

Query: 269 NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH 328
           +V+V S+L+D YAKCGD++ AR++ +     N VSW+ MI G+++ G  +EAL+LFK+  
Sbjct: 142 DVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFKRAL 201

Query: 329 AR--DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
            +  DI+++DFT  SVL   +++      K VH L  KT F+   FV ++LI +Y+K G 
Sbjct: 202 EQDYDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISLYSKCGV 261

Query: 387 LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSA 446
           ++  + VF  ++ +++  W +++  CA H       + F +M   G+ P+ +    +L A
Sbjct: 262 VEGGYKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLCLLYA 321

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT- 505
           C+   ++E G+    +  + G         +LV +  + G + +A  V   M  +   + 
Sbjct: 322 CSHAGLVEKGEHCFGLMKEHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQPTESV 381

Query: 506 WTALIMGCAQNGKGKEALQFYDQMLARG 533
           W AL+ GC  +G  + A    D++   G
Sbjct: 382 WGALLTGCRIHGNTELASFVADKVFEMG 409



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 190/396 (47%), Gaps = 18/396 (4%)

Query: 38  DLNRALVDFSNSGEIDEA----GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNET 93
           D+ + LV F+++  + +     GQ+ +   +      + +I  Y+ +     + KLF+  
Sbjct: 9   DICKVLVWFTHTRSLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSF 68

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE 153
           P K+  TWSS+I  ++   L + A   F +M   G  P  +TL    +  +    L    
Sbjct: 69  PHKSATTWSSVISSFAQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLAL 128

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQN 213
             H  ++KT    + FV + LVD YAKC  +  A  +F   P  KN V+W+ MI GYSQ 
Sbjct: 129 SLHALSLKTAHHHDVFVGSSLVDTYAKCGDVNLARKVFDEMPH-KNVVSWSGMIYGYSQM 187

Query: 214 GYGFKAIECFR-------DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF 266
           G   +A+  F+       D+RV     N FT  S+L  C+A +  + G QVHG    + F
Sbjct: 188 GLDEEALNLFKRALEQDYDIRV-----NDFTLSSVLRVCSASTLFELGKQVHGLCFKTSF 242

Query: 267 EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK 326
           +++ +V S+LI +Y+KCG ++   ++ E  ++ N   WN+M++  A+         LF++
Sbjct: 243 DSSCFVASSLISLYSKCGVVEGGYKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEE 302

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
           M    +K +  T+  +L   +    +   +    L+ + G E        L+D+  + G 
Sbjct: 303 MERVGVKPNFITFLCLLYACSHAGLVEKGEHCFGLMKEHGIEPGSQHYATLVDLLGRAGK 362

Query: 387 LDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEA 421
           L+ A +V   M  +   S W +L+TGC  HG+ E A
Sbjct: 363 LEEAVLVIKEMPMQPTESVWGALLTGCRIHGNTELA 398



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 175/391 (44%), Gaps = 38/391 (9%)

Query: 342 VLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
           VL  F     L     +H  ++K GFE    V + LI+ Y+K      +  +F+    K 
Sbjct: 13  VLVWFTHTRSLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHKS 72

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
             +W+S+I+  A +     AL++F  M   G+ PD   + +   + A L+ L     +HA
Sbjct: 73  ATTWSSVISSFAQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHA 132

Query: 462 VFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKE 521
           + LK+     + V +SLV  YAKCG +N A +VFD M  ++V++W+ +I G +Q G  +E
Sbjct: 133 LSLKTAHHHDVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEE 192

Query: 522 ALQFYDQMLAR--GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGI--KPGPDHY 577
           AL  + + L +    + +  T   +L  CS + L       FE   +V+G+  K   D  
Sbjct: 193 ALNLFKRALEQDYDIRVNDFTLSSVLRVCSASTL-------FELGKQVHGLCFKTSFDSS 245

Query: 578 ----ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLF 633
               + +I L  + G ++E    + + V   +  +W A+L AC  H       R      
Sbjct: 246 CFVASSLISLYSKCG-VVEGGYKVFEEVKVRNLGMWNAMLIACAQHAHT---GRTFELFE 301

Query: 634 ELEPMNAMP----YVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIF 689
           E+E +   P    ++ L    S AG  E       LMK  GI  EPG       SQ +  
Sbjct: 302 EMERVGVKPNFITFLCLLYACSHAGLVEKGEHCFGLMKEHGI--EPG-------SQHYAT 352

Query: 690 ISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
           + +  G         K++E +L+IKE    P
Sbjct: 353 LVDLLGRA------GKLEEAVLVIKEMPMQP 377


>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 273/754 (36%), Positives = 396/754 (52%), Gaps = 83/754 (11%)

Query: 89  LFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL 148
           +F  +P  +   +S ++  YS  G   +   LF        RP  +    +++L      
Sbjct: 56  IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAG---- 111

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
            + G  FH Y +K     + F+   ++DMYAK   +  A  LF+   + +    W +MI+
Sbjct: 112 -KSGNLFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAE-RTLADWNSMIS 169

Query: 209 GYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEA 268
           G  ++G   +A+  F  M                       AR                 
Sbjct: 170 GCWKSGNETEAVVLFNMM----------------------PAR----------------- 190

Query: 269 NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH 328
           N+   ++++  YAK GDL+SARR  +     + VSWN+M   +A++   KEAL+LF +M 
Sbjct: 191 NIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQML 250

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD 388
              I  DD T+   ++  +S  D   A S+  +I +       FV  AL+DM+AK GNL+
Sbjct: 251 EEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLE 310

Query: 389 CAFMVFNL--------------------------------MQDKDVISWTSLITGCAYHG 416
            A  +F+                                 M  +DV+SW S+I G A +G
Sbjct: 311 IARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNG 370

Query: 417 SYEEALKYFSDM-RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
               +++ F +M     I PD V ++S+LSAC  +  L+    V  +  +      +S  
Sbjct: 371 ESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGF 430

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           NSL+ +Y+KCG + DA+R+F +M TRDV+++  LI G A NG GKEA++    M   G +
Sbjct: 431 NSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIE 490

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           PD++T++G+L ACSHAGL    +  F+S+       P  DHYACM+DLLGR+G+L EAK 
Sbjct: 491 PDHVTYIGVLTACSHAGLLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAGELDEAKM 545

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
           L+  M  +P A V+ +LL+A R+H  + LGE AA+ LFELEP N   YV LSN+Y++ G+
Sbjct: 546 LIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGR 605

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
           WED  RVR++MK  G++K  G SWVE   QVH F   DR H    DIY  + E+   +K 
Sbjct: 606 WEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAELERKMKR 665

Query: 716 AGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
            G+V D + AL +VEEE KE  L  HSEKLA+ F LL    G  IR+ KNLR+C DCHTA
Sbjct: 666 VGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALLISEVGTTIRVVKNLRICLDCHTA 725

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +K IS +  R I++RD+NRFH F  G CSC DYW
Sbjct: 726 IKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 176/400 (44%), Gaps = 38/400 (9%)

Query: 34  KPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNET 93
           +  +D N  +     SG   EA  LF  M  R+  TW +M+  YA  G L  A++ F+E 
Sbjct: 159 RTLADWNSMISGCWKSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEM 218

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE 153
           P ++  +W+++   Y+      EA  LF QM  EG  P   T    +  CS  G     +
Sbjct: 219 PERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLAD 278

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAK------CKCIFE--------------------- 186
                  +    LN+FV T L+DM+AK       + IF+                     
Sbjct: 279 SILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRV 338

Query: 187 -----AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPS 240
                A  LF   P  ++ V+W +MI GY+QNG    +IE F++M     ++ ++ T  S
Sbjct: 339 GKLSLARELFDNMPK-RDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIAS 397

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           +L+AC  + A      V   +     +  +   ++LI MY+KCG +  A R+ +     +
Sbjct: 398 VLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRD 457

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
            VS+N++I GFA  G  KEA+ L   M    I+ D  TY  VL   +    LN  K+V  
Sbjct: 458 VVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFK 517

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
            I     + Y      ++D+  + G LD A M+   M  K
Sbjct: 518 SIQAPTVDHYA----CMVDLLGRAGELDEAKMLIQSMPMK 553



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 35/263 (13%)

Query: 32  SVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN 91
           S + A   N  +  ++  G++  A +LF+ M  RD  +WN+MIA YA +G    + +LF 
Sbjct: 321 SQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFK 380

Query: 92  ETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQR 151
           E                      I   ++         +P + T+ +VL  C   G L+ 
Sbjct: 381 EM---------------------ISCMDI---------QPDEVTIASVLSACGHIGALKL 410

Query: 152 GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYS 211
                    +    L       L+ MY+KC  + +A  +F+     ++ V++ T+I+G++
Sbjct: 411 SYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTM-GTRDVVSFNTLISGFA 469

Query: 212 QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVY 271
            NG+G +AI+    M  EG+E +  T+  +LTAC+     + G  V   I +   +    
Sbjct: 470 ANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQAPTVDH--- 526

Query: 272 VQSALIDMYAKCGDLDSARRLLE 294
             + ++D+  + G+LD A+ L++
Sbjct: 527 -YACMVDLLGRAGELDEAKMLIQ 548


>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 637

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 224/572 (39%), Positives = 341/572 (59%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           F  IL  CA   A       HG  +    + +V + + LI+ Y+KCG ++ AR++ +   
Sbjct: 66  FIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGML 125

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
             + VSWN+MI  + R     EAL +F +M     K  +FT  SVL+   +N D    K 
Sbjct: 126 ERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKK 185

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           +H L +KT  +   +V  AL+D+YAK G ++ A  VF  MQDK  ++W+S++ G     +
Sbjct: 186 LHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKN 245

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
           YEEAL  +   +   +  +   +SS++ AC+ L  L  G+Q+HAV  KSG  S++ V +S
Sbjct: 246 YEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASS 305

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
            V +YAKCG + ++  +F  +  +++  W  +I G A++ + KE +  +++M   G  P+
Sbjct: 306 AVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPN 365

Query: 538 YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALL 597
            +TF  LL  C H GL E  R +F+ M   YG+ P   HY+CM+D+LGR+G L EA  L+
Sbjct: 366 EVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELI 425

Query: 598 DQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWE 657
             +  EP A++W +LL++CRV  +LEL E AA  LFELEP NA  +V LSN+Y+   +WE
Sbjct: 426 KSIPFEPTASIWGSLLASCRVCKNLELAEVAAKKLFELEPENAGNHVLLSNIYAANKQWE 485

Query: 658 DAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAG 717
           + A+ RKL++   ++K  G SW++   +VHIF   +  HP   +I + +D +++ +++ G
Sbjct: 486 EIAKSRKLLRDCDVKKVRGQSWIDIKDKVHIFRVGESSHPRIREICTMLDNLVIELRKFG 545

Query: 718 YVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMK 777
           Y P +   LH+VE   KE  L  HSEKLA+ FGL+ LP+G+ +RI KNLR+C DCH  MK
Sbjct: 546 YKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPEGSTVRIMKNLRICVDCHEFMK 605

Query: 778 YISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             S    R II+RD+NRFHHF  G+CSCG++W
Sbjct: 606 AASMATRRFIIVRDANRFHHFSDGHCSCGEFW 637



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 226/437 (51%), Gaps = 15/437 (3%)

Query: 20  IGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEA----GQLFEKMSDRDGFTWNTMIA 75
           + P RY+     +V  ASD    L   + +G + EA    G+        D    N +I 
Sbjct: 49  LSPGRYSDEF--NVVQASDFIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLIN 106

Query: 76  AYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYT 135
           AY+  G +  A+++F+    ++  +W+++I  Y+   ++ EA ++FW+M+ EG++ S++T
Sbjct: 107 AYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFT 166

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
           + +VL  C         ++ H  ++KT  DLN +V T L+D+YAKC  I +A  +F+   
Sbjct: 167 ISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQ 226

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGA 255
           D K+ V W++M+ GY Q+    +A+  +R  +   +E NQFT  S++ AC+ ++A   G 
Sbjct: 227 D-KSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGK 285

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
           Q+H  I  SGF +NV+V S+ +DMYAKCG L  +  +    +  N   WN++I GFA+  
Sbjct: 286 QMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHA 345

Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT-GFEGYKFVN 374
             KE + LF+KM    +  ++ T+ S+L+       +   +    L+  T G        
Sbjct: 346 RPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHY 405

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEALKYFSDMRISGI 433
           + ++D+  + G L  A+ +   +  +   S W SL+  C    + E  L   +  ++  +
Sbjct: 406 SCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLASCRVCKNLE--LAEVAAKKLFEL 463

Query: 434 CPD----HVVVSSILSA 446
            P+    HV++S+I +A
Sbjct: 464 EPENAGNHVLLSNIYAA 480


>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Cucumis sativus]
 gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Cucumis sativus]
          Length = 642

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/666 (36%), Positives = 381/666 (57%), Gaps = 46/666 (6%)

Query: 149 LQRGEQFHGYAIKTCFDLNAF-VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNH--VAWTT 205
           L+  +Q      KTC  LN++ +V+G + ++          Y  ++F D +N     + T
Sbjct: 18  LRTVKQIQALIFKTC--LNSYPLVSGKLLLHCAVTLPDSLHYARRLFLDIRNPDVFMYNT 75

Query: 206 MITGYSQNGYGFKAIECFRDMRVEGVE-SNQFTFPSILTACAAVSARDFGAQVHGCILSS 264
           +I G S +     A++ F +MR + V   + F+F  +L A A   A   G Q+H   +  
Sbjct: 76  LIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNGLQLHCLAVGY 135

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLF 324
           G +++++V + LI MYA+C  L  AR++ +     N V+WN+++    R    K+A  +F
Sbjct: 136 GLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFRCEGVKDAEQVF 195

Query: 325 KKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
           + M  R++                                T +       N ++  Y K 
Sbjct: 196 RCMPIRNL--------------------------------TSW-------NIMLAGYTKA 216

Query: 385 GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
           G L  A  VF  M  KD +SW+++I G A++G++ +A  +F ++R  G+ P+ V ++ +L
Sbjct: 217 GELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVL 276

Query: 445 SACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVI 504
           SACA+    EFG+ +H    KSG    +SV+N+L+  Y+KCG ++ A  VFD+M  R  +
Sbjct: 277 SACAQAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAV 336

Query: 505 TWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESM 564
           +WTA+I G A +G G+EA++ +++M     KPD ITF+ +L+ACSHAGL +    YF  M
Sbjct: 337 SWTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRM 396

Query: 565 DKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLEL 624
              YGI+P  +HY CM+DL GR+GKL +A   + QM   P+  VW+ LL AC +HG+L L
Sbjct: 397 VNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYL 456

Query: 625 GERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNS 684
             +    L EL+P N+  +V LSN+Y+ AGKW+D A +R+ M  + ++K PG S +E N 
Sbjct: 457 AGQVKRQLSELDPENSGDHVLLSNIYAVAGKWKDVAALRRSMTHQRLKKTPGWSMIEVNR 516

Query: 685 QVHIFISEDRGHPLRTDIYSKIDEIMLLIK-EAGYVPDMNFALHNVEEEGKEIGLAYHSE 743
            ++ F++ ++ + +  + + K+ EIM  ++ E GYVP++   LH++E E KE  ++ HSE
Sbjct: 517 IIYSFVAGEKQNDIAVEAHQKLREIMSRLRIEGGYVPEVGSVLHDIEVEEKEDSVSQHSE 576

Query: 744 KLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNC 803
           KLAVAFG+  LP+G  IR+ KNLR+C DCHT MK IS VY   I++RD +RFH F  G+C
Sbjct: 577 KLAVAFGMAKLPRGRAIRVVKNLRICRDCHTVMKLISKVYEVEIVVRDRSRFHSFTHGSC 636

Query: 804 SCGDYW 809
           SC DYW
Sbjct: 637 SCRDYW 642



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 197/429 (45%), Gaps = 70/429 (16%)

Query: 83  LREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR-PSQYTLDNVLR 141
           L  A++LF +    + F +++LI G S+      A +LF +M+ +    P  ++   +L+
Sbjct: 55  LHYARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLK 114

Query: 142 LCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF---------------- 185
             +    L  G Q H  A+    D + FV T L+ MYA+C C+                 
Sbjct: 115 AAANCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVA 174

Query: 186 ---------------EAEYLFKMFP------------------------------DGKNH 200
                          +AE +F+  P                                K+ 
Sbjct: 175 WNAIVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDD 234

Query: 201 VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
           V+W+TMI G++ NG    A   FR++R EG+  N+ +   +L+ACA   A +FG  +HG 
Sbjct: 235 VSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGF 294

Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEA 320
           +  SGF   + V +ALID Y+KCG+LD AR + +     + VSW +MI G A  G+ +EA
Sbjct: 295 VEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEA 354

Query: 321 LSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT-GFEGYKFVNNALID 379
           + LF +M   +IK D  T+ S+L   +    ++   S  S +V T G E        ++D
Sbjct: 355 IRLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVD 414

Query: 380 MYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP--- 435
           +Y + G L  A+  V  +    + I W +L+  C+ HG+   A +     ++S + P   
Sbjct: 415 LYGRAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQV--KRQLSELDPENS 472

Query: 436 -DHVVVSSI 443
            DHV++S+I
Sbjct: 473 GDHVLLSNI 481



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 130/278 (46%), Gaps = 34/278 (12%)

Query: 33  VKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE 92
           ++  +  N  L  ++ +GE+  A ++F KM  +D  +W+TMI  +A++G        FN 
Sbjct: 200 IRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGN-------FN- 251

Query: 93  TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
                                  +AF  F +++ EG RP++ +L  VL  C+  G  + G
Sbjct: 252 -----------------------DAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFG 288

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
              HG+  K+ F     V   L+D Y+KC  +  A  +F      ++ V+WT MI G + 
Sbjct: 289 RILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLR-RSAVSWTAMIAGMAM 347

Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVY 271
           +GYG +AI  F +M    ++ +  TF SIL AC+     D G      ++++ G E  + 
Sbjct: 348 HGYGEEAIRLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIE 407

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
               ++D+Y + G L  A   +    I  N++ W +++
Sbjct: 408 HYGCMVDLYGRAGKLQQAYDFVCQMPISPNDIVWRTLL 445



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 126/292 (43%), Gaps = 19/292 (6%)

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ--GNLDCAFMVFNLMQDK 400
           L  F+    L   K + +LI KT    Y  V+  L+   A     +L  A  +F  +++ 
Sbjct: 9   LALFSKCKSLRTVKQIQALIFKTCLNSYPLVSGKLLLHCAVTLPDSLHYARRLFLDIRNP 68

Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRISGIC-PDHVVVSSILSACAELTVLEFGQQV 459
           DV  + +LI G +   +   AL+ F +MR   +  PD    + +L A A    L  G Q+
Sbjct: 69  DVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNGLQL 128

Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKG 519
           H + +  G  S L V  +L+ +YA+C C+  A +VFD M   +++ W A++  C +    
Sbjct: 129 HCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFRCEGV 188

Query: 520 KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD--HY 577
           K+A Q +  M  R      I   G     + AG  + AR  F  M       P  D   +
Sbjct: 189 KDAEQVFRCMPIRNLTSWNIMLAGY----TKAGELQLAREVFMKM-------PLKDDVSW 237

Query: 578 ACMIDLLGRSGKLIEAKALLDQMVGE---PDATVWKALLSACRVHGDLELGE 626
           + MI     +G   +A A   ++  E   P+      +LSAC   G  E G 
Sbjct: 238 STMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGR 289


>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 874

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/685 (35%), Positives = 374/685 (54%), Gaps = 38/685 (5%)

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKCKC--IFEAEYLFKMFPDGKNHVAWTTMITGYS 211
           Q H   IKT    N   +T ++      +   ++ A  +F   P     + W TMI GYS
Sbjct: 53  QIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPSVFI-WNTMIKGYS 111

Query: 212 QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF-EANV 270
           +       +  ++ M V  ++ + FTFP +L       A  +G  +    +  GF ++N+
Sbjct: 112 RINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHGFLDSNL 171

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
           +VQ   I +++ CG ++ AR++ +  +    V+WN ++ G+ R   ++E+  LF +M  +
Sbjct: 172 FVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKK 231

Query: 331 D--IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF-EGYKFVNNALIDMYAKQGNL 387
              +  +  T   +L+  +   DL   K +++  +K G  E    + NALIDM+A  G +
Sbjct: 232 CECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEM 291

Query: 388 DCAFMVFNLMQDKDVISWTSLITGCA-------------------------------YHG 416
           D A  VF+ M+ +DVISWTS++TG A                                  
Sbjct: 292 DAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMN 351

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
            ++E L  F DM++S + PD   + SIL+ACA L  LE G+       K+   +   + N
Sbjct: 352 RFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGN 411

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           +L+ +Y KCG +  A ++F+ M  +D  TWTA+I+G A NG G+EAL  +  ML     P
Sbjct: 412 ALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTP 471

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           D IT++G++ AC+H GL    + +F +M   +GIKP   HY CM+DLLGR+G L EA  +
Sbjct: 472 DEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEV 531

Query: 597 LDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
           +  M  +P++ VW +LL ACRVH +++L E AAN + ELEP N   YV L N+Y+   KW
Sbjct: 532 IMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYAACKKW 591

Query: 657 EDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA 716
           ++   VRK+M  RGI+K PGCS +E N  V+ F++ D+ HP   +IY+K++ +   +  A
Sbjct: 592 KNLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLENMKQDLSNA 651

Query: 717 GYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAM 776
           GY PD +    +V EE KE  L  HSEKLA+A+ L++  +G  IRI KNLR+C DCH   
Sbjct: 652 GYSPDTSEVFLDVGEEDKETALYMHSEKLAIAYALISSGKGVTIRIVKNLRMCVDCHHMA 711

Query: 777 KYISAVYLRHIILRDSNRFHHFKAG 801
             +S VY R +I+RD  RFHHF+ G
Sbjct: 712 MVVSKVYNRELIVRDKTRFHHFRHG 736



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 144/536 (26%), Positives = 251/536 (46%), Gaps = 48/536 (8%)

Query: 80  SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
           SG +  A+K+F+E P  + F W+++I GYS          L+  M +   +P  +T   +
Sbjct: 82  SGDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFL 141

Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCF-DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
           L+  +    L+ G+    +A+   F D N FV  G + +++ C  +  A  +F M  DG 
Sbjct: 142 LKGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDM-GDGW 200

Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDM--RVEGVESNQFTFPSILTACAAVSARDFGAQ 256
             V W  +++GY++     ++   F +M  + E V  N  T   +L+AC+ +     G  
Sbjct: 201 EVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKC 260

Query: 257 VHGCILSSGF-EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA--- 312
           ++   +  G  E N+ +++ALIDM+A CG++D+AR + +  +  + +SW S++ GFA   
Sbjct: 261 IYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTC 320

Query: 313 ----------------------------RQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
                                       R    KE L+LF+ M   ++K D+FT  S+L 
Sbjct: 321 RIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILT 380

Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
             A    L   +   + I K   +   F+ NALIDMY K GN++ A  +FN MQ KD  +
Sbjct: 381 ACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFT 440

Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA-VF 463
           WT++I G A +G  EEAL  FS M  + + PD +    ++ AC  + ++  G+   + + 
Sbjct: 441 WTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMA 500

Query: 464 LKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEA 522
           ++ G   +L+    +V +  + G + +A  V  +M  + + I W +L+  C  +   + A
Sbjct: 501 VQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLA 560

Query: 523 LQFYDQMLARGTKPD----YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
               +++L    +P+    Y+    +  AC       N R     M    GIK  P
Sbjct: 561 EMAANEILE--LEPENGAVYVLLCNIYAACKKWKNLHNVR----KMMMERGIKKIP 610



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 117/459 (25%), Positives = 217/459 (47%), Gaps = 55/459 (11%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D + F     I  ++  G +  A+K+F+        TW+ ++ GY+ +    E+  LF +
Sbjct: 168 DSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIE 227

Query: 124 MQ--LEGYRPSQYTLDNVLRLCS-LKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK 180
           M+   E   P+  TL  +L  CS LK L+     ++ Y  +   + N  +   L+DM+A 
Sbjct: 228 MEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFAS 287

Query: 181 C------KCIFE-------------------------AEYLFKMFPDGKNHVAWTTMITG 209
           C      + +F+                         A   F   P+ +++V+WT MI G
Sbjct: 288 CGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPE-RDYVSWTAMIDG 346

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
           Y +     + +  FRDM++  V+ ++FT  SILTACA + A + G      I  +  + +
Sbjct: 347 YLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKND 406

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA 329
            ++ +ALIDMY KCG+++ A+++    +  ++ +W +MIVG A  G  +EAL++F  M  
Sbjct: 407 TFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLE 466

Query: 330 RDIKIDDFTYPSVLNCFASNIDLNNAKSVH---SLIVKTGFEGYKFVNNALIDMYAKQGN 386
             +  D+ TY  V+ C  +++ L  AK  H   ++ V+ G +        ++D+  + G+
Sbjct: 467 ASVTPDEITYIGVM-CACTHVGL-VAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGH 524

Query: 387 LDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD----HVVVS 441
           L  A  ++ N+    + I W SL+  C  H + +  L   +   I  + P+    +V++ 
Sbjct: 525 LKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQ--LAEMAANEILELEPENGAVYVLLC 582

Query: 442 SILSACAELTVLEFGQQVHAVFLKSG-----GCSSLSVD 475
           +I +AC +   L     V  + ++ G     GCS + ++
Sbjct: 583 NIYAACKKWKNL---HNVRKMMMERGIKKIPGCSLMEMN 618



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 143/279 (51%), Gaps = 4/279 (1%)

Query: 33  VKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN 91
           V+P   L  AL+D F++ GE+D A  +F++M  RD  +W +++  +AN+ R+  A+K F+
Sbjct: 271 VEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFD 330

Query: 92  ETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQR 151
           + P +++ +W+++I GY       E   LF  MQ+   +P ++T+ ++L  C+  G L+ 
Sbjct: 331 QMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALEL 390

Query: 152 GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYS 211
           GE    Y  K     + F+   L+DMY KC  + +A+ +F      K+   WT MI G +
Sbjct: 391 GEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEM-QKKDKFTWTAMIVGLA 449

Query: 212 QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI-LSSGFEANV 270
            NG+G +A+  F  M    V  ++ T+  ++ AC  V     G      + +  G + N+
Sbjct: 450 NNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNL 509

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
                ++D+  + G L  A  ++    +  N + W S++
Sbjct: 510 THYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLL 548


>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
 gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 727

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 238/676 (35%), Positives = 377/676 (55%), Gaps = 9/676 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYG---LDIEAFELFWQMQLE 127
           N ++  YA  G+L +A  +FN    K+  +W+SLI GYS  G         +LF +M+ +
Sbjct: 53  NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ 112

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
              P+ YTL  + +  S       G Q H   +K     + +V T LV MY K   + + 
Sbjct: 113 DILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDG 172

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR---DMRVEGVESNQFTFPSILTA 244
             +F   P+ +N   W+TM++GY+  G   +AI+ F      + EG +S+ + F ++L++
Sbjct: 173 LKVFAYMPE-RNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSS 230

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
            AA      G Q+H   + +G    V + +AL+ MY+KC  L+ A ++ + S   N ++W
Sbjct: 231 LAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITW 290

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           ++M+ G+++ G   EA+ LF +M +  IK  ++T   VLN  +    L   K +HS ++K
Sbjct: 291 SAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK 350

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
            GFE + F   AL+DMYAK G L  A   F+ +Q++DV  WTSLI+G   +   EEAL  
Sbjct: 351 LGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALIL 410

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           +  M+ +GI P+   ++S+L AC+ L  LE G+QVH   +K G    + + ++L  +Y+K
Sbjct: 411 YRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSK 470

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           CG + D N VF     +DV++W A+I G + NG+G EAL+ +++MLA G +PD +TFV +
Sbjct: 471 CGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNI 530

Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
           + ACSH G  E   +YF  M    G+ P  DHYACM+DLL R+G+L EAK  ++    + 
Sbjct: 531 ISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDH 590

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
              +W+ LLSAC+ HG  ELG  A   L  L    +  YVQLS +Y+  G+  D  RV K
Sbjct: 591 GLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWK 650

Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
            M++ G+ KE GCSW+E  +Q H+F+  D  HP+  +    +  +   + E G+V  ++ 
Sbjct: 651 HMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFVTVLDS 710

Query: 725 ALHNVEEEGKEIGLAY 740
           +    EEEG ++  ++
Sbjct: 711 SFVE-EEEGTQLSTSF 725



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 160/551 (29%), Positives = 275/551 (49%), Gaps = 21/551 (3%)

Query: 6   FKILNFSLRCRSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSD- 64
           + ++      R++ I P  YT  +    K  S L  + V         +A  L  KMS  
Sbjct: 100 YTVMQLFREMRAQDILPNAYT--LAGIFKAESSLQSSTVG-------RQAHALVVKMSSF 150

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGL---DIEAFELF 121
            D +   +++  Y  +G + +  K+F   P +N +TWS+++ GY+  G     I+ F LF
Sbjct: 151 GDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLF 210

Query: 122 WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
            + + EG   S Y    VL   +    +  G Q H   IK        +   LV MY+KC
Sbjct: 211 LREKEEG-SDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKC 269

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
           + + EA  +F    D +N + W+ M+TGYSQNG   +A++ F  M   G++ +++T   +
Sbjct: 270 ESLNEACKMFDSSGD-RNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGV 328

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           L AC+ +   + G Q+H  +L  GFE +++  +AL+DMYAK G L  AR+  +  +  + 
Sbjct: 329 LNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDV 388

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
             W S+I G+ +   ++EAL L+++M    I  +D T  SVL   +S   L   K VH  
Sbjct: 389 ALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGH 448

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
            +K GF     + +AL  MY+K G+L+   +VF    +KDV+SW ++I+G +++G  +EA
Sbjct: 449 TIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEA 508

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLV 479
           L+ F +M   G+ PD V   +I+SAC+    +E G     +     G     VD+   +V
Sbjct: 509 LELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDP-KVDHYACMV 567

Query: 480 LVYAKCGCINDANRVFDSMHT-RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD- 537
            + ++ G + +A    +S +    +  W  L+  C  +GK +  +   ++++A G++   
Sbjct: 568 DLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESS 627

Query: 538 -YITFVGLLFA 547
            Y+   G+  A
Sbjct: 628 TYVQLSGIYTA 638



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 203/376 (53%), Gaps = 9/376 (2%)

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           G  VHG I+ +G    +   + L++ YAKCG L  A  +       + VSWNS+I G+++
Sbjct: 33  GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92

Query: 314 QGFHKEA---LSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
            G    +   + LF++M A+DI  + +T   +    +S       +  H+L+VK    G 
Sbjct: 93  NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS---D 427
            +V+ +L+ MY K G ++    VF  M +++  +W+++++G A  G  EEA+K F+    
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLR 212

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
            +  G   D+ V +++LS+ A    +  G+Q+H + +K+G    +++ N+LV +Y+KC  
Sbjct: 213 EKEEGSDSDY-VFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCES 271

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           +N+A ++FDS   R+ ITW+A++ G +QNG+  EA++ + +M + G KP   T VG+L A
Sbjct: 272 LNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNA 331

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
           CS     E  +     + K+ G +        ++D+  ++G L +A+   D  + E D  
Sbjct: 332 CSDICYLEEGKQLHSFLLKL-GFERHLFATTALVDMYAKAGCLADARKGFD-CLQERDVA 389

Query: 608 VWKALLSACRVHGDLE 623
           +W +L+S    + D E
Sbjct: 390 LWTSLISGYVQNSDNE 405


>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
 gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 225/574 (39%), Positives = 342/574 (59%), Gaps = 8/574 (1%)

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL---EYSE 297
           IL AC  +      AQ+H  I+  GF+ N  V +      +    +  A  L+   E + 
Sbjct: 13  ILQACNTLPKL---AQLHTHIIKLGFQNNPLVLTKFTSASSNLDAIPYAMSLVFSVEDAR 69

Query: 298 IDNEVSWNSMIVGFARQGFHKE-ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
           + +   ++++I  +A     K  A+  +  M    I  + + +P VL   A   DLN  K
Sbjct: 70  VYDAFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGK 129

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAK-QGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           +VH  +VK GF+   FV N ++ MY    G ++ A  +F+ M   D ++WT++I G A  
Sbjct: 130 AVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARL 189

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G    A+  F  M+I+G+CPD V + S+LSAC +L  LE G+ + +   K     ++ + 
Sbjct: 190 GQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYIEKERVLKTVELS 249

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           N+LV ++AKCG ++ A  +F +M  R +++WT++I+G A +G+G EA+  +++M A G  
Sbjct: 250 NALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMV 309

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           P+ I F+GLL ACSH+GL E  R YF  M + +GI P  +HY CM+DLL R+G + EA  
Sbjct: 310 PEDIAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALE 369

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
            +++M  EP+  +W+ L+SACRVHG+L+LGE  +  L   EPM+   YV LSN+Y     
Sbjct: 370 FVERMPIEPNPIIWRTLISACRVHGELKLGESISKQLIRNEPMHESNYVLLSNIYGKMLD 429

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
           WE  +++R  M  +GI+K PG + +E ++++H FI  DR H    +I   ++E+   +K 
Sbjct: 430 WEKKSKIRVAMGKKGIQKVPGSTMIELDNEIHEFIVGDRSHNQYNEIIKMVNEMGREMKR 489

Query: 716 AGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
           AGY P       +++EE KE  L+ HSEKLA+AF LL  P G+PIRI KNLRVCGDCH+A
Sbjct: 490 AGYAPTTTEVFLDIDEEDKEDALSRHSEKLAIAFALLNTPPGSPIRITKNLRVCGDCHSA 549

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            K+IS +Y R I++RD +RFHHF+ G CSCGD+W
Sbjct: 550 SKFISKIYNREIVMRDRSRFHHFRDGQCSCGDFW 583



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 159/354 (44%), Gaps = 34/354 (9%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F ++T+I AYA S + +            N   + +L+ GY                 
Sbjct: 72  DAFLFSTIIRAYAESSQSKH-----------NAIFYYNLMLGY----------------- 103

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G  P++Y    VL+ C+    L  G+  HG  +K  FD + FV   +V MY  C    
Sbjct: 104 --GISPNKYAFPFVLKACAGLRDLNLGKAVHGSLVKFGFDDDIFVQNTMVHMYCCCSGGM 161

Query: 186 E-AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
           E A  LF   P   + V WT MI GY++ G    A+  FR M++ GV  +  T  S+L+A
Sbjct: 162 EFARKLFDEMPK-LDPVTWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLSA 220

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C  + A + G  +   I        V + +AL+DM+AKCGD+D A  L         VSW
Sbjct: 221 CTDLGALELGKWIESYIEKERVLKTVELSNALVDMFAKCGDVDKALGLFRNMSKRTIVSW 280

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIV 363
            S+IVG A  G   EA+SLF++M A  +  +D  +  +L+ C  S +     +    +  
Sbjct: 281 TSVIVGLAMHGRGLEAVSLFEEMKASGMVPEDIAFIGLLSACSHSGLVERGRQYFSEMTR 340

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHG 416
           + G          ++D+ ++ G +  A      M  + + I W +LI+ C  HG
Sbjct: 341 QFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWRTLISACRVHG 394



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 33/179 (18%)

Query: 38  DLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK 96
           +L+ ALVD F+  G++D+A  LF  MS R   +W ++I   A  GR              
Sbjct: 247 ELSNALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGR-------------- 292

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
                             +EA  LF +M+  G  P       +L  CS  GL++RG Q+ 
Sbjct: 293 -----------------GLEAVSLFEEMKASGMVPEDIAFIGLLSACSHSGLVERGRQYF 335

Query: 157 GYAIKTCFDLNAFVVTG-LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
               +    +      G +VD+ ++   + EA    +  P   N + W T+I+    +G
Sbjct: 336 SEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEFVERMPIEPNPIIWRTLISACRVHG 394


>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
          Length = 610

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 228/574 (39%), Positives = 348/574 (60%), Gaps = 3/574 (0%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           + + +T C    A   G QVH  ++++G+   +Y+ + L+ MYA+CG L+ A  +L+   
Sbjct: 38  YDAAITECVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMP 97

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASN-IDLNNA 355
             N VSW +MI G+++     EA  LF  M     + ++FT  SVL +C  S  I  +  
Sbjct: 98  ERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQI 157

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           K VH+  +K  FE + FV ++L+DMYA+  N+  A  VF+++  +DV+S+T++++G    
Sbjct: 158 KQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRL 217

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
           G  EEAL  F  +   G+  + V  S +L+A + L+ +++G+QVH + L+      +++ 
Sbjct: 218 GLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQ 277

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           NSL+ +Y+KCG +  + RVFD+M  R V++W A++MG  ++G   E +Q +  M  +  K
Sbjct: 278 NSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFMCDK-VK 336

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
           PD +T + +L   SH GL +     F+ + K         HY C+IDLLGRSG+L +A  
Sbjct: 337 PDSVTLLAVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLEKALL 396

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
           L+ +M  +P   +W +LL ACRVH ++ +GE  A  LF++EP NA  YV LSN+Y+ A  
Sbjct: 397 LIQKMPFQPTRAIWGSLLGACRVHANVHVGEFVAQKLFDIEPENAGNYVILSNIYAAARM 456

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
           W+D  R+RKLM  + + KEPG SW+  +  +H F S +R HP + DI  KI+EI   IK 
Sbjct: 457 WKDVFRLRKLMLKKTVIKEPGRSWMILDKVIHTFHSSERFHPRKEDINVKINEIYAAIKA 516

Query: 716 AGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
           AG+VPD++  LH+V++E KE  L  HSEKLA+ FGL++ P    I++ KNLR+C DCH  
Sbjct: 517 AGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNF 576

Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            K++S VY R I LRD NRFH    G C+CGDYW
Sbjct: 577 AKFVSKVYGREISLRDKNRFHLITEGACTCGDYW 610



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/385 (32%), Positives = 213/385 (55%), Gaps = 18/385 (4%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           ++  YA  G L +A  + +  P +N  +W+++I GYS      EA++LF  M   G  P+
Sbjct: 76  LVIMYARCGALEDAHNVLDGMPERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPN 135

Query: 133 QYTLDNVLRLCS-LKGLLQRG-EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           ++TL +VL  C+  +G+ Q   +Q H +AIK  F+L+ FV + L+DMYA+ + I EA  +
Sbjct: 136 EFTLASVLTSCTGSQGIHQHQIKQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRV 195

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F M P  ++ V++TT+++GY++ G   +A+  FR +  EG++ NQ TF  +L A + +S+
Sbjct: 196 FDMLP-ARDVVSYTTILSGYTRLGLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSS 254

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            D+G QVHG IL       + +Q++LIDMY+KCG L  +RR+ +     + VSWN+M++G
Sbjct: 255 MDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMG 314

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           + R G   E + LF+ M    +K D  T  +VL  ++    ++    +   IVK   E  
Sbjct: 315 YGRHGMAYEVVQLFRFM-CDKVKPDSVTLLAVLLGYSHGGLVDEGLDMFDHIVK---EQS 370

Query: 371 KFVNNA----LIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEALKYF 425
             +N      +ID+  + G L+ A ++   M  +   + W SL+  C  H +    +  F
Sbjct: 371 TLLNTQHYGCVIDLLGRSGQLEKALLLIQKMPFQPTRAIWGSLLGACRVHANVH--VGEF 428

Query: 426 SDMRISGICPD----HVVVSSILSA 446
              ++  I P+    +V++S+I +A
Sbjct: 429 VAQKLFDIEPENAGNYVILSNIYAA 453



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 168/310 (54%), Gaps = 4/310 (1%)

Query: 137 DNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD 196
           D  +  C  +  L+ G Q H   +   +    ++ T LV MYA+C  + +A  +    P+
Sbjct: 39  DAAITECVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMPE 98

Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA--RDFG 254
            +N V+WT MI+GYSQN    +A + F  M   G E N+FT  S+LT+C       +   
Sbjct: 99  -RNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQI 157

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
            QVH   +   FE +++V S+L+DMYA+  ++  ARR+ +     + VS+ +++ G+ R 
Sbjct: 158 KQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRL 217

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
           G  +EAL+LF++++   ++ +  T+  +LN  +    ++  K VH LI++     +  + 
Sbjct: 218 GLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQ 277

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           N+LIDMY+K G L  +  VF+ M ++ V+SW +++ G   HG   E ++ F  M    + 
Sbjct: 278 NSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFM-CDKVK 336

Query: 435 PDHVVVSSIL 444
           PD V + ++L
Sbjct: 337 PDSVTLLAVL 346



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 124/254 (48%), Gaps = 26/254 (10%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  ++++  YA S  ++EA+++F+  P ++  ++++++ GY+  GLD EA  LF Q+  E
Sbjct: 174 FVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLDEEALNLFRQLYNE 233

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G + +Q T   +L   S    +  G+Q HG  ++        +   L+DMY+KC  +  +
Sbjct: 234 GMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYS 293

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F   P+ ++ V+W  M+ GY ++G  ++ ++ FR M  + V+ +  T  ++L   + 
Sbjct: 294 RRVFDNMPE-RSVVSWNAMLMGYGRHGMAYEVVQLFRFM-CDKVKPDSVTLLAVLLGYS- 350

Query: 248 VSARDFGAQVHGCILSSG---FEANVYVQSAL---------IDMYAKCGDLDSARRLLEY 295
                     HG ++  G   F+  V  QS L         ID+  + G L+ A  L++ 
Sbjct: 351 ----------HGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLEKALLLIQK 400

Query: 296 SEID-NEVSWNSMI 308
                    W S++
Sbjct: 401 MPFQPTRAIWGSLL 414



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 9/121 (7%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN---ETP 94
           L  +L+D +S  G++  + ++F+ M +R   +WN M+  Y   G   E  +LF    +  
Sbjct: 276 LQNSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFMCDKV 335

Query: 95  FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ 154
             +  T  +++ GYS+ GL  E  ++F  +  E     Q TL N      +  LL R  Q
Sbjct: 336 KPDSVTLLAVLLGYSHGGLVDEGLDMFDHIVKE-----QSTLLNTQHYGCVIDLLGRSGQ 390

Query: 155 F 155
            
Sbjct: 391 L 391


>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 637

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 227/573 (39%), Positives = 342/573 (59%), Gaps = 1/573 (0%)

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           + S+L +C A  +   G Q+HG +L SG   +  + + L+D+YA CG +  ARRL +   
Sbjct: 65  YTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMP 124

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
             N   WN +I  +AR G H+ A+ L++ M    ++ D+FTYP  L   A+ +DL   + 
Sbjct: 125 KRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGRE 184

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           VH  ++ T +    FV   L+DMYAK G +D A  VF+ ++ +D + W S+I     +G 
Sbjct: 185 VHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGR 244

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
             EAL    DM  +G+ P    + S +SA A+   L  G+++H    + G      +  S
Sbjct: 245 PMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTS 304

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG-TKP 536
           LV +YAK G +  A  +F+ +  R++++W A+I G   +G   EAL+ +++M       P
Sbjct: 305 LVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTP 364

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           D ITFVG+L AC+H G+ + A+ +F  M  VY IKP   H+ C++D+LG +G+  EA  L
Sbjct: 365 DNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDL 424

Query: 597 LDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
           +  M  +PD+ +W ALL+ C++H ++ELGE A   L ELEP +A  YV LSN+Y+ +GKW
Sbjct: 425 IKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQSGKW 484

Query: 657 EDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA 716
           E AARVRKLM +RG++K  GCSW+E   + H F+  D  HP   +IY +++ +  L+ +A
Sbjct: 485 EKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELERLEGLMSDA 544

Query: 717 GYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAM 776
           GY+PD     H+V ++ K   +  HSE+LA+AFGL++ P G  + + KNLRVC DCH  +
Sbjct: 545 GYMPDTMPVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKNLRVCEDCHVVI 604

Query: 777 KYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           K IS +  R II+RD NR+HHF  G CSC DYW
Sbjct: 605 KLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 196/389 (50%), Gaps = 12/389 (3%)

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
           S +   +VL+ C     L  G Q HG  + +    +  + T LVD+YA C  +  A  LF
Sbjct: 61  SYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLF 120

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
              P  +N   W  +I  Y+++G    AI+ +R M   GVE + FT+P  L ACAA+   
Sbjct: 121 DGMPK-RNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDL 179

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
           + G +VH  +L + +  +++V + L+DMYAKCG +D AR + +   + + V WNSMI  +
Sbjct: 180 ETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAY 239

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
            + G   EALSL + M A  +     T  S ++  A    L   + +H    + GF+   
Sbjct: 240 GQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQD 299

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
            +  +L+DMYAK G +  A ++F  +  ++++SW ++I G   HG ++EALK F+ MR+ 
Sbjct: 300 KLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVE 359

Query: 432 G-ICPDHVVVSSILSACAELTVLE-----FGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             + PD++    +LSAC    +++     FG  V    +K     ++     LV V    
Sbjct: 360 AQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIK----PTVQHFTCLVDVLGHA 415

Query: 486 GCINDANRVFDSMHTR-DVITWTALIMGC 513
           G   +A  +   M  + D   W AL+ GC
Sbjct: 416 GRFEEAYDLIKGMPMQPDSGIWGALLNGC 444



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 173/368 (47%), Gaps = 6/368 (1%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G+L       D      ++  YA  G +  A++LF+  P +N F W+ LI  Y+  G   
Sbjct: 86  GRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPKRNVFLWNVLIRAYARDGPHE 145

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
            A +L+  M   G  P  +T    L+ C+    L+ G + H   + T +  + FV  GLV
Sbjct: 146 VAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTHWGEDMFVCAGLV 205

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMYAKC C+ +A  +F      ++ V W +MI  Y QNG   +A+   RDM   GV    
Sbjct: 206 DMYAKCGCVDDARAVFDRI-RVRDSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTI 264

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
            T  S ++A A  +A   G ++HG     GF+    ++++L+DMYAK G +  AR L E 
Sbjct: 265 ATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQ 324

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR-DIKIDDFTYPSVLNCFASNIDLNN 354
                 VSWN+MI G+   G   EAL LF KM     +  D+ T+  VL+       +  
Sbjct: 325 LMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKE 384

Query: 355 AKSVHSLIVKTGFEGYKFVNN--ALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITG 411
           AK    L+V   +     V +   L+D+    G  + A+ ++  +    D   W +L+ G
Sbjct: 385 AKEFFGLMVDV-YSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQPDSGIWGALLNG 443

Query: 412 CAYHGSYE 419
           C  H + E
Sbjct: 444 CKIHKNVE 451



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 143/331 (43%), Gaps = 27/331 (8%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F    ++  YA  G + +A+ +F+    ++   W+S+I  Y   G  +EA  L   M 
Sbjct: 197 DMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCRDMA 256

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G  P+  TL + +   +    L RG + HG+  +  FD    + T LVDMYAK   + 
Sbjct: 257 ANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQ 316

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTA 244
            A  LF+     +  V+W  MI GY  +G+  +A++ F  MRVE  V  +  TF  +L+A
Sbjct: 317 VARVLFEQLMK-RELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSA 375

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVY-----VQ--SALIDMYAKCGDLDSARRLLEYSE 297
           C      + G  V       G   +VY     VQ  + L+D+    G  + A  L++   
Sbjct: 376 C------NHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMP 429

Query: 298 IDNEVS-WNSMIVGFARQGFHKEA----LSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
           +  +   W +++ G      HK      L+L K +       D   Y  + N +A +   
Sbjct: 430 MQPDSGIWGALLNGCK---IHKNVELGELALQKLIELE--PEDAGNYVLLSNIYAQSGKW 484

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAK 383
             A  V  L+   G +  K +  + I++  K
Sbjct: 485 EKAARVRKLMTNRGLK--KIIGCSWIELKGK 513


>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 754

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 248/668 (37%), Positives = 375/668 (56%), Gaps = 19/668 (2%)

Query: 156 HGYAIKT-CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
           HG+ +KT C D N FV++ LV++YAKC  + +A  +F+  P  +N VAWTT++ G+ QN 
Sbjct: 87  HGHVMKTGCHD-NFFVMSFLVNVYAKCGNMEDARRVFENMPR-RNVVAWTTLMVGFVQNS 144

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQS 274
               AI  F++M   G   + +T  ++L AC+++ +   G Q H  I+    + +  V S
Sbjct: 145 QPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGS 204

Query: 275 ALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKI 334
           AL  +Y+KCG L+ A +        N +SW S +      G   + L LF +M + DIK 
Sbjct: 205 ALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKP 264

Query: 335 DDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVF 394
           ++FT  S L+       L     V SL +K G+E    V N+L+ +Y K G +  A   F
Sbjct: 265 NEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFF 324

Query: 395 NLMQDKDVISWTSLITGCAY-------------HGSYEEALKYFSDMRISGICPDHVVVS 441
           N M D  +++W ++I G A               GS  EALK FS +  SG+ PD   +S
Sbjct: 325 NRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGS--EALKIFSKLNQSGMKPDLFTLS 382

Query: 442 SILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR 501
           S+LS C+ +  +E G+Q+HA  +K+G  S + V  SL+ +Y KCG I  A++ F  M TR
Sbjct: 383 SVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMSTR 442

Query: 502 DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYF 561
            +I WT++I G +Q+G  ++AL  ++ M   G +P+ +TFVG+L ACSHAG+   A  YF
Sbjct: 443 TMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQALNYF 502

Query: 562 ESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGD 621
           E M K Y IKP  DHY CM+D+  R G+L +A   + +M  EP   +W   ++ CR HG+
Sbjct: 503 EIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRSHGN 562

Query: 622 LELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVE 681
           LELG  A+  L  L+P +   YV L NMY +A +++D +RVRK+M+   + K    SW+ 
Sbjct: 563 LELGFYASEQLLSLKPKDPETYVLLLNMYLSADRFDDVSRVRKMMEVEKVGKLKDWSWIS 622

Query: 682 TNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLA-Y 740
              +V+ F + D+ HP  + I   +++++   K  GY    +  + + EEE K      Y
Sbjct: 623 IKDKVYSFKTNDKTHPPSSLICKSLEDLLAKAKNLGYEMLESVEISDEEEEEKTSSPTIY 682

Query: 741 HSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKA 800
           HSEKLA+ FGL  LP  +PIR+ K+  +C D H  +K +S +  R II++DS R H F  
Sbjct: 683 HSEKLAITFGLENLPNSSPIRVVKSTLICRDSHNFIKCVSTLTGREIIVKDSKRLHKFVN 742

Query: 801 GNCSCGDY 808
           G CSCG++
Sbjct: 743 GECSCGNF 750



 Score =  228 bits (582), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 149/521 (28%), Positives = 255/521 (48%), Gaps = 17/521 (3%)

Query: 39  LNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF 98
           L + L   S SG     G + +     + F  + ++  YA  G + +A+++F   P +N 
Sbjct: 71  LQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMPRRNV 130

Query: 99  FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
             W++L+ G+        A  +F +M   G  PS YTL  VL  CS    L+ G+QFH Y
Sbjct: 131 VAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHAY 190

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFK 218
            IK   D +  V + L  +Y+KC  + +A   F    + KN ++WT+ ++    NG   K
Sbjct: 191 IIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIRE-KNVISWTSAVSACGDNGAPVK 249

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID 278
            +  F +M  E ++ N+FT  S L+ C  + + + G QV    +  G+E+N+ V+++L+ 
Sbjct: 250 GLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLY 309

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ-----------GFHKEALSLFKKM 327
           +Y K G +  A R     +  + V+WN+MI G A+                EAL +F K+
Sbjct: 310 LYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKL 369

Query: 328 HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL 387
           +   +K D FT  SVL+  +  + +   + +H+  +KTGF     V+ +LI MY K G++
Sbjct: 370 NQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSI 429

Query: 388 DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSAC 447
           + A   F  M  + +I+WTS+ITG + HG  ++AL  F DM ++G+ P+ V    +LSAC
Sbjct: 430 ERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSAC 489

Query: 448 AELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLVLVYAKCGCINDANRVFDSM-HTRDVI 504
           +   ++        +  K      + +D+   +V ++ + G +  A      M +     
Sbjct: 490 SHAGMVSQALNYFEIMQKKYKIKPV-MDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEF 548

Query: 505 TWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
            W+  I GC  +G  +      +Q+L+   K D  T+V LL
Sbjct: 549 IWSNFIAGCRSHGNLELGFYASEQLLSLKPK-DPETYVLLL 588


>gi|147820082|emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera]
          Length = 800

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 244/660 (36%), Positives = 375/660 (56%), Gaps = 32/660 (4%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           +T N +I+ YA  G +R A K+F+ET  ++  +W+++I G  N+G    A E    M+  
Sbjct: 35  YTANNIISGYAKCGEIRIASKMFDETSQRDAVSWNTMIAGXVNFGNFETALEFLKSMKRY 94

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G+    Y+  ++L+  +  G ++ G+Q H   +K  ++ N F  + L+DMYAKC+ + +A
Sbjct: 95  GFAVDGYSFGSILKGVACVGYVEVGQQVHSMIVKIGYEGNVFAGSALLDMYAKCERVEDA 154

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQ---NGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
             +FK   + +N V W  +I+GY+     G  F  ++C   M +EGVE +  TF  +LT 
Sbjct: 155 FEVFKSI-NIRNSVTWNALISGYAHVGDRGTAFWLLDC---MELEGVEIDDGTFAPLLTL 210

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS-EIDNEVS 303
                      QVH  I+  G  ++  V +A+I  Y++CG ++ A R+ + + E  + V+
Sbjct: 211 LDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVT 270

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
           WNSM+  +      +EA  LF +M     + D +TY SV++           KS+H L++
Sbjct: 271 WNSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIYTYTSVISAAFEXAHQGQGKSLHGLVI 330

Query: 364 KTGFEGYKFVNNALIDMYAKQ--GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           K G E    ++N+LI MY K    ++D A  +F  +++KD +SW S++TG +  G  E+A
Sbjct: 331 KRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDA 390

Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLV 481
           LK+F +MR   +  DH   S++L +C++L  L+ GQQVH +                   
Sbjct: 391 LKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVL------------------- 431

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
              CG I DA + FD+      I W +LI G AQ+G+GK AL  +  M  R  K D+ITF
Sbjct: 432 ---CGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITF 488

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
           V +L ACSH GL E    + +SM+  YGI P  +HYACMIDLLGR+G+L EAKAL++ M 
Sbjct: 489 VAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMP 548

Query: 602 GEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
            EPDA VWK LL ACR  GD+EL  + A++L ELEP     YV LS+M+    +W + A 
Sbjct: 549 FEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFGHLRRWNEKAS 608

Query: 662 VRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPD 721
           +++LMK RG++K PG SW+E  ++VH F +EDR HP   +IY ++ ++M  I+   YV +
Sbjct: 609 IKRLMKERGVKKVPGWSWIEVKNEVHSFNAEDRSHPNCEEIYLRLGDLMEEIRRLDYVAN 668



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 142/537 (26%), Positives = 249/537 (46%), Gaps = 68/537 (12%)

Query: 253 FGAQVHGCI-LSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
           + A V+ C+ + SG  A++Y  + +I  YAKCG++  A ++ + +   + VSWN+MI G 
Sbjct: 16  YRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFDETSQRDAVSWNTMIAGX 75

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
              G  + AL   K M      +D +++ S+L   A    +   + VHS+IVK G+EG  
Sbjct: 76  VNFGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMIVKIGYEGNV 135

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
           F  +AL+DMYAK   ++ AF VF  +  ++ ++W +LI+G A+ G    A      M + 
Sbjct: 136 FAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAHVGDRGTAFWLLDCMELE 195

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
           G+  D    + +L+   +  + +   QVHA  +K G  S  +V N+++  Y++CG I DA
Sbjct: 196 GVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDA 255

Query: 492 NRVFD-SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL---FA 547
            RVFD ++ TRD++TW +++     N + +EA + + +M   G +PD  T+  ++   F 
Sbjct: 256 ERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIYTYTSVISAAFE 315

Query: 548 CSHAG------------------------LAENARWYFESMDKVYGI---KPGPDHYACM 580
            +H G                        +A   + + +SMD+   I       DH +  
Sbjct: 316 XAHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWN 375

Query: 581 IDLLG--RSGKLIEAKALLDQMVGE---PDATVWKALLSACRVHGDLELGERA------- 628
             L G  +SG   +A    + M  +    D   + A+L +C     L+LG++        
Sbjct: 376 SILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLCGVI 435

Query: 629 --ANNLFELEPMN-AMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE--------PGC 677
             A   F+  P + ++ +  L   Y+  G+ + A  +  LMK R ++ +          C
Sbjct: 436 EDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTAC 495

Query: 678 SWVETNSQVHIFI---SEDRGHPLRTDIYS----------KIDEIMLLIKEAGYVPD 721
           S +    +   F+     D G P R + Y+          ++DE   LI+   + PD
Sbjct: 496 SHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPD 552



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 123/264 (46%), Gaps = 1/264 (0%)

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
           L  A   H L +K+G     +  N +I  YAK G +  A  +F+    +D +SW ++I G
Sbjct: 15  LYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFDETSQRDAVSWNTMIAG 74

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
               G++E AL++   M+  G   D     SIL   A +  +E GQQVH++ +K G   +
Sbjct: 75  XVNFGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMIVKIGYEGN 134

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
           +   ++L+ +YAKC  + DA  VF S++ R+ +TW ALI G A  G    A    D M  
Sbjct: 135 VFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAHVGDRGTAFWLLDCMEL 194

Query: 532 RGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLI 591
            G + D  TF  LL       L +        + K +G+         +I      G + 
Sbjct: 195 EGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVK-HGLASDTTVCNAIITAYSECGSIE 253

Query: 592 EAKALLDQMVGEPDATVWKALLSA 615
           +A+ + D  +   D   W ++L+A
Sbjct: 254 DAERVFDGAIETRDLVTWNSMLAA 277


>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 631

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 221/577 (38%), Positives = 347/577 (60%), Gaps = 1/577 (0%)

Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
           SN + + S+L +C +  A + G Q+H  +   G   N+ + + L++ Y+ C  L +A  L
Sbjct: 56  SNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHL 115

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
            +     N   WN +I  +A  G H+ A+SL+ +M    +K D+FT P VL   ++   +
Sbjct: 116 FDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTI 175

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
              + +H  ++++G+E   FV  AL+DMYAK G +  A  VF+ + D+D + W S++   
Sbjct: 176 GEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAY 235

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
           A +G  +E+L    +M   G+ P    + +++S+ A++  L  G+++H    + G   + 
Sbjct: 236 AQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYND 295

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
            V  +L+ +YAKCG +  A  +F+ +  + V++W A+I G A +G   EAL  +++M+ +
Sbjct: 296 KVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMM-K 354

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIE 592
             +PD+ITFVG L ACS   L +  R  +  M +   I P  +HY CM+DLLG  G+L E
Sbjct: 355 EAQPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDE 414

Query: 593 AKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYST 652
           A  L+ QM   PD+ VW ALL++C+ HG++EL E A   L ELEP ++  YV L+NMY+ 
Sbjct: 415 AYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANMYAQ 474

Query: 653 AGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLL 712
           +GKWE  AR+R+LM  +GI+K   CSW+E  ++V+ F+S D  HP    IY+++  +  L
Sbjct: 475 SGKWEGVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKRLEGL 534

