BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003584
(809 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 564 bits (1453), Expect = e-159, Method: Compositional matrix adjust.
Identities = 277/742 (37%), Positives = 446/742 (60%), Gaps = 8/742 (1%)
Query: 71 NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
+++ Y ++ +K+F+E +N TW++LI GY+ ++ E LF +MQ EG +
Sbjct: 132 TSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQ 191
Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
P+ +T L + + +G+ RG Q H +K D V L+++Y KC + +A L
Sbjct: 192 PNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARIL 251
Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
F + K+ V W +MI+GY+ NG +A+ F MR+ V ++ +F S++ CA +
Sbjct: 252 FDK-TEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKE 310
Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKC-GDLDSARRLLEYSEIDNEVSWNSMIV 309
F Q+H ++ GF + +++AL+ Y+KC LD+ R E + N VSW +MI
Sbjct: 311 LRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMIS 370
Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
GF + +EA+ LF +M + ++ ++FTY +L + + + VH+ +VKT +E
Sbjct: 371 GFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA----LPVISPSEVHAQVVKTNYER 426
Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
V AL+D Y K G ++ A VF+ + DKD+++W++++ G A G E A+K F ++
Sbjct: 427 SSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELT 486
Query: 430 ISGICPDHVVVSSILSACAELTV-LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCI 488
GI P+ SSIL+ CA + G+Q H +KS SSL V ++L+ +YAK G I
Sbjct: 487 KGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNI 546
Query: 489 NDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC 548
A VF +D+++W ++I G AQ+G+ +AL + +M R K D +TF+G+ AC
Sbjct: 547 ESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAAC 606
Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
+HAGL E YF+ M + I P +H +CM+DL R+G+L +A +++ M +T+
Sbjct: 607 THAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTI 666
Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
W+ +L+ACRVH ELG AA + ++P ++ YV LSNMY+ +G W++ A+VRKLM
Sbjct: 667 WRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNE 726
Query: 669 RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHN 728
R ++KEPG SW+E ++ + F++ DR HPL+ IY K++++ +K+ GY PD ++ L +
Sbjct: 727 RNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQD 786
Query: 729 VEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHII 788
+++E KE LA HSE+LA+AFGL+ P+G+P+ I KNLRVCGDCH +K I+ + R I+
Sbjct: 787 IDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIV 846
Query: 789 LRDSNRFHHFKA-GNCSCGDYW 809
+RDSNRFHHF + G CSCGD+W
Sbjct: 847 VRDSNRFHHFSSDGVCSCGDFW 868
Score = 243 bits (621), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 157/549 (28%), Positives = 280/549 (51%), Gaps = 19/549 (3%)
Query: 79 NSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDN 138
+S RL A LF+++P ++ ++ SL++G+S G EA LF + G +
Sbjct: 39 SSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSS 98
Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
VL++ + G Q H IK F + V T LVD Y K + +F + +
Sbjct: 99 VLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKE-R 157
Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
N V WTT+I+GY++N + + F M+ EG + N FTF + L A G QVH
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
++ +G + + V ++LI++Y KCG++ AR L + +E+ + V+WNSMI G+A G
Sbjct: 218 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 277
Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
EAL +F M +++ + ++ SV+ A+ +L + +H +VK GF + + AL+
Sbjct: 278 EALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALM 337
Query: 379 DMYAK-QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
Y+K LD + + +V+SWT++I+G + EEA+ FS+M+ G+ P+
Sbjct: 338 VAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNE 397
Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
S IL+A ++ E VHA +K+ S +V +L+ Y K G + +A +VF
Sbjct: 398 FTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSG 453
Query: 498 MHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC--SHAGLAE 555
+ +D++ W+A++ G AQ G+ + A++ + ++ G KP+ TF +L C ++A + +
Sbjct: 454 IDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQ 513
Query: 556 NARWYFESMDKVYGIKPGPDHYAC----MIDLLGRSGKLIEAKALLDQMVGEPDATVWKA 611
+++ + IK D C ++ + + G + A+ + + E D W +
Sbjct: 514 GKQFHG------FAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ-REKDLVSWNS 566
Query: 612 LLSACRVHG 620
++S HG
Sbjct: 567 MISGYAQHG 575
Score = 233 bits (593), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 145/504 (28%), Positives = 264/504 (52%), Gaps = 43/504 (8%)
Query: 21 GPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
G +T V N + ++ +L++ + G + +A LF+K + TWN+MI+
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMIS---- 268
Query: 80 SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
GY+ GLD+EA +F+ M+L R S+ + +V
Sbjct: 269 ---------------------------GYAANGLDLEALGMFYSMRLNYVRLSESSFASV 301
Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKN 199
++LC+ L+ EQ H +K F + + T L+ Y+KC + +A LFK N
Sbjct: 302 IKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGN 361
Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG 259
V+WT MI+G+ QN +A++ F +M+ +GV N+FT+ ILTA +S ++VH
Sbjct: 362 VVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVHA 417
Query: 260 CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE--VSWNSMIVGFARQGFH 317
++ + +E + V +AL+D Y K G ++ A ++ +S ID++ V+W++M+ G+A+ G
Sbjct: 418 QVVKTNYERSSTVGTALLDAYVKLGKVEEAAKV--FSGIDDKDIVAWSAMLAGYAQTGET 475
Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
+ A+ +F ++ IK ++FT+ S+LN C A+N + K H +K+ + V++A
Sbjct: 476 EAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSA 535
Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
L+ MYAK+GN++ A VF ++KD++SW S+I+G A HG +AL F +M+ + D
Sbjct: 536 LLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMD 595
Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS-LVLVYAKCGCINDANRVF 495
V + +AC ++E G++ + ++ + NS +V +Y++ G + A +V
Sbjct: 596 GVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVI 655
Query: 496 DSM-HTRDVITWTALIMGCAQNGK 518
++M + W ++ C + K
Sbjct: 656 ENMPNPAGSTIWRTILAACRVHKK 679
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 228/442 (51%), Gaps = 10/442 (2%)
Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
++ A LF P G++ ++ +++ G+S++G +A F ++ G+E + F S+L
Sbjct: 43 LYNAHNLFDKSP-GRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLK 101
Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
A + FG Q+H + GF +V V ++L+D Y K + R++ + + N V+
Sbjct: 102 VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVT 161
Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
W ++I G+AR + E L+LF +M + + FT+ + L A VH+++V
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVV 221
Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
K G + V+N+LI++Y K GN+ A ++F+ + K V++W S+I+G A +G EAL
Sbjct: 222 KNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALG 281
Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
F MR++ + +S++ CA L L F +Q+H +K G ++ +L++ Y+
Sbjct: 282 MFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYS 341
Query: 484 KCGCINDANRVFDSMH-TRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
KC + DA R+F + +V++WTA+I G QN +EA+ + +M +G +P+ T+
Sbjct: 342 KCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYS 401
Query: 543 GLLFACSHAGLAE-NARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMV 601
+L A +E +A+ + ++ + ++D + GK+ EA + +
Sbjct: 402 VILTALPVISPSEVHAQVVKTNYERSSTVG------TALLDAYVKLGKVEEAAKVFSG-I 454
Query: 602 GEPDATVWKALLSACRVHGDLE 623
+ D W A+L+ G+ E
Sbjct: 455 DDKDIVAWSAMLAGYAQTGETE 476
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 564 bits (1453), Expect = e-159, Method: Compositional matrix adjust.
Identities = 285/744 (38%), Positives = 440/744 (59%), Gaps = 1/744 (0%)
Query: 66 DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
D + N +++ Y + G L A+ +F+ ++ T+++LI G S G +A ELF +M
Sbjct: 322 DTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH 381
Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
L+G P TL +++ CS G L RG+Q H Y K F N + L+++YAKC I
Sbjct: 382 LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADI- 440
Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
E + + + +N V W M+ Y + FR M++E + NQ+T+PSIL C
Sbjct: 441 ETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 500
Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
+ + G Q+H I+ + F+ N YV S LIDMYAK G LD+A +L + VSW
Sbjct: 501 IRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWT 560
Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
+MI G+ + F +AL+ F++M R I+ D+ + ++ A L + +H+ +
Sbjct: 561 TMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS 620
Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
GF NAL+ +Y++ G ++ +++ F + D I+W +L++G G+ EEAL+ F
Sbjct: 621 GFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVF 680
Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
M GI ++ S + A +E ++ G+QVHAV K+G S V N+L+ +YAKC
Sbjct: 681 VRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKC 740
Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
G I+DA + F + T++ ++W A+I +++G G EAL +DQM+ +P+++T VG+L
Sbjct: 741 GSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVL 800
Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
ACSH GL + YFESM+ YG+ P P+HY C++D+L R+G L AK + +M +PD
Sbjct: 801 SACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPD 860
Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
A VW+ LLSAC VH ++E+GE AA++L ELEP ++ YV LSN+Y+ + KW+ R+
Sbjct: 861 ALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQK 920
Query: 666 MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFA 725
MK +G++KEPG SW+E + +H F D+ HPL +I+ ++ E GYV D
Sbjct: 921 MKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSL 980
Query: 726 LHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLR 785
L+ ++ E K+ + HSEKLA++FGLL+LP PI + KNLRVC DCH +K++S V R
Sbjct: 981 LNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNR 1040
Query: 786 HIILRDSNRFHHFKAGNCSCGDYW 809
II+RD+ RFHHF+ G CSC DYW
Sbjct: 1041 EIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 241 bits (615), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 163/592 (27%), Positives = 283/592 (47%), Gaps = 16/592 (2%)
Query: 46 FSNSGEIDEAGQLFEKMS----DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTW 101
+G +DE +L ++ D +G + Y G L A K+F+E P + FTW
Sbjct: 95 LKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTW 154
Query: 102 SSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL-LQRGEQFHGYAI 160
+ +I ++ L E F LF +M E P++ T VL C + EQ H +
Sbjct: 155 NKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIL 214
Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG---KNHVAWTTMITGYSQNGYGF 217
+ V L+D+Y++ + A +F DG K+H +W MI+G S+N
Sbjct: 215 YQGLRDSTVVCNPLIDLYSRNGFVDLARRVF----DGLRLKDHSSWVAMISGLSKNECEA 270
Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
+AI F DM V G+ + F S+L+AC + + + G Q+HG +L GF ++ YV +AL+
Sbjct: 271 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALV 330
Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
+Y G+L SA + + V++N++I G ++ G+ ++A+ LFK+MH ++ D
Sbjct: 331 SLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSN 390
Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
T S++ +++ L + +H+ K GF + AL+++YAK +++ A F
Sbjct: 391 TLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET 450
Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
+ ++V+ W ++ + + F M+I I P+ SIL C L LE G+
Sbjct: 451 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 510
Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
Q+H+ +K+ + V + L+ +YAK G ++ A + +DV++WT +I G Q
Sbjct: 511 QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 570
Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSH-AGLAENARWYFESMDKVYGIKPGPDH 576
+AL + QML RG + D + + AC+ L E + + ++ V G
Sbjct: 571 FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC--VSGFSSDLPF 628
Query: 577 YACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
++ L R GK+ E+ +Q D W AL+S + G+ E R
Sbjct: 629 QNALVTLYSRCGKIEESYLAFEQTEA-GDNIAWNALVSGFQQSGNNEEALRV 679
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 134/291 (46%), Gaps = 18/291 (6%)
Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
C +N L+ + +HS I+K G + ++ L D Y +G+L AF VF+ M ++ + +
Sbjct: 94 CLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFT 153
Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV-LEFGQQVHAVF 463
W +I A E F M + P+ S +L AC +V + +Q+HA
Sbjct: 154 WNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARI 213
Query: 464 LKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEAL 523
L G S V N L+ +Y++ G ++ A RVFD + +D +W A+I G ++N EA+
Sbjct: 214 LYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAI 273
Query: 524 QFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG--IKPG--PDHYAC 579
+ + M G P F +L AC E ++++G +K G D Y C
Sbjct: 274 RLFCDMYVLGIMPTPYAFSSVLSACKKIE-------SLEIGEQLHGLVLKLGFSSDTYVC 326
Query: 580 --MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERA 628
++ L G LI A+ + M + DA + L++ G GE+A
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNM-SQRDAVTYNTLINGLSQCG---YGEKA 373
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 155/376 (41%), Gaps = 47/376 (12%)
Query: 36 ASDL---NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE 92
+SDL N + +S G+I+E+ FE+ D WN +++ + SG NE
Sbjct: 623 SSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGN--------NE 674
Query: 93 TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
EA +F +M EG + +T + ++ S +++G
Sbjct: 675 -----------------------EALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQG 711
Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
+Q H KT +D V L+ MYAKC I +AE F + KN V+W +I YS+
Sbjct: 712 KQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQF-LEVSTKNEVSWNAIINAYSK 770
Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVY 271
+G+G +A++ F M V N T +L+AC+ + D G + S G
Sbjct: 771 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPE 830
Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMIVGFARQGFHKE-ALSLFKKMHA 329
++DM + G L A+ ++ I + + W +++ HK + F H
Sbjct: 831 HYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACV---VHKNMEIGEFAAHHL 887
Query: 330 RDIKIDD-FTYPSVLNCFASNI-----DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK 383
+++ +D TY + N +A + DL K + K + + V N++ Y
Sbjct: 888 LELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVG 947
Query: 384 QGNLDCAFMVFNLMQD 399
N A + QD
Sbjct: 948 DQNHPLADEIHEYFQD 963
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 556 bits (1434), Expect = e-157, Method: Compositional matrix adjust.
Identities = 290/758 (38%), Positives = 447/758 (58%), Gaps = 23/758 (3%)
Query: 71 NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
NT++ Y G K+F+ +N +W+SLI ++ A E F M E
Sbjct: 137 NTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE 196
Query: 131 PSQYTLDNVLRLCS---LKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
PS +TL +V+ CS + L G+Q H Y ++ +LN+F++ LV MY K + +
Sbjct: 197 PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASS 255
Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
+ L F G++ V W T+++ QN +A+E R+M +EGVE ++FT S+L AC+
Sbjct: 256 KVLLGSF-GGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSH 314
Query: 248 VSARDFGAQVHGCILSSG-FEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-WN 305
+ G ++H L +G + N +V SAL+DMY C + S RR+ + D ++ WN
Sbjct: 315 LEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD-GMFDRKIGLWN 373
Query: 306 SMIVGFARQGFHKEALSLFKKMH-ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
+MI G+++ KEAL LF M + + + T V+ + + +++H +VK
Sbjct: 374 AMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVK 433
Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
G + +FV N L+DMY++ G +D A +F M+D+D+++W ++ITG + +E+AL
Sbjct: 434 RGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLL 493
Query: 425 FSDM------------RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
M R+S + P+ + + +IL +CA L+ L G+++HA +K+ + +
Sbjct: 494 LHKMQNLERKVSKGASRVS-LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDV 552
Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
+V ++LV +YAKCGC+ + +VFD + ++VITW +IM +G G+EA+ M+ +
Sbjct: 553 AVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQ 612
Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIE 592
G KP+ +TF+ + ACSH+G+ + F M YG++P DHYAC++DLLGR+G++ E
Sbjct: 613 GVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKE 672
Query: 593 AKALLDQMVGE-PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYS 651
A L++ M + A W +LL A R+H +LE+GE AA NL +LEP A YV L+N+YS
Sbjct: 673 AYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYS 732
Query: 652 TAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIML 711
+AG W+ A VR+ MK +G+RKEPGCSW+E +VH F++ D HP + ++ +
Sbjct: 733 SAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWE 792
Query: 712 LIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGD 771
+++ GYVPD + LHNVEE+ KEI L HSEKLA+AFG+L G IR+ KNLRVC D
Sbjct: 793 RMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCND 852
Query: 772 CHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
CH A K+IS + R IILRD RFH FK G CSCGDYW
Sbjct: 853 CHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 216 bits (549), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 152/527 (28%), Positives = 258/527 (48%), Gaps = 23/527 (4%)
Query: 66 DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
+ F NT++A Y G+L +K L ++ TW++++ +EA E +M
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294
Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT-CFDLNAFVVTGLVDMYAKCKCI 184
LEG P ++T+ +VL CS +L+ G++ H YA+K D N+FV + LVDMY CK +
Sbjct: 295 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 354
Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILT 243
+F D K + W MI GYSQN + +A+ F M G+ +N T ++
Sbjct: 355 LSGRRVFDGMFDRKIGL-WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVP 413
Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
AC A +HG ++ G + + +VQ+ L+DMY++ G +D A R+ E + V+
Sbjct: 414 ACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVT 473
Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKI-----------DDFTYPSVLNCFASNIDL 352
WN+MI G+ H++AL L KM + K+ + T ++L A+ L
Sbjct: 474 WNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSAL 533
Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
K +H+ +K V +AL+DMYAK G L + VF+ + K+VI+W +I
Sbjct: 534 AKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAY 593
Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
HG+ +EA+ M + G+ P+ V S+ +AC+ +++ G ++ V G
Sbjct: 594 GMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPS 653
Query: 473 SVDNSLVL-VYAKCGCINDANRVFDSMHTRD---VITWTALIMGCAQNGKGKEALQFYDQ 528
S + V+ + + G I +A ++ + M RD W++L +G ++ E + Q
Sbjct: 654 SDHYACVVDLLGRAGRIKEAYQLMN-MMPRDFNKAGAWSSL-LGASRIHNNLEIGEIAAQ 711
Query: 529 MLARGTKPDYIT-FVGLLFACSHAGLAENARWYFESMDKVYGIKPGP 574
L + +P+ + +V L S AGL + A +M K G++ P
Sbjct: 712 NLIQ-LEPNVASHYVLLANIYSSAGLWDKATEVRRNM-KEQGVRKEP 756
Score = 176 bits (447), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 211/426 (49%), Gaps = 23/426 (5%)
Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
W ++ ++ +A+ + DM V G++ + + FP++L A A + + G Q+H +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 263 SSGFEAN-VYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEAL 321
G+ + V V + L+++Y KCGD + ++ + N+VSWNS+I + AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 322 SLFKKMHARDIKIDDFTYPSVLNCFASNIDLNN----AKSVHSLIVKTGFEGYKFVNNAL 377
F+ M +++ FT SV+ SN+ + K VH+ ++ G E F+ N L
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTA-CSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTL 242
Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
+ MY K G L + ++ +D+++W ++++ + EAL+Y +M + G+ PD
Sbjct: 243 VAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDE 302
Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLS-VDNSLVLVYAKCGCINDANRVFD 496
+SS+L AC+ L +L G+++HA LK+G S V ++LV +Y C + RVFD
Sbjct: 303 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362
Query: 497 SMHTRDVITWTALIMGCAQNGKGKEALQFYDQM-LARGTKPDYITFVGLLFACSHAGLAE 555
M R + W A+I G +QN KEAL + M + G + T G++ AC +G
Sbjct: 363 GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG--- 419
Query: 556 NARWYFESMDKVYG--IKPGPDH----YACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
F + ++G +K G D ++D+ R GK+ A + +M + D W
Sbjct: 420 ----AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM-EDRDLVTW 474
Query: 610 KALLSA 615
+++
Sbjct: 475 NTMITG 480
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 178/405 (43%), Gaps = 50/405 (12%)
Query: 32 SVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF 90
S+ S + ALVD + N ++ ++F+ M DR WN MIA
Sbjct: 333 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA--------------- 377
Query: 91 NETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLL 149
GYS D EA LF M+ G + T+ V+ C G
Sbjct: 378 ----------------GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF 421
Query: 150 QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
R E HG+ +K D + FV L+DMY++ I A +F D ++ V W TMITG
Sbjct: 422 SRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMED-RDLVTWNTMITG 480
Query: 210 YSQNGYGFKAIECFRDM------------RVEGVESNQFTFPSILTACAAVSARDFGAQV 257
Y + + A+ M RV ++ N T +IL +CAA+SA G ++
Sbjct: 481 YVFSEHHEDALLLLHKMQNLERKVSKGASRV-SLKPNSITLMTILPSCAALSALAKGKEI 539
Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
H + + +V V SAL+DMYAKCG L +R++ + N ++WN +I+ + G
Sbjct: 540 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNG 599
Query: 318 KEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
+EA+ L + M + +K ++ T+ SV C S + + + + G E
Sbjct: 600 QEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC 659
Query: 377 LIDMYAKQGNLDCAFMVFNLMQD--KDVISWTSLITGCAYHGSYE 419
++D+ + G + A+ + N+M +W+SL+ H + E
Sbjct: 660 VVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLE 704
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 79/194 (40%), Gaps = 42/194 (21%)
Query: 21 GPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
G + + + N++ + ALVD ++ G + + ++F+++ ++ TWN +I AY
Sbjct: 536 GKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGM 595
Query: 80 SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
G + EA +L M ++G +P++ T +V
Sbjct: 596 HGNGQ-------------------------------EAIDLLRMMMVQGVKPNEVTFISV 624
Query: 140 LRLCSLKGLLQRGEQF-----HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
CS G++ G + Y ++ D A V VD+ + I EA L M
Sbjct: 625 FAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACV----VDLLGRAGRIKEAYQLMNMM 680
Query: 195 PDGKNHV-AWTTMI 207
P N AW++++
Sbjct: 681 PRDFNKAGAWSSLL 694
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 549 bits (1415), Expect = e-155, Method: Compositional matrix adjust.
Identities = 289/745 (38%), Positives = 436/745 (58%), Gaps = 2/745 (0%)
Query: 65 RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
++ F +++ + G + EA ++F K + +++ G++ +A + F +M
Sbjct: 67 QEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRM 126
Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
+ + P Y +L++C + L+ G++ HG +K+ F L+ F +TGL +MYAKC+ +
Sbjct: 127 RYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQV 186
Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
EA +F P+ ++ V+W T++ GYSQNG A+E + M E ++ + T S+L A
Sbjct: 187 NEARKVFDRMPE-RDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPA 245
Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
+A+ G ++HG + SGF++ V + +AL+DMYAKCG L++AR+L + N VSW
Sbjct: 246 VSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSW 305
Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
NSMI + + KEA+ +F+KM +K D + L+ A DL + +H L V+
Sbjct: 306 NSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE 365
Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
G + V N+LI MY K +D A +F +Q + ++SW ++I G A +G +AL Y
Sbjct: 366 LGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNY 425
Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
FS MR + PD S+++A AEL++ + +H V ++S ++ V +LV +YAK
Sbjct: 426 FSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAK 485
Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
CG I A +FD M R V TW A+I G +G GK AL+ +++M KP+ +TF+ +
Sbjct: 486 CGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSV 545
Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
+ ACSH+GL E F M + Y I+ DHY M+DLLGR+G+L EA + QM +P
Sbjct: 546 ISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKP 605
Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
V+ A+L AC++H ++ E+AA LFEL P + +V L+N+Y A WE +VR
Sbjct: 606 AVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRV 665
Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
M +G+RK PGCS VE ++VH F S HP IY+ +++++ IKEAGYVPD N
Sbjct: 666 SMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNL 725
Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
L VE + KE L+ HSEKLA++FGLL G I + KNLRVC DCH A KYIS V
Sbjct: 726 VL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTG 784
Query: 785 RHIILRDSNRFHHFKAGNCSCGDYW 809
R I++RD RFHHFK G CSCGDYW
Sbjct: 785 REIVVRDMQRFHHFKNGACSCGDYW 809
Score = 169 bits (428), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 173/329 (52%), Gaps = 1/329 (0%)
Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
+ +N + P+ L S ++ Q+ + +G + Q+ L+ ++ + G +D A
Sbjct: 31 IPANVYEHPAALLLERCSSLKEL-RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAA 89
Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
R+ E + V +++M+ GFA+ +AL F +M D++ + + +L
Sbjct: 90 RVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEA 149
Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
+L K +H L+VK+GF F L +MYAK ++ A VF+ M ++D++SW +++
Sbjct: 150 ELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVA 209
Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
G + +G AL+ M + P + + S+L A + L ++ G+++H ++SG S
Sbjct: 210 GYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDS 269
Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
+++ +LV +YAKCG + A ++FD M R+V++W ++I QN KEA+ + +ML
Sbjct: 270 LVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML 329
Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARW 559
G KP ++ +G L AC+ G E R+
Sbjct: 330 DEGVKPTDVSVMGALHACADLGDLERGRF 358
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 123/273 (45%), Gaps = 40/273 (14%)
Query: 23 ARYTHNVGNSVKPASDLNRALVD-----FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAY 77
R+ H + SV+ D N ++V+ + E+D A +F K+ R +WN MI +
Sbjct: 356 GRFIHKL--SVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGF 413
Query: 78 ANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLD 137
A +GR I+A F QM+ +P +T
Sbjct: 414 AQNGR-------------------------------PIDALNYFSQMRSRTVKPDTFTYV 442
Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
+V+ + + + HG +++C D N FV T LVDMYAKC I A +F M +
Sbjct: 443 SVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSE- 501
Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
++ W MI GY +G+G A+E F +M+ ++ N TF S+++AC+ + G +
Sbjct: 502 RHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKC 561
Query: 258 HGCILSS-GFEANVYVQSALIDMYAKCGDLDSA 289
+ + E ++ A++D+ + G L+ A
Sbjct: 562 FYMMKENYSIELSMDHYGAMVDLLGRAGRLNEA 594
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 547 bits (1410), Expect = e-154, Method: Compositional matrix adjust.
Identities = 301/799 (37%), Positives = 448/799 (56%), Gaps = 41/799 (5%)
Query: 50 GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF----------NETPFK--- 96
G++ E LFE+M RD WN M+ AY G EA L NE +
Sbjct: 194 GKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLA 253
Query: 97 -------------------NFFTWSSLIY---GYSNY---GLDIEAFELFWQMQLEGYRP 131
+ + S +I+ G S Y G + F M
Sbjct: 254 RISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVEC 313
Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
Q T +L L G+Q H A+K DL V L++MY K + A +F
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373
Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV-SA 250
+ ++ ++W ++I G +QNG +A+ F + G++ +Q+T S+L A +++
Sbjct: 374 DNMSE-RDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEG 432
Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
QVH + ++ +V +ALID Y++ + A L E D V+WN+M+ G
Sbjct: 433 LSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFD-LVAWNAMMAG 491
Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
+ + + L LF MH + + DDFT +V +N K VH+ +K+G++
Sbjct: 492 YTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLD 551
Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRI 430
+V++ ++DMY K G++ A F+ + D ++WT++I+GC +G E A FS MR+
Sbjct: 552 LWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRL 611
Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIND 490
G+ PD ++++ A + LT LE G+Q+HA LK + V SLV +YAKCG I+D
Sbjct: 612 MGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDD 671
Query: 491 ANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSH 550
A +F + ++ W A+++G AQ+G+GKE LQ + QM + G KPD +TF+G+L ACSH
Sbjct: 672 AYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSH 731
Query: 551 AGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
+GL A + SM YGIKP +HY+C+ D LGR+G + +A+ L++ M E A++++
Sbjct: 732 SGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYR 791
Query: 611 ALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRG 670
LL+ACRV GD E G+R A L ELEP+++ YV LSNMY+ A KW++ R +MK
Sbjct: 792 TLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHK 851
Query: 671 IRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVE 730
++K+PG SW+E +++HIF+ +DR + IY K+ +++ IK+ GYVP+ +F L +VE
Sbjct: 852 VKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVE 911
Query: 731 EEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILR 790
EE KE L YHSEKLAVAFGLL+ P PIR+ KNLRVCGDCH AMKYI+ VY R I+LR
Sbjct: 912 EEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLR 971
Query: 791 DSNRFHHFKAGNCSCGDYW 809
D+NRFH FK G CSCGDYW
Sbjct: 972 DANRFHRFKDGICSCGDYW 990
Score = 189 bits (480), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 154/594 (25%), Positives = 264/594 (44%), Gaps = 55/594 (9%)
Query: 59 FEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI--- 115
FE+ +R F N +I+ Y+ G L A+++F++ P ++ +W+S++ Y+ +
Sbjct: 68 FEENPER--FLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVEN 125
Query: 116 --EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG 173
+AF LF ++ + S+ TL +L+LC G + E FHGYA K D + FV
Sbjct: 126 IQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGA 185
Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
LV++Y K + E + LF+ P ++ V W M+ Y + G+ +AI+ G+
Sbjct: 186 LVNIYLKFGKVKEGKVLFEEMP-YRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNP 244
Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
N+ T L A +S D A + +A D S
Sbjct: 245 NEIT----LRLLARISGDDSDA-------------------GQVKSFANGNDASSV---- 277
Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
SEI + N + + G + L F M D++ D T+ +L L
Sbjct: 278 --SEI---IFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLA 332
Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
+ VH + +K G + V+N+LI+MY K A VF+ M ++D+ISW S+I G A
Sbjct: 333 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA 392
Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV-LEFGQQVHAVFLKSGGCSSL 472
+G EA+ F + G+ PD ++S+L A + L L +QVH +K S
Sbjct: 393 QNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDS 452
Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
V +L+ Y++ C+ +A +F+ H D++ W A++ G Q+ G + L+ + M +
Sbjct: 453 FVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQ 511
Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDH----YACMIDLLGRSG 588
G + D T + C + Y IK G D + ++D+ + G
Sbjct: 512 GERSDDFTLATVFKTCGFLFAINQGKQV-----HAYAIKSGYDLDLWVSSGILDMYVKCG 566
Query: 589 KLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMP 642
+ A+ D + PD W ++S C +G+ ERA + ++ M +P
Sbjct: 567 DMSAAQFAFDS-IPVPDDVAWTTMISGCIENGE---EERAFHVFSQMRLMGVLP 616
Score = 186 bits (471), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 123/370 (33%), Positives = 196/370 (52%), Gaps = 17/370 (4%)
Query: 13 LRCRSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNT 72
LRC K P +YT + + +K AS L L S S ++ +SD F
Sbjct: 408 LRCGLK---PDQYT--MTSVLKAASSLPEGL---SLSKQVHVHAIKINNVSD--SFVSTA 457
Query: 73 MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
+I AY+ + ++EA+ LF F + W++++ GY+ + +LF M +G R
Sbjct: 458 LIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSD 516
Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
+TL V + C + +G+Q H YAIK+ +DL+ +V +G++DMY KC + A++ F
Sbjct: 517 DFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFD 576
Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
P + VAWTTMI+G +NG +A F MR+ GV ++FT ++ A + ++A +
Sbjct: 577 SIP-VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALE 635
Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
G Q+H L + +V ++L+DMYAKCG +D A L + E+ N +WN+M+VG A
Sbjct: 636 QGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLA 695
Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLI----VKTGF 367
+ G KE L LFK+M + IK D T+ VL+ C S + K + S+ +K
Sbjct: 696 QHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEI 755
Query: 368 EGYKFVNNAL 377
E Y + +AL
Sbjct: 756 EHYSCLADAL 765
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 5/196 (2%)
Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
DL K H+ I+ +F+ N LI MY+K G+L A VF+ M D+D++SW S++
Sbjct: 54 DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILA 113
Query: 411 GCAYHG-----SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
A + ++A F +R + + +S +L C + + H K
Sbjct: 114 AYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACK 173
Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
G V +LV +Y K G + + +F+ M RDV+ W ++ + G +EA+
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 526 YDQMLARGTKPDYITF 541
+ G P+ IT
Sbjct: 234 SSAFHSSGLNPNEITL 249
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 11/203 (5%)
Query: 247 AVSARDF--GAQVHGCILSSGFEANV--YVQSALIDMYAKCGDLDSARRLLEYSEIDNEV 302
A+++ D G H IL+ FE N ++ + LI MY+KCG L ARR+ + + V
Sbjct: 49 AITSSDLMLGKCTHARILT--FEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLV 106
Query: 303 SWNSMIVGFARQG-----FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
SWNS++ +A+ ++A LF+ + + T +L + + ++S
Sbjct: 107 SWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASES 166
Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
H K G +G +FV AL+++Y K G + ++F M +DV+ W ++ G
Sbjct: 167 FHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGF 226
Query: 418 YEEALKYFSDMRISGICPDHVVV 440
EEA+ S SG+ P+ + +
Sbjct: 227 KEEAIDLSSAFHSSGLNPNEITL 249
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 542 bits (1397), Expect = e-153, Method: Compositional matrix adjust.