Query: 713 IKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDC 772
           ++EAGYVPD     H+VEE+ K   +  HSE+LA+AFGL++   G  + I KNLR+C DC
Sbjct: 535 MREAGYVPDTGSVFHDVEEDEKTDMVCSHSERLAIAFGLISTLPGTRLLITKNLRICEDC 594

Query: 773 HTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           H A+K+IS +  R I +RD NR+HHF+ G CSCGDYW
Sbjct: 595 HVAIKFISKITEREITVRDVNRYHHFRHGLCSCGDYW 631



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 231/451 (51%), Gaps = 19/451 (4%)

Query: 76  AYANSGRLREAKKLFNETPFK-NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS-- 132
           ++++  + +E  ++ +   F  N F  S   + + ++     A +L  Q +++ +  S  
Sbjct: 2   SFSSIRKTQETSRILSILSFSLNLFPVSPYYFLHQSF-----ATQLIPQHKVDSFPSSPS 56

Query: 133 -QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
             Y   ++L  C     L+ G+Q H    +     N  + T LV+ Y+ C  +  A +LF
Sbjct: 57  NHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLF 116

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
              P G N   W  +I  Y+ NG    AI  +  M   G++ + FT P +L AC+A+S  
Sbjct: 117 DKIPKG-NLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTI 175

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
             G  +H  ++ SG+E +V+V +AL+DMYAKCG +  AR + +     + V WNSM+  +
Sbjct: 176 GEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAY 235

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
           A+ G   E+LSL  +M A+ ++  + T  +V++  A    L + + +H    + GF+   
Sbjct: 236 AQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYND 295

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
            V  ALIDMYAK G++  A ++F  +++K V+SW ++ITG A HG   EAL  F  M + 
Sbjct: 296 KVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERM-MK 354

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAKCGCIND 490
              PDH+     L+AC+   +L+ G+ ++ + ++    + ++     +V +   CG +++
Sbjct: 355 EAQPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDE 414

Query: 491 ANRVFDSMHTRDVI----TWTALIMGCAQNG 517
           A   +D +   DV+     W AL+  C  +G
Sbjct: 415 A---YDLIRQMDVMPDSGVWGALLNSCKTHG 442



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 122/405 (30%), Positives = 204/405 (50%), Gaps = 27/405 (6%)

Query: 35  PASDLNR----ALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAA-----YANSGRLRE 85
           P+S  N     +L++   S +  E G+       + G  +N  +A      Y+    LR 
Sbjct: 52  PSSPSNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRN 111

Query: 86  AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL 145
           A  LF++ P  N F W+ LI  Y+  G    A  L+ QM   G +P  +TL  VL+ CS 
Sbjct: 112 AHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSA 171

Query: 146 KGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTT 205
              +  G   H   I++ ++ + FV   LVDMYAKC C+ +A ++F    D ++ V W +
Sbjct: 172 LSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVD-RDAVLWNS 230

Query: 206 MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
           M+  Y+QNG+  +++    +M  +GV   + T  +++++ A ++    G ++HG     G
Sbjct: 231 MLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHG 290

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFK 325
           F+ N  V++ALIDMYAKCG +  A  L E       VSWN++I G+A  G   EAL LF+
Sbjct: 291 FQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFE 350

Query: 326 KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK-----TGFEGYKFVNNALIDM 380
           +M  ++ + D  T+   L   +    L+  +++++L+V+        E Y      ++D+
Sbjct: 351 RM-MKEAQPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHY----TCMVDL 405

Query: 381 YAKQGNLDCAFMVFNLMQDKDVIS----WTSLITGCAYHGSYEEA 421
               G LD A   ++L++  DV+     W +L+  C  HG+ E A
Sbjct: 406 LGHCGQLDEA---YDLIRQMDVMPDSGVWGALLNSCKTHGNVELA 447



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 148/321 (46%), Gaps = 6/321 (1%)

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
           F  Q F  + +   K         + + Y S+L    S   L   K +H+ + + G    
Sbjct: 33  FLHQSFATQLIPQHKVDSFPSSPSNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYN 92

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
             +   L++ Y+   +L  A  +F+ +   ++  W  LI   A++G +E A+  +  M  
Sbjct: 93  LDLATKLVNFYSVCNSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLE 152

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
            G+ PD+  +  +L AC+ L+ +  G+ +H   ++SG    + V  +LV +YAKCGC+ D
Sbjct: 153 YGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVD 212

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           A  VFD +  RD + W +++   AQNG   E+L    +M A+G +P   T V ++ + + 
Sbjct: 213 ARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSAD 272

Query: 551 AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
                + R         +G +        +ID+  + G +  A  L +++  E     W 
Sbjct: 273 IACLPHGR-EIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERL-REKRVVSWN 330

Query: 611 ALLSACRVHG----DLELGER 627
           A+++   +HG     L+L ER
Sbjct: 331 AIITGYAMHGLAVEALDLFER 351


>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
          Length = 852

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 234/657 (35%), Positives = 382/657 (58%), Gaps = 1/657 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D F  + +I  YAN G L +A+++F+    ++   W+ ++ GY   G    A ELF  
Sbjct: 178 DGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGD 237

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+  G  P+  TL   L + + +  L  G Q H  A+K   +    V   LV MYAKCKC
Sbjct: 238 MRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKC 297

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +   LF + P   + V W  MI+G  QNG+  +A+  F DM+  G+  +  T  S+L 
Sbjct: 298 LDDGWKLFGLMPR-DDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLP 356

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           A   ++  + G ++HG I+ +    +V++ SAL+D+Y KC  +  A+ + + S+  + V 
Sbjct: 357 ALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVI 416

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
            ++MI G+   G  +EA+ +F+ +  + I+ +     SVL   AS   +   + +HS  +
Sbjct: 417 GSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYAL 476

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K  +EG  +V +AL+DMYAK G LD +  +F+ +  KD ++W S+I+  A +G  EEAL 
Sbjct: 477 KNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALN 536

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            F +M + G+   +V +SS+LSACA L  + +G+++H V +K    + L  +++L+ +Y 
Sbjct: 537 LFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYG 596

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG +  A+RVF+SM  ++ ++W ++I      G  KE++     M   G K D++TF+ 
Sbjct: 597 KCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLA 656

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           L+ AC+HAG  +     F  M + Y I P  +H+ACM+DL  R+GKL +A  L+  M  +
Sbjct: 657 LVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFK 716

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
           PDA +W ALL ACRVH ++EL E A+  LF+L+P N+  YV +SN+ + AG+W+  ++VR
Sbjct: 717 PDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVR 776

Query: 664 KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
           +LMK   ++K PG SWV+ N+  H+F++ D+ HP   DIY  +  I+L ++E GY+P
Sbjct: 777 RLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLKSILLELREEGYIP 833



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 164/570 (28%), Positives = 268/570 (47%), Gaps = 78/570 (13%)

Query: 20  IGPARYTHNVGNSVKPASDL--NRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAA 76
           I   R  H    ++    D+    AL+  ++N G + +A Q+F+ M++RD   WN M+  
Sbjct: 162 IALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDG 221

Query: 77  YANSGRLREAKKLFNETPF----KNFFTW----------SSLIYGYS------NYGLDIE 116
           Y  +G +  A +LF +        NF T           S L +G         YGL+ E
Sbjct: 222 YVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESE 281

Query: 117 -------------------AFELF----------WQMQLEG------------------- 128
                               ++LF          W   + G                   
Sbjct: 282 VAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQK 341

Query: 129 --YRPSQYTLDNVLR-LCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
              RP   TL ++L  L  L G  Q G++ HGY ++ C  ++ F+V+ LVD+Y KC+ + 
Sbjct: 342 SGIRPDSVTLVSLLPALTDLNGFNQ-GKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVR 400

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A+ ++       + V  +TMI+GY  NG   +A++ FR +  +G+  N     S+L AC
Sbjct: 401 MAQSVYDS-SKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPAC 459

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A+++A   G ++H   L + +E   YV+SAL+DMYAKCG LD +  +       +EV+WN
Sbjct: 460 ASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWN 519

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           SMI  FA+ G  +EAL+LF++M    +K  + T  SVL+  AS   +   K +H +++K 
Sbjct: 520 SMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKG 579

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
                 F  +ALIDMY K GNL+ A  VF  M +K+ +SW S+I     +G  +E++   
Sbjct: 580 PIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLL 639

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAK 484
             M+  G   DHV   +++SACA    ++ G ++     +    +  +     +V +Y++
Sbjct: 640 RHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSR 699

Query: 485 CGCINDANRVFDSMHTR-DVITWTALIMGC 513
            G ++ A  +   M  + D   W AL+  C
Sbjct: 700 AGKLDKAMELIVDMPFKPDAGIWGALLHAC 729



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 149/522 (28%), Positives = 250/522 (47%), Gaps = 15/522 (2%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFD-LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           VLR C     L  G Q HG A+       +  + T LV MY   +   +A  +F   P G
Sbjct: 45  VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104

Query: 198 KNHVA--WTTMITGYSQNGYGFKAIECFRDM--RVEGVESNQFTFPSILTACAAVSARDF 253
               A  W  +I G +  G    A+  +  M         +  TFP ++ +CAA+ A   
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIAL 164

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           G  VH    + G + +++V SALI MYA  G L  AR++ +     + V WN M+ G+ +
Sbjct: 165 GRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVK 224

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
            G    A+ LF  M A   + +  T    L+  A+  DL     +H+L VK G E    V
Sbjct: 225 AGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAV 284

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
            N L+ MYAK   LD  + +F LM   D+++W  +I+GC  +G  ++AL  F DM+ SGI
Sbjct: 285 ANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGI 344

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
            PD V + S+L A  +L     G+++H   +++     + + ++LV +Y KC  +  A  
Sbjct: 345 RPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQS 404

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC-SHAG 552
           V+DS    DV+  + +I G   NG  +EA++ +  +L +G +P+ +    +L AC S A 
Sbjct: 405 VYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAA 464

Query: 553 LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
           +      +  ++   Y  +   +  + ++D+  + G+L  +  +  + +   D   W ++
Sbjct: 465 MKLGQELHSYALKNAYEGRCYVE--SALMDMYAKCGRLDLSHYIFSK-ISAKDEVTWNSM 521

Query: 613 LSACRVHGDLELGERAANNLFELEPMNAMPY--VQLSNMYST 652
           +S+   +G+ E     A NLF    M  + Y  V +S++ S 
Sbjct: 522 ISSFAQNGEPE----EALNLFREMCMEGVKYSNVTISSVLSA 559



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 210/404 (51%), Gaps = 32/404 (7%)

Query: 32  SVKPA-SDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF 90
           S+ PA +DLN     F+   E+   G +       D F  + ++  Y     +R A+ ++
Sbjct: 353 SLLPALTDLN----GFNQGKELH--GYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVY 406

Query: 91  NETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQ 150
           + +   +    S++I GY   G+  EA ++F  +  +G RP+   + +VL  C+    ++
Sbjct: 407 DSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMK 466

Query: 151 RGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
            G++ H YA+K  ++   +V + L+DMYAKC  +  + Y+F      K+ V W +MI+ +
Sbjct: 467 LGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKI-SAKDEVTWNSMISSF 525

Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV 270
           +QNG   +A+  FR+M +EGV+ +  T  S+L+ACA++ A  +G ++HG ++     A++
Sbjct: 526 AQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADL 585

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
           + +SALIDMY KCG+L+ A R+ E     NEVSWNS+I  +   G  KE++SL + M   
Sbjct: 586 FAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEE 645

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN------------ALI 378
             K D  T+ ++++  A           H+  V+ G   ++ +               ++
Sbjct: 646 GFKADHVTFLALVSACA-----------HAGQVQEGLRLFRCMTEEYQIAPRMEHFACMV 694

Query: 379 DMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           D+Y++ G LD A  ++ ++    D   W +L+  C  H + E A
Sbjct: 695 DLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELA 738


>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 229/637 (35%), Positives = 372/637 (58%), Gaps = 6/637 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFN--ETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG 128
            ++I  Y +    + AK +F   E P  +   W+ L+   +   + IE  E+F ++    
Sbjct: 42  KSLINLYFSCHLFQSAKLVFQTIENPL-DITLWNGLMAACTKNFIFIEGLEVFHRLLHFP 100

Query: 129 Y-RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           Y +P  +T  +VL+ CS  G +  G+  H + IK+ F ++  V++  V MYAKC    +A
Sbjct: 101 YLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDA 160

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             LF   P+ ++  +W  +I+ Y Q+G   KA+E F +M+V G + +  T  +++++CA 
Sbjct: 161 IKLFDEMPE-RDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCAR 219

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           +   + G ++H  ++ SGF  + +V SAL+DMY KCG L+ A+ + E  +  N VSWNSM
Sbjct: 220 LLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSM 279

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I G++ +G  K  + LF++M    I+    T  S+L   + +++L   K +H  I++   
Sbjct: 280 IAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRV 339

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
           E   FVN++LID+Y K GN+  A  VF  M   +V+SW  +I+G    GSY EAL  F+D
Sbjct: 340 EADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTD 399

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           MR +G+ PD +  +S+L AC++L VLE G+++H   ++S    +  V  +L+ +YAKCG 
Sbjct: 400 MRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGA 459

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           +++A  +F+ +  RD ++WT++I     +G+  EAL+ +++M     KPD +TF+ +L A
Sbjct: 460 VDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSA 519

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG-EPDA 606
           CSHAGL +   +YF  M   YG KP  +HY+C+IDLLGR G+L EA  +L +      D 
Sbjct: 520 CSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDV 579

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
            +   L SAC +H  L+LGE+    L E +P +   Y+ LSNMY++  KW++  +VR  +
Sbjct: 580 GLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKI 639

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIY 703
           K  G++K PGCSW+E   ++H F+ ED+ HP    IY
Sbjct: 640 KELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIY 676



 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 144/391 (36%), Positives = 218/391 (55%), Gaps = 1/391 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D    ++ +  YA      +A KLF+E P ++  +W+++I  Y   G   +A ELF +M+
Sbjct: 140 DVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMK 199

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           + G++P   TL  V+  C+    L+RG++ H   +++ F L+ FV + LVDMY KC C+ 
Sbjct: 200 VSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLE 259

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A+ +F+     KN V+W +MI GYS  G     IE FR M  EG+     T  SIL AC
Sbjct: 260 MAKEVFEQI-QRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMAC 318

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           +       G  +HG I+ +  EA+++V S+LID+Y KCG++ SA  + +     N VSWN
Sbjct: 319 SRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWN 378

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
            MI G+ + G + EAL +F  M    +K D  T+ SVL   +    L   K +H+ I+++
Sbjct: 379 VMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIES 438

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
             E  + V  AL+DMYAK G +D A  +FN + ++D +SWTS+I     HG   EALK F
Sbjct: 439 KLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLF 498

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFG 456
             M+ S   PD V   +ILSAC+   +++ G
Sbjct: 499 EKMQQSDAKPDKVTFLAILSACSHAGLVDEG 529



 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 145/490 (29%), Positives = 253/490 (51%), Gaps = 11/490 (2%)

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
           L ++L+ C     L++G+  H   +      N  +   L+++Y  C     A+ +F+   
Sbjct: 6   LLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIE 65

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECF-RDMRVEGVESNQFTFPSILTACAAVSARDFG 254
           +  +   W  ++   ++N    + +E F R +    ++ + FT+PS+L AC+ +    +G
Sbjct: 66  NPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYG 125

Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
             VH  ++ SGF  +V V S+ + MYAKC   + A +L +     +  SWN++I  + + 
Sbjct: 126 KMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQD 185

Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
           G  ++AL LF++M     K D  T  +V++  A  +DL   K +H  +V++GF    FV+
Sbjct: 186 GQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVS 245

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
           +AL+DMY K G L+ A  VF  +Q K+V+SW S+I G +  G  +  ++ F  M   GI 
Sbjct: 246 SALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIR 305

Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
           P    +SSIL AC+    L+ G+ +H   +++   + + V++SL+ +Y KCG I  A  V
Sbjct: 306 PTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENV 365

Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
           F +M   +V++W  +I G  + G   EAL  +  M   G KPD ITF  +L ACS   + 
Sbjct: 366 FQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVL 425

Query: 555 ENAR----WYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
           E  +    +  ES  ++  +  G      ++D+  + G + EA  + +Q+  E D   W 
Sbjct: 426 EKGKEIHNFIIESKLEINEVVMG-----ALLDMYAKCGAVDEALHIFNQL-PERDFVSWT 479

Query: 611 ALLSACRVHG 620
           ++++A   HG
Sbjct: 480 SMIAAYGSHG 489



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 162/318 (50%), Gaps = 9/318 (2%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G +     + D F  +++I  Y   G +  A+ +F   P  N  +W+ +I GY   G  +
Sbjct: 332 GYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYL 391

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           EA  +F  M+  G +P   T  +VL  CS   +L++G++ H + I++  ++N  V+  L+
Sbjct: 392 EALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALL 451

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
           DMYAKC  + EA ++F   P+ ++ V+WT+MI  Y  +G  F+A++ F  M+    + ++
Sbjct: 452 DMYAKCGAVDEALHIFNQLPE-RDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDK 510

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLE 294
            TF +IL+AC+     D G      +++  GF+  V   S LID+  + G L  A  +L+
Sbjct: 511 VTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQ 570

Query: 295 YS-EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKI---DDFTYPSVLNCFASNI 350
            + +I  +V   S +  F+    HK+ L L +++    I+    D  TY  + N +AS  
Sbjct: 571 RTPDIREDVGLLSTL--FSACHLHKK-LDLGEQIGRLLIEKDPDDPSTYIILSNMYASVK 627

Query: 351 DLNNAKSVHSLIVKTGFE 368
             +  + V   I + G +
Sbjct: 628 KWDEVRKVRLKIKELGLK 645



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 10/99 (10%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE------TP 94
           AL+D ++  G +DEA  +F ++ +RD  +W +MIAAY + G+  EA KLF +       P
Sbjct: 449 ALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKP 508

Query: 95  FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPS 132
            K   T+ +++   S+ GL  E    F QM  E G++P+
Sbjct: 509 DK--VTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPA 545


>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1005

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 235/688 (34%), Positives = 392/688 (56%), Gaps = 4/688 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFK-NFFTWSSLIYGYSNYGLDIEAFELFW 122
           +  GF  N +++ YA +  L  AK+LF+ +  K +   W+S++  YS  G  +E  +LF 
Sbjct: 194 NSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAVLWNSILSSYSTSGKSLETLQLFR 253

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           +MQ+ G   + YT+ + L  C      + G++ H   +K+      +V   L+ MYA+C 
Sbjct: 254 EMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLKSTHSFEVYVCNALIAMYARCG 313

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            + EA  + ++  +  + V W ++I GY QN    +A++ F DM   G + ++ +  S++
Sbjct: 314 KMLEAGRILRLM-NNADVVTWNSLIKGYVQNLMYKEALQFFCDMIAAGHKPDEVSLTSVI 372

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
            A   +S    G ++H  ++  G+++N+ V + LIDMY+KC       R        + +
Sbjct: 373 AASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLTCYMGRAFLMMHEKDLI 432

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SW ++I G+A    H EAL LF+ +  + ++ID+    S+L   +    +   K +H  I
Sbjct: 433 SWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACSVLKSMLIVKEIHCHI 492

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
           ++ G      + N L+D+Y K  N+  A  VF  ++ KDV+SWTS+I+  A +G+  EA+
Sbjct: 493 LRKGLID-TVIQNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNGNENEAV 551

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
           + F  M  +G+  D V +  ILSA A L+ L+ G+++H   L+ G C   S+  ++V +Y
Sbjct: 552 ELFRRMAETGLLADSVALLCILSAAASLSALKKGREIHGYLLRKGFCLEGSIAVAVVDMY 611

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
           A CG +  A  VFD +  + ++ +T++I     +G GK +++ +++M      PD+I+F+
Sbjct: 612 ACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKASVELFNKMRHENVSPDHISFL 671

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
            LL+ACSHAGL +  R + + M+  Y ++P P+HY C++D+LGR+  ++EA   +  M  
Sbjct: 672 ALLYACSHAGLLDEGRRFLKIMELEYKLEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKT 731

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
           EP   VW ALL+ACR H + E+GE AA  L ELEP N    V +SN+++  G+W D  +V
Sbjct: 732 EPTTEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKV 791

Query: 663 RKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIML-LIKEAGYVPD 721
           R  MK+ G+ K PGCSW+E + +VH F + D+ HP   +IY K+ E+   L +E+GY+ D
Sbjct: 792 RAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPETKEIYEKLSEVTRKLERESGYLAD 851

Query: 722 MNFALHNVEEEGKEIGLAYHSEKLAVAF 749
             F LHNV+E  K   L  HSE+LA+A+
Sbjct: 852 TKFILHNVDEGEKVQMLHGHSERLAIAY 879



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 211/717 (29%), Positives = 344/717 (47%), Gaps = 72/717 (10%)

Query: 2   FKLDFKILNFSLRCRSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEK 61
           F+L   I      CR K+    +   ++G  V+  S  N A  D    G ++EA   F++
Sbjct: 37  FRLHCSIPTELSSCRPKL-SRIQTNPSIGKPVQVPSP-NLASFD----GGLNEA---FQR 87

Query: 62  MSDRDGFTWNTMIAAYA------NSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           + D +G   N+ I AYA         R    +K+F+E   +  F W++LI  Y + G   
Sbjct: 88  L-DVNGN--NSPIEAYAYLLELCGKSRALSQEKVFDEMRDRTAFAWNALIGAYVSNGEPA 144

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
            A  ++  M++EG     Y+   +L+ C     ++ G + H   +K  F+   F+V  LV
Sbjct: 145 SALFIYRNMRVEGVPLDLYSFPVLLKACGKLRDIRSGTELHCMLVKLGFNSTGFIVNALV 204

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
            MYAK   +  A+ LF    +  + V W ++++ YS +G   + ++ FR+M++ G  SN 
Sbjct: 205 SMYAKTDHLSAAKRLFDASQEKGDAVLWNSILSSYSTSGKSLETLQLFREMQMTGPASNS 264

Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
           +T  S LTAC   S    G ++H  +L S     VYV +ALI MYA+CG +  A R+L  
Sbjct: 265 YTIVSALTACEGFSYAKLGKEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRL 324

Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
               + V+WNS+I G+ +   +KEAL  F  M A   K D+ +  SV+       +L   
Sbjct: 325 MNNADVVTWNSLIKGYVQNLMYKEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAG 384

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAY 414
             +H+ ++K G++    V N LIDMY+K  NL C     F +M +KD+ISWT++I G A 
Sbjct: 385 MELHAYVIKHGWDSNLLVGNTLIDMYSK-CNLTCYMGRAFLMMHEKDLISWTTIIAGYAL 443

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
           +  + EAL+ F D+    +  D +++ SIL AC+ L  +   +++H   L+ G   ++ +
Sbjct: 444 NDCHVEALQLFRDVAKKRMEIDEMMLGSILRACSVLKSMLIVKEIHCHILRKGLIDTV-I 502

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
            N LV VY KC  +  A+RVF+S+  +DV++WT++I   A NG   EA++ + +M   G 
Sbjct: 503 QNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNGNENEAVELFRRMAETGL 562

Query: 535 KPDYITFVGL-------------------------------------LFACSHAGLAENA 557
             D +  + +                                     ++AC   G  ++A
Sbjct: 563 LADSVALLCILSAAASLSALKKGREIHGYLLRKGFCLEGSIAVAVVDMYAC--CGDLQSA 620

Query: 558 RWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE---PDATVWKALLS 614
           +  F+ ++     + G   Y  MI+  G  G    +  L ++M  E   PD   + ALL 
Sbjct: 621 KAVFDRIE-----RKGLLQYTSMINAYGMHGCGKASVELFNKMRHENVSPDHISFLALLY 675

Query: 615 ACRVHGDLELGERAANNL---FELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           AC   G L+ G R    +   ++LEP     YV L +M   A    +A    K+MK+
Sbjct: 676 ACSHAGLLDEGRRFLKIMELEYKLEPWPEH-YVCLVDMLGRANCVVEAFEFVKMMKT 731


>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
          Length = 673

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 252/668 (37%), Positives = 366/668 (54%), Gaps = 49/668 (7%)

Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC----IFEAEYLFKMFPDGKNHVAWT 204
           L   +Q H   ++T    ++++   LV  YA         FE+      F    N   W 
Sbjct: 48  LHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWN 107

Query: 205 TMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS 264
            MI    +N   FKAI  + +M V     N++T+P++L AC+       G QVH  ++  
Sbjct: 108 CMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKH 167

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLE--YSEIDNEVSWNSMIVGFARQGFHKEALS 322
           G   + ++ S+ I MYA  G L  ARR+L+    E+D  V WN+MI G+ R G  + A  
Sbjct: 168 GLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVD-AVCWNAMIDGYLRFGEVEAARE 226

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYA 382
           LF+ M  R          S+++ +                            NA+I  ++
Sbjct: 227 LFEGMPDR----------SMISTW----------------------------NAMISGFS 248

Query: 383 KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
           + G ++ A   F+ M+++D ISW+++I G    G + EAL+ F  M+   I P   V+ S
Sbjct: 249 RCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPS 308

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
           +LSACA L  L+ G+ +H    ++       +  SLV +YAKCG I+ A  VF+ M  ++
Sbjct: 309 VLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKE 368

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
           V +W A+I G A +G+ ++A+  + +M      P+ ITFVG+L AC+H GL +     F 
Sbjct: 369 VSSWNAMIGGLAMHGRAEDAIDLFSKM---DIYPNEITFVGVLNACAHGGLVQKGLTIFN 425

Query: 563 SMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDL 622
           SM K YG++P  +HY C++DLLGR+G L EA+ ++  +  EP   VW ALL ACR HG++
Sbjct: 426 SMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNV 485

Query: 623 ELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVET 682
           ELGER    L ELEP N+  Y  LSN+Y+ AG+WE+   VRKLMK RGI+  PG S ++ 
Sbjct: 486 ELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDL 545

Query: 683 -NSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYH 741
              +VH FI  D  HP   DIY  +D++   ++  GY PD +  L +++EE KE  +  H
Sbjct: 546 GRGEVHKFIIGDGSHPQVKDIYQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQH 605

Query: 742 SEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAG 801
           SEKLA+ FGL+    G  IRI KNLRVC DCH+A K IS VY R II+RD  R+HHF+ G
Sbjct: 606 SEKLAIGFGLINTSPGTTIRIVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNG 665

Query: 802 NCSCGDYW 809
            CSC D+W
Sbjct: 666 ACSCKDFW 673



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 115/460 (25%), Positives = 210/460 (45%), Gaps = 48/460 (10%)

Query: 65  RDGFTWNTMIAAYANSGRLR-----EAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFE 119
           +D +   +++ +YAN    R      + ++F+     N F W+ +I          +A  
Sbjct: 65  QDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAIL 124

Query: 120 LFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYA 179
           L+++M +   RP++YT   VL+ CS  G++  G Q H + +K     +  +++  + MYA
Sbjct: 125 LYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYA 184

Query: 180 KCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFP 239
               + EA  +        + V W  MI GY +    F  +E  R++  EG+        
Sbjct: 185 SFGRLVEARRILDDKGGEVDAVCWNAMIDGYLR----FGEVEAAREL-FEGMPDRSM--- 236

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
                                         +   +A+I  +++CG ++ AR   +  +  
Sbjct: 237 ------------------------------ISTWNAMISGFSRCGMVEVAREFFDEMKER 266

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           +E+SW++MI G+ ++G   EAL +F +M    I+   F  PSVL+  A+   L+  + +H
Sbjct: 267 DEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIH 326

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
           +   +   +    +  +L+DMYAK G +D A+ VF  M +K+V SW ++I G A HG  E
Sbjct: 327 TYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAE 386

Query: 420 EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSL 478
           +A+  FS M    I P+ +    +L+ACA   +++ G  +     K  G    +     +
Sbjct: 387 DAIDLFSKM---DIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCI 443

Query: 479 VLVYAKCGCINDANRVFDSMHTRDV-ITWTALIMGCAQNG 517
           V +  + G + +A +V  S+ T      W AL+  C ++G
Sbjct: 444 VDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHG 483



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/280 (31%), Positives = 141/280 (50%), Gaps = 12/280 (4%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGF-TWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           A++D +   GE++ A +LFE M DR    TWN MI+ ++  G +  A++ F+E   ++  
Sbjct: 210 AMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEI 269

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           +WS++I GY   G  +EA E+F QMQ E  RP ++ L +VL  C+  G L +G   H YA
Sbjct: 270 SWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYA 329

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
            +    L+  + T LVDMYAKC  I  A  +F+   + K   +W  MI G + +G    A
Sbjct: 330 KRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSN-KEVSSWNAMIGGLAMHGRAEDA 388

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALID 278
           I+ F  M    +  N+ TF  +L ACA       G  +   +    G E  +     ++D
Sbjct: 389 IDLFSKM---DIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVD 445

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVS---WNSMIVGFARQG 315
           +  + G L  A +++  S I  E +   W +++    + G
Sbjct: 446 LLGRAGLLTEAEKVV--SSIPTEPTPAVWGALLGACRKHG 483



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 12/226 (5%)

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC-----INDANRVFDSMHTRDVIT 505
           T L   +Q HA+ L++G      +  SLV  YA            + RVFD +   +V  
Sbjct: 46  TSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFL 105

Query: 506 WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMD 565
           W  +I  C +N +  +A+  Y +M+   ++P+  T+  +L ACS +G+          + 
Sbjct: 106 WNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLV 165

Query: 566 KVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELG 625
           K +G+       +  I +    G+L+EA+ +LD   GE DA  W A++      G++E  
Sbjct: 166 K-HGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVE-- 222

Query: 626 ERAANNLFELEPMNAM--PYVQLSNMYSTAGKWEDAARVRKLMKSR 669
             AA  LFE  P  +M   +  + + +S  G  E A      MK R
Sbjct: 223 --AARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKER 266



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 68/133 (51%), Gaps = 3/133 (2%)

Query: 25  YTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRL 83
           +T+   NS++    L  +LVD ++  G ID A ++FEKMS+++  +WN MI   A  GR 
Sbjct: 326 HTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRA 385

Query: 84  REAKKLFNETP-FKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLR 141
            +A  LF++   + N  T+  ++   ++ GL  +   +F  M+ E G  P       ++ 
Sbjct: 386 EDAIDLFSKMDIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVD 445

Query: 142 LCSLKGLLQRGEQ 154
           L    GLL   E+
Sbjct: 446 LLGRAGLLTEAEK 458


>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 244/733 (33%), Positives = 384/733 (52%), Gaps = 85/733 (11%)

Query: 72  TMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRP 131
           +++  +   GR+  A++ F E  FK+ F W+ ++ GY++ G   +A +    M+L G +P
Sbjct: 230 SILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKP 289

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
            Q T + ++   +  G  +   ++               + GL D              F
Sbjct: 290 DQVTWNAIISGYAQSGQFEEASKYF------------LEMGGLKD--------------F 323

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
           K      N V+WT +I G  QNGY F+A+  FR M +EGV+ N  T  S ++AC  +S  
Sbjct: 324 K-----PNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLL 378

Query: 252 DFGAQVHG-CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
             G ++HG CI     ++++ V ++L+D YAKC  ++ ARR     +  + VSWN+M+ G
Sbjct: 379 RHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAG 438

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID------------------- 351
           +A +G H+EA+ L  +M  + I+ D  T+  ++  F    D                   
Sbjct: 439 YALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPN 498

Query: 352 ----------------LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
                           L   K +H  +++   E    V +ALI MY+   +L+ A  VF+
Sbjct: 499 TTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFS 558

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
            +  +DV+ W S+I+ CA  G    AL    +M +S +  + V + S L AC++L  L  
Sbjct: 559 ELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQ 618

Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
           G+++H   ++ G  +   + NSL+ +Y +CG I  + R+FD M  RD+++W  +I     
Sbjct: 619 GKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGM 678

Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
           +G G +A+  +      G KP++ITF  LL ACSH+GL E    YF+ M   Y + P  +
Sbjct: 679 HGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVE 738

Query: 576 HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
            YACM+DLL R+G+  E    +++M  EP+A VW +LL ACR+H + +L E AA  LFEL
Sbjct: 739 QYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFEL 798

Query: 636 EPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG 695
           EP ++  YV ++N+YS AG+WEDAA++R LMK RG+ K PGCSW+E   ++H F+  D  
Sbjct: 799 EPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTS 858

Query: 696 HPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLP 755
           HPL   I  K  ++                  +V+E+ KE  L  HSEK+A+AFGL++  
Sbjct: 859 HPLMEQISGKDGKL------------------DVDEDEKEFSLCGHSEKIALAFGLISTT 900

Query: 756 QGAPIRIFKNLRV 768
            G P+RI KNLRV
Sbjct: 901 XGTPLRIIKNLRV 913



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 162/650 (24%), Positives = 297/650 (45%), Gaps = 94/650 (14%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  + ++  Y  +G + +A+++F++   +N F+W++++  Y   G   E  +LF+ M  E
Sbjct: 125 FLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNE 184

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G RP  +    V + CS     + G+  + Y +   F+ N+ V   ++DM+ KC  +  A
Sbjct: 185 GVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIA 244

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
              F+   + K+   W  M++GY+  G   KA++C  DM++ GV+ +Q T+         
Sbjct: 245 RRFFEEI-EFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTW--------- 294

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR-LLEYSEID----NEV 302
                                     +A+I  YA+ G  + A +  LE   +     N V
Sbjct: 295 --------------------------NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVV 328

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SW ++I G  + G+  EALS+F+KM    +K +  T  S ++   +   L + + +H   
Sbjct: 329 SWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYC 388

Query: 363 VKT-GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           +K    +    V N+L+D YAK  +++ A   F +++  D++SW +++ G A  GS+EEA
Sbjct: 389 IKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEA 448

Query: 422 LKYFSDMRISGICPDHV-----------------------------------VVSSILSA 446
           ++  S+M+  GI PD +                                    +S  L+A
Sbjct: 449 IELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAA 508

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITW 506
           C ++  L+ G+++H   L++    S  V ++L+ +Y+ C  +  A  VF  + TRDV+ W
Sbjct: 509 CGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVW 568

Query: 507 TALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDK 566
            ++I  CAQ+G+   AL    +M     + + +T V  L ACS        +   +    
Sbjct: 569 NSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQ---- 624

Query: 567 VYGIKPGPDH----YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDL 622
            + I+ G D        +ID+ GR G + +++ + D M  + D   W  ++S   +HG  
Sbjct: 625 -FIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLM-PQRDLVSWNVMISVYGMHG-- 680

Query: 623 ELGERAANNLFELEPMNAMP-YVQLSNMYST---AGKWEDAARVRKLMKS 668
             G  A N       M   P ++  +N+ S    +G  E+  +  K+MK+
Sbjct: 681 -FGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKT 729



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 150/542 (27%), Positives = 244/542 (45%), Gaps = 83/542 (15%)

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           ++L+ C     L+ G Q H   +    D+  F+ + L+++Y +  C+ +A  +F    + 
Sbjct: 94  SILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE- 152

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           +N  +WT ++  Y   G   + I+ F  M  EGV  + F FP +  AC+ +     G  V
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 212

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
           +  +LS GFE N  V+ +++DM+ KCG +D ARR  E  E  +   WN M+ G+  +G  
Sbjct: 213 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF 272

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
           K+AL     M    +K D  T+                                   NA+
Sbjct: 273 KKALKCISDMKLSGVKPDQVTW-----------------------------------NAI 297

Query: 378 IDMYAKQGNLDCA---FMVFNLMQD--KDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
           I  YA+ G  + A   F+    ++D   +V+SWT+LI G   +G   EAL  F  M + G
Sbjct: 298 ISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEG 357

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC-SSLSVDNSLVLVYAKCGCINDA 491
           + P+ + ++S +SAC  L++L  G+++H   +K     S L V NSLV  YAKC  +  A
Sbjct: 358 VKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVA 417

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
            R F  +   D+++W A++ G A  G  +EA++   +M  +G +PD IT+ GL+   +  
Sbjct: 418 RRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQY 477

Query: 552 GLAENARWYFESMDKVYGIKPGPDHYACMIDLLG-----RSGKLIEAKALLDQM-----V 601
           G  + A  +F+ M  + G+ P     +  +   G     + GK I    L + +     V
Sbjct: 478 GDGKAALEFFQRMHSM-GMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGV 536

Query: 602 GEP------------------------DATVWKALLSACRVHGDLELGERAANNLFELEP 637
           G                          D  VW +++SAC   G      R+ N L  L  
Sbjct: 537 GSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSG------RSVNALDLLRE 590

Query: 638 MN 639
           MN
Sbjct: 591 MN 592



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 188/423 (44%), Gaps = 37/423 (8%)

Query: 207 ITGYS------QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
           ITG+S      +NG    A      M +   +     + SIL  C  +     G QVH  
Sbjct: 55  ITGFSGGGSVHRNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQ 114

Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEA 320
           ++ +G +   ++ S L+++Y + G ++ ARR+ +     N  SW +++  +   G ++E 
Sbjct: 115 LVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEET 174

Query: 321 LSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDM 380
           + LF  M    ++ D F +P V    +   +    K V+  ++  GFEG   V  +++DM
Sbjct: 175 IKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDM 234

Query: 381 YAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVV 440
           + K G +D A   F  ++ KDV  W  +++G    G +++ALK  SDM++SG+ PD V  
Sbjct: 235 FIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTW 294

Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT 500
           ++I+S  A+    E   +    FL+ GG                                
Sbjct: 295 NAIISGYAQSGQFE---EASKYFLEMGGLKDFK--------------------------- 324

Query: 501 RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWY 560
            +V++WTALI G  QNG   EAL  + +M+  G KP+ IT    + AC++  L  + R  
Sbjct: 325 PNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREI 384

Query: 561 FESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
                KV  +         ++D   +  + +E       M+ + D   W A+L+   + G
Sbjct: 385 HGYCIKVEELDSDLLVGNSLVDYYAKC-RSVEVARRKFGMIKQTDLVSWNAMLAGYALRG 443

Query: 621 DLE 623
             E
Sbjct: 444 SHE 446



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 118/240 (49%), Gaps = 3/240 (1%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           + +I+ Y+    L  A  +F+E   ++   W+S+I   +  G  + A +L  +M L    
Sbjct: 538 SALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVE 597

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
            +  T+ + L  CS    L++G++ H + I+   D   F++  L+DMY +C  I ++  +
Sbjct: 598 VNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRI 657

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F + P  ++ V+W  MI+ Y  +G+G  A+  F+  R  G++ N  TF ++L+AC+    
Sbjct: 658 FDLMPQ-RDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGL 716

Query: 251 RDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
            + G +    + +    +  V   + ++D+ ++ G  +     +E    + N   W S++
Sbjct: 717 IEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLL 776



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 126/255 (49%), Gaps = 17/255 (6%)

Query: 415 HGSYEEALKYFSDMRISGICPDHVV--VSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
           +G    A    S M ++   PD  +   +SIL  C +L  L  G QVHA  + +G     
Sbjct: 67  NGVLNNAAMLLSSMDLTN--PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCE 124

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
            + + L+ VY + GC+ DA R+FD M  R+V +WTA++      G  +E ++ +  M+  
Sbjct: 125 FLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNE 184

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC----MIDLLGRSG 588
           G +PD+  F  +  ACS     +N R   +  D  Y +  G +  +C    ++D+  + G
Sbjct: 185 GVRPDHFVFPKVFKACSE---LKNYRVGKDVYD--YMLSIGFEGNSCVKGSILDMFIKCG 239

Query: 589 KLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANN--LFELEPMNAMPYVQL 646
           ++  A+   ++ +   D  +W  ++S     G+ +   +  ++  L  ++P + + +  +
Sbjct: 240 RMDIARRFFEE-IEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKP-DQVTWNAI 297

Query: 647 SNMYSTAGKWEDAAR 661
            + Y+ +G++E+A++
Sbjct: 298 ISGYAQSGQFEEASK 312



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 72/146 (49%), Gaps = 3/146 (2%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D   F  N++I  Y   G +++++++F+  P ++  +W+ +I  Y  +G  ++A  LF  
Sbjct: 632 DTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQX 691

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV--VTGLVDMYAKC 181
            +  G +P+  T  N+L  CS  GL++ G ++    +KT + ++  V     +VD+ ++ 
Sbjct: 692 FRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKM-MKTEYAMDPAVEQYACMVDLLSRA 750

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMI 207
               E     +  P   N   W +++
Sbjct: 751 GQFNETLEFIEKMPFEPNAAVWGSLL 776


>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
 gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
          Length = 673

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 251/667 (37%), Positives = 372/667 (55%), Gaps = 16/667 (2%)

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGY 215
           H + IKT      FV++ LV++YAKC  +  A  +F   P  +N V WTT++TGY QN  
Sbjct: 3   HAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPR-RNVVVWTTLMTGYVQNSQ 61

Query: 216 GFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSA 275
              A+E F DM   G   + FT    L AC+++ +   G Q H  I+      +  + +A
Sbjct: 62  PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           L  +Y+K G LDS+ +    +   + +SW ++I      G     L LF +M   +++ +
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPN 181

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
           DFT  SVL+  ++    +    VHSL  K G E    + N+L+ +Y K G +D A  +FN
Sbjct: 182 DFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFN 241

Query: 396 LMQDKDVISWTSLITGCAY-----------HGSYEEALKYFSDMRISGICPDHVVVSSIL 444
            M+ K++I+W ++I G A              +  EAL  +  +  SG  PD   +SSIL
Sbjct: 242 RMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSIL 301

Query: 445 SACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVI 504
           + C+ L  LE G+Q+HA  +KSG  S + V  +LV +Y KCG I  A + F  M TR +I
Sbjct: 302 TVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLI 361

Query: 505 TWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESM 564
           +WT++I   A++G+ + ALQ ++ M   G +P+ ITFVG+L ACSHAG+ + A  YFE M
Sbjct: 362 SWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIM 421

Query: 565 DKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLEL 624
            K Y IKP  DHY C++D+  R G+L EA  ++ +M  EP+  +W  L++ CR HG+ EL
Sbjct: 422 QKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEEL 481

Query: 625 GERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNS 684
           G  AA  L +L+P +   YV L NMY +A +WED + VR+LMK   + K    S +    
Sbjct: 482 GFYAAEQLLKLKPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDWSRISIKG 541

Query: 685 QVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHN---VEEEGKEIGLA-Y 740
           +VH F + +R H    ++++ +++++   K  GY    N  + +    E E K    A Y
Sbjct: 542 EVHSFKTNNRLHNHNAELHTLLNDLVDRAKSLGYEQLENMEVIDDEEEEAEEKAFSSAVY 601

Query: 741 HSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKA 800
           HSEKLAV FGLL  P GAPIR+ K++ +C DCH  MK +S+   RHII++D  R H F  
Sbjct: 602 HSEKLAVTFGLLNTPIGAPIRVIKSVTMCKDCHDFMKVVSSQTTRHIIIKDGKRLHKFVN 661

Query: 801 GNCSCGD 807
           G CSC D
Sbjct: 662 GQCSCAD 668



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 154/503 (30%), Positives = 244/503 (48%), Gaps = 39/503 (7%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  + ++  YA  G +  A+K+F+  P +N   W++L+ GY        A E+F  M   
Sbjct: 16  FVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQPEVAVEVFGDMLES 75

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G  PS +TL   L  CS    +  G+QFH + IK     ++ +   L  +Y+K   +  +
Sbjct: 76  GSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSS 135

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
              F+   + K+ ++WTT+I+    NG     +  F +M  E VE N FT  S+L+ C+ 
Sbjct: 136 VKAFRETGE-KDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCST 194

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
           + + D G QVH      G E+N+ + ++L+ +Y KCG +D A+ L    E  N ++WN+M
Sbjct: 195 IQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAM 254

Query: 308 IVG-----------FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
           I G           F+ Q    EAL ++ K++    K D FT  S+L   +    L   +
Sbjct: 255 IAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGE 314

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H+  +K+GF     V  AL+DMY K G+++ A   F  M  + +ISWTS+IT  A HG
Sbjct: 315 QIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHG 374

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAE-------LTVLEFGQQVHAV--FLKSG 467
             + AL+ F DMR++G  P+ +    +L+AC+        L   E  Q+ + +   +   
Sbjct: 375 QSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIMQKEYKIKPVMDHY 434

Query: 468 GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDV----ITWTALIMGCAQNGKGKEAL 523
           GC        LV ++ + G +++A   FD +   DV      W  LI GC  +  G E L
Sbjct: 435 GC--------LVDMFVRLGRLDEA---FDVIKRMDVEPNEFIWLLLIAGCRNH--GNEEL 481

Query: 524 QFYDQMLARGTKPDYI-TFVGLL 545
            FY        KP    T+V LL
Sbjct: 482 GFYAAEQLLKLKPRSTETYVVLL 504



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 212/436 (48%), Gaps = 40/436 (9%)

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           VH  ++ +G     +V S L+++YAKCG + +AR++ +     N V W +++ G+ +   
Sbjct: 2   VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61

Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
            + A+ +F  M        +FT    LN  +S   +   K  H+ I+K        + NA
Sbjct: 62  PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121

Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
           L  +Y+K G+LD +   F    +KDVISWT++I+ C  +G     L+ F +M    + P+
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPN 181

Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFD 496
              ++S+LS C+ +   + G QVH++  K G  S+L + NSLV +Y KCGCI++A  +F+
Sbjct: 182 DFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFN 241

Query: 497 SMHTRDVITWTALIMGCAQ-----------NGKGKEALQFYDQMLARGTKPDYITFVGLL 545
            M  +++ITW A+I G AQ              G EAL  Y ++   G KPD  T   +L
Sbjct: 242 RMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSIL 301

Query: 546 FACSH-AGLAENARWYFESM------DKVYGIKPGPDHYACMIDLLGRSGKLIEA-KALL 597
             CS  A L +  + + +++      D V G          ++D+  + G +  A KA L
Sbjct: 302 TVCSRLAALEQGEQIHAQTIKSGFLSDVVVG--------TALVDMYDKCGSIERARKAFL 353

Query: 598 DQMVGEPDATVWKALLSACRVHGDLELGERAANNLFE------LEPMNAMPYVQLSNMYS 651
           D  +       W +++++   HG      + A  LFE        P N + +V +    S
Sbjct: 354 D--MSTRTLISWTSMITSFARHGQ----SQHALQLFEDMRLAGFRP-NQITFVGVLAACS 406

Query: 652 TAGKWEDAARVRKLMK 667
            AG  ++A    ++M+
Sbjct: 407 HAGMVDEALEYFEIMQ 422



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/378 (30%), Positives = 175/378 (46%), Gaps = 36/378 (9%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D    N + + Y+  G L  + K F ET  K+  +W+++I    + G       LF +M 
Sbjct: 115 DSSIGNALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEML 174

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            E   P+ +TL +VL LCS       G Q H  + K   + N  +   LV +Y KC CI 
Sbjct: 175 FENVEPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCID 234

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQ-----------NGYGFKAIECFRDMRVEGVESN 234
           EA+ LF    + KN + W  MI G++Q              G +A+  +  +   G + +
Sbjct: 235 EAKNLFNRM-EYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPD 293

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
            FT  SILT C+ ++A + G Q+H   + SGF ++V V +AL+DMY KCG ++ AR+   
Sbjct: 294 LFTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFL 353

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
                  +SW SMI  FAR G  + AL LF+ M     + +  T+  VL           
Sbjct: 354 DMSTRTLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVL----------- 402

Query: 355 AKSVHSLIVKTGFEGYKFVNN------------ALIDMYAKQGNLDCAFMVFNLMQ-DKD 401
           A   H+ +V    E ++ +               L+DM+ + G LD AF V   M  + +
Sbjct: 403 AACSHAGMVDEALEYFEIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPN 462

Query: 402 VISWTSLITGCAYHGSYE 419
              W  LI GC  HG+ E
Sbjct: 463 EFIWLLLIAGCRNHGNEE 480



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 141/303 (46%), Gaps = 28/303 (9%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS 109
           G IDEA  LF +M  ++  TWN MIA +A +  L +                      +S
Sbjct: 231 GCIDEAKNLFNRMEYKNLITWNAMIAGHAQAMDLAKD--------------------NFS 270

Query: 110 NYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAF 169
                 EA  ++ ++   G +P  +TL ++L +CS    L++GEQ H   IK+ F  +  
Sbjct: 271 AQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVV 330

Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
           V T LVDMY KC  I  A   F +    +  ++WT+MIT ++++G    A++ F DMR+ 
Sbjct: 331 VGTALVDMYDKCGSIERARKAF-LDMSTRTLISWTSMITSFARHGQSQHALQLFEDMRLA 389

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ--SALIDMYAKCGDLD 287
           G   NQ TF  +L AC+     D   +    I+   ++    +     L+DM+ + G LD
Sbjct: 390 GFRPNQITFVGVLAACSHAGMVDEALEYFE-IMQKEYKIKPVMDHYGCLVDMFVRLGRLD 448

Query: 288 SARRLLEYSEID-NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF-TYPSVLNC 345
            A  +++  +++ NE  W  +I G    G   E L  +       +K     TY  +LN 
Sbjct: 449 EAFDVIKRMDVEPNEFIWLLLIAGCRNHG--NEELGFYAAEQLLKLKPRSTETYVVLLNM 506

Query: 346 FAS 348
           + S
Sbjct: 507 YIS 509



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 79/201 (39%), Gaps = 44/201 (21%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           ALVD +   G I+ A + F  MS R   +W +MI ++A  G+ + A +LF +        
Sbjct: 334 ALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHALQLFED-------- 385

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF----- 155
                                  M+L G+RP+Q T   VL  CS  G++    ++     
Sbjct: 386 -----------------------MRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIMQ 422

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG- 214
             Y IK   D        LVDM+ +   + EA  + K      N   W  +I G   +G 
Sbjct: 423 KEYKIKPVMDHYG----CLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGN 478

Query: 215 --YGFKAIECFRDMRVEGVES 233
              GF A E    ++    E+
Sbjct: 479 EELGFYAAEQLLKLKPRSTET 499


>gi|302773067|ref|XP_002969951.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
 gi|300162462|gb|EFJ29075.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
          Length = 789

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 261/749 (34%), Positives = 400/749 (53%), Gaps = 14/749 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N ++  YA     R+A+ L +  P +N  +W+++I   +  G    +   F +M  +
Sbjct: 48  FLSNHLLHMYARLESSRDAELLLDRMPRRNAVSWNAVIRANAQAGDFPRSLLFFQRMLQD 107

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G  P        L L    G +Q GE    +A K+ FD +  V T L+ MY +C  +  A
Sbjct: 108 GSVPDAVVF---LSLIKAPGTIQEGEIVQDFAKKSGFDRSFVVGTALIGMYGRCGRLDRA 164

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
           +  F    + +  V+W  +IT YS+     +++  FR+M ++G+  N  T   I +A A 
Sbjct: 165 KDAFDRIQE-RGVVSWNALITVYSRGDEKEQSLRVFREMLLQGIAPNAVTIICIASAVAG 223

Query: 248 VSAR--DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           ++A+    G  +H C + SG  +   V +++I+++ + G++  A  + E  +  +  SWN
Sbjct: 224 IAAKITTCGNLIHACSIDSGLISVTTVANSIINLFGRGGNISRANEIFEKVDQRDVCSWN 283

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +MI  FA+ G   EAL L+ +M    I+ D  T+ +VL       DL   +S+H      
Sbjct: 284 TMIAAFAKNGHVFEALDLYGRM---TIRPDGVTFVNVLEACDCPDDLERGESIHRDARAH 340

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G++    V  AL+ MY + G LD A  VF  +Q   VI+  ++I   A  G  + +L +F
Sbjct: 341 GYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPGVITLNAIIAAHAQFGRADGSLLHF 400

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFG-QQVHAVFLK-SGGCS--SLSVDNSLVLV 481
             M   GI P    + ++L ACA         + +H    +  G C    + V N+LV +
Sbjct: 401 RQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRWMAECPGDCDPHDILVRNALVNM 460

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           YAKCG ++ A  +FD+    +V TW A++ G AQ+G    A++   +M   G  PD I+F
Sbjct: 461 YAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYADMAVRLLYEMQLAGISPDPISF 520

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
              L A SHA   E+    F ++ + YG+ P  +HY  ++DLLGR+G L EA+  L  M 
Sbjct: 521 TAALSASSHARQVEDGARIFYAISRDYGLIPSVEHYGAVVDLLGRAGWLEEAEGFLRSMA 580

Query: 602 GEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
              DA  W ALL ACR+H D +   RAA  +  ++P +   Y  LSN+YS AG+W++A  
Sbjct: 581 IAADAAAWMALLGACRIHKDQDRAMRAAEAIVAIDPSHGASYTVLSNVYSAAGRWDEAEE 640

Query: 662 VRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIK-EAGYVP 720
           +R+ M   G RKEPG SW+E  ++VH F  +DR HP   +IY ++DE+ +++K E  YVP
Sbjct: 641 IRRRMGENGARKEPGRSWIEVKNRVHEFAVKDRSHPRTGEIYERLDELRVVLKSEEDYVP 700

Query: 721 DMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYIS 780
           D+   LH+VE+E +E  L +HSEKLA+ FGL+   +G+ I I KNLR+C DCH  MK  S
Sbjct: 701 DVGSVLHDVEDEHRENLLWHHSEKLALGFGLIGTKEGSKITIIKNLRICEDCHVVMKLTS 760

Query: 781 AVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
               R I++RD  RFHHF  G CSC D W
Sbjct: 761 KNTKREIVVRDCYRFHHFNGGACSCSDCW 789



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 148/546 (27%), Positives = 255/546 (46%), Gaps = 44/546 (8%)

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           ++ RL      L +G + H   I++ +  + F+   L+ MYA+ +   +AE L    P  
Sbjct: 17  DLARLVDESTSLDQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPR- 75

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           +N V+W  +I   +Q G   +++  F+ M  +G   +   F S++ A   +     G  V
Sbjct: 76  RNAVSWNAVIRANAQAGDFPRSLLFFQRMLQDGSVPDAVVFLSLIKAPGTIQE---GEIV 132

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
                 SGF+ +  V +ALI MY +CG LD A+   +  +    VSWN++I  ++R    
Sbjct: 133 QDFAKKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEK 192

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS------VHSLIVKTGFEGYK 371
           +++L +F++M  + I  +  T    + C AS +    AK       +H+  + +G     
Sbjct: 193 EQSLRVFREMLLQGIAPNAVT----IICIASAVAGIAAKITTCGNLIHACSIDSGLISVT 248

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
            V N++I+++ + GN+  A  +F  +  +DV SW ++I   A +G   EAL  +  M I 
Sbjct: 249 TVANSIINLFGRGGNISRANEIFEKVDQRDVCSWNTMIAAFAKNGHVFEALDLYGRMTIR 308

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
              PD V   ++L AC     LE G+ +H      G  S L V  +LV +Y +CG ++ A
Sbjct: 309 ---PDGVTFVNVLEACDCPDDLERGESIHRDARAHGYDSDLIVATALVSMYRRCGRLDRA 365

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
             VF ++    VIT  A+I   AQ G+   +L  + QML  G +P   T V +L AC+ +
Sbjct: 366 AEVFAAIQHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATS 425

Query: 552 GLAENA-----RWYFESMDKVYGIKPG---PDHYA---CMIDLLGRSGKLIEAKALLDQM 600
           G A +A     RW  E         PG   P        ++++  + G L  A+ + D  
Sbjct: 426 GAAASAGRDLHRWMAEC--------PGDCDPHDILVRNALVNMYAKCGDLDAARGIFDA- 476

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP----YVQLSNMYSTAGKW 656
             + + + W A+++    HG  ++  R    L+E++     P    +    +  S A + 
Sbjct: 477 APQGNVSTWNAIMAGYAQHGYADMAVRL---LYEMQLAGISPDPISFTAALSASSHARQV 533

Query: 657 EDAARV 662
           ED AR+
Sbjct: 534 EDGARI 539



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/463 (24%), Positives = 224/463 (48%), Gaps = 21/463 (4%)

Query: 50  GEIDEAGQLFEKMSDRDGF-----TWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSL 104
           G I E G++ +  + + GF         +I  Y   GRL  AK  F+    +   +W++L
Sbjct: 124 GTIQE-GEIVQDFAKKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNAL 182

Query: 105 IYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQR----GEQFHGYAI 160
           I  YS      ++  +F +M L+G  P+  T+  +    ++ G+  +    G   H  +I
Sbjct: 183 ITVYSRGDEKEQSLRVFREMLLQGIAPNAVTI--ICIASAVAGIAAKITTCGNLIHACSI 240

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAI 220
            +       V   +++++ +   I  A  +F+   D ++  +W TMI  +++NG+ F+A+
Sbjct: 241 DSGLISVTTVANSIINLFGRGGNISRANEIFEKV-DQRDVCSWNTMIAAFAKNGHVFEAL 299

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
           + +  M    +  +  TF ++L AC      + G  +H    + G+++++ V +AL+ MY
Sbjct: 300 DLYGRM---TIRPDGVTFVNVLEACDCPDDLERGESIHRDARAHGYDSDLIVATALVSMY 356

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
            +CG LD A  +    +    ++ N++I   A+ G    +L  F++M    I+   FT  
Sbjct: 357 RRCGRLDRAAEVFAAIQHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLV 416

Query: 341 SVL-NCFASNIDLNNAKSVHSLIVKTGFEGYK---FVNNALIDMYAKQGNLDCAFMVFNL 396
           +VL  C  S    +  + +H  + +   +       V NAL++MYAK G+LD A  +F+ 
Sbjct: 417 AVLGACATSGAAASAGRDLHRWMAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDA 476

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
               +V +W +++ G A HG  + A++   +M+++GI PD +  ++ LSA +    +E G
Sbjct: 477 APQGNVSTWNAIMAGYAQHGYADMAVRLLYEMQLAGISPDPISFTAALSASSHARQVEDG 536

Query: 457 QQV-HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
            ++ +A+    G   S+    ++V +  + G + +A     SM
Sbjct: 537 ARIFYAISRDYGLIPSVEHYGAVVDLLGRAGWLEEAEGFLRSM 579



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 177/411 (43%), Gaps = 53/411 (12%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           F   G I  A ++FEK+  RD  +WNTMIAA+A +G +                      
Sbjct: 258 FGRGGNISRANEIFEKVDQRDVCSWNTMIAAFAKNGHV---------------------- 295

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
                     EA +L+ +M +   RP   T  NVL  C     L+RGE  H  A    +D
Sbjct: 296 ---------FEALDLYGRMTI---RPDGVTFVNVLEACDCPDDLERGESIHRDARAHGYD 343

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            +  V T LV MY +C  +  A  +F         +    +I  ++Q G    ++  FR 
Sbjct: 344 SDLIVATALVSMYRRCGRLDRAAEVFAAIQH-PGVITLNAIIAAHAQFGRADGSLLHFRQ 402

Query: 226 MRVEGVESNQFTFPSIL-----TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
           M   G+  ++FT  ++L     +  AA + RD    +  C        ++ V++AL++MY
Sbjct: 403 MLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRWMAECPGDCD-PHDILVRNALVNMY 461

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
           AKCGDLD+AR + + +   N  +WN+++ G+A+ G+   A+ L  +M    I  D  ++ 
Sbjct: 462 AKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYADMAVRLLYEMQLAGISPDPISFT 521

Query: 341 SVLNCFASNIDLNNAKSVHSLIVK-----TGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
           + L+  +    + +   +   I +        E Y     A++D+  + G L+ A     
Sbjct: 522 AALSASSHARQVEDGARIFYAISRDYGLIPSVEHY----GAVVDLLGRAGWLEEAEGFLR 577

Query: 396 LMQDKDVISWTSLITG-CAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
            M      +    + G C  H   + A++  +   I  I P H    ++LS
Sbjct: 578 SMAIAADAAAWMALLGACRIHKDQDRAMR--AAEAIVAIDPSHGASYTVLS 626



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 8/188 (4%)

Query: 430 ISGICPDHVVVSS---ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
           IS + P    V S   +     E T L+ G+++H   ++SG    L + N L+ +YA+  
Sbjct: 2   ISSVLPPAAPVDSWRDLARLVDESTSLDQGRKIHRRVIESGYGDHLFLSNHLLHMYARLE 61

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
              DA  + D M  R+ ++W A+I   AQ G    +L F+ +ML  G+ PD + F+ L+ 
Sbjct: 62  SSRDAELLLDRMPRRNAVSWNAVIRANAQAGDFPRSLLFFQRMLQDGSVPDAVVFLSLIK 121

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           A       E      +   K  G          +I + GR G+L  AK   D+ + E   
Sbjct: 122 APGTIQEGE----IVQDFAKKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDR-IQERGV 176

Query: 607 TVWKALLS 614
             W AL++
Sbjct: 177 VSWNALIT 184


>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Vitis vinifera]
          Length = 647

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 234/607 (38%), Positives = 357/607 (58%), Gaps = 40/607 (6%)

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG-DLDSARRLL-EYSE 297
           S+L  C  ++      QVH  I   G E   +V + L+    K    +D   RL+ +  E
Sbjct: 44  SVLHGCTHINQVK---QVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVE 100

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
             N   W ++I G+A QG   E++ L+  M  + I    FT+ ++L   ++ +D+N  + 
Sbjct: 101 YPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQ 160

Query: 358 VHS-LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI------- 409
           VH+  I+  GF    +V N LIDMY K G L C   VF+ M D+DVISWTSLI       
Sbjct: 161 VHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVG 220

Query: 410 ------------------------TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
                                   TG A +    EAL+ F  M+ +G+  D V +  ++S
Sbjct: 221 NMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVIS 280

Query: 446 ACAELTVLEFGQQVHAVFLKSG--GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDV 503
           ACA+L   ++   V  V  +SG    S++ V ++L+ +YAKCG + DA +VF+ M  R+V
Sbjct: 281 ACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNV 340

Query: 504 ITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFES 563
            +++++I+G A +G    A++ +D+ML    KP+ +TF+G+L ACSHAG+ E  +  F  
Sbjct: 341 YSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAM 400

Query: 564 MDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
           M++ +G+ P  DHYACM+DLLGR+G+L EA  L+  M   P   VW ALL ACR+HG+ +
Sbjct: 401 MEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPD 460

Query: 624 LGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETN 683
           + + AA++LFELEP     Y+ LSN+Y++AG+W+D ++VRKLM+++G++K PGCSWVE  
Sbjct: 461 MAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGK 520

Query: 684 SQ-VHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHS 742
              +H F + D  HP   +I   +++++  +K  GY P+++   +++ +E K+  L  HS
Sbjct: 521 KGIIHEFFAGDMSHPKSREIKQALEDLLDRLKYLGYQPNLSSVAYDISDEEKKRLLMSHS 580

Query: 743 EKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGN 802
           EKLA+AFGLLT   G  IRI KNLR+C DCH+ M   S +  R I++RD+ RFHHF+ G 
Sbjct: 581 EKLALAFGLLTTNAGCTIRIVKNLRICEDCHSVMCGASQITGREIVVRDNMRFHHFRDGR 640

Query: 803 CSCGDYW 809
           CSCG++W
Sbjct: 641 CSCGNFW 647



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 179/371 (48%), Gaps = 37/371 (9%)

Query: 87  KKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLK 146
           + +F +  + N F W++LI GY+  G  +E+  L+  M+ +G  P  +T   +L+ CS  
Sbjct: 93  RLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAA 152

Query: 147 GLLQRGEQFHGYAIKT-CFDLNAFVVTGLVDMYAKCKC------IFE------------- 186
             +  G Q H   I    F  + +V   L+DMY KC C      +F+             
Sbjct: 153 LDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSL 212

Query: 187 ------------AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
                       A  LF   P  K+ VAWT M+TGY+QN    +A+E F  M+  GV+++
Sbjct: 213 IVAYAKVGNMEAASELFDGLPM-KDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTD 271

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGF--EANVYVQSALIDMYAKCGDLDSARRL 292
           + T   +++ACA + A  +   V      SGF   +NV V SALIDMYAKCG ++ A ++
Sbjct: 272 EVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKV 331

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
            E  E  N  S++SMIVGFA  G    A+ LF +M   +IK +  T+  VL   +    +
Sbjct: 332 FERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMV 391

Query: 353 NNAKSVHSLIVKT-GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM-QDKDVISWTSLIT 410
              + + +++ +  G    +     ++D+  + G L+ A  +  +M  +     W +L+ 
Sbjct: 392 EQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLG 451

Query: 411 GCAYHGSYEEA 421
            C  HG+ + A
Sbjct: 452 ACRIHGNPDMA 462



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 196/404 (48%), Gaps = 41/404 (10%)

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA--EYLFKMFPDGKNHVAWTTMITGY 210
           +Q H +  +   +   FV+  L+    K     +     +F+   +  N   WT +I GY
Sbjct: 56  KQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQV-EYPNPFLWTALIRGY 114

Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG-CILSSGFEAN 269
           +  G   +++  +  MR +G+    FTF ++L AC+A    + G QVH   IL  GF ++
Sbjct: 115 ALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSD 174

Query: 270 VYVQSALIDMYAKCGDLDSARRLLE----------------YSEIDNE------------ 301
           +YV + LIDMY KCG L    R+ +                Y+++ N             
Sbjct: 175 LYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLPM 234

Query: 302 ---VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
              V+W +M+ G+A+    +EAL +F++M A  +K D+ T   V++  A       A  V
Sbjct: 235 KDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWV 294

Query: 359 HSLIVKTGFEGYK--FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
             +  ++GF       V +ALIDMYAK G+++ A+ VF  M++++V S++S+I G A HG
Sbjct: 295 RDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHG 354

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
               A++ F +M  + I P+ V    +L+AC+   ++E GQQ+ A+  +  G +  S D+
Sbjct: 355 LAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAP-SEDH 413

Query: 477 --SLVLVYAKCGCINDANRVFDSMHTRD-VITWTALIMGCAQNG 517
              +V +  + G + +A  +   M        W AL+  C  +G
Sbjct: 414 YACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHG 457



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 128/241 (53%), Gaps = 4/241 (1%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
           ++F++M DRD  +W ++I AYA  G +  A +LF+  P K+   W++++ GY+      E
Sbjct: 196 RVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPRE 255

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG--L 174
           A E+F +MQ  G +  + TL  V+  C+  G  +        A ++ F   + VV G  L
Sbjct: 256 ALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSAL 315

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           +DMYAKC  + +A  +F+   + +N  ++++MI G++ +G    A+E F +M    ++ N
Sbjct: 316 IDMYAKCGSVEDAYKVFERMEE-RNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPN 374

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILS-SGFEANVYVQSALIDMYAKCGDLDSARRLL 293
           + TF  +LTAC+     + G Q+   +    G   +    + ++D+  + G L+ A  L+
Sbjct: 375 RVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLV 434

Query: 294 E 294
           +
Sbjct: 435 K 435



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 88/198 (44%), Gaps = 42/198 (21%)

Query: 20  IGPARYTHNVGNSVK-----PASDL--NRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWN 71
           +G A+Y + V +  +     P S++    AL+D ++  G +++A ++FE+M +R+ ++++
Sbjct: 285 LGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYS 344

Query: 72  TMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRP 131
           +MI  +A                                +GL   A ELF +M     +P
Sbjct: 345 SMIVGFA-------------------------------MHGLAGAAMELFDEMLKTEIKP 373

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAEY 189
           ++ T   VL  CS  G++++G+Q     ++ C  +         +VD+  +   + EA  
Sbjct: 374 NRVTFIGVLTACSHAGMVEQGQQLFAM-MEECHGVAPSEDHYACMVDLLGRAGRLEEALN 432

Query: 190 LFKMFPDGKNHVAWTTMI 207
           L KM P   +   W  ++
Sbjct: 433 LVKMMPMNPHGGVWGALL 450


>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Cucumis sativus]
          Length = 598

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 225/556 (40%), Positives = 345/556 (62%), Gaps = 1/556 (0%)

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           G Q+H  IL  G +    V   LI++Y+K      + ++ + +   +  +W+S+I  FA+
Sbjct: 44  GLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQ 103

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
                 AL  F++M    ++ DD  YPS           +  KSVH L VKTG+    FV
Sbjct: 104 NEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFV 163

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
            ++L+DMYAK G +  A  +F+ M +++V+SW+ +I G A      EAL  F    I  +
Sbjct: 164 GSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDV 223

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
             +    SS++  C+  T LE G+ +H + LK    SS  V ++L+ +Y+KCG I  A +
Sbjct: 224 DVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQ 283

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGL 553
           VFD + TR++  W ++++ CAQ+   +     +++M   G KP++I+F+ +L+ACSHAGL
Sbjct: 284 VFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGL 343

Query: 554 AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
            E  R YF S+ + YGI+P  +HYA ++DLLGR+GKL EA +++ QM   P  +VW ALL
Sbjct: 344 VEKGREYF-SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALL 402

Query: 614 SACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRK 673
           + CR+H D E+    A+ + E++  ++  +V LSN Y+ AG++E+AAR+RK+++ RG++K
Sbjct: 403 TGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKK 462

Query: 674 EPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEG 733
           E G SWVE  ++VH F + DR H    +IY K++E+   +++AGYV D +F L  V+ E 
Sbjct: 463 ETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEE 522

Query: 734 KEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSN 793
           K   + YHSE+LA+AFGL+T P G PIR+ KNLRVCGDCH A+K++S    R +I+RD+N
Sbjct: 523 KNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNN 582

Query: 794 RFHHFKAGNCSCGDYW 809
           RFH F+ G CSCGDYW
Sbjct: 583 RFHRFEDGKCSCGDYW 598



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 212/414 (51%), Gaps = 14/414 (3%)

Query: 130 RPSQYTLD------NVLRLCSL------KGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
           +PSQ  L+      N  ++C+L         L++G Q H + +K        V   L+++
Sbjct: 10  KPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINL 69

Query: 178 YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
           Y+K +    +  +F   P  K+   W+++I+ ++QN     A++ FR M  +GV  +   
Sbjct: 70  YSKTQLPLFSLQVFDETPK-KSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHI 128

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           +PS   AC  +   D G  VH   + +G+  +V+V S+L+DMYAKCG++  AR L +   
Sbjct: 129 YPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMP 188

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
             N VSW+ MI G+A+     EAL+LFK+    D+ ++DFT+ SV+   +S+  L   K 
Sbjct: 189 ERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKL 248

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           +H L +K  F+   FV +ALI +Y+K G ++ A+ VF+ +  +++  W S++  CA H  
Sbjct: 249 IHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAH 308

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
            +     F +M   G+ P+ +   S+L AC+   ++E G++  ++    G         S
Sbjct: 309 TQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYAS 368

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVIT-WTALIMGCAQNGKGKEALQFYDQML 530
           LV +  + G + +A  V   M  R   + W AL+ GC  +   + A    D++L
Sbjct: 369 LVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRIL 422



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/338 (31%), Positives = 178/338 (52%), Gaps = 8/338 (2%)

Query: 88  KLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKG 147
           ++F+ETP K+  TWSS+I  ++     + A + F +M  +G RP  +   +  + C   G
Sbjct: 81  QVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKAC---G 137

Query: 148 LLQR---GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWT 204
            L+R   G+  H  A+KT +  + FV + LVDMYAKC  I +A +LF   P+ +N V+W+
Sbjct: 138 FLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPE-RNVVSWS 196

Query: 205 TMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS 264
            MI GY+Q   G +A+  F+   +E V+ N FTF S++  C++ +  + G  +HG  L  
Sbjct: 197 GMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKM 256

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLF 324
            F+++ +V SALI +Y+KCG ++ A ++ +     N   WNSM++  A+    +    LF
Sbjct: 257 SFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLF 316

Query: 325 KKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
           ++M    +K +  ++ SVL   +    +   +   SL+   G E       +L+D+  + 
Sbjct: 317 EEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRA 376

Query: 385 GNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEA 421
           G L  A  V   M  +   S W +L+TGC  H   E A
Sbjct: 377 GKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMA 414



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 126/246 (51%), Gaps = 2/246 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  ++++  YA  G + +A+ LF+E P +N  +WS +IYGY+     +EA  LF Q  
Sbjct: 160 DVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQAL 219

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           +E    + +T  +V+R+CS    L+ G+  HG  +K  FD ++FV + L+ +Y+KC  I 
Sbjct: 220 IEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIE 279

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A  +F   P  +N   W +M+   +Q+ +  +    F +M   G++ N  +F S+L AC
Sbjct: 280 GAYQVFDEIPT-RNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYAC 338

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI-DNEVSW 304
           +     + G +    +   G E      ++L+D+  + G L  A  +++   +   E  W
Sbjct: 339 SHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVW 398

Query: 305 NSMIVG 310
            +++ G
Sbjct: 399 GALLTG 404



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 161/344 (46%), Gaps = 21/344 (6%)

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
           ++L  F  +  L     +H+ I+K G +    V++ LI++Y+K      +  VF+    K
Sbjct: 30  NLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKK 89

Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
              +W+S+I+  A + +   AL++F  M   G+ PD  +  S   AC  L   + G+ VH
Sbjct: 90  SSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVH 149

Query: 461 AVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGK 520
            + +K+G    + V +SLV +YAKCG I DA  +FD M  R+V++W+ +I G AQ   G 
Sbjct: 150 CLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGV 209

Query: 521 EALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPGPDHY- 577
           EAL  + Q L      +  TF  ++  CS +   E  +        ++G  +K   D   
Sbjct: 210 EALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKL-------IHGLCLKMSFDSSS 262

Query: 578 ---ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE----LGERAAN 630
              + +I L  + G +  A  + D+ +   +  +W ++L AC  H   +    L E   N
Sbjct: 263 FVGSALISLYSKCGVIEGAYQVFDE-IPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGN 321

Query: 631 NLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
               ++P N + ++ +    S AG  E       LM+  GI  E
Sbjct: 322 --VGMKP-NFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPE 362



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 5/173 (2%)

Query: 42  ALVDFSNSGEIDEAGQLFE----KMS-DRDGFTWNTMIAAYANSGRLREAKKLFNETPFK 96
           +++   +S    E G+L      KMS D   F  + +I+ Y+  G +  A ++F+E P +
Sbjct: 232 SVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTR 291

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
           N   W+S++   + +      F LF +M   G +P+  +  +VL  CS  GL+++G ++ 
Sbjct: 292 NLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYF 351

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
                   +        LVD+  +   + EA  + K  P       W  ++TG
Sbjct: 352 SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTG 404


>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
 gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
          Length = 650

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 228/583 (39%), Positives = 363/583 (62%), Gaps = 10/583 (1%)

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
           Q T+  ++ +C   ++     +VH  +L +GF+ + ++ + LI+MY+    +D+AR++ +
Sbjct: 70  QHTYELLILSCTHQNSLLDAQRVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARKVFD 129

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN------CFAS 348
            +       +N++    +  G  +E L+++++M++  I  D FTY  VL       CF S
Sbjct: 130 KTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVS 189

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
              LN  + +H+ I++ G++GY  +   L+DMYAK G +  A  VFN M  K+V+SW+++
Sbjct: 190 --LLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAM 247

Query: 409 ITGCAYHGSYEEALKYFSDMRI--SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
           I   A +G   EAL+ F ++ +    +CP+ V + S+L ACA L  LE G+ +H   L+ 
Sbjct: 248 IACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRK 307

Query: 467 GGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFY 526
           G  S L V ++LV +YA+CG +    RVFD M  RDV++W +LI     +G GK+A+  +
Sbjct: 308 GLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIF 367

Query: 527 DQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGR 586
           ++M   G +P  I+FV +L ACSHAGL +  +  F SM   +GI P  +HYACM+DLLGR
Sbjct: 368 EEMTYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGR 427

Query: 587 SGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQL 646
           + +L EA  +++ M  EP   VW +LL +CR+H ++EL ERA+  LF+LEP NA  YV L
Sbjct: 428 ANRLEEAAKIIENMRIEPGPKVWGSLLGSCRIHCNVELAERASIRLFDLEPTNAGNYVLL 487

Query: 647 SNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKI 706
           +++Y+ AG W+   RV+KL+++RG++K PG SW+E   +++ F+S D  +P    +++ +
Sbjct: 488 ADIYAEAGMWDGVKRVKKLLEARGLQKVPGRSWIEVKRKIYSFVSVDEVNPRMEQLHALL 547

Query: 707 DEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNL 766
            ++ + +KE GYVP     L++++   KE  +  HSEKLAVAFGL+   +G  IRI K+L
Sbjct: 548 VKLSMELKEEGYVPQTKVVLYDLKAAEKERIVLGHSEKLAVAFGLINSSKGEVIRITKSL 607

Query: 767 RVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           R+C DCH+  K+IS    + I++RD NRFHHF+ G CSCGDYW
Sbjct: 608 RLCEDCHSFTKFISKFANKEILVRDVNRFHHFRDGVCSCGDYW 650



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 192/373 (51%), Gaps = 9/373 (2%)

Query: 57  QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
            L E   D+D F    +I  Y+    +  A+K+F++T  +  + +++L    S  G   E
Sbjct: 95  HLLENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEE 154

Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLC----SLKGLLQRGEQFHGYAIKTCFDLNAFVVT 172
              ++ +M   G    ++T   VL+ C        LL +G + H + ++  +D    ++T
Sbjct: 155 VLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMT 214

Query: 173 GLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
            LVDMYAK  C+  A  +F   P  KN V+W+ MI  Y++NG  F+A+E FR++ +E  +
Sbjct: 215 TLVDMYAKFGCVSNASCVFNQMP-VKNVVSWSAMIACYAKNGKAFEALELFRELMLETQD 273

Query: 233 --SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
              N  T  S+L ACAA++A + G  +HG IL  G ++ + V SAL+ MYA+CG L+  +
Sbjct: 274 LCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQ 333

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
           R+ +  +  + VSWNS+I  +   GF K+A+ +F++M    ++    ++ SVL   +   
Sbjct: 334 RVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAG 393

Query: 351 DLNNAKSV-HSLIVKTGFEGYKFVNNALIDMYAKQGNL-DCAFMVFNLMQDKDVISWTSL 408
            ++  K + +S+ V  G          ++D+  +   L + A ++ N+  +     W SL
Sbjct: 394 LVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSL 453

Query: 409 ITGCAYHGSYEEA 421
           +  C  H + E A
Sbjct: 454 LGSCRIHCNVELA 466



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/249 (22%), Positives = 96/249 (38%), Gaps = 49/249 (19%)

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
           NN LI    KQGNL  A  + +L  +    ++  LI  C +  S  +A            
Sbjct: 42  NNKLIQSLCKQGNLTQALELLSLEPNPAQHTYELLILSCTHQNSLLDA------------ 89

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
                                  Q+VH   L++G      +   L+ +Y+    I++A +
Sbjct: 90  -----------------------QRVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARK 126

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA-- 551
           VFD    R +  + AL    +  G G+E L  Y +M + G   D  T+  +L AC  +  
Sbjct: 127 VFDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASEC 186

Query: 552 --GLAENARWYFESMDKVYGIKPGPDHY----ACMIDLLGRSGKLIEAKALLDQMVGEPD 605
              L    R     +     ++ G D Y      ++D+  + G +  A  + +QM  + +
Sbjct: 187 FVSLLNKGREIHAHI-----LRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVK-N 240

Query: 606 ATVWKALLS 614
              W A+++
Sbjct: 241 VVSWSAMIA 249


>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 697

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 242/639 (37%), Positives = 374/639 (58%), Gaps = 12/639 (1%)

Query: 172 TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV 231
           T ++  Y +   + +A  LF   P  ++ V+W +MI+G  + G    A++ F +M     
Sbjct: 70  TKMISGYTRSNRLVDALNLFDEMPL-RDVVSWNSMISGCVECGDIDTAVKMFDEMP---- 124

Query: 232 ESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR 291
           E +  ++ +++  C      D   ++  C +      ++   +A++  Y + G +D A +
Sbjct: 125 ERSVVSWTAMVNGCFRFGMVDQAERLF-CQMPV---KDIAAWNAMVHGYLQFGKVDDALK 180

Query: 292 LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID 351
           L +     N +SW +MI G  +     EAL+LFK M    IK    T+  V+   A+   
Sbjct: 181 LFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTCVITACANAPA 240

Query: 352 LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITG 411
            +    VH  I+K+GF   ++V  +LI +YA     + +  VF  M  + V  WT+L++G
Sbjct: 241 FHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHEKVAVWTALLSG 300

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
            + +  +E+AL  FS+M  + I P+    +S L++C+ L  L++G+++H V +K G  + 
Sbjct: 301 YSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGKEIHGVAVKLGLGTV 360

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
             V NSLV++Y+  G +NDA  VF  +  + +++W ++I+GCAQ+G+GK A   + QM+ 
Sbjct: 361 AFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIR 420

Query: 532 RGTKPDYITFVGLLFACSHAGLAENARWYFESMDK-VYGIKPGPDHYACMIDLLGRSGKL 590
              +PD ITF GLL ACSH G  +  R  F  +   +  I     HY CM+D+LGR G+L
Sbjct: 421 LNKEPDEITFTGLLSACSHCGFLQKGRKLFYYISSGLNHIDRKIQHYTCMVDILGRCGEL 480

Query: 591 IEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMY 650
            EA+ L++ MV +P+  VW ALLSACR+H D++ GE+AA  +F L+  ++  YV LSN+Y
Sbjct: 481 KEAEKLIESMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIY 540

Query: 651 STAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIM 710
           ++AG+W   +++R  MK +GI K+PG SWV    + H F S DR H LR  I+ K++ + 
Sbjct: 541 ASAGRWSSVSKLRVKMKQKGIMKKPGSSWVVIRGKKHEFFSGDRPHCLR--IFEKLEFLR 598

Query: 711 LLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCG 770
             +KE GYVPD   ALH+VE+E KE  L YHSE+LA+AFGL+   +G+ + + KNLRVC 
Sbjct: 599 EKLKELGYVPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSTVTVMKNLRVCE 658

Query: 771 DCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           DCHT +K IS V    I+LRD  RFHHFK G CSCGDYW
Sbjct: 659 DCHTVIKLISRVVGCKIVLRDPTRFHHFKNGMCSCGDYW 697



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 137/479 (28%), Positives = 234/479 (48%), Gaps = 47/479 (9%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
            + +  ++ S  + +A  LF++M  RD  +WN+MI+     G +  A K+F+E P ++  
Sbjct: 70  TKMISGYTRSNRLVDALNLFDEMPLRDVVSWNSMISGCVECGDIDTAVKMFDEMPERSVV 129

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           +W++++ G   +G+  +A  LF QM                    +K +       HGY 
Sbjct: 130 SWTAMVNGCFRFGMVDQAERLFCQM-------------------PVKDIAAWNAMVHGY- 169

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
                     +  G VD         +A  LFK  P  KN ++WTTMI G  QN    +A
Sbjct: 170 ----------LQFGKVD---------DALKLFKQMPR-KNVISWTTMICGLDQNERSGEA 209

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           +  F++M    ++S   TF  ++TACA   A   G QVHG I+ SGF    YV ++LI +
Sbjct: 210 LNLFKNMLRCCIKSTSRTFTCVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITL 269

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           YA C   + +R++      +    W +++ G++    H++AL++F +M    I  +  T+
Sbjct: 270 YANCKRTEDSRKVFGEMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTF 329

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
            S LN  ++   L+  K +H + VK G     FV N+L+ MY+  GN++ A  VF  +  
Sbjct: 330 ASGLNSCSALGTLDWGKEIHGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFK 389

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
           K ++SW S+I GCA HG  + A   F  M      PD +  + +LSAC+    L+ G+++
Sbjct: 390 KSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLQKGRKL 449

Query: 460 HAVFLKSGGCSSLSVD----NSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
              +  S G + +         +V +  +CG + +A ++ +SM  + + + W AL+  C
Sbjct: 450 --FYYISSGLNHIDRKIQHYTCMVDILGRCGELKEAEKLIESMVVKPNEMVWLALLSAC 506



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 194/412 (47%), Gaps = 33/412 (8%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS 109
           G +D+A +LF +M  +D   WN M+  Y   G++ +A KLF + P KN  +W+++I G  
Sbjct: 142 GMVDQAERLFCQMPVKDIAAWNAMVHGYLQFGKVDDALKLFKQMPRKNVISWTTMICGLD 201

Query: 110 NYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAF 169
                 EA  LF  M     + +  T   V+  C+       G Q HG+ IK+ F    +
Sbjct: 202 QNERSGEALNLFKNMLRCCIKSTSRTFTCVITACANAPAFHMGTQVHGFIIKSGFLYEEY 261

Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
           V   L+ +YA CK   ++  +F      K  V WT +++GYS N     A+  F +M   
Sbjct: 262 VTASLITLYANCKRTEDSRKVFGEMVHEKVAV-WTALLSGYSLNRKHEDALNVFSEMIRN 320

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
            +  NQ TF S L +C+A+   D+G ++HG  +  G     +V ++L+ MY+  G+++ A
Sbjct: 321 SILPNQSTFASGLNSCSALGTLDWGKEIHGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDA 380

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
             +       + VSWNS+IVG A+ G  K A  +F +M   + + D+ T+  +L+  +  
Sbjct: 381 VSVFIEIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACS-- 438

Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
                    H   ++ G + + ++++ L  +                  D+ +  +T ++
Sbjct: 439 ---------HCGFLQKGRKLFYYISSGLNHI------------------DRKIQHYTCMV 471

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
                 G  +EA K    M +    P+ +V  ++LSAC   + ++ G++  A
Sbjct: 472 DILGRCGELKEAEKLIESMVVK---PNEMVWLALLSACRMHSDVDRGEKAAA 520



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 18/165 (10%)

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
           +S+   ++  Y +   + DA  +FD M  RDV++W ++I GC + G    A++ +D+M  
Sbjct: 66  VSLYTKMISGYTRSNRLVDALNLFDEMPLRDVVSWNSMISGCVECGDIDTAVKMFDEMPE 125

Query: 532 RGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA--CMIDLLGRSGK 589
           R      +++  ++  C   G+ + A   F  M       P  D  A   M+    + GK
Sbjct: 126 RSV----VSWTAMVNGCFRFGMVDQAERLFCQM-------PVKDIAAWNAMVHGYLQFGK 174

Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFE 634
           + +A  L  QM    +   W  ++  C +  +   GE  A NLF+
Sbjct: 175 VDDALKLFKQM-PRKNVISWTTMI--CGLDQNERSGE--ALNLFK 214



 Score = 42.7 bits (99), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 16/151 (10%)

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           +++A  VFD + +  V  +T +I G  ++ +  +AL  +D+M  R    D +++  ++  
Sbjct: 51  LDEAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPLR----DVVSWNSMISG 106

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
           C   G  + A   F+ M +   +      +  M++   R G + +A+ L  QM  + D  
Sbjct: 107 CVECGDIDTAVKMFDEMPERSVVS-----WTAMVNGCFRFGMVDQAERLFCQMPVK-DIA 160

Query: 608 VWKALLSACRVHGDLELGE-RAANNLFELEP 637
            W A+     VHG L+ G+   A  LF+  P
Sbjct: 161 AWNAM-----VHGYLQFGKVDDALKLFKQMP 186


>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
 gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
          Length = 665

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 253/682 (37%), Positives = 381/682 (55%), Gaps = 44/682 (6%)

Query: 132 SQYTLDNVLRLCSLKGL--LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC--KCIFEA 187
           SQ +   +L L + K    L   +Q H  A++T    + +V   LV  YA      +  A
Sbjct: 24  SQLSQKTILDLLNTKSSTSLHHLKQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFA 83

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F+  P+  N   +  +I G  QN    KAI C+  M +     N+FT+P++  AC A
Sbjct: 84  LKVFEYVPN-PNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTA 142

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
             A + G QVH  ++  G   +V+++SA I MY   G+++ ARR+L      + + +N+M
Sbjct: 143 AEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAM 202

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           I G+ + G  + A  LF  M  +++                                   
Sbjct: 203 IDGYLKCGEVEAAKELFWSMEDKNVG---------------------------------- 228

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
                  N ++   AK G ++ A  +FN M++K+ ISW+++I G    G Y+EAL+ F+ 
Sbjct: 229 -----SWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNV 283

Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
           M+   I P   V+SS+L+ACA L  L+ G+ +HA    +       +  +LV +YAKCG 
Sbjct: 284 MQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGR 343

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           ++ A  VF+ M  ++V TW A+I G   +G+ ++A++ + +M  +  +P+ IT +G+L A
Sbjct: 344 LDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSA 403

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
           C+H+G+ +     F SM++VYGI+PG +HY C++DLLGR+G L EA+ ++  M  EP A 
Sbjct: 404 CAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAA 463

Query: 608 VWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
           VW ALL ACR HGD+ELGER    L ELEP N+  Y  LSN+Y+ AG+W+D A VRKLMK
Sbjct: 464 VWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKLMK 523

Query: 668 SRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALH 727
            RG++   G S ++ +  VH F   D  HP   +IY  +  ++  +K  G+ P+ +  L 
Sbjct: 524 ERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLKNMIKRLKMEGFSPNTSQVLF 583

Query: 728 NVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHI 787
           ++EEE KE  L YHSEKLA+AFGL+    G  I + KNLR+C DCH+A K IS VY R I
Sbjct: 584 DIEEEEKEAELQYHSEKLAIAFGLINTKPGTTIHVVKNLRMCEDCHSAFKLISQVYDREI 643

Query: 788 ILRDSNRFHHFKAGNCSCGDYW 809
           I+RD  R+HHFK G CSC D+W
Sbjct: 644 IVRDRARYHHFKTGTCSCKDFW 665



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 136/277 (49%), Gaps = 4/277 (1%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           A++D +   GE++ A +LF  M D++  +WN M++  A  G + EA++LFNE   KN  +
Sbjct: 201 AMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEIS 260

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
           WS++I GY   G   EA E+F  MQ E  RP ++ L +VL  C+  G L +G   H Y  
Sbjct: 261 WSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVN 320

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAI 220
                 +A + T LVDMYAKC  +  A  +F+   + K    W  MI G   +G    AI
Sbjct: 321 NNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKM-EKKEVFTWNAMICGLGMHGRAEDAI 379

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDM 279
           E F  M+ +    N  T   +L+ACA     D G ++   +    G E  +     ++D+
Sbjct: 380 ELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDL 439

Query: 280 YAKCGDLDSARRLLEYSEIDNEVS-WNSMIVGFARQG 315
             + G L  A  ++    ++   + W +++    + G
Sbjct: 440 LGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHG 476



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 129/516 (25%), Positives = 210/516 (40%), Gaps = 109/516 (21%)

Query: 65  RDGFTWNTMIAAYANS--GRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFW 122
           +D +   T++  YAN     L  A K+F   P  N F ++ +I G        +A   ++
Sbjct: 60  QDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYY 119

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCF------------------ 164
           +M +   RP+++T   + + C+     + G Q H + IK                     
Sbjct: 120 KMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFG 179

Query: 165 -----------DLNAFVV--TGLVDMYAKC-----------------------------K 182
                      D N+ V+    ++D Y KC                             K
Sbjct: 180 EVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAK 239

Query: 183 C--IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
           C  I EA  LF    + KN ++W+ MI GY + GY  +A+E F  M+ E +   +F   S
Sbjct: 240 CGMIEEARELFNEMKE-KNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSS 298

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           +L ACA + A D G  +H  + ++    +  + +AL+DMYAKCG LD A  + E  E   
Sbjct: 299 VLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKE 358

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
             +WN+MI G    G  ++A+ LF KM  +  + +  T   VL+  A           HS
Sbjct: 359 VFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACA-----------HS 407

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
            +V  G      + N++ ++Y  +  ++    V +L+    ++            G  EE
Sbjct: 408 GMVDEGLR----IFNSMEEVYGIEPGMEHYGCVVDLLGRAGLL------------GEAEE 451

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS--- 477
            + Y   M      P   V  ++L AC +   +E G++V  + L+      L   NS   
Sbjct: 452 VM-YSMPME-----PSAAVWGALLGACRKHGDVELGERVGKILLE------LEPQNSGRY 499

Query: 478 --LVLVYAKCGCINDANRVFDSMHTRDVITWTALIM 511
             L  +YA+ G  +D   V   M  R V T T + M
Sbjct: 500 ALLSNIYARAGRWDDVANVRKLMKERGVKTSTGISM 535


>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 231/548 (42%), Positives = 326/548 (59%), Gaps = 32/548 (5%)

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
           +Y +  N  SWNS+I   AR G   EAL  F  M    +K +  T+P  +   ++ +DL+
Sbjct: 34  KYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLH 93

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL-------------------------- 387
           + +  H   +  GFE   FV++AL+DMY+K G L                          
Sbjct: 94  SGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYV 153

Query: 388 -----DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG-ICPDHVVVS 441
                  A  VF+ M ++DVISW S+I   A +G   E+++ F  M   G I  + V +S
Sbjct: 154 QNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLS 213

Query: 442 SILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR 501
           ++L ACA       G+ +H   +K G  S++ V  S++ +Y KCG +  A + FD M  +
Sbjct: 214 AVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREK 273

Query: 502 DVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYF 561
           +V +W+A++ G   +G  KEAL+ + +M   G KP+YITFV +L ACSHAGL E    +F
Sbjct: 274 NVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWF 333

Query: 562 ESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGD 621
           ++M   + ++PG +HY CM+DLLGR+G L EA  L+  M   PD  VW ALL ACR+H +
Sbjct: 334 KAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKN 393

Query: 622 LELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVE 681
           ++LGE +A  LFEL+P N   YV LSN+Y+ AG+WED  R+R LMK+ G+ K PG S V+
Sbjct: 394 VDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVD 453

Query: 682 TNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYH 741
              +VH+F+  DR HP    IY  ++++ + ++E GYVPDM   LH+V  E KE+ L  H
Sbjct: 454 IKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLRVH 513

Query: 742 SEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAG 801
           SEKLAVAFG++    G  I I KNLRVCGDCHTA+K+IS +  R I++RDS RFHHF+ G
Sbjct: 514 SEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDG 573

Query: 802 NCSCGDYW 809
            CSCGDYW
Sbjct: 574 LCSCGDYW 581



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 179/370 (48%), Gaps = 58/370 (15%)

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           LF  + D  N  +W ++I   +++G   +A+  F  MR   ++ N+ TFP  + +C+A+ 
Sbjct: 31  LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 90

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
               G Q H   L  GFE +++V SAL+DMY+KCG+L  AR L +     N VSW SMI 
Sbjct: 91  DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 150

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN------------------ID 351
           G+ +      AL +F  M  RD+     ++ S++  +A N                  I+
Sbjct: 151 GYVQNDDAHRALRVFDGMAERDV----ISWNSIIAVYAQNGMSTESMEIFHRMVKDGEIN 206

Query: 352 LNN------------------AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
            N                    K +H  ++K G E   FV  ++IDMY K G ++ A   
Sbjct: 207 YNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKA 266

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
           F+ M++K+V SW++++ G   HG  +EAL+ F +M ++G+ P+++   S+L+AC+   +L
Sbjct: 267 FDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLL 326

Query: 454 E-----FGQQVHAVFLKSG----GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DV 503
           E     F    H   ++ G    GC        +V +  + G + +A  +   M  R D 
Sbjct: 327 EEGWHWFKAMSHEFDVEPGVEHYGC--------MVDLLGRAGYLKEAFDLIKGMKLRPDF 378

Query: 504 ITWTALIMGC 513
           + W AL+  C
Sbjct: 379 VVWGALLGAC 388



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 182/387 (47%), Gaps = 47/387 (12%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFK-NFFTWSSLIYGYSNYGLDIEAFELFWQMQL 126
           F+W      Y+N+  L     LFN+   K N F+W+S+I   +  G  +EA   F  M+ 
Sbjct: 13  FSWKIYRRRYSNNPNL---TTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRK 69

Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
              +P++ T    ++ CS    L  G Q H  A+   F+ + FV + LVDMY+KC  + +
Sbjct: 70  LSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRD 129

Query: 187 AEYLFKMFPDGKNHVAWTTMITG-------------------------------YSQNGY 215
           A  LF      +N V+WT+MITG                               Y+QNG 
Sbjct: 130 ARTLFDEISH-RNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGM 188

Query: 216 GFKAIECFRDMRVEG-VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQS 274
             +++E F  M  +G +  N  T  ++L ACA   ++  G  +H  ++  G E+NV+V +
Sbjct: 189 STESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGT 248

Query: 275 ALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKI 334
           ++IDMY KCG ++ AR+  +     N  SW++M+ G+   G  KEAL +F +M+   +K 
Sbjct: 249 SIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKP 308

Query: 335 DDFTYPSVLNCFASNIDLNNA-----KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDC 389
           +  T+ SVL   +    L           H   V+ G E Y      ++D+  + G L  
Sbjct: 309 NYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHY----GCMVDLLGRAGYLKE 364

Query: 390 AFMVFNLMQDK-DVISWTSLITGCAYH 415
           AF +   M+ + D + W +L+  C  H
Sbjct: 365 AFDLIKGMKLRPDFVVWGALLGACRMH 391



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 144/283 (50%), Gaps = 13/283 (4%)

Query: 34  KPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE 92
           +P   ++ ALVD +S  GE+ +A  LF+++S R+  +W +MI  Y  +     A ++F+ 
Sbjct: 108 EPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDG 167

Query: 93  TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVLRLCSLKGLLQR 151
              ++  +W+S+I  Y+  G+  E+ E+F +M  +G    +  TL  VL  C+  G  + 
Sbjct: 168 MAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRL 227

Query: 152 GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYS 211
           G+  H   IK   + N FV T ++DMY KC  +  A   F    + KN  +W+ M+ GY 
Sbjct: 228 GKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMRE-KNVKSWSAMVAGYG 286

Query: 212 QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD-----FGAQVHGCILSSGF 266
            +G+  +A+E F +M + GV+ N  TF S+L AC+     +     F A  H   +  G 
Sbjct: 287 MHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGV 346

Query: 267 EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE-VSWNSMI 308
           E        ++D+  + G L  A  L++  ++  + V W +++
Sbjct: 347 EH----YGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALL 385


>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 588

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 223/556 (40%), Positives = 343/556 (61%), Gaps = 1/556 (0%)

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           G Q+HG I+ SG      V + LI+ Y+K      +RR  E S   +  +W+S+I  FA+
Sbjct: 34  GLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSATTWSSIISCFAQ 93

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
                 +L   +KM A  ++ DD   PS           +  KSVH L +KTG++   FV
Sbjct: 94  NELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHCLSMKTGYDADVFV 153

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
            ++L+DMYAK G +  A  +F+ M  ++V++W+ ++ G A  G  EEAL  F +     +
Sbjct: 154 GSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLFKEALFENL 213

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
             +    S+++S CA  T+LE G+Q+  + +KS   SS  V +SLV +Y+KCG +  A +
Sbjct: 214 AVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQ 273

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGL 553
           VFD +  R++  W A++  CAQ+   ++ ++ + +M   G KP++ITF+ +L ACSHAGL
Sbjct: 274 VFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGL 333

Query: 554 AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
            +  ++YF+ M K   I+P   HYA ++D+LGR+GKL EA  ++  M  +P  +VW ALL
Sbjct: 334 VDEGKYYFDLM-KESRIEPTDKHYASLVDMLGRAGKLEEALEIVTNMPIDPTESVWGALL 392

Query: 614 SACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRK 673
           ++C +H + EL   AA+ +FEL P+++  ++ LSN Y+  G++EDAA+ RKL++ RG +K
Sbjct: 393 TSCTIHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKK 452

Query: 674 EPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEG 733
           E G SWVE  ++VH F + +R H    +IY K+ E+   +++AGYV D ++ L  V+ + 
Sbjct: 453 ETGLSWVEERNKVHTFAAGERRHERSKEIYEKLAELGEEMEKAGYVADTSYVLREVDGDE 512

Query: 734 KEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSN 793
           K   + YHSE+LA+AFGL+T P   PIR+ KNLRVCGDCH A+K++S    R II+RD+N
Sbjct: 513 KNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSICTRRVIIVRDNN 572

Query: 794 RFHHFKAGNCSCGDYW 809
           RFH F+ G CSC DYW
Sbjct: 573 RFHRFEDGKCSCNDYW 588



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 206/365 (56%), Gaps = 2/365 (0%)

Query: 151 RGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
           +G Q HGY +K+   L   V   L++ Y+K +  F++   F+  P  K+   W+++I+ +
Sbjct: 33  KGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQ-KSATTWSSIISCF 91

Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV 270
           +QN   + ++E  R M    +  +    PS   +C  +S  D G  VH   + +G++A+V
Sbjct: 92  AQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHCLSMKTGYDADV 151

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
           +V S+L+DMYAKCG++  AR++ +   + N V+W+ M+ G+A+ G ++EAL LFK+    
Sbjct: 152 FVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLFKEALFE 211

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
           ++ ++D+++ +V++  A++  L   + +  L +K+ F+   FV ++L+ +Y+K G+L+ A
Sbjct: 212 NLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGA 271

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
           + VF+ +  +++  W +++  CA H   ++ ++ F  M++SG+ P+ +   ++L+AC+  
Sbjct: 272 YQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHA 331

Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT-WTAL 509
            +++ G+    +  +S    +     SLV +  + G + +A  +  +M      + W AL
Sbjct: 332 GLVDEGKYYFDLMKESRIEPTDKHYASLVDMLGRAGKLEEALEIVTNMPIDPTESVWGAL 391

Query: 510 IMGCA 514
           +  C 
Sbjct: 392 LTSCT 396



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 184/352 (52%), Gaps = 2/352 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +I  Y+ S    ++++ F ++P K+  TWSS+I  ++   L   + E   +M     R
Sbjct: 54  NNLINFYSKSQLPFDSRRAFEDSPQKSATTWSSIISCFAQNELPWMSLEFLRKMMAGSLR 113

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  + L +  + C +      G+  H  ++KT +D + FV + LVDMYAKC  I  A  +
Sbjct: 114 PDDHVLPSATKSCGILSRCDIGKSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKM 173

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P  +N V W+ M+ GY+Q G   +A+  F++   E +  N ++F ++++ CA  + 
Sbjct: 174 FDEMP-LRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSTVISVCANSTL 232

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
            + G Q+ G  + S F+++ +V S+L+ +Y+KCGDL+ A ++ +   + N   WN+M+  
Sbjct: 233 LELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQVFDEVPMRNLGIWNAMLKA 292

Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
            A+    ++ + LFK+M    +K +  T+ +VLN  +    ++  K    L+ ++  E  
Sbjct: 293 CAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGKYYFDLMKESRIEPT 352

Query: 371 KFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
                +L+DM  + G L+ A  +V N+  D     W +L+T C  H + E A
Sbjct: 353 DKHYASLVDMLGRAGKLEEALEIVTNMPIDPTESVWGALLTSCTIHKNTELA 404



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 128/247 (51%), Gaps = 2/247 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D F  ++++  YA  G +  A+K+F+E P +N  TWS ++YGY+  G + EA  LF +
Sbjct: 148 DADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLFKE 207

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
              E    + Y+   V+ +C+   LL+ G Q  G  IK+ FD ++FV + LV +Y+KC  
Sbjct: 208 ALFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGD 267

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           +  A  +F   P  +N   W  M+   +Q+ +  K IE F+ M++ G++ N  TF ++L 
Sbjct: 268 LEGAYQVFDEVP-MRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLN 326

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEV 302
           AC+     D G      +  S  E      ++L+DM  + G L+ A  ++    ID  E 
Sbjct: 327 ACSHAGLVDEGKYYFDLMKESRIEPTDKHYASLVDMLGRAGKLEEALEIVTNMPIDPTES 386

Query: 303 SWNSMIV 309
            W +++ 
Sbjct: 387 VWGALLT 393



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 87/197 (44%), Gaps = 15/197 (7%)

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
           C ++  +  +L + A    +  G Q+H   +KSG      V N+L+  Y+K     D+ R
Sbjct: 12  CHNYNQICDLLLSSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRR 71

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGL 553
            F+    +   TW+++I   AQN     +L+F  +M+A   +PD         +C   G+
Sbjct: 72  AFEDSPQKSATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSC---GI 128

Query: 554 AENARWYFESMDKVYGIKPGPDHY----ACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
              +R           +K G D      + ++D+  + G+++ A+ + D+M    +   W
Sbjct: 129 L--SRCDIGKSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLR-NVVTW 185

Query: 610 KALLSACRVHGDLELGE 626
             ++     +G  ++GE
Sbjct: 186 SGMM-----YGYAQMGE 197


>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g52630-like [Cucumis
           sativus]
          Length = 598

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 225/556 (40%), Positives = 344/556 (61%), Gaps = 1/556 (0%)

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           G Q+H  IL  G +    V   LI++Y+K      + ++ + +   +  +W+S+I  FA+
Sbjct: 44  GLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQ 103

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
                 AL  F++M    ++ DD  YPS           +  KSVH L VKTG+    FV
Sbjct: 104 NEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFV 163

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
            ++L+DMYAK G +  A  +F+ M +++V+SW+ +I G A      EAL  F    I  +
Sbjct: 164 GSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDV 223

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
             +    SS++  C+  T LE G+ +H + LK    SS  V ++L+ +Y+KCG I  A +
Sbjct: 224 DVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQ 283

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGL 553
           VFD + TR++  W ++++ CAQ+   +     +++M   G KP++I F+ +L+ACSHAGL
Sbjct: 284 VFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGL 343

Query: 554 AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
            E  R YF S+ + YGI+P  +HYA ++DLLGR+GKL EA +++ QM   P  +VW ALL
Sbjct: 344 VEKGREYF-SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALL 402

Query: 614 SACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRK 673
           + CR+H D E+    A+ + E++  ++  +V LSN Y+ AG++E+AAR+RK+++ RG++K
Sbjct: 403 TGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDRGVKK 462

Query: 674 EPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEG 733
           E G SWVE  ++VH F + DR H    +IY K++E+   +++AGYV D +F L  V+ E 
Sbjct: 463 ETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAVDGEE 522

Query: 734 KEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSN 793
           K   + YHSE+LA+AFGL+T P G PIR+ KNLRVCGDCH A+K++S    R +I+RD+N
Sbjct: 523 KNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIVRDNN 582

Query: 794 RFHHFKAGNCSCGDYW 809
           RFH F+ G CSCGDYW
Sbjct: 583 RFHRFEDGKCSCGDYW 598



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 212/414 (51%), Gaps = 14/414 (3%)

Query: 130 RPSQYTLD------NVLRLCSL------KGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
           +PSQ  L+      N  ++C+L         L++G Q H + +K        V   L+++
Sbjct: 10  KPSQNPLNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINL 69

Query: 178 YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
           Y+K +    +  +F   P  K+   W+++I+ ++QN     A++ FR M  +GV  +   
Sbjct: 70  YSKTQLPLFSLQVFDETPK-KSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHI 128

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
           +PS   AC  +   D G  VH   + +G+  +V+V S+L+DMYAKCG++  AR L +   
Sbjct: 129 YPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMP 188

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
             N VSW+ MI G+A+     EAL+LFK+    D+ ++DFT+ SV+   +S+  L   K 
Sbjct: 189 ERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKL 248

Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
           +H L +K  F+   FV +ALI +Y+K G ++ A+ VF+ +  +++  W S++  CA H  
Sbjct: 249 IHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAH 308

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
            +     F +M   G+ P+ +   S+L AC+   ++E G++  ++    G         S
Sbjct: 309 TQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYAS 368

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVIT-WTALIMGCAQNGKGKEALQFYDQML 530
           LV +  + G + +A  V   M  R   + W AL+ GC  +   + A    D++L
Sbjct: 369 LVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRIL 422



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/338 (31%), Positives = 177/338 (52%), Gaps = 8/338 (2%)

Query: 88  KLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKG 147
           ++F+ETP K+  TWSS+I  ++     + A + F +M  +G RP  +   +  + C   G
Sbjct: 81  QVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKAC---G 137

Query: 148 LLQR---GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWT 204
            L+R   G+  H  A+KT +  + FV + LVDMYAKC  I +A +LF   P+ +N V+W+
Sbjct: 138 FLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPE-RNVVSWS 196

Query: 205 TMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS 264
            MI GY+Q   G +A+  F+   +E V+ N FTF S++  C++ +  + G  +HG  L  
Sbjct: 197 GMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKM 256

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLF 324
            F+++ +V SALI +Y+KCG ++ A ++ +     N   WNSM++  A+    +    LF
Sbjct: 257 SFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLF 316

Query: 325 KKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
           ++M    +K +   + SVL   +    +   +   SL+   G E       +L+D+  + 
Sbjct: 317 EEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRA 376

Query: 385 GNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEA 421
           G L  A  V   M  +   S W +L+TGC  H   E A
Sbjct: 377 GKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMA 414



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 125/246 (50%), Gaps = 2/246 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  ++++  YA  G + +A+ LF+E P +N  +WS +IYGY+     +EA  LF Q  
Sbjct: 160 DVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQAL 219

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           +E    + +T  +V+R+CS    L+ G+  HG  +K  FD ++FV + L+ +Y+KC  I 
Sbjct: 220 IEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIE 279

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A  +F   P  +N   W +M+   +Q+ +  +    F +M   G++ N   F S+L AC
Sbjct: 280 GAYQVFDEIPT-RNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYAC 338

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI-DNEVSW 304
           +     + G +    +   G E      ++L+D+  + G L  A  +++   +   E  W
Sbjct: 339 SHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVW 398

Query: 305 NSMIVG 310
            +++ G
Sbjct: 399 GALLTG 404



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 161/344 (46%), Gaps = 21/344 (6%)

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
           ++L  F  +  L     +H+ I+K G +    V++ LI++Y+K      +  VF+    K
Sbjct: 30  NLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKK 89

Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
              +W+S+I+  A + +   AL++F  M   G+ PD  +  S   AC  L   + G+ VH
Sbjct: 90  SSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVH 149

Query: 461 AVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGK 520
            + +K+G    + V +SLV +YAKCG I DA  +FD M  R+V++W+ +I G AQ   G 
Sbjct: 150 CLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGV 209

Query: 521 EALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPGPDHY- 577
           EAL  + Q L      +  TF  ++  CS +   E  +        ++G  +K   D   
Sbjct: 210 EALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKL-------IHGLCLKMSFDSSS 262

Query: 578 ---ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE----LGERAAN 630
              + +I L  + G +  A  + D+ +   +  +W ++L AC  H   +    L E   N
Sbjct: 263 FVGSALISLYSKCGVIEGAYQVFDE-IPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGN 321

Query: 631 NLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
               ++P N + ++ +    S AG  E       LM+  GI  E
Sbjct: 322 --VGMKP-NFIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPE 362



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 5/173 (2%)

Query: 42  ALVDFSNSGEIDEAGQLFE----KMS-DRDGFTWNTMIAAYANSGRLREAKKLFNETPFK 96
           +++   +S    E G+L      KMS D   F  + +I+ Y+  G +  A ++F+E P +
Sbjct: 232 SVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTR 291

Query: 97  NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
           N   W+S++   + +      F LF +M   G +P+     +VL  CS  GL+++G ++ 
Sbjct: 292 NLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYF 351

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
                   +        LVD+  +   + EA  + K  P       W  ++TG
Sbjct: 352 SLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTG 404


>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 617

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 224/550 (40%), Positives = 328/550 (59%), Gaps = 34/550 (6%)

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
           +LL+ SE+ +   WN+ +  FA      +A+SLF ++   DI  D +T   VL   +  +
Sbjct: 71  QLLDASEVTH---WNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLL 127

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVI------- 403
           D+ N K VH  + K G +   F+ N ++ +YA  G +  A  VF+ M  +DVI       
Sbjct: 128 DVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIA 187

Query: 404 ------------------------SWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVV 439
                                   SWTS+I G A  G  +EA+  F +M  +G+ P+ V 
Sbjct: 188 RLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVT 247

Query: 440 VSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH 499
           V ++L ACA++  L  G+++H    +SG   ++ V N+L+ +Y KCGC+ DA R+FD+M 
Sbjct: 248 VVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNME 307

Query: 500 TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW 559
            R V++W+A+I G A +G+ ++AL  +++M+  G KP+ +TF+G+L ACSH G+ E  R 
Sbjct: 308 ERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRK 367

Query: 560 YFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVH 619
           YF SM + YGI P  +HY CM+DL  R+G L EA   +  M   P+  VW ALL  C+VH
Sbjct: 368 YFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVH 427

Query: 620 GDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSW 679
            +++L E A  +L +L+P+N   YV LSN+Y+ AG+WED ARVRKLM+ RG++K PG S 
Sbjct: 428 KNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSS 487

Query: 680 VETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLA 739
           +     V+ F++ D  HP   +I+   ++++  +K  GYVP+ +  L ++EE+ KE  L 
Sbjct: 488 IMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKFLY 547

Query: 740 YHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFK 799
            HSEKLAV FGL+    G  IRI KNLRVC DCH A+K IS V  R I++RD NRFH FK
Sbjct: 548 RHSEKLAVVFGLIKTTPGTVIRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRFHCFK 607

Query: 800 AGNCSCGDYW 809
            G+CSCGDYW
Sbjct: 608 NGSCSCGDYW 617



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 201/418 (48%), Gaps = 41/418 (9%)

Query: 129 YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
           +RPS + L N      LK       Q H + +KT   L++  ++ +  + A       A+
Sbjct: 15  HRPSTHLLHNFTSPFELK-------QLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAK 67

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
            +F++  D      W T +  +++      AI  F  +R   +  + +T   +L AC+ +
Sbjct: 68  LIFQLL-DASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRL 126

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE-------------- 294
                G  VHG +   G ++N+++Q+ ++ +YA CG++  AR++ +              
Sbjct: 127 LDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMI 186

Query: 295 ---------------YSEID--NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
                          ++E+   N  SW SMI G+A+ G  KEA+ LF +M    +  ++ 
Sbjct: 187 ARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEV 246

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           T  +VL   A   +L   + +H    ++G+E    V N LIDMY K G L+ A  +F+ M
Sbjct: 247 TVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNM 306

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
           +++ V+SW+++I G A HG  E+AL  F+ M  +G+ P+ V    IL AC+ + ++E G+
Sbjct: 307 EERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGR 366

Query: 458 QVHAVFLKSGG-CSSLSVDNSLVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMGC 513
           +  A   +  G    +     +V ++++ G + +A+    +M    + + W AL+ GC
Sbjct: 367 KYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGC 424



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 181/409 (44%), Gaps = 55/409 (13%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS 109
           GEI  A ++F+KM  RD  TWN MIA     G    A KLF E P +N  +W+S+I GY+
Sbjct: 162 GEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYA 221

Query: 110 NYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAF 169
             G   EA +LF +M+  G  P++ T+  VL  C+  G L  G + H ++ ++ ++ N  
Sbjct: 222 QCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIR 281

Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
           V   L+DMY KC C+ +A  +F    + +  V+W+ MI G + +G    A+  F  M   
Sbjct: 282 VCNTLIDMYVKCGCLEDACRIFDNMEE-RTVVSWSAMIAGLAAHGRAEDALALFNKMINT 340

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDS 288
           GV+ N  TF  IL AC+ +   + G +    +    G    +     ++D++++ G L  
Sbjct: 341 GVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQE 400

Query: 289 ARRLLEYSEI-DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFA 347
           A   +    I  N V W +++ G               K+H                   
Sbjct: 401 AHEFIMNMPIAPNGVVWGALLGGC--------------KVH------------------- 427

Query: 348 SNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV---IS 404
            NI L    + H   +    +GY  V   L ++YA+ G  +    V  LM+D+ V     
Sbjct: 428 KNIKLAEEATRHLSKLDPLNDGYYVV---LSNIYAEAGRWEDVARVRKLMRDRGVKKTPG 484

Query: 405 WTS-LITGCAY--------HGSYEEAL----KYFSDMRISGICPDHVVV 440
           W+S ++ G  Y        H   EE      K    M++ G  P+  VV
Sbjct: 485 WSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKGYVPNTSVV 533



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 191/431 (44%), Gaps = 39/431 (9%)

Query: 34  KPASDLNRALVDFSNSGEIDEA-GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE 92
           +P++ L   L +F++  E+ +    L +  S       + + +  A +     AK +F  
Sbjct: 16  RPSTHL---LHNFTSPFELKQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQL 72

Query: 93  TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
                   W++ +  ++      +A  LF++++     P  YT   VL+ CS    ++ G
Sbjct: 73  LDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNG 132

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD---------------- 196
           +  HGY  K     N F+   +V +YA C  I  A  +F   P                 
Sbjct: 133 KIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKM 192

Query: 197 --------------GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
                          +N  +WT+MI GY+Q G   +AI+ F +M   G+  N+ T  ++L
Sbjct: 193 GDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVL 252

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
            ACA +     G ++H     SG+E N+ V + LIDMY KCG L+ A R+ +  E    V
Sbjct: 253 VACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVV 312

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSL 361
           SW++MI G A  G  ++AL+LF KM    +K +  T+  +L+ C    +     K   S+
Sbjct: 313 SWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASM 372

Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSY-- 418
               G          ++D++++ G L  A   + N+    + + W +L+ GC  H +   
Sbjct: 373 TRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKL 432

Query: 419 -EEALKYFSDM 428
            EEA ++ S +
Sbjct: 433 AEEATRHLSKL 443



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 137/313 (43%), Gaps = 36/313 (11%)

Query: 342 VLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
           +L+ F S  +L   K +H+ ++KT         + +  + A   +   A ++F L+   +
Sbjct: 21  LLHNFTSPFEL---KQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASE 77

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
           V  W + +   A   S  +A+  F  +R   I PDH   S +L AC+ L  +  G+ VH 
Sbjct: 78  VTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHG 137

Query: 462 VFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT---------------- 505
              K G  S++ + N +V +YA CG I  A +VFD M  RDVIT                
Sbjct: 138 YVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEG 197

Query: 506 ---------------WTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
                          WT++I G AQ GK KEA+  + +M   G  P+ +T V +L AC+ 
Sbjct: 198 AYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACAD 257

Query: 551 AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
            G     R   +  ++  G +        +ID+  + G L +A  + D M  E     W 
Sbjct: 258 MGNLVLGRRIHDFSNR-SGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNM-EERTVVSWS 315

Query: 611 ALLSACRVHGDLE 623
           A+++    HG  E
Sbjct: 316 AMIAGLAAHGRAE 328


>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
          Length = 650

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 226/621 (36%), Positives = 354/621 (57%), Gaps = 33/621 (5%)

Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
           E F+  R+  + +N   F   + +C    +   G Q+H  ++ SGF ++ ++ + L+ MY
Sbjct: 31  EAFQRFRL-NIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMY 89

Query: 281 AKCGDLDSA-------------------------------RRLLEYSEIDNEVSWNSMIV 309
           +K GD  SA                               R++ +        +WN+MI 
Sbjct: 90  SKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIA 149