Identities = 301/787 (38%), Positives = 439/787 (55%), Gaps = 51/787 (6%)
Query: 73 MIAAYANSGRLREAKKLFNETPFKN--FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
+I+ Y + G L A L P + + W+SLI Y + G + LF M +
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
P YT V + C ++ GE H ++ T F N FV LV MY++C+ + +A +
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE-GVESNQFTFPSILTACAAVS 249
F + V+W ++I Y++ G A+E F M E G + T ++L CA++
Sbjct: 185 FDEM-SVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLG 243
Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
G Q+H ++S N++V + L+DMYAKCG +D A + + + VSWN+M+
Sbjct: 244 THSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVA 303
Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYP----------------------------- 340
G+++ G ++A+ LF+KM IK+D T+
Sbjct: 304 GYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKP 363
Query: 341 ------SVLNCFASNIDLNNAKSVHSLIVK-------TGFEGYKFVNNALIDMYAKQGNL 387
SVL+ AS L + K +H +K G V N LIDMYAK +
Sbjct: 364 NEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKV 423
Query: 388 DCAFMVFNLM--QDKDVISWTSLITGCAYHGSYEEALKYFSDM--RISGICPDHVVVSSI 443
D A +F+ + +++DV++WT +I G + HG +AL+ S+M P+ +S
Sbjct: 424 DTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCA 483
Query: 444 LSACAELTVLEFGQQVHAVFLKSG-GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
L ACA L L G+Q+HA L++ L V N L+ +YAKCG I+DA VFD+M ++
Sbjct: 484 LVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKN 543
Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
+TWT+L+ G +G G+EAL +D+M G K D +T + +L+ACSH+G+ + YF
Sbjct: 544 EVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFN 603
Query: 563 SMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDL 622
M V+G+ PGP+HYAC++DLLGR+G+L A L+++M EP VW A LS CR+HG +
Sbjct: 604 RMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKV 663
Query: 623 ELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVET 682
ELGE AA + EL + Y LSN+Y+ AG+W+D R+R LM+ +G++K PGCSWVE
Sbjct: 664 ELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEG 723
Query: 683 NSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHS 742
F D+ HP +IY + + M IK+ GYVP+ FALH+V++E K+ L HS
Sbjct: 724 IKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHS 783
Query: 743 EKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGN 802
EKLA+A+G+LT PQGA IRI KNLRVCGDCHTA Y+S + IILRDS+RFHHFK G+
Sbjct: 784 EKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGS 843
Query: 803 CSCGDYW 809
CSC YW
Sbjct: 844 CSCKGYW 850
Score = 217 bits (552), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 148/427 (34%), Positives = 220/427 (51%), Gaps = 32/427 (7%)
Query: 43 LVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF---NETPFK-N 97
LVD ++ G +DEA +F MS +D +WN M+A Y+ GR +A +LF E K +
Sbjct: 270 LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 329
Query: 98 FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
TWS+ I GY+ GL EA + QM G +P++ TL +VL C+ G L G++ H
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 389
Query: 158 YAIKTCFDLNA-------FVVTGLVDMYAKCKCIFEAEYLF-KMFPDGKNHVAWTTMITG 209
YAIK DL V+ L+DMYAKCK + A +F + P ++ V WT MI G
Sbjct: 390 YAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGG 449
Query: 210 YSQNGYGFKAIECFRDMRVEGVES--NQFTFPSILTACAAVSARDFGAQVHGCILSSGFE 267
YSQ+G KA+E +M E ++ N FT L ACA+++A G Q+H L +
Sbjct: 450 YSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQN 509
Query: 268 A-NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK 326
A ++V + LIDMYAKCG + AR + + NEV+W S++ G+ G+ +EAL +F +
Sbjct: 510 AVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDE 569
Query: 327 MHARDIKIDDFTYPSVL-NCFASN-ID-----LNNAKSVHSLIVKTGFEGYKFVNNALID 379
M K+D T VL C S ID N K+V V G E Y L+D
Sbjct: 570 MRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFG--VSPGPEHYA----CLVD 623
Query: 380 MYAKQGNLDCAFMVFNLM-QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
+ + G L+ A + M + + W + ++ C HG E L ++ +I+ + +H
Sbjct: 624 LLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVE--LGEYAAEKITELASNHD 681
Query: 439 VVSSILS 445
++LS
Sbjct: 682 GSYTLLS 688
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 157/504 (31%), Positives = 243/504 (48%), Gaps = 57/504 (11%)
Query: 68 FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
F N ++A Y+ L +A+K+F+E + +W+S+I Y+ G A E+F +M E
Sbjct: 163 FVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNE 222
Query: 128 -GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
G RP TL NVL C+ G G+Q H +A+ + N FV LVDMYAKC + E
Sbjct: 223 FGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDE 282
Query: 187 AEYLF----------------------------KMFPDGKNH------VAWTTMITGYSQ 212
A +F ++F + V W+ I+GY+Q
Sbjct: 283 ANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQ 342
Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC--------ILSS 264
G G++A+ R M G++ N+ T S+L+ CA+V A G ++H C + +
Sbjct: 343 RGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH-CYAIKYPIDLRKN 401
Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLE--YSEIDNEVSWNSMIVGFARQGFHKEALS 322
G V + LIDMYAKC +D+AR + + + + V+W MI G+++ G +AL
Sbjct: 402 GHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALE 461
Query: 323 LFKKMHARD--IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK-FVNNALID 379
L +M D + + FT L AS L K +H+ ++ FV+N LID
Sbjct: 462 LLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLID 521
Query: 380 MYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVV 439
MYAK G++ A +VF+ M K+ ++WTSL+TG HG EEAL F +MR G D V
Sbjct: 522 MYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVT 581
Query: 440 VSSILSACAELTV----LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
+ +L AC+ + +E+ ++ VF S G + LV + + G +N A R+
Sbjct: 582 LLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYAC---LVDLLGRAGRLNAALRLI 638
Query: 496 DSMHTR-DVITWTALIMGCAQNGK 518
+ M + W A + C +GK
Sbjct: 639 EEMPMEPPPVVWVAFLSCCRIHGK 662
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 541 bits (1393), Expect = e-152, Method: Compositional matrix adjust.
Identities = 280/771 (36%), Positives = 441/771 (57%), Gaps = 8/771 (1%)
Query: 45 DFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSL 104
D G++ A +++++M ++ + NTMI+ + +G + A+ LF+ P + TW+ L
Sbjct: 57 DLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTIL 116
Query: 105 IYGYSNYGLDIEAFELFWQM--QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT 162
+ Y+ EAF+LF QM P T +L C+ Q H +A+K
Sbjct: 117 MGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKL 176
Query: 163 CFDLNAFVVTG--LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAI 220
FD N F+ L+ Y + + + A LF+ P+ K+ V + T+ITGY ++G ++I
Sbjct: 177 GFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE-KDSVTFNTLITGYEKDGLYTESI 235
Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
F MR G + + FTF +L A + G Q+H +++GF + V + ++D Y
Sbjct: 236 HLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFY 295
Query: 281 AKCGDLDSARRLL-EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTY 339
+K + R L E E+D VS+N +I +++ ++ +L F++M +F +
Sbjct: 296 SKHDRVLETRMLFDEMPELDF-VSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPF 354
Query: 340 PSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
++L+ A+ L + +H + + V N+L+DMYAK + A ++F +
Sbjct: 355 ATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQ 414
Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
+ +SWT+LI+G G + LK F+ MR S + D +++L A A L G+Q+
Sbjct: 415 RTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQL 474
Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKG 519
HA ++SG ++ + LV +YAKCG I DA +VF+ M R+ ++W ALI A NG G
Sbjct: 475 HAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDG 534
Query: 520 KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYAC 579
+ A+ + +M+ G +PD ++ +G+L ACSH G E YF++M +YGI P HYAC
Sbjct: 535 EAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYAC 594
Query: 580 MIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM- 638
M+DLLGR+G+ EA+ L+D+M EPD +W ++L+ACR+H + L ERAA LF +E +
Sbjct: 595 MLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLR 654
Query: 639 NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPL 698
+A YV +SN+Y+ AG+WE V+K M+ RGI+K P SWVE N ++H+F S D+ HP
Sbjct: 655 DAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPN 714
Query: 699 RTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA 758
+I KI+E+ I+ GY PD + + +V+E+ K L YHSE+LAVAF L++ P+G
Sbjct: 715 GDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGC 774
Query: 759 PIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
PI + KNLR C DCH A+K IS + R I +RD++RFHHF G CSCGDYW
Sbjct: 775 PIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 140/325 (43%), Gaps = 35/325 (10%)
Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
+V I+ +GF+ + + +++ + G + +AR++ + N VS N+MI G + G
Sbjct: 34 RVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTG 93
Query: 316 FHKEALSLFKKMHARDIKI---------------------------------DDFTYPSV 342
A LF M R + D T+ ++
Sbjct: 94 DVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTL 153
Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKF--VNNALIDMYAKQGNLDCAFMVFNLMQDK 400
L + N VH+ VK GF+ F V+N L+ Y + LD A ++F + +K
Sbjct: 154 LPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEK 213
Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
D +++ +LITG G Y E++ F MR SG P S +L A L GQQ+H
Sbjct: 214 DSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLH 273
Query: 461 AVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGK 520
A+ + +G SV N ++ Y+K + + +FD M D +++ +I +Q + +
Sbjct: 274 ALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYE 333
Query: 521 EALQFYDQMLARGTKPDYITFVGLL 545
+L F+ +M G F +L
Sbjct: 334 ASLHFFREMQCMGFDRRNFPFATML 358
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 133/298 (44%), Gaps = 39/298 (13%)
Query: 354 NAKSVHSLIVKTGFEG----YKFV---------------------------NNALIDMYA 382
+ + V + I+KTGF+ F+ N +I +
Sbjct: 31 DTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHV 90
Query: 383 KQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC--PDHVVV 440
K G++ A +F+ M D+ V++WT L+ A + ++EA K F M S C PDHV
Sbjct: 91 KTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTF 150
Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSS--LSVDNSLVLVYAKCGCINDANRVFDSM 498
+++L C + QVHA +K G ++ L+V N L+ Y + ++ A +F+ +
Sbjct: 151 TTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEI 210
Query: 499 HTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENAR 558
+D +T+ LI G ++G E++ + +M G +P TF G+L A GL + A
Sbjct: 211 PEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV--VGLHDFAL 268
Query: 559 -WYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
++ G ++D + +++E + L D+M E D + ++S+
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEM-PELDFVSYNVVISS 325
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 531 bits (1369), Expect = e-150, Method: Compositional matrix adjust.
Identities = 285/737 (38%), Positives = 424/737 (57%), Gaps = 8/737 (1%)
Query: 77 YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
Y N G L+EA ++F+E + W+ L+ + G + LF +M G YT
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 137 DNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD 196
V + S + GEQ HG+ +K+ F V LV Y K + + A +F +
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE 258
Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
++ ++W ++I GY NG K + F M V G+E + T S+ CA G
Sbjct: 259 -RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRA 317
Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
VH + + F + L+DMY+KCGDLDSA+ + + VS+ SMI G+AR+G
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377
Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
EA+ LF++M I D +T +VLNC A L+ K VH I + FV+NA
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNA 437
Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS----DMRISG 432
L+DMYAK G++ A +VF+ M+ KD+ISW ++I G + + EAL F+ + R S
Sbjct: 438 LMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFS- 496
Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
PD V+ +L ACA L+ + G+++H +++G S V NSLV +YAKCG + A+
Sbjct: 497 --PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAH 554
Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
+FD + ++D+++WT +I G +G GKEA+ ++QM G + D I+FV LL+ACSH+G
Sbjct: 555 MLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSG 614
Query: 553 LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
L + +F M I+P +HYAC++D+L R+G LI+A ++ M PDAT+W AL
Sbjct: 615 LVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGAL 674
Query: 613 LSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIR 672
L CR+H D++L E+ A +FELEP N YV ++N+Y+ A KWE R+RK + RG+R
Sbjct: 675 LCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLR 734
Query: 673 KEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEE 732
K PGCSW+E +V+IF++ D +P +I + + ++ + E GY P +AL + EE
Sbjct: 735 KNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEM 794
Query: 733 GKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDS 792
KE L HSEKLA+A G+++ G IR+ KNLRVCGDCH K++S + R I+LRDS
Sbjct: 795 EKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDS 854
Query: 793 NRFHHFKAGNCSCGDYW 809
NRFH FK G+CSC +W
Sbjct: 855 NRFHQFKDGHCSCRGFW 871
Score = 233 bits (593), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 137/447 (30%), Positives = 239/447 (53%), Gaps = 6/447 (1%)
Query: 71 NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
N+++A Y + R+ A+K+F+E ++ +W+S+I GY + GL + +F QM + G
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
T+ +V C+ L+ G H +K CF L+DMY+KC + A+ +
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 353
Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
F+ D ++ V++T+MI GY++ G +A++ F +M EG+ + +T ++L CA
Sbjct: 354 FREMSD-RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL 412
Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
D G +VH I + +++V +AL+DMYAKCG + A + + + +SWN++I G
Sbjct: 413 LDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGG 472
Query: 311 FARQGFHKEALSLFK-KMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
+++ + EALSLF + + D+ T VL AS + + +H I++ G+
Sbjct: 473 YSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS 532
Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
+ V N+L+DMYAK G L A M+F+ + KD++SWT +I G HG +EA+ F+ MR
Sbjct: 533 DRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMR 592
Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLVLVYAKCGC 487
+GI D + S+L AC+ +++ G + + +V++ +V + A+ G
Sbjct: 593 QAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP-TVEHYACIVDMLARTGD 651
Query: 488 INDANRVFDSMHT-RDVITWTALIMGC 513
+ A R ++M D W AL+ GC
Sbjct: 652 LIKAYRFIENMPIPPDATIWGALLCGC 678
Score = 221 bits (563), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 150/493 (30%), Positives = 256/493 (51%), Gaps = 16/493 (3%)
Query: 135 TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF 194
TL +VL+LC+ L+ G++ + F +++ + + L MY C + EA +F
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 195 PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFG 254
K + W ++ +++G +I F+ M GVE + +TF + + +++ + G
Sbjct: 156 KIEK-ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGG 214
Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
Q+HG IL SGF V ++L+ Y K +DSAR++ + + +SWNS+I G+
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274
Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
G ++ LS+F +M I+ID T SV A + ++ ++VHS+ VK F
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 334
Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
N L+DMY+K G+LD A VF M D+ V+S+TS+I G A G EA+K F +M GI
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
PD V+++L+ CA +L+ G++VH ++ + V N+L+ +YAKCG + +A V
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454
Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML-ARGTKPDYITFVGLLFACSHAGL 553
F M +D+I+W +I G ++N EAL ++ +L + PD T +L AC+
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 514
Query: 554 AENARWYFESMDKVYG--IKPG---PDHYA-CMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
+ R +++G ++ G H A ++D+ + G L+ A L D + D
Sbjct: 515 FDKGR-------EIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDD-IASKDLV 566
Query: 608 VWKALLSACRVHG 620
W +++ +HG
Sbjct: 567 SWTVMIAGYGMHG 579
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/362 (33%), Positives = 192/362 (53%), Gaps = 32/362 (8%)
Query: 71 NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
NT++ Y+ G L AK +F E ++ +++S+I GY+ GL EA +LF +M+ EG
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
P YT+ VL C+ LL G++ H + + + FV L+DMYAKC + EAE +
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454
Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACAAVS 249
F K+ ++W T+I GYS+N Y +A+ F + E ++ T +L ACA++S
Sbjct: 455 FSEMR-VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLS 513
Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
A D G ++HG I+ +G+ ++ +V ++L+DMYAKCG L A L + + VSW MI
Sbjct: 514 AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIA 573
Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
G+ GF KEA++LF +M I+ D+ ++ S+L + HS +V EG
Sbjct: 574 GYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACS-----------HSGLVD---EG 619
Query: 370 YKFVN---------------NALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCA 413
++F N ++DM A+ G+L A+ + N+ D W +L+ GC
Sbjct: 620 WRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCR 679
Query: 414 YH 415
H
Sbjct: 680 IH 681
Score = 133 bits (335), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 138/270 (51%), Gaps = 16/270 (5%)
Query: 52 IDEAGQLFEKMSDRDG----FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYG 107
+DE ++ E + + D F N ++ YA G ++EA+ +F+E K+ +W+++I G
Sbjct: 413 LDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGG 472
Query: 108 YSNYGLDIEAFELF-WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDL 166
YS EA LF ++ + + P + T+ VL C+ +G + HGY ++ +
Sbjct: 473 YSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS 532
Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
+ V LVDMYAKC + A LF K+ V+WT MI GY +G+G +AI F M
Sbjct: 533 DRHVANSLVDMYAKCGALLLAHMLFDDIA-SKDLVSWTVMIAGYGMHGFGKEAIALFNQM 591
Query: 227 RVEGVESNQFTFPSILTACAAVSARD-----FGAQVHGCILSSGFEANVYVQSALIDMYA 281
R G+E+++ +F S+L AC+ D F H C + E V + ++DM A
Sbjct: 592 RQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI----EPTVEHYACIVDMLA 647
Query: 282 KCGDLDSARRLLEYSEIDNEVS-WNSMIVG 310
+ GDL A R +E I + + W +++ G
Sbjct: 648 RTGDLIKAYRFIENMPIPPDATIWGALLCG 677
Score = 113 bits (282), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 159/382 (41%), Gaps = 54/382 (14%)
Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
ID T SVL A + L + K V + I GF + + L MY G+L A V
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 394 FNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVL 453
F+ ++ + + W L+ A G + ++ F M SG+ D S + + + L +
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 454 EFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGC 513
G+Q+H LKSG SV NSLV Y K ++ A +VFD M RDVI+W ++I G
Sbjct: 212 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 514 AQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC------------------------- 548
NG ++ L + QML G + D T V + C
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 331
Query: 549 ----------SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLD 598
S G ++A+ F M + Y MI R G EA L +
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVS-----YTSMIAGYAREGLAGEAVKLFE 386
Query: 599 QMVGE---PDATVWKALLSACRVHGDLELGERA-----ANNL-FELEPMNAMPYVQLSNM 649
+M E PD A+L+ C + L+ G+R N+L F++ NA L +M
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNA-----LMDM 441
Query: 650 YSTAGKWEDAARVRKLMKSRGI 671
Y+ G ++A V M+ + I
Sbjct: 442 YAKCGSMQEAELVFSEMRVKDI 463
Score = 41.2 bits (95), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 64/170 (37%), Gaps = 33/170 (19%)
Query: 42 ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
+LVD ++ G + A LF+ ++ +D +W MIA Y G +EA LFN
Sbjct: 539 SLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFN--------- 589
Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
QM+ G + + ++L CS GL+ G +F
Sbjct: 590 ----------------------QMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 627
Query: 161 KTC-FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
C + +VDM A+ + +A + P + W ++ G
Sbjct: 628 HECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCG 677
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 530 bits (1366), Expect = e-149, Method: Compositional matrix adjust.
Identities = 303/786 (38%), Positives = 426/786 (54%), Gaps = 110/786 (13%)
Query: 131 PSQYTLDNVLRLCSLKGLLQR----------GEQFHGYAIKTCFDLNAFVVTGLVDMYAK 180
P +L +L LC+ LLQ+ + H IK+ + +++ L+++Y+K
Sbjct: 4 PVPLSLSTLLELCT--NLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSK 61
Query: 181 CKCIFEAEYLFKMFP------------------------------DGKNHVAWTTMITGY 210
A LF P ++ V+WTTMI GY
Sbjct: 62 TGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGY 121
Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV 270
G KAI DM EG+E QFT ++L + AA + G +VH I+ G NV
Sbjct: 122 KNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNV 181
Query: 271 YVQSALIDMYAKCGD-------------------------------LDSARRLLEYSEID 299
V ++L++MYAKCGD +D A E
Sbjct: 182 SVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAER 241
Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARD--IKIDDFTYPSVLNCFASNIDLNNAKS 357
+ V+WNSMI GF ++G+ AL +F KM RD + D FT SVL+ A+ L K
Sbjct: 242 DIVTWNSMISGFNQRGYDLRALDIFSKM-LRDSLLSPDRFTLASVLSACANLEKLCIGKQ 300
Query: 358 VHSLIVKTGFEGYKFVNNALIDMYA---------------------------------KQ 384
+HS IV TGF+ V NALI MY+ K
Sbjct: 301 IHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKL 360
Query: 385 GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
G+++ A +F ++D+DV++WT++I G HGSY EA+ F M G P+ ++++L
Sbjct: 361 GDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAML 420
Query: 445 SACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH-TRDV 503
S + L L G+Q+H +KSG S+SV N+L+ +YAK G I A+R FD + RD
Sbjct: 421 SVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDT 480
Query: 504 ITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFES 563
++WT++I+ AQ+G +EAL+ ++ ML G +PD+IT+VG+ AC+HAGL R YF+
Sbjct: 481 VSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDM 540
Query: 564 MDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
M V I P HYACM+DL GR+G L EA+ +++M EPD W +LLSACRVH +++
Sbjct: 541 MKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNID 600
Query: 624 LGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETN 683
LG+ AA L LEP N+ Y L+N+YS GKWE+AA++RK MK ++KE G SW+E
Sbjct: 601 LGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVK 660
Query: 684 SQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSE 743
+VH+F ED HP + +IY + +I IK+ GYVPD LH++EEE KE L +HSE
Sbjct: 661 HKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSE 720
Query: 744 KLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNC 803
KLA+AFGL++ P +RI KNLRVC DCHTA+K+IS + R II+RD+ RFHHFK G C
Sbjct: 721 KLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFC 780
Query: 804 SCGDYW 809
SC DYW
Sbjct: 781 SCRDYW 786
Score = 224 bits (570), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 150/548 (27%), Positives = 258/548 (47%), Gaps = 98/548 (17%)
Query: 33 VKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNE 92
++ A N L +S G++D + F+++ RD +W TMI Y N G+ +A ++ +
Sbjct: 77 LRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGD 136
Query: 93 TPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG 152
M EG P+Q+TL NVL + ++ G
Sbjct: 137 -------------------------------MVKEGIEPTQFTLTNVLASVAATRCMETG 165
Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP----------------- 195
++ H + +K N V L++MYAKC A+++F
Sbjct: 166 KKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQV 225
Query: 196 -------------DGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSI 241
++ V W +MI+G++Q GY +A++ F M R + ++FT S+
Sbjct: 226 GQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASV 285
Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE------- 294
L+ACA + G Q+H I+++GF+ + V +ALI MY++CG +++ARRL+E
Sbjct: 286 LSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDL 345
Query: 295 -----------YSEIDNE---------------VSWNSMIVGFARQGFHKEALSLFKKMH 328
Y ++ + V+W +MIVG+ + G + EA++LF+ M
Sbjct: 346 KIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMV 405
Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD 388
+ + +T ++L+ +S L++ K +H VK+G V+NALI MYAK GN+
Sbjct: 406 GGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNIT 465
Query: 389 CAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSAC 447
A F+L++ ++D +SWTS+I A HG EEAL+ F M + G+ PDH+ + SAC
Sbjct: 466 SASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSAC 525
Query: 448 AELTVLEFGQQVHAVFLKSGG-CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVIT 505
++ G+Q + +LS +V ++ + G + +A + M DV+T
Sbjct: 526 THAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVT 585
Query: 506 WTALIMGC 513
W +L+ C
Sbjct: 586 WGSLLSAC 593
Score = 156 bits (394), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 200/455 (43%), Gaps = 92/455 (20%)
Query: 8 ILNFSLRCRSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDG 67
+LN +C ++ + V V+ S N + G++D A FE+M++RD
Sbjct: 187 LLNMYAKCGDPMMAKFVFDRMV---VRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 68 FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
TWN+MI+ G++ G D+ A ++F +M +
Sbjct: 244 VTWNSMIS-------------------------------GFNQRGYDLRALDIFSKMLRD 272
Query: 128 G-YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
P ++TL +VL C+ L G+Q H + + T FD++ V+ L+ MY++C +
Sbjct: 273 SLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVET 332
Query: 187 AEYL-------------FKMFPDG-------------------KNHVAWTTMITGYSQNG 214
A L F DG ++ VAWT MI GY Q+G
Sbjct: 333 ARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHG 392
Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQS 274
+AI FR M G N +T ++L+ +++++ G Q+HG + SG +V V +
Sbjct: 393 SYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSN 452
Query: 275 ALIDMYAKCGDLDSARRLLEYSEIDNE-VSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
ALI MYAK G++ SA R + + + VSW SMI+ A+ G +EAL LF+ M ++
Sbjct: 453 ALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLR 512
Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA------------LIDMY 381
D TY V + H+ +V G + + + + ++D++
Sbjct: 513 PDHITYVGVFSA-----------CTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLF 561
Query: 382 AKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYH 415
+ G L A M + DV++W SL++ C H
Sbjct: 562 GRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVH 596
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 522 bits (1345), Expect = e-147, Method: Compositional matrix adjust.
Identities = 276/746 (36%), Positives = 435/746 (58%), Gaps = 5/746 (0%)
Query: 67 GFTWNTMIAAYANSGRLREAKKLFNETPFK-NFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
GF N +++ YA + L A++LF+ K + W+S++ YS G +E ELF +M
Sbjct: 217 GFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMH 276
Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT-CFDLNAFVVTGLVDMYAKCKCI 184
+ G P+ YT+ + L C + G++ H +K+ +V L+ MY +C +
Sbjct: 277 MTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKM 336
Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
+AE + + + + V W ++I GY QN +A+E F DM G +S++ + SI+ A
Sbjct: 337 PQAERILRQM-NNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
+S G ++H ++ G+++N+ V + LIDMY+KC R + +SW
Sbjct: 396 SGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISW 455
Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
++I G+A+ H EAL LF+ + + ++ID+ S+L + + K +H I++
Sbjct: 456 TTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILR 515
Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
G + N L+D+Y K N+ A VF ++ KDV+SWTS+I+ A +G+ EA++
Sbjct: 516 KGLLD-TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVEL 574
Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
F M +G+ D V + ILSA A L+ L G+++H L+ G C S+ ++V +YA
Sbjct: 575 FRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYAC 634
Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
CG + A VFD + + ++ +T++I +G GK A++ +D+M PD+I+F+ L
Sbjct: 635 CGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLAL 694
Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
L+ACSHAGL + R + + M+ Y ++P P+HY C++D+LGR+ ++EA + M EP
Sbjct: 695 LYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEP 754
Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
A VW ALL+ACR H + E+GE AA L ELEP N V +SN+++ G+W D +VR
Sbjct: 755 TAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRA 814
Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIML-LIKEAGYVPDMN 723
MK+ G+ K PGCSW+E + +VH F + D+ HP +IY K+ E+ L +E GYV D
Sbjct: 815 KMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTK 874
Query: 724 FALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVY 783
F LHNV+E K L HSE++A+A+GLL P A +RI KNLRVC DCHT K +S ++
Sbjct: 875 FVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLF 934
Query: 784 LRHIILRDSNRFHHFKAGNCSCGDYW 809
R I++RD+NRFHHF++G CSCGD W
Sbjct: 935 RRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 236 bits (603), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 143/415 (34%), Positives = 225/415 (54%), Gaps = 6/415 (1%)
Query: 139 VLRLCSLKGLLQRGEQFHGYAIKT--CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPD 196
VL LC + + +G Q H KT F+L+ F+ LV MY KC + +AE +F PD
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPD 144
Query: 197 GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQ 256
+ AW TMI Y NG A+ + +MRVEGV +FP++L ACA + G++
Sbjct: 145 -RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSE 203
Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLE-YSEIDNEVSWNSMIVGFARQG 315
+H ++ G+ + ++ +AL+ MYAK DL +ARRL + + E + V WNS++ ++ G
Sbjct: 204 LHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSG 263
Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK-FVN 374
E L LF++MH + +T S L K +H+ ++K+ + +V
Sbjct: 264 KSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVC 323
Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
NALI MY + G + A + M + DV++W SLI G + Y+EAL++FSDM +G
Sbjct: 324 NALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHK 383
Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
D V ++SI++A L+ L G ++HA +K G S+L V N+L+ +Y+KC R
Sbjct: 384 SDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRA 443
Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
F MH +D+I+WT +I G AQN EAL+ + + + + D + +L A S
Sbjct: 444 FLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 146/545 (26%), Positives = 252/545 (46%), Gaps = 19/545 (3%)
Query: 19 IIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYA 78
+ GPA ++ + +++ + ++ G+ A L + + N +IA Y
Sbjct: 277 MTGPAPNSYTIVSALTACDGFS-----YAKLGKEIHASVLKSSTHSSELYVCNALIAMYT 331
Query: 79 NSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDN 138
G++ +A+++ + + TW+SLI GY + EA E F M G++ + ++ +
Sbjct: 332 RCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTS 391
Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
++ L G + H Y IK +D N V L+DMY+KC F D K
Sbjct: 392 IIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD-K 450
Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVH 258
+ ++WTT+I GY+QN +A+E FRD+ + +E ++ SIL A + + + ++H
Sbjct: 451 DLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIH 510
Query: 259 GCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHK 318
IL G V +Q+ L+D+Y KC ++ A R+ E + + VSW SMI A G
Sbjct: 511 CHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNES 569
Query: 319 EALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
EA+ LF++M + D +L+ AS LN + +H +++ GF + A++
Sbjct: 570 EAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVV 629
Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
DMYA G+L A VF+ ++ K ++ +TS+I HG + A++ F MR + PDH+
Sbjct: 630 DMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHI 689
Query: 439 VVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN-SLVLVYAKCGCINDANRVFDS 497
++L AC+ +L+ G+ + LV + + C+ +A
Sbjct: 690 SFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKM 749
Query: 498 MHTRDVI-TWTALIMGCAQNGKGKEALQFYDQML--ARGTKPDYITFVGLLFACSHAGLA 554
M T W AL+ C + + KE + Q L P + V +F A
Sbjct: 750 MKTEPTAEVWCALLAACRSHSE-KEIGEIAAQRLLELEPKNPGNLVLVSNVF-------A 801
Query: 555 ENARW 559
E RW
Sbjct: 802 EQGRW 806
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 521 bits (1342), Expect = e-147, Method: Compositional matrix adjust.