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           G  +  F++E LSLF++MH      D++T  SV +  A    ++  + +H   +K G E 
Sbjct: 150 GLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLEL 209

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
              VN++L  MY + G L    +V   M  +++++W +LI G A +G  E  L  +  M+
Sbjct: 210 DLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMK 269

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
           ISG  P+ +   ++LS+C++L +   GQQ+HA  +K G  S ++V +SL+ +Y+KCGC+ 
Sbjct: 270 ISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLG 329

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR-GTKPDYITFVGLLFAC 548
           DA + F      D + W+++I     +G+G EA++ ++ M  +   + + + F+ LL+AC
Sbjct: 330 DAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYAC 389

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           SH+GL +     F+ M + YG KPG  HY C++DLLGR+G L +A+A++  M  + D  +
Sbjct: 390 SHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVI 449

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           WK LLSAC +H + E+ +R    + +++P ++  YV L+N++++A +W D + VRK M+ 
Sbjct: 450 WKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRD 509

Query: 669 RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHN 728
           + ++KE G SW E   +VH F   DR      +IYS + E+ L +K  GY PD    LH+
Sbjct: 510 KNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHD 569

Query: 729 VEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHII 788
           ++EE KE  L  HSEKLAVAF L+ LP+GAPIRI KNLRVC DCH A KYIS +  R I 
Sbjct: 570 MDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREIT 629

Query: 789 LRDSNRFHHFKAGNCSCGDYW 809
           LRD +RFHHF  G CSCGDYW
Sbjct: 630 LRDGSRFHHFINGKCSCGDYW 650



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 202/392 (51%), Gaps = 4/392 (1%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  +S  G+   A  ++ +M  ++  + N +I  Y  +G L  A+K+F+E P +   
Sbjct: 83  NHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLT 142

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           TW+++I G   +  + E   LF +M   G+ P +YTL +V    +    +  G+Q HGY 
Sbjct: 143 TWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYT 202

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           IK   +L+  V + L  MY +   + + E + +  P  +N VAW T+I G +QNG     
Sbjct: 203 IKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMP-VRNLVAWNTLIMGNAQNGCPETV 261

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           +  ++ M++ G   N+ TF ++L++C+ ++ R  G Q+H   +  G  + V V S+LI M
Sbjct: 262 LYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISM 321

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR-DIKIDDFT 338
           Y+KCG L  A +     E ++EV W+SMI  +   G   EA+ LF  M  + +++I++  
Sbjct: 322 YSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVA 381

Query: 339 YPSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           + ++L  C  S +     +    ++ K GF+        ++D+  + G LD A  +   M
Sbjct: 382 FLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSM 441

Query: 398 QDK-DVISWTSLITGCAYHGSYEEALKYFSDM 428
             K D++ W +L++ C  H + E A + F ++
Sbjct: 442 PIKTDIVIWKTLLSACNIHKNAEMAQRVFKEI 473



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 109/462 (23%), Positives = 213/462 (46%), Gaps = 8/462 (1%)

Query: 72  TMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRP 131
           T IA   + G LREA + F    F N   ++  I   +         +L   + + G+  
Sbjct: 18  TAIATLCSKGNLREAFQRFRLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSS 77

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
            ++  ++++ + S  G        +G   K  +  +  ++ G    Y +   +  A  +F
Sbjct: 78  DKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILING----YVRAGDLVNARKVF 133

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
              PD K    W  MI G  Q  +  + +  FR+M   G   +++T  S+ +  A + + 
Sbjct: 134 DEMPDRK-LTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSV 192

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
             G Q+HG  +  G E ++ V S+L  MY + G L     ++    + N V+WN++I+G 
Sbjct: 193 SIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGN 252

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
           A+ G  +  L L+K M     + +  T+ +VL+  +        + +H+  +K G     
Sbjct: 253 AQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVV 312

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM-RI 430
            V ++LI MY+K G L  A   F+  +D+D + W+S+I+   +HG  +EA++ F+ M   
Sbjct: 313 AVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQ 372

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFL-KSGGCSSLSVDNSLVLVYAKCGCIN 489
           + +  + V   ++L AC+   + + G ++  + + K G    L     +V +  + GC++
Sbjct: 373 TNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLD 432

Query: 490 DANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQML 530
            A  +  SM  + D++ W  L+  C  +   + A + + ++L
Sbjct: 433 QAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEIL 474


>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 649

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 223/575 (38%), Positives = 349/575 (60%), Gaps = 7/575 (1%)

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           IL+A    S  D    VH  ++  GF+ + ++ + LI+M+++   +D+AR++ + +    
Sbjct: 76  ILSAARRNSLSD-ALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRT 134

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNID---LNNAK 356
              WN++    A  G   + L L+ +M+   +  D FTY  +L  C AS      L   K
Sbjct: 135 IYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGK 194

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H+ I++ G+  +  V   L+DMYA+ G +  A  VF+ M  K+V+SW+++I   A +G
Sbjct: 195 EIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNG 254

Query: 417 SYEEALKYFSDMRIS--GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
              EAL+ F +M ++     P+ V + S+L ACA    LE G+ +HA  L+ G  S L V
Sbjct: 255 KPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPV 314

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
            ++L+ +YA+CG +     +FD MH +DV+ W +LI     +G G++A++ +++M+  G 
Sbjct: 315 ISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGF 374

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAK 594
            P +I+F+ +L ACSH GL E  +  FESM K +GI+P  +HYACM+DLLGR+ +L EA 
Sbjct: 375 SPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAA 434

Query: 595 ALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAG 654
            +++ +  EP   VW +LL ACR+H  +EL ERA+  LF+LEP NA  YV L+++Y+ A 
Sbjct: 435 KIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAE 494

Query: 655 KWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIK 714
            W++  RV+KL+ SR ++K PG SW+E   +++ F S D  +P    +++ +  +   +K
Sbjct: 495 MWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMK 554

Query: 715 EAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHT 774
           + GY P     L+++++E KE  +  HSEKLAVAFGL+   +G  IRI KNLR+C DCH+
Sbjct: 555 QRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHS 614

Query: 775 AMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
             K+IS    R I++RD NRFHHFK G CSCGDYW
Sbjct: 615 VTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 649



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 204/415 (49%), Gaps = 29/415 (6%)

Query: 15  CRSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMI 74
           C   I+  AR      NS+  A D+++ LVD    G  D+           D F    +I
Sbjct: 72  CELLILSAARR-----NSLSDALDVHQLLVD----GGFDQ-----------DPFLATKLI 111

Query: 75  AAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQY 134
             ++    +  A+K+F++T  +  + W++L    +  G   +  EL+ +M + G    ++
Sbjct: 112 NMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRF 171

Query: 135 TLDNVLRLC----SLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           T   +L+ C     L   LQ+G++ H + ++  +  +  V+T L+DMYA+  C+  A  +
Sbjct: 172 TYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAV 231

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES--NQFTFPSILTACAAV 248
           F   P  KN V+W+ MI  Y++NG  ++A+E FR+M +   +S  N  T  S+L ACAA 
Sbjct: 232 FDEMP-VKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAF 290

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
           +A + G  +H  IL  G ++ + V SALI MYA+CG L+S + + +     + V WNS+I
Sbjct: 291 AALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLI 350

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGF 367
             +   G+ ++A+ +F++M          ++ SVL  C  + +     K   S++ + G 
Sbjct: 351 SSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGI 410

Query: 368 EGYKFVNNALIDMYAKQGNLD-CAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           +        ++D+  +   LD  A ++ +L  +     W SL+  C  H   E A
Sbjct: 411 QPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELA 465



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 167/355 (47%), Gaps = 51/355 (14%)

Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
           LI    K G+L  A  LL +     + +   +I+  AR+                     
Sbjct: 44  LIQSLCKQGNLKQALYLLSHESNPTQQTCELLILSAARRN-------------------- 83

Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
                           L++A  VH L+V  GF+   F+   LI+M+++   +D A  VF+
Sbjct: 84  ---------------SLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFD 128

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAE----LT 451
             + + +  W +L    A  G   + L+ +  M + G+  D    + +L AC      ++
Sbjct: 129 KTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVS 188

Query: 452 VLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIM 511
            L+ G+++HA  L+ G  + + V  +L+ +YA+ GC++ A+ VFD M  ++V++W+A+I 
Sbjct: 189 FLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIA 248

Query: 512 GCAQNGKGKEALQFYDQML--ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG 569
             A+NGK  EAL+ + +M+     + P+ +T V +L AC+     E  +     +   Y 
Sbjct: 249 CYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGK-----LIHAYI 303

Query: 570 IKPGPDH----YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
           ++ G D      + +I +  R GKL   + + D+M  + D  +W +L+S+  +HG
Sbjct: 304 LRRGLDSILPVISALITMYARCGKLESGQLIFDRM-HKKDVVLWNSLISSYGLHG 357


>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
          Length = 814

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 248/754 (32%), Positives = 412/754 (54%), Gaps = 42/754 (5%)

Query: 18  KIIGPARYTHN--VGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMI 74
           K + P +  H   +    KP   +   L+  +    ++  A ++F+ M  RD  +WN M+
Sbjct: 56  KALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAML 115

Query: 75  AAYANSGRLREAKKLFNETP-----------FK--------NFFTWSSLIYGYS---NYG 112
             YA  G +  A+KLF+  P           F+        +  T++ ++   S   ++G
Sbjct: 116 FGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHG 175

Query: 113 LDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE---------------QFHG 157
             I+   L  +M  +    +   L ++   C ++    RG                Q HG
Sbjct: 176 GGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHG 235

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFE-AEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
           +A+KT F  +  + T  +DMY KC  + + +  LF   P+  N  ++  +I GY+++  G
Sbjct: 236 HALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPN-HNLQSYNAIIVGYARSDKG 294

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
            +A+  FR ++  G+  ++ +      ACA +     G QVHG  + S  ++N+ V +A+
Sbjct: 295 IEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAI 354

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           +DMY KCG L  A  + E     + VSWN++I    + G  ++ LSLF  M    ++ D+
Sbjct: 355 LDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDE 414

Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
           FTY SVL   A    LN    +H+ I+K+      FV  ALIDMY+K G ++ A  + + 
Sbjct: 415 FTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDR 474

Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
           + ++ V+SW ++I+G +     EEA K FS M   G+ PD+   ++IL  CA L  +E G
Sbjct: 475 LAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELG 534

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQN 516
           +Q+HA  +K    S   + ++LV +Y+KCG + D   +F+    RD +TW A++ G AQ+
Sbjct: 535 KQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQH 594

Query: 517 GKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH 576
           G G+EAL+ ++ M     KP++ TF+ +L AC H GL E    YF SM   YG+ P  +H
Sbjct: 595 GLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEH 654

Query: 577 YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELE 636
           Y+C++D++GRSG++ +A  L++ M  E DA +W+ LLS C++HG++E+ E+AA ++ +LE
Sbjct: 655 YSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLE 714

Query: 637 PMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGH 696
           P ++  YV LSN+Y+ AG W +  ++RK+M+  G++KEPGCSW+E  S+VH F+  D+ H
Sbjct: 715 PEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAH 774

Query: 697 PLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVE 730
           P   +IY  +D +   +K  GY+PD +F L++ E
Sbjct: 775 PRSKEIYENLDVLTDEMKWVGYMPDTDFILNDDE 808



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 155/588 (26%), Positives = 257/588 (43%), Gaps = 92/588 (15%)

Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
           T  ++ + CS +  L  G+Q H   I T F    FV   L+ MY KC  +  A  +F   
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGM 103

Query: 195 PDGKNHVAWTTMITGYS--------------QNGYGFKAIECFRDMRVE--GVESNQFTF 238
           P  ++ V+W  M+ GY+                G G   +E F D R+   G   ++ TF
Sbjct: 104 PQ-RDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELF-DFRMGRMGTVFDRTTF 161

Query: 239 PSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC--------------- 283
             +L +C+++     G Q+HG  +  GF+ +V   SAL+DMYAKC               
Sbjct: 162 AVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFK 221

Query: 284 -----------------------------GDLDSARRLLEYSEIDNEV----------SW 304
                                          LD   +    S+  N++          S+
Sbjct: 222 EMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSY 281

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIV 363
           N++IVG+AR     EAL +F+ +    + +D+ +       C     DL   + VH L +
Sbjct: 282 NAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQ-VHGLSM 340

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K+  +    V NA++DMY K G L  A +VF  M  +D +SW ++I     +G+ E+ L 
Sbjct: 341 KSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLS 400

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            F  M  SG+ PD     S+L ACA    L  G ++H   +KS       V  +L+ +Y+
Sbjct: 401 LFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYS 460

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG +  A ++ D +  + V++W A+I G +   + +EA + + +ML  G  PD  T+  
Sbjct: 461 KCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYAT 520

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHY--ACMIDLLGRSGKLIEAKALLDQMV 601
           +L  C++    E  +     + K    +   D Y  + ++D+  + G + + + + ++  
Sbjct: 521 ILDTCANLVTVELGKQIHAQIIKK---ELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAP 577

Query: 602 GEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNM 649
              D   W A++     HG   LGE A   +FE        Y+QL N+
Sbjct: 578 NR-DFVTWNAMVCGYAQHG---LGEEAL-KIFE--------YMQLENV 612



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 125/483 (25%), Positives = 210/483 (43%), Gaps = 85/483 (17%)

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
           +   + + TF  I   C+   A   G Q H  ++ + F+  V+V + LI MY KC DL  
Sbjct: 36  QATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGF 95

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD---IKIDDF-------- 337
           A ++ +     + VSWN+M+ G+A +G    A  LF  M       +++ DF        
Sbjct: 96  AFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTV 155

Query: 338 ----TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK--------QG 385
               T+  VL   +S  D      +H L VK GF+      +AL+DMYAK        +G
Sbjct: 156 FDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRG 215

Query: 386 NLD----------------------------------------------CAFMVFNLMQD 399
            L+                                              C+  +FN + +
Sbjct: 216 GLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPN 275

Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
            ++ S+ ++I G A      EAL  F  ++ SG+  D V +S    ACA +     G QV
Sbjct: 276 HNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQV 335

Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKG 519
           H + +KS   S++ V N+++ +Y KCG + +A  VF+ M +RD ++W A+I    QNG  
Sbjct: 336 HGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNE 395

Query: 520 KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWY-----FESMDKVYGIKPGP 574
           ++ L  +  ML  G +PD  T+  +L AC        A W       E  +++   + G 
Sbjct: 396 EKTLSLFVWMLQSGMEPDEFTYGSVLKAC--------AGWQALNCGMEIHNRIIKSRMGL 447

Query: 575 DHYA--CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNL 632
           D +    +ID+  + G + +A+ L D++  E     W A++S   +    E  ++  + +
Sbjct: 448 DSFVGIALIDMYSKCGMMEKAEKLHDRL-AEQTVVSWNAIISGFSLQKQSEEAQKTFSKM 506

Query: 633 FEL 635
            E+
Sbjct: 507 LEM 509


>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Cucumis sativus]
 gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Cucumis sativus]
          Length = 712

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 265/740 (35%), Positives = 397/740 (53%), Gaps = 82/740 (11%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N +++ +  +GR+ EA+ LFN+        ++ +I GY++ G   +A +LF++M ++   
Sbjct: 54  NYLLSFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALKLFYEMPVK--- 110

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
                 D +     LKG L+            C DL     T   +M+ K          
Sbjct: 111 ------DLISWNSMLKGCLK------------CGDL-----TMACNMFDKM--------- 138

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIEC-FRDMRVEGVESNQFTFPSILTACAAVS 249
                  +N V+WTT+I G  + G   +  EC FR M  + V +                
Sbjct: 139 -----SERNVVSWTTIINGLLEFGR-VEVAECLFRVMPTKDVTA---------------- 176

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
              + + VHG      F +N              G ++ A  L E     N +SW S+I 
Sbjct: 177 ---WNSMVHG------FFSN--------------GRVEDAIELFEKMPNRNVISWTSVIG 213

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           G    G   EAL +F KM A   K    T    L   A+         +H LIVKTG+  
Sbjct: 214 GLDHNGRSFEALVVFHKMLA-SFKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCF 272

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
            ++++ +LI  YA    +D A  +FN    ++V+ WT+L+TG   +  + +AL+ F  M 
Sbjct: 273 NEYISASLISFYANCKLIDNASSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMM 332

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
              + P+   ++S L++C  L  ++ G++VHAV  K G  S + V NSLV++Y KCG IN
Sbjct: 333 RMSVLPNQSSLTSALNSCCGLEAVDRGREVHAVAHKLGLESDIFVSNSLVVMYTKCGHIN 392

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
           D   VF  M  ++V++W ++I+GCAQ+G G+ AL  + QM+     PD IT  GLL AC 
Sbjct: 393 DGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLSACG 452

Query: 550 HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
           H+G+    R +F+   K +GI+   +HY+ M+DLLGR G+L EA+AL+  M G+ +  VW
Sbjct: 453 HSGMLTKGRCFFKHFGKNFGIEMTNEHYSSMVDLLGRYGQLEEAEALIHIMPGKANYMVW 512

Query: 610 KALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
            ALLS+   H ++ + ERAA  + +L+P  +  Y  LSN+Y++ GKW + +++RK MK  
Sbjct: 513 LALLSSSINHSNVHVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSKIRKKMKDE 572

Query: 670 GIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNV 729
           GI K+PG SW+      H FIS D+ HPL   IY K++ +   +KE GYVPD  F+ H+V
Sbjct: 573 GILKQPGSSWITIKGIKHNFISGDQSHPLSRKIYQKLEWLGGKLKELGYVPDPKFSFHDV 632

Query: 730 EEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIIL 789
           E E KE  L+YHSE+LA+ FGL++  +G+ I + KNLR+CGDCH A+K  S V  R I++
Sbjct: 633 ETEQKEEMLSYHSERLAIGFGLISTVEGSTIIVMKNLRICGDCHNAVKLTSKVVGREIVV 692

Query: 790 RDSNRFHHFKAGNCSCGDYW 809
           RD +RFHHF  G CSCGDYW
Sbjct: 693 RDPSRFHHFHNGTCSCGDYW 712



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 229/464 (49%), Gaps = 12/464 (2%)

Query: 49  SGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY 108
           +G IDEA  LF KMS      +  MI  YA+ GRL +A KLF E P K+  +W+S++ G 
Sbjct: 63  NGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALKLFYEMPVKDLISWNSMLKGC 122

Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA 168
              G    A  +F +M           ++ +L      G ++  E    + +    D+ A
Sbjct: 123 LKCGDLTMACNMFDKMSERNVVSWTTIINGLLEF----GRVEVAECL--FRVMPTKDVTA 176

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
           +    +V  +     + +A  LF+  P+ +N ++WT++I G   NG  F+A+  F  M +
Sbjct: 177 W--NSMVHGFFSNGRVEDAIELFEKMPN-RNVISWTSVIGGLDHNGRSFEALVVFHKM-L 232

Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
              ++   T    LTACA +     G Q+HG I+ +G+  N Y+ ++LI  YA C  +D+
Sbjct: 233 ASFKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCKLIDN 292

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
           A  +   +   N V W +++ G+     H +AL +FK M    +  +  +  S LN    
Sbjct: 293 ASSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSCCG 352

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
              ++  + VH++  K G E   FV+N+L+ MY K G+++    VF  M  K+V+SW S+
Sbjct: 353 LEAVDRGREVHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWNSI 412

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
           I GCA HG    AL  F+ M  + + PD + ++ +LSAC    +L  G+     F K+ G
Sbjct: 413 IVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLSACGHSGMLTKGRCFFKHFGKNFG 472

Query: 469 CSSLSVD-NSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALI 510
               +   +S+V +  + G + +A  +   M  + + + W AL+
Sbjct: 473 IEMTNEHYSSMVDLLGRYGQLEEAEALIHIMPGKANYMVWLALL 516



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 200/434 (46%), Gaps = 41/434 (9%)

Query: 35  PASDL---NRALVDFSNSGEIDEAGQLFEKMSDR-------------------------- 65
           P  DL   N  L      G++  A  +F+KMS+R                          
Sbjct: 108 PVKDLISWNSMLKGCLKCGDLTMACNMFDKMSERNVVSWTTIINGLLEFGRVEVAECLFR 167

Query: 66  -----DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFEL 120
                D   WN+M+  + ++GR+ +A +LF + P +N  +W+S+I G  + G   EA  +
Sbjct: 168 VMPTKDVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVV 227

Query: 121 FWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK 180
           F +M L  ++ +  TL   L  C+       G Q HG  +KT +  N ++   L+  YA 
Sbjct: 228 FHKM-LASFKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYAN 286

Query: 181 CKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
           CK I  A  +F      +N V WT ++TGY  N     A++ F+ M    V  NQ +  S
Sbjct: 287 CKLIDNASSIFND-NVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTS 345

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
            L +C  + A D G +VH      G E++++V ++L+ MY KCG ++    +       N
Sbjct: 346 ALNSCCGLEAVDRGREVHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKN 405

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
            VSWNS+IVG A+ GF + AL+LF +M    +  D+ T   +L+    +  L   +    
Sbjct: 406 VVSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLSACGHSGMLTKGRCFFK 465

Query: 361 LIVKT-GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYHGSY 418
              K  G E      ++++D+  + G L+ A  + ++M  K + + W +L++    H + 
Sbjct: 466 HFGKNFGIEMTNEHYSSMVDLLGRYGQLEEAEALIHIMPGKANYMVWLALLSSSINHSNV 525

Query: 419 ---EEALKYFSDMR 429
              E A K   D++
Sbjct: 526 HVAERAAKCVLDLQ 539



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 24/200 (12%)

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
           +N L+  + + G +D A  +FN M    V  +T +I G A  G  E+ALK F +M +  +
Sbjct: 53  SNYLLSFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALKLFYEMPVKDL 112

Query: 434 ------------CPDHVVVSSILSACAELTV----------LEFGQ-QVHAVFLKSGGCS 470
                       C D  +  ++    +E  V          LEFG+ +V     +     
Sbjct: 113 ISWNSMLKGCLKCGDLTMACNMFDKMSERNVVSWTTIINGLLEFGRVEVAECLFRVMPTK 172

Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
            ++  NS+V  +   G + DA  +F+ M  R+VI+WT++I G   NG+  EAL  + +ML
Sbjct: 173 DVTAWNSMVHGFFSNGRVEDAIELFEKMPNRNVISWTSVIGGLDHNGRSFEALVVFHKML 232

Query: 531 ARGTKPDYITFVGLLFACSH 550
           A   K    T    L AC++
Sbjct: 233 A-SFKATSSTLACALTACAN 251


>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
 gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 606

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 223/576 (38%), Positives = 349/576 (60%), Gaps = 9/576 (1%)

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
           ++L AC A+       Q+H  IL  G   N  V +    + +     D A   L  +E D
Sbjct: 34  ALLQACNALPKL---TQIHTHILKLGLHNNPLVLTKFASISSLIHATDYAASFLFSAEAD 90

Query: 300 NEVS----WNSMIVGFARQGFHKE-ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
             +     +N++I  +A+ G  K+ AL+L+  M    I  + FTYP VL   A    LN 
Sbjct: 91  TRLYDAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLNL 150

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAK-QGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
            ++VH  +VK GF+    V N ++ MY+   G ++ A  VF+ M   D ++W+++I G A
Sbjct: 151 GQTVHGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYA 210

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
             G   EA+  F +M+++ +CPD + + S+LSAC +L  LE G+ + A   +      + 
Sbjct: 211 RVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVE 270

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
           V N+L+ ++AKCG I+ A ++F +M+ + +++WT++I+G A +G+G+EA   +++M + G
Sbjct: 271 VSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSG 330

Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
             PD + F+GLL ACSH+GL E  R YF SM K Y + P  +HY CM+D+  R+G + EA
Sbjct: 331 VAPDDVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEA 390

Query: 594 KALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTA 653
              +  M  EP+  + + L+SACR HG+ +LGE+    L + EP++   YV LSN+Y+  
Sbjct: 391 LEFVRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMKHEPLHESNYVLLSNIYAKT 450

Query: 654 GKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLI 713
             WE   ++R++M+ +G++K PG + +E +++++ F++ D+ H    +IY  +DE+   +
Sbjct: 451 LSWEKKTKIREVMEVKGMKKVPGSTMIEIDNEIYEFVAGDKSHKQHKEIYEMVDEMGREM 510

Query: 714 KEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCH 773
           K++GY P  +  L ++ EE KE  L  HSEKLA+AFGLL  P G PIRI KNLRVC DCH
Sbjct: 511 KKSGYRPSTSEVLLDINEEDKEDSLNRHSEKLAIAFGLLRTPPGTPIRIVKNLRVCSDCH 570

Query: 774 TAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +A K+IS +Y R II+RD NRFHHFK+G CSCGD+W
Sbjct: 571 SASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW 606



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 166/343 (48%), Gaps = 27/343 (7%)

Query: 92  ETPFKNFFTWSSLIYGYSNYGLDIE-AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQ 150
           +T   + F +++LI  Y+  G   + A  L+  M  +   P+++T   VL+ C+   +L 
Sbjct: 90  DTRLYDAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEVLN 149

Query: 151 RGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC-IFEAEYLFKMFPDGKNHVAWTTMITG 209
            G+  HG  +K  FD +  V   +V MY+ C   I  A  +F   P   + V W+ MI G
Sbjct: 150 LGQTVHGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKS-DSVTWSAMIGG 208

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
           Y++ G   +A+  FR+M++  V  ++ T  S+L+AC  + A + G  +   I        
Sbjct: 209 YARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKP 268

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA 329
           V V +ALIDM+AKCGD+  A +L         VSW S+IVG A  G  +EA  LF++M +
Sbjct: 269 VEVSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTS 328

Query: 330 RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE-------GYKFVNN-----AL 377
             +  DD  +  +L+  +           HS +V+ G E        YK V        +
Sbjct: 329 SGVAPDDVAFIGLLSACS-----------HSGLVERGREYFGSMMKKYKLVPKIEHYGCM 377

Query: 378 IDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYE 419
           +DMY + G +  A   V N+  + + +   +L++ C  HG ++
Sbjct: 378 VDMYCRTGLVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFK 420



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 122/248 (49%), Gaps = 4/248 (1%)

Query: 64  DRDGFTWNTMIAAYAN-SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFW 122
           D D    NTM+  Y+  +G +  A+K+F+E P  +  TWS++I GY+  G   EA  LF 
Sbjct: 164 DCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIGGYARVGRSTEAVALFR 223

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           +MQ+    P + T+ ++L  C+  G L+ G+    Y  +        V   L+DM+AKC 
Sbjct: 224 EMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHKPVEVSNALIDMFAKCG 283

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
            I +A  LF+   + K  V+WT++I G + +G G +A   F +M   GV  +   F  +L
Sbjct: 284 DISKALKLFRAM-NEKTIVSWTSVIVGMAMHGRGQEATCLFEEMTSSGVAPDDVAFIGLL 342

Query: 243 TACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-N 300
           +AC+     + G +  G ++        +     ++DMY + G +  A   +    I+ N
Sbjct: 343 SACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTGLVKEALEFVRNMPIEPN 402

Query: 301 EVSWNSMI 308
            V   +++
Sbjct: 403 PVILRTLV 410


>gi|356503769|ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Glycine max]
          Length = 874

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 274/791 (34%), Positives = 409/791 (51%), Gaps = 50/791 (6%)

Query: 61  KMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFEL 120
           K  + D    N +I+ Y        A +LF   P  N  ++++LI   S +     A  L
Sbjct: 92  KRDEEDTHLSNALISTYLKLNLFPHALRLFLSLPSPNVVSYTTLISFLSKHRQH-HALHL 150

Query: 121 FWQMQLEGY-RPSQYTLDNVLRLCS-LKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMY 178
           F +M    +  P++YT   VL  CS L      G Q H  A+KT    + FV   LV +Y
Sbjct: 151 FLRMTTRSHLPPNEYTYVAVLTACSSLLHHFHFGLQLHAAALKTAHFDSPFVANALVSLY 210

Query: 179 AKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR-VEGVESNQFT 237
           AK      A  LF   P  ++  +W T+I+   Q+     A   FR+M+  +    + FT
Sbjct: 211 AKHASFHAALKLFNQIPR-RDIASWNTIISAALQDSLYDTAFRLFRNMQATDAFRVDDFT 269

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE--- 294
              +LTA A++     G QVH   +  G E ++ V + LI  Y+K G++D    L E   
Sbjct: 270 LSILLTASASLME---GQQVHAHAVKLGLETDLNVGNGLIGFYSKFGNVDDVEWLFEGMR 326

Query: 295 ------YSEI----------------------DNEVSWNSMIVGFAR--QGFHKEALSLF 324
                 ++E+                       N VS+N+++ GF R  QGF  EA+ LF
Sbjct: 327 VRDVITWTEMVTAYMEFGLVNLALKVFDEMPEKNSVSYNTVLAGFCRNEQGF--EAMRLF 384

Query: 325 KKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
            +M    +++ DF+  SV++      D   +K VH   VK GF    +V  AL+DMY + 
Sbjct: 385 VRMVEEGLELTDFSLTSVVDACGLLGDYKVSKQVHGFAVKFGFGSNGYVEAALLDMYTRC 444

Query: 385 GNLDCA---FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG-ICPDHVVV 440
           G +  A   F+ + L +   V+ WT++I G A +G  EEA+  F   R  G +  D V  
Sbjct: 445 GRMVDAGKMFLRWELEEFSSVV-WTAMICGYARNGQPEEAIYLFHVGRSDGKVIMDEVAA 503

Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT 500
           +S+L  C  +  L+ G+Q+H   +K G   +L V N++V +Y KCG ++DA +VF  M  
Sbjct: 504 ASMLGLCGTIGHLDMGKQIHCHVIKCGLGFNLEVGNAVVSMYFKCGSVDDAMKVFGDMPC 563

Query: 501 RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC--SHAGLAENAR 558
            D++TW  LI G   + +G  AL+ + +ML  G KP+ +TFV ++ A   ++  L ++ R
Sbjct: 564 TDIVTWNTLISGNLMHRQGDRALEIWVEMLGEGIKPNQVTFVLIISAYRQTNLNLVDDCR 623

Query: 559 WYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRV 618
             F SM  VY I+P   HYA  I +LG  G L EA   ++ M  +P A VW+ LL  CR+
Sbjct: 624 NLFNSMRTVYQIEPTSRHYASFISVLGHWGLLQEALETINNMPFQPSALVWRVLLDGCRL 683

Query: 619 HGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCS 678
           H +  +G+ AA N+  LEP +   ++ +SN+YS +G+W+ +  VR+ M+ +G RK P  S
Sbjct: 684 HKNELIGKWAAQNILALEPKDPSTFILVSNLYSASGRWDRSEMVREDMREKGFRKHPAQS 743

Query: 679 WVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGL 738
           W+    +++ F   DR HP   DI   ++ ++L   + GY PD +F LH VEE  K+I L
Sbjct: 744 WIVCEKKINSFYPRDRSHPQEKDIQRGLEILILECLKIGYEPDTSFVLHEVEEHHKKIFL 803

Query: 739 AYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHF 798
            +HS KLA  +G+L    G PIRI KN+ +CGDCH  +KY S V  R I LRDS+ FH F
Sbjct: 804 FHHSAKLAATYGILMTKPGKPIRIVKNILLCGDCHAFLKYASIVTKRDIFLRDSSGFHCF 863

Query: 799 KAGNCSCGDYW 809
             G CSC D W
Sbjct: 864 SNGQCSCKDCW 874



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 209/430 (48%), Gaps = 24/430 (5%)

Query: 2   FKLDFKILNFSLRCRSKII-GPARYTHNVGNSVKPASDLNRALVDF-SNSGEIDEAGQLF 59
           F++D   L+  L   + ++ G   + H V   ++   ++   L+ F S  G +D+   LF
Sbjct: 263 FRVDDFTLSILLTASASLMEGQQVHAHAVKLGLETDLNVGNGLIGFYSKFGNVDDVEWLF 322

Query: 60  EKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFE 119
           E M  RD  TW  M+ AY   G +  A K+F+E P KN  ++++++ G+       EA  
Sbjct: 323 EGMRVRDVITWTEMVTAYMEFGLVNLALKVFDEMPEKNSVSYNTVLAGFCRNEQGFEAMR 382

Query: 120 LFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYA 179
           LF +M  EG   + ++L +V+  C L G  +  +Q HG+A+K  F  N +V   L+DMY 
Sbjct: 383 LFVRMVEEGLELTDFSLTSVVDACGLLGDYKVSKQVHGFAVKFGFGSNGYVEAALLDMYT 442

Query: 180 KCKCIFEAEYLFKMFP-DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFT 237
           +C  + +A  +F  +  +  + V WT MI GY++NG   +AI  F   R +G V  ++  
Sbjct: 443 RCGRMVDAGKMFLRWELEEFSSVVWTAMICGYARNGQPEEAIYLFHVGRSDGKVIMDEVA 502

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
             S+L  C  +   D G Q+H  ++  G   N+ V +A++ MY KCG +D A ++     
Sbjct: 503 AASMLGLCGTIGHLDMGKQIHCHVIKCGLGFNLEVGNAVVSMYFKCGSVDDAMKVFGDMP 562

Query: 298 IDNEVSWNSMIVG--FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCF-ASNIDL-- 352
             + V+WN++I G    RQG    AL ++ +M    IK +  T+  +++ +  +N++L  
Sbjct: 563 CTDIVTWNTLISGNLMHRQG--DRALEIWVEMLGEGIKPNQVTFVLIISAYRQTNLNLVD 620

Query: 353 ------NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISW 405
                 N+ ++V+ +      E       + I +    G L  A    N M      + W
Sbjct: 621 DCRNLFNSMRTVYQI------EPTSRHYASFISVLGHWGLLQEALETINNMPFQPSALVW 674

Query: 406 TSLITGCAYH 415
             L+ GC  H
Sbjct: 675 RVLLDGCRLH 684



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 201/432 (46%), Gaps = 42/432 (9%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           P  ++L + L + S  G     +  H   +K   + +  +   L+  Y K      A  L
Sbjct: 62  PESHSLLHALHVSSRSGDTHLAKTVHATLLKRD-EEDTHLSNALISTYLKLNLFPHALRL 120

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACAAVS 249
           F   P   N V++TT+I+  S++     A+  F  M     +  N++T+ ++LTAC+++ 
Sbjct: 121 FLSLP-SPNVVSYTTLISFLSKH-RQHHALHLFLRMTTRSHLPPNEYTYVAVLTACSSLL 178

Query: 250 AR-DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
               FG Q+H   L +    + +V +AL+ +YAK     +A +L       +  SWN++I
Sbjct: 179 HHFHFGLQLHAAALKTAHFDSPFVANALVSLYAKHASFHAALKLFNQIPRRDIASWNTII 238

Query: 309 VGFARQGFHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
               +   +  A  LF+ M A D  ++DDFT   +L   AS   L   + VH+  VK G 
Sbjct: 239 SAALQDSLYDTAFRLFRNMQATDAFRVDDFTLSILLTASAS---LMEGQQVHAHAVKLGL 295

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
           E    V N LI  Y+K GN+D    +F  M+ +DVI+WT ++T     G    ALK F +
Sbjct: 296 ETDLNVGNGLIGFYSKFGNVDDVEWLFEGMRVRDVITWTEMVTAYMEFGLVNLALKVFDE 355

Query: 428 MR----------ISGICPDH---------------------VVVSSILSACAELTVLEFG 456
           M           ++G C +                        ++S++ AC  L   +  
Sbjct: 356 MPEKNSVSYNTVLAGFCRNEQGFEAMRLFVRMVEEGLELTDFSLTSVVDACGLLGDYKVS 415

Query: 457 QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDV--ITWTALIMGCA 514
           +QVH   +K G  S+  V+ +L+ +Y +CG + DA ++F      +   + WTA+I G A
Sbjct: 416 KQVHGFAVKFGFGSNGYVEAALLDMYTRCGRMVDAGKMFLRWELEEFSSVVWTAMICGYA 475

Query: 515 QNGKGKEALQFY 526
           +NG+ +EA+  +
Sbjct: 476 RNGQPEEAIYLF 487



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 187/408 (45%), Gaps = 53/408 (12%)

Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
           VH  +L    E + ++ +ALI  Y K      A RL       N VS+ ++I   ++   
Sbjct: 86  VHATLLKRD-EEDTHLSNALISTYLKLNLFPHALRLFLSLPSPNVVSYTTLISFLSKHRQ 144

Query: 317 HKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNID-LNNAKSVHSLIVKTGFEGYKFVN 374
           H  AL LF +M  R  +  +++TY +VL   +S +   +    +H+  +KT      FV 
Sbjct: 145 H-HALHLFLRMTTRSHLPPNEYTYVAVLTACSSLLHHFHFGLQLHAAALKTAHFDSPFVA 203

Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS-GI 433
           NAL+ +YAK  +   A  +FN +  +D+ SW ++I+       Y+ A + F +M+ +   
Sbjct: 204 NALVSLYAKHASFHAALKLFNQIPRRDIASWNTIISAALQDSLYDTAFRLFRNMQATDAF 263

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
             D   +S +L+A A L     GQQVHA  +K G  + L+V N L+  Y+K G ++D   
Sbjct: 264 RVDDFTLSILLTASASLME---GQQVHAHAVKLGLETDLNVGNGLIGFYSKFGNVDDVEW 320

Query: 494 VFDSMHTRDVITWTALIM-------------------------------GCAQNGKGKEA 522
           +F+ M  RDVITWT ++                                G  +N +G EA
Sbjct: 321 LFEGMRVRDVITWTEMVTAYMEFGLVNLALKVFDEMPEKNSVSYNTVLAGFCRNEQGFEA 380

Query: 523 LQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKP----GPDHY- 577
           ++ + +M+  G +    +   ++ AC   G        ++   +V+G       G + Y 
Sbjct: 381 MRLFVRMVEEGLELTDFSLTSVVDACGLLG-------DYKVSKQVHGFAVKFGFGSNGYV 433

Query: 578 -ACMIDLLGRSGKLIEA-KALLDQMVGEPDATVWKALLSACRVHGDLE 623
            A ++D+  R G++++A K  L   + E  + VW A++     +G  E
Sbjct: 434 EAALLDMYTRCGRMVDAGKMFLRWELEEFSSVVWTAMICGYARNGQPE 481



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 4/183 (2%)

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
           D + AK+VH+ ++K   E    ++NALI  Y K      A  +F  +   +V+S+T+LI+
Sbjct: 79  DTHLAKTVHATLLKRDEED-THLSNALISTYLKLNLFPHALRLFLSLPSPNVVSYTTLIS 137

Query: 411 GCAYHGSYEEALKYFSDMRI-SGICPDHVVVSSILSACAELTV-LEFGQQVHAVFLKSGG 468
             + H  +  AL  F  M   S + P+     ++L+AC+ L     FG Q+HA  LK+  
Sbjct: 138 FLSKHRQHH-ALHLFLRMTTRSHLPPNEYTYVAVLTACSSLLHHFHFGLQLHAAALKTAH 196

Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
             S  V N+LV +YAK    + A ++F+ +  RD+ +W  +I    Q+     A + +  
Sbjct: 197 FDSPFVANALVSLYAKHASFHAALKLFNQIPRRDIASWNTIISAALQDSLYDTAFRLFRN 256

Query: 529 MLA 531
           M A
Sbjct: 257 MQA 259


>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
          Length = 649

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 242/623 (38%), Positives = 348/623 (55%), Gaps = 32/623 (5%)

Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID 278
           A+  +  M   G   + +TFP +L A A  S+      VH  ++  G   N +V ++L+ 
Sbjct: 27  AVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLVT 86

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
            YA  GD  +AR LL   E D  V WN++I G  R     EA   F  M          T
Sbjct: 87  AYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVT 146

Query: 339 YPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           Y SVL+ C     D+     VH  +V +G      V NAL+DMYA+  +++ A+ +F+ M
Sbjct: 147 YVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGM 206

Query: 398 QDKDVISWTSLITGCAYHGS-------------------------------YEEALKYFS 426
           Q + V+SWTSL++G    G                                + EAL+ F 
Sbjct: 207 QVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFR 266

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
           +M+ S +  D   + S+++ACA+L  LE G+ V     + G      V N+L+ +Y+KCG
Sbjct: 267 EMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCG 326

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
            I  A  VF  MH RD  TWTA+I+G A NG G+EA++ + +M+     PD +TF+G+L 
Sbjct: 327 SIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLT 386

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           AC+HAGL +  R +F SM + Y I P   HY C+IDL GR+GK+ EA   +DQM   P++
Sbjct: 387 ACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNS 446

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
           T+W  LL+ACRVHG+ E+GE     L +++P N+  Y  LSN+Y+   +WED  R+R  +
Sbjct: 447 TIWGTLLAACRVHGNSEIGELVTERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTI 506

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFAL 726
             +GI+KEPGCS +E N  +H F++ D+ HP+  +IY K++ I+  +   GY PD+    
Sbjct: 507 MEKGIKKEPGCSLIEMNGIIHEFVAGDQSHPMSKEIYCKLESIINDLNNVGYFPDVTEVF 566

Query: 727 HNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRH 786
             V EE K+  L +HSEKLA+AF LL+      IRI KNLR+C DCH A+K IS +Y R 
Sbjct: 567 VEVAEEEKQKVLFWHSEKLAIAFALLSSEPNTVIRIVKNLRMCLDCHNAIKLISRLYGRE 626

Query: 787 IILRDSNRFHHFKAGNCSCGDYW 809
           +++RD  RFHHF+ G CSC DYW
Sbjct: 627 VVVRDRTRFHHFRHGFCSCKDYW 649



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 201/449 (44%), Gaps = 35/449 (7%)

Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
           +A   + +M   G  P  YT   +L+  +           H + +K     NA V T LV
Sbjct: 26  DAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLV 85

Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
             YA       A  L     +    V W  +I+G+++     +A   F DM   G     
Sbjct: 86  TAYAAGGDGAAARALLSE-RERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTP 144

Query: 236 FTFPSILTACAAVSARDF-GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
            T+ S+L+AC   +     G QVHG ++ SG   ++ V++AL+DMYA+C D++SA +L +
Sbjct: 145 VTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFD 204

Query: 295 YSEIDNEVSWNSMIVGFARQG-------------------------------FHKEALSL 323
             ++ + VSW S++ G  R G                                 +EAL +
Sbjct: 205 GMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEM 264

Query: 324 FKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK 383
           F++M   ++  D+FT  SV+   A    L   + V   + + G +   FV NALIDMY+K
Sbjct: 265 FREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSK 324

Query: 384 QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSI 443
            G+++ A  VF  M  +D  +WT++I G A +G  EEA++ F  M      PD V    +
Sbjct: 325 CGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGV 384

Query: 444 LSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL-VYAKCGCINDANRVFDSMH-TR 501
           L+AC    +++ G++      ++   +   V    ++ ++ + G I +A    D M  T 
Sbjct: 385 LTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTP 444

Query: 502 DVITWTALIMGCAQNGKGKEALQFYDQML 530
           +   W  L+  C  +G  +      +++L
Sbjct: 445 NSTIWGTLLAACRVHGNSEIGELVTERLL 473



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 144/293 (49%), Gaps = 4/293 (1%)

Query: 19  IIGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAY 77
           ++G   +   VG+ V P   +  ALVD ++   +++ A +LF+ M  R   +W ++++  
Sbjct: 162 LLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGL 221

Query: 78  ANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLD 137
              GR+ EA+ LF   P ++  +W+++I GY       EA E+F +MQ       ++T+ 
Sbjct: 222 TRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMV 281

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           +V+  C+  G L+ GE    Y  +    ++AFV   L+DMY+KC  I  A  +FK     
Sbjct: 282 SVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDM-HH 340

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           ++   WT +I G + NGYG +AIE F  M       ++ TF  +LTAC      D G + 
Sbjct: 341 RDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREF 400

Query: 258 HGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI-DNEVSWNSMI 308
              +  +     NV     +ID++ + G +  A   ++   +  N   W +++
Sbjct: 401 FLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLL 453



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 175/402 (43%), Gaps = 59/402 (14%)

Query: 89  LFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSL-KG 147
           L +E        W++LI G++      EA   F  M   G  P+  T  +VL  C    G
Sbjct: 100 LLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTG 159

Query: 148 LLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK------------------------- 182
            +  G Q HG  + +    +  V   LVDMYA+C                          
Sbjct: 160 DVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLS 219

Query: 183 ------CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
                  + EA  LF   P+ ++ V+WT MI GY Q     +A+E FR+M+   V +++F
Sbjct: 220 GLTRLGRVDEARDLFGRMPE-RDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEF 278

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           T  S++TACA + A + G  V   +   G + + +V +ALIDMY+KCG ++ A  + +  
Sbjct: 279 TMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDM 338

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
              ++ +W ++I+G A  G+ +EA+ +F +M       D+ T+  VL             
Sbjct: 339 HHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTA----------- 387

Query: 357 SVHSLIVKTG-------FEGYKFVNNA-----LIDMYAKQGNLDCAFMVFNLM-QDKDVI 403
             H+ +V  G        E Y    N      +ID++ + G +  A    + M    +  
Sbjct: 388 CTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNST 447

Query: 404 SWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
            W +L+  C  HG+ E  +      R+  + P++  V ++LS
Sbjct: 448 IWGTLLAACRVHGNSE--IGELVTERLLQMDPENSTVYTLLS 487



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 156/368 (42%), Gaps = 54/368 (14%)

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQ---GFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
           ARRLLE               G  R+      ++A++ + +M AR    D +T+P +L  
Sbjct: 8   ARRLLE---------------GIPRRCLVAAREDAVAGYARMLARGAMPDAYTFPPLLKA 52

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISW 405
            A        ++VH+ +VK G      V  +L+  YA  G+   A  + +  +    + W
Sbjct: 53  VARGSSAAPVRAVHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARALLSERERDTPVVW 112

Query: 406 TSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELT--VLEFGQQVHAVF 463
            +LI+G      + EA   F DM  +G  P  V   S+LSAC + T  VL  G QVH   
Sbjct: 113 NALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVL-LGMQVHGRV 171

Query: 464 LKSGGCSSLSVDNSLVLVYAKC-------------------------------GCINDAN 492
           + SG    L V+N+LV +YA+C                               G +++A 
Sbjct: 172 VGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEAR 231

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
            +F  M  RD ++WTA+I G  Q  + +EAL+ + +M       D  T V ++ AC+  G
Sbjct: 232 DLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLG 291

Query: 553 LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
             E   W    M +  GIK        +ID+  + G +  A  +   M    D   W A+
Sbjct: 292 ALEMGEWVRVYMSR-QGIKMDAFVGNALIDMYSKCGSIERALDVFKDM-HHRDKFTWTAI 349

Query: 613 LSACRVHG 620
           +    V+G
Sbjct: 350 ILGLAVNG 357



 Score = 43.9 bits (102), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 99/255 (38%), Gaps = 10/255 (3%)

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
            + E+A+  ++ M   G  PD      +L A A  +     + VHA  +K G   +  V 
Sbjct: 22  AAREDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVA 81

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
            SLV  YA  G    A  +         + W ALI G  +  +  EA   +  M   G  
Sbjct: 82  TSLVTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAA 141

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA--CMIDLLGRSGKLIEA 593
           P  +T+V +L AC       +     +   +V G    PD      ++D+      +  A
Sbjct: 142 PTPVTYVSVLSACGKG--TGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESA 199

Query: 594 KALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEP-MNAMPYVQLSNMYST 652
             L D M        W +LLS     G ++     A +LF   P  + + +  + + Y  
Sbjct: 200 WKLFDGMQVR-SVVSWTSLLSGLTRLGRVD----EARDLFGRMPERDTVSWTAMIDGYVQ 254

Query: 653 AGKWEDAARVRKLMK 667
           A ++ +A  + + M+
Sbjct: 255 AARFREALEMFREMQ 269


>gi|356495756|ref|XP_003516739.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g71420-like [Glycine max]
          Length = 782

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 253/701 (36%), Positives = 375/701 (53%), Gaps = 30/701 (4%)

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT--CFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           S  T  ++   C+ K  LQ G   H Y +        + F+   +++MY KC  +  A Y
Sbjct: 89  SLQTYASLFHACAQKKCLQHGMTLHHYVLHKDPTIQNDVFLTNHIINMYCKCGHLAYARY 148

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +F      +N V+WT +I+G++Q+G   +    F  + +     N+F F S+L+AC    
Sbjct: 149 VFDQMSH-RNIVSWTALISGHAQSGLVRECFSLFSGL-LAHFRPNEFAFASLLSACEEHD 206

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDL--------DSARRLLEYSEIDNE 301
            +  G QVH   L    +ANVYV ++LI MY+K            D A  + +  E  N 
Sbjct: 207 IK-CGMQVHAVALKISLDANVYVANSLITMYSKRSGFGGGYAQTPDDAWTMFKSMEFRNL 265

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS-------NIDLNN 354
           VSWNSMI  F  +G   +A+ LF  M+   I  D  T  SV +           N  L  
Sbjct: 266 VSWNSMIAXFQLRGLGDKAICLFAHMYCNGIGFDRATLLSVFSSLNECGAFDVINTYLRK 325

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN--LDCAFMVFNLMQDKDVISWTSLITGC 412
              +H L +K+G      V  ALI  YA  G    DC  +  +     D++SWT+LI+  
Sbjct: 326 CFQLHCLTIKSGLISEIEVVTALIKSYANLGGHISDCYRIFHDTSSQLDIVSWTALISVF 385

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
           A     E+A   F  +      PD    S  L ACA     +    +H+  +K G     
Sbjct: 386 AERDP-EQAFLLFCQLHRQSYLPDWYTFSIALKACAYFVTEQHAMAIHSQVIKKGFQEDT 444

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
            + N+L+  YA+CG +  + +VF+ M   D+++W +++   A +G+ K+AL+ + QM   
Sbjct: 445 VLCNALMHAYARCGSLALSEQVFNEMGCHDLVSWNSMLKSYAIHGQAKDALELFQQM--- 501

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIE 592
              PD  TFV LL ACSH GL +     F SM   +G+ P  DHY+CM+DL GR+GK+ E
Sbjct: 502 NVCPDSATFVALLSACSHVGLVDEGVKLFNSMSDDHGVVPQLDHYSCMVDLYGRAGKIFE 561

Query: 593 AKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYST 652
           A+ L+ +M  +PD+ +W +LL +CR HG+  L + AA+   ELEP N++ YVQ+SN+YS+
Sbjct: 562 AEELIRKMPMKPDSVIWSSLLGSCRKHGETRLAKLAADKFKELEPNNSLGYVQMSNIYSS 621

Query: 653 AGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLL 712
            G +  A  +R  M    +RKEPG SWVE   QVH F S  + HP R  I S+++ ++  
Sbjct: 622 GGSFTKAGLIRNEMSDFKVRKEPGLSWVEIGKQVHEFGSGGQYHPNRGAILSRLEIVIGQ 681

Query: 713 IKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLL---TLPQGA-PIRIFKNLRV 768
           +KE GYVP+++ AL++ E E KE  L +HSEK+A+ F ++   +LP G   I+I KN+R+
Sbjct: 682 LKEMGYVPELSLALYDTEVEHKEDQLFHHSEKMALVFAIMNEGSLPCGGNVIKIMKNIRI 741

Query: 769 CGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           C DCH  MK  S ++ + I++RDSNRFH FK   CSC DYW
Sbjct: 742 CVDCHNFMKLASYLFQKEIVVRDSNRFHRFKYATCSCNDYW 782



 Score =  185 bits (470), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 135/476 (28%), Positives = 238/476 (50%), Gaps = 26/476 (5%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  N +I  Y   G L  A+ +F++   +N  +W++LI G++  GL  E F LF  + 
Sbjct: 126 DVFLTNHIINMYCKCGHLAYARYVFDQMSHRNIVSWTALISGHAQSGLVRECFSLFSGL- 184

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK----- 180
           L  +RP+++   ++L  C  +  ++ G Q H  A+K   D N +V   L+ MY+K     
Sbjct: 185 LAHFRPNEFAFASLLSACE-EHDIKCGMQVHAVALKISLDANVYVANSLITMYSKRSGFG 243

Query: 181 ---CKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
               +   +A  +FK   + +N V+W +MI  +   G G KAI  F  M   G+  ++ T
Sbjct: 244 GGYAQTPDDAWTMFKSM-EFRNLVSWNSMIAXFQLRGLGDKAICLFAHMYCNGIGFDRAT 302

Query: 238 FPSILTACAAVSARDF-------GAQVHGCILSSGFEANVYVQSALIDMYAKCGD--LDS 288
             S+ ++     A D          Q+H   + SG  + + V +ALI  YA  G    D 
Sbjct: 303 LLSVFSSLNECGAFDVINTYLRKCFQLHCLTIKSGLISEIEVVTALIKSYANLGGHISDC 362

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
            R   + S   + VSW ++I  FA +   ++A  LF ++H +    D +T+   L   A 
Sbjct: 363 YRIFHDTSSQLDIVSWTALISVFAERD-PEQAFLLFCQLHRQSYLPDWYTFSIALKACAY 421

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
            +   +A ++HS ++K GF+    + NAL+  YA+ G+L  +  VFN M   D++SW S+
Sbjct: 422 FVTEQHAMAIHSQVIKKGFQEDTVLCNALMHAYARCGSLALSEQVFNEMGCHDLVSWNSM 481

Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV-HAVFLKSG 467
           +   A HG  ++AL+ F  M    +CPD     ++LSAC+ + +++ G ++ +++    G
Sbjct: 482 LKSYAIHGQAKDALELFQQM---NVCPDSATFVALLSACSHVGLVDEGVKLFNSMSDDHG 538

Query: 468 GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEA 522
               L   + +V +Y + G I +A  +   M  + D + W++L+  C ++G+ + A
Sbjct: 539 VVPQLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGETRLA 594



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 161/376 (42%), Gaps = 49/376 (13%)

Query: 53  DEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYG 112
           D+A  +F+ M  R+  +WN+MIA +    +LR                           G
Sbjct: 251 DDAWTMFKSMEFRNLVSWNSMIAXF----QLR---------------------------G 279

Query: 113 LDIEAFELFWQMQLEGYRPSQYTLDNV---LRLCS----LKGLLQRGEQFHGYAIKTCFD 165
           L  +A  LF  M   G    + TL +V   L  C     +   L++  Q H   IK+   
Sbjct: 280 LGDKAICLFAHMYCNGIGFDRATLLSVFSSLNECGAFDVINTYLRKCFQLHCLTIKSGLI 339

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNH---VAWTTMITGYSQNGYGFKAIEC 222
               VVT L+  YA         Y  ++F D  +    V+WT +I+ +++     +A   
Sbjct: 340 SEIEVVTALIKSYANLGGHISDCY--RIFHDTSSQLDIVSWTALISVFAERDPE-QAFLL 396

Query: 223 FRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK 282
           F  +  +    + +TF   L ACA          +H  ++  GF+ +  + +AL+  YA+
Sbjct: 397 FCQLHRQSYLPDWYTFSIALKACAYFVTEQHAMAIHSQVIKKGFQEDTVLCNALMHAYAR 456

Query: 283 CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
           CG L  + ++       + VSWNSM+  +A  G  K+AL LF++M   ++  D  T+ ++
Sbjct: 457 CGSLALSEQVFNEMGCHDLVSWNSMLKSYAIHGQAKDALELFQQM---NVCPDSATFVAL 513

Query: 343 LN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL-DCAFMVFNLMQDK 400
           L+ C    +     K  +S+    G        + ++D+Y + G + +   ++  +    
Sbjct: 514 LSACSHVGLVDEGVKLFNSMSDDHGVVPQLDHYSCMVDLYGRAGKIFEAEELIRKMPMKP 573

Query: 401 DVISWTSLITGCAYHG 416
           D + W+SL+  C  HG
Sbjct: 574 DSVIWSSLLGSCRKHG 589



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 38/176 (21%), Positives = 78/176 (44%), Gaps = 35/176 (19%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF-KNF 98
           N  +  ++  G +  + Q+F +M   D  +WN+M+ +YA  G+ ++A +LF +     + 
Sbjct: 448 NALMHAYARCGSLALSEQVFNEMGCHDLVSWNSMLKSYAIHGQAKDALELFQQMNVCPDS 507

Query: 99  FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
            T+ +L+   S+ GL  E  +LF  M  +                   G++ + + +   
Sbjct: 508 ATFVALLSACSHVGLVDEGVKLFNSMSDD------------------HGVVPQLDHY--- 546

Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
                        + +VD+Y +   IFEAE L +  P   + V W++++    ++G
Sbjct: 547 -------------SCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHG 589


>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 577

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 225/580 (38%), Positives = 339/580 (58%), Gaps = 9/580 (1%)

Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
           V  ++ +F  IL +CA       G   H  I+  GFE ++ +Q+ L+D YAK GDL  A+
Sbjct: 6   VLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAK 65

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
           R+       + V+ N+MI   ++ G+ +EA +LF  M  R+      ++ S++ C+    
Sbjct: 66  RVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERN----SCSWNSMITCYCKLG 121

Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM-QDKDVISWTSLI 409
           D+N+A+ +           +    NA+ID Y K   L  A  +F LM   ++ ++W ++I
Sbjct: 122 DINSARLMFDCNPVKDVVSW----NAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMI 177

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
           +     G +  A+  F  M+   + P  V + S+LSACA L  L+ G+ +H         
Sbjct: 178 SAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLK 237

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
             + + N+L+ +Y KCG +  A  VF  +  +++  W ++I+G   NG+G+EA+  +  M
Sbjct: 238 IDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVM 297

Query: 530 LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGK 589
              G KPD +TFVG+L  CSH+GL    + YF  M  VYG++PG +HY CM+DLLGR+G 
Sbjct: 298 EKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGY 357

Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNM 649
           L EA  L+  M  +P++ V  +LL AC++H D +LGE+    L EL+P +   YV LSN+
Sbjct: 358 LKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNL 417

Query: 650 YSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEI 709
           Y++  +W+D    RKLM  RG+ K PGCS +E N+ VH F++ D  HP  T I + +DEI
Sbjct: 418 YASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEI 477

Query: 710 MLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVC 769
              +K  G+VP+    LH++EEE KE  + YHSE++AVAFGL++ P G  IR+ KNLR C
Sbjct: 478 AKELKGQGHVPNTANVLHDIEEEEKEGAIRYHSERIAVAFGLMSTPPGKTIRVVKNLRTC 537

Query: 770 GDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            DCH+AMK IS  + R II+RD  RFHHF+ G+CSC DYW
Sbjct: 538 SDCHSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 577



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 193/403 (47%), Gaps = 12/403 (2%)

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
           PS+ +   +LR C++ G  Q GE FH   +K  F+ +  + TGL+D YAK   +  A+ +
Sbjct: 8   PSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRV 67

Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
           F   P  ++ VA   MI+  S++GY  +A   F +M     E N  ++ S++T    +  
Sbjct: 68  FMGMPR-RDVVANNAMISALSKHGYVEEARNLFDNM----TERNSCSWNSMITCYCKLGD 122

Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL-LEYSEIDNEVSWNSMIV 309
            +    +  C        +V   +A+ID Y K   L +A+ L L      N V+WN+MI 
Sbjct: 123 INSARLMFDC----NPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMIS 178

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
            + + G    A+S+F++M + ++K  + T  S+L+  A    L+  + +H  I     + 
Sbjct: 179 AYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKI 238

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
              + NALIDMY K G L+ A  VF+ +  K++  W S+I G   +G  EEA+  F  M 
Sbjct: 239 DVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVME 298

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAKCGCI 488
             GI PD V    ILS C+   +L  GQ+  +  L   G    +     +V +  + G +
Sbjct: 299 KEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYL 358

Query: 489 NDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQML 530
            +A  +  +M  + + +   +L+  C  +   K   Q   Q+L
Sbjct: 359 KEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLL 401



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 198/452 (43%), Gaps = 60/452 (13%)

Query: 39  LNRALVDF-SNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           L   L+DF +  G++  A ++F  M  RD    N MI+A +  G + EA+ LF+    +N
Sbjct: 47  LQTGLLDFYAKVGDLKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERN 106

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
             +W+S+I  Y   G DI +  L                                  F  
Sbjct: 107 SCSWNSMITCYCKLG-DINSARLM---------------------------------FDC 132

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
             +K     NA     ++D Y K K +  A+ LF +    +N V W TMI+ Y Q G   
Sbjct: 133 NPVKDVVSWNA-----IIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFG 187

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
            AI  F+ M+ E V+  + T  S+L+ACA + A D G  +HG I +   + +V + +ALI
Sbjct: 188 TAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALI 247

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
           DMY KCG L++A  +       N   WNS+IVG    G  +EA++ F  M    IK D  
Sbjct: 248 DMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGV 307

Query: 338 TYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
           T+  +L+ C  S +     +    ++   G E        ++D+  + G L  A  +   
Sbjct: 308 TFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRA 367

Query: 397 MQDK-DVISWTSLITGCAYHGSYEEALKYFSDMRISGICP--DHVVVSSI---------L 444
           M  K + +   SL+  C  H   +   +    +     C   ++V +S++         +
Sbjct: 368 MPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDV 427

Query: 445 SACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
           + C +L +    + VH    K+ GCSS+ V+N
Sbjct: 428 NTCRKLMI---KRGVH----KTPGCSSIEVNN 452



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 101/411 (24%), Positives = 156/411 (37%), Gaps = 108/411 (26%)

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
           M   D+     ++  +L   A + +    ++ H  I+K GFE    +   L+D YAK G+
Sbjct: 1   MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60

Query: 387 LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSA 446
           L CA  VF  M  +DV++  ++I+  + HG  EEA   F +M                  
Sbjct: 61  LKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMT----------------- 103

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITW 506
                             +   CS     NS++  Y K G IN A  +FD    +DV++W
Sbjct: 104 ------------------ERNSCSW----NSMITCYCKLGDINSARLMFDCNPVKDVVSW 141

Query: 507 TALI------------------MGCAQN--------------GKGKEALQFYDQMLARGT 534
            A+I                  MG A+N              G+   A+  + QM +   
Sbjct: 142 NAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQMQSENV 201

Query: 535 KPDYITFVGLLFACSHAGLAENARW---YFES----MDKVYG-------IKPGPDHYA-- 578
           KP  +T V LL AC+H G  +   W   Y  +    +D V G        K G    A  
Sbjct: 202 KPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAID 261

Query: 579 --------------CMIDLLGRSGKLIEAKALLDQMVGE---PDATVWKALLSACRVHGD 621
                          +I  LG +G+  EA A    M  E   PD   +  +LS C   G 
Sbjct: 262 VFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGL 321

Query: 622 LELGERAANNL---FELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
           L  G+R  + +   + LEP     Y  + ++   AG  ++A  + + M  +
Sbjct: 322 LSAGQRYFSEMLGVYGLEP-GVEHYGCMVDLLGRAGYLKEALELIRAMPMK 371


>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
 gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
          Length = 673

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 231/561 (41%), Positives = 344/561 (61%), Gaps = 8/561 (1%)

Query: 256 QVHGCILSSG-FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
           Q+H   L SG F ++ Y  SAL+ MY  C     ARR  +     N V   +M  G+ R 
Sbjct: 114 QLHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRN 173

Query: 315 GFHKEALSLFKKMHARDIK--IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
                +L LF+ M A D    +D+       +  A   D     S+H+LI K GFE    
Sbjct: 174 NLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAG 233

Query: 373 VNNALIDMYAKQG--NLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
           V N ++D YAK G  +L+ A  VF+ M+ +DV+SW S+I   A +G   EA+  +S M  
Sbjct: 234 VVNTMLDSYAKGGSRDLEVARKVFDTME-RDVVSWNSMIALYAQNGMSAEAIGLYSKMLN 292

Query: 431 --SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
              GI  + V +S++L ACA    ++ G+++H   ++ G   ++ V  S+V +Y+KCG +
Sbjct: 293 VGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRV 352

Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
             A+R F  +  +++++W+A+I G   +G+G+EAL+ + +M   G +P+YITF+ +L AC
Sbjct: 353 EMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAAC 412

Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           SHAGL +  R+++ +M + +GI+ G +HY CM+DLLGR+G L EA +L+ +M  +PDA +
Sbjct: 413 SHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAI 472

Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
           W ALLSACR+H ++EL E +   LFEL+  N+  YV LSN+Y+ A  W+D  R+R L+K+
Sbjct: 473 WGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEARMWKDVERIRLLVKT 532

Query: 669 RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHN 728
           R I K PG S  E   ++++F   D+ HP   +IYS +++++  ++EAGYVP+    LH+
Sbjct: 533 RRIEKPPGYSSFELKGKIYLFYVGDKSHPQHIEIYSYLEKLLERMQEAGYVPNTGSVLHD 592

Query: 729 VEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHII 788
           ++EE KE  L  HSEKLAVAF L+     + I I KNLRVC DCHTAMK+I+ +  R II
Sbjct: 593 LDEEEKESALRIHSEKLAVAFALMNSVPRSVIHIIKNLRVCSDCHTAMKFITKITEREII 652

Query: 789 LRDSNRFHHFKAGNCSCGDYW 809
           +RD  RFHHFK G CSC DYW
Sbjct: 653 IRDLQRFHHFKDGLCSCRDYW 673



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 177/370 (47%), Gaps = 22/370 (5%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D ++ + ++  Y +  R  +A++ F+E P  N    +++  GY    L   + ELF  M 
Sbjct: 128 DPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAMI 187

Query: 126 LEGYRPSQYTLDNVLRLCSLKG---LLQRG--EQFHGYAIKTCFDLNAFVVTGLVDMYAK 180
                 S   +D    L +      +  RG     H    K  F+ NA VV  ++D YAK
Sbjct: 188 ASD---SASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAK 244

Query: 181 CKCIFEAEYLFKMFPD-GKNHVAWTTMITGYSQNGYGFKAIECFRDMRV--EGVESNQFT 237
                + E   K+F    ++ V+W +MI  Y+QNG   +AI  +  M     G++ N   
Sbjct: 245 GGS-RDLEVARKVFDTMERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVA 303

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
             ++L ACA   A   G ++H  ++  G E NVYV ++++DMY+KCG ++ A R     +
Sbjct: 304 LSAVLLACAHAGAIQTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIK 363

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
             N +SW++MI G+   G  +EAL +F +M    ++ +  T+ SVL   +    L+  + 
Sbjct: 364 EKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRY 423

Query: 358 VHSLI-----VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITG 411
            ++ +     ++ G E Y      ++D+  + G LD A+ +   M+ K D   W +L++ 
Sbjct: 424 WYNAMKQEFGIEAGVEHY----GCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSA 479

Query: 412 CAYHGSYEEA 421
           C  H + E A
Sbjct: 480 CRIHKNVELA 489



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 92/190 (48%), Gaps = 10/190 (5%)

Query: 28  NVGNSVK-PASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWN-----TMIAAYANSG 81
           NVG  +K  A  L+  L+  +++G I + G+       R G   N     +++  Y+  G
Sbjct: 292 NVGGGIKCNAVALSAVLLACAHAGAI-QTGKRIHNQVVRMGLEENVYVGTSIVDMYSKCG 350

Query: 82  RLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLR 141
           R+  A + F +   KN  +WS++I GY  +G   EA E+F +M+  G RP+  T  +VL 
Sbjct: 351 RVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLA 410

Query: 142 LCSLKGLLQRGEQFHGYAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKN 199
            CS  GLL  G  ++  A+K  F + A V     +VD+  +  C+ EA  L K      +
Sbjct: 411 ACSHAGLLDEGRYWYN-AMKQEFGIEAGVEHYGCMVDLLGRAGCLDEAYSLIKEMKVKPD 469

Query: 200 HVAWTTMITG 209
              W  +++ 
Sbjct: 470 AAIWGALLSA 479


>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
           [Vitis vinifera]
          Length = 807

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 228/657 (34%), Positives = 369/657 (56%), Gaps = 5/657 (0%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GY 129
           N+++  Y   G + +A ++F + P  +  +W+++I G+        +   F  M  E G 
Sbjct: 148 NSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGI 207

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
            P++    + +  CS    L  G + HG  +K+  D+  ++V+ L++MY KC  I  AE 
Sbjct: 208 YPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAEN 267

Query: 190 LFKMFPDG----KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +F    D     +N V W  MI+GY  NG   +A+  F  M V G++ +  T  S+ + C
Sbjct: 268 IFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLC 327

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           +      FG Q+HG I   G + N+ V++AL+DMY KCGD+ +  ++   S+  N + W+
Sbjct: 328 SESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWS 387

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           ++I   A+ G   +AL LF +    D   D     +VL   +S         +H L  K 
Sbjct: 388 AVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKM 447

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           GF    FV +AL+D+YAK  ++  +  VF  +  KD++SW +LI+G A     +EALK F
Sbjct: 448 GFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALKAF 507

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
            DM++  I P+ V ++ ILS CA L+V+   ++VH   ++ G  S++ V NSL+  YAKC
Sbjct: 508 RDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKC 567

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G IN +   F+ M  R+ ++W ++I+G   + +  E +  +D+M+A G KPD++TF  +L
Sbjct: 568 GDINSSLYTFEKMPERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAIL 627

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
            ACSHAG  +    YF+SM + + +KP  + Y CM+DLLGR+G L +A  L+  M   PD
Sbjct: 628 SACSHAGRVDEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTPD 687

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
             +W +LL +C+ HGD  L E  AN++F+L P +    V L+N+Y   GK  + ++VR  
Sbjct: 688 DRIWGSLLGSCKNHGDEILAEIVANHIFKLVPSSVGYRVLLANLYENLGKGREGSKVRSE 747

Query: 666 MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDM 722
           +K  G++K+PGCSW+E ++  HIFI+ DR H    +IY+ ++ +   IK AGY+P +
Sbjct: 748 IKDMGLKKKPGCSWIEVDNNFHIFIAGDRSHSQSDEIYAAVESLTTEIKRAGYIPQI 804



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 164/593 (27%), Positives = 292/593 (49%), Gaps = 51/593 (8%)

Query: 93  TPFKNFFTWS---SLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL- 148
           T  + F + S   ++I  Y+  G   +A  ++ +M  +G +  ++     L + +  GL 
Sbjct: 65  TKIQTFVSVSFANNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCL-IKAFGGLC 123

Query: 149 -LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
            + +G Q HG+ +K     +  VV  L+ MY KC  + +A  +F+  P+  + V+W TMI
Sbjct: 124 DVYKGRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPE-VDLVSWNTMI 182

Query: 208 TGYSQNGYGFKAIECFRDMRVE-GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF 266
           +G+ ++    +++  FR M  E G+  N+    S + +C+++ +   G ++HG ++ SG 
Sbjct: 183 SGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGL 242

Query: 267 EANVYVQSALIDMYAKCGDLDSARRLLEYSEID------NEVSWNSMIVGFARQGFHKEA 320
           +   Y+ S+LI+MY KCG + +A  +   S +D      N V WN MI G+   G   +A
Sbjct: 243 DVEEYLVSSLIEMYMKCGSIKNAENIFN-SILDKDSVRRNAVIWNVMISGYVSNGCFSQA 301

Query: 321 LSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDM 380
           L LF KM    IK D  T  S+ +  + ++D+   K +H LI K G +    V  AL+DM
Sbjct: 302 LLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDM 361

Query: 381 YAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVV 440
           Y K G++     +F   Q+ ++I W+++I+ CA  G   +AL+ F + ++     D  ++
Sbjct: 362 YLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGIL 421

Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT 500
            ++L AC+ LT+   G Q+H +  K G  S + V ++LV +YAKC  +  + +VF  +  
Sbjct: 422 VAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQ 481

Query: 501 RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG---LAENA 557
           +D+++W ALI G AQ+    EAL+ +  M     +P+ +T   +L  C+H     L +  
Sbjct: 482 KDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEV 541

Query: 558 RWYF-----------------------ESMDKVYGIKPGPDH----YACMIDLLGRSGKL 590
             Y                        +    +Y  +  P+     +  +I  +G   + 
Sbjct: 542 HGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILGMGMHSRT 601

Query: 591 IEAKALLDQMVG---EPDATVWKALLSACRVHGDLELGERAANNL---FELEP 637
            E   L D+MV    +PD   + A+LSAC   G ++ G +   ++   F L+P
Sbjct: 602 DEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKP 654



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 111/229 (48%), Gaps = 2/229 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F  + ++  YA    +  +KK+F     K+  +W++LI GY+      EA + F  MQ
Sbjct: 452 DVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQ 511

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           LE  RP+  T+  +L +C+   ++   ++ HGY I+        V   L+  YAKC  I 
Sbjct: 512 LEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDIN 571

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            + Y F+  P+ +N V+W ++I G   +    + I  F  M   G++ +  TF +IL+AC
Sbjct: 572 SSLYTFEKMPE-RNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSAC 630

Query: 246 AAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLL 293
           +     D G +    ++     +  +   + ++D+  + G L+ A  L+
Sbjct: 631 SHAGRVDEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGRAGHLNQAYDLI 679


>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 692

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 230/577 (39%), Positives = 326/577 (56%), Gaps = 1/577 (0%)

Query: 234 NQFTFPSILTACAAVS-ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
           +  TFP  L + + +      G Q+H   L      N +V ++L+ +YA+CG L  A+R+
Sbjct: 116 SHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRV 175

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
            +     + VSW ++I  +   G  +EA+ + +   A  ++ D FT   VL   A   DL
Sbjct: 176 FDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADL 235

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
              ++V     + G     FV  A +D+Y K G +  A  VF+ M+DKD ++W +++ G 
Sbjct: 236 ATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGY 295

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
           A +G   EAL  F  M+  G+ PD   V+  LSAC  L  L+ G+Q   +        + 
Sbjct: 296 ASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNP 355

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
            +  +L+ +YAKCG   +A  VF  M  +D+I W A+I+G    G  K A     QM   
Sbjct: 356 VLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKS 415

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIE 592
           G K +  TF+GLL +C+H GL ++ R YF +M K+Y I P  +HY C++DLL R+G L E
Sbjct: 416 GVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQE 475

Query: 593 AKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYST 652
           A  L+D M    +A +  ALL  C++H + EL E     L  LEP N+  YV LSN+YS 
Sbjct: 476 AHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSN 535

Query: 653 AGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLL 712
            G+WEDAA++R  MK +G+ K P CSWVE   +VH F   D+ HPL   IY K+DE+ L 
Sbjct: 536 RGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLE 595

Query: 713 IKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDC 772
           +K  GY P     + +VE+E KE  L +HSEKLA+AF LL    G  IR+ KNLRVC DC
Sbjct: 596 MKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDC 655

Query: 773 HTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           HTA+K IS +  R II+RD+NRFH F+ G+CSC DYW
Sbjct: 656 HTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 692



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 188/403 (46%), Gaps = 4/403 (0%)

Query: 131 PSQYTLDNVLRLCS-LKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           PS  T    L+  S L   L+ GEQ H  ++K     N  V+T L+ +YA+C  +  A+ 
Sbjct: 115 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 174

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +F   P     V+WT +IT Y   G   +A+   R+    G+  + FT   +LTACA V+
Sbjct: 175 VFDEMPHPST-VSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVA 233

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
               G  V       G   +V+V +A +D+Y KCG++  AR + +     + V+W +M+ 
Sbjct: 234 DLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVG 293

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           G+A  G  +EAL LF  M A  ++ D +     L+       L+  +    ++    F  
Sbjct: 294 GYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLD 353

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
              +  ALIDMYAK G+   A++VF  M+ KD+I W ++I G    G  + A      M 
Sbjct: 354 NPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQME 413

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCI 488
            SG+  +      +L +C    +++ G++      K    S  +     +V + ++ G +
Sbjct: 414 KSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLL 473

Query: 489 NDANRVFDSMH-TRDVITWTALIMGCAQNGKGKEALQFYDQML 530
            +A+++ D M    + +   AL+ GC  +   + A     Q++
Sbjct: 474 QEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLI 516



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 195/423 (46%), Gaps = 18/423 (4%)

Query: 12  SLRCRSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWN 71
           +LR    +  P+  T  +  ++K AS L   L     +GE   A  L +  S  +     
Sbjct: 105 ALRLHCLLPNPSHLTFPI--ALKSASRLPHPL----RAGEQLHARSL-KLPSHTNPHVLT 157

Query: 72  TMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRP 131
           +++  YA  G L  A+++F+E P  +  +W++LI  Y + G   EA  +       G RP
Sbjct: 158 SLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRP 217

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
             +T   VL  C+    L  GE     A +     + FV T  VD+Y KC  + +A  +F
Sbjct: 218 DSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVF 277

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
               D K+ VAW  M+ GY+ NG+  +A++ F  M+ EGV  + +     L+AC  + A 
Sbjct: 278 DKMRD-KDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGAL 336

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
           D G Q    +    F  N  + +ALIDMYAKCG    A  + +     + + WN+MI+G 
Sbjct: 337 DLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGL 396

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLI----VKTG 366
              G  K A +L  +M    +K++D T+  +L +C  + +  +  +  H++     +   
Sbjct: 397 GMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPR 456

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLM-QDKDVISWTSLITGCAYHGSYEEALKYF 425
            E Y      ++D+ ++ G L  A  + + M    + +   +L+ GC  H + E A    
Sbjct: 457 IEHY----GCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVL 512

Query: 426 SDM 428
           + +
Sbjct: 513 TQL 515


>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
          Length = 665

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 230/577 (39%), Positives = 328/577 (56%), Gaps = 41/577 (7%)

Query: 274 SALIDMYAKCGDLDSARRLLEYSEID-----NEVSWNSMIVGFARQGFHKEALSLFKKMH 328
           SAL+  +A  GD + A RLLE    D     N ++WN ++ G  R G  ++A+     MH
Sbjct: 89  SALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVALATMH 148

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNN-AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL 387
              +   D T  S       ++ L +  + +H   VK G      V  ALIDMY K G  
Sbjct: 149 GEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQA 208

Query: 388 DCAFMVFNLMQDKDV-----------------------------------ISWTSLITGC 412
                VF+     DV                                   +SWTS++  C
Sbjct: 209 AEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACC 268

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
             +G   EA+++F +M+  G  P+ V +  +L A A +  L  G+  H   L+ G    +
Sbjct: 269 VQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDV 328

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
            V ++LV +YAKCG + DA  +FD+M +R+V++W A+I G A  G+   A+  +  ML  
Sbjct: 329 YVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKC 388

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIE 592
             KPD +TF  LL AC+ AGL E  R YF+ M   YG+ P  +HYACM+ LLGR+GKL E
Sbjct: 389 KQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDE 448

Query: 593 AKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYST 652
           A  L+  M  EPDA +W +LL +CRVHG+++L E AA  LF LEP NA  YV LSN+Y++
Sbjct: 449 AYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPENAGNYVLLSNIYAS 508

Query: 653 AGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLL 712
              W+   RVR++MK  G++KE GCSW+E  ++VH+ ++ D  HP+ T I  KI+++ + 
Sbjct: 509 KKMWDRVNRVREMMKDVGLKKEKGCSWIEIKNKVHMLLAGDDSHPMMTAIIEKINQLNIQ 568

Query: 713 IKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDC 772
           +++ G+VP  +F LH+VEE+ K+  LA HSEKLAVA GL++   G  +R+ KNLR+CGDC
Sbjct: 569 MRKLGFVPSTDFVLHDVEEQEKDDILAVHSEKLAVALGLISTSPGTTLRVIKNLRICGDC 628

Query: 773 HTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           H AMK+IS+   R I +RD+NRFHHF  G CSCGD+W
Sbjct: 629 HEAMKFISSFEGREISVRDTNRFHHFSGGKCSCGDFW 665



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 131/430 (30%), Positives = 189/430 (43%), Gaps = 47/430 (10%)

Query: 36  ASDLNRALVDFSNSGEIDEAGQLFEKMS--DRDGFTWNTMIAAYANSGRLREAKKLFNET 93
           AS L  A +    +G    A  LF+ M    R    W+ ++AA+A  G    A +L  E 
Sbjct: 55  ASSLLHAYLRLGTTGN---ARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEM 111

Query: 94  PF-----KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGY-RPSQYTLDNVLRLCSLKG 147
                   N  TW+ L+ G +  G   +A      M  EG  RP    +   L      G
Sbjct: 112 RRDGGVEPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVG 171

Query: 148 LLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC-------------------KC----- 183
           L+  G+Q HGYA+K     +A VVT L+DMY KC                    C     
Sbjct: 172 LVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIA 231

Query: 184 -------IFEAEYLFKMFPDGK---NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
                  + EA  LFK F D     N V+WT+++    QNG   +A+E FR+M+ +G E 
Sbjct: 232 GLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEP 291

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
           N  T P +L A A V+A   G   H   L  GF  +VYV SAL+DMYAKCG +  AR + 
Sbjct: 292 NSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIF 351

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDL 352
           +     N VSWN+MI G+A  G    A+ +F  M     K D  T+  +L  C  + +  
Sbjct: 352 DTMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTE 411

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITG 411
                   +  + G          ++ +  + G LD A+ ++ ++  + D   W SL+  
Sbjct: 412 EGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGS 471

Query: 412 CAYHGSYEEA 421
           C  HG+ + A
Sbjct: 472 CRVHGNVDLA 481



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 79/354 (22%), Positives = 147/354 (41%), Gaps = 84/354 (23%)

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ--DKDVI 403
           F S   L  A+++H++   +G     FV ++L+  Y + G    A  +F+ M    + V+
Sbjct: 27  FKSCPTLPLARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARALFDGMPRPQRTVV 86

Query: 404 SWTSLITGCAYHGSYEEALKYFSDMRISG------------------------------- 432
            W++L+   A  G  E A +   +MR  G                               
Sbjct: 87  GWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVALAT 146

Query: 433 ------ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
                 + PD   VS  LSA  ++ ++  GQQ+H   +K+G  +   V  +L+ +Y KCG
Sbjct: 147 MHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCG 206

Query: 487 CINDANRVFDSMHTRD-----------------------------------VITWTALIM 511
              +  RVFD     D                                   V++WT+++ 
Sbjct: 207 QAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVA 266

Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIK 571
            C QNGK  EA++F+ +M A+GT+P+ +T   +L A ++     + R         + ++
Sbjct: 267 CCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGR-----SAHCFALR 321

Query: 572 PGPDH----YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGD 621
            G  H     + ++D+  + G++ +A+ + D MV   +   W A++    ++G+
Sbjct: 322 KGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSR-NVVSWNAMIGGYAMYGE 374



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 8/174 (4%)

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
           +  +L +F  +R     PD  ++ +   +C     L   + +HAV   SG      V +S
Sbjct: 3   HSSSLHHF--LRHVSFPPDPHLLPTAFKSC---PTLPLARALHAVAEVSGLARDPFVASS 57

Query: 478 LVLVYAKCGCINDANRVFDSM--HTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR-GT 534
           L+  Y + G   +A  +FD M    R V+ W+AL+   A  G  + A +  ++M    G 
Sbjct: 58  LLHAYLRLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGV 117

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSG 588
           +P+ IT+ GL+   + +G A +A     +M     ++P     +C +  +G  G
Sbjct: 118 EPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVG 171


>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
 gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
 gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
 gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 857

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 228/691 (32%), Positives = 380/691 (54%), Gaps = 3/691 (0%)

Query: 39  LNRALVDFSNSGEIDEAGQLFEKMS-DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           L +A V   N   ID        +  D + F  +++I AY   G++    KLF+    K+
Sbjct: 144 LVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKD 203

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
              W+ ++ GY+  G      + F  M+++   P+  T D VL +C+ K L+  G Q HG
Sbjct: 204 CVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHG 263

Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
             + +  D    +   L+ MY+KC    +A  LF+M     + V W  MI+GY Q+G   
Sbjct: 264 LVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRA-DTVTWNCMISGYVQSGLME 322

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           +++  F +M   GV  +  TF S+L + +     ++  Q+H  I+      ++++ SALI
Sbjct: 323 ESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALI 382

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
           D Y KC  +  A+ +       + V + +MI G+   G + ++L +F+ +    I  ++ 
Sbjct: 383 DAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEI 442

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
           T  S+L      + L   + +H  I+K GF+    +  A+IDMYAK G ++ A+ +F  +
Sbjct: 443 TLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL 502

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
             +D++SW S+IT CA   +   A+  F  M +SGIC D V +S+ LSACA L    FG+
Sbjct: 503 SKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGK 562

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
            +H   +K    S +  +++L+ +YAKCG +  A  VF +M  +++++W ++I  C  +G
Sbjct: 563 AIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHG 622

Query: 518 KGKEALQFYDQMLAR-GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH 576
           K K++L  + +M+ + G +PD ITF+ ++ +C H G  +    +F SM + YGI+P  +H
Sbjct: 623 KLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEH 682

Query: 577 YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELE 636
           YAC++DL GR+G+L EA   +  M   PDA VW  LL ACR+H ++EL E A++ L +L+
Sbjct: 683 YACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLD 742

Query: 637 PMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGH 696
           P N+  YV +SN ++ A +WE   +VR LMK R ++K PG SW+E N + H+F+S D  H
Sbjct: 743 PSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNH 802

Query: 697 PLRTDIYSKIDEIMLLIKEAGYVPDMNFALH 727
           P  + IYS ++ ++  ++  GY+P     LH
Sbjct: 803 PESSHIYSLLNSLLGELRLEGYIPQPYLPLH 833



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/498 (25%), Positives = 244/498 (48%), Gaps = 17/498 (3%)

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           LE   P + +L  +L+ CS   LL++G+Q H + I      +++    ++ MYA C    
Sbjct: 30  LEETIPRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFS 87

Query: 186 EAEYLFKMFPDGKNHV-AWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
           +   +F      ++ +  W ++I+ + +NG   +A+  +  M   GV  +  TFP ++ A
Sbjct: 88  DCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKA 147

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           C A+        +   + S G + N +V S+LI  Y + G +D   +L +     + V W
Sbjct: 148 CVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIW 207

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N M+ G+A+ G     +  F  M    I  +  T+  VL+  AS + ++    +H L+V 
Sbjct: 208 NVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVV 267

Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
           +G +    + N+L+ MY+K G  D A  +F +M   D ++W  +I+G    G  EE+L +
Sbjct: 268 SGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTF 327

Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
           F +M  SG+ PD +  SS+L + ++   LE+ +Q+H   ++      + + ++L+  Y K
Sbjct: 328 FYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFK 387

Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
           C  ++ A  +F   ++ DV+ +TA+I G   NG   ++L+ +  ++     P+ IT V +
Sbjct: 388 CRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSI 447

Query: 545 LFACSHAGLAENARWYFESMDKVYG--IKPGPDHY----ACMIDLLGRSGKLIEAKALLD 598
           L         +  R       +++G  IK G D+       +ID+  + G++  A  + +
Sbjct: 448 LPVIGILLALKLGR-------ELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFE 500

Query: 599 QMVGEPDATVWKALLSAC 616
           ++  + D   W ++++ C
Sbjct: 501 RL-SKRDIVSWNSMITRC 517


>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
 gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
          Length = 680

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 245/640 (38%), Positives = 373/640 (58%), Gaps = 4/640 (0%)

Query: 56  GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
           G +F+   D D F  NT++  Y N G L++ K++F+E   ++  +W+S+I  +S +G   
Sbjct: 31  GVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEMLERDVVSWNSVIGVFSVHGFYA 90

Query: 116 EAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGL 174
           EA  LF +M L  G+RP+  ++ +VL +C+       G Q H Y +KT  D    V   L
Sbjct: 91  EAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNAL 150

Query: 175 VDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
           VD+Y KC  + ++  +F    + +N V+W  +IT  +       A+E FR M   GV+ N
Sbjct: 151 VDVYGKCGYVKDSRRVFDEISE-RNGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPN 209

Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE 294
             TF S+L     +   DFG ++HG  L  G E++++V +ALIDMYAK G    A  +  
Sbjct: 210 SVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFN 269

Query: 295 YSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
                N VSWN+M+  FA+      A+ L ++M A     +  T+ +VL   A    L  
Sbjct: 270 QIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRP 329

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
            K +H+  ++TG     FV+NAL DMYAK G L+ A  VF +   +D +S+  LI G + 
Sbjct: 330 GKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVFKI-SLRDEVSYNILIIGYSQ 388

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
             +  E+L+ F +M I G+  D V    ++SACA L  L+ G++VH + ++    + L +
Sbjct: 389 TTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFI 448

Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
            N+L+  Y KCG I+ A +VF  + +RD  +W ++I+G    G+   A+  ++ M   G 
Sbjct: 449 ANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGV 508

Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAK 594
           + D ++++ +L ACSH GL E  + YFE M +V  IKP   HYACM+DLLGR+G + EA 
Sbjct: 509 EYDSVSYIAVLSACSHGGLVEEGKKYFEHM-QVQNIKPTQMHYACMVDLLGRAGLIEEAV 567

Query: 595 ALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAG 654
            L++ +  EPDA VW ALL ACR+HG +EL   AA +LF+L+P ++  Y  LSNMY+ AG
Sbjct: 568 KLIESLPIEPDANVWGALLGACRIHGYIELAHWAAEHLFKLKPQHSGYYSVLSNMYAEAG 627

Query: 655 KWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDR 694
           KW++A +VRKLMKSRG +K PGCSWV+ ++QVH F++ +R
Sbjct: 628 KWDEANQVRKLMKSRGAKKNPGCSWVQIDNQVHAFVAGER 667



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 167/571 (29%), Positives = 287/571 (50%), Gaps = 39/571 (6%)

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G R   +T   VL+ C+    +Q+G + HG   K  FD + FV   L+  Y  C  + + 
Sbjct: 2   GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE-GVESNQFTFPSILTACA 246
           + +F    + ++ V+W ++I  +S +G+  +AI  F +M +  G   N  +  S+L  CA
Sbjct: 62  KRVFDEMLE-RDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCA 120

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
            +     G Q+H  ++ +G ++ V V +AL+D+Y KCG +  +RR+ +     N VSWN+
Sbjct: 121 GLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNA 180

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           +I   A    +++AL +F+ M    +K +  T+ S+L         +  K +H   ++ G
Sbjct: 181 IITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFG 240

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
            E   FV NALIDMYAK G    A  VFN + +K+++SW +++   A +     A+    
Sbjct: 241 LESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVR 300

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
            M+  G  P+ V  +++L ACA +  L  G+++HA  +++G    L V N+L  +YAKCG
Sbjct: 301 QMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCG 360

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
           C+N A RVF  +  RD +++  LI+G +Q     E+L+ + +M  +G K D ++++G++ 
Sbjct: 361 CLNLARRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVIS 419

Query: 547 ACSHA----------GLA-----------ENARWYF-------ESMDKVYGIKPGPD--H 576
           AC++           GLA            NA   F       +   KV+   P  D   
Sbjct: 420 ACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTAS 479

Query: 577 YACMIDLLGRSGKLIEAKALLDQMVG---EPDATVWKALLSACRVHGDLELGERAANNL- 632
           +  MI   G  G+L  A  L + M     E D+  + A+LSAC   G +E G++   ++ 
Sbjct: 480 WNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQ 539

Query: 633 -FELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
              ++P   M Y  + ++   AG  E+A ++
Sbjct: 540 VQNIKPTQ-MHYACMVDLLGRAGLIEEAVKL 569



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 18/204 (8%)

Query: 42  ALVDFS-NSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF-- 98
           AL+DF    G ID AG++F ++  RD  +WN+MI  Y   G L  A  LF          
Sbjct: 451 ALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEY 510

Query: 99  --FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF- 155
              ++ +++   S+ GL  E  + F  MQ++  +P+Q     ++ L    GL++   +  
Sbjct: 511 DSVSYIAVLSACSHGGLVEEGKKYFEHMQVQNIKPTQMHYACMVDLLGRAGLIEEAVKLI 570

Query: 156 HGYAIKTCFD-----LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
               I+   +     L A  + G +++       + AE+LFK+ P    +  ++ +   Y
Sbjct: 571 ESLPIEPDANVWGALLGACRIHGYIELAH-----WAAEHLFKLKPQHSGY--YSVLSNMY 623

Query: 211 SQNGYGFKAIECFRDMRVEGVESN 234
           ++ G   +A +  + M+  G + N
Sbjct: 624 AEAGKWDEANQVRKLMKSRGAKKN 647


>gi|242081959|ref|XP_002445748.1| hypothetical protein SORBIDRAFT_07g025050 [Sorghum bicolor]
 gi|241942098|gb|EES15243.1| hypothetical protein SORBIDRAFT_07g025050 [Sorghum bicolor]
          Length = 760

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 250/755 (33%), Positives = 393/755 (52%), Gaps = 18/755 (2%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N ++AAY      R A+ LF+  P ++  TW++LI GY+  G    A   F   + +
Sbjct: 11  FLSNNLLAAYVRCADTRSARLLFDGMPRRDVVTWNTLIAGYATQGSARSALGAFRDARRD 70

Query: 128 G-YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
           G     ++T   VL  C   G  + G   HG A+ +     AFV   ++DMYAKC+ I E
Sbjct: 71  GAVAVDRFTYAAVLAACGGAGDWRSGRAAHGLAVVSGLARTAFVSNSVIDMYAKCRMIDE 130

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
               F    + ++ V+W  +++ Y + G+   A      M   GVE + F    IL AC+
Sbjct: 131 VRLAFDR-AEERDEVSWNLLLSAYVRMGWPEVAANVLVWMHRSGVELDAFALGGILKACS 189

Query: 247 AVS-ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
            +  + D    +HGC++  G + +V+V S ++DMYAK G L+ A ++       N V +N
Sbjct: 190 ELEDSEDVRRMLHGCVIKVGLDLDVFVGSTMVDMYAKNGGLEEAIKVFGSIPSQNVVIYN 249

Query: 306 SMIVGFARQG------FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA---- 355
           +MI GFAR G         EA+ ++  M  R I+   FT+ SVL       +L NA    
Sbjct: 250 TMIAGFARLGNDPCPEIRMEAVRIYSNMFRRRIRPSKFTFKSVLEV----CNLTNAVRCW 305

Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
           + +H+ ++  GFE  +F+ NALI++Y+K   +D +   F+    +++ +WTS+IT    +
Sbjct: 306 RQIHAHVILFGFEDDEFIGNALINLYSKARLVDDSLRCFHRTPKQEIFTWTSMITAFVRN 365

Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
              ++AL  F  +R +G+ PD   +SS+++ACA+L++    +Q+H   +KSG        
Sbjct: 366 EHSDKALNLFKGLRYTGVEPDQFTMSSVMNACADLSMPIACEQIHCYAVKSGFDRFTLCG 425

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTK 535
           NS + +Y   G +  A + F+ + + D  +W+ +I+  A +G  +EAL  + +M      
Sbjct: 426 NSQIEMYRCTGDLKAAKKTFERIPSLDTFSWSQMILSYAVHGHEREALLLFKKMRDCSVI 485

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
            +   F+ +L ACSH GL +    ++ESM   Y   P   H ACM+DLLG  GK+ +A+ 
Sbjct: 486 INEFAFLAVLVACSHQGLIDEGFRHYESMVSDYSFVPDVKHIACMVDLLGHVGKVADAED 545

Query: 596 LLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGK 655
            ++    E D+ +W  LL ACR+HGD + G +    L  LEP  A  YV L N+Y  AGK
Sbjct: 546 FINSSGLENDSVLWHTLLRACRIHGDKDRGIKTGEKLMTLEPFAASSYVMLYNLYMDAGK 605

Query: 656 WEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKE 715
              A R R  M+ RG+ KE G SW E       F+  D     +   +++++E+++ +K+
Sbjct: 606 ISLAMRTRGQMRERGMTKESGVSWAEFGGSCQHFVDGDNSCSQKDATFTRLEELLVRVKQ 665

Query: 716 AGYVPDMN-FALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHT 774
                 MN + L     +  E  +  H E LAVA GL TLP  AP+R+ KN R+  + H 
Sbjct: 666 KTERSSMNVWELGFQNRKVSENSIGKHGELLAVALGLSTLPNTAPVRVMKNQRMSWEGHE 725

Query: 775 AMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
            +K +S    R II+RD  RFHHF  G+CSC  YW
Sbjct: 726 TLKLLSESENREIIIRDPTRFHHFSQGSCSCRGYW 760



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 126/476 (26%), Positives = 217/476 (45%), Gaps = 12/476 (2%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGL-DIEAFELFWQ 123
           R  F  N++I  YA    + E +  F+    ++  +W+ L+  Y   G  ++ A  L W 
Sbjct: 110 RTAFVSNSVIDMYAKCRMIDEVRLAFDRAEERDEVSWNLLLSAYVRMGWPEVAANVLVW- 168

Query: 124 MQLEGYRPSQYTLDNVLRLCS-LKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
           M   G     + L  +L+ CS L+         HG  IK   DL+ FV + +VDMYAK  
Sbjct: 169 MHRSGVELDAFALGGILKACSELEDSEDVRRMLHGCVIKVGLDLDVFVGSTMVDMYAKNG 228

Query: 183 CIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG------YGFKAIECFRDMRVEGVESNQF 236
            + EA  +F   P  +N V + TMI G+++ G         +A+  + +M    +  ++F
Sbjct: 229 GLEEAIKVFGSIP-SQNVVIYNTMIAGFARLGNDPCPEIRMEAVRIYSNMFRRRIRPSKF 287

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
           TF S+L  C   +A     Q+H  ++  GFE + ++ +ALI++Y+K   +D + R    +
Sbjct: 288 TFKSVLEVCNLTNAVRCWRQIHAHVILFGFEDDEFIGNALINLYSKARLVDDSLRCFHRT 347

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
                 +W SMI  F R     +AL+LFK +    ++ D FT  SV+N  A        +
Sbjct: 348 PKQEIFTWTSMITAFVRNEHSDKALNLFKGLRYTGVEPDQFTMSSVMNACADLSMPIACE 407

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H   VK+GF+ +    N+ I+MY   G+L  A   F  +   D  SW+ +I   A HG
Sbjct: 408 QIHCYAVKSGFDRFTLCGNSQIEMYRCTGDLKAAKKTFERIPSLDTFSWSQMILSYAVHG 467

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG-QQVHAVFLKSGGCSSLSVD 475
              EAL  F  MR   +  +     ++L AC+   +++ G +   ++         +   
Sbjct: 468 HEREALLLFKKMRDCSVIINEFAFLAVLVACSHQGLIDEGFRHYESMVSDYSFVPDVKHI 527

Query: 476 NSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQML 530
             +V +    G + DA    +S     D + W  L+  C  +G     ++  ++++
Sbjct: 528 ACMVDLLGHVGKVADAEDFINSSGLENDSVLWHTLLRACRIHGDKDRGIKTGEKLM 583



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 188/379 (49%), Gaps = 31/379 (8%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLD------IEA 117
           D D F  +TM+  YA +G L EA K+F   P +N   ++++I G++  G D      +EA
Sbjct: 211 DLDVFVGSTMVDMYAKNGGLEEAIKVFGSIPSQNVVIYNTMIAGFARLGNDPCPEIRMEA 270

Query: 118 FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
             ++  M     RPS++T  +VL +C+L   ++   Q H + I   F+ + F+   L+++
Sbjct: 271 VRIYSNMFRRRIRPSKFTFKSVLEVCNLTNAVRCWRQIHAHVILFGFEDDEFIGNALINL 330

Query: 178 YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
           Y+K + + ++   F   P  +    WT+MIT + +N +  KA+  F+ +R  GVE +QFT
Sbjct: 331 YSKARLVDDSLRCFHRTPK-QEIFTWTSMITAFVRNEHSDKALNLFKGLRYTGVEPDQFT 389

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
             S++ ACA +S      Q+H   + SGF+      ++ I+MY   GDL +A++  E   
Sbjct: 390 MSSVMNACADLSMPIACEQIHCYAVKSGFDRFTLCGNSQIEMYRCTGDLKAAKKTFERIP 449

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
             +  SW+ MI+ +A  G  +EAL LFKKM    + I++F + +VL              
Sbjct: 450 SLDTFSWSQMILSYAVHGHEREALLLFKKMRDCSVIINEFAFLAVL-----------VAC 498

Query: 358 VHSLIVKTGFEGYK-------FVNNA-----LIDMYAKQGNL-DCAFMVFNLMQDKDVIS 404
            H  ++  GF  Y+       FV +      ++D+    G + D    + +   + D + 
Sbjct: 499 SHQGLIDEGFRHYESMVSDYSFVPDVKHIACMVDLLGHVGKVADAEDFINSSGLENDSVL 558

Query: 405 WTSLITGCAYHGSYEEALK 423
           W +L+  C  HG  +  +K
Sbjct: 559 WHTLLRACRIHGDKDRGIK 577



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 154/298 (51%), Gaps = 10/298 (3%)

Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEA 320
           ++ +G+   +++ + L+  Y +C D  SAR L +     + V+WN++I G+A QG  + A
Sbjct: 1   MIRAGYRPGLFLSNNLLAAYVRCADTRSARLLFDGMPRRDVVTWNTLIAGYATQGSARSA 60

Query: 321 LSLFKKMHARD--IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
           L  F+    RD  + +D FTY +VL       D  + ++ H L V +G     FV+N++I
Sbjct: 61  LGAFRDAR-RDGAVAVDRFTYAAVLAACGGAGDWRSGRAAHGLAVVSGLARTAFVSNSVI 119

Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
           DMYAK   +D   + F+  +++D +SW  L++     G  E A      M  SG+  D  
Sbjct: 120 DMYAKCRMIDEVRLAFDRAEERDEVSWNLLLSAYVRMGWPEVAANVLVWMHRSGVELDAF 179

Query: 439 VVSSILSACAELTVLE-FGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
            +  IL AC+EL   E   + +H   +K G    + V +++V +YAK G + +A +VF S
Sbjct: 180 ALGGILKACSELEDSEDVRRMLHGCVIKVGLDLDVFVGSTMVDMYAKNGGLEEAIKVFGS 239

Query: 498 MHTRDVITWTALIMGCAQNGKGK------EALQFYDQMLARGTKPDYITFVGLLFACS 549
           + +++V+ +  +I G A+ G         EA++ Y  M  R  +P   TF  +L  C+
Sbjct: 240 IPSQNVVIYNTMIAGFARLGNDPCPEIRMEAVRIYSNMFRRRIRPSKFTFKSVLEVCN 297



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 109/269 (40%), Gaps = 21/269 (7%)

Query: 463 FLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEA 522
            +++G    L + N+L+  Y +C     A  +FD M  RDV+TW  LI G A  G  + A
Sbjct: 1   MIRAGYRPGLFLSNNLLAAYVRCADTRSARLLFDGMPRRDVVTWNTLIAGYATQGSARSA 60

Query: 523 L-QFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMI 581
           L  F D         D  T+  +L AC  AG   + R     +  V G+         +I
Sbjct: 61  LGAFRDARRDGAVAVDRFTYAAVLAACGGAGDWRSGR-AAHGLAVVSGLARTAFVSNSVI 119

Query: 582 DLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNA- 640
           D+  +   + E +   D+   E D   W  LLSA   +  +   E AAN L  +      
Sbjct: 120 DMYAKCRMIDEVRLAFDR-AEERDEVSWNLLLSA---YVRMGWPEVAANVLVWMHRSGVE 175

Query: 641 MPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRT 700
           +    L  +     + ED+  VR+++         GC  ++    + +F+          
Sbjct: 176 LDAFALGGILKACSELEDSEDVRRMLH--------GCV-IKVGLDLDVFVGST-----MV 221

Query: 701 DIYSKIDEIMLLIKEAGYVPDMNFALHNV 729
           D+Y+K   +   IK  G +P  N  ++N 
Sbjct: 222 DMYAKNGGLEEAIKVFGSIPSQNVVIYNT 250



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 4/80 (5%)

Query: 49  SGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREA----KKLFNETPFKNFFTWSSL 104
           +G++  A + FE++   D F+W+ MI +YA  G  REA    KK+ + +   N F + ++
Sbjct: 435 TGDLKAAKKTFERIPSLDTFSWSQMILSYAVHGHEREALLLFKKMRDCSVIINEFAFLAV 494

Query: 105 IYGYSNYGLDIEAFELFWQM 124
           +   S+ GL  E F  +  M
Sbjct: 495 LVACSHQGLIDEGFRHYESM 514


>gi|297824049|ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325746|gb|EFH56166.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 565

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 215/544 (39%), Positives = 331/544 (60%), Gaps = 1/544 (0%)

Query: 267 EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK 326
           + N    + LI+ Y + GDL SAR++ +        +WN+MI G  +  +++E LSLF++
Sbjct: 22  KKNFMSSNILINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLSLFRE 81

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
           MH      D++T  SV +  A    ++  + +H   +K G E    VN++L  MY + G 
Sbjct: 82  MHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGK 141

Query: 387 LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSA 446
           L    +V   M  +++++W +LI G A +G  E  L  +  M+ISG  P+ +   ++LS+
Sbjct: 142 LQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSS 201

Query: 447 CAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITW 506
           C++L +   GQQ+HA  +K G  S ++V +SL+ +Y+KCGC+ DA + F      D + W
Sbjct: 202 CSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMW 261

Query: 507 TALIMGCAQNGKGKEALQFYDQMLARG-TKPDYITFVGLLFACSHAGLAENARWYFESMD 565
           +++I     +G+G EA++ ++ M  +   + + + F+ LL+ACSH+GL +     F+ M 
Sbjct: 262 SSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMMV 321

Query: 566 KVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELG 625
           + YG KPG  HY C++DLLGR+G L +A+A++  M  +PD  +WK LLSAC +H + E+ 
Sbjct: 322 EKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKNAEMA 381

Query: 626 ERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQ 685
           ++    + E++P ++  YV L+N++++A +W D + VRK M+ + ++KE G SW E   +
Sbjct: 382 QKVFKEILEIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGE 441

Query: 686 VHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKL 745
           VH F   DR      +IYS + E+ L +K  GY PD    LH+++EE KE  L  HSEKL
Sbjct: 442 VHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKL 501

Query: 746 AVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSC 805
           AVAF L+ LP+GAPIRI KNLRVC DCH A KYIS +  R I LRD +RFHHF  G CSC
Sbjct: 502 AVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIMNREITLRDGSRFHHFINGKCSC 561

Query: 806 GDYW 809
           GDYW
Sbjct: 562 GDYW 565



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 202/386 (52%), Gaps = 4/386 (1%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           +S  G++  A  L+E+M  ++  + N +I  Y  +G L  A+K+F+E P +   TW+++I
Sbjct: 4   YSKLGDLPSAVALYERMRKKNFMSSNILINGYVRAGDLVSARKVFDEMPDRKLTTWNAMI 63

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            G   +  + E   LF +M   G+ P +YTL +V    +    +  G+Q HGYAIK   +
Sbjct: 64  AGLIQFEYNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLE 123

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
           L+  V + L  MY +   + + E + +  P  +N VAW T+I G +QNG     +  ++ 
Sbjct: 124 LDLVVNSSLAHMYMRNGKLQDGEIVIRSMP-VRNLVAWNTLIMGNAQNGCPETVLYLYKM 182

Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           M++ G   N+ TF ++L++C+ ++ R  G Q+H   +  G  + V V S+LI MY+KCG 
Sbjct: 183 MKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGC 242

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR-DIKIDDFTYPSVL- 343
           L  A +     E ++EV W+SMI  +   G   EA+ LF  M  + ++++++  + ++L 
Sbjct: 243 LGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLY 302

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DV 402
            C  S +     +    ++ K GF+        ++D+  + G LD A  +   M  K D 
Sbjct: 303 ACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDP 362

Query: 403 ISWTSLITGCAYHGSYEEALKYFSDM 428
           + W +L++ C  H + E A K F ++
Sbjct: 363 VIWKTLLSACNIHKNAEMAQKVFKEI 388



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 175/360 (48%), Gaps = 4/360 (1%)

Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
           L++ Y +   +  A  +F   PD K    W  MI G  Q  Y  + +  FR+M   G   
Sbjct: 31  LINGYVRAGDLVSARKVFDEMPDRK-LTTWNAMIAGLIQFEYNEEGLSLFREMHGLGFSP 89

Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
           +++T  S+ +  A + +   G Q+HG  +  G E ++ V S+L  MY + G L     ++
Sbjct: 90  DEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVI 149

Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
               + N V+WN++I+G A+ G  +  L L+K M     + +  T+ +VL+  +      
Sbjct: 150 RSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRG 209

Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
             + +H+  +K G      V ++LI MY+K G L  A   F+  +D+D + W+S+I+   
Sbjct: 210 QGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYG 269

Query: 414 YHGSYEEALKYFSDM-RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL-KSGGCSS 471
           +HG  +EA+K F+ M   + +  + V   ++L AC+   + + G ++  + + K G    
Sbjct: 270 FHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPG 329

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQML 530
           L     +V +  + GC++ A  +  SM  + D + W  L+  C  +   + A + + ++L
Sbjct: 330 LKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKNAEMAQKVFKEIL 389



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 136/275 (49%), Gaps = 5/275 (1%)

Query: 77  YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
           Y  +G+L++ + +    P +N   W++LI G +  G       L+  M++ G RP++ T 
Sbjct: 136 YMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITF 195

Query: 137 DNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD 196
             VL  CS   +  +G+Q H  AIK        VV+ L+ MY+KC C+ +A   F    D
Sbjct: 196 VTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERED 255

Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACAAVSARDFGA 255
            ++ V W++MI+ Y  +G G +AI+ F  M  +  +E N+  F ++L AC+    +D G 
Sbjct: 256 -EDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGL 314

Query: 256 QVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMIVGFAR 313
           ++   ++   GF+  +   + ++D+  + G LD A  +++   I  + V W +++     
Sbjct: 315 ELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNI 374

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
               + A  +FK++   D   D   Y  + N  AS
Sbjct: 375 HKNAEMAQKVFKEILEIDPN-DSACYVLLANVHAS 408


>gi|302799324|ref|XP_002981421.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
 gi|300150961|gb|EFJ17609.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
          Length = 789

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 259/749 (34%), Positives = 399/749 (53%), Gaps = 14/749 (1%)

Query: 68  FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
           F  N ++  YA     R+A+ L +  P +N  +W+++I   +  G    +   F +M  +
Sbjct: 48  FLSNHLLHMYARLESSRDAELLLDRMPRRNALSWNAVIRANAQAGDFPRSLLFFQRMLQD 107

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G  P        L L      +Q GE    +A K+ FD +  V T L+ MY +C  +  A
Sbjct: 108 GSLPDAVVF---LSLIKAPRTIQEGEIVQEFAEKSGFDRSFVVGTALIGMYGRCGRLDRA 164

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
           +  F    + +  V+W  +IT YS+     +++  FR+M ++G+  N  T   I +A A 
Sbjct: 165 KDAFDRIQE-RGVVSWNALITVYSRGDEKEQSLRVFREMLLQGIAPNAVTIICIASAVAG 223

Query: 248 VSAR--DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           ++A+    G  +H C + SG  +   V +++I+++ + G++  A  + E  +  +  SWN
Sbjct: 224 IAAKITTCGNLIHSCSIDSGLISVTTVANSIINLFGRGGNITRANDIFEKMDRRDVCSWN 283

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +MI  FA+ G    AL L+ +M    I+ D  T+ +VL       DL   +S+H  +   
Sbjct: 284 TMISAFAQNGHSSGALDLYGRM---TIRPDGVTFVNVLEACDCPDDLERGESIHRDVRAH 340

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
           G++    V  AL+ MY + G LD A  VF  +Q   VI+  ++I   A  G  + +L +F
Sbjct: 341 GYDSDLIVATALVSMYRRCGRLDRAAEVFAAIQHPGVITLNAIIAAHAQFGRADGSLLHF 400

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFG-QQVHAVFLK-SGGCSS--LSVDNSLVLV 481
             M   GI P    + ++L ACA         + +H    +  G C    + V N+LV +
Sbjct: 401 RQMLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRWMAECPGDCDPHDILVRNALVNM 460

Query: 482 YAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITF 541
           YAKCG ++ A  +FD+    +V TW A++ G AQ+G    A++   +M   G  PD I+F
Sbjct: 461 YAKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYANMAVRLLYEMQLAGISPDPISF 520

Query: 542 VGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
              L A SHA   E+    F ++ + YG+ P  +HY  ++DLLGR+G L EA+  L  M 
Sbjct: 521 TAALSASSHARQVEDGARIFYAISRDYGLIPSVEHYGAVVDLLGRAGWLEEAEGFLRSMA 580

Query: 602 GEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAAR 661
              DA  W ALL ACR+H D +   RAA  +  ++P +   Y  LSN+YS AG+W++A  
Sbjct: 581 IAADAAAWMALLGACRIHKDQDRAMRAAEAIVAIDPSHGASYTVLSNVYSAAGRWDEAEE 640

Query: 662 VRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIK-EAGYVP 720
           +R+ M   G RKEPG SW+E  ++VH F  +DR HP   +IY ++DE+ +++K E  YVP
Sbjct: 641 IRRRMSENGARKEPGRSWIEVKNRVHEFAVKDRSHPRTGEIYERLDELRVVLKSEEDYVP 700

Query: 721 DMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYIS 780
           D+   LH+VE+E +E  L +HSEKLA+ FGL+   +G+ I I KNLR+C DCH  MK  S
Sbjct: 701 DVGSVLHDVEDEHRENLLWHHSEKLALGFGLIGTKEGSKITIIKNLRICEDCHVVMKLTS 760

Query: 781 AVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
               R I++RD  RFHHF  G CSC D W
Sbjct: 761 KNTKREIVVRDCYRFHHFNGGACSCSDCW 789



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 148/546 (27%), Positives = 255/546 (46%), Gaps = 44/546 (8%)

Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           ++ RL      L++G + H   I++ +  + F+   L+ MYA+ +   +AE L    P  
Sbjct: 17  DLARLVDESTSLEQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLDRMPR- 75

Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
           +N ++W  +I   +Q G   +++  F+ M  +G   +   F S++ A   +     G  V
Sbjct: 76  RNALSWNAVIRANAQAGDFPRSLLFFQRMLQDGSLPDAVVFLSLIKAPRTIQE---GEIV 132

Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
                 SGF+ +  V +ALI MY +CG LD A+   +  +    VSWN++I  ++R    
Sbjct: 133 QEFAEKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVYSRGDEK 192

Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS------VHSLIVKTGFEGYK 371
           +++L +F++M  + I  +  T    + C AS +    AK       +HS  + +G     
Sbjct: 193 EQSLRVFREMLLQGIAPNAVT----IICIASAVAGIAAKITTCGNLIHSCSIDSGLISVT 248

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
            V N++I+++ + GN+  A  +F  M  +DV SW ++I+  A +G    AL  +  M I 
Sbjct: 249 TVANSIINLFGRGGNITRANDIFEKMDRRDVCSWNTMISAFAQNGHSSGALDLYGRMTIR 308

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
              PD V   ++L AC     LE G+ +H      G  S L V  +LV +Y +CG ++ A
Sbjct: 309 ---PDGVTFVNVLEACDCPDDLERGESIHRDVRAHGYDSDLIVATALVSMYRRCGRLDRA 365

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
             VF ++    VIT  A+I   AQ G+   +L  + QML  G +P   T V +L AC+ +
Sbjct: 366 AEVFAAIQHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLGACATS 425

Query: 552 GLAENA-----RWYFESMDKVYGIKPG---PDHYA---CMIDLLGRSGKLIEAKALLDQM 600
           G A +A     RW  E         PG   P        ++++  + G L  A+ + D  
Sbjct: 426 GAAASAGRDLHRWMAEC--------PGDCDPHDILVRNALVNMYAKCGDLDAARGIFDA- 476

Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP----YVQLSNMYSTAGKW 656
             + + + W A+++    HG   +  R    L+E++     P    +    +  S A + 
Sbjct: 477 APQGNVSTWNAIMAGYAQHGYANMAVRL---LYEMQLAGISPDPISFTAALSASSHARQV 533

Query: 657 EDAARV 662
           ED AR+
Sbjct: 534 EDGARI 539



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/459 (24%), Positives = 223/459 (48%), Gaps = 20/459 (4%)

Query: 54  EAGQLFEKMSDRDGF-----TWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY 108
           + G++ ++ +++ GF         +I  Y   GRL  AK  F+    +   +W++LI  Y
Sbjct: 127 QEGEIVQEFAEKSGFDRSFVVGTALIGMYGRCGRLDRAKDAFDRIQERGVVSWNALITVY 186

Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQR----GEQFHGYAIKTCF 164
           S      ++  +F +M L+G  P+  T+  +    ++ G+  +    G   H  +I +  
Sbjct: 187 SRGDEKEQSLRVFREMLLQGIAPNAVTI--ICIASAVAGIAAKITTCGNLIHSCSIDSGL 244

Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
                V   +++++ +   I  A  +F+   D ++  +W TMI+ ++QNG+   A++ + 
Sbjct: 245 ISVTTVANSIINLFGRGGNITRANDIFEKM-DRRDVCSWNTMISAFAQNGHSSGALDLYG 303

Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
            M    +  +  TF ++L AC      + G  +H  + + G+++++ V +AL+ MY +CG
Sbjct: 304 RM---TIRPDGVTFVNVLEACDCPDDLERGESIHRDVRAHGYDSDLIVATALVSMYRRCG 360

Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL- 343
            LD A  +    +    ++ N++I   A+ G    +L  F++M    I+   FT  +VL 
Sbjct: 361 RLDRAAEVFAAIQHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAVLG 420

Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYK---FVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
            C  S    +  + +H  + +   +       V NAL++MYAK G+LD A  +F+     
Sbjct: 421 ACATSGAAASAGRDLHRWMAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAPQG 480

Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV- 459
           +V +W +++ G A HG    A++   +M+++GI PD +  ++ LSA +    +E G ++ 
Sbjct: 481 NVSTWNAIMAGYAQHGYANMAVRLLYEMQLAGISPDPISFTAALSASSHARQVEDGARIF 540

Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
           +A+    G   S+    ++V +  + G + +A     SM
Sbjct: 541 YAISRDYGLIPSVEHYGAVVDLLGRAGWLEEAEGFLRSM 579



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 105/411 (25%), Positives = 176/411 (42%), Gaps = 53/411 (12%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
           F   G I  A  +FEKM  RD  +WNTMI+A+A +                         
Sbjct: 258 FGRGGNITRANDIFEKMDRRDVCSWNTMISAFAQN------------------------- 292

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            G+S+  LD     L+ +M +   RP   T  NVL  C     L+RGE  H       +D
Sbjct: 293 -GHSSGALD-----LYGRMTI---RPDGVTFVNVLEACDCPDDLERGESIHRDVRAHGYD 343

Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
            +  V T LV MY +C  +  A  +F         +    +I  ++Q G    ++  FR 
Sbjct: 344 SDLIVATALVSMYRRCGRLDRAAEVFAAIQH-PGVITLNAIIAAHAQFGRADGSLLHFRQ 402