Identities = 271/675 (40%), Positives = 397/675 (58%), Gaps = 34/675 (5%)
Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
N F L+ Y+K I E E F+ PD ++ V W +I GYS +G A++ + M
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPD-RDGVTWNVLIEGYSLSGLVGAAVKAYNTM 129
Query: 227 -RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK--- 282
R + T ++L ++ G Q+HG ++ GFE+ + V S L+ MYA
Sbjct: 130 MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC 189
Query: 283 ----------------------------CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
CG ++ A +L E D+ VSW +MI G A+
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDS-VSWAAMIKGLAQN 248
Query: 315 GFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
G KEA+ F++M + +K+D + + SVL +N K +H+ I++T F+ + +V
Sbjct: 249 GLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVG 308
Query: 375 NALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
+ALIDMY K L A VF+ M+ K+V+SWT+++ G G EEA+K F DM+ SGI
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Query: 435 PDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRV 494
PDH + +SACA ++ LE G Q H + SG ++V NSLV +Y KCG I+D+ R+
Sbjct: 369 PDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRL 428
Query: 495 FDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLA 554
F+ M+ RD ++WTA++ AQ G+ E +Q +D+M+ G KPD +T G++ ACS AGL
Sbjct: 429 FNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLV 488
Query: 555 ENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLS 614
E + YF+ M YGI P HY+CMIDL RSG+L EA ++ M PDA W LLS
Sbjct: 489 EKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
Query: 615 ACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
ACR G+LE+G+ AA +L EL+P + Y LS++Y++ GKW+ A++R+ M+ + ++KE
Sbjct: 549 ACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKE 608
Query: 675 PGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGK 734
PG SW++ ++H F ++D P IY+K++E+ I + GY PD +F H+VEE K
Sbjct: 609 PGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVK 668
Query: 735 EIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNR 794
L YHSE+LA+AFGL+ +P G PIR+ KNLRVC DCH A K+IS+V R I++RD+ R
Sbjct: 669 VKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVR 728
Query: 795 FHHFKAGNCSCGDYW 809
FH FK G CSCGD+W
Sbjct: 729 FHRFKDGTCSCGDFW 743
Score = 264 bits (675), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/495 (30%), Positives = 259/495 (52%), Gaps = 32/495 (6%)
Query: 55 AGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLD 114
A ++F+++ + F+WN ++ AY+ +G + E + F + P ++ TW+ LI GYS GL
Sbjct: 60 ARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLV 119
Query: 115 IEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG 173
A + + M + ++ TL +L+L S G + G+Q HG IK F+ V +
Sbjct: 120 GAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSP 179
Query: 174 LVDMYAKCKCIFEAEYLF---------------------KMFPDG--------KNHVAWT 204
L+ MYA CI +A+ +F M D K+ V+W
Sbjct: 180 LLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWA 239
Query: 205 TMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS 264
MI G +QNG +AIECFR+M+V+G++ +Q+ F S+L AC + A + G Q+H CI+ +
Sbjct: 240 AMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRT 299
Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLF 324
F+ ++YV SALIDMY KC L A+ + + + N VSW +M+VG+ + G +EA+ +F
Sbjct: 300 NFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIF 359
Query: 325 KKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
M I D +T ++ A+ L H + +G Y V+N+L+ +Y K
Sbjct: 360 LDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKC 419
Query: 385 GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
G++D + +FN M +D +SWT++++ A G E ++ F M G+ PD V ++ ++
Sbjct: 420 GDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVI 479
Query: 445 SACAELTVLEFGQQVHAVFLKSGG-CSSLSVDNSLVLVYAKCGCINDANRVFDSM-HTRD 502
SAC+ ++E GQ+ + G S+ + ++ ++++ G + +A R + M D
Sbjct: 480 SACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPD 539
Query: 503 VITWTALIMGCAQNG 517
I WT L+ C G
Sbjct: 540 AIGWTTLLSACRNKG 554
Score = 160 bits (405), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 125/501 (24%), Positives = 229/501 (45%), Gaps = 84/501 (16%)
Query: 242 LTACAAVSARD---FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI 298
+ C + AR+ + +HG I+ + ++ + ++ YA ARR+ +
Sbjct: 10 IKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQ 69
Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARD-------------------------IK 333
N SWN++++ +++ G E S F+K+ RD
Sbjct: 70 PNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM 129
Query: 334 IDDF-------TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
+ DF T ++L +SN ++ K +H ++K GFE Y V + L+ MYA G
Sbjct: 130 MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC 189
Query: 387 LDCAFMVFNLMQD------------------------------KDVISWTSLITGCAYHG 416
+ A VF + D KD +SW ++I G A +G
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNG 249
Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
+EA++ F +M++ G+ D S+L AC L + G+Q+HA +++ + V +
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
+L+ +Y KC C++ A VFD M ++V++WTA+++G Q G+ +EA++ + M G P
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDP 369
Query: 537 DYITFVGLLFACSH-AGLAENARWYFESMDKVYGIKPGPDHYAC----MIDLLGRSGKLI 591
D+ T + AC++ + L E ++++ ++ I G HY ++ L G+ G +
Sbjct: 370 DHYTLGQAISACANVSSLEEGSQFHGKA------ITSGLIHYVTVSNSLVTLYGKCGDID 423
Query: 592 EAKALLDQMVGEPDATVWKALLSA----CRVHGDLELGERAANNLFELEPMNAMPYVQLS 647
++ L ++M DA W A++SA R ++L ++ + L+P + + +
Sbjct: 424 DSTRLFNEM-NVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQH--GLKP-DGVTLTGVI 479
Query: 648 NMYSTAGKWEDAARVRKLMKS 668
+ S AG E R KLM S
Sbjct: 480 SACSRAGLVEKGQRYFKLMTS 500
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 518 bits (1335), Expect = e-146, Method: Compositional matrix adjust.
Identities = 285/769 (37%), Positives = 440/769 (57%), Gaps = 19/769 (2%)
Query: 56 GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF---KNFFTWSSLIYGYSNYG 112
+L E + D +N++I+ Y+ SG +A+ +F ++ +WS+++ Y N G
Sbjct: 86 ARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNG 145
Query: 113 LDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC-FDLNAFVV 171
+++A ++F + G P+ Y V+R CS + G G+ +KT F+ + V
Sbjct: 146 RELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVG 205
Query: 172 TGLVDMYAKCKCIFEAEYLFKMFPDGK--NHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
L+DM+ K + FE Y K+F N V WT MIT Q G+ +AI F DM +
Sbjct: 206 CSLIDMFVKGENSFENAY--KVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLS 263
Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC---GDL 286
G ES++FT S+ +ACA + G Q+H + SG +V + +L+DMYAKC G +
Sbjct: 264 GFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSV 321
Query: 287 DSARRLLEYSEIDNEVSWNSMIVGFARQ-GFHKEALSLFKKMHAR-DIKIDDFTYPSVLN 344
D R++ + E + +SW ++I G+ + EA++LF +M + ++ + FT+ S
Sbjct: 322 DDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFK 381
Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
+ D K V K G V N++I M+ K ++ A F + +K+++S
Sbjct: 382 ACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVS 441
Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
+ + + G + ++E+A K S++ + +S+LS A + + G+Q+H+ +
Sbjct: 442 YNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV 501
Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ 524
K G + V N+L+ +Y+KCG I+ A+RVF+ M R+VI+WT++I G A++G L+
Sbjct: 502 KLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLE 561
Query: 525 FYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLL 584
++QM+ G KP+ +T+V +L ACSH GL +F SM + + IKP +HYACM+DLL
Sbjct: 562 TFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLL 621
Query: 585 GRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYV 644
R+G L +A ++ M + D VW+ L ACRVH + ELG+ AA + EL+P Y+
Sbjct: 622 CRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYI 681
Query: 645 QLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYS 704
QLSN+Y+ AGKWE++ +R+ MK R + KE GCSW+E ++H F D HP IY
Sbjct: 682 QLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYD 741
Query: 705 KIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIG----LAYHSEKLAVAFGLLTLPQGAPI 760
++D ++ IK GYVPD + LH +EEE E L HSEK+AVAFGL++ + P+
Sbjct: 742 ELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPV 801
Query: 761 RIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
R+FKNLRVCGDCH AMKYIS V R I+LRD NRFHHFK G CSC DYW
Sbjct: 802 RVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 208 bits (530), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 148/480 (30%), Positives = 237/480 (49%), Gaps = 41/480 (8%)
Query: 42 ALVDFSNSGE--IDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
+L+D GE + A ++F+KMS+ + TW MI G REA + F
Sbjct: 207 SLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFF--------- 257
Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
LD M L G+ ++TL +V C+ L G+Q H +A
Sbjct: 258 -------------LD---------MVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWA 295
Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNH--VAWTTMITGYSQN-GYG 216
I++ L V LVDMYAKC + K+F ++H ++WT +ITGY +N
Sbjct: 296 IRS--GLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLA 353
Query: 217 FKAIECFRDMRVEG-VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSA 275
+AI F +M +G VE N FTF S AC +S G QV G G +N V ++
Sbjct: 354 TEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANS 413
Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
+I M+ K ++ A+R E N VS+N+ + G R ++A L ++ R++ +
Sbjct: 414 VISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVS 473
Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
FT+ S+L+ A+ + + +HS +VK G + V NALI MY+K G++D A VFN
Sbjct: 474 AFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFN 533
Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
M++++VISWTS+ITG A HG L+ F+ M G+ P+ V +ILSAC+ + ++
Sbjct: 534 FMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSE 593
Query: 456 G-QQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
G + ++++ + +V + + G + DA ++M + DV+ W + C
Sbjct: 594 GWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGAC 653
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 142/505 (28%), Positives = 242/505 (47%), Gaps = 61/505 (12%)
Query: 219 AIECFRDMRVEGVES-NQFTFPSILTACAAVSARDF--GAQVHGCILSSGFEANVYVQSA 275
A+ M +G+ + TF S+L +C + ARDF G VH ++ E + + ++
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSC--IRARDFRLGKLVHARLIEFDIEPDSVLYNS 102
Query: 276 LIDMYAKCGDLDSARRLLEYSE---IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI 332
LI +Y+K GD A + E + VSW++M+ + G +A+ +F + +
Sbjct: 103 LISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL 162
Query: 333 KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG-FEGYKFVNNALIDMYAK-QGNLDCA 390
+D+ Y +V+ +++ + + ++KTG FE V +LIDM+ K + + + A
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENA 222
Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
+ VF+ M + +V++WT +IT C G EA+++F DM +SG D +SS+ SACAEL
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL 282
Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC---GCINDANRVFDSMHTRDVITWT 507
L G+Q+H+ ++SG V+ SLV +YAKC G ++D +VFD M V++WT
Sbjct: 283 ENLSLGKQLHSWAIRSGLVD--DVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWT 340
Query: 508 ALIMGCAQN-GKGKEALQFYDQMLARG-TKPDYITFVGLLFACSH--------------- 550
ALI G +N EA+ + +M+ +G +P++ TF AC +
Sbjct: 341 ALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF 400
Query: 551 -AGLA-------------------ENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKL 590
GLA E+A+ FES+ + + Y +D R+
Sbjct: 401 KRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVS-----YNTFLDGTCRNLNF 455
Query: 591 IEAKALLDQMVGEP---DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ-L 646
+A LL ++ A + +LLS G + GE+ + + +L P L
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 647 SNMYSTAGKWEDAARVRKLMKSRGI 671
+MYS G + A+RV M++R +
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNV 540
Score = 100 bits (248), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 170/378 (44%), Gaps = 31/378 (8%)
Query: 334 IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMV 393
+D T+ S+L D K VH+ +++ E + N+LI +Y+K G+ A V
Sbjct: 60 MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119
Query: 394 FNLMQ---DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
F M+ +DV+SW++++ +G +A+K F + G+ P+ ++++ AC+
Sbjct: 120 FETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNS 179
Query: 451 TVLEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKC-GCINDANRVFDSMHTRDVITWTA 508
+ G+ +K+G S + V SL+ ++ K +A +VFD M +V+TWT
Sbjct: 180 DFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTL 239
Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
+I C Q G +EA++F+ M+ G + D T + AC AE +
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC-----AELENLSLGKQLHSW 294
Query: 569 GIKPG-PDHYAC-MIDLLGR---SGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
I+ G D C ++D+ + G + + + + D+M + W AL++ + +L
Sbjct: 295 AIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRM-EDHSVMSWTALITGYMKNCNLA 353
Query: 624 LGERAANNLF-------ELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPG 676
A NLF +EP + S+ + G D RV K + + ++
Sbjct: 354 T---EAINLFSEMITQGHVEP----NHFTFSSAFKACGNLSD-PRVGKQVLGQAFKRGLA 405
Query: 677 CSWVETNSQVHIFISEDR 694
+ NS + +F+ DR
Sbjct: 406 SNSSVANSVISMFVKSDR 423
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 40/217 (18%)
Query: 36 ASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF 95
+S N + F S +++A + FE +S+++ ++NT + + +A KL +E
Sbjct: 408 SSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE 467
Query: 96 KNF----FTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQR 151
+ FT++SL+ G +N G +++
Sbjct: 468 RELGVSAFTFASLLSGVANV-----------------------------------GSIRK 492
Query: 152 GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYS 211
GEQ H +K N V L+ MY+KC I A +F F + +N ++WT+MITG++
Sbjct: 493 GEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFN-FMENRNVISWTSMITGFA 551
Query: 212 QNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
++G+ + +E F M EGV+ N+ T+ +IL+AC+ V
Sbjct: 552 KHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHV 588
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 518 bits (1335), Expect = e-146, Method: Compositional matrix adjust.
Identities = 295/772 (38%), Positives = 419/772 (54%), Gaps = 102/772 (13%)
Query: 140 LRLCS--LKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF--P 195
LRLC + LQ HG I F A ++ L+D+Y K + A LF P
Sbjct: 19 LRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEP 78
Query: 196 DG------------------------------KNHVAWTTMITGYSQNGYGFKAIECFRD 225
D ++ V + MITG+S N G+ AI F
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFG-AQVHGCILSSGFEANVYVQSALIDMYAKCG 284
M+ EG + + FTF S+L A V+ + Q H L SG V +AL+ +Y+KC
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198
Query: 285 D----LDSARRLLEYSEIDNEVSW--------------------------------NSMI 308
L SAR++ + +E SW N+MI
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMI 258
Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
G+ +GF++EAL + ++M + I++D+FTYPSV+ A+ L K VH+ +++
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF 318
Query: 369 GYKFVN------------------------------NALIDMYAKQGNLDCAFMVFNLMQ 398
+ F N NAL+ Y G++ A ++F M+
Sbjct: 319 SFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK 378
Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ 458
+K+++SW +I+G A +G EE LK FS M+ G P S + +CA L GQQ
Sbjct: 379 EKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQ 438
Query: 459 VHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGK 518
HA LK G SSLS N+L+ +YAKCG + +A +VF +M D ++W ALI Q+G
Sbjct: 439 YHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGH 498
Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA 578
G EA+ Y++ML +G +PD IT + +L ACSHAGL + R YF+SM+ VY I PG DHYA
Sbjct: 499 GAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYA 558
Query: 579 CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM 638
+IDLL RSGK +A+++++ + +P A +W+ALLS CRVHG++ELG AA+ LF L P
Sbjct: 559 RLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPE 618
Query: 639 NAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPL 698
+ Y+ LSNM++ G+WE+ ARVRKLM+ RG++KE CSW+E +QVH F+ +D HP
Sbjct: 619 HDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPE 678
Query: 699 RTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEG-KEIGLAYHSEKLAVAFGLLTLPQG 757
+Y + ++ ++ GYVPD +F LH+VE +G KE L HSEK+AVAFGL+ LP G
Sbjct: 679 AEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPG 738
Query: 758 APIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
IRIFKNLR CGDCH +++S V R IILRD RFHHF+ G CSCG++W
Sbjct: 739 TTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 212 bits (539), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 166/610 (27%), Positives = 276/610 (45%), Gaps = 89/610 (14%)
Query: 9 LNFSLRCRSKIIGPARYTHNVGNSV----KP-ASDLNRALVDFSNSGEIDEAGQLFEKMS 63
L L R + AR H GN + +P A LNR + + S E++ A QLF+++S
Sbjct: 19 LRLCLPLRRTSLQLARAVH--GNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEIS 76
Query: 64 DRDGFTWNTMIAAYANSGRLREAKKLFNETP--FKNFFTWSSLIYGYSNYGLDIEAFELF 121
+ D TM++ Y SG + A+ +F + P ++ ++++I G+S+ A LF
Sbjct: 77 EPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLF 136
Query: 122 WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRG-EQFHGYAIKTCFDLNAFVVTGLVDMYAK 180
+M+ EG++P +T +VL +L ++ QFH A+K+ V LV +Y+K
Sbjct: 137 CKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSK 196
Query: 181 C----KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGY--------------------- 215
C + A +F + K+ +WTTM+TGY +NGY
Sbjct: 197 CASSPSLLHSARKVFDEILE-KDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYN 255
Query: 216 ---------GF--KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS 264
GF +A+E R M G+E ++FT+PS++ ACA G QVH +L
Sbjct: 256 AMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR 315
Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNS------------------ 306
+ + + ++L+ +Y KCG D AR + E + VSWN+
Sbjct: 316 E-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIF 374
Query: 307 -------------MIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
MI G A GF +E L LF M + D+ + + A
Sbjct: 375 KEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYC 434
Query: 354 NAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCA 413
N + H+ ++K GF+ NALI MYAK G ++ A VF M D +SW +LI
Sbjct: 435 NGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALG 494
Query: 414 YHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQ----VHAVFLKSGGC 469
HG EA+ + +M GI PD + + ++L+AC+ +++ G++ + V+ G
Sbjct: 495 QHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGA 554
Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVI-TWTALIMGCAQNGKGKEALQFYDQ 528
+ L+ + + G +DA V +S+ + W AL+ GC +G + + D+
Sbjct: 555 DHYA---RLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADK 611
Query: 529 MLARGTKPDY 538
+ G P++
Sbjct: 612 LF--GLIPEH 619
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 183/416 (43%), Gaps = 91/416 (21%)
Query: 341 SVLNCFASNI---------DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
++ N +A+N+ L A++VH I+ GF+ + N LID+Y K L+ A
Sbjct: 10 AIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYAR 69
Query: 392 MVFNLMQDKDVISWTSLITG-CAY------HGSYEE------------------------ 420
+F+ + + D I+ T++++G CA G +E+
Sbjct: 70 QLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDG 129
Query: 421 --ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ--QVHAVFLKSGGCSSLSVDN 476
A+ F M+ G PD+ +S+L+ A L + Q Q HA LKSG SV N
Sbjct: 130 YSAINLFCKMKHEGFKPDNFTFASVLAGLA-LVADDEKQCVQFHAAALKSGAGYITSVSN 188
Query: 477 SLVLVYAKCGC----INDANRVFDSMHTRDVITWTALIMGCAQNG--------------- 517
+LV VY+KC ++ A +VFD + +D +WT ++ G +NG
Sbjct: 189 ALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDN 248
Query: 518 ---------------KG--KEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWY 560
+G +EAL+ +M++ G + D T+ ++ AC+ AGL + +
Sbjct: 249 MKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQV 308
Query: 561 FESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
+ + D+ ++ L + GK EA+A+ ++M + D W ALLS G
Sbjct: 309 HAYVLRREDFSFHFDN--SLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYVSSG 365
Query: 621 DLELGERAANNLF-ELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEP 675
+GE A +F E++ N + ++ + + + G E+ ++ MK G EP
Sbjct: 366 --HIGE--AKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGF--EP 415
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 517 bits (1331), Expect = e-145, Method: Compositional matrix adjust.
Identities = 299/759 (39%), Positives = 445/759 (58%), Gaps = 20/759 (2%)
Query: 66 DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
D F + +++A+A SG L A+K+FN+ +N T + L+ G EA +LF M
Sbjct: 242 DLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN 301
Query: 126 -LEGYRPSQYTLDNVLRLCSLKGL-------LQRGEQFHGYAIKT-CFDLNAFVVTGLVD 176
+ P Y V+ L S L++G + HG+ I T D + GLV+
Sbjct: 302 SMIDVSPESY----VILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVN 357
Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
MYAKC I +A +F D K+ V+W +MITG QNG +A+E ++ MR + F
Sbjct: 358 MYAKCGSIADARRVFYFMTD-KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSF 416
Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
T S L++CA++ G Q+HG L G + NV V +AL+ +YA+ G L+ R++
Sbjct: 417 TLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM 476
Query: 297 EIDNEVSWNSMIVGFAR-QGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
++VSWNS+I AR + EA+ F K++ T+ SVL+ +S
Sbjct: 477 PEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELG 536
Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLITGCAY 414
K +H L +K NALI Y K G +D +F+ M ++ D ++W S+I+G +
Sbjct: 537 KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIH 596
Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
+ +AL M +G D + +++LSA A + LE G +VHA +++ S + V
Sbjct: 597 NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVV 656
Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG- 533
++LV +Y+KCG ++ A R F++M R+ +W ++I G A++G+G+EAL+ ++ M G
Sbjct: 657 GSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQ 716
Query: 534 TKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA 593
T PD++TFVG+L ACSHAGL E +FESM YG+ P +H++CM D+LGR+G+L +
Sbjct: 717 TPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKL 776
Query: 594 KALLDQMVGEPDATVWKALLSAC-RVHG-DLELGERAANNLFELEPMNAMPYVQLSNMYS 651
+ +++M +P+ +W+ +L AC R +G ELG++AA LF+LEP NA+ YV L NMY+
Sbjct: 777 EDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYA 836
Query: 652 TAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIML 711
G+WED + RK MK ++KE G SWV VH+F++ D+ HP IY K+ E+
Sbjct: 837 AGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNR 896
Query: 712 LIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA-PIRIFKNLRVCG 770
+++AGYVP FAL+++E+E KE L+YHSEKLAVAF L PIRI KNLRVCG
Sbjct: 897 KMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCG 956
Query: 771 DCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
DCH+A KYIS + R IILRDSNRFHHF+ G CSC D+W
Sbjct: 957 DCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 260 bits (665), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 177/579 (30%), Positives = 287/579 (49%), Gaps = 18/579 (3%)
Query: 57 QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
+L++ D+D + N +I AY +G A+K+F+E P +N +W+ ++ GYS G E
Sbjct: 26 RLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKE 85
Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL--LQRGEQFHGYAIKTCFDLNAFVVTGL 174
A M EG +QY +VLR C G + G Q HG K + ++A V L
Sbjct: 86 ALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVL 145
Query: 175 VDMYAKCKCIFEAEYLFKMFPD--GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
+ MY KCI Y F D KN V+W ++I+ YSQ G A F M+ +G
Sbjct: 146 ISMY--WKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 233 SNQFTFPSILTACAAVSARDFG--AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
++TF S++T +++ D Q+ I SG +++V S L+ +AK G L AR
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYAR 263
Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCF---- 346
++ E N V+ N ++VG RQ + +EA LF M++ I + +Y +L+ F
Sbjct: 264 KVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM-IDVSPESYVILLSSFPEYS 322
Query: 347 -ASNIDLNNAKSVHSLIVKTGFEGYKF-VNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
A + L + VH ++ TG + + N L++MYAK G++ A VF M DKD +S
Sbjct: 323 LAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVS 382
Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
W S+ITG +G + EA++ + MR I P + S LS+CA L + GQQ+H L
Sbjct: 383 WNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESL 442
Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKG-KEAL 523
K G ++SV N+L+ +YA+ G +N+ ++F SM D ++W ++I A++ + EA+
Sbjct: 443 KLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAV 502
Query: 524 QFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDL 583
+ G K + ITF +L A S E + + I +I
Sbjct: 503 VCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGK-QIHGLALKNNIADEATTENALIAC 561
Query: 584 LGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDL 622
G+ G++ + + +M D W +++S +H +L
Sbjct: 562 YGKCGEMDGCEKIFSRMAERRDNVTWNSMISG-YIHNEL 599
Score = 126 bits (316), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 181/376 (48%), Gaps = 18/376 (4%)
Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
H + + + +VY+ + LI+ Y + GD SAR++ + + N VSW ++ G++R G H
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFAS--NIDLNNAKSVHSLIVKTGFEGYKFVNN 375
KEAL + M I + + + SVL ++ + + +H L+ K + V+N
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 376 ALIDMYAK-QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGIC 434
LI MY K G++ A F ++ K+ +SW S+I+ + G A + FS M+ G
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 435 PDHVVVSSILSACAELTV--LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDAN 492
P S+++ LT + +Q+ KSG + L V + LV +AK G ++ A
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYAR 263
Query: 493 RVFDSMHTRDVITWTALIMGCAQNGKGKEALQ-FYDQMLARGTKPDYITFVGLLFACSHA 551
+VF+ M TR+ +T L++G + G+EA + F D P+ ++V LL +
Sbjct: 264 KVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEY 321
Query: 552 GLAENARWYFESMDKVYG--IKPGPDHYAC-----MIDLLGRSGKLIEAKALLDQMVGEP 604
LAE + +V+G I G + ++++ + G + +A+ + M +
Sbjct: 322 SLAEEVG--LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT-DK 378
Query: 605 DATVWKALLSACRVHG 620
D+ W ++++ +G
Sbjct: 379 DSVSWNSMITGLDQNG 394
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 131/295 (44%), Gaps = 36/295 (12%)
Query: 31 NSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDR-DGFTWNTMIAAYANSGRLREAKKL 89
N A+ N + + GE+D ++F +M++R D TWN+MI+ Y +
Sbjct: 547 NIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGY-----------I 595
Query: 90 FNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLL 149
NE L +A +L W M G R + VL + L
Sbjct: 596 HNE--------------------LLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATL 635
Query: 150 QRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
+RG + H +++ C + + V + LVDMY+KC + A F P +N +W +MI+G
Sbjct: 636 ERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPV-RNSYSWNSMISG 694
Query: 210 YSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFE 267
Y+++G G +A++ F M+++G + TF +L+AC+ + G + + S G
Sbjct: 695 YARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLA 754
Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMIVGFARQGFHKEAL 321
+ S + D+ + G+LD +E + N + W +++ R K L
Sbjct: 755 PRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAEL 809
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 123/253 (48%), Gaps = 10/253 (3%)
Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
A+ HS + K + ++ N LI+ Y + G+ A VF+ M ++ +SW +++G +
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL--TVLEFGQQVHAVFLKSGGCSSL 472
+G ++EAL + DM GI + S+L AC E+ + FG+Q+H + K
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139
Query: 473 SVDNSLVLVYAKC-GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLA 531
V N L+ +Y KC G + A F + ++ ++W ++I +Q G + A + + M
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199
Query: 532 RGTKPDYITFVGLL-FACSHAGLAE-NARWYFESMDKVYGIKPGPDHY--ACMIDLLGRS 587
G++P TF L+ ACS L E + R + M + D + + ++ +S
Sbjct: 200 DGSRPTEYTFGSLVTTACS---LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKS 256
Query: 588 GKLIEAKALLDQM 600
G L A+ + +QM
Sbjct: 257 GSLSYARKVFNQM 269
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 118/289 (40%), Gaps = 49/289 (16%)
Query: 64 DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
+ D + ++ Y+ GRL A + FN P +N ++W+S+I GY+ +G EA +LF
Sbjct: 651 ESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFET 710
Query: 124 MQLEGYRPSQY-TLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV--VTGLVDMYAK 180
M+L+G P + T VL CS GLL+ G + H ++ + L + + + D+ +
Sbjct: 711 MKLDGQTPPDHVTFVGVLSACSHAGLLEEGFK-HFESMSDSYGLAPRIEHFSCMADVLGR 769
Query: 181 CKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
+ + E + P N + W T
Sbjct: 770 AGELDKLEDFIEKMPMKPNVLIWRT----------------------------------- 794
Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI-DMYAKCG---DLDSARRLLEYS 296
+L AC + R + E V L+ +MYA G DL AR+ ++ +
Sbjct: 795 VLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDA 854
Query: 297 EIDNEV--SWNSMIVG----FARQGFHKEALSLFKKMHARDIKIDDFTY 339
++ E SW +M G A H +A ++KK+ + K+ D Y
Sbjct: 855 DVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGY 903
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 512 bits (1319), Expect = e-144, Method: Compositional matrix adjust.
Identities = 251/645 (38%), Positives = 385/645 (59%), Gaps = 36/645 (5%)
Query: 201 VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
+AW ++I ++ KA+ F +MR G + FPS+L +C + FG VHG
Sbjct: 71 LAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGF 130
Query: 261 ILSSGFEANVYVQSALIDMYAK-----------------------CGD------------ 285
I+ G + ++Y +AL++MYAK GD
Sbjct: 131 IVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPF 190
Query: 286 -LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
+DS RR+ E + VS+N++I G+A+ G +++AL + ++M D+K D FT SVL
Sbjct: 191 GIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLP 250
Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
F+ +D+ K +H +++ G + ++ ++L+DMYAK ++ + VF+ + +D IS
Sbjct: 251 IFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS 310
Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
W SL+ G +G Y EAL+ F M + + P V SS++ ACA L L G+Q+H L
Sbjct: 311 WNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVL 370
Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ 524
+ G S++ + ++LV +Y+KCG I A ++FD M+ D ++WTA+IMG A +G G EA+
Sbjct: 371 RGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVS 430
Query: 525 FYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLL 584
+++M +G KP+ + FV +L ACSH GL + A YF SM KVYG+ +HYA + DLL
Sbjct: 431 LFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLL 490
Query: 585 GRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYV 644
GR+GKL EA + +M EP +VW LLS+C VH +LEL E+ A +F ++ N YV
Sbjct: 491 GRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYV 550
Query: 645 QLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYS 704
+ NMY++ G+W++ A++R M+ +G+RK+P CSW+E ++ H F+S DR HP I
Sbjct: 551 LMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINE 610
Query: 705 KIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFK 764
+ +M +++ GYV D + LH+V+EE K L HSE+LAVAFG++ G IR+ K
Sbjct: 611 FLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTK 670
Query: 765 NLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
N+R+C DCH A+K+IS + R II+RD++RFHHF GNCSCGDYW
Sbjct: 671 NIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 207/418 (49%), Gaps = 37/418 (8%)
Query: 73 MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
+I+ Y N L EA LF W S+I +++ L +A F +M+ G P
Sbjct: 45 VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPD 104
Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC----------- 181
+VL+ C++ L+ GE HG+ ++ D + + L++MYAK
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGN 164
Query: 182 --------------------KCIF-----EAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
CI +F++ P K+ V++ T+I GY+Q+G
Sbjct: 165 VFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPR-KDVVSYNTIIAGYAQSGMY 223
Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
A+ R+M ++ + FT S+L + G ++HG ++ G +++VY+ S+L
Sbjct: 224 EDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSL 283
Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
+DMYAK ++ + R+ + +SWNS++ G+ + G + EAL LF++M +K
Sbjct: 284 VDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGA 343
Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
+ SV+ A L+ K +H +++ GF F+ +AL+DMY+K GN+ A +F+
Sbjct: 344 VAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDR 403
Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLE 454
M D +SWT++I G A HG EA+ F +M+ G+ P+ V ++L+AC+ + +++
Sbjct: 404 MNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVD 461
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 204/381 (53%), Gaps = 23/381 (6%)
Query: 56 GQLFEKMSDRDGFTWNTMIAAYA--NSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGL 113
G +F++M R + + + A + +++F P K+ +++++I GY+ G+
Sbjct: 163 GNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGM 222
Query: 114 DIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG 173
+A + +M +P +TL +VL + S + +G++ HGY I+ D + ++ +
Sbjct: 223 YEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSS 282
Query: 174 LVDMYAKCKCIFEAEYLFKMF--PDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV 231
LVDMYAK I ++E +F DG ++W +++ GY QNG +A+ FR M V
Sbjct: 283 LVDMYAKSARIEDSERVFSRLYCRDG---ISWNSLVAGYVQNGRYNEALRLFRQMVTAKV 339
Query: 232 ESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR 291
+ F S++ ACA ++ G Q+HG +L GF +N+++ SAL+DMY+KCG++ +AR+
Sbjct: 340 KPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARK 399
Query: 292 LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNID 351
+ + + +EVSW ++I+G A G EA+SLF++M + +K + + +VL S++
Sbjct: 400 IFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTA-CSHVG 458
Query: 352 L--------NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVI 403
L N+ V+ L E Y A+ D+ + G L+ A+ + M +
Sbjct: 459 LVDEAWGYFNSMTKVYGL--NQELEHYA----AVADLLGRAGKLEEAYNFISKMCVEPTG 512
Query: 404 S-WTSLITGCAYHGSYEEALK 423
S W++L++ C+ H + E A K
Sbjct: 513 SVWSTLLSSCSVHKNLELAEK 533
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 154/311 (49%), Gaps = 12/311 (3%)
Query: 44 VDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSS 103
VD EI G + K D D + ++++ YA S R+ +++++F+ ++ +W+S
Sbjct: 256 VDVIKGKEIH--GYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNS 313
Query: 104 LIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTC 163
L+ GY G EA LF QM +P +V+ C+ L G+Q HGY ++
Sbjct: 314 LVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGG 373
Query: 164 FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF 223
F N F+ + LVDMY+KC I A +F + + V+WT +I G++ +G+G +A+ F
Sbjct: 374 FGSNIFIASALVDMYSKCGNIKAARKIFDRM-NVLDEVSWTAIIMGHALHGHGHEAVSLF 432
Query: 224 RDMRVEGVESNQFTFPSILTACAAVSARDFG-AQVHGCILSSGFEANVYVQSALIDMYAK 282
+M+ +GV+ NQ F ++LTAC+ V D + G + +A+ D+ +
Sbjct: 433 EEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGR 492
Query: 283 CGDLDSARRLLEYSEIDNEVS-WNSMIVGFARQGFHKEALSLFKKMHARDIKIDD---FT 338
G L+ A + ++ S W++++ + HK L L +K+ + +D
Sbjct: 493 AGKLEEAYNFISKMCVEPTGSVWSTLL---SSCSVHKN-LELAEKVAEKIFTVDSENMGA 548
Query: 339 YPSVLNCFASN 349
Y + N +ASN
Sbjct: 549 YVLMCNMYASN 559
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 102/229 (44%), Gaps = 37/229 (16%)
Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
+ AK +H+ ++T + + +I +Y L A ++F ++ V++W S+I
Sbjct: 22 SQAKQLHAQFIRTQSLSHTSAS-IVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCF 80
Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
+ +AL F +MR SG CPDH V S+L +C + L FG+ VH ++ G L
Sbjct: 81 TDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDL 140
Query: 473 SVDNSLVLVYAKC-------------------------------GC-----INDANRVFD 496
N+L+ +YAK C I+ RVF+
Sbjct: 141 YTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFE 200
Query: 497 SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
M +DV+++ +I G AQ+G ++AL+ +M KPD T +L
Sbjct: 201 VMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVL 249
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 9/198 (4%)
Query: 42 ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK---- 96
ALVD +S G I A ++F++M+ D +W +I +A G EA LF E +
Sbjct: 383 ALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKP 442
Query: 97 NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
N + +++ S+ GL EA+ F M + Y +Q L++ + L G + E+ +
Sbjct: 443 NQVAFVAVLTACSHVGLVDEAWGYFNSMT-KVYGLNQ-ELEHYAAVADLLGRAGKLEEAY 500
Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF-KMFP-DGKNHVAWTTMITGYSQNG 214
+ K C + V + L+ + K + AE + K+F D +N A+ M Y+ NG
Sbjct: 501 NFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNG 560
Query: 215 YGFKAIECFRDMRVEGVE 232
+ + MR +G+
Sbjct: 561 RWKEMAKLRLRMRKKGLR 578
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 509 bits (1310), Expect = e-143, Method: Compositional matrix adjust.
Identities = 268/754 (35%), Positives = 426/754 (56%), Gaps = 3/754 (0%)
Query: 57 QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
Q+ + + D F N ++ Y+ G L A+++F+E P ++ +W+SLI GYS++G E
Sbjct: 131 QILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEE 190
Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD 176
A E++ +++ P +T+ +VL ++++G+ HG+A+K+ + V GLV
Sbjct: 191 ALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVA 250
Query: 177 MYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQF 236
MY K + +A +F D ++ V++ TMI GY + +++ F + ++ + +
Sbjct: 251 MYLKFRRPTDARRVFDEM-DVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLL 308
Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
T S+L AC + ++ +L +GF V++ LID+YAKCGD+ +AR +
Sbjct: 309 TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSM 368
Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
E + VSWNS+I G+ + G EA+ LFK M + + D TY +++ DL K
Sbjct: 369 ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGK 428
Query: 357 SVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHG 416
+HS +K+G V+NALIDMYAK G + + +F+ M D ++W ++I+ C G
Sbjct: 429 GLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFG 488
Query: 417 SYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN 476
+ L+ + MR S + PD L CA L G+++H L+ G S L + N
Sbjct: 489 DFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGN 548
Query: 477 SLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKP 536
+L+ +Y+KCGC+ +++RVF+ M RDV+TWT +I G+G++AL+ + M G P
Sbjct: 549 ALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVP 608
Query: 537 DYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKAL 596
D + F+ +++ACSH+GL + FE M Y I P +HYAC++DLL RS K+ +A+
Sbjct: 609 DSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEF 668
Query: 597 LDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKW 656
+ M +PDA++W ++L ACR GD+E ER + + EL P + + SN Y+ KW
Sbjct: 669 IQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKW 728
Query: 657 EDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEA 716
+ + +RK +K + I K PG SW+E VH+F S D P IY ++ + L+ +
Sbjct: 729 DKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKE 788
Query: 717 GYVPDMNFALHNV-EEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTA 775
GY+PD N+ EEE K + HSE+LA+AFGLL G P+++ KNLRVCGDCH
Sbjct: 789 GYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEV 848
Query: 776 MKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
K IS + R I++RD+NRFH FK G CSC D W
Sbjct: 849 TKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 223 bits (567), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 151/513 (29%), Positives = 256/513 (49%), Gaps = 13/513 (2%)
Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
L + H I D + F L+D Y+ + + +F+ KN W ++I
Sbjct: 20 LNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIR 79
Query: 209 GYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEA 268
+S+NG +A+E + +R V +++TFPS++ ACA + + G V+ IL GFE+
Sbjct: 80 AFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFES 139
Query: 269 NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH 328
+++V +AL+DMY++ G L AR++ + + + VSWNS+I G++ G+++EAL ++ ++
Sbjct: 140 DLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELK 199
Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD 388
I D FT SVL F + + + + +H +K+G VNN L+ MY K
Sbjct: 200 NSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPT 259
Query: 389 CAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
A VF+ M +D +S+ ++I G EE+++ F + + PD + VSS+L AC
Sbjct: 260 DARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACG 318
Query: 449 ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTA 508
L L + ++ LK+G +V N L+ VYAKCG + A VF+SM +D ++W +
Sbjct: 319 HLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNS 378
Query: 509 LIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVY 568
+I G Q+G EA++ + M+ + D+IT++ L+ + A F
Sbjct: 379 IISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRL-----ADLKFGKGLHSN 433
Query: 569 GIKPGP----DHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLEL 624
GIK G +ID+ + G++ ++ + M G D W ++SAC GD
Sbjct: 434 GIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSM-GTGDTVTWNTVISACVRFGDFAT 492
Query: 625 GERAANNL--FELEPMNAMPYVQLSNMYSTAGK 655
G + + E+ P A V L S A K
Sbjct: 493 GLQVTTQMRKSEVVPDMATFLVTLPMCASLAAK 525
Score = 186 bits (471), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 128/393 (32%), Positives = 203/393 (51%), Gaps = 10/393 (2%)
Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYA----KCGDLDSA 289
+ + P I A ++ S + ++H ++S G +++ + LID Y+ L
Sbjct: 3 TRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVF 62
Query: 290 RRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
RR+ S N WNS+I F++ G EAL + K+ + D +T+PSV+ A
Sbjct: 63 RRV---SPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGL 119
Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
D V+ I+ GFE FV NAL+DMY++ G L A VF+ M +D++SW SLI
Sbjct: 120 FDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLI 179
Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGC 469
+G + HG YEEAL+ + +++ S I PD VSS+L A L V++ GQ +H LKSG
Sbjct: 180 SGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVN 239
Query: 470 SSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
S + V+N LV +Y K DA RVFD M RD +++ +I G + +E+++ + +
Sbjct: 240 SVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLEN 299
Query: 530 LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGK 589
L + KPD +T +L AC H A++ + M K G +ID+ + G
Sbjct: 300 LDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKA-GFVLESTVRNILIDVYAKCGD 357
Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHGDL 622
+I A+ + + M + D W +++S GDL
Sbjct: 358 MITARDVFNSMECK-DTVSWNSIISGYIQSGDL 389
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 506 bits (1304), Expect = e-142, Method: Compositional matrix adjust.
Identities = 290/805 (36%), Positives = 436/805 (54%), Gaps = 42/805 (5%)
Query: 46 FSNSGEIDEAGQLFEKMS----DRDGFTWNTMIAAYANSG---RLREAKKLF-NETPFKN 97
N IDE ++ D D T ++A G L AK++F N +
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGT 98
Query: 98 FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
F ++SLI GY++ GL EA LF +M G P +YT L C+ G Q HG
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
+K + + FV LV YA+C + A +F + +N V+WT+MI GY++ +
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSE-RNVVSWTSMICGYARRDFAK 217
Query: 218 KAIECF-RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSAL 276
A++ F R +R E V N T +++ACA + + G +V+ I +SG E N + SAL
Sbjct: 218 DAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSAL 277
Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
+DMY KC +D A+RL + N N+M + RQG +EAL +F M ++ D
Sbjct: 278 VDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDR 337
Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK------------- 383
+ S ++ + ++ KS H +++ GFE + + NALIDMY K
Sbjct: 338 ISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR 397
Query: 384 ------------------QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
G +D A+ F M +K+++SW ++I+G +EEA++ F
Sbjct: 398 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 457
Query: 426 SDMRIS-GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
M+ G+ D V + SI SAC L L+ + ++ K+G + + +LV ++++
Sbjct: 458 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSR 517
Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
CG A +F+S+ RDV WTA I A G + A++ +D M+ +G KPD + FVG
Sbjct: 518 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGA 577
Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
L ACSH GL + + F SM K++G+ P HY CM+DLLGR+G L EA L++ M EP
Sbjct: 578 LTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEP 637
Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
+ +W +LL+ACRV G++E+ AA + L P YV LSN+Y++AG+W D A+VR
Sbjct: 638 NDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRL 697
Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
MK +G+RK PG S ++ + H F S D HP +I + +DE+ G+VPD++
Sbjct: 698 SMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSN 757
Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYL 784
L +V+E+ K L+ HSEKLA+A+GL++ +G IRI KNLRVC DCH+ K+ S VY
Sbjct: 758 VLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYN 817
Query: 785 RHIILRDSNRFHHFKAGNCSCGDYW 809
R IILRD+NRFH+ + G CSCGD+W
Sbjct: 818 REIILRDNNRFHYIRQGKCSCGDFW 842
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 142/540 (26%), Positives = 249/540 (46%), Gaps = 70/540 (12%)
Query: 16 RSKIIGPARYTHNVGNSVKPASDL--NRALVDF-SNSGEIDEAGQLFEKMSDRDGFTWNT 72
+S+ G H + + A DL +LV F + GE+D A ++F++MS+R+ +W +
Sbjct: 146 KSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTS 205
Query: 73 MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
MI YA ++A LF F ++ E P+
Sbjct: 206 MICGYARRDFAKDAVDLF------------------------------FRMVRDEEVTPN 235
Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
T+ V+ C+ L+ GE+ + + + ++N +V+ LVDMY KC I A+ LF
Sbjct: 236 SVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFD 295
Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
+ N M + Y + G +A+ F M GV ++ + S +++C+ +
Sbjct: 296 EY-GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNIL 354
Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL-------------------L 293
+G HG +L +GFE+ + +ALIDMY KC D+A R+ +
Sbjct: 355 WGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYV 414
Query: 294 EYSEID------------NEVSWNSMIVGFARQGFHKEALSLFKKMHARD-IKIDDFTYP 340
E E+D N VSWN++I G + +EA+ +F M +++ + D T
Sbjct: 415 ENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMM 474
Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
S+ + L+ AK ++ I K G + + L+DM+++ G+ + A +FN + ++
Sbjct: 475 SIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR 534
Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVH 460
DV +WT+ I A G+ E A++ F DM G+ PD V L+AC+ +++ G+++
Sbjct: 535 DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIF 594
Query: 461 AVFLKSGGCSSLSVD-NSLVLVYAKCGCINDANRVFDS--MHTRDVITWTALIMGCAQNG 517
LK G S V +V + + G + +A ++ + M DVI W +L+ C G
Sbjct: 595 YSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI-WNSLLAACRVQG 653
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 504 bits (1297), Expect = e-141, Method: Compositional matrix adjust.
Identities = 273/742 (36%), Positives = 421/742 (56%), Gaps = 15/742 (2%)
Query: 73 MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLD---IEAFELFWQMQLEGY 129
++ Y G + A+ F+ ++ + W+ +I GY G I F LF M G
Sbjct: 92 LVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF--MLSSGL 149
Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
P T +VL+ C + G + H A+K F + +V L+ +Y++ K + A
Sbjct: 150 TPDYRTFPSVLKACRT---VIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARI 206
Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
LF P ++ +W MI+GY Q+G +A+ +R + T S+L+AC
Sbjct: 207 LFDEMPV-RDMGSWNAMISGYCQSGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAG 261
Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
+ G +H + G E+ ++V + LID+YA+ G L +++ + + + +SWNS+I
Sbjct: 262 DFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIK 321
Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTG-FE 368
+ A+SLF++M I+ D T S+ + + D+ +SV ++ G F
Sbjct: 322 AYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFL 381
Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
+ NA++ MYAK G +D A VFN + + DVISW ++I+G A +G EA++ ++ M
Sbjct: 382 EDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIM 441
Query: 429 RISG-ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
G I + S+L AC++ L G ++H LK+G + V SL +Y KCG
Sbjct: 442 EEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGR 501
Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
+ DA +F + + + W LI +G G++A+ + +ML G KPD+ITFV LL A
Sbjct: 502 LEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSA 561
Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
CSH+GL + +W FE M YGI P HY CM+D+ GR+G+L A + M +PDA+
Sbjct: 562 CSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDAS 621
Query: 608 VWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
+W ALLSACRVHG+++LG+ A+ +LFE+EP + +V LSNMY++AGKWE +R +
Sbjct: 622 IWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAH 681
Query: 668 SRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALH 727
+G+RK PG S +E +++V +F + ++ HP+ ++Y ++ + +K GYVPD F L
Sbjct: 682 GKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQ 741
Query: 728 NVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHI 787
+VE++ KE L HSE+LA+AF L+ P IRIFKNLRVCGDCH+ K+IS + R I
Sbjct: 742 DVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREI 801
Query: 788 ILRDSNRFHHFKAGNCSCGDYW 809
I+RDSNRFHHFK G CSCGDYW
Sbjct: 802 IVRDSNRFHHFKNGVCSCGDYW 823
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/467 (28%), Positives = 227/467 (48%), Gaps = 28/467 (5%)
Query: 67 GFTWNTMIAA-----YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELF 121
GF W+ +AA Y+ + A+ LF+E P ++ +W+++I GY G EA L
Sbjct: 180 GFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLS 239
Query: 122 WQMQLEGYRP-SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK 180
G R T+ ++L C+ G RG H Y+IK + FV L+D+YA+
Sbjct: 240 -----NGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE 294
Query: 181 ------CKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESN 234
C+ +F+ Y+ ++ ++W ++I Y N +AI F++MR+ ++ +
Sbjct: 295 FGRLRDCQKVFDRMYV-------RDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPD 347
Query: 235 QFTFPSILTACAAVSARDFGAQVHGCILSSG-FEANVYVQSALIDMYAKCGDLDSARRLL 293
T S+ + + + V G L G F ++ + +A++ MYAK G +DSAR +
Sbjct: 348 CLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVF 407
Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR-DIKIDDFTYPSVLNCFASNIDL 352
+ + +SWN++I G+A+ GF EA+ ++ M +I + T+ SVL + L
Sbjct: 408 NWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGAL 467
Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
+H ++K G FV +L DMY K G L+ A +F + + + W +LI
Sbjct: 468 RQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACH 527
Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-S 471
+HG E+A+ F +M G+ PDH+ ++LSAC+ +++ GQ + G + S
Sbjct: 528 GFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPS 587
Query: 472 LSVDNSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNG 517
L +V +Y + G + A + SM + D W AL+ C +G
Sbjct: 588 LKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHG 634
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 213/442 (48%), Gaps = 17/442 (3%)
Query: 68 FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
F N +I YA GRLR+ +K+F+ ++ +W+S+I Y + A LF +M+L
Sbjct: 283 FVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS 342
Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVV-TGLVDMYAKCKCIFE 186
+P TL ++ + S G ++ G+ ++ + L + +V MYAK +
Sbjct: 343 RIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDS 402
Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTAC 245
A +F P+ + ++W T+I+GY+QNG+ +AIE + M EG + +NQ T+ S+L AC
Sbjct: 403 ARAVFNWLPN-TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPAC 461
Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
+ A G ++HG +L +G +V+V ++L DMY KCG L+ A L N V WN
Sbjct: 462 SQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWN 521
Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVK 364
++I G ++A+ LFK+M +K D T+ ++L+ C S + +
Sbjct: 522 TLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTD 581
Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALK 423
G ++DMY + G L+ A M D W +L++ C HG+ + L
Sbjct: 582 YGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVD--LG 639
Query: 424 YFSDMRISGICPDHVVVSSIL-----SACAELTVLEFGQQVHAVFL-KSGGCSSLSVDNS 477
+ + + P+HV +L SA V E H L K+ G SS+ VDN
Sbjct: 640 KIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNK 699
Query: 478 LVLVYAKCGCINDANRVFDSMH 499
+ + Y N + +++ M+
Sbjct: 700 VEVFYTG----NQTHPMYEEMY 717
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 175/420 (41%), Gaps = 87/420 (20%)
Query: 40 NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
N +V ++ G +D A +F + + D +WNT+I+ YA +G EA +++N
Sbjct: 388 NAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYN-------- 439
Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
M+ EG +Q T +VL CS G L++G + HG
Sbjct: 440 -----------------------IMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGR 476
Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFK 218
+K L+ FVVT L DMY KC + +A LF P N V W T+I + +G+G K
Sbjct: 477 LLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR-VNSVPWNTLIACHGFHGHGEK 535
Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALI 277
A+ F++M EGV+ + TF ++L+AC+ D G + + G ++ ++
Sbjct: 536 AVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMV 595
Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIVGFARQGFHKEALSLFKKMHARDIKIDD 336
DMY + G L++A + ++ + + S W +++ G
Sbjct: 596 DMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHG--------------------- 634
Query: 337 FTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
N+DL S H V+ GY + L +MYA G + + ++
Sbjct: 635 ------------NVDLGKIASEHLFEVEPEHVGYHVL---LSNMYASAGKWEGVDEIRSI 679
Query: 397 MQDKDV---ISWTSL---------ITGCAYHGSYEEALKYFS----DMRISGICPDHVVV 440
K + W+S+ TG H YEE + + +++ G PDH V
Sbjct: 680 AHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFV 739
Score = 109 bits (273), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 144/284 (50%), Gaps = 15/284 (5%)
Query: 333 KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM 392
+IDD V F +L +AK +H+ +V + ++ L+++Y GN+ A
Sbjct: 53 EIDD-----VHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARH 107
Query: 393 VFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD-MRISGICPDHVVVSSILSACAELT 451
F+ +Q++DV +W +I+G G+ E ++ FS M SG+ PD+ S+L AC T
Sbjct: 108 TFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR--T 165
Query: 452 VLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIM 511
V++ G ++H + LK G + V SL+ +Y++ + +A +FD M RD+ +W A+I
Sbjct: 166 VID-GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMIS 224
Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIK 571
G Q+G KEAL + + A D +T V LL AC+ AG N S +G++
Sbjct: 225 GYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAG-DFNRGVTIHSYSIKHGLE 279
Query: 572 PGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
+IDL G+L + + + D+M D W +++ A
Sbjct: 280 SELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR-DLISWNSIIKA 322
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 9/225 (4%)
Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
T L+ + +HA + S ++ + LV +Y G + A FD + RDV W +I
Sbjct: 65 TNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMI 124
Query: 511 MGCAQNGKGKEALQFYDQ-MLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYG 569
G + G E ++ + ML+ G PDY TF +L AC + + + + ++ +G
Sbjct: 125 SGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR--TVIDGNKIHCLALK--FG 180
Query: 570 IKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAA 629
A +I L R + A+ L D+M D W A++S G+ + +
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVR-DMGSWNAMISGYCQSGNAKEALTLS 239
Query: 630 NNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
N L M+++ V L + + AG + + G+ E
Sbjct: 240 NG---LRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESE 281
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 498 bits (1281), Expect = e-139, Method: Compositional matrix adjust.
Identities = 256/729 (35%), Positives = 409/729 (56%), Gaps = 71/729 (9%)
Query: 151 RGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGY 210
+ Q H +K+ + ++ L+ Y+ C +A+ + + PD + +++++I
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIY-SFSSLIYAL 91
Query: 211 SQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV 270
++ ++I F M G+ + P++ CA +SA G Q+H SG + +
Sbjct: 92 TKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDA 151
Query: 271 YVQSALIDMYAKCGDLDSARRL----------------------------------LEYS 296
+VQ ++ MY +CG + AR++ +E S
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 297 EID-NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
I+ N VSWN ++ GF R G+HKEA+ +F+K+H D T SVL + LN
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271
Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL---------------------------- 387
+ +H ++K G K V +A+IDMY K G++
Sbjct: 272 RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331
Query: 388 ---DCAFMVFNLMQDK----DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVV 440
D A +F L +++ +V+SWTS+I GCA +G EAL+ F +M+++G+ P+HV +
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391
Query: 441 SSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHT 500
S+L AC + L G+ H ++ ++ V ++L+ +YAKCG IN + VF+ M T
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT 451
Query: 501 RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWY 560
++++ W +L+ G + +GK KE + ++ ++ KPD+I+F LL AC GL + Y
Sbjct: 452 KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKY 511
Query: 561 FESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHG 620
F+ M + YGIKP +HY+CM++LLGR+GKL EA L+ +M EPD+ VW ALL++CR+
Sbjct: 512 FKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQN 571
Query: 621 DLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWV 680
+++L E AA LF LEP N YV LSN+Y+ G W + +R M+S G++K PGCSW+
Sbjct: 572 NVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWI 631
Query: 681 ETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAY 740
+ ++V+ ++ D+ HP I K+DEI ++++G+ P+++FALH+VEE+ +E L
Sbjct: 632 QVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWG 691
Query: 741 HSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKA 800
HSEKLAV FGLL P G P+++ KNLR+CGDCH +K+IS+ R I +RD+NRFHHFK
Sbjct: 692 HSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKD 751
Query: 801 GNCSCGDYW 809
G CSCGD+W
Sbjct: 752 GICSCGDFW 760
Score = 183 bits (464), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 129/529 (24%), Positives = 232/529 (43%), Gaps = 71/529 (13%)
Query: 56 GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
++ + + DG+ +IA+Y+N +A + P +++SSLIY + L
Sbjct: 39 ARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFT 98
Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
++ +F +M G P + L N+ ++C+ + G+Q H + + D++AFV +
Sbjct: 99 QSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMF 158
Query: 176 DMYAKCKCIFEAEYLFKMFPDG----------------------------------KNHV 201
MY +C + +A +F D N V
Sbjct: 159 HMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIV 218
Query: 202 AWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI 261
+W +++G++++GY +A+ F+ + G +Q T S+L + + G +HG +
Sbjct: 219 SWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYV 278
Query: 262 LSSGFEANVYVQSALIDMYAKCGD-------------------------------LDSAR 290
+ G + V SA+IDMY K G +D A
Sbjct: 279 IKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKAL 338
Query: 291 RLLEYSEID----NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCF 346
+ E + N VSW S+I G A+ G EAL LF++M +K + T PS+L
Sbjct: 339 EMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPAC 398
Query: 347 ASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWT 406
+ L + +S H V+ V +ALIDMYAK G ++ + +VFN+M K+++ W
Sbjct: 399 GNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWN 458
Query: 407 SLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
SL+ G + HG +E + F + + + PD + +S+LSAC ++ + + G + + +
Sbjct: 459 SLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEE 518
Query: 467 GGCSS-LSVDNSLVLVYAKCGCINDANRVFDSMH-TRDVITWTALIMGC 513
G L + +V + + G + +A + M D W AL+ C
Sbjct: 519 YGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSC 567
Score = 179 bits (454), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 231/480 (48%), Gaps = 48/480 (10%)
Query: 50 GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK----NFFTWSSLI 105
G + +A ++F++MSD+D T + ++ AYA G L E ++ +E N +W+ ++
Sbjct: 165 GRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGIL 224
Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
G++ G EA +F ++ G+ P Q T+ +VL +L G HGY IK
Sbjct: 225 SGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLL 284
Query: 166 LNAFVVTGLVDMYAKCKCIF-------------------------------EAEYLFKMF 194
+ V++ ++DMY K ++ +A +F++F
Sbjct: 285 KDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELF 344
Query: 195 PDGK---NHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
+ N V+WT++I G +QNG +A+E FR+M+V GV+ N T PS+L AC ++A
Sbjct: 345 KEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAAL 404
Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
G HG + NV+V SALIDMYAKCG ++ ++ + N V WNS++ GF
Sbjct: 405 GHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGF 464
Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGY 370
+ G KE +S+F+ + +K D ++ S+L+ C + K + + G +
Sbjct: 465 SMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPR 524
Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
+ ++++ + G L A+ + M + D W +L+ C + + L + +
Sbjct: 525 LEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVD--LAEIAAEK 582
Query: 430 ISGICPD----HVVVSSILSACAELT-VLEFGQQVHAVFLKSG-GCSSLSVDNSLVLVYA 483
+ + P+ +V++S+I +A T V ++ ++ LK GCS + V N + + A
Sbjct: 583 LFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLA 642
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 496 bits (1276), Expect = e-139, Method: Compositional matrix adjust.
Identities = 247/592 (41%), Positives = 366/592 (61%), Gaps = 5/592 (0%)
Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALI 277
+A++ ++ G+ ++ T+ ++ C + A G + + +G +++ + LI
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103
Query: 278 DMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDF 337
+MY K L+ A +L + N +SW +MI +++ H++AL L M +++ + +
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163
Query: 338 TYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
TY SVL S +++ + +H I+K G E FV +ALID++AK G + A VF+ M
Sbjct: 164 TYSSVLR---SCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220
Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
D I W S+I G A + + AL+ F M+ +G + ++S+L AC L +LE G
Sbjct: 221 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 280
Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
Q H +K L ++N+LV +Y KCG + DA RVF+ M RDVITW+ +I G AQNG
Sbjct: 281 QAHVHIVKYD--QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG 338
Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY 577
+EAL+ +++M + GTKP+YIT VG+LFACSHAGL E+ +YF SM K+YGI P +HY
Sbjct: 339 YSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY 398
Query: 578 ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEP 637
CMIDLLG++GKL +A LL++M EPDA W+ LL ACRV ++ L E AA + L+P
Sbjct: 399 GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDP 458
Query: 638 MNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHP 697
+A Y LSN+Y+ + KW+ +R M+ RGI+KEPGCSW+E N Q+H FI D HP
Sbjct: 459 EDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHP 518
Query: 698 LRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQG 757
++ K+++++ + GYVP+ NF L ++E E E L +HSEKLA+AFGL+TLP
Sbjct: 519 QIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIE 578
Query: 758 APIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
IRI KNLR+CGDCH K S + +R I++RD R+HHF+ G CSCGDYW
Sbjct: 579 KVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 166 bits (420), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 191/380 (50%), Gaps = 10/380 (2%)
Query: 68 FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
F N +I Y L +A +LF++ P +N +W+++I YS + +A EL M +
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
RP+ YT +VLR C+ + H IK + + FV + L+D++AK +A
Sbjct: 157 NVRPNVYTYSSVLRSCN---GMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDA 213
Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
+F G + + W ++I G++QN A+E F+ M+ G + Q T S+L AC
Sbjct: 214 LSVFDEMVTG-DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTG 272
Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
++ + G Q H I+ ++ ++ + +AL+DMY KCG L+ A R+ + + ++W++M
Sbjct: 273 LALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTM 330
Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSLIVKTG 366
I G A+ G+ +EAL LF++M + K + T VL C + + + S+ G
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYG 390
Query: 367 FEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALKYF 425
+ + +ID+ K G LD A + N M+ + D ++W +L+ C + L +
Sbjct: 391 IDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNM--VLAEY 448
Query: 426 SDMRISGICPDHVVVSSILS 445
+ ++ + P+ ++LS
Sbjct: 449 AAKKVIALDPEDAGTYTLLS 468
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 150/307 (48%), Gaps = 6/307 (1%)
Query: 64 DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
+ D F + +I +A G +A +F+E + W+S+I G++ A ELF +
Sbjct: 191 ESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKR 250
Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
M+ G+ Q TL +VLR C+ LL+ G Q H + +K +D + + LVDMY KC
Sbjct: 251 MKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGS 308
Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
+ +A +F + ++ + W+TMI+G +QNGY +A++ F M+ G + N T +L
Sbjct: 309 LEDALRVFNQMKE-RDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLF 367
Query: 244 ACAAVSARDFGAQVHGCILS-SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID-NE 301
AC+ + G + G + +ID+ K G LD A +LL E + +
Sbjct: 368 ACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDA 427
Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
V+W +++ Q A KK+ A D + D TY + N +A++ ++ + + +
Sbjct: 428 VTWRTLLGACRVQRNMVLAEYAAKKVIALDPE-DAGTYTLLSNIYANSQKWDSVEEIRTR 486
Query: 362 IVKTGFE 368
+ G +
Sbjct: 487 MRDRGIK 493
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 127/300 (42%), Gaps = 41/300 (13%)
Query: 407 SLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
S T Y A+K ++ G+ D S ++ C + G + +
Sbjct: 31 SEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFN 90
Query: 467 GGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFY 526
G + + N L+ +Y K +NDA+++FD M R+VI+WT +I ++ ++AL+
Sbjct: 91 GHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELL 150
Query: 527 DQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGR 586
ML +P+ T+ +L +C+ G+++ + + + G++ + +ID+ +
Sbjct: 151 VLMLRDNVRPNVYTYSSVLRSCN--GMSDVRMLHCGIIKE--GLESDVFVRSALIDVFAK 206
Query: 587 SGKLIEAKALLDQMVGEPDATVWKAL---------------------------------- 612
G+ +A ++ D+MV DA VW ++
Sbjct: 207 LGEPEDALSVFDEMV-TGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTS 265
Query: 613 -LSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
L AC LELG +A ++ + + + + L +MY G EDA RV MK R +
Sbjct: 266 VLRACTGLALLELGMQAHVHIVKYD-QDLILNNALVDMYCKCGSLEDALRVFNQMKERDV 324
Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 35/172 (20%)
Query: 39 LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
LN ALVD + G +++A ++F +M +RD TW+TMI+ A +G +EA KLF
Sbjct: 295 LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFE------ 348
Query: 98 FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
+M+ G +P+ T+ VL CS GLL+ G ++
Sbjct: 349 -------------------------RMKSSGTKPNYITIVGVLFACSHAGLLEDG-WYYF 382
Query: 158 YAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
++K + ++ ++D+ K + +A L + V W T++
Sbjct: 383 RSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 494 bits (1271), Expect = e-138, Method: Compositional matrix adjust.