Query: 226 MRVEGVESNQFTFPSIL-----TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
           M   G+  ++FT  ++L     +  AA + RD    +  C        ++ V++AL++MY
Sbjct: 403 MLQLGIRPSKFTLVAVLGACATSGAAASAGRDLHRWMAECP-GDCDPHDILVRNALVNMY 461

Query: 281 AKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
           AKCGDLD+AR + + +   N  +WN+++ G+A+ G+   A+ L  +M    I  D  ++ 
Sbjct: 462 AKCGDLDAARGIFDAAPQGNVSTWNAIMAGYAQHGYANMAVRLLYEMQLAGISPDPISFT 521

Query: 341 SVLNCFASNIDLNNAKSVHSLIVK-----TGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
           + L+  +    + +   +   I +        E Y     A++D+  + G L+ A     
Sbjct: 522 AALSASSHARQVEDGARIFYAISRDYGLIPSVEHY----GAVVDLLGRAGWLEEAEGFLR 577

Query: 396 LMQDKDVISWTSLITG-CAYHGSYEEALKYFSDMRISGICPDHVVVSSILS 445
            M      +    + G C  H   + A++  +   I  I P H    ++LS
Sbjct: 578 SMAIAADAAAWMALLGACRIHKDQDRAMR--AAEAIVAIDPSHGASYTVLS 626


>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
          Length = 853

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 237/675 (35%), Positives = 384/675 (56%), Gaps = 6/675 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +  + ++  YA++G L  A+  F+  P ++   W+ ++ G    G    A  LF  M+
Sbjct: 175 DVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMR 234

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G  P+  TL   L +C+    L  G Q H  A+K   +    V   L+ MYAKC+C+ 
Sbjct: 235 ASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLD 294

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
           +A  LF++ P   + V W  MI+G  QNG   +A   F DM+  G   +  T  S+L A 
Sbjct: 295 DAWRLFELMPQ-DDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPAL 353

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
             ++    G +VHG I+ +    +V++ SAL+D+Y KC D+  A+ L + +   + V  +
Sbjct: 354 TDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGS 413

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +MI G+   G  +EAL +F+ +  + IK +  T  SVL   AS   L   + +H  +++ 
Sbjct: 414 TMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRN 473

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
            +E   +V +AL+DMYAK G LD +  +F  M  KD ++W S+I+  + +G  +EAL  F
Sbjct: 474 AYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLF 533

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             M + GI  +++ +S+ LSACA L  + +G+++H V +K    + +  +++L+ +YAKC
Sbjct: 534 RQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKC 593

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G +  A RVF+ M  ++ ++W ++I     +G  KE++     M   G KPD++TF+ L+
Sbjct: 594 GNLELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALI 653

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
            AC+HAGL E     F+ M K Y I P  +H+ACM+DL  RSGKL +A   +  M  +PD
Sbjct: 654 SACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPD 713

Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
           A +W ALL ACRVH ++EL + A+  LF+L+P N+  YV +SN+ + AG+W+  ++VR+L
Sbjct: 714 AGIWGALLHACRVHRNVELADIASQELFKLDPANSGYYVLMSNINAVAGRWDGVSKVRRL 773

Query: 666 MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYV--PDMN 723
           MK   I K PG SWV+ N+  H+F++ D+ HP   DIY+ +  ++  ++E GYV  PD+ 
Sbjct: 774 MKDNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKTLLQELREEGYVPRPDLC 833

Query: 724 FALH---NVEEEGKE 735
             +H   N + E K+
Sbjct: 834 HPMHPDNNTQVEFKK 848



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 118/384 (30%), Positives = 202/384 (52%), Gaps = 6/384 (1%)

Query: 42  ALVDFSNSGEIDEA-GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
           AL D +   +  E  G +     + D F  + ++  Y     +R A+ L++     +   
Sbjct: 352 ALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVI 411

Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
            S++I GY   G+  EA ++F  +  +  +P+  T+ +VL  C+    L  G+Q HGY +
Sbjct: 412 GSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVL 471

Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF-KMFPDGKNHVAWTTMITGYSQNGYGFKA 219
           +  ++   +V + L+DMYAKC  +  + Y+F KM    K+ V W +MI+ +SQNG   +A
Sbjct: 472 RNAYERKCYVESALMDMYAKCGRLDLSHYIFLKM--SQKDEVTWNSMISSFSQNGKPQEA 529

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
           ++ FR M +EG++ N  T  + L+ACA++ A  +G ++HG  +    +A+++ +SALIDM
Sbjct: 530 LDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDM 589

Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
           YAKCG+L+ A R+ E+    NEVSWNS+I  +   G  KE++SL   M     K D  T+
Sbjct: 590 YAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTF 649

Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA-LIDMYAKQGNLDCAFMVFNLMQ 398
            ++++  A    +     +   + K      +  + A ++D+Y++ G LD A      M 
Sbjct: 650 LALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMP 709

Query: 399 DK-DVISWTSLITGCAYHGSYEEA 421
            K D   W +L+  C  H + E A
Sbjct: 710 FKPDAGIWGALLHACRVHRNVELA 733



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 147/513 (28%), Positives = 245/513 (47%), Gaps = 15/513 (2%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKT--CFDLNAFVV-TGLVDMYAKCKCIFEAEYLFKMFP 195
           VLR C     L  G Q H  A+ +    D N   + T L+ MY   +   +A  +F   P
Sbjct: 38  VLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFSALP 97

Query: 196 DGK--NHVAWTTMITGYSQNGYGFKAIECFRDM--RVEGVESNQFTFPSILTACAAVSAR 251
                + + W  +I G++  G    A+  +  M         +  T P ++ +CAA+ A 
Sbjct: 98  RAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALGAM 157

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
             G  VH    + G   +VYV SAL+ MYA  G L +AR   +     + V WN M+ G 
Sbjct: 158 SLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGC 217

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
            + G    A+ LF+ M A   + +  T    L+  A++ DL +   +HSL VK G E   
Sbjct: 218 IKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEV 277

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
            V N L+ MYAK   LD A+ +F LM   D+++W  +I+GC  +G + EA   F DM+ S
Sbjct: 278 AVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRS 337

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
           G  PD + + S+L A  +L  L+ G++VH   +++     + + ++LV +Y KC  +  A
Sbjct: 338 GARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMA 397

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC-SH 550
             ++D+    DV+  + +I G   NG  +EALQ +  +L +  KP+ +T   +L  C S 
Sbjct: 398 QNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASM 457

Query: 551 AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
           A L    + +   +   Y  K   +  + ++D+  + G+L  +  +  +M  + D   W 
Sbjct: 458 AALPLGQQIHGYVLRNAYERKCYVE--SALMDMYAKCGRLDLSHYIFLKM-SQKDEVTWN 514

Query: 611 ALLSACRVHGDLELGERAANNLFELEPMNAMPY 643
           +++S+   +G      + A +LF    M  + Y
Sbjct: 515 SMISSFSQNGK----PQEALDLFRQMCMEGIKY 543


>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
 gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
 gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
          Length = 645

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 230/577 (39%), Positives = 326/577 (56%), Gaps = 1/577 (0%)

Query: 234 NQFTFPSILTACAAVS-ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
           +  TFP  L + + +      G Q+H   L      N +V ++L+ +YA+CG L  A+R+
Sbjct: 69  SHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRV 128

Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
            +     + VSW ++I  +   G  +EA+ + +   A  ++ D FT   VL   A   DL
Sbjct: 129 FDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADL 188

Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
              ++V     + G     FV  A +D+Y K G +  A  VF+ M+DKD ++W +++ G 
Sbjct: 189 ATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGY 248

Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
           A +G   EAL  F  M+  G+ PD   V+  LSAC  L  L+ G+Q   +        + 
Sbjct: 249 ASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNP 308

Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
            +  +L+ +YAKCG   +A  VF  M  +D+I W A+I+G    G  K A     QM   
Sbjct: 309 VLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKS 368

Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIE 592
           G K +  TF+GLL +C+H GL ++ R YF +M K+Y I P  +HY C++DLL R+G L E
Sbjct: 369 GVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQE 428

Query: 593 AKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYST 652
           A  L+D M    +A +  ALL  C++H + EL E     L  LEP N+  YV LSN+YS 
Sbjct: 429 AHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSN 488

Query: 653 AGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLL 712
            G+WEDAA++R  MK +G+ K P CSWVE   +VH F   D+ HPL   IY K+DE+ L 
Sbjct: 489 RGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLDELGLE 548

Query: 713 IKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDC 772
           +K  GY P     + +VE+E KE  L +HSEKLA+AF LL    G  IR+ KNLRVC DC
Sbjct: 549 MKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLRVCSDC 608

Query: 773 HTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           HTA+K IS +  R II+RD+NRFH F+ G+CSC DYW
Sbjct: 609 HTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 645



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 188/403 (46%), Gaps = 4/403 (0%)

Query: 131 PSQYTLDNVLRLCS-LKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           PS  T    L+  S L   L+ GEQ H  ++K     N  V+T L+ +YA+C  +  A+ 
Sbjct: 68  PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 127

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
           +F   P     V+WT +IT Y   G   +A+   R+    G+  + FT   +LTACA V+
Sbjct: 128 VFDEMPHPST-VSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVA 186

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
               G  V       G   +V+V +A +D+Y KCG++  AR + +     + V+W +M+ 
Sbjct: 187 DLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVG 246

Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
           G+A  G  +EAL LF  M A  ++ D +     L+       L+  +    ++    F  
Sbjct: 247 GYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLD 306

Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
              +  ALIDMYAK G+   A++VF  M+ KD+I W ++I G    G  + A      M 
Sbjct: 307 NPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQME 366

Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCI 488
            SG+  +      +L +C    +++ G++      K    S  +     +V + ++ G +
Sbjct: 367 KSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLL 426

Query: 489 NDANRVFDSMH-TRDVITWTALIMGCAQNGKGKEALQFYDQML 530
            +A+++ D M    + +   AL+ GC  +   + A     Q++
Sbjct: 427 QEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLI 469



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 195/423 (46%), Gaps = 18/423 (4%)

Query: 12  SLRCRSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWN 71
           +LR    +  P+  T  +  ++K AS L   L     +GE   A  L +  S  +     
Sbjct: 58  ALRLHCLLPNPSHLTFPI--ALKSASRLPHPL----RAGEQLHARSL-KLPSHTNPHVLT 110

Query: 72  TMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRP 131
           +++  YA  G L  A+++F+E P  +  +W++LI  Y + G   EA  +       G RP
Sbjct: 111 SLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRP 170

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
             +T   VL  C+    L  GE     A +     + FV T  VD+Y KC  + +A  +F
Sbjct: 171 DSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVF 230

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
               D K+ VAW  M+ GY+ NG+  +A++ F  M+ EGV  + +     L+AC  + A 
Sbjct: 231 DKMRD-KDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGAL 289

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
           D G Q    +    F  N  + +ALIDMYAKCG    A  + +     + + WN+MI+G 
Sbjct: 290 DLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGL 349

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLI----VKTG 366
              G  K A +L  +M    +K++D T+  +L +C  + +  +  +  H++     +   
Sbjct: 350 GMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPR 409

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLM-QDKDVISWTSLITGCAYHGSYEEALKYF 425
            E Y      ++D+ ++ G L  A  + + M    + +   +L+ GC  H + E A    
Sbjct: 410 IEHY----GCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVL 465

Query: 426 SDM 428
           + +
Sbjct: 466 TQL 468


>gi|359481819|ref|XP_002283419.2| PREDICTED: MATE efflux family protein 1 [Vitis vinifera]
          Length = 977

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 211/478 (44%), Positives = 310/478 (64%), Gaps = 12/478 (2%)

Query: 332 IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
           ++ DD  +PS           +  +SVHS  VKTG++   FV ++++DMYAK G +  A 
Sbjct: 6   VRPDDHIFPSATKACGILSRCDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGEIGDAR 65

Query: 392 MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELT 451
            +F+ M D++V+SW+ +I G +  G  EEAL+ F    I  +  +    SS++  C   T
Sbjct: 66  KMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRVCGNST 125

Query: 452 VLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIM 511
           +LE G+Q+H + LK+   SS  V +SL+ +Y+KCG I DA  VF  +  R++  W A+++
Sbjct: 126 LLELGKQIHGLCLKTSYDSSSFVGSSLISLYSKCGVIEDAYLVFHEIPIRNLGMWNAMLI 185

Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIK 571
            CAQ+   ++A   + QM   G KP++ITF+ +L+ACSHAGL E  ++YFE M K YGI+
Sbjct: 186 ACAQHAHTEKAFDLFKQMEGVGMKPNFITFLCVLYACSHAGLVEKGQFYFELM-KEYGIE 244

Query: 572 PGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANN 631
           PG  HYA M+DLLGR+GKL +A +++ +M  EP  +VW ALL+ CR+HGD EL    A+ 
Sbjct: 245 PGAQHYASMVDLLGRAGKLKDAVSIIKKMPMEPTESVWGALLTGCRIHGDTELASFVADR 304

Query: 632 LFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFIS 691
           +FEL P++           S AG++E+AAR RK+++ +G++KE G SWVE  +++H F +
Sbjct: 305 VFELGPVS-----------SAAGRYEEAARARKMLRDQGVKKETGLSWVEEGNRIHTFAA 353

Query: 692 EDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGL 751
            DR HP   DIY K++E+   ++ AGY+ D +F L  V+ E K   + YHSE+LA+AFGL
Sbjct: 354 GDRSHPYTKDIYKKLEELGEEMERAGYIADTSFVLQEVDGEEKNQTIRYHSERLAIAFGL 413

Query: 752 LTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           ++ P   PIR+ KNLRVCGDCHTA+K++S    R II+RD+NRFH F+ GNCSC DYW
Sbjct: 414 ISFPPERPIRVMKNLRVCGDCHTAIKFMSKCCGRTIIVRDNNRFHRFEDGNCSCRDYW 471



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 163/305 (53%), Gaps = 1/305 (0%)

Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSA 289
           GV  +   FPS   AC  +S  D G  VH   + +G++ +V+V S+++DMYAKCG++  A
Sbjct: 5   GVRPDDHIFPSATKACGILSRCDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGEIGDA 64

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
           R++ +     N VSW+ MI G+++ G  +EAL LFK+    D+ ++DFT+ SV+    ++
Sbjct: 65  RKMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRVCGNS 124

Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
             L   K +H L +KT ++   FV ++LI +Y+K G ++ A++VF+ +  +++  W +++
Sbjct: 125 TLLELGKQIHGLCLKTSYDSSSFVGSSLISLYSKCGVIEDAYLVFHEIPIRNLGMWNAML 184

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
             CA H   E+A   F  M   G+ P+ +    +L AC+   ++E GQ    +  + G  
Sbjct: 185 IACAQHAHTEKAFDLFKQMEGVGMKPNFITFLCVLYACSHAGLVEKGQFYFELMKEYGIE 244

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT-WTALIMGCAQNGKGKEALQFYDQ 528
                  S+V +  + G + DA  +   M      + W AL+ GC  +G  + A    D+
Sbjct: 245 PGAQHYASMVDLLGRAGKLKDAVSIIKKMPMEPTESVWGALLTGCRIHGDTELASFVADR 304

Query: 529 MLARG 533
           +   G
Sbjct: 305 VFELG 309



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 153/295 (51%), Gaps = 2/295 (0%)

Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
           G RP  +   +  + C +      G+  H +A+KT +D + FV + +VDMYAKC  I +A
Sbjct: 5   GVRPDDHIFPSATKACGILSRCDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGEIGDA 64

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
             +F   PD +N V+W+ MI GYSQ G   +A+  F+   +E ++ N FTF S++  C  
Sbjct: 65  RKMFDEMPD-RNVVSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRVCGN 123

Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
            +  + G Q+HG  L + ++++ +V S+LI +Y+KCG ++ A  +     I N   WN+M
Sbjct: 124 STLLELGKQIHGLCLKTSYDSSSFVGSSLISLYSKCGVIEDAYLVFHEIPIRNLGMWNAM 183

Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
           ++  A+    ++A  LFK+M    +K +  T+  VL   +    +   +    L+ + G 
Sbjct: 184 LIACAQHAHTEKAFDLFKQMEGVGMKPNFITFLCVLYACSHAGLVEKGQFYFELMKEYGI 243

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEA 421
           E       +++D+  + G L  A  +   M  +   S W +L+TGC  HG  E A
Sbjct: 244 EPGAQHYASMVDLLGRAGKLKDAVSIIKKMPMEPTESVWGALLTGCRIHGDTELA 298



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 132/248 (53%), Gaps = 2/248 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D F  ++M+  YA  G + +A+K+F+E P +N  +WS +IYGYS  G D EA  LF Q
Sbjct: 42  DCDVFVGSSMVDMYAKCGEIGDARKMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLFKQ 101

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
             +E    + +T  +V+R+C    LL+ G+Q HG  +KT +D ++FV + L+ +Y+KC  
Sbjct: 102 ALIEDLDVNDFTFSSVVRVCGNSTLLELGKQIHGLCLKTSYDSSSFVGSSLISLYSKCGV 161

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           I +A  +F   P  +N   W  M+   +Q+ +  KA + F+ M   G++ N  TF  +L 
Sbjct: 162 IEDAYLVFHEIPI-RNLGMWNAMLIACAQHAHTEKAFDLFKQMEGVGMKPNFITFLCVLY 220

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEV 302
           AC+     + G      +   G E      ++++D+  + G L  A  +++   ++  E 
Sbjct: 221 ACSHAGLVEKGQFYFELMKEYGIEPGAQHYASMVDLLGRAGKLKDAVSIIKKMPMEPTES 280

Query: 303 SWNSMIVG 310
            W +++ G
Sbjct: 281 VWGALLTG 288



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 127/256 (49%), Gaps = 23/256 (8%)

Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
           +G+ PD  +  S   AC  L+  + GQ VH+  +K+G    + V +S+V +YAKCG I D
Sbjct: 4   NGVRPDDHIFPSATKACGILSRCDIGQSVHSFAVKTGYDCDVFVGSSMVDMYAKCGEIGD 63

Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
           A ++FD M  R+V++W+ +I G +Q G+ +EAL+ + Q L      +  TF  ++  C +
Sbjct: 64  ARKMFDEMPDRNVVSWSGMIYGYSQMGEDEEALRLFKQALIEDLDVNDFTFSSVVRVCGN 123

Query: 551 AGLAENARWYFESMDKVYG--IKPGPDHY----ACMIDLLGRSGKLIEAKALLDQMVGEP 604
           + L E  +       +++G  +K   D      + +I L  + G +IE   L+   +   
Sbjct: 124 STLLELGK-------QIHGLCLKTSYDSSSFVGSSLISLYSKCG-VIEDAYLVFHEIPIR 175

Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP--YVQLSNMY--STAGKWEDAA 660
           +  +W A+L AC  H      E+A +   ++E +   P     L  +Y  S AG  E   
Sbjct: 176 NLGMWNAMLIACAQHAHT---EKAFDLFKQMEGVGMKPNFITFLCVLYACSHAGLVEKGQ 232

Query: 661 RVRKLMKSRGIRKEPG 676
              +LMK  GI  EPG
Sbjct: 233 FYFELMKEYGI--EPG 246


>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
 gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
          Length = 605

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 225/605 (37%), Positives = 354/605 (58%), Gaps = 1/605 (0%)

Query: 206 MITGYSQNGYGFKAIECFRDMRV-EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS 264
           MI+G+ +N     +I  F DM +  G   +  T  ++L A A +     G Q+    +  
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60

Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLF 324
           GF ++V + + LI +++KCG+++ AR L       + +S N+MI GF   G  ++++ LF
Sbjct: 61  GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120

Query: 325 KKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
           K++ +   ++   T   ++  ++          +H   VK G   +  V+ AL  +Y + 
Sbjct: 121 KELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRL 180

Query: 385 GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
             +  A  +F+   +K + SW ++I+GC  +G  + A+  F  M+ + + P+ V V+SIL
Sbjct: 181 NEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSIL 240

Query: 445 SACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVI 504
           SACA++  L  G+ VH++   +   S++ V  +L+ +YAKCG I  A  +FD M  ++ +
Sbjct: 241 SACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEV 300

Query: 505 TWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESM 564
           TW A+I G   +G G+EAL+ +  ML+   KP  +TF+ +L+ACSHAGL +     F +M
Sbjct: 301 TWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTM 360

Query: 565 DKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLEL 624
              +G +P  +HYACM+D+LGR+G+L +A   +  M  EP   VW ALL AC +H D  L
Sbjct: 361 VHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHKDTNL 420

Query: 625 GERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNS 684
              A+  LFEL+P N   YV +SN+YS   K+  AA VR++ K + + K PGC+ +E   
Sbjct: 421 AHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLIEIGQ 480

Query: 685 QVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEK 744
             H+F S D+ HP    IY+++D++   + EAG+  +    LH++EEE KE+ +  HSEK
Sbjct: 481 VPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQTETTTVLHDLEEEEKELTMKVHSEK 540

Query: 745 LAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCS 804
           LA+AFGL++   GA IRI KNLRVC DCH   K++S +  R I++RD+NRFHHFK G CS
Sbjct: 541 LAIAFGLISTEPGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVVRDANRFHHFKDGLCS 600

Query: 805 CGDYW 809
           CGDYW
Sbjct: 601 CGDYW 605



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/345 (31%), Positives = 168/345 (48%), Gaps = 3/345 (0%)

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           +I+ ++  G +  A+ LF E   K+  + +++I G++  G   ++  LF ++   G R S
Sbjct: 72  LISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVS 131

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
             T+  ++ + S  G        HG+ +K     ++ V T L  +Y +   +  A  LF 
Sbjct: 132 SSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFD 191

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
              + K   +W  MI+G +QNG    AI  F+ M+   V  N  T  SIL+ACA + A  
Sbjct: 192 ESAE-KTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALS 250

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G  VH  I S+ FE+NVYV +ALIDMYAKCG +  AR L +     NEV+WN+MI G+ 
Sbjct: 251 LGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYG 310

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYK 371
             G  +EAL LF  M +  +K    T+ SVL  C  + +        H+++   GFE   
Sbjct: 311 LHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLA 370

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYH 415
                ++D+  + G L  A      M  +     W +L+  C  H
Sbjct: 371 EHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIH 415



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 197/413 (47%), Gaps = 4/413 (0%)

Query: 104 LIYGYSNYGLDIEAFELFWQMQL-EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT 162
           +I G+       ++  +F  M L  G R    T+  VL   +    L+ G Q    AIK 
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60

Query: 163 CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIEC 222
            F  +  ++TGL+ +++KC  +  A  LF      K+ ++   MI+G++ NG    ++  
Sbjct: 61  GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRK-KDLISCNAMISGFTCNGETEDSVRL 119

Query: 223 FRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK 282
           F+++   G   +  T   ++   +          +HG  +  G  ++  V +AL  +Y +
Sbjct: 120 FKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCR 179

Query: 283 CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
             ++  AR+L + S      SWN+MI G  + G    A+SLF+ M   ++  +  T  S+
Sbjct: 180 LNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSI 239

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV 402
           L+  A    L+  + VHSLI    FE   +V+ ALIDMYAK G++  A  +F+LM +K+ 
Sbjct: 240 LSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNE 299

Query: 403 ISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAV 462
           ++W ++I+G   HG  +EALK F DM  S + P  +   S+L AC+   +++ G  +   
Sbjct: 300 VTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHT 359

Query: 463 FLKSGGCSSLSVDNS-LVLVYAKCGCINDANRVFDSMHTRD-VITWTALIMGC 513
            +   G   L+   + +V +  + G +  A     +M        W AL+  C
Sbjct: 360 MVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGAC 412



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 6/123 (4%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF----NET 93
           ++ AL+D ++  G I  A +LF+ M +++  TWN MI+ Y   G  +EA KLF    + +
Sbjct: 270 VSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSS 329

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRG 152
                 T+ S++Y  S+ GL  E   +F  M  + G+ P       ++ +    G L++ 
Sbjct: 330 VKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKA 389

Query: 153 EQF 155
            +F
Sbjct: 390 LEF 392


>gi|147780613|emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
          Length = 654

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 243/654 (37%), Positives = 354/654 (54%), Gaps = 56/654 (8%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLD--IEAFELFWQMQLEG 128
           N+++  YA   RLREAK +F     K+  +W+ +I GYS +G        ELF +M+ E 
Sbjct: 44  NSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAEN 103

Query: 129 YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIK--TCFDLNAFVVTGLVDMYAKCKCIFE 186
             P+ +T   V    S       G   H  AIK  +C D+  FV + L++MY K     E
Sbjct: 104 TAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDV--FVGSSLMNMYCKAGLTPE 161

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACA 246
           A  +F   P+ +N V+W TMI+GY+      +A+  FR MR E    N+F F S+L+A  
Sbjct: 162 ARKVFDTMPE-RNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALT 220

Query: 247 AVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS 306
                + G Q+H   + +G  + V V +AL+ MYAKCG LD A +  E S   N ++W++
Sbjct: 221 LPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSA 280

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
           MI G A+ G   +AL LF  MH   I+  +FT+  V+N  +        K VH  ++K G
Sbjct: 281 MITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLG 340

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
           FE   +V  AL+DMYAK  ++  A   F+ +Q+ D++ WTS+I G   +G  E+AL  + 
Sbjct: 341 FESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYG 400

Query: 427 DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
            M + GI P+ + ++S+L AC+ L  LE G+Q+HA  +K G    + + ++L  +YAKCG
Sbjct: 401 RMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCG 460

Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLF 546
           C+ D   VF  M  RDVI+W A+I G +QNG GKEAL+ +++M   GTKPDY+TFV +L 
Sbjct: 461 CLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILS 520

Query: 547 ACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDA 606
           ACSH GL E    YF  M   +G+ P  +HYACM+D+L R+GKL EA             
Sbjct: 521 ACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEA------------- 567

Query: 607 TVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLM 666
                          +E  E A  +                      G WED  RVR++M
Sbjct: 568 ---------------IEFTESATID---------------------HGMWEDVERVRRMM 591

Query: 667 KSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVP 720
           K RG+ KEPGCSW+E  S VH+F+ +D+ HP   DI+ ++ ++   +K+ GY P
Sbjct: 592 KLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIHVELRQLSKQMKDEGYEP 645



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/317 (34%), Positives = 158/317 (49%), Gaps = 33/317 (10%)

Query: 29  VGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAK 87
           V N +     +  ALV  ++  G +D+A Q FE  SD++  TW+ MI   A SG   +A 
Sbjct: 236 VKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGXAQSGDSDKAL 295

Query: 88  KLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKG 147
           KLF+                                M L G RPS++T   V+  CS  G
Sbjct: 296 KLFS-------------------------------SMHLSGIRPSEFTFVGVINACSDLG 324

Query: 148 LLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
               G+Q H Y +K  F+   +V+T LVDMYAKC  I +A   F    +  + V WT+MI
Sbjct: 325 AAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQE-PDIVLWTSMI 383

Query: 208 TGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFE 267
            GY QNG    A+  +  M +EG+  N+ T  S+L AC++++A + G Q+H   +  GF 
Sbjct: 384 GGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFG 443

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM 327
             V + SAL  MYAKCG L     +       + +SWN+MI G ++ G  KEAL LF++M
Sbjct: 444 LEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEM 503

Query: 328 HARDIKIDDFTYPSVLN 344
                K D  T+ ++L+
Sbjct: 504 QLEGTKPDYVTFVNILS 520


>gi|302823459|ref|XP_002993382.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
 gi|300138813|gb|EFJ05567.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
          Length = 655

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 234/646 (36%), Positives = 368/646 (56%), Gaps = 13/646 (2%)

Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
           F+   LV  Y +CK I +A   F    + KN  ++  M+  Y +N    KA++ F+    
Sbjct: 18  FLGNCLVRAYGRCKSIDDAVAAFSEIAE-KNEYSYAIMMGAYQENDLHKKALQLFKKSIN 76

Query: 229 EGVESNQFTFPSILTACAAVSARDF---GAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
           E ++ NQ T+ ++L +CA +   D+   G ++H   ++ GF  ++ VQ++LI MYAKCG 
Sbjct: 77  EELQQNQATYVTVLKSCAHL-GEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGS 135

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
              A  + E  E  N +S+ SMI  +     H EA  L+KKM +  I  D + Y + L  
Sbjct: 136 FKFAAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAV 195

Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYK--FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVI 403
             +   +   +++H   VK G    +    +NAL+ MY + G +  A  VF+ ++ KD+ 
Sbjct: 196 CPT---IREGEAIH---VKLGNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIRYKDLA 249

Query: 404 SWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVF 463
           S+ ++I   A +    +A+  + +M    + P+    +S+L AC++L  L  G+++H   
Sbjct: 250 SYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKV 309

Query: 464 LKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEAL 523
                 + ++ + +LV +YAKCG  ++A  VF+    ++V TWT+L+   +Q G+ +  L
Sbjct: 310 KGGDQPTDVAYNTALVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYRL 369

Query: 524 QFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDL 583
           + Y +M   G  PD +TF  +  ACSH+GL +    YF +M + + I P   HY CMIDL
Sbjct: 370 EAYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPHYTCMIDL 429

Query: 584 LGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPY 643
           LGR G+L EA+ L+  M   PD   W  LLSAC+V+GDL++G RA   + EL P ++ PY
Sbjct: 430 LGRVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKIGARAYKRITELNPPDSGPY 489

Query: 644 VQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIY 703
           + + NMY+ AGKW D A V+K++K RG+ K PG S +E   ++H F+  D  HPL  +I 
Sbjct: 490 LLMGNMYAKAGKWADVAEVKKMIKQRGLAKPPGKSMIEAQRRIHEFVCGDTAHPLNQEIR 549

Query: 704 SKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIF 763
           +++ E+   +  AGY PD    L +V EE K   L +HSE++A+  GLLT   GA + I 
Sbjct: 550 ARLQEVHEQLSHAGYEPDTKEVLVDVNEEVKPELLLFHSERMALGLGLLTSDAGATLHIV 609

Query: 764 KNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           KNLR+C DCH+  K +S +  R +++RDS+RFH F+ G+CSCGDYW
Sbjct: 610 KNLRICPDCHSFFKLVSKMLHRKVLVRDSHRFHIFQRGSCSCGDYW 655



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 229/473 (48%), Gaps = 13/473 (2%)

Query: 63  SDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFW 122
            +++ F  N ++ AY     + +A   F+E   KN ++++ ++  Y    L  +A +LF 
Sbjct: 13  QEKETFLGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLFK 72

Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKG--LLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK 180
           +   E  + +Q T   VL+ C+  G   L+ G++ H +AI   F  +  V   L+ MYAK
Sbjct: 73  KSINEELQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAK 132

Query: 181 CKCI-FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFP 239
           C    F A    KM P  KN +++T+MI  Y+      +A E ++ M  EG+  + + + 
Sbjct: 133 CGSFKFAAGVFEKMEP--KNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYA 190

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
           + L  C  +     G  +H   L +         +AL+ MY + G + SA+ + +     
Sbjct: 191 AALAVCPTIRE---GEAIH-VKLGNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIRYK 246

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
           +  S+N+MI  FA+     +A+SL+ +M  R+++ + +T+ SVL+  +    L   K +H
Sbjct: 247 DLASYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIH 306

Query: 360 SLIVKTGFEGYKFV-NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
              VK G +      N AL++MYAK G+   A  VFN    K+V +WTSL++  +  G  
Sbjct: 307 KK-VKGGDQPTDVAYNTALVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQPGQS 365

Query: 419 EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS- 477
           +  L+ +  M   G+ PD V  ++I +AC+   + + G        +      L    + 
Sbjct: 366 QYRLEAYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPHYTC 425

Query: 478 LVLVYAKCGCINDANRVFDSM-HTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
           ++ +  + G + +A  +  +M ++ DV+TWT L+  C   G  K   + Y ++
Sbjct: 426 MIDLLGRVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKIGARAYKRI 478



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 175/355 (49%), Gaps = 16/355 (4%)

Query: 267 EANVYVQSALIDMYAKCGDLDSARRLLEYSEI--DNEVSWNSMIVGFARQGFHKEALSLF 324
           E   ++ + L+  Y +C  +D A  +  +SEI   NE S+  M+  +     HK+AL LF
Sbjct: 14  EKETFLGNCLVRAYGRCKSIDDA--VAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLF 71

Query: 325 KKMHARDIKIDDFTYPSVL-NCFASNID-LNNAKSVHSLIVKTGFEGYKFVNNALIDMYA 382
           KK    +++ +  TY +VL +C     D L + K +H   +  GF     V N+LI MYA
Sbjct: 72  KKSINEELQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYA 131

Query: 383 KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
           K G+   A  VF  M+ K++IS+TS+I    +   + EA + +  M   GI PD    ++
Sbjct: 132 KCGSFKFAAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAA 191

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
            L+ C   T+ E G+ +H V L +    +    N+LV +Y + G I  A  VFD +  +D
Sbjct: 192 ALAVCP--TIRE-GEAIH-VKLGNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIRYKD 247

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
           + ++  +I   A+   G +A+  Y +M  R  +P+  TF  +L ACS  G     +   E
Sbjct: 248 LASYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGK---E 304

Query: 563 SMDKVYGIKPGPD--HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
              KV G     D  +   ++++  + G   EA+A+ +   G  +   W +L+SA
Sbjct: 305 IHKKVKGGDQPTDVAYNTALVNMYAKCGSTHEARAVFND-CGLKNVFTWTSLMSA 358



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 15/173 (8%)

Query: 47  SNSGEIDEAGQLFEKMSDRDGFT---WNT-MIAAYANSGRLREAKKLFNETPFKNFFTWS 102
           S  G + E  ++ +K+   D  T   +NT ++  YA  G   EA+ +FN+   KN FTW+
Sbjct: 294 SKLGALTEGKEIHKKVKGGDQPTDVAYNTALVNMYAKCGSTHEARAVFNDCGLKNVFTWT 353

Query: 103 SLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT 162
           SL+  YS  G      E + +M  EG  P   T   +   CS  GL   G  +       
Sbjct: 354 SLMSAYSQPGQSQYRLEAYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGLLYF-----R 408

Query: 163 CFDLNAFVV------TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
               + ++V      T ++D+  +   + EAE L +  P   + V WT +++ 
Sbjct: 409 AMREDHWIVPLQPHYTCMIDLLGRVGRLREAEELVRTMPYSPDVVTWTILLSA 461


>gi|302786698|ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
 gi|300157279|gb|EFJ23905.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
          Length = 485

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 214/485 (44%), Positives = 314/485 (64%), Gaps = 2/485 (0%)

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
           M  R ++ +  TY +VL+ F +   L   + VHS +   G E    V  AL++MY K  +
Sbjct: 1   MEIRGVERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQS 60

Query: 387 LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS--GICPDHVVVSSIL 444
           ++ A   F  +   +V+SW++++   A +G    AL+ + +M  +  G+ P+ V   ++L
Sbjct: 61  VEEARAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLL 120

Query: 445 SACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVI 504
            AC+ L  L  G+++HA   + G  + L V N+LV  Y +CG + DA  VFD M  RDVI
Sbjct: 121 DACSFLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVI 180

Query: 505 TWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESM 564
           +W+++I   AQ G+  EA++ Y +ML+ GT PD I F+ +LFACS++G+ E +  +F S+
Sbjct: 181 SWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSI 240

Query: 565 DKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLEL 624
                ++P  +HYACM+D+LGR+GKL +A+ LL  M   P   ++  +LSAC+++ D+E 
Sbjct: 241 VGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVER 300

Query: 625 GERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNS 684
           GE AA  +FEL+P N+ PY+ L+N+YS A + +DAAR+RKLM+ RGI+K+PGCSW+E   
Sbjct: 301 GEAAAEVVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLD 360

Query: 685 QVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEK 744
           +VH FI+ D+ HP R +IY++I  +   +KEAGY  D    L +VEE+ KE  L YHSEK
Sbjct: 361 RVHEFIAGDKMHPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEK 420

Query: 745 LAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCS 804
           LA+AFGL++ P GAP+RI KNLRVC DCH A K IS V  R I++RD+NRFHHF  G CS
Sbjct: 421 LAIAFGLISTPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFLDGMCS 480

Query: 805 CGDYW 809
           C DYW
Sbjct: 481 CNDYW 485



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 150/300 (50%), Gaps = 5/300 (1%)

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M++ G   ++ T   VL   +  G L+ G + H        +++  V T LV+MY KC+ 
Sbjct: 1   MEIRGVERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQS 60

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM--RVEGVESNQFTFPSI 241
           + EA   F+      N V+W+ M+  Y+QNG+   A+E +R+M    +G+  N+ TF ++
Sbjct: 61  VEEARAAFEKISR-PNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITL 119

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           L AC+ + A   G ++H  +   GF+ ++ V +AL++ Y +CG L  A+ + +     + 
Sbjct: 120 LDACSFLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDV 179

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHS 360
           +SW+SMI  FA++G   EA+ L+ +M +     DD  + SVL  C  S +   +     S
Sbjct: 180 ISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRS 239

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYE 419
           ++  T  E        ++D+  + G L  A  +  LM      + + ++++ C  +   E
Sbjct: 240 IVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVE 299



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 123/264 (46%), Gaps = 20/264 (7%)

Query: 43  LVDFSNSGEIDEAGQLFEKMS----DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNF 98
           L  F+  G ++E  ++  +++    + D      ++  Y     + EA+  F +    N 
Sbjct: 17  LSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEEARAAFEKISRPNV 76

Query: 99  FTWSSLIYGYSNYGLDIEAFELFWQM--QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
            +WS+++  Y+  G    A EL+ +M    +G  P++ T   +L  CS  G L  G + H
Sbjct: 77  VSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACSFLGALAEGRKIH 136

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG---KNHVAWTTMITGYSQN 213
               +  FD +  V   LV+ Y +C  + +A+ +F    DG   ++ ++W++MI+ ++Q 
Sbjct: 137 AAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVF----DGMRRRDVISWSSMISAFAQR 192

Query: 214 GYGFKAIECFRDMRVEGVESNQFTFPSILTACA----AVSARDFGAQVHGCILSSGFEAN 269
           G   +A+E +  M  EG   +   F S+L AC+      ++ DF   + G    +  E  
Sbjct: 193 GRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVG---DTQVEPT 249

Query: 270 VYVQSALIDMYAKCGDLDSARRLL 293
           +   + ++D+  + G L  A  LL
Sbjct: 250 LEHYACMVDVLGRAGKLRDAEDLL 273



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 5/189 (2%)

Query: 60  EKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFE 119
           E+  D D    N ++  Y   G L +AK +F+    ++  +WSS+I  ++  G   EA E
Sbjct: 141 ERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAME 200

Query: 120 LFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQ-RGEQFHGYAIKTCFDLNAFVVTGLVDMY 178
           L+ +M  EG  P      +VL  CS  G+++  G+ F      T  +        +VD+ 
Sbjct: 201 LYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVL 260

Query: 179 AKCKCIFEAEYLFKMFPDGKNHVAWTTMITG---YSQNGYGFKAIECFRDMRVEGVESNQ 235
            +   + +AE L ++ P     + + TM++    Y+    G  A E   ++  E   S  
Sbjct: 261 GRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAAEVVFELDPEN-SSPY 319

Query: 236 FTFPSILTA 244
            T  +I +A
Sbjct: 320 ITLANIYSA 328


>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
 gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
          Length = 635

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 216/527 (40%), Positives = 327/527 (62%), Gaps = 3/527 (0%)

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM--HARDIKID-DFTYPSV 342
           L SAR L +     +  SW++++   AR G  + AL+++++M        +D +FT  S 
Sbjct: 109 LASARALFDRMPRRDHFSWSAIVSAHARHGQPRAALAIYRRMLREPGSAGVDNEFTASSA 168

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV 402
           L    +       + +H  +V+ G +    V +AL DMYAK G +D A  VF+ M  +DV
Sbjct: 169 LAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDV 228

Query: 403 ISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAV 462
           +SWT+++          E  + F  M  SGI P+    + +L ACAE T  + G+QVH  
Sbjct: 229 VSWTAMVERYFDARRDGEGFRLFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGR 288

Query: 463 FLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEA 522
             KS    S   +++LV +Y+K G +  A RVF  M   D+++WTA+I G AQNG+  EA
Sbjct: 289 MTKSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEA 348

Query: 523 LQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMID 582
           L+++D +L  G +PD++TFVG+L AC+HAGL +     F S+   YGI+   DHYAC+ID
Sbjct: 349 LRYFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVID 408

Query: 583 LLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           LL RSG    A+ +++ M  +P+  +W +LL  CR+H ++ L   AA  LFE+EP N   
Sbjct: 409 LLSRSGLFERAEEMINTMSVKPNKFLWASLLGGCRIHKNVRLARWAAEALFEIEPENPAT 468

Query: 643 YVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDI 702
           YV L+N+Y++ G +++    R++M+ +GI K P  SW+E  +++H+F+  D+ HP    +
Sbjct: 469 YVTLANIYASVGLFDEVENTRRIMELKGITKMPASSWIEVGTRMHVFLVGDKLHPQAEQV 528

Query: 703 YSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRI 762
           Y+ + ++ + ++E GYV D  F LH+VE+E K+  + YHSE+LAVAFG++  P+GAPI++
Sbjct: 529 YALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGAPIKV 588

Query: 763 FKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           FKNLR+CGDCHT +K IS +  R II+RDSNRFHHFK G+CSC DYW
Sbjct: 589 FKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 196/397 (49%), Gaps = 22/397 (5%)

Query: 34  KPASDL--NRAL-VDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGR-LREAKKL 89
           +P S L  NR L +  S+   + +A  L   +   D  ++NT++AA   S R L  A+ L
Sbjct: 56  RPPSTLLSNRILHLLSSHPATLPDALALLSSLPSTDVCSYNTLVAALGRSPRGLASARAL 115

Query: 90  FNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDN------VLRLC 143
           F+  P ++ F+WS+++  ++ +G    A  ++ +M  E   P    +DN       L   
Sbjct: 116 FDRMPRRDHFSWSAIVSAHARHGQPRAALAIYRRMLRE---PGSAGVDNEFTASSALAAA 172

Query: 144 SLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAW 203
           +     + G + H + ++   D +A V + L DMYAKC  + +A  +F   P  ++ V+W
Sbjct: 173 TAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMP-VRDVVSW 231

Query: 204 TTMITGY---SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
           T M+  Y    ++G GF+    F  M   G++ N+FT+  +L ACA  ++   G QVHG 
Sbjct: 232 TAMVERYFDARRDGEGFR---LFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGR 288

Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEA 320
           +  S    + + +SAL+ MY+K GD+ +A R+       + VSW +MI G+A+ G   EA
Sbjct: 289 MTKSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEA 348

Query: 321 LSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV-HSLIVKTGFEGYKFVNNALID 379
           L  F  +     + D  T+  VL+  A    ++   S+ HS+  + G E        +ID
Sbjct: 349 LRYFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVID 408

Query: 380 MYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYH 415
           + ++ G  + A  + N M  K +   W SL+ GC  H
Sbjct: 409 LLSRSGLFERAEEMINTMSVKPNKFLWASLLGGCRIH 445



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 172/333 (51%), Gaps = 8/333 (2%)

Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE----GVESNQFTFPSIL 242
           A  LF   P  ++H +W+ +++ ++++G    A+  +R M  E    GV+ N+FT  S L
Sbjct: 112 ARALFDRMPR-RDHFSWSAIVSAHARHGQPRAALAIYRRMLREPGSAGVD-NEFTASSAL 169

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
            A  A      G ++H  ++  G +A+  V SAL DMYAKCG +D AR + +   + + V
Sbjct: 170 AAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVV 229

Query: 303 SWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
           SW +M+  +       E   LF +M    I+ ++FTY  VL   A        K VH  +
Sbjct: 230 SWTAMVERYFDARRDGEGFRLFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRM 289

Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
            K+      F  +AL+ MY+K G++  A  VF  M   D++SWT++I+G A +G  +EAL
Sbjct: 290 TKSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEAL 349

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV-HAVFLKSGGCSSLSVDNSLVLV 481
           +YF  +  SG  PDHV    +LSACA   +++ G  + H++  + G   +      ++ +
Sbjct: 350 RYFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVIDL 409

Query: 482 YAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
            ++ G    A  + ++M  + +   W +L+ GC
Sbjct: 410 LSRSGLFERAEEMINTMSVKPNKFLWASLLGGC 442


>gi|356523117|ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14330-like [Glycine max]
          Length = 650

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 223/577 (38%), Positives = 350/577 (60%), Gaps = 12/577 (2%)

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEA--NVYVQSALIDMYAKCGDLDSARRLLEYSE-- 297
           L AC +  + + G ++H  +L S      N  +++ LI +Y+ CG ++ ARR+ +  +  
Sbjct: 77  LHACISRRSLEHGRKLHLHLLRSQNRVLENPTLKTKLITLYSVCGRVNEARRVFQIDDEK 136

Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA-- 355
              E  W +M +G++R GF  EAL L++ M +  +K  +F +   L   +   DL+NA  
Sbjct: 137 PPEEPVWVAMAIGYSRNGFSHEALLLYRDMLSCCVKPGNFAFSMALKACS---DLDNALV 193

Query: 356 -KSVHSLIVKTGF-EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
            +++H+ IVK    E  + VNNAL+ +Y + G  D    VF  M  ++V+SW +LI G A
Sbjct: 194 GRAIHAQIVKHDVGEADQVVNNALLGLYVEIGCFDEVLKVFEEMPQRNVVSWNTLIAGFA 253

Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS 473
             G   E L  F  M+  G+    + ++++L  CA++T L  G+++H   LKS   + + 
Sbjct: 254 GQGRVFETLSAFRVMQREGMGFSWITLTTMLPVCAQVTALHSGKEIHGQILKSRKNADVP 313

Query: 474 VDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG 533
           + NSL+ +YAKCG I    +VFD MH++D+ +W  ++ G + NG+  EAL  +D+M+  G
Sbjct: 314 LLNSLMDMYAKCGEIGYCEKVFDRMHSKDLTSWNTMLAGFSINGQIHEALCLFDEMIRYG 373

Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
            +P+ ITFV LL  CSH+GL    +  F ++ + +G++P  +HYAC++D+LGRSGK  EA
Sbjct: 374 IEPNGITFVALLSGCSHSGLTSEGKRLFSNVMQDFGVQPSLEHYACLVDILGRSGKFDEA 433

Query: 594 KALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTA 653
            ++ + +   P  ++W +LL++CR++G++ L E  A  LFE+EP N   YV LSN+Y+ A
Sbjct: 434 LSVAENIPMRPSGSIWGSLLNSCRLYGNVALAEVVAERLFEIEPNNPGNYVMLSNIYANA 493

Query: 654 GKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKI-DEIMLL 712
           G WED  RVR++M   G++K+ GCSW++   ++H F++        +  Y KI +E+   
Sbjct: 494 GMWEDVKRVREMMALTGMKKDAGCSWIQIKHKIHTFVAGGSSDFRCSAEYKKIWNELSNA 553

Query: 713 IKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDC 772
           +K  GYVP+    LH++ EE K + +  HSE+LA  F L+    G PIRI KNLRVC DC
Sbjct: 554 VKNLGYVPNTGVVLHDINEEMKAVWVCEHSERLAAVFALINTGAGMPIRITKNLRVCVDC 613

Query: 773 HTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           H+ MK +S V  R I+LRD+NRFHHF+ G+CSC DYW
Sbjct: 614 HSWMKAVSKVTRRLIVLRDTNRFHHFENGSCSCKDYW 650



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 199/418 (47%), Gaps = 16/418 (3%)

Query: 73  MIAAYANSGRLREAKKLF---NETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGY 129
           +I  Y+  GR+ EA+++F   +E P +    W ++  GYS  G   EA  L+  M     
Sbjct: 113 LITLYSVCGRVNEARRVFQIDDEKPPEEP-VWVAMAIGYSRNGFSHEALLLYRDMLSCCV 171

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIK-TCFDLNAFVVTGLVDMYAKCKCIFEAE 188
           +P  +     L+ CS       G   H   +K    + +  V   L+ +Y +  C  E  
Sbjct: 172 KPGNFAFSMALKACSDLDNALVGRAIHAQIVKHDVGEADQVVNNALLGLYVEIGCFDEVL 231

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
            +F+  P  +N V+W T+I G++  G  F+ +  FR M+ EG+  +  T  ++L  CA V
Sbjct: 232 KVFEEMPQ-RNVVSWNTLIAGFAGQGRVFETLSAFRVMQREGMGFSWITLTTMLPVCAQV 290

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
           +A   G ++HG IL S   A+V + ++L+DMYAKCG++    ++ +     +  SWN+M+
Sbjct: 291 TALHSGKEIHGQILKSRKNADVPLLNSLMDMYAKCGEIGYCEKVFDRMHSKDLTSWNTML 350

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGF 367
            GF+  G   EAL LF +M    I+ +  T+ ++L+ C  S +     +   +++   G 
Sbjct: 351 AGFSINGQIHEALCLFDEMIRYGIEPNGITFVALLSGCSHSGLTSEGKRLFSNVMQDFGV 410

Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVF-NLMQDKDVISWTSLITGCAYHGSYEEALKYFS 426
           +        L+D+  + G  D A  V  N+        W SL+  C  +G+   AL    
Sbjct: 411 QPSLEHYACLVDILGRSGKFDEALSVAENIPMRPSGSIWGSLLNSCRLYGNV--ALAEVV 468

Query: 427 DMRISGICP----DHVVVSSILSACAELTVLEFGQQVHAV--FLKSGGCSSLSVDNSL 478
             R+  I P    ++V++S+I +       ++  +++ A+    K  GCS + + + +
Sbjct: 469 AERLFEIEPNNPGNYVMLSNIYANAGMWEDVKRVREMMALTGMKKDAGCSWIQIKHKI 526



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 128/264 (48%), Gaps = 7/264 (2%)

Query: 32  SVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN 91
           ++K  SDL+ ALV     G    A  +   + + D    N ++  Y   G   E  K+F 
Sbjct: 181 ALKACSDLDNALV-----GRAIHAQIVKHDVGEADQVVNNALLGLYVEIGCFDEVLKVFE 235

Query: 92  ETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQR 151
           E P +N  +W++LI G++  G   E    F  MQ EG   S  TL  +L +C+    L  
Sbjct: 236 EMPQRNVVSWNTLIAGFAGQGRVFETLSAFRVMQREGMGFSWITLTTMLPVCAQVTALHS 295

Query: 152 GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYS 211
           G++ HG  +K+  + +  ++  L+DMYAKC  I   E +F      K+  +W TM+ G+S
Sbjct: 296 GKEIHGQILKSRKNADVPLLNSLMDMYAKCGEIGYCEKVFDRM-HSKDLTSWNTMLAGFS 354

Query: 212 QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANV 270
            NG   +A+  F +M   G+E N  TF ++L+ C+       G ++   ++   G + ++
Sbjct: 355 INGQIHEALCLFDEMIRYGIEPNGITFVALLSGCSHSGLTSEGKRLFSNVMQDFGVQPSL 414

Query: 271 YVQSALIDMYAKCGDLDSARRLLE 294
              + L+D+  + G  D A  + E
Sbjct: 415 EHYACLVDILGRSGKFDEALSVAE 438


>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 705

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 242/657 (36%), Positives = 361/657 (54%), Gaps = 72/657 (10%)

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKC------KCIF------------------------ 185
           H   IKT F    F+   LVD+Y KC      + +F                        
Sbjct: 42  HARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGAL 101

Query: 186 -EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
            EA  LFK  P+ ++  +W  M++G++Q     +A+    DM  E    N+++F S L+A
Sbjct: 102 DEALNLFKCMPE-RDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSA 160

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           CA +     G Q+HG I  S +  +VY+ SAL+DMY+KC  + SA+R  +  ++ N VSW
Sbjct: 161 CAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSW 220

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           NS+I  + + G   +AL +F +M    I+ D+ T  SV +  AS   +     +H+ ++K
Sbjct: 221 NSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMK 280

Query: 365 -TGFEGYKFVNNALIDMYAK-------------------------------QGNLDCAFM 392
              +     + NAL+DMYAK                                 ++  A +
Sbjct: 281 HDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARL 340

Query: 393 VFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV 452
           +F+ M +++V+SW +LI G   +G  EEA++ F  ++   I P H    ++L+ACA L  
Sbjct: 341 MFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLAD 400

Query: 453 LEFGQQVHAVFLK------SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITW 506
           L+ G+Q H   LK      SG  S + V NSL+ +Y KCG + D   VF+ M  RD ++W
Sbjct: 401 LKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSW 460

Query: 507 TALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDK 566
            A+I+G AQNG G EAL+ + +ML  G +PD++T +G+L ACSHAGL E  R YF+SM  
Sbjct: 461 NAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTI 520

Query: 567 VYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGE 626
            +G+ P  DHY CM+DLLGR+G L EA  L+  M  EPDA VW +LL+AC+VHG++ LG+
Sbjct: 521 EHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGK 580

Query: 627 RAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQV 686
             A  L E++P+N+ PYV LSNMY+  G+W+D  RVRK M+  G+ K+PGCSW+   S +
Sbjct: 581 YVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWISIQSHL 640

Query: 687 HIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSE 743
           H+F+ +D+ HP + DIY  +  +   +K  GYVP+ +      EE   E+ L  HSE
Sbjct: 641 HVFMVKDKRHPHKKDIYLILKILTEQMKRVGYVPEADDDEPYEEESDSELIL--HSE 695



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 163/556 (29%), Positives = 282/556 (50%), Gaps = 66/556 (11%)

Query: 16  RSKIIGPARYTHNVGNSVKPASDL---NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNT 72
           +SK +  AR  H      + +S++   NR +  +   G +++A ++F+ M  R+ F+WN 
Sbjct: 31  KSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQRNTFSWNA 90

Query: 73  MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
           ++ A    G L EA  LF   P ++  +W++++ G++      EA      M  E +  +
Sbjct: 91  VLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLN 150

Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
           +Y+  + L  C+    L  G Q HG   K+ + L+ ++ + LVDMY+KC+ +  A+  F 
Sbjct: 151 EYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFD 210

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
              D +N V+W ++IT Y QNG   KA+E F  M   G+E ++ T  S+ +ACA++SA  
Sbjct: 211 DM-DVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIR 269

Query: 253 FGAQVHGCILS-SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI------------- 298
            G Q+H  ++    +  ++ + +AL+DMYAKC  ++ AR + +   +             
Sbjct: 270 EGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGY 329

Query: 299 ------------------DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYP 340
                              N VSWN++I G+ + G ++EA+ LF  +    I    +T+ 
Sbjct: 330 AKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFG 389

Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGF------EGYKFVNNALIDMYAKQGNLDCAFMVF 394
           ++LN  A+  DL   +  H+ I+K GF      +   FV N+LIDMY K G ++   +VF
Sbjct: 390 NLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVF 449

Query: 395 NLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLE 454
             M ++D +SW ++I G A +G   EAL+ F +M +SG  PDHV +  +LSAC+      
Sbjct: 450 ERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACS------ 503

Query: 455 FGQQVHAVFLKSGGC--SSLSVDNSLVLV----------YAKCGCINDANRVFDSMHTR- 501
                HA  ++ G C   S+++++ LV V            + GC+++AN +  +M    
Sbjct: 504 -----HAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEP 558

Query: 502 DVITWTALIMGCAQNG 517
           D + W +L+  C  +G
Sbjct: 559 DAVVWGSLLAACKVHG 574



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 162/315 (51%), Gaps = 15/315 (4%)

Query: 39  LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
           L  ALVD ++    ++EA  +F++M  RD  +  +M++ YA +  ++ A+ +F+    +N
Sbjct: 290 LGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERN 349

Query: 98  FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
             +W++LI GY+  G + EA  LF  ++ E   P+ YT  N+L  C+    L+ G Q H 
Sbjct: 350 VVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHT 409

Query: 158 YAIKTCF------DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYS 211
           + +K  F      D + FV   L+DMY KC  + +   +F+   + +++V+W  MI GY+
Sbjct: 410 HILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLE-RDNVSWNAMIVGYA 468

Query: 212 QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG-AQVHGCILSSGFEANV 270
           QNGYG +A+E FR+M V G   +  T   +L+AC+     + G        +  G     
Sbjct: 469 QNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVK 528

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMIVGFARQGFHKEALSLFKKMHA 329
              + ++D+  + G LD A  L++   ++ + V W S++      G     ++L K +  
Sbjct: 529 DHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHG----NITLGKYVAE 584

Query: 330 RDIKIDDF-TYPSVL 343
           R ++ID   + P VL
Sbjct: 585 RLLEIDPLNSGPYVL 599



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 170/377 (45%), Gaps = 51/377 (13%)

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
           +D   +  +L+    +  +  A+ VH+ I+KT F    F+ N L+D+Y K G L+ A  V
Sbjct: 17  LDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKV 76

Query: 394 FNLMQ-------------------------------DKDVISWTSLITGCAYHGSYEEAL 422
           F+ MQ                               ++D  SW ++++G A    +EEAL
Sbjct: 77  FDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEAL 136

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
           ++  DM       +     S LSACA L  L  G Q+H +  KS     + + ++LV +Y
Sbjct: 137 RFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMY 196

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
           +KC  +  A R FD M  R++++W +LI    QNG   +AL+ + +M+  G +PD IT  
Sbjct: 197 SKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLA 256

Query: 543 GLLFAC-SHAGLAENARWYFESM-------DKVYGIKPGPDHYACMIDLLGRSGKLIEAK 594
            +  AC S + + E  + +   M       D V G          ++D+  +  ++ EA+
Sbjct: 257 SVASACASLSAIREGLQIHARVMKHDKYRNDLVLG--------NALVDMYAKCRRVNEAR 308

Query: 595 ALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAG 654
            + D+M    D     +++S       ++      +N+ E    N + +  L   Y+  G
Sbjct: 309 LVFDRMPLR-DVVSETSMVSGYAKASSVKAARLMFSNMME---RNVVSWNALIAGYTQNG 364

Query: 655 KWEDAARVRKLMKSRGI 671
           + E+A R+  L+K   I
Sbjct: 365 ENEEAVRLFLLLKRESI 381


>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
 gi|194705708|gb|ACF86938.1| unknown [Zea mays]
 gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
          Length = 635

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 218/527 (41%), Positives = 325/527 (61%), Gaps = 3/527 (0%)

Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM---HARDIKIDDFTYPSV 342
           L SAR L +     +  SW++++    R G  + AL+++++M          ++FT  S 
Sbjct: 109 LASARALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSA 168

Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV 402
           L    +       + +H  +V+ G +    V +AL DMYAK G LD A  VF+ M  +DV
Sbjct: 169 LAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDV 228

Query: 403 ISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAV 462
           +SWT+++      G   E  + F  M  SGI P+    + +L ACAE T  + G+QVH  
Sbjct: 229 VSWTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGR 288

Query: 463 FLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEA 522
             KS    S    ++LV +Y+K G +  A RVF  M   D+++WTA+I G AQNG+  EA
Sbjct: 289 MAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEA 348

Query: 523 LQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMID 582
           L  +D +L+ G +PD++TFVG+L AC+HAGL +     F S+   YGI+   DHYAC+ID
Sbjct: 349 LHCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVID 408

Query: 583 LLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
           LL RSG    A+ +++ M  +P+  +W +LL  CR+H ++ L   AA  LFE+EP N   
Sbjct: 409 LLSRSGLFERAEDMINTMPVKPNKFLWASLLGGCRIHKNVRLAWWAAEALFEIEPENPAT 468