Identities = 263/688 (38%), Positives = 404/688 (58%), Gaps = 10/688 (1%)
Query: 131 PSQ-YTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
P+Q L ++LR+C+ KGL +G Q H Y +K+ LN L+DMY KC+ A
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
+F P+ +N V+W+ +++G+ NG ++ F +M +G+ N+FTF + L AC ++
Sbjct: 63 VFDSMPE-RNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121
Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
A + G Q+HG L GFE V V ++L+DMY+KCG ++ A ++ + +SWN+MI
Sbjct: 122 ALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIA 181
Query: 310 GFARQGFHKEALSLFKKMHARDIK--IDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
GF G+ +AL F M +IK D+FT S+L +S + K +H +V++GF
Sbjct: 182 GFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGF 241
Query: 368 E--GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
+ +L+D+Y K G L A F+ +++K +ISW+SLI G A G + EA+ F
Sbjct: 242 HCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLF 301
Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
++ D +SSI+ A+ +L G+Q+ A+ +K SV NS+V +Y KC
Sbjct: 302 KRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKC 361
Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
G +++A + F M +DVI+WT +I G ++G GK++++ + +ML +PD + ++ +L
Sbjct: 362 GLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVL 421
Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
ACSH+G+ + F + + +GIKP +HYAC++DLLGR+G+L EAK L+D M +P+
Sbjct: 422 SACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPN 481
Query: 606 ATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKL 665
+W+ LLS CRVHGD+ELG+ L ++ N YV +SN+Y AG W + R+L
Sbjct: 482 VGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNAREL 541
Query: 666 MKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEI-MLLIKEAGYVPDMNF 724
+G++KE G SWVE +VH F S + HPL I + E L +E GYV +
Sbjct: 542 GNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKH 601
Query: 725 ALHNVEEEGKEIGLAYHSEKLAVAFGLLT--LPQ-GAPIRIFKNLRVCGDCHTAMKYISA 781
LH++++E KE L HSEKLA+ L T L Q G IR+FKNLRVC DCH +K +S
Sbjct: 602 ELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSK 661
Query: 782 VYLRHIILRDSNRFHHFKAGNCSCGDYW 809
+ ++RD+ RFH F+ G CSCGDYW
Sbjct: 662 ITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 253 bits (646), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 159/491 (32%), Positives = 266/491 (54%), Gaps = 18/491 (3%)
Query: 47 SNSGEIDEAGQ----LFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWS 102
+ G D+ GQ L + S + T N +I Y A K+F+ P +N +WS
Sbjct: 17 TRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWS 76
Query: 103 SLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT 162
+L+ G+ G + LF +M +G P+++T L+ C L L++G Q HG+ +K
Sbjct: 77 ALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKI 136
Query: 163 CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIEC 222
F++ V LVDMY+KC I EAE +F+ D ++ ++W MI G+ GYG KA++
Sbjct: 137 GFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVD-RSLISWNAMIAGFVHAGYGSKALDT 195
Query: 223 FRDMRVEGVES--NQFTFPSILTACAAVSARDFGAQVHGCILSSGFE--ANVYVQSALID 278
F M+ ++ ++FT S+L AC++ G Q+HG ++ SGF ++ + +L+D
Sbjct: 196 FGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVD 255
Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
+Y KCG L SAR+ + + +SW+S+I+G+A++G EA+ LFK++ + +ID F
Sbjct: 256 LYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFA 315
Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVK--TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNL 396
S++ FA L K + +L VK +G E V N+++DMY K G +D A F
Sbjct: 316 LSSIIGVFADFALLRQGKQMQALAVKLPSGLE--TSVLNSVVDMYLKCGLVDEAEKCFAE 373
Query: 397 MQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFG 456
MQ KDVISWT +ITG HG +++++ F +M I PD V ++LSAC+ +++ G
Sbjct: 374 MQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEG 433
Query: 457 QQVHAVFLKSGGCSSLSVDNSLVL-VYAKCGCINDANRVFDSMHTR-DVITWTALIMGCA 514
+++ + L++ G + V+ + + G + +A + D+M + +V W L+ C
Sbjct: 434 EELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCR 493
Query: 515 QNGK---GKEA 522
+G GKE
Sbjct: 494 VHGDIELGKEV 504
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 195/389 (50%), Gaps = 39/389 (10%)
Query: 38 DLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFK 96
++ +LVD +S G I+EA ++F ++ DR +WN MIA + ++
Sbjct: 143 EVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHA---------------- 186
Query: 97 NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
GY + LD F + + ++ RP ++TL ++L+ CS G++ G+Q H
Sbjct: 187 ----------GYGSKALD--TFGMMQEANIK-ERPDEFTLTSLLKACSSTGMIYAGKQIH 233
Query: 157 GYAIKTCFDL--NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNG 214
G+ +++ F +A + LVD+Y KC +F A F + K ++W+++I GY+Q G
Sbjct: 234 GFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKE-KTMISWSSLILGYAQEG 292
Query: 215 YGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI--LSSGFEANVYV 272
+A+ F+ ++ + + F SI+ A + G Q+ L SG E +V
Sbjct: 293 EFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL- 351
Query: 273 QSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI 332
++++DMY KCG +D A + ++ + +SW +I G+ + G K+++ +F +M +I
Sbjct: 352 -NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNI 410
Query: 333 KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT-GFEGYKFVNNALIDMYAKQGNLDCAF 391
+ D+ Y +VL+ + + + + + S +++T G + ++D+ + G L A
Sbjct: 411 EPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAK 470
Query: 392 MVFNLMQDK-DVISWTSLITGCAYHGSYE 419
+ + M K +V W +L++ C HG E
Sbjct: 471 HLIDTMPIKPNVGIWQTLLSLCRVHGDIE 499
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 68/178 (38%), Gaps = 40/178 (22%)
Query: 36 ASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF 95
S LN + + G +DEA + F +M +D +W +I
Sbjct: 348 TSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVIT-------------------- 387
Query: 96 KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ- 154
GY +GL ++ +F++M P + VL CS G+++ GE+
Sbjct: 388 -----------GYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEEL 436
Query: 155 ----FHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
+ IK + A V VD+ + + EA++L P N W T+++
Sbjct: 437 FSKLLETHGIKPRVEHYACV----VDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLS 490
>sp|Q9FK93|PP406_ARATH Pentatricopeptide repeat-containing protein At5g39680
OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1
Length = 710
Score = 493 bits (1270), Expect = e-138, Method: Compositional matrix adjust.
Identities = 252/678 (37%), Positives = 399/678 (58%), Gaps = 5/678 (0%)
Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAI---KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
L+ +L++C+ L+ GE H + I ++ +A+ + L+++Y KC+ A LF
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACAAVSAR 251
+ P+ +N V+W M+ GY +G+ F+ ++ F+ M G N+F + +C+
Sbjct: 94 LMPE-RNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRI 152
Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
+ G Q HGC L G ++ +V++ L+ MY+ C A R+L+ + ++S + G+
Sbjct: 153 EEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGY 212
Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
G KE L + +K D ++ TY S L F++ DLN A VHS +V+ GF
Sbjct: 213 LECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEV 272
Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
ALI+MY K G + A VF+ +++ T+++ S+EEAL FS M
Sbjct: 273 EACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTK 332
Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
+ P+ + +L++ AEL++L+ G +H + LKSG + + V N+LV +YAK G I DA
Sbjct: 333 EVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDA 392
Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
+ F M RD++TW +I GC+ +G G+EAL+ +D+M+ G P+ ITF+G+L ACSH
Sbjct: 393 RKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHI 452
Query: 552 GLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKA 611
G E YF + K + ++P HY C++ LL ++G +A+ + E D W+
Sbjct: 453 GFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRT 512
Query: 612 LLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGI 671
LL+AC V + LG++ A E P ++ YV LSN+++ + +WE A+VR LM +RG+
Sbjct: 513 LLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGV 572
Query: 672 RKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEE 731
+KEPG SW+ +Q H+F++ED HP T IY+K+ E+M IK GY PD+ A H+V+E
Sbjct: 573 KKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDE 632
Query: 732 EGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRD 791
E +E L+YHSEKLAVA+GL+ P+ +P+ + KN+R+C DCH+A+K IS + R+I++RD
Sbjct: 633 EQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRD 692
Query: 792 SNRFHHFKAGNCSCGDYW 809
SNRFHHF G CSC DYW
Sbjct: 693 SNRFHHFLDGQCSCCDYW 710
Score = 213 bits (541), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 143/492 (29%), Positives = 239/492 (48%), Gaps = 17/492 (3%)
Query: 35 PASDLNRALVDFSNS-----GEIDEAGQLFEKMSDR--DGFTWNTMIAAYANSGRLREAK 87
P LN L +NS GE A + S R D + N++I Y A+
Sbjct: 30 PIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRAR 89
Query: 88 KLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVLRLCSLK 146
KLF+ P +N +W +++ GY N G D E +LF M G RP+++ V + CS
Sbjct: 90 KLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNS 149
Query: 147 GLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTM 206
G ++ G+QFHG +K + FV LV MY+ C EA + P V +++
Sbjct: 150 GRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSV-FSSA 208
Query: 207 ITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGF 266
++GY + G + ++ R E N T+ S L + + + QVH ++ GF
Sbjct: 209 LSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGF 268
Query: 267 EANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKK 326
A V ALI+MY KCG + A+R+ + + N +++ + + +EAL+LF K
Sbjct: 269 NAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSK 328
Query: 327 MHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGN 386
M +++ +++T+ +LN A L +H L++K+G+ + V NAL++MYAK G+
Sbjct: 329 MDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGS 388
Query: 387 LDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSA 446
++ A F+ M +D+++W ++I+GC++HG EAL+ F M +G P+ + +L A
Sbjct: 389 IEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQA 448
Query: 447 CAELTVLEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDSMHTR---- 501
C+ + +E G +K + +V + +K G DA D M T
Sbjct: 449 CSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAE---DFMRTAPIEW 505
Query: 502 DVITWTALIMGC 513
DV+ W L+ C
Sbjct: 506 DVVAWRTLLNAC 517
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 78/148 (52%), Gaps = 4/148 (2%)
Query: 71 NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
N ++ YA SG + +A+K F+ F++ TW+++I G S++GL EA E F +M G
Sbjct: 377 NALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEI 436
Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAE 188
P++ T VL+ CS G +++G + +K FD+ + T +V + +K +AE
Sbjct: 437 PNRITFIGVLQACSHIGFVEQGLHYFNQLMKK-FDVQPDIQHYTCIVGLLSKAGMFKDAE 495
Query: 189 YLFKMFPDGKNHVAWTTMITG-YSQNGY 215
+ P + VAW T++ Y + Y
Sbjct: 496 DFMRTAPIEWDVVAWRTLLNACYVRRNY 523
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 493 bits (1269), Expect = e-138, Method: Compositional matrix adjust.
Identities = 253/659 (38%), Positives = 387/659 (58%), Gaps = 4/659 (0%)
Query: 153 EQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQ 212
+Q H + + F++T L+ + I A +F P + W +I GYS+
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQI-FPWNAIIRGYSR 96
Query: 213 NGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYV 272
N + A+ + +M++ V + FTFP +L AC+ +S G VH + GF+A+V+V
Sbjct: 97 NNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156
Query: 273 QSALIDMYAKCGDLDSARRLLEYSEIDNE--VSWNSMIVGFARQGFHKEALSLFKKMHAR 330
Q+ LI +YAKC L SAR + E + VSW +++ +A+ G EAL +F +M
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216
Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
D+K D SVLN F DL +S+H+ +VK G E + +L MYAK G + A
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276
Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
++F+ M+ ++I W ++I+G A +G EA+ F +M + PD + ++S +SACA++
Sbjct: 277 KILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336
Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
LE + ++ +S + + ++L+ ++AKCG + A VFD RDV+ W+A+I
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMI 396
Query: 511 MGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGI 570
+G +G+ +EA+ Y M G P+ +TF+GLL AC+H+G+ W+F M + I
Sbjct: 397 VGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKI 455
Query: 571 KPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAAN 630
P HYAC+IDLLGR+G L +A ++ M +P TVW ALLSAC+ H +ELGE AA
Sbjct: 456 NPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQ 515
Query: 631 NLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFI 690
LF ++P N YVQLSN+Y+ A W+ A VR MK +G+ K+ GCSWVE ++ F
Sbjct: 516 QLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFR 575
Query: 691 SEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFG 750
D+ HP +I +++ I +KE G+V + + +LH++ +E E L HSE++A+A+G
Sbjct: 576 VGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYG 635
Query: 751 LLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
L++ PQG P+RI KNLR C +CH A K IS + R I++RD+NRFHHFK G CSCGDYW
Sbjct: 636 LISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 226 bits (576), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 230/452 (50%), Gaps = 2/452 (0%)
Query: 67 GFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL 126
GF +I A ++ G + A+++F++ P F W+++I GYS +A ++ MQL
Sbjct: 53 GFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQL 112
Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
P +T ++L+ CS LQ G H + FD + FV GL+ +YAKC+ +
Sbjct: 113 ARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGS 172
Query: 187 AEYLFKMFP-DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTAC 245
A +F+ P + V+WT +++ Y+QNG +A+E F MR V+ + S+L A
Sbjct: 173 ARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAF 232
Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
+ G +H ++ G E + +L MYAKCG + +A+ L + + N + WN
Sbjct: 233 TCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWN 292
Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
+MI G+A+ G+ +EA+ +F +M +D++ D + S ++ A L A+S++ + ++
Sbjct: 293 AMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS 352
Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
+ F+++ALIDM+AK G+++ A +VF+ D+DV+ W+++I G HG EA+ +
Sbjct: 353 DYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLY 412
Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
M G+ P+ V +L AC ++ G ++ + +
Sbjct: 413 RAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRA 472
Query: 486 GCINDANRVFDSMHTRDVIT-WTALIMGCAQN 516
G ++ A V M + +T W AL+ C ++
Sbjct: 473 GHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504
Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 137/469 (29%), Positives = 221/469 (47%), Gaps = 51/469 (10%)
Query: 56 GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF--KNFFTWSSLIYGYSNYGL 113
Q+F D D F N +IA YA RL A+ +F P + +W++++ Y+ G
Sbjct: 143 AQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE 202
Query: 114 DIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTG 173
+EA E+F QM+ +P L +VL + L++G H +K ++ ++
Sbjct: 203 PMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS 262
Query: 174 LVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES 233
L MYAKC + A+ LF N + W MI+GY++NGY +AI+ F +M + V
Sbjct: 263 LNTMYAKCGQVATAKILFDKM-KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321
Query: 234 NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLL 293
+ + S ++ACA V + + ++ + S + +V++ SALIDM+AKCG ++ AR +
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381
Query: 294 EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLN 353
+ + + V W++MIVG+ G +EA+SL++ M + +D T+ +L A N
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL--MACN---- 435
Query: 354 NAKSVHSLIVKTGFEGYKFVNN--------------ALIDMYAKQGNLDCAFMVFNLMQ- 398
HS +V+ EG+ F N +ID+ + G+LD A+ V M
Sbjct: 436 -----HSGMVR---EGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPV 487
Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD---HVVVSSILSACAEL--TVL 453
V W +L++ C H E L ++ ++ I P H V S L A A L V
Sbjct: 488 QPGVTVWGALLSACKKHRHVE--LGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVA 545
Query: 454 EFGQQVHAVFL-KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTR 501
E ++ L K GCS + V L +A RV D H R
Sbjct: 546 EVRVRMKEKGLNKDVGCSWVEVRGRL-----------EAFRVGDKSHPR 583
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 112/264 (42%), Gaps = 33/264 (12%)
Query: 46 FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
++ G++ A LF+KM + WN MI+ YA +G REA +F+E K+
Sbjct: 267 YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDV------- 319
Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
RP ++ + + C+ G L++ + Y ++ +
Sbjct: 320 ------------------------RPDTISITSAISACAQVGSLEQARSMYEYVGRSDYR 355
Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
+ F+ + L+DM+AKC + A +F D ++ V W+ MI GY +G +AI +R
Sbjct: 356 DDVFISSALIDMFAKCGSVEGARLVFDRTLD-RDVVVWSAMIVGYGLHGRAREAISLYRA 414
Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
M GV N TF +L AC G + + +ID+ + G
Sbjct: 415 MERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGH 474
Query: 286 LDSARRLLEYSEIDNEVS-WNSMI 308
LD A +++ + V+ W +++
Sbjct: 475 LDQAYEVIKCMPVQPGVTVWGALL 498
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 80/186 (43%), Gaps = 5/186 (2%)
Query: 29 VGNSVKPAS-DLNRALVDFSNSGEIDEAGQLFEKMSDRD----GFTWNTMIAAYANSGRL 83
+ V+P + + A+ + G +++A ++E + D F + +I +A G +
Sbjct: 315 INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSV 374
Query: 84 REAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLC 143
A+ +F+ T ++ WS++I GY +G EA L+ M+ G P+ T +L C
Sbjct: 375 EGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMAC 434
Query: 144 SLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAW 203
+ G+++ G F + ++D+ + + +A + K P W
Sbjct: 435 NHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVW 494
Query: 204 TTMITG 209
+++
Sbjct: 495 GALLSA 500
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 491 bits (1264), Expect = e-138, Method: Compositional matrix adjust.
Identities = 272/751 (36%), Positives = 416/751 (55%), Gaps = 8/751 (1%)
Query: 66 DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
D F N +++ Y G + +A +LF+ P +N +W+S+I +S+ G E+F L +M
Sbjct: 221 DVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMM 280
Query: 126 LE----GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
E + P TL VL +C+ + + G+ HG+A+K D + L+DMY+KC
Sbjct: 281 EENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKC 340
Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV--EGVESNQFTFP 239
CI A+ +FKM + KN V+W TM+ G+S G + R M E V++++ T
Sbjct: 341 GCITNAQMIFKM-NNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTIL 399
Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
+ + C S ++H L F N V +A + YAKCG L A+R+
Sbjct: 400 NAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSK 459
Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
SWN++I G A+ + +L +M + D FT S+L+ + L K VH
Sbjct: 460 TVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVH 519
Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
I++ E FV +++ +Y G L +F+ M+DK ++SW ++ITG +G +
Sbjct: 520 GFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPD 579
Query: 420 EALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLV 479
AL F M + GI + + + AC+ L L G++ HA LK + SL+
Sbjct: 580 RALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLI 639
Query: 480 LVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYI 539
+YAK G I +++VF+ + + +W A+IMG +G KEA++ +++M G PD +
Sbjct: 640 DMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDL 699
Query: 540 TFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEA-KALLD 598
TF+G+L AC+H+GL Y + M +G+KP HYAC+ID+LGR+G+L +A + + +
Sbjct: 700 TFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAE 759
Query: 599 QMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWED 658
+M E D +WK+LLS+CR+H +LE+GE+ A LFELEP YV LSN+Y+ GKWED
Sbjct: 760 EMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWED 819
Query: 659 AARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGY 718
+VR+ M +RK+ GCSW+E N +V F+ +R +I S + + I + GY
Sbjct: 820 VRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGY 879
Query: 719 VPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKY 778
PD H++ EE K L HSEKLA+ +GL+ +G IR++KNLR+C DCH A K
Sbjct: 880 RPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKL 939
Query: 779 ISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
IS V R I++RD+ RFHHFK G CSCGDYW
Sbjct: 940 ISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 161/560 (28%), Positives = 272/560 (48%), Gaps = 20/560 (3%)
Query: 73 MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRP 131
+I YA G +++ +F+ KN F W+++I YS L E E F +M P
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
+T V++ C+ + G HG +KT + FV LV Y + +A LF
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVES----NQFTFPSILTACAA 247
+ P+ +N V+W +MI +S NG+ ++ +M E + + T ++L CA
Sbjct: 246 DIMPE-RNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAR 304
Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
G VHG + + + + +AL+DMY+KCG + +A+ + + + N VSWN+M
Sbjct: 305 EREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTM 364
Query: 308 IVGFARQGFHKEALSLFKKMHA--RDIKIDDFT-YPSVLNCFASNIDLNNAKSVHSLIVK 364
+ GF+ +G + ++M A D+K D+ T +V CF + L + K +H +K
Sbjct: 365 VGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF-LPSLKELHCYSLK 423
Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
F + V NA + YAK G+L A VF+ ++ K V SW +LI G A +L
Sbjct: 424 QEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDA 483
Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
M+ISG+ PD V S+LSAC++L L G++VH +++ L V S++ +Y
Sbjct: 484 HLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIH 543
Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
CG + +FD+M + +++W +I G QNG AL + QM+ G + I+ + +
Sbjct: 544 CGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPV 603
Query: 545 LFACSHAGLAENARWYFESMDKVYGIK---PGPDHYAC-MIDLLGRSGKLIEAKALLDQM 600
ACS L + R E+ Y +K AC +ID+ ++G + ++ + + +
Sbjct: 604 FGACS---LLPSLRLGREA--HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGL 658
Query: 601 VGEPDATVWKALLSACRVHG 620
E W A++ +HG
Sbjct: 659 -KEKSTASWNAMIMGYGIHG 677
Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/385 (30%), Positives = 189/385 (49%), Gaps = 8/385 (2%)
Query: 172 TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEG 230
T ++ MYA C ++ ++F KN W +I+ YS+N + +E F +M
Sbjct: 124 TRIITMYAMCGSPDDSRFVFDALR-SKNLFQWNAVISSYSRNELYDEVLETFIEMISTTD 182
Query: 231 VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
+ + FT+P ++ ACA +S G VHG ++ +G +V+V +AL+ Y G + A
Sbjct: 183 LLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDAL 242
Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD----IKIDDFTYPSVLNCF 346
+L + N VSWNSMI F+ GF +E+ L +M + D T +VL
Sbjct: 243 QLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC 302
Query: 347 ASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWT 406
A ++ K VH VK + +NNAL+DMY+K G + A M+F + +K+V+SW
Sbjct: 303 AREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWN 362
Query: 407 SLITGCAYHGSYEEALKYFSDMRISG--ICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
+++ G + G M G + D V + + + C + L +++H L
Sbjct: 363 TMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSL 422
Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ 524
K + V N+ V YAKCG ++ A RVF + ++ V +W ALI G AQ+ + +L
Sbjct: 423 KQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLD 482
Query: 525 FYDQMLARGTKPDYITFVGLLFACS 549
+ QM G PD T LL ACS
Sbjct: 483 AHLQMKISGLLPDSFTVCSLLSACS 507
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 132/508 (25%), Positives = 240/508 (47%), Gaps = 44/508 (8%)
Query: 16 RSKIIGPARYTHNVGNSVKPASD----LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTW 70
R + IG + H G +VK D LN AL+D +S G I A +F+ ++++ +W
Sbjct: 304 REREIGLGKGVH--GWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSW 361
Query: 71 NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL--EG 128
NTM+ ++ G +G F++ QM E
Sbjct: 362 NTMVGGFSAEG---------------------------DTHG----TFDVLRQMLAGGED 390
Query: 129 YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
+ + T+ N + +C + L ++ H Y++K F N V V YAKC + A+
Sbjct: 391 VKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQ 450
Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
+F K +W +I G++Q+ +++ M++ G+ + FT S+L+AC+ +
Sbjct: 451 RVFHGIR-SKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL 509
Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMI 308
+ G +VHG I+ + E +++V +++ +Y CG+L + + L + E + VSWN++I
Sbjct: 510 KSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVI 569
Query: 309 VGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
G+ + GF AL +F++M I++ + V + L + H+ +K E
Sbjct: 570 TGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLE 629
Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM 428
F+ +LIDMYAK G++ + VFN +++K SW ++I G HG +EA+K F +M
Sbjct: 630 DDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEM 689
Query: 429 RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS-SLSVDNSLVLVYAKCGC 487
+ +G PD + +L+AC ++ G + S G +L ++ + + G
Sbjct: 690 QRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQ 749
Query: 488 INDANRVF--DSMHTRDVITWTALIMGC 513
++ A RV + DV W +L+ C
Sbjct: 750 LDKALRVVAEEMSEEADVGIWKSLLSSC 777
Score = 146 bits (369), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 154/318 (48%), Gaps = 8/318 (2%)
Query: 241 ILTACAAVSARDFGAQVHGCIL-SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
+L A + G ++H + S+ + + + +I MYA CG D +R + +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKM-HARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
N WN++I ++R + E L F +M D+ D FTYP V+ A D+ +V
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
H L+VKTG FV NAL+ Y G + A +F++M +++++SW S+I + +G
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 419 EEALKYFSDMRIS----GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
EE+ +M PD + ++L CA + G+ VH +K L +
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329
Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARG- 533
+N+L+ +Y+KCGCI +A +F + ++V++W ++ G + G QMLA G
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 389
Query: 534 -TKPDYITFVGLLFACSH 550
K D +T + + C H
Sbjct: 390 DVKADEVTILNAVPVCFH 407
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 489 bits (1258), Expect = e-137, Method: Compositional matrix adjust.
Identities = 270/753 (35%), Positives = 422/753 (56%), Gaps = 6/753 (0%)
Query: 58 LFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEA 117
+ +K S D F N ++ AY +G ++A LF+E P +N ++ +L GY+ +
Sbjct: 75 ILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQ----DP 130
Query: 118 FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDM 177
L+ ++ EG+ + + + L+L + H +K +D NAFV L++
Sbjct: 131 IGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINA 190
Query: 178 YAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFT 237
Y+ C + A +F+ K+ V W +++ Y +NGY +++ MR+ G N +T
Sbjct: 191 YSVCGSVDSARTVFEGIL-CKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYT 249
Query: 238 FPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE 297
F + L A + A DF VHG IL + + + V L+ +Y + GD+ A ++
Sbjct: 250 FDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMP 309
Query: 298 IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKS 357
++ V W+ MI F + GF EA+ LF +M + ++FT S+LN A +
Sbjct: 310 KNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQ 369
Query: 358 VHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGS 417
+H L+VK GF+ +V+NALID+YAK +D A +F + K+ +SW ++I G G
Sbjct: 370 LHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGE 429
Query: 418 YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNS 477
+A F + + + V SS L ACA L ++ G QVH + +K+ ++V NS
Sbjct: 430 GGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNS 489
Query: 478 LVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD 537
L+ +YAKCG I A VF+ M T DV +W ALI G + +G G++AL+ D M R KP+
Sbjct: 490 LIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPN 549
Query: 538 YITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALL 597
+TF+G+L CS+AGL + + FESM + +GI+P +HY CM+ LLGRSG+L +A L+
Sbjct: 550 GLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLI 609
Query: 598 DQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWE 657
+ + EP +W+A+LSA + E R+A + ++ P + YV +SNMY+ A +W
Sbjct: 610 EGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWA 669
Query: 658 DAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAG 717
+ A +RK MK G++KEPG SW+E VH F HP I ++ + + AG
Sbjct: 670 NVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAG 729
Query: 718 YVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGA-PIRIFKNLRVCGDCHTAM 776
YVPD N L ++++E K+ L HSE+LA+A+GL+ +P I I KNLR+C DCH+AM
Sbjct: 730 YVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAM 789
Query: 777 KYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
K IS++ R +++RD NRFHHF AG CSCGD+W
Sbjct: 790 KVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 184/380 (48%), Gaps = 34/380 (8%)
Query: 46 FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
++ G++ +A ++F +M D W+ MIA + +G F N
Sbjct: 292 YTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNG-------------FCN-------- 330
Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
EA +LF +M+ P+++TL ++L C++ GEQ HG +K FD
Sbjct: 331 ----------EAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFD 380
Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
L+ +V L+D+YAKC+ + A LF KN V+W T+I GY G G KA FR+
Sbjct: 381 LDIYVSNALIDVYAKCEKMDTAVKLFAEL-SSKNEVSWNTVIVGYENLGEGGKAFSMFRE 439
Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
V + TF S L ACA++++ D G QVHG + + V V ++LIDMYAKCGD
Sbjct: 440 ALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGD 499
Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN- 344
+ A+ + E + SWN++I G++ G ++AL + M RD K + T+ VL+
Sbjct: 500 IKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSG 559
Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVI 403
C + + + S+I G E ++ + + G LD A ++ + + V+
Sbjct: 560 CSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVM 619
Query: 404 SWTSLITGCAYHGSYEEALK 423
W ++++ + E A +
Sbjct: 620 IWRAMLSASMNQNNEEFARR 639
Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 157/325 (48%), Gaps = 6/325 (1%)
Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
D + G++S+ + ++L C + +H IL G +++ + L++ Y K G
Sbjct: 41 DSIIPGLDSH--AYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAG 98
Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
A L + N VS+ ++ G+A Q + + L+ ++H +++ + S L
Sbjct: 99 FDKDALNLFDEMPERNNVSFVTLAQGYACQ----DPIGLYSRLHREGHELNPHVFTSFLK 154
Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
F S +HS IVK G++ FV ALI+ Y+ G++D A VF + KD++
Sbjct: 155 LFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVV 214
Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
W +++ +G +E++LK S MR++G P++ + L A L +F + VH L
Sbjct: 215 WAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQIL 274
Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ 524
K+ V L+ +Y + G ++DA +VF+ M DV+ W+ +I QNG EA+
Sbjct: 275 KTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVD 334
Query: 525 FYDQMLARGTKPDYITFVGLLFACS 549
+ +M P+ T +L C+
Sbjct: 335 LFIRMREAFVVPNEFTLSSILNGCA 359
Score = 93.2 bits (230), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 142/336 (42%), Gaps = 42/336 (12%)
Query: 39 LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKN 97
++ AL+D ++ ++D A +LF ++S ++ +WNT+I Y N G E K
Sbjct: 385 VSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLG---EGGK--------- 432
Query: 98 FFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHG 157
AF +F + ++ T + L C+ + G Q HG
Sbjct: 433 -------------------AFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHG 473
Query: 158 YAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGF 217
AIKT V L+DMYAKC I A+ +F + + +W +I+GYS +G G
Sbjct: 474 LAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEM-ETIDVASWNALISGYSTHGLGR 532
Query: 218 KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV-HGCILSSGFEANVYVQSAL 276
+A+ M+ + N TF +L+ C+ D G + I G E + + +
Sbjct: 533 QALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCM 592
Query: 277 IDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMIVGFARQG---FHKEALSLFKKMHARDI 332
+ + + G LD A +L+E + V W +M+ Q F + + K++ +
Sbjct: 593 VRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPK-- 650
Query: 333 KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFE 368
D+ TY V N +A N S+ + + G +
Sbjct: 651 --DEATYVLVSNMYAGAKQWANVASIRKSMKEMGVK 684
Score = 41.2 bits (95), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 76/189 (40%), Gaps = 8/189 (4%)
Query: 426 SDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKC 485
SD I G+ D ++L C + + +H LK G C L N L+ Y K
Sbjct: 40 SDSIIPGL--DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKA 97
Query: 486 GCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLL 545
G DA +FD M R+ +++ L AQ ++ + Y ++ G + + F L
Sbjct: 98 GFDKDALNLFDEMPERNNVSFVTL----AQGYACQDPIGLYSRLHREGHELNPHVFTSFL 153
Query: 546 FACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPD 605
AE W + K+ G A +I+ G + A+ + + ++ + D
Sbjct: 154 KLFVSLDKAEICPWLHSPIVKL-GYDSNAFVGAALINAYSVCGSVDSARTVFEGILCK-D 211
Query: 606 ATVWKALLS 614
VW ++S
Sbjct: 212 IVVWAGIVS 220
Score = 41.2 bits (95), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 5/130 (3%)
Query: 31 NSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF 90
N+ K + N + ++ G+I A +F +M D +WN +I+ Y+ G R+A ++
Sbjct: 479 NNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRIL 538
Query: 91 NETPFK----NFFTWSSLIYGYSNYGLDIEAFELFWQM-QLEGYRPSQYTLDNVLRLCSL 145
+ + N T+ ++ G SN GL + E F M + G P ++RL
Sbjct: 539 DIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGR 598
Query: 146 KGLLQRGEQF 155
G L + +
Sbjct: 599 SGQLDKAMKL 608
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 486 bits (1251), Expect = e-136, Method: Compositional matrix adjust.
Identities = 242/585 (41%), Positives = 364/585 (62%), Gaps = 1/585 (0%)
Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
D+ + +++ + ++L C G VH IL S F ++ + + L++MYAKCG
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
L+ AR++ E + V+W ++I G+++ +AL F +M ++FT SV+
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169
Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
A+ +H VK GF+ V +AL+D+Y + G +D A +VF+ ++ ++ +S
Sbjct: 170 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229
Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFL 464
W +LI G A E+AL+ F M G P H +S+ AC+ LE G+ VHA +
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 289
Query: 465 KSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQ 524
KSG N+L+ +YAK G I+DA ++FD + RDV++W +L+ AQ+G GKEA+
Sbjct: 290 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVW 349
Query: 525 FYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLL 584
++++M G +P+ I+F+ +L ACSH+GL + Y+E M K GI P HY ++DLL
Sbjct: 350 WFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLL 408
Query: 585 GRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYV 644
GR+G L A +++M EP A +WKALL+ACR+H + ELG AA ++FEL+P + P+V
Sbjct: 409 GRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHV 468
Query: 645 QLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYS 704
L N+Y++ G+W DAARVRK MK G++KEP CSWVE + +H+F++ D HP R +I
Sbjct: 469 ILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIAR 528
Query: 705 KIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFK 764
K +E++ IKE GYVPD + + +V+++ +E+ L YHSEK+A+AF LL P G+ I I K
Sbjct: 529 KWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKK 588
Query: 765 NLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
N+RVCGDCHTA+K S V R II+RD+NRFHHFK GNCSC DYW
Sbjct: 589 NIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 222 bits (565), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/391 (33%), Positives = 215/391 (54%), Gaps = 4/391 (1%)
Query: 126 LEG-YRPSQYTLDN-VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
LEG Y P+ N +L+ C++ LL +G H + +++ F + + L++MYAKC
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
+ EA +F+ P ++ V WTT+I+GYSQ+ A+ F M G N+FT S++
Sbjct: 111 LEEARKVFEKMPQ-RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169
Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
A AA G Q+HG + GF++NV+V SAL+D+Y + G +D A+ + + E N+VS
Sbjct: 170 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229
Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
WN++I G AR+ ++AL LF+ M + F+Y S+ +S L K VH+ ++
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 289
Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
K+G + F N L+DMYAK G++ A +F+ + +DV+SW SL+T A HG +EA+
Sbjct: 290 KSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVW 349
Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
+F +MR GI P+ + S+L+AC+ +L+ G + + K G ++V +
Sbjct: 350 WFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLG 409
Query: 484 KCGCINDANRVFDSMHTRDVIT-WTALIMGC 513
+ G +N A R + M W AL+ C
Sbjct: 410 RAGDLNRALRFIEEMPIEPTAAIWKALLNAC 440
Score = 192 bits (489), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 207/383 (54%), Gaps = 12/383 (3%)
Query: 71 NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
NT++ YA G L EA+K+F + P ++F TW++LI GYS + +A F QM GY
Sbjct: 99 NTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYS 158
Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
P+++TL +V++ + + G Q HG+ +K FD N V + L+D+Y + + +A+ +
Sbjct: 159 PNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLV 218
Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
F + +N V+W +I G+++ KA+E F+ M +G + F++ S+ AC++
Sbjct: 219 FDAL-ESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGF 277
Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
+ G VH ++ SG + + + L+DMYAK G + AR++ + + VSWNS++
Sbjct: 278 LEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTA 337
Query: 311 FARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF--E 368
+A+ GF KEA+ F++M I+ ++ ++ SVL + + L+ + L+ K G E
Sbjct: 338 YAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPE 397
Query: 369 GYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEALKYFSD 427
+ +V ++D+ + G+L+ A M + + W +L+ C H + E L ++
Sbjct: 398 AWHYVT--VVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE--LGAYAA 453
Query: 428 MRISGICPD----HVVVSSILSA 446
+ + PD HV++ +I ++
Sbjct: 454 EHVFELDPDDPGPHVILYNIYAS 476
Score = 84.0 bits (206), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 28/217 (12%)
Query: 417 SYEEALKYFS----------DMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKS 466
S +E+LK+ S D+ S I D +++L C +L G+ VHA L+S
Sbjct: 30 SEDESLKFPSNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQS 89
Query: 467 GGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFY 526
+ + N+L+ +YAKCG + +A +VF+ M RD +TWT LI G +Q+ + +AL F+
Sbjct: 90 IFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFF 149
Query: 527 DQMLARGTKPDYITFVGLLFA--------CSHAGLAENARWYFESMDKVYGIKPGPDHYA 578
+QML G P+ T ++ A C H + F+S V +
Sbjct: 150 NQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV---------GS 200
Query: 579 CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
++DL R G + +A+ + D + D + W AL++
Sbjct: 201 ALLDLYTRYGLMDDAQLVFDALESRNDVS-WNALIAG 236
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%)
Query: 67 GFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQL 126
F NT++ YA SG + +A+K+F+ ++ +W+SL+ Y+ +G EA F +M+
Sbjct: 297 AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRR 356
Query: 127 EGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFE 186
G RP++ + +VL CS GLL G ++ K A+ +VD+ + +
Sbjct: 357 VGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNR 416
Query: 187 AEYLFKMFPDGKNHVAWTTMITG 209
A + P W ++
Sbjct: 417 ALRFIEEMPIEPTAAIWKALLNA 439
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 484 bits (1245), Expect = e-135, Method: Compositional matrix adjust.
Identities = 268/702 (38%), Positives = 400/702 (56%), Gaps = 47/702 (6%)
Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY--------LFKMFPDGKNH 200
LQ H IK + ++ L++ CI + +FK + N
Sbjct: 46 LQSLRIIHAQMIKIGLHNTNYALSKLIEF-----CILSPHFEGLPYAISVFKTIQE-PNL 99
Query: 201 VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
+ W TM G++ + A++ + M G+ N +TFP +L +CA A G Q+HG
Sbjct: 100 LIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGH 159
Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSE----------------------- 297
+L G + ++YV ++LI MY + G L+ A ++ + S
Sbjct: 160 VLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENA 219
Query: 298 --------IDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASN 349
+ + VSWN+MI G+A G +KEAL LFK M +++ D+ T +V++ A +
Sbjct: 220 QKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQS 279
Query: 350 IDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLI 409
+ + VH I GF + NALID+Y+K G L+ A +F + KDVISW +LI
Sbjct: 280 GSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLI 339
Query: 410 TGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK--SG 467
G + Y+EAL F +M SG P+ V + SIL ACA L ++ G+ +H K G
Sbjct: 340 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKG 399
Query: 468 GCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYD 527
++ S+ SL+ +YAKCG I A++VF+S+ + + +W A+I G A +G+ + +
Sbjct: 400 VTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFS 459
Query: 528 QMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRS 587
+M G +PD ITFVGLL ACSH+G+ + R F +M + Y + P +HY CMIDLLG S
Sbjct: 460 RMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHS 519
Query: 588 GKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLS 647
G EA+ +++ M EPD +W +LL AC++HG++ELGE A NL ++EP N YV LS
Sbjct: 520 GLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLS 579
Query: 648 NMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKID 707
N+Y++AG+W + A+ R L+ +G++K PGCS +E +S VH FI D+ HP +IY ++
Sbjct: 580 NIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLE 639
Query: 708 EIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLR 767
E+ +L+++AG+VPD + L +EEE KE L +HSEKLA+AFGL++ G + I KNLR
Sbjct: 640 EMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLR 699
Query: 768 VCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
VC +CH A K IS +Y R II RD RFHHF+ G CSC DYW
Sbjct: 700 VCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 203 bits (517), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 204/409 (49%), Gaps = 32/409 (7%)
Query: 83 LREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRL 142
L A +F N W+++ G++ + A +L+ M G P+ YT VL+
Sbjct: 84 LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 143
Query: 143 CSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG----- 197
C+ + G+Q HG+ +K DL+ +V T L+ MY + + +A +F P
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY 203
Query: 198 -------------------------KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
K+ V+W MI+GY++ G +A+E F+DM V
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263
Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
++ T ++++ACA + + G QVH I GF +N+ + +ALID+Y+KCG+L++A L
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGL 323
Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
E + +SWN++I G+ +KEAL LF++M +D T S+L A +
Sbjct: 324 FERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 383
Query: 353 NNAKSVHSLIVK--TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
+ + +H I K G + +LIDMYAK G+++ A VFN + K + SW ++I
Sbjct: 384 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIF 443
Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV 459
G A HG + + FS MR GI PD + +LSAC+ +L+ G+ +
Sbjct: 444 GFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
Score = 189 bits (480), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 130/446 (29%), Positives = 222/446 (49%), Gaps = 23/446 (5%)
Query: 46 FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
+ +G +++A ++F+K RD ++ +I YA+ G + A+KLF+E P K+ +W+++I
Sbjct: 179 YVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMI 238
Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
GY+ G EA ELF M RP + T+ V+ C+ G ++ G Q H + F
Sbjct: 239 SGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFG 298
Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
N +V L+D+Y+KC + A LF+ P K+ ++W T+I GY+ +A+ F++
Sbjct: 299 SNLKIVNALIDLYSKCGELETACGLFERLP-YKDVISWNTLIGGYTHMNLYKEALLLFQE 357
Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS--SGFEANVYVQSALIDMYAKC 283
M G N T SIL ACA + A D G +H I G ++++LIDMYAKC
Sbjct: 358 MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKC 417
Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
GD+++A ++ + SWN+MI GFA G + LF +M I+ DD T+ +L
Sbjct: 418 GDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLL 477
Query: 344 NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN-----ALIDMYAKQGNLD-CAFMVFNLM 397
+ + + L+ + I +T + YK +ID+ G M+ +
Sbjct: 478 SACSHSGMLDLGRH----IFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMME 533
Query: 398 QDKDVISWTSLITGCAYHGSYEEALKYFSDM-RISGICP-DHVVVSSILSACAELTVLEF 455
+ D + W SL+ C HG+ E + ++ +I P +V++S+I ++ +
Sbjct: 534 MEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEV-- 591
Query: 456 GQQVHAVFLKSG-----GCSSLSVDN 476
+ A+ G GCSS+ +D+
Sbjct: 592 -AKTRALLNDKGMKKVPGCSSIEIDS 616
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 479 bits (1232), Expect = e-134, Method: Compositional matrix adjust.
Identities = 253/664 (38%), Positives = 389/664 (58%), Gaps = 4/664 (0%)
Query: 149 LQRGEQFHGYAIKTC-FDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
++ G H +KT F+ L++MY+K A + ++ P +N V+WT++I
Sbjct: 22 MRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTP-ARNVVSWTSLI 80
Query: 208 TGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFE 267
+G +QNG+ A+ F +MR EGV N FTFP A A++ G Q+H + G
Sbjct: 81 SGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRI 140
Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKM 327
+V+V + DMY K D AR+L + N +WN+ I G +EA+ F +
Sbjct: 141 LDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEF 200
Query: 328 HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNL 387
D + T+ + LN + + LN +H L++++GF+ V N LID Y K +
Sbjct: 201 RRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQI 260
Query: 388 DCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSAC 447
+ ++F M K+ +SW SL+ + E+A + R + ++SS+LSAC
Sbjct: 261 RSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSAC 320
Query: 448 AELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWT 507
A + LE G+ +HA +K+ ++ V ++LV +Y KCGCI D+ + FD M ++++T
Sbjct: 321 AGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRN 380
Query: 508 ALIMGCAQNGKGKEALQFYDQMLARG--TKPDYITFVGLLFACSHAGLAENARWYFESMD 565
+LI G A G+ AL +++M RG P+Y+TFV LL ACS AG EN F+SM
Sbjct: 381 SLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMR 440
Query: 566 KVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELG 625
YGI+PG +HY+C++D+LGR+G + A + +M +P +VW AL +ACR+HG +LG
Sbjct: 441 STYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLG 500
Query: 626 ERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQ 685
AA NLF+L+P ++ +V LSN ++ AG+W +A VR+ +K GI+K G SW+ +Q
Sbjct: 501 LLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQ 560
Query: 686 VHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKL 745
VH F ++DR H L +I + + ++ ++ AGY PD+ +L+++EEE K +++HSEKL
Sbjct: 561 VHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKL 620
Query: 746 AVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSC 805
A+AFGLL+LP PIRI KNLR+CGDCH+ K++S R II+RD+NRFH FK G CSC
Sbjct: 621 ALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSC 680
Query: 806 GDYW 809
DYW
Sbjct: 681 KDYW 684
Score = 199 bits (506), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 218/460 (47%), Gaps = 5/460 (1%)
Query: 68 FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
F N +I Y+ A+ + TP +N +W+SLI G + G A F++M+ E
Sbjct: 43 FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRRE 102
Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
G P+ +T + + L G+Q H A+K L+ FV DMY K + +A
Sbjct: 103 GVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDA 162
Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
LF P+ +N W I+ +G +AIE F + R N TF + L AC+
Sbjct: 163 RKLFDEIPE-RNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSD 221
Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
+ G Q+HG +L SGF+ +V V + LID Y KC + S+ + N VSW S+
Sbjct: 222 WLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSL 281
Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
+ + + ++A L+ + ++ DF SVL+ A L +S+H+ VK
Sbjct: 282 VAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACV 341
Query: 368 EGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSD 427
E FV +AL+DMY K G ++ + F+ M +K++++ SLI G A+ G + AL F +
Sbjct: 342 ERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEE 401
Query: 428 M--RISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL-VYAK 484
M R G P+++ S+LSAC+ +E G ++ + G + S ++ + +
Sbjct: 402 MAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGR 461
Query: 485 CGCINDANRVFDSMHTRDVIT-WTALIMGCAQNGKGKEAL 523
G + A M + I+ W AL C +GK + L
Sbjct: 462 AGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGL 501
Score = 166 bits (420), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 127/417 (30%), Positives = 204/417 (48%), Gaps = 20/417 (4%)
Query: 82 RLRE-AKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVL 140
RLR+ A+KLF+E P +N TW++ I G EA E F + + P+ T L
Sbjct: 157 RLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFL 216
Query: 141 RLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNH 200
CS L G Q HG +++ FD + V GL+D Y KCK I +E +F KN
Sbjct: 217 NACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEM-GTKNA 275
Query: 201 VAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGC 260
V+W +++ Y QN KA + R + VE++ F S+L+ACA ++ + G +H
Sbjct: 276 VSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAH 335
Query: 261 ILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEA 320
+ + E ++V SAL+DMY KCG ++ + + + N V+ NS+I G+A QG A
Sbjct: 336 AVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMA 395
Query: 321 LSLFKKMHARDI--KIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
L+LF++M R + T+ S+L+ C + N K S+ G E + +
Sbjct: 396 LALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCI 455
Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYEEAL-----KYFSDMRIS 431
+DM + G ++ A+ M + IS W +L C HG + L + D + S
Sbjct: 456 VDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDS 515
Query: 432 GICPDHVVVSSILSAC---AELTVLEFGQQVHAVFLKSG-GCSSLSVDNSLVLVYAK 484
G +HV++S+ +A AE + +++ V +K G G S ++V N + AK
Sbjct: 516 G---NHVLLSNTFAAAGRWAEANTVR--EELKGVGIKKGAGYSWITVKNQVHAFQAK 567
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 121/248 (48%), Gaps = 5/248 (2%)
Query: 64 DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
D D N +I Y ++R ++ +F E KN +W SL+ Y D +A L+ +
Sbjct: 241 DTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLR 300
Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
+ + S + + +VL C+ L+ G H +A+K C + FV + LVDMY KC C
Sbjct: 301 SRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGC 360
Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM--RVEGVESNQFTFPSI 241
I ++E F P+ KN V ++I GY+ G A+ F +M R G N TF S+
Sbjct: 361 IEDSEQAFDEMPE-KNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSL 419
Query: 242 LTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDN 300
L+AC+ A + G ++ + S+ G E S ++DM + G ++ A ++ I
Sbjct: 420 LSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQP 479
Query: 301 EVS-WNSM 307
+S W ++
Sbjct: 480 TISVWGAL 487
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 18/196 (9%)
Query: 20 IGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYA 78
+G + + H V V+ + ALVD + G I+++ Q F++M +++ T N++I YA
Sbjct: 328 LGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYA 387
Query: 79 NSGRLREAKKLFNET------PFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRP 131
+ G++ A LF E P N+ T+ SL+ S G ++F M+ G P
Sbjct: 388 HQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEP 447
Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVD----MYAKCKC-IFE 186
++ + G+++R +F IK V G + M+ K + +
Sbjct: 448 GAEHYSCIVDMLGRAGMVERAYEF----IKKMPIQPTISVWGALQNACRMHGKPQLGLLA 503
Query: 187 AEYLFKMFP-DGKNHV 201
AE LFK+ P D NHV
Sbjct: 504 AENLFKLDPKDSGNHV 519
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 479 bits (1232), Expect = e-134, Method: Compositional matrix adjust.
Identities = 264/652 (40%), Positives = 385/652 (59%), Gaps = 12/652 (1%)
Query: 167 NAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM 226
N F +V YAK I A LF P + V++ T+I+GY+ F A+ F+ M
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQ-PDTVSYNTLISGYADARETFAAMVLFKRM 131
Query: 227 RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDL 286
R G E + FT ++ AC D Q+H +S GF++ V +A + Y+K G L
Sbjct: 132 RKLGFEVDGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLL 189
Query: 287 DSARRLL-EYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
A + E+ +EVSWNSMIV + + +AL+L+K+M + KID FT SVLN
Sbjct: 190 REAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA 249
Query: 346 FASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF---MVFNLMQDKDV 402
S L + H ++K GF V + LID Y+K G D + VF + D+
Sbjct: 250 LTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDL 309
Query: 403 ISWTSLITGCAYHGSY-EEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHA 461
+ W ++I+G + + EEA+K F M+ G PD + SAC+ L+ +Q+H
Sbjct: 310 VVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHG 369
Query: 462 VFLKSGGCSS-LSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGK 520
+ +KS S+ +SV+N+L+ +Y K G + DA VFD M + +++ +I G AQ+G G
Sbjct: 370 LAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGT 429
Query: 521 EALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACM 580
EAL Y +ML G P+ ITFV +L AC+H G + + YF +M + + I+P +HY+CM
Sbjct: 430 EALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCM 489
Query: 581 IDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNA 640
IDLLGR+GKL EA+ +D M +P + W ALL ACR H ++ L ERAAN L ++P+ A
Sbjct: 490 IDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAA 549
Query: 641 MPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRT 700
PYV L+NMY+ A KWE+ A VRK M+ + IRK+PGCSW+E + H+F++ED HP+
Sbjct: 550 TPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIR 609
Query: 701 DIYSKIDEIMLLIKEAGYVPDMNFAL---HNVEEEGKEIGLAYHSEKLAVAFGLLTLPQG 757
++ ++E+M +K+ GYV D +A+ E +E+ L +HSEKLAVAFGL++ G
Sbjct: 610 EVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDG 669
Query: 758 APIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
+ + KNLR+CGDCH A+K++SAV R II+RD+ RFH FK G CSCGDYW
Sbjct: 670 EELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 211 bits (537), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 144/523 (27%), Positives = 263/523 (50%), Gaps = 10/523 (1%)
Query: 2 FKLDFKILNFSLRCRSKIIGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFE 60
FK +L S+ R G + + V + V ++ L+ V+ +S G + A F
Sbjct: 8 FKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFY 67
Query: 61 KMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFEL 120
+ + F++N ++ AYA ++ A++LF+E P + ++++LI GY++ A L
Sbjct: 68 STEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVL 127
Query: 121 FWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAK 180
F +M+ G+ +TL ++ C + L + Q H +++ FD + V V Y+K
Sbjct: 128 FKRMRKLGFEVDGFTLSGLIAACCDRVDLIK--QLHCFSVSGGFDSYSSVNNAFVTYYSK 185
Query: 181 CKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPS 240
+ EA +F + ++ V+W +MI Y Q+ G KA+ +++M +G + + FT S
Sbjct: 186 GGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLAS 245
Query: 241 ILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS---ARRLLEYSE 297
+L A ++ G Q HG ++ +GF N +V S LID Y+KCG D + ++ +
Sbjct: 246 VLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEIL 305
Query: 298 IDNEVSWNSMIVGFA-RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAK 356
+ V WN+MI G++ + +EA+ F++M + DD ++ V + ++ + K
Sbjct: 306 SPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCK 365
Query: 357 SVHSLIVKTGFEGYKF-VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
+H L +K+ + VNNALI +Y K GNL A VF+ M + + +S+ +I G A H
Sbjct: 366 QIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQH 425
Query: 416 GSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD 475
G EAL + M SGI P+ + ++LSACA ++ GQ+ ++ +
Sbjct: 426 GHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEH 485
Query: 476 NS-LVLVYAKCGCINDANRVFDSM-HTRDVITWTALIMGCAQN 516
S ++ + + G + +A R D+M + + W AL+ C ++
Sbjct: 486 YSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKH 528
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 443 ILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD 502
+L + AE + G+ +HA+++KS SS + N V +Y+KCG ++ A F S +
Sbjct: 15 LLKSVAERDLFT-GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPN 73
Query: 503 VITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFE 562
V ++ ++ A++ K A Q +D++ +PD +++ L+ + A A F+
Sbjct: 74 VFSYNVIVKAYAKDSKIHIARQLFDEI----PQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 563 SMDKV 567
M K+
Sbjct: 130 RMRKL 134
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 478 bits (1229), Expect = e-133, Method: Compositional matrix adjust.
Identities = 268/723 (37%), Positives = 399/723 (55%), Gaps = 49/723 (6%)
Query: 131 PSQYTLDN--------VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
P+Q T +N + R SL+ L +Q HG+ I+T + + + L M A
Sbjct: 21 PNQPTTNNERSRHISLIERCVSLRQL----KQTHGHMIRTGTFSDPYSASKLFAM-AALS 75
Query: 183 CIFEAEYLFKMFPD--GKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFP 239
EY K+F + N AW T+I Y+ +I F DM E N++TFP
Sbjct: 76 SFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFP 135
Query: 240 SILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEID 299
++ A A VS+ G +HG + S ++V+V ++LI Y CGDLDSA ++ +
Sbjct: 136 FLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK 195
Query: 300 NEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVH 359
+ VSWNSMI GF ++G +AL LFKKM + D+K T VL+ A +L + V
Sbjct: 196 DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVC 255
Query: 360 SLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYE 419
S I + + NA++DMY K G+++ A +F+ M++KD ++WT+++ G A YE
Sbjct: 256 SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYE 315
Query: 420 -------------------------------EALKYFSDMRIS-GICPDHVVVSSILSAC 447
EAL F ++++ + + + + S LSAC
Sbjct: 316 AAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSAC 375
Query: 448 AELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWT 507
A++ LE G+ +H+ K G + V ++L+ +Y+KCG + + VF+S+ RDV W+
Sbjct: 376 AQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWS 435
Query: 508 ALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKV 567
A+I G A +G G EA+ + +M KP+ +TF + ACSH GL + A F M+
Sbjct: 436 AMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESN 495
Query: 568 YGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGER 627
YGI P HYAC++D+LGRSG L +A ++ M P +VW ALL AC++H +L L E
Sbjct: 496 YGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEM 555
Query: 628 AANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVH 687
A L ELEP N +V LSN+Y+ GKWE+ + +RK M+ G++KEPGCS +E + +H
Sbjct: 556 ACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIH 615
Query: 688 IFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEG-KEIGLAYHSEKLA 746
F+S D HP+ +Y K+ E+M +K GY P+++ L +EEE KE L HSEKLA
Sbjct: 616 EFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLA 675
Query: 747 VAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCG 806
+ +GL++ IR+ KNLRVCGDCH+ K IS +Y R II+RD RFHHF+ G CSC
Sbjct: 676 ICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCN 735
Query: 807 DYW 809
D+W
Sbjct: 736 DFW 738
Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 130/475 (27%), Positives = 230/475 (48%), Gaps = 36/475 (7%)
Query: 74 IAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGY-RPS 132
+AA ++ L A+K+F+E P N F W++LI Y++ + + F M E P+
Sbjct: 71 MAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPN 130
Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
+YT +++ + L G+ HG A+K+ + FV L+ Y C + A +F
Sbjct: 131 KYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFT 190
Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
+ K+ V+W +MI G+ Q G KA+E F+ M E V+++ T +L+ACA + +
Sbjct: 191 TIKE-KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLE 249
Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
FG QV I + N+ + +A++DMY KCG ++ A+RL + E + V+W +M+ G+A
Sbjct: 250 FGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYA 309
Query: 313 -------------------------------RQGFHKEALSLFKKMH-ARDIKIDDFTYP 340
+ G EAL +F ++ +++K++ T
Sbjct: 310 ISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLV 369
Query: 341 SVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK 400
S L+ A L + +HS I K G V +ALI MY+K G+L+ + VFN ++ +
Sbjct: 370 STLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKR 429
Query: 401 DVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQV- 459
DV W+++I G A HG EA+ F M+ + + P+ V +++ AC+ +++ + +
Sbjct: 430 DVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLF 489
Query: 460 HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVIT-WTALIMGC 513
H + G +V V + G + A + ++M + W AL+ C
Sbjct: 490 HQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGAC 544
Score = 169 bits (428), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 130/451 (28%), Positives = 212/451 (47%), Gaps = 45/451 (9%)
Query: 66 DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
D F N++I Y + G L A K+F K+ +W+S+I G+ G +A ELF +M+
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
E + S T+ VL C+ L+ G Q Y + ++N + ++DMY KC I
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 284
Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYS-------------------------------QNG 214
+A+ LF + K++V WTTM+ GY+ QNG
Sbjct: 285 DAKRLFDAMEE-KDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNG 343
Query: 215 YGFKAIECFRDMRVE-GVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ 273
+A+ F +++++ ++ NQ T S L+ACA V A + G +H I G N +V
Sbjct: 344 KPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVT 403
Query: 274 SALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIK 333
SALI MY+KCGDL+ +R + E + W++MI G A G EA+ +F KM ++K
Sbjct: 404 SALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVK 463
Query: 334 IDDFTYPSVLNCFASNIDL-NNAKSV-HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
+ T+ +V C S+ L + A+S+ H + G + ++D+ + G L+ A
Sbjct: 464 PNGVTFTNVF-CACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAV 522
Query: 392 MVFNLMQDKDVIS-WTSLITGCAYHGSYEEALKYFSDMRISGICPD----HVVVSSILSA 446
M S W +L+ C H + L + R+ + P HV++S+I +
Sbjct: 523 KFIEAMPIPPSTSVWGALLGACKIHANLN--LAEMACTRLLELEPRNDGAHVLLSNIYAK 580
Query: 447 CAEL-TVLEFGQQVHAVFL-KSGGCSSLSVD 475
+ V E + + L K GCSS+ +D
Sbjct: 581 LGKWENVSELRKHMRVTGLKKEPGCSSIEID 611
Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 139/282 (49%), Gaps = 5/282 (1%)
Query: 31 NSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKL 89
N V L A++D ++ G I++A +LF+ M ++D TW TM+ YA S A+++
Sbjct: 261 NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREV 320
Query: 90 FNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE-GYRPSQYTLDNVLRLCSLKGL 148
N P K+ W++LI Y G EA +F ++QL+ + +Q TL + L C+ G
Sbjct: 321 LNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGA 380
Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
L+ G H Y K +N V + L+ MY+KC + ++ +F + ++ W+ MI
Sbjct: 381 LELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV-EKRDVFVWSAMIG 439
Query: 209 GYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV-HGCILSSGFE 267
G + +G G +A++ F M+ V+ N TF ++ AC+ D + H + G
Sbjct: 440 GLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIV 499
Query: 268 ANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS-WNSMI 308
+ ++D+ + G L+ A + +E I S W +++
Sbjct: 500 PEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL 541
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 473 bits (1217), Expect = e-132, Method: Compositional matrix adjust.