Query: 643 YVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDI 702
           YV L+N+Y++ G +++   +R+ M+ RGI K P  SW+E  ++VH+F+  D+ HP   +I
Sbjct: 469 YVTLANIYASVGLFDEVENMRRTMELRGITKMPASSWIEVGTRVHVFLVGDKSHPQAEEI 528

Query: 703 YSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRI 762
           Y+ + ++ + ++E GYV D  F LH+VE+E K+  + YHSE+LAVAFG++  P+G+PI++
Sbjct: 529 YALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGSPIKV 588

Query: 763 FKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           FKNLR+CGDCHT +K IS +  R II+RDSNRFHHFK G+CSC DYW
Sbjct: 589 FKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW 635



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 189/396 (47%), Gaps = 16/396 (4%)

Query: 32  SVKPASDL--NRAL-VDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGR-LREAK 87
           S++P S L  NR L +  S+   + +A  L   +   D  ++NT++AA   S R L  A+
Sbjct: 54  SLRPPSTLLSNRILHLLSSHPATLPDALALLSSLPSTDVCSYNTLVAALGRSPRGLASAR 113

Query: 88  KLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDN------VLR 141
            LF+  P ++ F+WS+++  +  +G    A  ++ +M  E   P     DN       L 
Sbjct: 114 ALFDRMPRRDHFSWSAIVSAHVRHGQPRAALAIYRRMLRE---PGGSGADNEFTASSALA 170

Query: 142 LCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHV 201
             +     + G + H + ++   D +A V + L DMYAK   + +A  +F   P  ++ V
Sbjct: 171 AATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMP-VRDVV 229

Query: 202 AWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI 261
           +WT M+  Y   G   +    F  M   G+  N+FT+  +L ACA  ++   G QVHG +
Sbjct: 230 SWTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRM 289

Query: 262 LSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEAL 321
             S    + +  SAL+ MY+K GD+ +A R+       + VSW +MI G+A+ G   EAL
Sbjct: 290 AKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEAL 349

Query: 322 SLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV-HSLIVKTGFEGYKFVNNALIDM 380
             F  + +   + D  T+  VL+  A    ++    + HS+  K G E        +ID+
Sbjct: 350 HCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDL 409

Query: 381 YAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAYH 415
            ++ G  + A  + N M  K +   W SL+ GC  H
Sbjct: 410 LSRSGLFERAEDMINTMPVKPNKFLWASLLGGCRIH 445



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 168/337 (49%), Gaps = 6/337 (1%)

Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES---NQFTF 238
           + +  A  LF   P  ++H +W+ +++ + ++G    A+  +R M  E   S   N+FT 
Sbjct: 107 RGLASARALFDRMPR-RDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTA 165

Query: 239 PSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI 298
            S L A  A      G ++H  ++  G +A+  V SAL DMYAK G LD AR + +   +
Sbjct: 166 SSALAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPV 225

Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
            + VSW +M+  +   G   E   LF +M    I  ++FTY  VL   A        K V
Sbjct: 226 RDVVSWTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQV 285

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           H  + K+      F  +AL+ MY+K G++  A  VF  M   D++SWT++I+G A +G  
Sbjct: 286 HGRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQP 345

Query: 419 EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV-HAVFLKSGGCSSLSVDNS 477
           +EAL  F  +  SG  PDHV    +LSACA   +++ G  + H++  K G   +      
Sbjct: 346 DEALHCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYAC 405

Query: 478 LVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
           ++ + ++ G    A  + ++M  + +   W +L+ GC
Sbjct: 406 VIDLLSRSGLFERAEDMINTMPVKPNKFLWASLLGGC 442


>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Brachypodium distachyon]
          Length = 661

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 232/582 (39%), Positives = 331/582 (56%), Gaps = 39/582 (6%)

Query: 267 EANVYVQSALIDMYAKCGDLDSARRLLEYSEI----DNEVSWNSMIVGFARQGFHKEALS 322
           E NV   SALI  Y+  GD ++A  LLE         N ++WN ++ G  R G   +A++
Sbjct: 80  EKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVT 139

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYA 382
              +MH+     D       L+      +++  K VH  +VK G      V  ALIDMY 
Sbjct: 140 ALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYG 199

Query: 383 KQGNLD----------------CAFMVFNLMQDK-------------------DVISWTS 407
           K G  D                C  +V  L ++                    +V+SWTS
Sbjct: 200 KCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTS 259

Query: 408 LITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG 467
           ++  C  +G   EA+  F  M+  G+ P+ V +  +L A A +  L  G+  H   L+ G
Sbjct: 260 IVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKG 319

Query: 468 GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYD 527
               + V ++LV +YAKCG    A  +FD+M +R+V++W A+I G A +G    A+Q + 
Sbjct: 320 FLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFC 379

Query: 528 QMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRS 587
            M     KPD +TF  +L ACS AGL E  R YF  M + +GI P  +HYACM+ LLGRS
Sbjct: 380 SMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRS 439

Query: 588 GKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLS 647
           GKL EA  L+++M  EPD+ +W +LL +CRV+G++ L E AA  LF+LEP NA  YV LS
Sbjct: 440 GKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEPGNAGNYVLLS 499

Query: 648 NMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKID 707
           N+Y++   W+   RVR  MK+ G++KE GCSW+E  ++VH+ ++ D  HP+ T I  K++
Sbjct: 500 NIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVHMLLAGDNSHPMMTAITEKLN 559

Query: 708 EIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLR 767
           ++ + +   G+ P  +F LH+VEE+ K+  LA HSEKLAVA GL++   G P+R+ KNLR
Sbjct: 560 QLTIEMNRLGFAPSRDFVLHDVEEQEKDNILAVHSEKLAVALGLISTRPGTPLRVIKNLR 619

Query: 768 VCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +CGDCH AMK+IS+   R I +RD+NRFHHFK G CSCGDYW
Sbjct: 620 ICGDCHEAMKFISSFEQREISVRDTNRFHHFKDGKCSCGDYW 661



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/408 (29%), Positives = 179/408 (43%), Gaps = 40/408 (9%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF----KNFFTWSSLI 105
           G    A  +F++M +++   W+ +IA Y+  G    A  L  +        N  TW+ L+
Sbjct: 66  GATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLV 125

Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
            G +  G  ++A     +M  EG+ P    +   L        +  G+Q HGY +K    
Sbjct: 126 SGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCR 185

Query: 166 LNAFVVTGLVDMYAKC-------------------KC------------IFEAEYLFKMF 194
           L+A VVT L+DMY KC                    C            + EA  LF+ F
Sbjct: 186 LDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREF 245

Query: 195 ---PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
                  N V+WT+++    QNG   +A++ FR M+  GVE N  T P +L A A V+A 
Sbjct: 246 ICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAAL 305

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
             G   H   L  GF  +VYV SAL+DMYAKCG    AR + +     N VSWN+MI G+
Sbjct: 306 MHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGY 365

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGY 370
           A  G    A+ LF  M     K D  T+  VL  C  + +     +  + +    G    
Sbjct: 366 AMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPR 425

Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGS 417
                 ++ +  + G LD A+ + N M  + D   W SL+  C  +G+
Sbjct: 426 MEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGN 473



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 189/457 (41%), Gaps = 76/457 (16%)

Query: 129 YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
           + P  + L + L+ C  + L       H  A+ +    + FV + L+  Y +      A 
Sbjct: 16  FPPDPHLLPSALKSCPAQPL---ARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAAR 72

Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT----------- 237
            +F   P+ KN V W+ +I GYS  G    A      MR  GVE N  T           
Sbjct: 73  SVFDRMPE-KNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRS 131

Query: 238 ------------------FPS------ILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
                             FP        L+A   V     G QVHG ++ +G   +  V 
Sbjct: 132 GRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVV 191

Query: 274 SALIDMYAKCGDLDSARRLL-EYSEID--------------------------------- 299
           +ALIDMY KCG  D   R+  E S +D                                 
Sbjct: 192 TALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVE 251

Query: 300 -NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
            N VSW S++    + G   EA+ LF+ M +  ++ +  T P VL  FA+   L + +S 
Sbjct: 252 LNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSA 311

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           H   ++ GF    +V +AL+DMYAK G    A  +F+ M  ++V+SW ++I G A HG  
Sbjct: 312 HCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDA 371

Query: 419 EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS-LSVDNS 477
             A++ F  M+     PD V  + +L AC++  + E G++      +  G S  +     
Sbjct: 372 ANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYAC 431

Query: 478 LVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMGC 513
           +V +  + G +++A  + + M    D   W +L+  C
Sbjct: 432 MVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSC 468



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/345 (23%), Positives = 145/345 (42%), Gaps = 49/345 (14%)

Query: 320 ALSLFKKMHARDI----KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
           A  L + +HA  +      D F   S+L+ +        A+SV   + +    G+    +
Sbjct: 32  AQPLARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVFDRMPEKNVVGW----S 87

Query: 376 ALIDMYAKQGNLDCAFMVFNLMQ----DKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
           ALI  Y+ +G+ + A+ +   M+    + +VI+W  L++G    G   +A+     M   
Sbjct: 88  ALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMHSE 147

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
           G  PD   VS  LSA  ++  +  G+QVH   +K+G      V  +L+ +Y KCG  ++ 
Sbjct: 148 GFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEI 207

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
            RVF      DV +  AL+ G ++N +  EAL  + + + RG + + +++  ++  C   
Sbjct: 208 VRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQN 267

Query: 552 GLAENARWYFESMDKVYGIKPGPDHYAC-------------------------------- 579
           G    A   F +M  + G++P      C                                
Sbjct: 268 GRDLEAVDLFRTMQSI-GVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYV 326

Query: 580 ---MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGD 621
              ++D+  + GK   A+ + D M    +   W A++    +HGD
Sbjct: 327 GSALVDMYAKCGKARHARTIFDAMPSR-NVVSWNAMIGGYAMHGD 370



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 104/250 (41%), Gaps = 45/250 (18%)

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
           S+  +L +F  +R     PD  ++ S L +C         + +HA  + SG      V +
Sbjct: 2   SHSNSLYHF--LRHVSFPPDPHLLPSALKSC---PAQPLARALHAAAVVSGLAEDPFVAS 56

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           SL+  Y + G    A  VFD M  ++V+ W+ALI G +  G  + A    +QM + G +P
Sbjct: 57  SLLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEP 116

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           + IT+ GL                                    +  L RSG+ ++A   
Sbjct: 117 NVITWNGL------------------------------------VSGLNRSGRALDAVTA 140

Query: 597 LDQMVGE---PDATVWKALLSACRVHGDLELGERAANNLFELE-PMNAMPYVQLSNMYST 652
           L +M  E   PDAT     LSA     ++ +G++    + +    ++A     L +MY  
Sbjct: 141 LVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGK 200

Query: 653 AGKWEDAARV 662
            G+ ++  RV
Sbjct: 201 CGRADEIVRV 210


>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Glycine max]
          Length = 721

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 245/640 (38%), Positives = 369/640 (57%), Gaps = 10/640 (1%)

Query: 172 TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV 231
           T ++  YA+   + EA  LF+  P  K+ V+W ++I G    G    A + F +M    V
Sbjct: 90  TIMLHAYAQNHRLREAIDLFRRIP-FKDVVSWNSIIKGCLHCGDIVTARKLFDEMPRRTV 148

Query: 232 ESNQFTFPSILTACAAVSARD-FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
            S       +L       A   F A           + +V   +A+I  Y   G +D A 
Sbjct: 149 VSWTTLVDGLLRLGIVQEAETLFWAM-------EPMDRDVAAWNAMIHGYCSNGRVDDAL 201

Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
           +L       + +SW+SMI G    G  ++AL LF+ M A  + +        L+  A   
Sbjct: 202 QLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCLSSGVLVCGLSAAAKIP 261

Query: 351 DLNNAKSVHSLIVKTG-FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
                  +H  + K G +   +FV+ +L+  YA    ++ A  VF  +  K V+ WT+L+
Sbjct: 262 AWRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACRVFGEVVYKSVVIWTALL 321

Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
           TG   +  + EAL+ F +M    + P+    +S L++C  L  +E G+ +HA  +K G  
Sbjct: 322 TGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMGLE 381

Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
           S   V  SLV++Y+KCG ++DA  VF  ++ ++V++W ++I+GCAQ+G G  AL  ++QM
Sbjct: 382 SGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGMWALALFNQM 441

Query: 530 LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGK 589
           L  G  PD IT  GLL ACSH+G+ + AR +F    +   +    +HY  M+D+LGR G+
Sbjct: 442 LREGVDPDGITVTGLLSACSHSGMLQKARCFFRYFGQKRSVTLTIEHYTSMVDVLGRCGE 501

Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNM 649
           L EA+A++  M  + ++ VW ALLSACR H +L+L +RAAN +FE+EP  +  YV LSN+
Sbjct: 502 LEEAEAVVMSMPMKANSMVWLALLSACRKHSNLDLAKRAANQIFEIEPDCSAAYVLLSNL 561

Query: 650 YSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEI 709
           Y+++ +W + A +R+ MK  G+ K+PG SW+    Q H F+S DR HPL   IY K++ +
Sbjct: 562 YASSSRWAEVALIRRKMKHNGVVKKPGSSWLTLKGQKHKFLSADRSHPLAEKIYQKLEWL 621

Query: 710 MLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVC 769
            + +KE GYVPD  FALH+VE E KE  L+YHSE+LA+AFGLL+  +G+ I + KNLRVC
Sbjct: 622 GVKLKELGYVPDQQFALHDVETEQKEEMLSYHSERLAIAFGLLSTVEGSAITVMKNLRVC 681

Query: 770 GDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           GDCH A+K ++ +  R I++RDS+RFH FK G CSCGDYW
Sbjct: 682 GDCHNAIKLMAKIVDREIVVRDSSRFHDFKNGICSCGDYW 721



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 144/496 (29%), Positives = 247/496 (49%), Gaps = 18/496 (3%)

Query: 48  NSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYG 107
           N+  +DEA  +F+++       +  M+ AYA + RLREA  LF   PFK+  +W+S+I G
Sbjct: 67  NNRSLDEARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDVVSWNSIIKG 126

Query: 108 YSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLN 167
             + G  + A +LF +M           +D +LRL    G++Q  E    +A++   D +
Sbjct: 127 CLHCGDIVTARKLFDEMPRRTVVSWTTLVDGLLRL----GIVQEAETLF-WAMEP-MDRD 180

Query: 168 AFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR 227
                 ++  Y     + +A  LF   P  ++ ++W++MI G   NG   +A+  FRDM 
Sbjct: 181 VAAWNAMIHGYCSNGRVDDALQLFCQMPS-RDVISWSSMIAGLDHNGKSEQALVLFRDMV 239

Query: 228 VEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG-FEANVYVQSALIDMYAKCGDL 286
             GV  +       L+A A + A   G Q+H  +   G +  + +V ++L+  YA C  +
Sbjct: 240 ASGVCLSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQM 299

Query: 287 DSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCF 346
           ++A R+       + V W +++ G+     H+EAL +F +M   D+  ++ ++ S LN  
Sbjct: 300 EAACRVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSC 359

Query: 347 ASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWT 406
               D+   K +H+  VK G E   +V  +L+ MY+K G +  A  VF  + +K+V+SW 
Sbjct: 360 CGLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKNVVSWN 419

Query: 407 SLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
           S+I GCA HG    AL  F+ M   G+ PD + V+ +LSAC+   +L   Q+    F   
Sbjct: 420 SVIVGCAQHGCGMWALALFNQMLREGVDPDGITVTGLLSACSHSGML---QKARCFFRYF 476

Query: 467 GGCSSLSVD----NSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKE 521
           G   S+++      S+V V  +CG + +A  V  SM  + + + W AL+  C ++     
Sbjct: 477 GQKRSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSMPMKANSMVWLALLSACRKHSNLDL 536

Query: 522 ALQFYDQMLARGTKPD 537
           A +  +Q+     +PD
Sbjct: 537 AKRAANQIFE--IEPD 550



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 109/443 (24%), Positives = 198/443 (44%), Gaps = 54/443 (12%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  +  + ++G +D+A QLF +M  RD  +W++MIA   ++G+  +A  LF +       
Sbjct: 185 NAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVC 244

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
             S ++    +    I A+ +  Q+    ++   +  D                      
Sbjct: 245 LSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDE--------------------- 283

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG--KNHVAWTTMITGYSQNGYGF 217
                    FV   LV  YA CK   + E   ++F +   K+ V WT ++TGY  N    
Sbjct: 284 ---------FVSASLVTFYAGCK---QMEAACRVFGEVVYKSVVIWTALLTGYGLNDKHR 331

Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
           +A+E F +M    V  N+ +F S L +C  +   + G  +H   +  G E+  YV  +L+
Sbjct: 332 EALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMGLESGGYVGGSLV 391

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
            MY+KCG +  A  + +     N VSWNS+IVG A+ G    AL+LF +M    +  D  
Sbjct: 392 VMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGMWALALFNQMLREGVDPDGI 451

Query: 338 TYPSVLNCFASNIDLNNAKSVHSLI-----VKTGFEGYKFVNNALIDMYAKQGNLDCA-F 391
           T   +L+  + +  L  A+           V    E Y     +++D+  + G L+ A  
Sbjct: 452 TVTGLLSACSHSGMLQKARCFFRYFGQKRSVTLTIEHY----TSMVDVLGRCGELEEAEA 507

Query: 392 MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD----HVVVSSILSAC 447
           +V ++    + + W +L++ C  H + + A +  +  +I  I PD    +V++S++ ++ 
Sbjct: 508 VVMSMPMKANSMVWLALLSACRKHSNLDLAKR--AANQIFEIEPDCSAAYVLLSNLYASS 565

Query: 448 ---AELTVLEFGQQVHAVFLKSG 467
              AE+ ++    + + V  K G
Sbjct: 566 SRWAEVALIRRKMKHNGVVKKPG 588



 Score = 43.5 bits (101), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 14/129 (10%)

Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
           +++A  +FD + T  V  +T ++   AQN + +EA+  + ++  +    D +++  ++  
Sbjct: 71  LDEARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFK----DVVSWNSIIKG 126

Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP--- 604
           C H G    AR  F+ M +   +      +  ++D L R G + EA+ L   M  EP   
Sbjct: 127 CLHCGDIVTARKLFDEMPRRTVVS-----WTTLVDGLLRLGIVQEAETLFWAM--EPMDR 179

Query: 605 DATVWKALL 613
           D   W A++
Sbjct: 180 DVAAWNAMI 188


>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Vitis vinifera]
          Length = 610

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 225/601 (37%), Positives = 349/601 (58%), Gaps = 33/601 (5%)

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           L ACA   +   G ++H  I+ +G +    + + LI+MY KCG +  A  L       + 
Sbjct: 10  LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDP 69

Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
           +SW S++    +       LS+F  M  +D ++ D + +  ++   A    +   K VH+
Sbjct: 70  ISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHA 129

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
             + +       V ++L+DMYAK G  D   +VF+ +  K+ ISWT++I+G A  G   +
Sbjct: 130 TFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLD 189

Query: 421 ALKYFSDMR----------ISGICP----------------------DHVVVSSILSACA 448
           A++ F  M           ISG+                        D  ++SSI+ A A
Sbjct: 190 AIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASA 249

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
            L VL  G+Q+H + +  G  SSL V N+LV +YAKC  +  A ++F  M  RD+++WT+
Sbjct: 250 NLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTS 309

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
           +I+G AQ+G  +EAL  Y++ML+ G KP+ +TFVGL++ACSH GL    R++F SM K Y
Sbjct: 310 IIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDY 369

Query: 569 GIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
           GI P   HY C++DLL RSG L EA+ L+  M  +PD   W ALLSAC  H +  +G R 
Sbjct: 370 GINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGIRV 429

Query: 629 ANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHI 688
           A++L  L+P +   Y+ LSN+Y++A  WE  ++VR+LM +  ++KEPG S +    +  +
Sbjct: 430 ADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVLGKESQV 489

Query: 689 FISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVA 748
           F++ +  HP + +I+  ++E+   +K+ GY+PD +  LH++E++ KE  L +HSE+LAVA
Sbjct: 490 FLAGETSHPAKEEIFGLLEELDAEMKKRGYIPDTSSVLHDLEQQEKERQLFWHSERLAVA 549

Query: 749 FGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDY 808
           +GLL    G  + I KNLRVCGDCHT +K+IS +  R I++RD+NR+HHFK G CSC ++
Sbjct: 550 YGLLKGIPGMVLHIVKNLRVCGDCHTVLKFISIIVKREIVVRDANRYHHFKDGKCSCNNF 609

Query: 809 W 809
           W
Sbjct: 610 W 610



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 132/486 (27%), Positives = 234/486 (48%), Gaps = 59/486 (12%)

Query: 152 GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYS 211
           G++ H + IKT  D    +   L++MY KC  I +A  LF   P  ++ ++W +++T  +
Sbjct: 22  GKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPH-RDPISWASILTANN 80

Query: 212 QNGYGFKAIECFRDM-RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV 270
           Q       +  F  M + +G++ + + F  ++ ACA + A   G QVH   + S    + 
Sbjct: 81  QANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDD 140

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
            V+S+L+DMYAKCG  D  R + +     N +SW +MI G+A+ G   +A+ LF+KM  +
Sbjct: 141 VVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVK 200

Query: 331 DIK--------------------------------IDDFTYPSVLNCFASNIDLNNAKSV 358
           ++                                 +D F   S++   A+   L   K +
Sbjct: 201 NLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQI 260

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           H L++  G+E   FV+NAL+DMYAK  ++  A  +F  M  +D++SWTS+I G A HG  
Sbjct: 261 HCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLA 320

Query: 419 EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNS 477
           EEAL  ++ M  +G+ P+ V    ++ AC+ + ++  G+      +K  G + SL     
Sbjct: 321 EEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTC 380

Query: 478 LVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQMLA-RGTK 535
           L+ + ++ G + +A  +  +M  + D  TW AL+  C  +      ++  D +L+ +   
Sbjct: 381 LLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSLKPED 440

Query: 536 PDYITFVGLLFACSHAGLAENARWYFESMDKVYGI--------KPGPDHYACMIDLLGRS 587
           P     +  ++A +       A W  ES+ KV  +        +PG   Y+C++  LG+ 
Sbjct: 441 PSTYILLSNIYASA-------AMW--ESVSKVRRLMAAMEVKKEPG---YSCIV--LGKE 486

Query: 588 GKLIEA 593
            ++  A
Sbjct: 487 SQVFLA 492



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 188/380 (49%), Gaps = 36/380 (9%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM-QLEGY 129
           N +I  Y   G +++A  LFN+ P ++  +W+S++   +   L      +F  M + +G 
Sbjct: 42  NNLINMYGKCGLIQDALNLFNQLPHRDPISWASILTANNQANLPHLTLSMFPAMFKQDGL 101

Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
           +P  Y    +++ C++ G +++G+Q H   I +    +  V + LVDMYAKC        
Sbjct: 102 QPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRV 161

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES---------------- 233
           +F      KN ++WT MI+GY+Q+G    AI+ F+ M V+ + S                
Sbjct: 162 VFDSI-SSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVD 220

Query: 234 ----------------NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
                           + F   SI+ A A ++    G Q+H  ++  G+E++++V +AL+
Sbjct: 221 SFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALV 280

Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
           DMYAKC D+ +A+++       + VSW S+IVG A+ G  +EALSL+ +M +  +K ++ 
Sbjct: 281 DMYAKCSDVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEV 340

Query: 338 TYPSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
           T+  ++  C    +        +S+I   G          L+D+ ++ G+L+ A  +   
Sbjct: 341 TFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKA 400

Query: 397 MQDK-DVISWTSLITGCAYH 415
           M  K D  +W +L++ C +H
Sbjct: 401 MPFKPDEATWAALLSACNHH 420



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 148/283 (52%), Gaps = 8/283 (2%)

Query: 33  VKPASD---LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKK 88
           V P SD   +  +LVD ++  G  D    +F+ +S ++  +W  MI+ YA SGR  +A +
Sbjct: 133 VSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLDAIQ 192

Query: 89  LFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR-PSQYTLDNVLRLCSLKG 147
           LF + P KN  +W++LI G    G  +++F LF +M+ +G      + L +++   +   
Sbjct: 193 LFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLA 252

Query: 148 LLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
           +L  G+Q H   I   ++ + FV   LVDMYAKC  +  A+ +F      ++ V+WT++I
Sbjct: 253 VLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQ-RDIVSWTSII 311

Query: 208 TGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GF 266
            G +Q+G   +A+  +  M   G++ N+ TF  ++ AC+ V     G      ++   G 
Sbjct: 312 VGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGI 371

Query: 267 EANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
             ++   + L+D+ ++ G L+ A  L++      +E +W +++
Sbjct: 372 NPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALL 414



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 113/245 (46%), Gaps = 18/245 (7%)

Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
           +C  H+V    L ACA       G+++H   +K+G     S+ N+L+ +Y KCG I DA 
Sbjct: 1   MCYSHLVYQ--LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDAL 58

Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR-GTKPDYITFVGLLFACSHA 551
            +F+ +  RD I+W +++    Q       L  +  M  + G +PD+  F  L+ AC+  
Sbjct: 59  NLFNQLPHRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAIL 118

Query: 552 GLAENARWYFESMDKVYGIKPGPDH---YACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
           G  +  +     +   + + P  D     + ++D+  + G     + + D  +   ++  
Sbjct: 119 GAMKQGK----QVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDS-ISSKNSIS 173

Query: 609 WKALLSACRVHGDLELGERA-ANNLFELEPM-NAMPYVQLSNMYSTAGKWEDAARVRKLM 666
           W A++S     G  + G +  A  LF+  P+ N + +  L +    +G W D+  +   M
Sbjct: 174 WTAMIS-----GYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEM 228

Query: 667 KSRGI 671
           +S+GI
Sbjct: 229 RSKGI 233


>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 726

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 230/652 (35%), Positives = 366/652 (56%), Gaps = 33/652 (5%)

Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR-VEGVESNQFTFPSILTACAAV 248
           +F   P+   H +   ++   S++ +  K I  + ++R +     ++F+FPS+L A + V
Sbjct: 76  VFSQIPNPHTHFS-NQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKV 134

Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
           SA + G ++HG     GF  + ++Q+ LI MYA C  +  AR L +     + V+WN +I
Sbjct: 135 SAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMII 194

Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
            G+ + G + +AL LF+ M + D+K D     +VL+      +L+  +++H  +   G+ 
Sbjct: 195 DGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYA 254

Query: 369 GYKFVNNALIDMYAKQGNLDCAF-------------------------------MVFNLM 397
               +  ALI+MYA  G +D A                                 +F+ M
Sbjct: 255 IDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQM 314

Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
            ++D++ W+++I+G A     +EALK F +M      PD + + S++SAC+ +  L    
Sbjct: 315 IERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQAN 374

Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
            +H    +SG   +LSV+N+L+ +YAKCG +  A  VF++M  ++VI+W+++I   A +G
Sbjct: 375 WIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHG 434

Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY 577
               A++ + +M     +P+ +TF+G+L+AC HAGL E     F SM   +GI P  +HY
Sbjct: 435 NADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHY 494

Query: 578 ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEP 637
            CM+DL  R+  L +A  L++ M   P+  +W +L+SAC+VHG+ ELGE AA  L ELEP
Sbjct: 495 GCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEP 554

Query: 638 MNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHP 697
            +    V LSN+Y+   +W D   +RK M  +GI KE   S +E N+QVH+F+  DR H 
Sbjct: 555 DHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHK 614

Query: 698 LRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQG 757
              +IY K+DE++  +K  GY P  +  L ++EEE K+  + +HSEKLAV +GL++    
Sbjct: 615 QSDEIYEKLDEVVSKLKLVGYKPSTSGILIDLEEEDKKELVLWHSEKLAVCYGLISRRNE 674

Query: 758 APIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           + IRI KNLR+C DCH+ MK +S VY   I++RD  RFHH   G CSC DYW
Sbjct: 675 SCIRIVKNLRICEDCHSFMKLVSKVYQIEIVVRDRTRFHHCSGGICSCRDYW 726



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/468 (28%), Positives = 229/468 (48%), Gaps = 39/468 (8%)

Query: 89  LFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ-LEGYRPSQYTLDNVLRLCSLKG 147
           +F++ P  +    + L+   S      +   L+  ++ +  +   +++  ++L+  S   
Sbjct: 76  VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135

Query: 148 LLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF-KM-FPDGKNHVAWTT 205
               G + HG A K  F  + F+ TGL+ MYA C+ I +A  LF KM  PD    VAW  
Sbjct: 136 AFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDA---VAWNM 192

Query: 206 MITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG 265
           +I GY QNG+   A+  F DMR   ++ +     ++L+AC       +G  +H  +  +G
Sbjct: 193 IIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNG 252

Query: 266 FEANVYVQSALIDMYAKCGDLDSARRLLE----------------YSEI----------- 298
           +  + ++Q+ALI+MYA CG +D AR++ +                Y+++           
Sbjct: 253 YAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFD 312

Query: 299 ----DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN 354
                + V W++MI G+A     +EAL LF +M  +    D  T  SV++  +    L  
Sbjct: 313 QMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQ 372

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
           A  +H+ + ++GF     VNNALIDMYAK GNL  A  VF  M  K+VISW+S+I   A 
Sbjct: 373 ANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAM 432

Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
           HG+ + A+K F  M+   I P+ V    +L AC    ++E G+++ +  +   G S    
Sbjct: 433 HGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTRE 492

Query: 475 D-NSLVLVYAKCGCINDANRVFDSM-HTRDVITWTALIMGCAQNGKGK 520
               +V +Y +   +  A  + ++M    +VI W +L+  C  +G+ +
Sbjct: 493 HYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAE 540



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 193/415 (46%), Gaps = 40/415 (9%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F    +IA YA+  R+ +A+ LF++    +   W+ +I GY   G   +A  LF  M+
Sbjct: 155 DPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMR 214

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC-- 183
               +P    L  VL  C   G L  G   H +     + +++ + T L++MYA C    
Sbjct: 215 SSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMD 274

Query: 184 -----------------------------IFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
                                        + +A ++F    + ++ V W+ MI+GY+++ 
Sbjct: 275 LARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIE-RDLVCWSAMISGYAESD 333

Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQS 274
              +A++ F +M  +    +Q T  S+++AC+ V A      +H  +  SGF   + V +
Sbjct: 334 QPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNN 393

Query: 275 ALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKI 334
           ALIDMYAKCG+L  AR + E     N +SW+SMI  FA  G    A+ LF++M   +I+ 
Sbjct: 394 ALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEP 453

Query: 335 DDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
           +  T+  VL  C  + +     K   S+I + G    +     ++D+Y +   L  A  +
Sbjct: 454 NGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIEL 513

Query: 394 FNLMQ-DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH----VVVSSI 443
              M    +VI W SL++ C  HG  E  L  F+  R+  + PDH    VV+S+I
Sbjct: 514 IETMPFAPNVIIWGSLMSACQVHG--EAELGEFAAKRLLELEPDHDGALVVLSNI 566



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 140/275 (50%), Gaps = 4/275 (1%)

Query: 37  SDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF 95
           S L  AL++ ++N G +D A ++++ +S +       M++ YA  G +++A+ +F++   
Sbjct: 257 SHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIE 316

Query: 96  KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
           ++   WS++I GY+      EA +LF +M  +   P Q T+ +V+  CS  G L +    
Sbjct: 317 RDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWI 376

Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGY 215
           H Y  ++ F     V   L+DMYAKC  + +A  +F+  P  KN ++W++MI  ++ +G 
Sbjct: 377 HTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPR-KNVISWSSMINAFAMHGN 435

Query: 216 GFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQS 274
              AI+ FR M+   +E N  TF  +L AC      + G ++   +++  G         
Sbjct: 436 ADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYG 495

Query: 275 ALIDMYAKCGDLDSARRLLEYSEI-DNEVSWNSMI 308
            ++D+Y +   L  A  L+E      N + W S++
Sbjct: 496 CMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLM 530


>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
          Length = 677

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 219/607 (36%), Positives = 344/607 (56%), Gaps = 5/607 (0%)

Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
           W  +++ +S+ G    A+  FR +       N  TF   LTACA +   D    V     
Sbjct: 76  WNGLLSAHSRAGAPGAALRVFRAL-PSSARPNSTTFTLTLTACARLGDLDAAESVRVRAF 134

Query: 263 SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
           ++G+  +V+V SAL+ +Y++CG ++ A R+ +     + V+W++M+ GF   G   EAL+
Sbjct: 135 AAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALA 194

Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYA 382
           ++ +M    +  D+     V+    S  +     SVH  +++           +L+ MYA
Sbjct: 195 MYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYA 254

Query: 383 KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSS 442
           K G+LD A  VF +M  ++ ++W++LI+G A +G   EAL  F +++  G+ P    + S
Sbjct: 255 KNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALVS 314

Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
            L ACA +  L+ G+ +H   L+      + +  +++ +Y+KCG +  A ++F+ + +RD
Sbjct: 315 ALLACASVGFLKLGKSIHGFILRRLEWQCI-LGTAVLDMYSKCGSLESARKLFNKLSSRD 373

Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
           ++ W A+I  C  +G G +AL  + ++   G KPD+ TF  LL A SH+GL E  +++F+
Sbjct: 374 LVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFD 433

Query: 563 SMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDL 622
            M K +GI+P   HY C++DLL RSG + EA  +L  M  EP   +W  LLS C  +  L
Sbjct: 434 RMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGCLNNKKL 493

Query: 623 ELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVET 682
           ELGE  A  + EL P +      +SN+Y+ A KW+    +RKLMK  G +K PG S +E 
Sbjct: 494 ELGETIAKKILELRPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEV 553

Query: 683 NSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHS 742
               H F+ ED+ HP   +I   + ++   +++ GYVP   F  H+++E+     L+YHS
Sbjct: 554 KGTRHAFVMEDQSHPQHREILKMVAKLNSEMRKLGYVPRTEFVYHDLDEDQL---LSYHS 610

Query: 743 EKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGN 802
           E+LA+AFGLL    G  + I KNLRVCGDCH A+KYIS +  R I++RD+ RFHHFK G 
Sbjct: 611 ERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKDGA 670

Query: 803 CSCGDYW 809
           CSCGDYW
Sbjct: 671 CSCGDYW 677



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 207/410 (50%), Gaps = 10/410 (2%)

Query: 11  FSLRCRSKIIGPA-RYTHNVGNSVKP-ASDLNRALVDFSNSGEIDEAGQL----FEKMSD 64
            S   R+   G A R    + +S +P ++     L   +  G++D A  +    F     
Sbjct: 80  LSAHSRAGAPGAALRVFRALPSSARPNSTTFTLTLTACARLGDLDAAESVRVRAFAAGYG 139

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
            D F  + ++  Y+  G + EA ++F+  P K+   WS+++ G+   G  +EA  ++ +M
Sbjct: 140 HDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALAMYSRM 199

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
           +  G    +  +  V++ C   G  + G   HG  ++ C  ++    T LV MYAK   +
Sbjct: 200 REHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYAKNGHL 259

Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
             A  +F+M P  +N V W+ +I+G++QNG   +A++ FR+++ +G++   +   S L A
Sbjct: 260 DVACQVFRMMPY-RNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALVSALLA 318

Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
           CA+V     G  +HG IL    E    + +A++DMY+KCG L+SAR+L       + V W
Sbjct: 319 CASVGFLKLGKSIHGFILRR-LEWQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLW 377

Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
           N++I      G   +AL+LF++++   IK D  T+ S+L+  + +  +   K     ++K
Sbjct: 378 NAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMIK 437

Query: 365 T-GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGC 412
             G E  +     ++D+ A+ G ++ A  +   MQ +  I+ W  L++GC
Sbjct: 438 EFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGC 487



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 174/357 (48%), Gaps = 16/357 (4%)

Query: 271 YVQSALIDMYAKCGDLDSARRLL--EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH 328
           ++ S+L   YA+ G LD+A   L    S   +  +WN ++   +R G    AL +F+ + 
Sbjct: 41  HILSSLAAAYARAGALDAAESTLAASPSSPSSIAAWNGLLSAHSRAGAPGAALRVFRALP 100

Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD 388
           +   + +  T+   L   A   DL+ A+SV       G+    FV +AL+ +Y++ G ++
Sbjct: 101 S-SARPNSTTFTLTLTACARLGDLDAAESVRVRAFAAGYGHDVFVCSALLHLYSRCGAME 159

Query: 389 CAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
            A  VF+ M  KD ++W++++ G    G   EAL  +S MR  G+  D VV+  ++ AC 
Sbjct: 160 EAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALAMYSRMREHGVSDDEVVMVGVIQACM 219

Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
                  G  VH   L+      +    SLV +YAK G ++ A +VF  M  R+ +TW+A
Sbjct: 220 STGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYAKNGHLDVACQVFRMMPYRNDVTWSA 279

Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
           LI G AQNG+  EAL  + ++ A G +P     V  L AC+  G       + +    ++
Sbjct: 280 LISGFAQNGRAVEALDLFRELQADGLQPCSWALVSALLACASVG-------FLKLGKSIH 332

Query: 569 GIKPGPDHYACM-----IDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
           G       + C+     +D+  + G L  A+ L +++    D  +W A+++ C  HG
Sbjct: 333 GFILRRLEWQCILGTAVLDMYSKCGSLESARKLFNKLSSR-DLVLWNAIIACCGTHG 388


>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 622

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 232/611 (37%), Positives = 357/611 (58%), Gaps = 36/611 (5%)

Query: 232 ESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK--CGDLDSA 289
           ESN      +L  C+ +       Q+HG +L +G   +    S L+   A    G L  A
Sbjct: 15  ESNAAQTLHLLQRCSNMEELR---QIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYA 71

Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
           R + +     N   WN+MI G++     +EAL L+  M    +  + +T+P +L   +S 
Sbjct: 72  RTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSM 131

Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL---------------------- 387
             L   + +H+ I+K GF    +  N+L+++Y+K G++                      
Sbjct: 132 SALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMI 191

Query: 388 ---------DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
                    + A+ +FN M ++++ISWTS+I+GC   G  +EAL  F  M+ +GI  D+V
Sbjct: 192 DGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNV 251

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
            + S L ACA+L VL+ G+ +HA   K        +   L+ +YAKCG + +A  VF  M
Sbjct: 252 ALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKM 311

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENAR 558
             + V  WTA+I G A +G+G+EAL+++ +M   G +P+ +TF G+L ACSHAGL   A+
Sbjct: 312 EEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAK 371

Query: 559 WYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRV 618
             FESM++++G KP  +HY CM+DLLGR+G L EA+ L++ M  +P+A +W ALL+AC +
Sbjct: 372 LLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHI 431

Query: 619 HGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCS 678
           HG+LELG++    L +++P +   Y+ L+++++ AG+W  AARVR+ MK +G+ K PGCS
Sbjct: 432 HGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCS 491

Query: 679 WVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGL 738
            +  N   H F++ D  HP   +I   +++I+  ++E GY P +   L ++E++ KE  +
Sbjct: 492 VISVNGTAHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETAI 551

Query: 739 AYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHF 798
            +HSEKLAV FGL++   G  IRI KNLRVC DCHT +K IS VY R I++RD  RFH F
Sbjct: 552 HHHSEKLAVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHLF 611

Query: 799 KAGNCSCGDYW 809
           K GNC+CGDYW
Sbjct: 612 KDGNCTCGDYW 622



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 206/429 (48%), Gaps = 42/429 (9%)

Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC- 183
           QL     +  TL  + R  +++ L     Q HG  +KT   L+    + L+   A     
Sbjct: 11  QLSSESNAAQTLHLLQRCSNMEEL----RQIHGQMLKTGLILDEIPASKLLAFCASPNSG 66

Query: 184 -IFEAEYLF-KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
            +  A  +F ++F    N   W TMI GYS +    +A+  +  M    V  N +TFP +
Sbjct: 67  SLAYARTVFDRIFR--PNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFL 124

Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
           L AC+++SA +   Q+H  I+  GF + +Y  ++L+++Y+K GD+ SAR L +  +  + 
Sbjct: 125 LKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT 184

Query: 302 VSWNSMIVGFAR-------------------------------QGFHKEALSLFKKMHAR 330
           VSWNSMI G+ +                                G  KEAL+LF +M   
Sbjct: 185 VSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTA 244

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
            IK+D+    S L   A    L+  K +H+ I K   E    +   LIDMYAK G+L+ A
Sbjct: 245 GIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEA 304

Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
             VF  M++K V  WT++I+G A HG   EAL++F  M+ +G+ P+ +  + IL+AC+  
Sbjct: 305 IEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHA 364

Query: 451 TVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTA 508
            ++   + +     +  G   S+     +V +  + G + +A  + ++M  + +   W A
Sbjct: 365 GLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGA 424

Query: 509 LIMGCAQNG 517
           L+  C  +G
Sbjct: 425 LLNACHIHG 433



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/277 (32%), Positives = 141/277 (50%), Gaps = 15/277 (5%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           N  L  +S SG+I  A  LF+++  RD  +WN+MI  Y   G +  A ++FN  P +N  
Sbjct: 157 NSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNII 216

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           +W+S+I G    G   EA  LF +MQ  G +     L + L+ C+  G+L +G+  H Y 
Sbjct: 217 SWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYI 276

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
            K   +++  +   L+DMYAKC  + EA  +F+   + K    WT MI+GY+ +G G +A
Sbjct: 277 KKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEE-KGVSVWTAMISGYAIHGRGREA 335

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL-------SSGFEANVYV 272
           +E F  M+  GVE NQ TF  ILTAC+          VH   L         GF+ ++  
Sbjct: 336 LEWFMKMQTAGVEPNQMTFTGILTACS------HAGLVHEAKLLFESMERIHGFKPSIEH 389

Query: 273 QSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
              ++D+  + G L  A  L+E   +  N   W +++
Sbjct: 390 YGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALL 426



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 180/409 (44%), Gaps = 37/409 (9%)

Query: 47  SNSGEIDEA-GQLFEKMSDRDGFTWNTMIA--AYANSGRLREAKKLFNETPFKNFFTWSS 103
           SN  E+ +  GQ+ +     D    + ++A  A  NSG L  A+ +F+     N F W++
Sbjct: 29  SNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNT 88

Query: 104 LIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC 163
           +I GYSN     EA  L+  M       + YT   +L+ CS    L+  +Q H + IK  
Sbjct: 89  MIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMG 148

Query: 164 FD---------LNAFVVTG----------------------LVDMYAKCKCIFEAEYLFK 192
           F          LN +  +G                      ++D Y KC  I  A  +F 
Sbjct: 149 FGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFN 208

Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
             P+ +N ++WT+MI+G    G   +A+  F  M+  G++ +     S L ACA +   D
Sbjct: 209 HMPE-RNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLD 267

Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
            G  +H  I     E +  +   LIDMYAKCGDL+ A  +    E      W +MI G+A
Sbjct: 268 QGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYA 327

Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV-HSLIVKTGFEGYK 371
             G  +EAL  F KM    ++ +  T+  +L   +    ++ AK +  S+    GF+   
Sbjct: 328 IHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSI 387

Query: 372 FVNNALIDMYAKQGNL-DCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
                ++D+  + G L +   ++ N+    +   W +L+  C  HG+ E
Sbjct: 388 EHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLE 436


>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 922

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 246/740 (33%), Positives = 404/740 (54%), Gaps = 11/740 (1%)

Query: 72  TMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRP 131
            +I  Y   G L  A+K+FNE   +N  +W+++I GY  +G   EAF LF ++   G +P
Sbjct: 192 ALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQP 251

Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
           ++ +  ++L  C+    L++G + H Y  +   +    V   L+ MYA+C  +  A  +F
Sbjct: 252 NKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVF 311

Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
                  N V+W  MI GY + G+  +A   FRDM+ +G + ++FT+ S+L  CA  +  
Sbjct: 312 DNL-RSPNRVSWNAMIAGYGE-GFMEEAFRLFRDMQQKGFQPDRFTYASLLAICADRADL 369

Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
           + G ++H  I+ + +EA+V V +ALI MYAKCG L+ AR++       N VSWN+ I   
Sbjct: 370 NRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACC 429

Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
            R G  KEA  +FK+M   D+  D  T+ ++LN   S  D    + +H  I + G     
Sbjct: 430 CRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNN 489

Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
            V NALI MY + G L  A  VF  ++ +D+ SW ++I     HG+   A   F   +  
Sbjct: 490 LVANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSE 549

Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
           G   D     ++L A A L  L+ G+++H +  K+G    + +  +L+ +Y+KCG + DA
Sbjct: 550 GGKGDKYTFINVLRAIANLEDLDAGRKIHGLVEKAGLEKDIRILTTLIKMYSKCGSLRDA 609

Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
             VF ++  +DV+ W A++     +  G++AL+ + QM   G  PD  T+  +L AC+  
Sbjct: 610 YSVFKNVQEKDVVCWNAMLAAYNHSDHGQDALKLFQQMRLEGVNPDSATYTSVLNACARL 669

Query: 552 GLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKA 611
           G  E+ +  F +  K   ++    HYACM+  LGR+  L EA+  ++++  E DA +W++
Sbjct: 670 GAIEHGK-KFHTQLKEAAMETDTRHYACMVAALGRASLLKEAEEFIEEISSESDALMWES 728

Query: 612 LLSACRVHGDLELGERAANNLFELEPMNAMPYV--QLSNMYSTAGKWEDAARVRKLMKSR 669
           LL ACR+H ++ L E A  +L +++  ++ P V  QL N+Y+ AG+WED + ++  M+  
Sbjct: 729 LLVACRIHHNVGLAETAVEHLLDVKAQSS-PAVCEQLMNIYAAAGRWEDVSVIKATMREA 787

Query: 670 GIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNV 729
           G+     C+ +E NS+ H F++ +   P +  +  KI+E++  + + G++ D ++A ++ 
Sbjct: 788 GLLAPKSCT-IEVNSEFHTFMT-NHFSP-QIGVEDKIEELVWKMMDKGFLLDPHYAPNDS 844

Query: 730 EEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIIL 789
            E  KE   ++  E LAVA+GL   P G  +R   +  V    H  +K+IS  Y R I +
Sbjct: 845 RE--KERLFSHCPELLAVAYGLEHTPPGVLVRCVTDSPVTDPSHRMLKFISKAYNRGIFV 902

Query: 790 RDSNRFHHFKAGNCSCGDYW 809
           RD N FH+FK G CSCGDYW
Sbjct: 903 RDPNCFHNFKDGICSCGDYW 922



 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 189/550 (34%), Positives = 300/550 (54%), Gaps = 4/550 (0%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D +  N +I+ Y+  G + +A  +F     K+  +W+++I GY+ +G   EA +LF+QMQ
Sbjct: 85  DIYLNNMLISMYSKCGSIEDANNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQ 144

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
            EG +P+Q +  ++L  C    +L+ GEQ H +  K  ++ +  V T L++MY KC  + 
Sbjct: 145 REGLKPNQNSFISILSACQTPIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLE 204

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A  +F    + +N V+WT MI+GY Q+G   +A   F+ +   G + N+ +F SIL AC
Sbjct: 205 LARKVFNEMRE-RNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGAC 263

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
              +  + G ++H  I  +G E  V V +ALI MYA+CG L +AR++ +     N VSWN
Sbjct: 264 TNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWN 323

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           +MI G+  +GF +EA  LF+ M  +  + D FTY S+L   A   DLN  K +HS IV+T
Sbjct: 324 AMIAGYG-EGFMEEAFRLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRT 382

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
            +E    V  ALI MYAK G+L+ A  VFN M +K+ +SW + I  C  HGS +EA + F
Sbjct: 383 AWEADVTVATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVF 442

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
             MR   + PDHV   ++L++C      E G+ +H    + G  S+  V N+L+ +Y +C
Sbjct: 443 KQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRC 502

Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
           G + DA  VF  +  RD+ +W A+I    Q+G    A   + +  + G K D  TF+ +L
Sbjct: 503 GKLADAREVFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVL 562

Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
            A ++    +  R     ++K  G++        +I +  + G L +A ++    V E D
Sbjct: 563 RAIANLEDLDAGRKIHGLVEKA-GLEKDIRILTTLIKMYSKCGSLRDAYSVFKN-VQEKD 620

Query: 606 ATVWKALLSA 615
              W A+L+A
Sbjct: 621 VVCWNAMLAA 630



 Score =  295 bits (755), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 165/500 (33%), Positives = 277/500 (55%), Gaps = 7/500 (1%)

Query: 124 MQLEGYRPSQYTLD---NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK 180
           +QL G R  Q  L+     L+ C     L  G++ H +     F+ + ++   L+ MY+K
Sbjct: 39  VQLLGKRGVQANLNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSK 98

Query: 181 CKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
           C  I +A  +F+   D K+ V+W  MI+GY+ +G G +A++ F  M+ EG++ NQ +F S
Sbjct: 99  CGSIEDANNVFQSMED-KDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFIS 157

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           IL+AC      +FG Q+H  I  +G+E++V V +ALI+MY KCG L+ AR++       N
Sbjct: 158 ILSACQTPIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERN 217

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
            VSW +MI G+ + G  KEA  LF+K+     + +  ++ S+L    +  DL     +H+
Sbjct: 218 VVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHA 277

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
            I + G E    V NALI MYA+ G+L  A  VF+ ++  + +SW ++I G    G  EE
Sbjct: 278 YIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYG-EGFMEE 336

Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
           A + F DM+  G  PD    +S+L+ CA+   L  G+++H+  +++   + ++V  +L+ 
Sbjct: 337 AFRLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALIS 396

Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
           +YAKCG + +A +VF+ M  ++ ++W A I  C ++G  KEA Q + QM      PD++T
Sbjct: 397 MYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVT 456

Query: 541 FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
           F+ LL +C+     E  R+    +D+ +G+         +I + GR GKL +A+ +  + 
Sbjct: 457 FITLLNSCTSPEDFERGRYIHGKIDQ-WGMLSNNLVANALISMYGRCGKLADAREVFYR- 514

Query: 601 VGEPDATVWKALLSACRVHG 620
           +   D   W A+++A   HG
Sbjct: 515 IRRRDLGSWNAMIAAYVQHG 534


>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Brachypodium distachyon]
          Length = 782

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 248/753 (32%), Positives = 408/753 (54%), Gaps = 11/753 (1%)

Query: 61  KMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFEL 120
           ++  + G +  +++ ++A +GR+ +A      +P  + F  + +I G+++ GL   A   
Sbjct: 37  RVRPKRGPSLKSLVLSHAAAGRMHDALAAVRSSP--DAFLHNVVIRGFADAGLPEAALAA 94

Query: 121 FWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG--LVDMY 178
           +  M   G RP ++T   V++ C+  G L+ G   H  AI+    + + V TG  L+  Y
Sbjct: 95  YRAMLAAGARPDRFTFPVVVKCCARLGALEEGRAAHSAAIRLGL-VGSEVYTGNSLLAFY 153

Query: 179 AKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG--VESNQF 236
           AK   + +AE +F   P  ++ V W +M+ GY  NG G  A++CFR+M  EG  V+ +  
Sbjct: 154 AKLGMVADAERVFDGMPV-RDIVTWNSMVDGYVSNGLGALALDCFREMH-EGLQVQHDGV 211

Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
              + L AC   SA   G +VH  ++  G E +V V ++L+DMY KCG + SA  +    
Sbjct: 212 GIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATM 271

Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
                V+WN MI G+A  G  +EA   F +M A   +++  T  ++L   A        +
Sbjct: 272 PSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGR 331

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
           SVH  + ++ F  +  +  AL++MY+K G +  +  +F  M +K ++SW ++I    Y  
Sbjct: 332 SVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKE 391

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
            Y EA+  F ++    + PD+  +S+++ A   L +L   +Q+H+  ++     +  V N
Sbjct: 392 MYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTN 451

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
           +++ +YA+CG +  + ++FD M  +DVI+W  +IMG A +G+GK AL+ + +M + G +P
Sbjct: 452 AVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQP 511

Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
           +  TFV +L ACS +G+A+     F  M + YGI P  +HY CM DLLGR+G L E    
Sbjct: 512 NESTFVSVLTACSVSGMADEGWIQFNLMQRDYGIIPQIEHYGCMTDLLGRAGDLREVLKF 571

Query: 597 LDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
           ++ +   P   +W +LL+A R   D+++ E AA  +FELE  N   YV LS+MY+ AG+W
Sbjct: 572 IESIPITPTFRIWGSLLTASRNRNDIDIAEYAAERIFELEHDNTGCYVILSSMYADAGRW 631

Query: 657 EDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA 716
           ED  R+R  M  +G+R+    S VE +     F++ D  HP    I+   D +   I E 
Sbjct: 632 EDVQRIRSSMMEKGLRRTDARSIVELHGSSCSFVNGDMTHPQSKTIHEVSDVLSRKIGET 691

Query: 717 GYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAM 776
            Y  +++  +       + I    HS +LAV FGL++    API + KN+R+C  CH A+
Sbjct: 692 DYPRNLSDPISLTSR--RTIIPNKHSVRLAVVFGLISSEARAPILVKKNVRICNHCHHAL 749

Query: 777 KYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           K IS    R I++ D+N +H F  G+C CGDYW
Sbjct: 750 KLISKYSRRRIVVGDTNIYHEFLDGSCCCGDYW 782



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 127/279 (45%), Gaps = 35/279 (12%)

Query: 35  PASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNET 93
           P   L  AL++ +S  G++  +  +F +M+++   +WN MIAAY         K+++NE 
Sbjct: 344 PHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMY-------KEMYNE- 395

Query: 94  PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE 153
                                  A  LF ++  +   P  +T+  V+    L GLL++  
Sbjct: 396 -----------------------AITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCR 432

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQN 213
           Q H Y ++  +  N  V   ++ MYA+C  +  +  +F     GK+ ++W T+I GY+ +
Sbjct: 433 QMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMA-GKDVISWNTIIMGYAIH 491

Query: 214 GYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG-AQVHGCILSSGFEANVYV 272
           G G  A+E F +M+  G++ N+ TF S+LTAC+     D G  Q +      G    +  
Sbjct: 492 GQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGIIPQIEH 551

Query: 273 QSALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIVG 310
              + D+  + GDL    + +E   I      W S++  
Sbjct: 552 YGCMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTA 590


>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
 gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 224/555 (40%), Positives = 330/555 (59%), Gaps = 22/555 (3%)

Query: 267 EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK 326
           E N    + L+  Y + G +  AR++ +     N VSW +MI G+ ++G  +EA  LF +
Sbjct: 22  ETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWR 81

Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
           M  R++     ++  +L     +  ++ A+ +  ++           +  +ID    +G 
Sbjct: 82  MPERNV----VSWTVMLGGLIEDGRVDEARQLFDMMPVKDV----VASTNMIDGLCSEGR 133

Query: 387 LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE-------------EALKYFSDMRISGI 433
           L  A  +F+ M  ++V++WTS+I+G    G++              EAL  FS M+  G+
Sbjct: 134 LIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGV 193

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
            P    V S+LS C  L  L+ G+QVH+  ++S     + V + L+ +Y KCG +  A R
Sbjct: 194 RPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKR 253

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGL 553
           VFD   ++D++ W ++I G AQ+G G++AL+ +  M +    PD ITF+G+L ACS+ G 
Sbjct: 254 VFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGK 313

Query: 554 AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
            +     FESM   Y + P  +HYACM+DLLGR+GKL EA  L++ M  E DA VW ALL
Sbjct: 314 VKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALL 373

Query: 614 SACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRK 673
            ACR H +L+L E AA  L +LEP NA PY+ LSN+YS+  +W+D   +RK M+++ +RK
Sbjct: 374 GACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVELRKTMRAKNLRK 433

Query: 674 EPGCSWVETNSQVHIFI-SEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEE 732
            PGCSW+E + +VHIF       HP    I  K+ ++  L++EAGY PD +F +H+V+EE
Sbjct: 434 SPGCSWIEVDKKVHIFSGGGSTSHPEHEMILKKLGKLGALLREAGYCPDGSFVMHDVDEE 493

Query: 733 GKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDS 792
            K   L  HSEKLAVA+GLL +P+G PIR+ KNLRVCGD H+ +K I+ V  R IILRD+
Sbjct: 494 EKVHSLRDHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDSHSTIKLIAQVTGREIILRDT 553

Query: 793 NRFHHFKAGNCSCGD 807
           NRFHHFK G CSC D
Sbjct: 554 NRFHHFKDGLCSCSD 568



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 229/449 (51%), Gaps = 38/449 (8%)

Query: 54  EAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGL 113
           EA +LF+KM + +  +WN +++ Y  +G + EA+K+F++ P +N  +W+++I GY   GL
Sbjct: 12  EARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGL 71

Query: 114 DIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDL----NAF 169
             EA  LFW+M      P +  +   + L    GL++ G        +  FD+    +  
Sbjct: 72  IEEAELLFWRM------PERNVVSWTVML---GGLIEDGRVDEA---RQLFDMMPVKDVV 119

Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG-------------YSQNGYG 216
             T ++D       + EA  +F   P  +N VAWT+MI+G             Y + G+ 
Sbjct: 120 ASTNMIDGLCSEGRLIEAREIFDEMPQ-RNVVAWTSMISGEKDDGTWSTMIKIYERKGFE 178

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
            +A+  F  M+ EGV  +  +  S+L+ C ++++ D G QVH  ++ S F+ ++YV S L
Sbjct: 179 LEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVL 238

Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
           I MY KCGDL +A+R+ +     + V WNS+I G+A+ GF ++AL +F  M +  I  D+
Sbjct: 239 ITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDE 298

Query: 337 FTYPSVLNCFASNIDLNNAKSV-HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVF 394
            T+  VL+  +    +     +  S+  K   +        ++D+  + G L+ A  ++ 
Sbjct: 299 ITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIE 358

Query: 395 NLMQDKDVISWTSLITGCAYHGSY---EEALKYFSDMRISGICPDHVVVSSILSACAELT 451
           N+  + D I W +L+  C  H +    E A K    +  +   P ++++S++ S+ +   
Sbjct: 359 NMPVEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGP-YILLSNLYSSQSRWK 417

Query: 452 -VLEFGQQVHAVFL-KSGGCSSLSVDNSL 478
            V+E  + + A  L KS GCS + VD  +
Sbjct: 418 DVVELRKTMRAKNLRKSPGCSWIEVDKKV 446



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 146/275 (53%), Gaps = 18/275 (6%)

Query: 50  GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYG-- 107
           G +DEA QLF+ M  +D      MI    + GRL EA+++F+E P +N   W+S+I G  
Sbjct: 101 GRVDEARQLFDMMPVKDVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEK 160

Query: 108 -----------YSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
                      Y   G ++EA  LF  MQ EG RPS  ++ +VL +C     L  G Q H
Sbjct: 161 DDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVH 220

Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
              +++ FD++ +V + L+ MY KC  +  A+ +F  F   K+ V W ++I GY+Q+G+G
Sbjct: 221 SQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRF-SSKDIVMWNSIIAGYAQHGFG 279

Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ--S 274
            KA+E F DM    +  ++ TF  +L+AC+       G ++    + S ++ +   +  +
Sbjct: 280 EKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFES-MKSKYQVDPKTEHYA 338

Query: 275 ALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
            ++D+  + G L+ A  L+E   ++ + + W +++
Sbjct: 339 CMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALL 373



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 80/186 (43%), Gaps = 38/186 (20%)

Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
           +A ++FD M   + I+W  L+ G  QNG   EA + +D+M  R    + +++  ++    
Sbjct: 12  EARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPER----NVVSWTAMIRGYV 67