Identities = 234/646 (36%), Positives = 379/646 (58%), Gaps = 3/646 (0%)
Query: 66 DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
D N +++ Y G LR+A+++F+ P +N +++S+I GYS G EA L+ +M
Sbjct: 101 DTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKML 160
Query: 126 LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIF 185
E P Q+ ++++ C+ + G+Q H IK + L+ MY + +
Sbjct: 161 QEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMS 220
Query: 186 EAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV-ESNQFTFPSILTA 244
+A +F P K+ ++W+++I G+SQ G+ F+A+ ++M GV N++ F S L A
Sbjct: 221 DASRVFYGIP-MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKA 279
Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
C+++ D+G+Q+HG + S N +L DMYA+CG L+SARR+ + E + SW
Sbjct: 280 CSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASW 339
Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
N +I G A G+ EA+S+F +M + D + S+L + L+ +HS I+K
Sbjct: 340 NVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIK 399
Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVF-NLMQDKDVISWTSLITGCAYHGSYEEALK 423
GF V N+L+ MY +L C F +F + + D +SW +++T C H E L+
Sbjct: 400 WGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLR 459
Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
F M +S PDH+ + ++L C E++ L+ G QVH LK+G + N L+ +YA
Sbjct: 460 LFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYA 519
Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVG 543
KCG + A R+FDSM RDV++W+ LI+G AQ+G G+EAL + +M + G +P+++TFVG
Sbjct: 520 KCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVG 579
Query: 544 LLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGE 603
+L ACSH GL E + +M +GI P +H +C++DLL R+G+L EA+ +D+M E
Sbjct: 580 VLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLE 639
Query: 604 PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVR 663
PD VWK LLSAC+ G++ L ++AA N+ +++P N+ +V L +M++++G WE+AA +R
Sbjct: 640 PDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLR 699
Query: 664 KLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEI 709
MK ++K PG SW+E ++HIF +ED HP R DIY+ + I
Sbjct: 700 SSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNI 745
Score = 231 bits (589), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 164/569 (28%), Positives = 277/569 (48%), Gaps = 31/569 (5%)
Query: 121 FWQMQLEGYRPSQYTLDNVLRL---------CSLKGLLQRGEQFHGYAIKTCFDLNAFVV 171
F++ LE + +Q +RL CS L +G + H + + + + +
Sbjct: 46 FYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILN 105
Query: 172 TGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGV 231
++ MY KC + +A +F P+ +N V++T++ITGYSQNG G +AI + M E +
Sbjct: 106 NHILSMYGKCGSLRDAREVFDFMPE-RNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDL 164
Query: 232 ESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARR 291
+QF F SI+ ACA+ S G Q+H ++ +++ Q+ALI MY + + A R
Sbjct: 165 VPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASR 224
Query: 292 LLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI-KIDDFTYPSVLNCFASNI 350
+ + + +SW+S+I GF++ GF EALS K+M + + +++ + S L +S +
Sbjct: 225 VFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLL 284
Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
+ +H L +K+ G +L DMYA+ G L+ A VF+ ++ D SW +I
Sbjct: 285 RPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIA 344
Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
G A +G +EA+ FS MR SG PD + + S+L A + L G Q+H+ +K G +
Sbjct: 345 GLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLA 404
Query: 471 SLSVDNSLVLVYAKCGCINDANRVF-DSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM 529
L+V NSL+ +Y C + +F D + D ++W ++ C Q+ + E L+ + M
Sbjct: 405 DLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLM 464
Query: 530 LARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPG--PDHYA--CMIDLLG 585
L +PD+IT LL C E + S Y +K G P+ + +ID+
Sbjct: 465 LVSECEPDHITMGNLLRGC-----VEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYA 519
Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL-----EPMNA 640
+ G L +A+ + D M D W L+ G GE A E+ EP N
Sbjct: 520 KCGSLGQARRIFDSM-DNRDVVSWSTLIVGYAQSG---FGEEALILFKEMKSAGIEP-NH 574
Query: 641 MPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
+ +V + S G E+ ++ M++
Sbjct: 575 VTFVGVLTACSHVGLVEEGLKLYATMQTE 603
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 136/519 (26%), Positives = 246/519 (47%), Gaps = 55/519 (10%)
Query: 17 SKIIGPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIA 75
S+I G + GN++ S L D ++ G ++ A ++F+++ D +WN +IA
Sbjct: 290 SQIHGLCIKSELAGNAIAGCS-----LCDMYARCGFLNSARRVFDQIERPDTASWNVIIA 344
Query: 76 AYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYT 135
AN+ GY++ EA +F QM+ G+ P +
Sbjct: 345 GLANN--------------------------GYAD-----EAVSVFSQMRSSGFIPDAIS 373
Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
L ++L + L +G Q H Y IK F + V L+ MY C ++ LF+ F
Sbjct: 374 LRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFR 433
Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGA 255
+ + V+W T++T Q+ + + F+ M V E + T ++L C +S+ G+
Sbjct: 434 NNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGS 493
Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
QVH L +G ++++ LIDMYAKCG L ARR+ + + + VSW+++IVG+A+ G
Sbjct: 494 QVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSG 553
Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVN 374
F +EAL LFK+M + I+ + T+ VL C + K ++ + G K
Sbjct: 554 FGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHC 613
Query: 375 NALIDMYAKQGNLDCAFMVFNLMQ-DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
+ ++D+ A+ G L+ A + M+ + DV+ W +L++ C G+ A K + I I
Sbjct: 614 SCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAEN--ILKI 671
Query: 434 CP----DHVVVSSILSACA---ELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCG 486
P HV++ S+ ++ +L + H V K G S + +++ + + +A+
Sbjct: 672 DPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDV-KKIPGQSWIEIEDKIHIFFAEDI 730
Query: 487 CINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
+ + ++ +H W+ ++ C N + K+ LQF
Sbjct: 731 FHPERDDIYTVLHN----IWSQMLDEC--NPQHKKRLQF 763
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 162/331 (48%), Gaps = 12/331 (3%)
Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFK-KMHARDIKIDDFTYPSVLNCFASNIDLNN 354
S I E N I + F++EAL F KI TY S++ +S+ L
Sbjct: 26 STIKTEELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQ 85
Query: 355 AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAY 414
+ +H I+ + + +NN ++ MY K G+L A VF+ M +++++S+TS+ITG +
Sbjct: 86 GRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQ 145
Query: 415 HGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
+G EA++ + M + PD SI+ ACA + + G+Q+HA +K S L
Sbjct: 146 NGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIA 205
Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
N+L+ +Y + ++DA+RVF + +D+I+W+++I G +Q G EAL +ML+ G
Sbjct: 206 QNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGV 265
Query: 535 -KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKP---GPDHYAC-MIDLLGRSGK 589
P+ F L ACS R + S IK G C + D+ R G
Sbjct: 266 FHPNEYIFGSSLKACSSL-----LRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGF 320
Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHG 620
L A+ + DQ + PD W +++ +G
Sbjct: 321 LNSARRVFDQ-IERPDTASWNVIIAGLANNG 350
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 471 bits (1213), Expect = e-132, Method: Compositional matrix adjust.
Identities = 254/738 (34%), Positives = 414/738 (56%), Gaps = 5/738 (0%)
Query: 71 NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM-QLEGY 129
N +A + G L +A +F + +N F+W+ L+ GY+ G EA L+ +M + G
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 130 RPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEY 189
+P YT VLR C L RG++ H + ++ ++L+ VV L+ MY KC + A
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
LF P ++ ++W MI+GY +NG + +E F MR V+ + T S+++AC +
Sbjct: 253 LFDRMPR-RDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
R G +H ++++GF ++ V ++L MY G A +L E + VSW +MI
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMIS 371
Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
G+ +A+ ++ M +K D+ T +VL+ A+ DL+ +H L +K
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431
Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
Y V N LI+MY+K +D A +F+ + K+VISWTS+I G + EAL + M+
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK 491
Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
++ + P+ + +++ L+ACA + L G+++HA L++G + N+L+ +Y +CG +N
Sbjct: 492 MT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMN 550
Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACS 549
A F+S +DV +W L+ G ++ G+G ++ +D+M+ +PD ITF+ LL CS
Sbjct: 551 TAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCS 609
Query: 550 HAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVW 609
+ + YF M+ YG+ P HYAC++DLLGR+G+L EA + +M PD VW
Sbjct: 610 KSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVW 668
Query: 610 KALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSR 669
ALL+ACR+H ++LGE +A ++FEL+ + Y+ L N+Y+ GKW + A+VR++MK
Sbjct: 669 GALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKEN 728
Query: 670 GIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNV 729
G+ + GCSWVE +VH F+S+D+ HP +I + ++ + E G + +
Sbjct: 729 GLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDE 788
Query: 730 EEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIIL 789
E ++ HSE+ A+AFGL+ G PI + KNL +C +CH +K+IS R I +
Sbjct: 789 TEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISV 848
Query: 790 RDSNRFHHFKAGNCSCGD 807
RD+ FHHFK G CSCGD
Sbjct: 849 RDAEHFHHFKDGECSCGD 866
Score = 218 bits (555), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 224/427 (52%), Gaps = 4/427 (0%)
Query: 105 IYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCF 164
++G G EA +L MQ + ++RLC K + G + + A+ +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECF- 223
L + + M+ + + +A Y+F + +N +W ++ GY++ GY F C
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSE-RNLFSWNVLVGGYAKQGY-FDEAMCLY 183
Query: 224 -RDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAK 282
R + V GV+ + +TFP +L C + G +VH ++ G+E ++ V +ALI MY K
Sbjct: 184 HRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVK 243
Query: 283 CGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSV 342
CGD+ SAR L + + +SWN+MI G+ G E L LF M + D T SV
Sbjct: 244 CGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSV 303
Query: 343 LNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDV 402
++ D + +H+ ++ TGF V N+L MY G+ A +F+ M+ KD+
Sbjct: 304 ISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDI 363
Query: 403 ISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAV 462
+SWT++I+G Y+ ++A+ + M + PD + V+++LSACA L L+ G ++H +
Sbjct: 364 VSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKL 423
Query: 463 FLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEA 522
+K+ S + V N+L+ +Y+KC CI+ A +F ++ ++VI+WT++I G N + EA
Sbjct: 424 AIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEA 483
Query: 523 LQFYDQM 529
L F QM
Sbjct: 484 LIFLRQM 490
Score = 185 bits (469), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 142/495 (28%), Positives = 226/495 (45%), Gaps = 36/495 (7%)
Query: 21 GPARYTHNVGNSVKPASDLNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYAN 79
G + H V + D+ AL+ + G++ A LF++M RD +WN MI+ Y
Sbjct: 215 GKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGY-- 272
Query: 80 SGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNV 139
F+N G+ E ELF+ M+ P TL +V
Sbjct: 273 ---------------FEN--------------GMCHEGLELFFAMRGLSVDPDLMTLTSV 303
Query: 140 LRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKN 199
+ C L G + G H Y I T F ++ V L MY EAE LF + K+
Sbjct: 304 ISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM-ERKD 362
Query: 200 HVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHG 259
V+WTTMI+GY N KAI+ +R M + V+ ++ T ++L+ACA + D G ++H
Sbjct: 363 IVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHK 422
Query: 260 CILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKE 319
+ + + V V + LI+MY+KC +D A + N +SW S+I G E
Sbjct: 423 LAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFE 482
Query: 320 ALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALID 379
AL ++M ++ + T + L A L K +H+ +++TG F+ NAL+D
Sbjct: 483 ALIFLRQMKM-TLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLD 541
Query: 380 MYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVV 439
MY + G ++ A+ FN Q KDV SW L+TG + G ++ F M S + PD +
Sbjct: 542 MYVRCGRMNTAWSQFN-SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEIT 600
Query: 440 VSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMH 499
S+L C++ ++ G + G +L +V + + G + +A++ M
Sbjct: 601 FISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMP 660
Query: 500 -TRDVITWTALIMGC 513
T D W AL+ C
Sbjct: 661 VTPDPAVWGALLNAC 675
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 471 bits (1211), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/659 (37%), Positives = 376/659 (57%), Gaps = 5/659 (0%)
Query: 152 GEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYS 211
G HG A+ D + + +V MY K + +A +F P+ K+ + W TMI+GY
Sbjct: 138 GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPE-KDTILWNTMISGYR 196
Query: 212 QNGYGFKAIECFRDMRVEG-VESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANV 270
+N ++I+ FRD+ E + T IL A A + G Q+H +G ++
Sbjct: 197 KNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHD 256
Query: 271 YVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR 330
YV + I +Y+KCG + L + V++N+MI G+ G + +LSLFK++
Sbjct: 257 YVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316
Query: 331 DIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCA 390
++ T S++ L ++H +K+ F + V+ AL +Y+K ++ A
Sbjct: 317 GARLRSSTLVSLVPVSG---HLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESA 373
Query: 391 FMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAEL 450
+F+ +K + SW ++I+G +G E+A+ F +M+ S P+ V ++ ILSACA+L
Sbjct: 374 RKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQL 433
Query: 451 TVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALI 510
L G+ VH + + SS+ V +L+ +YAKCG I +A R+FD M ++ +TW +I
Sbjct: 434 GALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMI 493
Query: 511 MGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGI 570
G +G+G+EAL + +ML G P +TF+ +L+ACSHAGL + F SM YG
Sbjct: 494 SGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGF 553
Query: 571 KPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAAN 630
+P HYACM+D+LGR+G L A ++ M EP ++VW+ LL ACR+H D L +
Sbjct: 554 EPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSE 613
Query: 631 NLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFI 690
LFEL+P N +V LSN++S + AA VR+ K R + K PG + +E H+F
Sbjct: 614 KLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFT 673
Query: 691 SEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFG 750
S D+ HP +IY K++++ ++EAGY P+ ALH+VEEE +E+ + HSE+LA+AFG
Sbjct: 674 SGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFG 733
Query: 751 LLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
L+ G IRI KNLRVC DCHT K IS + R I++RD+NRFHHFK G CSCGDYW
Sbjct: 734 LIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/491 (27%), Positives = 244/491 (49%), Gaps = 16/491 (3%)
Query: 33 VKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDG-----FTWNTMIAAYANSGRLREAK 87
+KP S + ++ D AG++ + DG + ++ Y R+ +A+
Sbjct: 115 LKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDAR 174
Query: 88 KLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG-YRPSQYTLDNVLRLCSLK 146
K+F+ P K+ W+++I GY + +E+ ++F + E R TL ++L +
Sbjct: 175 KVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAEL 234
Query: 147 GLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMF--PDGKNHVAWT 204
L+ G Q H A KT + +V+TG + +Y+KC I LF+ F PD VA+
Sbjct: 235 QELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDI---VAYN 291
Query: 205 TMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS 264
MI GY+ NG ++ F+++ + G T S++ + +HG L S
Sbjct: 292 AMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM---LIYAIHGYCLKS 348
Query: 265 GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLF 324
F ++ V +AL +Y+K +++SAR+L + S + SWN+MI G+ + G ++A+SLF
Sbjct: 349 NFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLF 408
Query: 325 KKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
++M + + T +L+ A L+ K VH L+ T FE +V+ ALI MYAK
Sbjct: 409 REMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKC 468
Query: 385 GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
G++ A +F+LM K+ ++W ++I+G HG +EAL F +M SGI P V +L
Sbjct: 469 GSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVL 528
Query: 445 SACAELTVLEFGQQV-HAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD- 502
AC+ +++ G ++ +++ + G S+ +V + + G + A + ++M
Sbjct: 529 YACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPG 588
Query: 503 VITWTALIMGC 513
W L+ C
Sbjct: 589 SSVWETLLGAC 599
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 127/249 (51%), Gaps = 4/249 (1%)
Query: 73 MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
+ Y+ + A+KLF+E+P K+ +W+++I GY+ GL +A LF +MQ + P+
Sbjct: 360 LTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPN 419
Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
T+ +L C+ G L G+ H T F+ + +V T L+ MYAKC I EA LF
Sbjct: 420 PVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFD 479
Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
+ KN V W TMI+GY +G G +A+ F +M G+ TF +L AC+
Sbjct: 480 LMTK-KNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVK 538
Query: 253 FGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
G ++ ++ GFE +V + ++D+ + G L A + +E I+ S ++G
Sbjct: 539 EGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGA 598
Query: 312 ARQGFHKEA 320
R HK+
Sbjct: 599 CR--IHKDT 605
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/450 (24%), Positives = 192/450 (42%), Gaps = 37/450 (8%)
Query: 255 AQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQ 314
AQ H I+ GF ++ + + L + G + AR + + + +N ++ GF+
Sbjct: 37 AQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVN 96
Query: 315 GFHKEALSLFKKMH-ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFV 373
+LS+F + + D+K + TY ++ + D + +H V G + +
Sbjct: 97 ESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLL 156
Query: 374 NNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
+ ++ MY K ++ A VF+ M +KD I W ++I+G + Y E+++ F D+ I+
Sbjct: 157 GSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDL-INES 215
Query: 434 CP--DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
C D + IL A AEL L G Q+H++ K+G S V + +Y+KCG I
Sbjct: 216 CTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMG 275
Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
+ +F D++ + A+I G NG+ + +L + +++ G + T V L+ H
Sbjct: 276 SALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHL 335
Query: 552 GLAENARWY-------------------------FESMDKVYGIKPGPD--HYACMIDLL 584
L Y ES K++ P + MI
Sbjct: 336 MLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395
Query: 585 GRSGKLIEAKALLDQMVG---EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAM 641
++G +A +L +M P+ +LSAC G L LG + ++L +
Sbjct: 396 TQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLG-KWVHDLVRSTDFESS 454
Query: 642 PYVQ--LSNMYSTAGKWEDAARVRKLMKSR 669
YV L MY+ G +A R+ LM +
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKK 484
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 466 bits (1200), Expect = e-130, Method: Compositional matrix adjust.
Identities = 251/659 (38%), Positives = 367/659 (55%), Gaps = 39/659 (5%)
Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGY 215
H I N+ + L+ YA K + A +F P+ +N + MI Y NG+
Sbjct: 62 HSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPE-RNVIIINVMIRSYVNNGF 120
Query: 216 GFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSA 275
+ ++ F M V + +TFP +L AC+ G ++HG G + ++V +
Sbjct: 121 YGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNG 180
Query: 276 LIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKID 335
L+ MY KCG L AR +L+ + VSWNS++VG+A+ +AL + ++M + I D
Sbjct: 181 LVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHD 240
Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
T S+L ++N + + + VK DM+ K G
Sbjct: 241 AGTMASLLPA------VSNTTTENVMYVK--------------DMFFKMGK--------- 271
Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
K ++SW +I + EA++ +S M G PD V ++S+L AC + + L
Sbjct: 272 ----KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSL 327
Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
G+++H + +L ++N+L+ +YAKCGC+ A VF++M +RDV++WTA+I
Sbjct: 328 GKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGF 387
Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPD 575
+G+G +A+ + ++ G PD I FV L ACSHAGL E R F+ M Y I P +
Sbjct: 388 SGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLE 447
Query: 576 HYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL 635
H ACM+DLLGR+GK+ EA + M EP+ VW ALL ACRVH D ++G AA+ LF+L
Sbjct: 448 HLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQL 507
Query: 636 EPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG 695
P + YV LSN+Y+ AG+WE+ +R +MKS+G++K PG S VE N +H F+ DR
Sbjct: 508 APEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRS 567
Query: 696 HPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLP 755
HP +IY ++D ++ +KE GYVPD ALH+VEEE KE LA HSEKLA+ F L+
Sbjct: 568 HPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTK 627
Query: 756 Q-----GAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
+ IRI KNLR+CGDCH A K IS + R II+RD+NRFH F+ G CSCGDYW
Sbjct: 628 EEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 173 bits (438), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 200/443 (45%), Gaps = 36/443 (8%)
Query: 73 MIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPS 132
++ AYA+ + A+K+F+E P +N + +I Y N G E ++F M RP
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 133 QYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFK 192
YT VL+ CS G + G + HG A K FV GLV MY KC + EA +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 193 MFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARD 252
++ V+W +++ GY+QN A+E R+M + + T S+L A + + +
Sbjct: 200 EMSR-RDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN 258
Query: 253 FGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFA 312
+YV+ DM+ K G + VSWN MI +
Sbjct: 259 V----------------MYVK----DMFFKMGK-------------KSLVSWNVMIGVYM 285
Query: 313 RQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKF 372
+ EA+ L+ +M A + D + SVL L+ K +H I +
Sbjct: 286 KNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL 345
Query: 373 VNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISG 432
+ NALIDMYAK G L+ A VF M+ +DV+SWT++I+ + G +A+ FS ++ SG
Sbjct: 346 LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSG 405
Query: 433 ICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSS-LSVDNSLVLVYAKCGCINDA 491
+ PD + + L+AC+ +LE G+ + + L +V + + G + +A
Sbjct: 406 LVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEA 465
Query: 492 NRVFDSMHTR-DVITWTALIMGC 513
R M + W AL+ C
Sbjct: 466 YRFIQDMSMEPNERVWGALLGAC 488
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 154/328 (46%), Gaps = 13/328 (3%)
Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
D+ ++VHS I+ + L+ YA ++ A VF+ + +++VI +I
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
+G Y E +K F M + PDH +L AC+ + G+++H K G S
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSS 173
Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
+L V N LV +Y KCG +++A V D M RDV++W +L++G AQN + +AL+ +M
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233
Query: 531 ARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKL 590
+ D T LL A S+ EN Y + M G K + MI + ++
Sbjct: 234 SVKISHDAGTMASLLPAVSNT-TTENV-MYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMP 290
Query: 591 IEAKALLDQMVG---EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLS 647
+EA L +M EPDA ++L AC L LG++ +E +P + L
Sbjct: 291 VEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGY---IERKKLIPNLLLE 347
Query: 648 N----MYSTAGKWEDAARVRKLMKSRGI 671
N MY+ G E A V + MKSR +
Sbjct: 348 NALIDMYAKCGCLEKARDVFENMKSRDV 375
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 155/362 (42%), Gaps = 41/362 (11%)
Query: 257 VHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGF 316
VH I+ N + L+ YA D+ SAR++ + N + N MI + GF
Sbjct: 61 VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120
Query: 317 HKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA 376
+ E + +F M +++ D +T+P VL + + + + +H K G FV N
Sbjct: 121 YGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNG 180
Query: 377 LIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPD 436
L+ MY K G L A +V + M +DV+SW SL+ G A + +++AL+ +M I D
Sbjct: 181 LVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHD 240
Query: 437 HVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFD 496
++S+L A + T E V +F K G
Sbjct: 241 AGTMASLLPAVSN-TTTENVMYVKDMFFKMG----------------------------- 270
Query: 497 SMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFAC---SHAGL 553
+ +++W +I +N EA++ Y +M A G +PD ++ +L AC S L
Sbjct: 271 ---KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSL 327
Query: 554 AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALL 613
+ Y E + P +ID+ + G L +A+ + + M D W A++
Sbjct: 328 GKKIHGYIERKKLI----PNLLLENALIDMYAKCGCLEKARDVFENMKSR-DVVSWTAMI 382
Query: 614 SA 615
SA
Sbjct: 383 SA 384
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 156/361 (43%), Gaps = 44/361 (12%)
Query: 68 FTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLE 127
F N +++ Y G L EA+ + +E ++ +W+SL+ GY+ +A E+ +M+
Sbjct: 176 FVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESV 235
Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
T+ ++L A+ N MY K
Sbjct: 236 KISHDAGTMASLLP-----------------AVSNTTTENV--------MYVK------- 263
Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAA 247
+ FKM K+ V+W MI Y +N +A+E + M +G E + + S+L AC
Sbjct: 264 DMFFKM--GKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGD 321
Query: 248 VSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSM 307
SA G ++HG I N+ +++ALIDMYAKCG L+ AR + E + + VSW +M
Sbjct: 322 TSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAM 381
Query: 308 IVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGF 367
I + G +A++LF K+ + D + + L + L +S L+
Sbjct: 382 ISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMT---- 437
Query: 368 EGYKFVNN-----ALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
+ YK ++D+ + G + A+ + ++ + + W +L+ C H +
Sbjct: 438 DHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIG 497
Query: 422 L 422
L
Sbjct: 498 L 498
Score = 109 bits (273), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 147/335 (43%), Gaps = 45/335 (13%)
Query: 17 SKIIGPARYTHNVGNSVKPASDL---NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTM 73
S I R H V +S L N + + G + EA + ++MS RD +WN++
Sbjct: 153 SGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSL 212
Query: 74 IAAYANSGRLREA-------------------------------------KKLFNETPFK 96
+ YA + R +A K +F + K
Sbjct: 213 VVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKK 272
Query: 97 NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFH 156
+ +W+ +I Y + +EA EL+ +M+ +G+ P ++ +VL C L G++ H
Sbjct: 273 SLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIH 332
Query: 157 GYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYG 216
GY + N + L+DMYAKC C+ +A +F+ ++ V+WT MI+ Y +G G
Sbjct: 333 GYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENM-KSRDVVSWTAMISAYGFSGRG 391
Query: 217 FKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ--S 274
A+ F ++ G+ + F + L AC+ + G +++ ++ ++ +
Sbjct: 392 CDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFK-LMTDHYKITPRLEHLA 450
Query: 275 ALIDMYAKCGDLDSARRLLEYSEID-NEVSWNSMI 308
++D+ + G + A R ++ ++ NE W +++
Sbjct: 451 CMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALL 485
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 88/216 (40%), Gaps = 39/216 (18%)
Query: 71 NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI--YGYSNYGLDIEAFELFWQMQLEG 128
N +I YA G L +A+ +F ++ +W+++I YG+S G D A LF ++Q G
Sbjct: 348 NALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCD--AVALFSKLQDSG 405
Query: 129 YRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAE 188
P L CS GLL+ G ++CF L + D Y
Sbjct: 406 LVPDSIAFVTTLAACSHAGLLEEG--------RSCFKL-------MTDHY---------- 440
Query: 189 YLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAV 248
K+ P ++ ++ G K E +R ++ +E N+ + ++L AC
Sbjct: 441 ---KITPRLEHLACMVDLL------GRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVH 491
Query: 249 SARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
S D G + E + Y L ++YAK G
Sbjct: 492 SDTDIGLLAADKLFQLAPEQSGY-YVLLSNIYAKAG 526
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 465 bits (1196), Expect = e-130, Method: Compositional matrix adjust.
Identities = 272/787 (34%), Positives = 410/787 (52%), Gaps = 92/787 (11%)
Query: 24 RYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRL 83
R T+ V + +++R S G+I+EA + F+ + + +WN++++ Y ++G
Sbjct: 9 RRTYLTSTGVNCSFEISR----LSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLP 64
Query: 84 REAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLC 143
+EA++LF+E +N +W+ L+ GY + +EA +F M
Sbjct: 65 KEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMP------------------ 106
Query: 144 SLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAW 203
+ N T +V Y + + EAE LF P+ +N V+W
Sbjct: 107 ---------------------ERNVVSWTAMVKGYMQEGMVGEAESLFWRMPE-RNEVSW 144
Query: 204 TTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILS 263
T M G +G KA + + M V+ V ++ + AR I
Sbjct: 145 TVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEAR--------LIFD 196
Query: 264 SGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSL 323
E NV + +I Y + +D AR+L E EVSW SM++G+ G ++A
Sbjct: 197 EMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEF 256
Query: 324 FKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAK 383
F+ M + V+ C NA+I + +
Sbjct: 257 FEVMPMK----------PVIAC-----------------------------NAMIVGFGE 277
Query: 384 QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSI 443
G + A VF+LM+D+D +W +I G EAL F+ M+ G+ P + SI
Sbjct: 278 VGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISI 337
Query: 444 LSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDV 503
LS CA L L++G+QVHA ++ + V + L+ +Y KCG + A VFD ++D+
Sbjct: 338 LSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDI 397
Query: 504 ITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFES 563
I W ++I G A +G G+EAL+ + +M + GT P+ +T + +L ACS+AG E FES
Sbjct: 398 IMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFES 457
Query: 564 MDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLE 623
M+ + + P +HY+C +D+LGR+G++ +A L++ M +PDATVW ALL AC+ H L+
Sbjct: 458 MESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLD 517
Query: 624 LGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETN 683
L E AA LFE EP NA YV LS++ ++ KW D A VRK M++ + K PGCSW+E
Sbjct: 518 LAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVG 577
Query: 684 SQVHIFISED-RGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHS 742
+VH+F + HP + I +++ L++EAGY PD + LH+V+EE K L+ HS
Sbjct: 578 KKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHS 637
Query: 743 EKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGN 802
E+LAVA+GLL LP+G PIR+ KNLRVCGDCH A+K IS V R IILRD+NRFHHF G
Sbjct: 638 ERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGE 697
Query: 803 CSCGDYW 809
CSC DYW
Sbjct: 698 CSCRDYW 704
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 465 bits (1196), Expect = e-130, Method: Compositional matrix adjust.