Query: 550 HAGLAENARWYFESMD------------------------KVYGIKPGPDHYAC--MIDL 583
             GL E A   F  M                         +++ + P  D  A   MID 
Sbjct: 68  QEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVASTNMIDG 127

Query: 584 LGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGD----LELGERAANNLFELEPMN 639
           L   G+LIEA+ + D+M  + +   W +++S  +  G     +++ ER     FELE + 
Sbjct: 128 LCSEGRLIEAREIFDEM-PQRNVVAWTSMISGEKDDGTWSTMIKIYERKG---FELEALA 183

Query: 640 AMPYVQ 645
               +Q
Sbjct: 184 LFSLMQ 189


>gi|48475086|gb|AAT44155.1| hypothetical protein, contains pentrtricopeptide (PPR) repeat
           [Oryza sativa Japonica Group]
 gi|125568883|gb|EAZ10398.1| hypothetical protein OsJ_00231 [Oryza sativa Japonica Group]
          Length = 836

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 252/787 (32%), Positives = 394/787 (50%), Gaps = 77/787 (9%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETP---FKNFFTWSSLIYGYSNYGLDIEAFELF 121
           RD      ++   A  GR     +L +E      K+   W+  +   +      EA  +F
Sbjct: 85  RDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVF 144

Query: 122 WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
            +MQ  G     YT   VL  C   G L+ G   H YA+K   D +  V   L  MYA+ 
Sbjct: 145 REMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDAHPLVPGFLAGMYAEN 204

Query: 182 KCIFEAEYLFKMFPDGK----------------------------------NHVAWTTMI 207
             +  A  +      G                                   N   W T++
Sbjct: 205 ADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVL 264

Query: 208 TGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFE 267
           +G S++G   +A+     M  +G+  +  T  S+L + A       G ++H   L +  E
Sbjct: 265 SGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLE 324

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM 327
            +VY  +AL+DMYAKCG LD A+++L+  E  N  +WNS++ G+A  G    AL L + M
Sbjct: 325 PDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELM 384

Query: 328 HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL 387
               +  D  T+                                   N LI  Y+  G  
Sbjct: 385 KKNRLDPDITTW-----------------------------------NGLITGYSMNGQS 409

Query: 388 DCAFMVFNLMQ----DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSI 443
             A ++   ++      +V+SWTSLI+G  ++G YE++  +  +M+  G+ P  V +S +
Sbjct: 410 SQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVL 469

Query: 444 LSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDV 503
           L ACA L + + G+++H   L+      + V  +L+ +Y+K G +  A  +F+S+  +++
Sbjct: 470 LRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQKNL 529

Query: 504 ITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFES 563
           +   A++ G A +G+G+EA++ +  M   G KPD ITF  LL AC   GL      YF+S
Sbjct: 530 VLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDS 589

Query: 564 MDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
           M+  YG+KP  ++YACM+DLL R G L EA   +++   +P A+ W ALL+ C +HG+L 
Sbjct: 590 METKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCSIHGNLA 649

Query: 624 LGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETN 683
           L E AA NLF LEP N+  Y+ + N+Y     +++A  ++  MK+RG+   PG SW++  
Sbjct: 650 LAEVAARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARGVDSRPGWSWIQIE 709

Query: 684 SQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSE 743
             +H+F  + + HP   +IY ++  ++  IK+AGYVPD +   +NV+EE KE  L  H+E
Sbjct: 710 QGIHVFEVDGKPHPETAEIYEELIRLVFQIKKAGYVPDTSCIAYNVQEEEKEKLLLGHTE 769

Query: 744 KLAVAFGLL-TLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGN 802
           KLA+ +GL+ +    AP+R+ KN R+C DCH   K+IS++  R IILRD+ RFHHF  G 
Sbjct: 770 KLAITYGLIRSDASRAPVRVMKNTRMCNDCHEVAKHISSLCDRQIILRDAVRFHHFVDGK 829

Query: 803 CSCGDYW 809
           CSC DYW
Sbjct: 830 CSCNDYW 836



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 123/505 (24%), Positives = 216/505 (42%), Gaps = 72/505 (14%)

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKC-KCIFEAEYLFKMFPDG-KNHVAWTTMITGYS 211
           Q H  A++T    +  V   LVD+ A+  +    A  L +   DG K+ V W   +   +
Sbjct: 73  QLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVAMLA 132

Query: 212 QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVY 271
           +     +AI  FR+M+  GV ++ +T   +L AC    A   G  VH   L    +A+  
Sbjct: 133 EAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDAHPL 192

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM---- 327
           V   L  MYA+  D+ +A R+L+     + V WN+++   AR G   +AL L  +M    
Sbjct: 193 VPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSG 252

Query: 328 -----------------HARD--------------IKIDDFTYPSVLNCFASNIDLNNAK 356
                            H RD              ++ D  T  S+L   A+   L +  
Sbjct: 253 PEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGM 312

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H   ++   E   +   AL+DMYAK G LDCA  V + ++ +++ +W SL+ G A  G
Sbjct: 313 EIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAG 372

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
            ++ AL+    M+ + + PD    + +++  +       GQ   AV L            
Sbjct: 373 RFDIALELVELMKKNRLDPDITTWNGLITGYS-----MNGQSSQAVLL------------ 415

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
                           ++  +  T +V++WT+LI G   NG+ +++  F  +M   G +P
Sbjct: 416 --------------LRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQP 461

Query: 537 DYITFVGLLFACSHAGLAENAR-WYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
             +T   LL AC+   L +  +  +  ++ + Y           +ID+  + G L+ AK 
Sbjct: 462 SLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVS--TALIDMYSKGGSLVSAKV 519

Query: 596 LLDQMVGEPDATVWKALLSACRVHG 620
           + +  + + +  +  A+L+   VHG
Sbjct: 520 IFES-IQQKNLVLCNAMLTGLAVHG 543



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 177/408 (43%), Gaps = 42/408 (10%)

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID---NEVSWNS 306
           AR    Q+H   + +G   +  V  AL+D+ A+ G   S  RLL  +  D   + V WN 
Sbjct: 67  ARRLAPQLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNK 126

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
            +   A      EA+++F++M AR +  D +T   VL+       L   ++VH+  +K  
Sbjct: 127 HVAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLA 186

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLM----------------------------- 397
            + +  V   L  MYA+  ++  A  V + M                             
Sbjct: 187 LDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAA 246

Query: 398 ------QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELT 451
                  + +V +W ++++GC+ HG   EAL   + M   G+ PD   VSS+L + A   
Sbjct: 247 RMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTG 306

Query: 452 VLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIM 511
           +L  G ++H  FL++     +    +LV +YAKCG ++ A +V D++  R++ TW +L+ 
Sbjct: 307 LLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVA 366

Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIK 571
           G A  G+   AL+  + M      PD  T+ GL+   S  G +  A      + K  G+ 
Sbjct: 367 GYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQI-KAAGVT 425

Query: 572 PGPDHYACMIDLLGRSGKLIEAKALLDQMVG---EPDATVWKALLSAC 616
           P    +  +I     +G+  ++     +M     +P       LL AC
Sbjct: 426 PNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRAC 473



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/447 (24%), Positives = 190/447 (42%), Gaps = 75/447 (16%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSG----RLREAKKLFNETPFKNFFTW 101
           ++ + ++  A ++ + M       WN ++A  A  G     L  A ++    P  N  TW
Sbjct: 201 YAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATW 260

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIK 161
           ++++ G S +G D EA  +   M  +G RP   T+ ++L+  +  GLL+ G + H + ++
Sbjct: 261 NTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLR 320

Query: 162 TCFDLNAFVVTGLVDMYAKCKCI----------------------------------FEA 187
              + + +  T LVDMYAKC  +                                   E 
Sbjct: 321 NQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALEL 380

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTF--------- 238
             L K      +   W  +ITGYS NG   +A+   R ++  GV  N  ++         
Sbjct: 381 VELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCH 440

Query: 239 --------------------PSILT------ACAAVSARDFGAQVHGCILSSGFEANVYV 272
                               PS++T      ACA ++ +  G ++H   L   ++ ++ V
Sbjct: 441 NGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVV 500

Query: 273 QSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI 332
            +ALIDMY+K G L SA+ + E  +  N V  N+M+ G A  G  +EA+ LF  M    +
Sbjct: 501 STALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGL 560

Query: 333 KIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
           K D  T+ ++L  C +  +     +   S+  K G +        ++D+ A+ G LD A 
Sbjct: 561 KPDSITFTALLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAM 620

Query: 392 -MVFNLMQDKDVISWTSLITGCAYHGS 417
             +     D     W +L+TGC+ HG+
Sbjct: 621 DFIERSPIDPGASHWGALLTGCSIHGN 647



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 151/288 (52%), Gaps = 15/288 (5%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMS----DRDGFTWNTMIAAYANSGRLREAKKLFNE--- 92
           N  +  ++N+G  D A +L E M     D D  TWN +I  Y+ +G+  +A  L  +   
Sbjct: 362 NSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKA 421

Query: 93  ---TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLL 149
              TP  N  +W+SLI G  + G   ++F    +MQ +G +PS  T+  +LR C+   L 
Sbjct: 422 AGVTP--NVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQ 479

Query: 150 QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
           ++G++ H +A++  +D +  V T L+DMY+K   +  A+ +F+     KN V    M+TG
Sbjct: 480 KKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQ-KNLVLCNAMLTG 538

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEA 268
            + +G G +AIE F DM   G++ +  TF ++LTAC ++     G +    + +  G + 
Sbjct: 539 LAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDSMETKYGVKP 598

Query: 269 NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIVGFARQG 315
                + ++D+ A+CG LD A   +E S ID   S W +++ G +  G
Sbjct: 599 TTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCSIHG 646



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 186/436 (42%), Gaps = 28/436 (6%)

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN-LDCAFMVFNLMQD--KDVISWTSLITG 411
           A  +HSL V+TG      V  AL+D+ A+ G    CA ++    +D  KD + W   +  
Sbjct: 71  APQLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVAM 130

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
            A    ++EA+  F +M+  G+  D    + +L AC     L  G+ VHA  LK    + 
Sbjct: 131 LAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDAH 190

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
             V   L  +YA+   +  A RV D+M    V+ W A++  CA+ G   +AL+   +M  
Sbjct: 191 PLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSR 250

Query: 532 RGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKL- 590
            G +P+  T+  +L  CS  G    A     SM K  G++P     + ++  +  +G L 
Sbjct: 251 SGPEPNVATWNTVLSGCSRHGRDREALGVVASMLK-QGLRPDATTVSSLLKSVANTGLLR 309

Query: 591 ----IEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQL 646
               I    L +Q+  EPD     AL+      G L+  ++    L  LE  N   +  L
Sbjct: 310 HGMEIHCFFLRNQL--EPDVYTGTALVDMYAKCGRLDCAQKV---LDALEHRNLTTWNSL 364

Query: 647 SNMYSTAGKWEDAARVRKLMKSRGIRKEP----------GCSWVETNSQVHIFISEDRGH 696
              Y+ AG+++ A  + +LMK    R +P          G S    +SQ  + + + +  
Sbjct: 365 VAGYANAGRFDIALELVELMKKN--RLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAA 422

Query: 697 PLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQ 756
            +  ++ S    I        Y  D  +  H ++++G +  L   S  L    GL    +
Sbjct: 423 GVTPNVVSWTSLISGSCHNGEY-EDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKK 481

Query: 757 GAPIRIFKNLRVCGDC 772
           G  +  F  LR   DC
Sbjct: 482 GKELHCFA-LRRAYDC 496


>gi|215768832|dbj|BAH01061.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 842

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 252/787 (32%), Positives = 394/787 (50%), Gaps = 77/787 (9%)

Query: 65  RDGFTWNTMIAAYANSGRLREAKKLFNETP---FKNFFTWSSLIYGYSNYGLDIEAFELF 121
           RD      ++   A  GR     +L +E      K+   W+  +   +      EA  +F
Sbjct: 85  RDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVF 144

Query: 122 WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
            +MQ  G     YT   VL  C   G L+ G   H YA+K   D +  V   L  MYA+ 
Sbjct: 145 REMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDAHPLVPGFLAGMYAEN 204

Query: 182 KCIFEAEYLFKMFPDGK----------------------------------NHVAWTTMI 207
             +  A  +      G                                   N   W T++
Sbjct: 205 ADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVL 264

Query: 208 TGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFE 267
           +G S++G   +A+     M  +G+  +  T  S+L + A       G ++H   L +  E
Sbjct: 265 SGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLE 324

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM 327
            +VY  +AL+DMYAKCG LD A+++L+  E  N  +WNS++ G+A  G    AL L + M
Sbjct: 325 PDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELM 384

Query: 328 HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL 387
               +  D  T+                                   N LI  Y+  G  
Sbjct: 385 KKNRLDPDITTW-----------------------------------NGLITGYSMNGQS 409

Query: 388 DCAFMVFNLMQ----DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSI 443
             A ++   ++      +V+SWTSLI+G  ++G YE++  +  +M+  G+ P  V +S +
Sbjct: 410 SQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVL 469

Query: 444 LSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDV 503
           L ACA L + + G+++H   L+      + V  +L+ +Y+K G +  A  +F+S+  +++
Sbjct: 470 LRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQKNL 529

Query: 504 ITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFES 563
           +   A++ G A +G+G+EA++ +  M   G KPD ITF  LL AC   GL      YF+S
Sbjct: 530 VLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDS 589

Query: 564 MDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
           M+  YG+KP  ++YACM+DLL R G L EA   +++   +P A+ W ALL+ C +HG+L 
Sbjct: 590 METKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCSIHGNLA 649

Query: 624 LGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETN 683
           L E AA NLF LEP N+  Y+ + N+Y     +++A  ++  MK+RG+   PG SW++  
Sbjct: 650 LAEVAARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYAMKARGVDSRPGWSWIQIE 709

Query: 684 SQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSE 743
             +H+F  + + HP   +IY ++  ++  IK+AGYVPD +   +NV+EE KE  L  H+E
Sbjct: 710 QGIHVFEVDGKPHPETAEIYEELIRLVFQIKKAGYVPDTSCIAYNVQEEEKEKLLLGHTE 769

Query: 744 KLAVAFGLL-TLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGN 802
           KLA+ +GL+ +    AP+R+ KN R+C DCH   K+IS++  R IILRD+ RFHHF  G 
Sbjct: 770 KLAITYGLIRSDASRAPVRVMKNTRMCNDCHEVAKHISSLCDRQIILRDAVRFHHFVDGK 829

Query: 803 CSCGDYW 809
           CSC DYW
Sbjct: 830 CSCNDYW 836



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 123/505 (24%), Positives = 216/505 (42%), Gaps = 72/505 (14%)

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKC-KCIFEAEYLFKMFPDG-KNHVAWTTMITGYS 211
           Q H  A++T    +  V   LVD+ A+  +    A  L +   DG K+ V W   +   +
Sbjct: 73  QLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVAMLA 132

Query: 212 QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVY 271
           +     +AI  FR+M+  GV ++ +T   +L AC    A   G  VH   L    +A+  
Sbjct: 133 EAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDAHPL 192

Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM---- 327
           V   L  MYA+  D+ +A R+L+     + V WN+++   AR G   +AL L  +M    
Sbjct: 193 VPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSG 252

Query: 328 -----------------HARD--------------IKIDDFTYPSVLNCFASNIDLNNAK 356
                            H RD              ++ D  T  S+L   A+   L +  
Sbjct: 253 PEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGM 312

Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
            +H   ++   E   +   AL+DMYAK G LDCA  V + ++ +++ +W SL+ G A  G
Sbjct: 313 EIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAG 372

Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
            ++ AL+    M+ + + PD    + +++  +       GQ   AV L            
Sbjct: 373 RFDIALELVELMKKNRLDPDITTWNGLITGYS-----MNGQSSQAVLL------------ 415

Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
                           ++  +  T +V++WT+LI G   NG+ +++  F  +M   G +P
Sbjct: 416 --------------LRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQP 461

Query: 537 DYITFVGLLFACSHAGLAENAR-WYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKA 595
             +T   LL AC+   L +  +  +  ++ + Y           +ID+  + G L+ AK 
Sbjct: 462 SLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVS--TALIDMYSKGGSLVSAKV 519

Query: 596 LLDQMVGEPDATVWKALLSACRVHG 620
           + +  + + +  +  A+L+   VHG
Sbjct: 520 IFES-IQQKNLVLCNAMLTGLAVHG 543



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 177/408 (43%), Gaps = 42/408 (10%)

Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID---NEVSWNS 306
           AR    Q+H   + +G   +  V  AL+D+ A+ G   S  RLL  +  D   + V WN 
Sbjct: 67  ARRLAPQLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNK 126

Query: 307 MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG 366
            +   A      EA+++F++M AR +  D +T   VL+       L   ++VH+  +K  
Sbjct: 127 HVAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLA 186

Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLM----------------------------- 397
            + +  V   L  MYA+  ++  A  V + M                             
Sbjct: 187 LDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAA 246

Query: 398 ------QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELT 451
                  + +V +W ++++GC+ HG   EAL   + M   G+ PD   VSS+L + A   
Sbjct: 247 RMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTG 306

Query: 452 VLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIM 511
           +L  G ++H  FL++     +    +LV +YAKCG ++ A +V D++  R++ TW +L+ 
Sbjct: 307 LLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVA 366

Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIK 571
           G A  G+   AL+  + M      PD  T+ GL+   S  G +  A      + K  G+ 
Sbjct: 367 GYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQI-KAAGVT 425

Query: 572 PGPDHYACMIDLLGRSGKLIEAKALLDQMVG---EPDATVWKALLSAC 616
           P    +  +I     +G+  ++     +M     +P       LL AC
Sbjct: 426 PNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRAC 473



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/447 (24%), Positives = 190/447 (42%), Gaps = 75/447 (16%)

Query: 46  FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSG----RLREAKKLFNETPFKNFFTW 101
           ++ + ++  A ++ + M       WN ++A  A  G     L  A ++    P  N  TW
Sbjct: 201 YAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATW 260

Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIK 161
           ++++ G S +G D EA  +   M  +G RP   T+ ++L+  +  GLL+ G + H + ++
Sbjct: 261 NTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLR 320

Query: 162 TCFDLNAFVVTGLVDMYAKCKCI----------------------------------FEA 187
              + + +  T LVDMYAKC  +                                   E 
Sbjct: 321 NQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALEL 380

Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTF--------- 238
             L K      +   W  +ITGYS NG   +A+   R ++  GV  N  ++         
Sbjct: 381 VELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCH 440

Query: 239 --------------------PSILT------ACAAVSARDFGAQVHGCILSSGFEANVYV 272
                               PS++T      ACA ++ +  G ++H   L   ++ ++ V
Sbjct: 441 NGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVV 500

Query: 273 QSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI 332
            +ALIDMY+K G L SA+ + E  +  N V  N+M+ G A  G  +EA+ LF  M    +
Sbjct: 501 STALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGL 560

Query: 333 KIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
           K D  T+ ++L  C +  +     +   S+  K G +        ++D+ A+ G LD A 
Sbjct: 561 KPDSITFTALLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAM 620

Query: 392 -MVFNLMQDKDVISWTSLITGCAYHGS 417
             +     D     W +L+TGC+ HG+
Sbjct: 621 DFIERSPIDPGASHWGALLTGCSIHGN 647



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 151/288 (52%), Gaps = 15/288 (5%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMS----DRDGFTWNTMIAAYANSGRLREAKKLFNE--- 92
           N  +  ++N+G  D A +L E M     D D  TWN +I  Y+ +G+  +A  L  +   
Sbjct: 362 NSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKA 421

Query: 93  ---TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLL 149
              TP  N  +W+SLI G  + G   ++F    +MQ +G +PS  T+  +LR C+   L 
Sbjct: 422 AGVTP--NVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQ 479

Query: 150 QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
           ++G++ H +A++  +D +  V T L+DMY+K   +  A+ +F+     KN V    M+TG
Sbjct: 480 KKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQ-KNLVLCNAMLTG 538

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEA 268
            + +G G +AIE F DM   G++ +  TF ++LTAC ++     G +    + +  G + 
Sbjct: 539 LAVHGQGREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDSMETKYGVKP 598

Query: 269 NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIVGFARQG 315
                + ++D+ A+CG LD A   +E S ID   S W +++ G +  G
Sbjct: 599 TTENYACMVDLLARCGYLDEAMDFIERSPIDPGASHWGALLTGCSIHG 646



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 186/436 (42%), Gaps = 28/436 (6%)

Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN-LDCAFMVFNLMQD--KDVISWTSLITG 411
           A  +HSL V+TG      V  AL+D+ A+ G    CA ++    +D  KD + W   +  
Sbjct: 71  APQLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVAM 130

Query: 412 CAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS 471
            A    ++EA+  F +M+  G+  D    + +L AC     L  G+ VHA  LK    + 
Sbjct: 131 LAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALKLALDAH 190

Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
             V   L  +YA+   +  A RV D+M    V+ W A++  CA+ G   +AL+   +M  
Sbjct: 191 PLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSR 250

Query: 532 RGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKL- 590
            G +P+  T+  +L  CS  G    A     SM K  G++P     + ++  +  +G L 
Sbjct: 251 SGPEPNVATWNTVLSGCSRHGRDREALGVVASMLK-QGLRPDATTVSSLLKSVANTGLLR 309

Query: 591 ----IEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQL 646
               I    L +Q+  EPD     AL+      G L+  ++    L  LE  N   +  L
Sbjct: 310 HGMEIHCFFLRNQL--EPDVYTGTALVDMYAKCGRLDCAQKV---LDALEHRNLTTWNSL 364

Query: 647 SNMYSTAGKWEDAARVRKLMKSRGIRKEP----------GCSWVETNSQVHIFISEDRGH 696
              Y+ AG+++ A  + +LMK    R +P          G S    +SQ  + + + +  
Sbjct: 365 VAGYANAGRFDIALELVELMKKN--RLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAA 422

Query: 697 PLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQ 756
            +  ++ S    I        Y  D  +  H ++++G +  L   S  L    GL    +
Sbjct: 423 GVTPNVVSWTSLISGSCHNGEY-EDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKK 481

Query: 757 GAPIRIFKNLRVCGDC 772
           G  +  F  LR   DC
Sbjct: 482 GKELHCFA-LRRAYDC 496


>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
 gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 223/571 (39%), Positives = 344/571 (60%), Gaps = 1/571 (0%)

Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
           +++TA +  S+  +   +H  ++ S    + ++   L+  Y + G    A  L +     
Sbjct: 43  ALITAISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELPDK 102

Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMH-ARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
           + VSWNS+I GF+R+      L L  +M     +K ++ T   V++  A   +L+  K +
Sbjct: 103 DLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGKCI 162

Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
           H + VK+G      V N+LI++Y K G L+ A  +F  M  + ++SW S++    + G  
Sbjct: 163 HGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHMGLA 222

Query: 419 EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSL 478
           E+ + YF  MR +GI  D   V S+L AC  L V +  + VH   L  G   +L++  +L
Sbjct: 223 EKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATAL 282

Query: 479 VLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDY 538
           + +YAK G ++D+ +VF  M   D + WTA++   A +G+G+EA++ ++ M+  G  PD+
Sbjct: 283 LDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREGVVPDH 342

Query: 539 ITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLD 598
           +TF  LL ACSH+GL E  + YF+ M + YG++   +HY+CM+DLLGRSG L +A  L+ 
Sbjct: 343 VTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAYKLIK 402

Query: 599 QMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWED 658
            M  EP++ VW AL+ ACRV G++ELG+  A  LF L+P ++  Y+ LSNMYS AG+W D
Sbjct: 403 SMPMEPNSGVWGALIGACRVRGNIELGKEVAERLFSLDPSDSRNYITLSNMYSAAGQWRD 462

Query: 659 AARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGY 718
           A++VR LMK R + + PGCS++E  +++H F+  D+ HP    IY+K++E++   +E G+
Sbjct: 463 ASKVRALMKERVLIRNPGCSYIEHGNKIHCFVMGDQSHPDTEQIYNKLEELVRKNREVGF 522

Query: 719 VPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKY 778
                + LH+V+EE KE  +  HSEKLA+AFGLL    G P+ I KN+R+CGDCH   K 
Sbjct: 523 ASKTEYVLHDVDEEVKEDLINKHSEKLAIAFGLLVTNAGMPLIITKNIRICGDCHGFAKL 582

Query: 779 ISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           IS +  R II+RD+ RFHHF  G CSCGDYW
Sbjct: 583 ISLIEKRTIIIRDTKRFHHFTNGLCSCGDYW 613



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 184/360 (51%), Gaps = 12/360 (3%)

Query: 67  GFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL 126
           GF  + ++++Y   G  ++A +LF+E P K+  +W+SLI G+S          L ++M+ 
Sbjct: 73  GFIGDQLVSSYVELGCTKDALELFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRF 132

Query: 127 E-GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
           E G +P++ T+  V+  C+  G L  G+  HG A+K+   L   VV  L+++Y KC C+ 
Sbjct: 133 EMGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLE 192

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A  LF+     ++ V+W +M+  +   G   K I  F  MR  G+ S+Q T  S+L AC
Sbjct: 193 AACCLFEGMSV-QSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLAC 251

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
             +  R     VHG IL+ G + N+ + +AL+D+YAK G L  + ++       + V+W 
Sbjct: 252 ENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWT 311

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLI--- 362
           +M+  +A  G  +EA+  F+ M    +  D  T+  +L+  + +  +   K+   ++   
Sbjct: 312 AMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEF 371

Query: 363 --VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM-QDKDVISWTSLITGCAYHGSYE 419
             V+   E Y    + ++D+  + G+L+ A+ +   M  + +   W +LI  C   G+ E
Sbjct: 372 YGVELRVEHY----SCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALIGACRVRGNIE 427



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/191 (22%), Positives = 91/191 (47%), Gaps = 6/191 (3%)

Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSM 498
           +VS++++A +  + + + + +H   +KS   +   + + LV  Y + GC  DA  +FD +
Sbjct: 40  LVSALITAISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDEL 99

Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQM-LARGTKPDYITFVGLLFACSHAGLAENA 557
             +D+++W +LI G ++       L    +M    G KP+ +T + ++ AC+  G  +  
Sbjct: 100 PDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVG 159

Query: 558 RWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACR 617
           +     +    G+         +I+L G+ G L  A  L + M  +   + W ++++   
Sbjct: 160 KC-IHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVS-WNSMVA--- 214

Query: 618 VHGDLELGERA 628
           VH  + L E+ 
Sbjct: 215 VHVHMGLAEKG 225


>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
          Length = 610

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 217/537 (40%), Positives = 325/537 (60%), Gaps = 8/537 (1%)

Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
           + L+  +  CGD+D ARR+     + +  SWN+M+ G ++ G  +EA ++F+ M  R+  
Sbjct: 81  NTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSKNGASEEAAAMFRIMPVRNA- 139

Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
               ++ +++   A + D+  A+    L      +    +  A++  Y   GN+  A   
Sbjct: 140 ---VSWNAMVAALACSGDMGAAED---LFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEF 193

Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC-PDHVVVSSILSACAELTV 452
           F  M  ++++SW +++ G   +   ++AL+ F  M    I  P+   +SS+L  C+ L+ 
Sbjct: 194 FGAMPVRNLVSWNAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSA 253

Query: 453 LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMG 512
           L FG+QVH   +K     +++V  SL+ +Y KCG +NDA +VFD M T+D++ W A+I G
Sbjct: 254 LGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMISG 313

Query: 513 CAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKP 572
            AQ+G G +A++ +++M   G  PD+IT + +L AC H GL +     FE+M + Y I+P
Sbjct: 314 YAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYKIEP 373

Query: 573 GPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNL 632
             DHY+CM+DLL R+G L  A  ++  M  EP  + +  LL+ACRV+ +LE  E AA  L
Sbjct: 374 QIDHYSCMVDLLCRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKL 433

Query: 633 FELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISE 692
            E +P NA  YVQL+N+Y+ A KW D +RVR+ MK   + K PG SW+E     H F S 
Sbjct: 434 IEQDPQNAGAYVQLANIYAVANKWADVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSN 493

Query: 693 DRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLL 752
           DR HP    I+ K+D + +L+K  GYVPD++FALH+VE+  K   L  HSEKLA+AFGL+
Sbjct: 494 DRLHPQLGLIHDKLDRLQMLMKAMGYVPDLDFALHDVEDSLKSQMLMRHSEKLAIAFGLI 553

Query: 753 TLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           +   G  +RIFKNLR+CGDCH A K IS +  R IILRD+ RFHHF+ G+CSCGDYW
Sbjct: 554 STSPGMTLRIFKNLRICGDCHNAAKLISKIEDREIILRDTTRFHHFRGGHCSCGDYW 610



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/386 (24%), Positives = 183/386 (47%), Gaps = 35/386 (9%)

Query: 51  EIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSN 110
            + +A +LF+ +   D  ++NT+++ +   G +  A+++F+  P K+  +W++++ G S 
Sbjct: 61  RLADARRLFDSIPHPDTVSYNTLLSCHFACGDIDGARRVFSTMPVKDVTSWNTMVSGLSK 120

Query: 111 YGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ-FHGYAIKTCFDLNAF 169
            G   EA  +F  M +     +  + + ++   +  G +   E  F     KT    +A 
Sbjct: 121 NGASEEAAAMFRIMPVR----NAVSWNAMVAALACSGDMGAAEDLFRNAPEKT----DAI 172

Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
           + T +V  Y     + +A   F   P  +N V+W  ++ GY +N     A+  F+ M  +
Sbjct: 173 LWTAMVSGYMDTGNVQKAMEFFGAMP-VRNLVSWNAVVAGYVKNSRADDALRVFKTMVED 231

Query: 230 G-VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
             V+ N  T  S+L  C+ +SA  FG QVH   +      NV V ++L+ MY KCGDL+ 
Sbjct: 232 SIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCKCGDLND 291

Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
           A ++ +     + V+WN+MI G+A+ G   +A+ LF+KM    +  D  T  +VL     
Sbjct: 292 ACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAVLT---- 347

Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNA------------LIDMYAKQGNLDCAF-MVFN 395
                    +H+ +   G + ++ +  A            ++D+  + G L+ A  M+ +
Sbjct: 348 -------ACIHTGLCDFGIQCFETMQEAYKIEPQIDHYSCMVDLLCRAGLLERAVNMIHS 400

Query: 396 LMQDKDVISWTSLITGCAYHGSYEEA 421
           +  +    ++ +L+T C  + + E A
Sbjct: 401 MPFEPHPSAYGTLLTACRVYKNLEFA 426



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 135/295 (45%), Gaps = 35/295 (11%)

Query: 33  VKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE 92
           VK  +  N  +   S +G  +EA  +F  M  R+  +WN M+AA A SG +  A+ LF  
Sbjct: 105 VKDVTSWNTMVSGLSKNGASEEAAAMFRIMPVRNAVSWNAMVAALACSGDMGAAEDLFRN 164

Query: 93  TPFK-NFFTWSSLIYGYSNYGLDIEAFELF----------WQMQLEGY------------ 129
            P K +   W++++ GY + G   +A E F          W   + GY            
Sbjct: 165 APEKTDAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRV 224

Query: 130 ----------RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYA 179
                     +P+  TL +VL  CS    L  G Q H + +K     N  V T L+ MY 
Sbjct: 225 FKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYC 284

Query: 180 KCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFP 239
           KC  + +A  +F      K+ VAW  MI+GY+Q+G G +AI+ F  M+ EGV  +  T  
Sbjct: 285 KCGDLNDACKVFDEM-STKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLL 343

Query: 240 SILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLL 293
           ++LTAC      DFG Q    +  +   E  +   S ++D+  + G L+ A  ++
Sbjct: 344 AVLTACIHTGLCDFGIQCFETMQEAYKIEPQIDHYSCMVDLLCRAGLLERAVNMI 398


>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 240/666 (36%), Positives = 353/666 (53%), Gaps = 91/666 (13%)

Query: 120 LFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYA 179
           L   + L    P    LD+ LR  S +G        H   + T F +  F+   L+D+Y 
Sbjct: 6   LVRDLYLPNSSPFAKLLDSCLRSRSARGT----RLVHARILMTQFSMEIFIQNRLIDVYG 61

Query: 180 KCKCIFEAEYLFKMFPDGK------------------------------NHVAWTTMITG 209
           KC C+ +A  LF   P                                 +  +W +M++G
Sbjct: 62  KCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSG 121

Query: 210 YSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEAN 269
           ++Q+    +++E F  M  E    N+++F S L+ACA +   + G QVH  +  S +  +
Sbjct: 122 FAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTD 181

Query: 270 VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHA 329
           VY+ SALIDMY+KCG +  A  +       N V+WNS+I  + + G   EAL +F +M  
Sbjct: 182 VYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMD 241

Query: 330 RDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG-FEGYKFVNNALIDMYAK----- 383
             ++ D+ T  SV++  AS   L     +H+ +VKT  F     + NAL+DMYAK     
Sbjct: 242 SGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVN 301

Query: 384 --------------------------QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
                                       ++  A  +F+ M  ++V+SW +LI G   +G 
Sbjct: 302 EARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGE 361

Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
            EEAL+ F  ++   I P H    ++L                         S + V NS
Sbjct: 362 NEEALRLFRLLKRESIWPTHYTFGNLLK------------------------SDIFVGNS 397

Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
           L+ +Y KCG I D +RVF+ M  RD ++W A+I+G AQNG G EALQ + +ML  G KPD
Sbjct: 398 LIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPD 457

Query: 538 YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALL 597
           ++T +G+L ACSHAGL E  R YF SM++ +G+ P  DHY CM+DLLGR+G L EAK L+
Sbjct: 458 HVTMIGVLCACSHAGLVEEGRHYFFSMEE-HGLIPLKDHYTCMVDLLGRAGCLNEAKNLI 516

Query: 598 DQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWE 657
           + M   PDA VW +LL+AC+VHG++E+G+ AA  L E++P N+ PYV LSNMY+  G+W 
Sbjct: 517 EAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWG 576

Query: 658 DAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAG 717
           D  RVRKLM+ +G+ K+PGCSW+E  S+VH+F+ +D+ HP R  IYS +  +   +K  G
Sbjct: 577 DVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVG 636

Query: 718 YVPDMN 723
           Y+PD N
Sbjct: 637 YIPDAN 642



 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 150/501 (29%), Positives = 264/501 (52%), Gaps = 21/501 (4%)

Query: 40  NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
           NR +  +     +D+A +LF++M  R+ FTWN++I+    SG L EA +LF   P  +  
Sbjct: 54  NRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQC 113

Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
           +W+S++ G++ +    E+ E F +M  E +  ++Y+  + L  C+    L  G Q H   
Sbjct: 114 SWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALV 173

Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
            K+ +  + ++ + L+DMY+KC  +  AE +F    + +N V W ++IT Y QNG   +A
Sbjct: 174 SKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIE-RNLVTWNSLITCYEQNGPASEA 232

Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSG-FEANVYVQSALID 278
           +E F  M   G+E ++ T  S+++ACA++ A   G Q+H  ++ +  F  ++ + +AL+D
Sbjct: 233 LEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVD 292

Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
           MYAKC  ++ ARR+ +   I N VS  SM+ G+AR    K A  +F KM  R++     +
Sbjct: 293 MYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNV----VS 348

Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTG-----------FEGYKFVNNALIDMYAKQGNL 387
           + +++  +  N +   A  +  L+ +              +   FV N+LIDMY K G++
Sbjct: 349 WNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSI 408

Query: 388 DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSAC 447
           +    VF  M+++D +SW ++I G A +G   EAL+ F  M + G  PDHV +  +L AC
Sbjct: 409 EDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCAC 468

Query: 448 AELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITW 506
           +   ++E G+       + G          +V +  + GC+N+A  + ++M    D + W
Sbjct: 469 SHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVW 528

Query: 507 TALIMGCAQNGK---GKEALQ 524
            +L+  C  +G    GK A +
Sbjct: 529 GSLLAACKVHGNIEMGKHAAE 549


>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
          Length = 370

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 201/370 (54%), Positives = 262/370 (70%)

Query: 440 VSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH 499
           ++ IL ACA +  LE G+QVHA  +K G    +SV N LV +Y KCG I DA  VF  + 
Sbjct: 1   MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLL 60

Query: 500 TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARW 559
             DV +W A+I G AQ+G GKEA+  ++QML  G KP+ ITFV +L  CSHAGL +  R 
Sbjct: 61  EPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRN 120

Query: 560 YFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVH 619
           YF+SM + +GI P  +HY+CM+DL GR+G L EA   ++QM  EP+A+VW +LL ACRVH
Sbjct: 121 YFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVH 180

Query: 620 GDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSW 679
           G++EL ERA   L EL P N   YV LSN+Y+ AG+W+DA +VRK+MK R ++KEPGCSW
Sbjct: 181 GNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSW 240

Query: 680 VETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLA 739
           +E  ++VH FI  D  HP   +IY  ++ + L +K AGY+P+ NF LH+VEEE KE  L 
Sbjct: 241 IEVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWILG 300

Query: 740 YHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFK 799
           +HSEKLA+AFG+++ P G  IR+ KNLRVCGDCHTA K+IS +  R I+LRD++RFHHFK
Sbjct: 301 HHSEKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHHFK 360

Query: 800 AGNCSCGDYW 809
            G CSCGDYW
Sbjct: 361 DGQCSCGDYW 370



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 2/190 (1%)

Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
           IL ACA+V+A + G QVH  I+  GFE +V V + L+DMY KCG ++ A+ +       +
Sbjct: 4   ILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPD 63

Query: 301 EVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVH 359
             SWN+MI G A+ G  KEA+ LF++M    +K +  T+  VL+ C  + +         
Sbjct: 64  VASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFD 123

Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSY 418
           S+    G        + ++D++ + G LD A    N M  + +   W SL+  C  HG+ 
Sbjct: 124 SMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNI 183

Query: 419 EEALKYFSDM 428
           E A +    +
Sbjct: 184 ELAERAVEQL 193



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 100/191 (52%), Gaps = 2/191 (1%)

Query: 342 VLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKD 401
           +L   AS   L   K VH+ I+K GFE    V+N L+DMY K G ++ A  VF+ + + D
Sbjct: 4   ILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLLEPD 63

Query: 402 VISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
           V SW ++I+G A HG  +EA+  F  M  +G+ P+ +    +LS C+   +++ G+    
Sbjct: 64  VASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFD 123

Query: 462 VFLKSGGCSSLSVDNS-LVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGKG 519
              +  G S  +   S +V ++ + GC+++A    + M    +   W +L+  C  +G  
Sbjct: 124 SMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNI 183

Query: 520 KEALQFYDQML 530
           + A +  +Q++
Sbjct: 184 ELAERAVEQLI 194



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 131/319 (41%), Gaps = 55/319 (17%)

Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
           +  +LR C+    L++G+Q H   IK  F+L+  V  GLVDMY KC  I +A+ +F    
Sbjct: 1   MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLL 60

Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGA 255
           +  +  +W  MI+G +Q+G G +A+  F  M   GV+ NQ TF  +L+ C+     D G 
Sbjct: 61  E-PDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGR 119

Query: 256 QVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIVGFAR 313
                +    G        S ++D++ + G LD A   +    ++   S W S++     
Sbjct: 120 NYFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRV 179

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
            G                                 NI+L   ++V  LI  T      +V
Sbjct: 180 HG---------------------------------NIELAE-RAVEQLIELTPENPGTYV 205

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDV-----ISWTSL-------ITGCAYHGSYEEA 421
              L ++YA  G  D A  V  +M+D+ V      SW  +       I G + H   EE 
Sbjct: 206 --LLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSWIEVQNKVHPFIVGDSSHPQIEEI 263

Query: 422 LKYFS----DMRISGICPD 436
            +        M+ +G  P+
Sbjct: 264 YETLETLTLQMKAAGYIPN 282



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 13/144 (9%)

Query: 71  NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
           N ++  Y   GR+ +A+++F++    +  +W+++I G + +G   EA  LF QM   G +
Sbjct: 37  NGLVDMYGKCGRIEDAQEVFSKLLEPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVK 96

Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQF-------HGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           P+Q T   VL  CS  GL+  G  +       HG + K      A   + +VD++ +  C
Sbjct: 97  PNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDHGISPK------AEHYSCMVDLFGRAGC 150

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMI 207
           + EA       P   N   W +++
Sbjct: 151 LDEALNFINQMPVEPNASVWGSLL 174


>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
          Length = 587

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 232/583 (39%), Positives = 348/583 (59%), Gaps = 3/583 (0%)

Query: 230 GVESNQFTFPSILTACAAVSARD-FGAQVHGCILSSGF-EANVYVQSALIDMYAKCGDLD 287
           G+  N FTFPS   A A+   R   G Q+H   +  G+   + +V  A +DMY K G L 
Sbjct: 5   GLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLK 64

Query: 288 SARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFA 347
            AR L       N V+WN+++      G   E +  +  +       +  +  +  N  A
Sbjct: 65  LARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACA 124

Query: 348 SNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTS 407
             + L+  +  H  +VK GFE    V N+++D Y K      A  VF+ M  ++ +SW S
Sbjct: 125 GAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCS 184

Query: 408 LITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG 467
           ++   A +G+ EEA   +   R SG  P   +VSS L+ CA L  L  G+ +HAV ++S 
Sbjct: 185 MVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSC 244

Query: 468 GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYD 527
             +++ V ++LV +Y KCGC+ DA ++F     R+++TW A+I G A  G  + AL  +D
Sbjct: 245 IDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFD 304

Query: 528 QMLARG-TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGR 586
            M+  G T P+YIT V ++ +CS  GL ++    FE+M + +GI+P  +HYAC++DLLGR
Sbjct: 305 DMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGR 364

Query: 587 SGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQL 646
           +G   +A  ++  M   P  +VW ALL AC++HG  ELG  AA  LFEL+P ++  +V L
Sbjct: 365 AGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLL 424

Query: 647 SNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKI 706
           SNM+++AG+W +A  +RK MK+ GI+K+PGCSWV   + VH+F ++D  H +  +I + +
Sbjct: 425 SNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALL 484

Query: 707 DEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNL 766
            ++   ++ AGY+PD  ++L+++EEE KE  +  HSEKLA+AFGL+ +P G PIRI KNL
Sbjct: 485 SKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGVPIRIMKNL 544

Query: 767 RVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
           R+C DCH A K+IS +  R II+RD+NRFHHFK   CSCGDYW
Sbjct: 545 RICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 587



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 123/433 (28%), Positives = 210/433 (48%), Gaps = 22/433 (5%)

Query: 66  DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
           D F     +  Y  +GRL+ A+ LF E P +N   W++++      G  +E  E ++ ++
Sbjct: 46  DPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLR 105

Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
             G  P+  +       C+    L  GEQFHG+ +K  F+++  V+  +VD Y KC+C  
Sbjct: 106 EAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAG 165

Query: 186 EAEYLFKMFPDG---KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSIL 242
           +A  +F    DG   +N V+W +M+  Y+QNG   +A   +   R  G E   F   S L
Sbjct: 166 KARAVF----DGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSAL 221

Query: 243 TACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
           T CA +     G  +H   + S  +AN++V SAL+DMY KCG ++ A ++   +   N V
Sbjct: 222 TTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLV 281

Query: 303 SWNSMIVGFARQGFHKEALSLFKKM-HARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHS 360
           +WN+MI G+A  G  + AL +F  M  + +   +  T  +V+ +C    +  +  +   +
Sbjct: 282 TWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFET 341

Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYE 419
           +  + G E        ++D+  + G  + A+ V   M  +  IS W +L+  C  HG  E
Sbjct: 342 MRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTE 401

Query: 420 ----EALKYFS-DMRISGICPDHVVVSSILSAC---AELTVLEFGQQVHAVFLKSGGCSS 471
                A K F  D + SG   +HV++S++ ++    AE T +   +  +    K  GCS 
Sbjct: 402 LGRIAAEKLFELDPQDSG---NHVLLSNMFASAGRWAEATDIR-KEMKNVGIKKDPGCSW 457

Query: 472 LSVDNSLVLVYAK 484
           ++  N + +  AK
Sbjct: 458 VTWKNVVHVFRAK 470



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 192/396 (48%), Gaps = 6/396 (1%)

Query: 128 GYRPSQYTLDNVLRLC-SLKGLLQRGEQFHGYAIKTCF-DLNAFVVTGLVDMYAKCKCIF 185
           G RP+ +T  +  +   S       G Q H  AI+  +  ++ FV    +DMY K   + 
Sbjct: 5   GLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLK 64

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A +LF   P+ +N VAW  ++T    +G   + IE +  +R  G   N  +  +   AC
Sbjct: 65  LARHLFGEMPN-RNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNAC 123

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A       G Q HG ++  GFE +V V ++++D Y KC     AR + +   + N VSW 
Sbjct: 124 AGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWC 183

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           SM+  +A+ G  +EA + +        +  DF   S L   A  + L+  +++H++ V++
Sbjct: 184 SMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRS 243

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
             +   FV +AL+DMY K G ++ A  +F     +++++W ++I G A+ G  + AL  F
Sbjct: 244 CIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVF 303

Query: 426 SDMRISG-ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL-VYA 483
            DM  SG   P+++ + +++++C+   + + G ++     +  G    +   + V+ +  
Sbjct: 304 DDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLG 363

Query: 484 KCGCINDANRVFDSMHTRDVIT-WTALIMGCAQNGK 518
           + G    A  V   M  R  I+ W AL+  C  +GK
Sbjct: 364 RAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGK 399



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 14/203 (6%)

Query: 42  ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNET-----PF 95
           ALVD +   G +++A Q+F +   R+  TWN MI  YA+ G  + A  +F++        
Sbjct: 254 ALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETA 313

Query: 96  KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRG-E 153
            N+ T  ++I   S  GL  + +ELF  M+   G  P       V+ L    G+ ++  E
Sbjct: 314 PNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYE 373

Query: 154 QFHGYAIKTCFDLNAFVVTGLVDMYAKCKC-IFEAEYLFKMFP-DGKNHVAWTTMITGYS 211
              G  ++    +    + G   M+ K +     AE LF++ P D  NHV  + M   ++
Sbjct: 374 VIQGMPMRPSISVWG-ALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNM---FA 429

Query: 212 QNGYGFKAIECFRDMRVEGVESN 234
             G   +A +  ++M+  G++ +
Sbjct: 430 SAGRWAEATDIRKEMKNVGIKKD 452



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 1/93 (1%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D + F  + ++  Y   G + +A+++F ETP +N  TW+++I GY++ G    A  +F  
Sbjct: 246 DANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDD 305

Query: 124 MQLEG-YRPSQYTLDNVLRLCSLKGLLQRGEQF 155
           M   G   P+  TL NV+  CS  GL + G + 
Sbjct: 306 MIRSGETAPNYITLVNVITSCSRGGLTKDGYEL 338


>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
 gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 843

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 232/655 (35%), Positives = 380/655 (58%), Gaps = 1/655 (0%)

Query: 64  DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
           D D F  + +I  YAN G L +A+++F+    ++   W+ ++ GY   G    A ELF  
Sbjct: 178 DGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGD 237

Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
           M+  G  P+  TL   L + + +  L  G Q H  A+K   +    V   LV MYAKCKC
Sbjct: 238 MRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKC 297

Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
           + +   LF + P   + V W  MI+G  QNG+  +A+  F DM+  G+  +  T  S+L 
Sbjct: 298 LDDGWKLFGLMPR-DDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLP 356

Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
           A   ++  + G ++HG I+ +    +V++ SAL+D+Y KC  +  A+ + + S+  + V 
Sbjct: 357 ALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVI 416

Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
            ++MI G+   G  +EA+ +F+ +  + I+ +     SVL   AS   +   + +HS  +
Sbjct: 417 GSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYAL 476

Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
           K  +EG  +V +AL+DMYAK G LD +  +F+ +  KD ++W S+I+  A +G  EEAL 
Sbjct: 477 KNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALN 536

Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
            F +M + G+   +V +SS+LSACA L  + +G+++H V +K    + L  +++L+ +Y 
Sbjct: 537 LFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYG 596

Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
           KCG +  A+RVF+SM  ++ ++W ++I      G  KE++     M   G K D++TF+ 
Sbjct: 597 KCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLA 656

Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
           L+ AC+HAG  +     F  M + Y I P  +H+ACM+DL  R+GKL +A  L+  M  +
Sbjct: 657 LVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFK 716

Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
           PDA +W ALL ACRVH ++EL E A+  LF+L+P N+  YV +SN+ + AG+W+  ++VR
Sbjct: 717 PDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVR 776

Query: 664 KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGY 718
           +LMK   ++K PG SWV+ N+  H+F++ D+ HP   DIY  +  I+L ++E G+
Sbjct: 777 RLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLKSILLELREEGH 831



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 164/570 (28%), Positives = 268/570 (47%), Gaps = 78/570 (13%)

Query: 20  IGPARYTHNVGNSVKPASDL--NRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAA 76
           I   R  H    ++    D+    AL+  ++N G + +A Q+F+ M++RD   WN M+  
Sbjct: 162 IALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDG 221

Query: 77  YANSGRLREAKKLFNETPFK----NFFTW----------SSLIYGYS------NYGLDIE 116
           Y  +G +  A +LF +        NF T           S L +G         YGL+ E
Sbjct: 222 YVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESE 281

Query: 117 -------------------AFELF----------WQMQLEG------------------- 128
                               ++LF          W   + G                   
Sbjct: 282 VAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQK 341

Query: 129 --YRPSQYTLDNVL-RLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
              RP   TL ++L  L  L G  Q G++ HGY ++ C  ++ F+V+ LVD+Y KC+ + 
Sbjct: 342 SGIRPDSVTLVSLLPALTDLNGFNQ-GKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVR 400

Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
            A+ ++       + V  +TMI+GY  NG   +A++ FR +  +G+  N     S+L AC
Sbjct: 401 MAQSVYDS-SKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPAC 459

Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
           A+++A   G ++H   L + +E   YV+SAL+DMYAKCG LD +  +       +EV+WN
Sbjct: 460 ASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWN 519

Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
           SMI  FA+ G  +EAL+LF++M    +K  + T  SVL+  AS   +   K +H +++K 
Sbjct: 520 SMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKG 579

Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
                 F  +ALIDMY K GNL+ A  VF  M +K+ +SW S+I     +G  +E++   
Sbjct: 580 PIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLL 639

Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAK 484
             M+  G   DHV   +++SACA    ++ G ++     +    +  +     +V +Y++
Sbjct: 640 RHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSR 699

Query: 485 CGCINDANRVFDSMHTR-DVITWTALIMGC 513
            G ++ A  +   M  + D   W AL+  C
Sbjct: 700 AGKLDKAMELIVDMPFKPDAGIWGALLHAC 729



 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 149/522 (28%), Positives = 250/522 (47%), Gaps = 15/522 (2%)

Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFD-LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
           VLR C     L  G Q HG A+       +  + T LV MY   +   +A  +F   P G
Sbjct: 45  VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104

Query: 198 KNHVA--WTTMITGYSQNGYGFKAIECFRDM--RVEGVESNQFTFPSILTACAAVSARDF 253
               A  W  +I G +  G    A+  +  M         +  TFP ++ +CAA+ A   
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIAL 164

Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
           G  VH    + G + +++V SALI MYA  G L  AR++ +     + V WN M+ G+ +
Sbjct: 165 GRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVK 224

Query: 314 QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
            G    A+ LF  M A   + +  T    L+  A+  DL     +H+L VK G E    V
Sbjct: 225 AGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAV 284

Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
            N L+ MYAK   LD  + +F LM   D+++W  +I+GC  +G  ++AL  F DM+ SGI
Sbjct: 285 ANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGI 344

Query: 434 CPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANR 493
            PD V + S+L A  +L     G+++H   +++     + + ++LV +Y KC  +  A  
Sbjct: 345 RPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQS 404

Query: 494 VFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC-SHAG 552
           V+DS    DV+  + +I G   NG  +EA++ +  +L +G +P+ +    +L AC S A 
Sbjct: 405 VYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAA 464

Query: 553 LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
           +      +  ++   Y  +   +  + ++D+  + G+L  +  +  + +   D   W ++
Sbjct: 465 MKLGQELHSYALKNAYEGRCYVE--SALMDMYAKCGRLDLSHYIFSK-ISAKDEVTWNSM 521

Query: 613 LSACRVHGDLELGERAANNLFELEPMNAMPY--VQLSNMYST 652
           +S+   +G+ E     A NLF    M  + Y  V +S++ S 
Sbjct: 522 ISSFAQNGEPE----EALNLFREMCMEGVKYSNVTISSVLSA 559



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 210/404 (51%), Gaps = 32/404 (7%)

Query: 32  SVKPA-SDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF 90
           S+ PA +DLN     F+   E+   G +       D F  + ++  Y     +R A+ ++
Sbjct: 353 SLLPALTDLN----GFNQGKELH--GYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVY 406

Query: 91  NETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQ 150
           + +   +    S++I GY   G+  EA ++F  +  +G RP+   + +VL  C+    ++
Sbjct: 407 DSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMK 466

Query: 151 RGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
            G++ H YA+K  ++   +V + L+DMYAKC  +  + Y+F      K+ V W +MI+ +
Sbjct: 467 LGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKI-SAKDEVTWNSMISSF 525

Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV 270
           +QNG   +A+  FR+M +EGV+ +  T  S+L+ACA++ A  +G ++HG ++     A++
Sbjct: 526 AQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADL 585

Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
           + +SALIDMY KCG+L+ A R+ E     NEVSWNS+I  +   G  KE++SL + M   
Sbjct: 586 FAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEE 645

Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN------------ALI 378
             K D  T+ ++++  A           H+  V+ G   ++ +               ++
Sbjct: 646 GFKADHVTFLALVSACA-----------HAGQVQEGLRLFRCMTEEYQIAPRMEHFACMV 694

Query: 379 DMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
           D+Y++ G LD A  ++ ++    D   W +L+  C  H + E A
Sbjct: 695 DLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELA 738


>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 705

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 215/567 (37%), Positives = 338/567 (59%), Gaps = 14/567 (2%)

Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS------WNSMIV 309
           Q+H  IL  G   N  V +      +    +  A  +L  ++            +N++I 
Sbjct: 140 QIHSLILKLGLHHNPLVLTKFAATSSHFNAVHYASSVLFPNDQTTPPPSHDAFLFNTLIR 199

Query: 310 GFARQGFHK-EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
            FA+    K  AL  +  M    +  + FT+P VL   A  + L    +VH+ +VK GFE
Sbjct: 200 AFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHASMVKFGFE 259

Query: 369 GYKFVNNALIDMY------AKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
               V N L+ MY         G +  A  VF+    KD ++W+++I G A  G+   A+
Sbjct: 260 EDPHVRNTLVHMYCCCCQDGSSGPVS-AKKVFDESPVKDSVTWSAMIGGYARAGNSARAV 318

Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
             F +M+++G+CPD + + S+LSACA+L  LE G+ + +   +     S+ + N+L+ ++
Sbjct: 319 TLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVELCNALIDMF 378

Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
           AKCG ++ A +VF  M  R +++WT++I+G A +G+G EA+  +D+M+ +G  PD + F+
Sbjct: 379 AKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVAFI 438

Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
           G+L ACSH+GL +   +YF +M+ ++ I P  +HY CM+D+L R+G++ EA   +  M  
Sbjct: 439 GVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRAMPV 498

Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
           EP+  +W+++++AC   G+L+LGE  A  L   EP +   YV LSN+Y+   +WE   +V
Sbjct: 499 EPNQVIWRSIVTACHARGELKLGESVAKELIRREPSHESNYVLLSNIYAKLLRWEKKTKV 558

Query: 663 RKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDM 722
           R++M  +G+RK PG + +E N++++ F++ D+ H    +IY  ++E+   IK AGYVP  
Sbjct: 559 REMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQYKEIYEMVEEMGREIKRAGYVPTT 618

Query: 723 NFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAV 782
           +  L +++EE KE  L  HSEKLA+AF LL+ P G PIRI KNLRVC DCH+A K+IS V
Sbjct: 619 SQVLLDIDEEDKEDALYRHSEKLAIAFALLSTPPGTPIRIVKNLRVCEDCHSATKFISKV 678

Query: 783 YLRHIILRDSNRFHHFKAGNCSCGDYW 809
           Y R I++RD NRFHHFK G CSCGD+W
Sbjct: 679 YNREIVVRDRNRFHHFKNGLCSCGDFW 705



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 163/337 (48%), Gaps = 21/337 (6%)

Query: 94  PFKNFFTWSSLIYGYSNYGLD-IEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
           P  + F +++LI  ++        A   +  M+     P+++T   VL+ C+    L+ G
Sbjct: 187 PSHDAFLFNTLIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELG 246

Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKC-----KCIFEAEYLFKMFPDGKNHVAWTTMI 207
              H   +K  F+ +  V   LV MY  C          A+ +F   P  K+ V W+ MI
Sbjct: 247 GAVHASMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESP-VKDSVTWSAMI 305

Query: 208 TGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFE 267
            GY++ G   +A+  FR+M+V GV  ++ T  S+L+ACA + A + G  +   I      
Sbjct: 306 GGYARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIM 365

Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM 327
            +V + +ALIDM+AKCGD+D A ++    ++   VSW SMIVG A  G   EA+ +F +M
Sbjct: 366 RSVELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEM 425

Query: 328 HARDIKIDDFTYPSVLN-CFASNID------LNNAKSVHSLIVKTGFEGYKFVNNALIDM 380
             + +  DD  +  VL+ C  S +        N  +++ S++ K    G       ++DM
Sbjct: 426 MEQGVDPDDVAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYG------CMVDM 479

Query: 381 YAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHG 416
            ++ G ++ A      M  + + + W S++T C   G
Sbjct: 480 LSRAGRVNEALEFVRAMPVEPNQVIWRSIVTACHARG 516



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 140/277 (50%), Gaps = 12/277 (4%)

Query: 64  DRDGFTWNTMIAAY------ANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEA 117
           + D    NT++  Y       +SG +  AKK+F+E+P K+  TWS++I GY+  G    A
Sbjct: 259 EEDPHVRNTLVHMYCCCCQDGSSGPV-SAKKVFDESPVKDSVTWSAMIGGYARAGNSARA 317

Query: 118 FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
             LF +MQ+ G  P + T+ +VL  C+  G L+ G+    Y  +     +  +   L+DM
Sbjct: 318 VTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVELCNALIDM 377

Query: 178 YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
           +AKC  +  A  +F+     +  V+WT+MI G + +G G +A+  F +M  +GV+ +   
Sbjct: 378 FAKCGDVDRAVKVFREM-KVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVDPDDVA 436

Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ--SALIDMYAKCGDLDSARRLLEY 295
           F  +L+AC+     D G   +   + + F     ++    ++DM ++ G ++ A   +  
Sbjct: 437 FIGVLSACSHSGLVDKG-HYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNEALEFVRA 495

Query: 296 SEID-NEVSWNSMIVGFARQGFHKEALSLFKKMHARD 331
             ++ N+V W S++     +G  K   S+ K++  R+
Sbjct: 496 MPVEPNQVIWRSIVTACHARGELKLGESVAKELIRRE 532


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.323    0.137    0.425 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,785,538,949
Number of Sequences: 23463169
Number of extensions: 537556118
Number of successful extensions: 1389911
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9204
Number of HSP's successfully gapped in prelim test: 2737
Number of HSP's that attempted gapping in prelim test: 1127299
Number of HSP's gapped (non-prelim): 82295
length of query: 809
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 658
effective length of database: 8,816,256,848
effective search space: 5801097005984
effective search space used: 5801097005984
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 81 (35.8 bits)