Identities = 248/697 (35%), Positives = 381/697 (54%), Gaps = 13/697 (1%)
Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
EAFE +M G S Y+ + C L G H + + + ++
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVL 125
Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
MY +C+ + +A+ LF + N V+ TTMI+ Y++ G KA+ F M G +
Sbjct: 126 QMYCECRSLEDADKLFDEMSE-LNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPS 184
Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEY 295
+ ++L + A DFG Q+H ++ +G +N +++ +++MY KCG L A+R+ +
Sbjct: 185 SMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQ 244
Query: 296 SEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNA 355
+ V+ ++VG+ + G ++AL LF + ++ D F + VL AS +LN
Sbjct: 245 MAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLG 304
Query: 356 KSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYH 415
K +H+ + K G E V L+D Y K + + A F +++ + +SW+++I+G
Sbjct: 305 KQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQM 364
Query: 416 GSYEEALKYFSDMRISGICP-DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSV 474
+EEA+K F +R + +SI AC+ L G QVHA +K S
Sbjct: 365 SQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYG 424
Query: 475 DNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGT 534
+++L+ +Y+KCGC++DAN VF+SM D++ WTA I G A G EAL+ +++M++ G
Sbjct: 425 ESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGM 484
Query: 535 KPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAK 594
KP+ +TF+ +L ACSHAGL E + ++M + Y + P DHY CMID+ RSG L EA
Sbjct: 485 KPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEAL 544
Query: 595 ALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAG 654
+ M EPDA WK LS C H +LELGE A L +L+P + YV N+Y+ AG
Sbjct: 545 KFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAG 604
Query: 655 KWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIK 714
KWE+AA + KLM R ++KE CSW++ ++H FI D+ HP +IY K+ E
Sbjct: 605 KWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEF----- 659
Query: 715 EAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTL--PQGAPIRIFKNLRVCGDC 772
G++ F + E + L HSE+LA+AFGL+++ API++FKNLR C DC
Sbjct: 660 -DGFMEGDMFQCNMTERREQ---LLDHSERLAIAFGLISVHGNAPAPIKVFKNLRACPDC 715
Query: 773 HTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
H K++S V I++RDS RFHHFK G CSC DYW
Sbjct: 716 HEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 234 bits (596), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 137/447 (30%), Positives = 233/447 (52%), Gaps = 6/447 (1%)
Query: 71 NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYR 130
N ++ Y L +A KLF+E N + +++I Y+ G+ +A LF M G +
Sbjct: 122 NCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDK 181
Query: 131 PSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYL 190
P +L+ L G Q H + I+ N + TG+V+MY KC + A+ +
Sbjct: 182 PPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRV 241
Query: 191 FKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSA 250
F K VA T ++ GY+Q G A++ F D+ EGVE + F F +L ACA++
Sbjct: 242 FDQMA-VKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEE 300
Query: 251 RDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVG 310
+ G Q+H C+ G E+ V V + L+D Y KC +SA R + N+VSW+++I G
Sbjct: 301 LNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISG 360
Query: 311 FARQGFHKEALSLFKKMHARDIKI-DDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
+ + +EA+ FK + +++ I + FTY S+ + D N VH+ +K G
Sbjct: 361 YCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIG 420
Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
++ +ALI MY+K G LD A VF M + D+++WT+ I+G AY+G+ EAL+ F M
Sbjct: 421 SQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMV 480
Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVD--NSLVLVYAKCGC 487
G+ P+ V ++L+AC+ ++E G+ L+ + ++D + ++ +YA+ G
Sbjct: 481 SCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAP-TIDHYDCMIDIYARSGL 539
Query: 488 INDANRVFDSM-HTRDVITWTALIMGC 513
+++A + +M D ++W + GC
Sbjct: 540 LDEALKFMKNMPFEPDAMSWKCFLSGC 566
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 77/202 (38%), Gaps = 60/202 (29%)
Query: 28 NVGNSVKPASDLNRALVD-----------FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAA 76
N+G V A + R+L+ +S G +D+A ++FE M + D W I+
Sbjct: 404 NIGGQVH-ADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISG 462
Query: 77 YANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTL 136
+A YG EA LF +M G +P+ T
Sbjct: 463 HA-------------------------------YYGNASEALRLFEKMVSCGMKPNSVTF 491
Query: 137 DNVLRLCSLKGLLQRGEQFHGYAIKTCFD--LNAFVVTG-------LVDMYAKCKCIFEA 187
VL CS GL+++G K C D L + V ++D+YA+ + EA
Sbjct: 492 IAVLTACSHAGLVEQG--------KHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEA 543
Query: 188 EYLFKMFPDGKNHVAWTTMITG 209
K P + ++W ++G
Sbjct: 544 LKFMKNMPFEPDAMSWKCFLSG 565
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 464 bits (1195), Expect = e-130, Method: Compositional matrix adjust.
Identities = 275/751 (36%), Positives = 407/751 (54%), Gaps = 74/751 (9%)
Query: 69 TWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEG 128
T N I + G++ EA+KLF+ K+ +W+S++ GY + +A +LF +M
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM---- 74
Query: 129 YRPSQYTLDNVLRLCSL-KGLLQRGEQFHGYAIKTCFDL----NAFVVTGLVDMYAKCKC 183
P + N++ L G ++ GE + FDL N T LV Y
Sbjct: 75 --PDR----NIISWNGLVSGYMKNGEIDEA---RKVFDLMPERNVVSWTALVKGYVHNGK 125
Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
+ AE LF P+ KN V+WT M+ G+ Q+G A + + + + + S++
Sbjct: 126 VDVAESLFWKMPE-KNKVSWTVMLIGFLQDGRIDDACKLYEMIP----DKDNIARTSMIH 180
Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
D + I E +V + ++ Y + +D AR++ + EVS
Sbjct: 181 GLCKEGRVDEARE----IFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVS 236
Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIV 363
W SM++G+ + G ++A LF+ M + V+ C
Sbjct: 237 WTSMLMGYVQNGRIEDAEELFEVMPVK----------PVIAC------------------ 268
Query: 364 KTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALK 423
NA+I ++G + A VF+ M++++ SW ++I +G EAL
Sbjct: 269 -----------NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALD 317
Query: 424 YFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYA 483
F M+ G+ P + SILS CA L L G+QVHA ++ + V + L+ +Y
Sbjct: 318 LFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYI 377
Query: 484 KCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQM-LARGTKPDYITFV 542
KCG + + +FD ++D+I W ++I G A +G G+EAL+ + +M L+ TKP+ +TFV
Sbjct: 378 KCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFV 437
Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
L ACS+AG+ E +ESM+ V+G+KP HYACM+D+LGR+G+ EA ++D M
Sbjct: 438 ATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTV 497
Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
EPDA VW +LL ACR H L++ E A L E+EP N+ Y+ LSNMY++ G+W D A +
Sbjct: 498 EPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAEL 557
Query: 663 RKLMKSRGIRKEPGCSWVETNSQVHIFISEDRG----HPLRTDIYSKIDEIMLLIKEAGY 718
RKLMK+R +RK PGCSW E ++VH F RG HP + I +DE+ L++EAGY
Sbjct: 558 RKLMKTRLVRKSPGCSWTEVENKVHAFT---RGGINSHPEQESILKILDELDGLLREAGY 614
Query: 719 VPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKY 778
PD ++ALH+V+EE K L YHSE+LAVA+ LL L +G PIR+ KNLRVC DCHTA+K
Sbjct: 615 NPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKI 674
Query: 779 ISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
IS V R IILRD+NRFHHF+ G CSC DYW
Sbjct: 675 ISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 228/477 (47%), Gaps = 53/477 (11%)
Query: 46 FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
+ +GEIDEA ++F+ M +R+ +W ++ Y ++G++ A+ LF + P KN +W+ ++
Sbjct: 89 YMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVML 148
Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI-KTCF 164
G+ G +A +L+ + P + DN+ R + GL + G I
Sbjct: 149 IGFLQDGRIDDACKLYEMI------PDK---DNIARTSMIHGLCKEGRVDEAREIFDEMS 199
Query: 165 DLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR 224
+ + T +V Y + + +A +F + P+ K V+WT+M+ GY QNG A E F
Sbjct: 200 ERSVITWTTMVTGYGQNNRVDDARKIFDVMPE-KTEVSWTSMLMGYVQNGRIEDAEELFE 258
Query: 225 DMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCG 284
M V+ V AC +A+I + G
Sbjct: 259 VMPVKPV-----------IAC----------------------------NAMISGLGQKG 279
Query: 285 DLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLN 344
++ ARR+ + + N+ SW ++I R GF EAL LF M + ++ T S+L+
Sbjct: 280 EIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILS 339
Query: 345 CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVIS 404
AS L++ K VH+ +V+ F+ +V + L+ MY K G L + ++F+ KD+I
Sbjct: 340 VCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIM 399
Query: 405 WTSLITGCAYHGSYEEALKYFSDMRISGIC-PDHVVVSSILSACAELTVLEFGQQVHAVF 463
W S+I+G A HG EEALK F +M +SG P+ V + LSAC+ ++E G +++
Sbjct: 400 WNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESM 459
Query: 464 LKSGGCSSLSVDNS-LVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNGK 518
G ++ + +V + + G N+A + DSM D W +L+ C + +
Sbjct: 460 ESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQ 516
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 150/269 (55%), Gaps = 4/269 (1%)
Query: 43 LVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWS 102
L+ + +G I++A +LFE M + N MI+ G + +A+++F+ +N +W
Sbjct: 241 LMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQ 300
Query: 103 SLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKT 162
++I + G ++EA +LF MQ +G RP+ TL ++L +C+ L G+Q H ++
Sbjct: 301 TVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRC 360
Query: 163 CFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIEC 222
FD++ +V + L+ MY KC + +++ +F FP K+ + W ++I+GY+ +G G +A++
Sbjct: 361 QFDVDVYVASVLMTMYIKCGELVKSKLIFDRFP-SKDIIMWNSIISGYASHGLGEEALKV 419
Query: 223 FRDMRVEG-VESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMY 280
F +M + G + N+ TF + L+AC+ + G +++ + S G + + ++DM
Sbjct: 420 FCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDML 479
Query: 281 AKCGDLDSARRLLEYSEIDNEVS-WNSMI 308
+ G + A +++ ++ + + W S++
Sbjct: 480 GRAGRFNEAMEMIDSMTVEPDAAVWGSLL 508
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 462 bits (1189), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/654 (36%), Positives = 388/654 (59%), Gaps = 5/654 (0%)
Query: 64 DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
DRD + +I Y G + A+ +F+ P K+ TW+++I G G + +LF+Q
Sbjct: 180 DRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239
Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
+ + P Y L VL CS+ L+ G+Q H + ++ +++A ++ L+D Y KC
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGR 299
Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
+ A LF P+ KN ++WTT+++GY QN +A+E F M G++ + + SILT
Sbjct: 300 VIAAHKLFNGMPN-KNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILT 358
Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
+CA++ A FG QVH + + + YV ++LIDMYAKC L AR++ + + V
Sbjct: 359 SCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVL 418
Query: 304 WNSMIVGFARQGFH---KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHS 360
+N+MI G++R G EAL++F+ M R I+ T+ S+L AS L +K +H
Sbjct: 419 FNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHG 478
Query: 361 LIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEE 420
L+ K G F +ALID+Y+ L + +VF+ M+ KD++ W S+ G EE
Sbjct: 479 LMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEE 538
Query: 421 ALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
AL F ++++S PD +++++A L ++ GQ+ H LK G + + N+L+
Sbjct: 539 ALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLD 598
Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
+YAKCG DA++ FDS +RDV+ W ++I A +G+GK+ALQ ++M++ G +P+YIT
Sbjct: 599 MYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYIT 658
Query: 541 FVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQM 600
FVG+L ACSHAGL E+ FE M + +GI+P +HY CM+ LLGR+G+L +A+ L+++M
Sbjct: 659 FVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKM 717
Query: 601 VGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAA 660
+P A VW++LLS C G++EL E AA +P ++ + LSN+Y++ G W +A
Sbjct: 718 PTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAK 777
Query: 661 RVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIK 714
+VR+ MK G+ KEPG SW+ N +VHIF+S+D+ H IY +D++++ I+
Sbjct: 778 KVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 275 bits (702), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 182/634 (28%), Positives = 316/634 (49%), Gaps = 26/634 (4%)
Query: 56 GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
GQ+ + D + N +I Y+ +G + A+K+F + P +N +WS+++ +++G+
Sbjct: 68 GQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYE 127
Query: 116 EA---FELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGE----QFHGYAIKTCFDLNA 168
E+ F FW+ + + P++Y L + ++ CS GL RG Q + +K+ FD +
Sbjct: 128 ESLVVFLEFWRTRKDS--PNEYILSSFIQACS--GLDGRGRWMVFQLQSFLVKSGFDRDV 183
Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
+V T L+D Y K I A +F P+ K+ V WTTMI+G + G + +++ F +
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALPE-KSTVTWTTMISGCVKMGRSYVSLQLFYQLME 242
Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
+ V + + ++L+AC+ + + G Q+H IL G E + + + LID Y KCG + +
Sbjct: 243 DNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIA 302
Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
A +L N +SW +++ G+ + HKEA+ LF M +K D + S+L AS
Sbjct: 303 AHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCAS 362
Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
L VH+ +K +V N+LIDMYAK L A VF++ DV+ + ++
Sbjct: 363 LHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAM 422
Query: 409 ITGCAYHGS---YEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLK 465
I G + G+ EAL F DMR I P + S+L A A LT L +Q+H + K
Sbjct: 423 IEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFK 482
Query: 466 SGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQF 525
G + ++L+ VY+ C C+ D+ VFD M +D++ W ++ G Q + +EAL
Sbjct: 483 YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNL 542
Query: 526 YDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLG 585
+ ++ +PD TF ++ A + + + + + K G++ P ++D+
Sbjct: 543 FLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLK-RGLECNPYITNALLDMYA 601
Query: 586 RSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFEL-----EPMNA 640
+ G +A D D W +++S+ HG+ G++A L ++ EP N
Sbjct: 602 KCGSPEDAHKAFDS-AASRDVVCWNSVISSYANHGE---GKKALQMLEKMMSEGIEP-NY 656
Query: 641 MPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKE 674
+ +V + + S AG ED + +LM GI E
Sbjct: 657 ITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPE 690
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 152/543 (27%), Positives = 261/543 (48%), Gaps = 38/543 (6%)
Query: 36 ASDLNRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPF 95
AS +N + + G + A +LF M +++ +W T+++ Y +
Sbjct: 284 ASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQN--------------- 328
Query: 96 KNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQF 155
L EA ELF M G +P Y ++L C+ L G Q
Sbjct: 329 ----------------ALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQV 372
Query: 156 HGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGY 215
H Y IK +++V L+DMYAKC C+ +A +F +F + V + MI GYS+ G
Sbjct: 373 HAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFA-AADVVLFNAMIEGYSRLGT 431
Query: 216 GF---KAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYV 272
+ +A+ FRDMR + + TF S+L A A++++ Q+HG + G +++
Sbjct: 432 QWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFA 491
Query: 273 QSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDI 332
SALID+Y+ C L +R + + ++ + V WNSM G+ +Q ++EAL+LF ++
Sbjct: 492 GSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRE 551
Query: 333 KIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFM 392
+ D+FT+ +++ + + + H ++K G E ++ NAL+DMYAK G+ + A
Sbjct: 552 RPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHK 611
Query: 393 VFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTV 452
F+ +DV+ W S+I+ A HG ++AL+ M GI P+++ +LSAC+ +
Sbjct: 612 AFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGL 671
Query: 453 LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRD-VITWTALIM 511
+E G + + L+ G +V + + G +N A + + M T+ I W +L+
Sbjct: 672 VEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLS 731
Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIK 571
GCA+ G E + +M D +F L + G+ A+ E M KV G+
Sbjct: 732 GCAKAGN-VELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERM-KVEGVV 789
Query: 572 PGP 574
P
Sbjct: 790 KEP 792
Score = 223 bits (567), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 153/523 (29%), Positives = 265/523 (50%), Gaps = 13/523 (2%)
Query: 139 VLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGK 198
+L+L + LL HG I +L+ ++ L+++Y++ + A +F+ P+ +
Sbjct: 50 LLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPE-R 108
Query: 199 NHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQFTFPSILTACAAVSARD--FGA 255
N V+W+TM++ + +G +++ F + R N++ S + AC+ + R
Sbjct: 109 NLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVF 168
Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
Q+ ++ SGF+ +VYV + LID Y K G++D AR + + + V+W +MI G + G
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228
Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNN 375
+L LF ++ ++ D + +VL+ + L K +H+ I++ G E + N
Sbjct: 229 RSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMN 288
Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICP 435
LID Y K G + A +FN M +K++ISWT+L++G + ++EA++ F+ M G+ P
Sbjct: 289 VLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKP 348
Query: 436 DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVF 495
D SSIL++CA L L FG QVHA +K+ + V NSL+ +YAKC C+ DA +VF
Sbjct: 349 DMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVF 408
Query: 496 DSMHTRDVITWTALIMGCAQNGKG---KEALQFYDQMLARGTKPDYITFVGLLFACSHAG 552
D DV+ + A+I G ++ G EAL + M R +P +TFV LL A +
Sbjct: 409 DIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLT 468
Query: 553 LAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKAL 612
++ M K YG+ + +ID+ L +++ + D+M D +W ++
Sbjct: 469 SLGLSKQIHGLMFK-YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEM-KVKDLVIWNSM 526
Query: 613 LSACRVHGDLELGERAANNLFELEPMNAMP-YVQLSNMYSTAG 654
+ + E A N EL+ P +NM + AG
Sbjct: 527 FAGYVQQSE---NEEALNLFLELQLSRERPDEFTFANMVTAAG 566
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 143/286 (50%), Gaps = 17/286 (5%)
Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
+ +L AS+ L+ VH I+ G E +++N LI++Y++ G + A VF M
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 399 DKDVISWTSLITGCAYHGSYEEALKYFSDM-RISGICPDHVVVSSILSACAELTVLEFGQ 457
+++++SW+++++ C +HG YEE+L F + R P+ ++SS + AC+ L G+
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLD----GR 162
Query: 458 ------QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIM 511
Q+ + +KSG + V L+ Y K G I+ A VFD++ + +TWT +I
Sbjct: 163 GRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMIS 222
Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIK 571
GC + G+ +LQ + Q++ PD +L ACS E + + + YG++
Sbjct: 223 GCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR-YGLE 281
Query: 572 PGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV--WKALLSA 615
+ID + G++I A L + G P+ + W LLS
Sbjct: 282 MDASLMNVLIDSYVKCGRVIAAHKLFN---GMPNKNIISWTTLLSG 324
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 462 bits (1188), Expect = e-129, Method: Compositional matrix adjust.
Identities = 238/592 (40%), Positives = 359/592 (60%), Gaps = 8/592 (1%)
Query: 226 MRVEGVESN--QFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKC 283
+RV ES+ Q T+ ++ C S+ +VH IL +G + + ++ + LI MY+
Sbjct: 66 IRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDL 125
Query: 284 GDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL 343
G +D AR++ + + WN++ G +E L L+ KM+ ++ D FTY VL
Sbjct: 126 GSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVL 185
Query: 344 N-CFASNIDLNN---AKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
C AS +N+ K +H+ + + G+ + ++ L+DMYA+ G +D A VF M
Sbjct: 186 KACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPV 245
Query: 400 KDVISWTSLITGCAYHGSYEEALKYFSDM--RISGICPDHVVVSSILSACAELTVLEFGQ 457
++V+SW+++I A +G EAL+ F +M P+ V + S+L ACA L LE G+
Sbjct: 246 RNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGK 305
Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
+H L+ G S L V ++LV +Y +CG + RVFD MH RDV++W +LI +G
Sbjct: 306 LIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHG 365
Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY 577
GK+A+Q +++MLA G P +TFV +L ACSH GL E + FE+M + +GIKP +HY
Sbjct: 366 YGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHY 425
Query: 578 ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEP 637
ACM+DLLGR+ +L EA ++ M EP VW +LL +CR+HG++EL ERA+ LF LEP
Sbjct: 426 ACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEP 485
Query: 638 MNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHP 697
NA YV L+++Y+ A W++ RV+KL++ RG++K PG W+E +++ F+S D +P
Sbjct: 486 KNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNP 545
Query: 698 LRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQG 757
L I++ + ++ +KE GY+P L+ +E E KE + HSEKLA+AFGL+ +G
Sbjct: 546 LMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKG 605
Query: 758 APIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
PIRI KNLR+C DCH K+IS + I++RD NRFH FK G CSCGDYW
Sbjct: 606 EPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 186 bits (472), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 111/377 (29%), Positives = 193/377 (51%), Gaps = 17/377 (4%)
Query: 57 QLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIE 116
+ + SD+D F +I Y++ G + A+K+F++T + + W++L + G E
Sbjct: 102 HILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEE 161
Query: 117 AFELFWQMQLEGYRPSQYTLDNVLRLCSLK----GLLQRGEQFHGYAIKTCFDLNAFVVT 172
L+W+M G ++T VL+ C L +G++ H + + + + +++T
Sbjct: 162 VLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMT 221
Query: 173 GLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVE 232
LVDMYA+ C+ A Y+F P +N V+W+ MI Y++NG F+A+ FR+M E +
Sbjct: 222 TLVDMYARFGCVDYASYVFGGMPV-RNVVSWSAMIACYAKNGKAFEALRTFREMMRETKD 280
Query: 233 S--NQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSAR 290
S N T S+L ACA+++A + G +HG IL G ++ + V SAL+ MY +CG L+ +
Sbjct: 281 SSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQ 340
Query: 291 RLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNI 350
R+ + + VSWNS+I + G+ K+A+ +F++M A T+ SVL +
Sbjct: 341 RVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEG 400
Query: 351 DLNNAKSVHSLI-----VKTGFEGYKFVNNALIDMYAKQGNLD-CAFMVFNLMQDKDVIS 404
+ K + + +K E Y ++D+ + LD A MV ++ +
Sbjct: 401 LVEEGKRLFETMWRDHGIKPQIEHYA----CMVDLLGRANRLDEAAKMVQDMRTEPGPKV 456
Query: 405 WTSLITGCAYHGSYEEA 421
W SL+ C HG+ E A
Sbjct: 457 WGSLLGSCRIHGNVELA 473
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 118/255 (46%), Gaps = 32/255 (12%)
Query: 42 ALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFT 100
LVD ++ G +D A +F M R+ +W+ MIA YA +G+ EA + F E
Sbjct: 222 TLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREM------- 274
Query: 101 WSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAI 160
+ + P+ T+ +VL+ C+ L++G+ HGY +
Sbjct: 275 ----------------------MRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYIL 312
Query: 161 KTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAI 220
+ D V++ LV MY +C + + +F D ++ V+W ++I+ Y +GYG KAI
Sbjct: 313 RRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHD-RDVVSWNSLISSYGVHGYGKKAI 371
Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDM 279
+ F +M G TF S+L AC+ + G ++ + G + + + ++D+
Sbjct: 372 QIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDL 431
Query: 280 YAKCGDLDSARRLLE 294
+ LD A ++++
Sbjct: 432 LGRANRLDEAAKMVQ 446
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 132/376 (35%), Gaps = 82/376 (21%)
Query: 336 DFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFN 395
+F S L + ++ LNN + +G G K NN LI K+G L A V +
Sbjct: 18 NFLPRSPLKPPSCSVALNNPS------ISSG-AGAKISNNQLIQSLCKEGKLKQAIRVLS 70
Query: 396 LMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEF 455
++ LI C + S +AL+
Sbjct: 71 QESSPSQQTYELLILCCGHRSSLSDALR-------------------------------- 98
Query: 456 GQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQ 515
VH L +G + L+ +Y+ G ++ A +VFD R + W AL
Sbjct: 99 ---VHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTL 155
Query: 516 NGKGKEALQFYDQMLARGTKPDYITFVGLLFACS---------------HAGLAEN---- 556
G G+E L Y +M G + D T+ +L AC HA L
Sbjct: 156 AGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSS 215
Query: 557 ------------ARW-YFESMDKVYGIKPGPD--HYACMIDLLGRSGKLIEAKALLDQMV 601
AR+ + V+G P + ++ MI ++GK EA +M+
Sbjct: 216 HVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMM 275
Query: 602 GE-----PDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQ-LSNMYSTAGK 655
E P++ ++L AC LE G+ + + +P + L MY GK
Sbjct: 276 RETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGK 335
Query: 656 WEDAARVRKLMKSRGI 671
E RV M R +
Sbjct: 336 LEVGQRVFDRMHDRDV 351
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/605 (38%), Positives = 351/605 (58%), Gaps = 32/605 (5%)
Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
T+ +++ C+ A + G +VH I +SGF + + + L+ MYAKCG L AR++ +
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM 146
Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD-----------IKIDDFTYPSVL-- 343
+ SWN M+ G+A G +EA LF +M +D +K D VL
Sbjct: 147 PNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYS 206
Query: 344 ----------NCFASNID---------LNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQ 384
N F +I + K +H IV+ G + + + ++L+DMY K
Sbjct: 207 LMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKC 266
Query: 385 GNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSIL 444
G +D A +F+ + +KDV+SWTS+I + E FS++ S P+ + +L
Sbjct: 267 GCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVL 326
Query: 445 SACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVI 504
+ACA+LT E G+QVH + G +SLV +Y KCG I A V D D++
Sbjct: 327 NACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLV 386
Query: 505 TWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESM 564
+WT+LI GCAQNG+ EAL+++D +L GTKPD++TFV +L AC+HAGL E +F S+
Sbjct: 387 SWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSI 446
Query: 565 DKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLEL 624
+ + + DHY C++DLL RSG+ + K+++ +M +P +W ++L C +G+++L
Sbjct: 447 TEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDL 506
Query: 625 GERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNS 684
E AA LF++EP N + YV ++N+Y+ AGKWE+ ++RK M+ G+ K PG SW E
Sbjct: 507 AEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKR 566
Query: 685 QVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEK 744
+ H+FI+ D HP+ I + E+ +KE GYVP + LH+VE+E KE L YHSEK
Sbjct: 567 KRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEK 626
Query: 745 LAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCS 804
LAVAF +L+ +G I++FKNLR C DCH A+K+IS + R I +RDS RFH F+ G CS
Sbjct: 627 LAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCS 686
Query: 805 CGDYW 809
CGDYW
Sbjct: 687 CGDYW 691
Score = 196 bits (499), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 204/385 (52%), Gaps = 4/385 (1%)
Query: 40 NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
NR L ++ G + +A ++F++M +RD +WN M+ YA G L EA+KLF+E K+ +
Sbjct: 124 NRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSY 183
Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQ-LEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGY 158
+W++++ GY EA L+ MQ + RP+ +T+ + + ++RG++ HG+
Sbjct: 184 SWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGH 243
Query: 159 AIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFK 218
++ D + + + L+DMY KC CI EA +F + K+ V+WT+MI Y ++ +
Sbjct: 244 IVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVE-KDVVSWTSMIDRYFKSSRWRE 302
Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID 278
F ++ N++TF +L ACA ++ + G QVHG + GF+ + S+L+D
Sbjct: 303 GFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVD 362
Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
MY KCG+++SA+ +++ + VSW S+I G A+ G EAL F + K D T
Sbjct: 363 MYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVT 422
Query: 339 YPSVLN-CFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
+ +VL+ C + + + +S+ K L+D+ A+ G + V + M
Sbjct: 423 FVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEM 482
Query: 398 QDK-DVISWTSLITGCAYHGSYEEA 421
K W S++ GC+ +G+ + A
Sbjct: 483 PMKPSKFLWASVLGGCSTYGNIDLA 507
Score = 186 bits (472), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 142/510 (27%), Positives = 235/510 (46%), Gaps = 68/510 (13%)
Query: 123 QMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCK 182
Q+ +P T N++++CS L+ G++ H + + F + L+ MYAKC
Sbjct: 75 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134
Query: 183 CIFEAEYLFKMFPD------------------------------GKNHVAWTTMITGYSQ 212
+ +A +F P+ K+ +WT M+TGY +
Sbjct: 135 SLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVK 194
Query: 213 NGYGFKAIECFRDM-RVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVY 271
+A+ + M RV N FT + A AAV G ++HG I+ +G +++
Sbjct: 195 KDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEV 254
Query: 272 VQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARD 331
+ S+L+DMY KCG +D AR + + + VSW SMI + + +E SLF ++
Sbjct: 255 LWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSC 314
Query: 332 IKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAF 391
+ +++T+ VLN A K VH + + GF+ Y F +++L+DMY K GN++ A
Sbjct: 315 ERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAK 374
Query: 392 MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELT 451
V + D++SWTSLI GCA +G +EALKYF + SG PDHV ++LSAC
Sbjct: 375 HVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAG 434
Query: 452 VLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIM 511
++E G L Y+ I + +R+ HT D +T L+
Sbjct: 435 LVEKG---------------------LEFFYS----ITEKHRL---SHTSD--HYTCLVD 464
Query: 512 GCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIK 571
A++G+ ++ +M KP + +L CS G + A E+ +++ I+
Sbjct: 465 LLARSGRFEQLKSVISEM---PMKPSKFLWASVLGGCSTYGNIDLAE---EAAQELFKIE 518
Query: 572 P-GPDHYACMIDLLGRSGKLIEAKALLDQM 600
P P Y M ++ +GK E + +M
Sbjct: 519 PENPVTYVTMANIYAAAGKWEEEGKMRKRM 548
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 142/298 (47%), Gaps = 10/298 (3%)
Query: 56 GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDI 115
G + D D W++++ Y G + EA+ +F++ K+ +W+S+I Y
Sbjct: 242 GHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWR 301
Query: 116 EAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLV 175
E F LF ++ RP++YT VL C+ + G+Q HGY + FD +F + LV
Sbjct: 302 EGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLV 361
Query: 176 DMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQ 235
DMY KC I A+++ P + V+WT++I G +QNG +A++ F + G + +
Sbjct: 362 DMYTKCGNIESAKHVVDGCPK-PDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDH 420
Query: 236 FTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQ-SALIDMYAKCGDLDSARRLL- 293
TF ++L+AC + G + I ++ + L+D+ A+ G + + ++
Sbjct: 421 VTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVIS 480
Query: 294 EYSEIDNEVSWNSMIVGFARQG---FHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
E ++ W S++ G + G +EA K+ + TY ++ N +A+
Sbjct: 481 EMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPE----NPVTYVTMANIYAA 534
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 66/149 (44%), Gaps = 5/149 (3%)
Query: 519 GKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYA 578
G++ L+ Q+L R KP T+ L+ CS E + E + + G PG +
Sbjct: 66 GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHI-RTSGFVPGIVIWN 124
Query: 579 CMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPM 638
++ + + G L++A+ + D+M D W +++ + ++ L E A E+
Sbjct: 125 RLLRMYAKCGSLVDARKVFDEMPNR-DLCSWNVMVNG---YAEVGLLEEARKLFDEMTEK 180
Query: 639 NAMPYVQLSNMYSTAGKWEDAARVRKLMK 667
++ + + Y + E+A + LM+
Sbjct: 181 DSYSWTAMVTGYVKKDQPEEALVLYSLMQ 209
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust.
Identities = 237/641 (36%), Positives = 369/641 (57%), Gaps = 3/641 (0%)
Query: 172 TGLVDMYAKCKCIF-EAEYLFKMFPDGK--NHVAWTTMITGYSQNGYGFKAIECFRDMRV 228
T LV++ K F + +Y + +F + N + ++I G+ N + ++ F +R
Sbjct: 45 TFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRK 104
Query: 229 EGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDS 288
G+ + FTFP +L AC S+R G +H ++ GF +V ++L+ +Y+ G L+
Sbjct: 105 HGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLND 164
Query: 289 ARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFAS 348
A +L + + V+W ++ G+ G H+EA+ LFKKM +K D + VL+
Sbjct: 165 AHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVH 224
Query: 349 NIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSL 408
DL++ + + + + + FV L+++YAK G ++ A VF+ M +KD+++W+++
Sbjct: 225 VGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTM 284
Query: 409 ITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGG 468
I G A + +E ++ F M + PD + LS+CA L L+ G+ ++ +
Sbjct: 285 IQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEF 344
Query: 469 CSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQ 528
++L + N+L+ +YAKCG + VF M +D++ A I G A+NG K + + Q
Sbjct: 345 LTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQ 404
Query: 529 MLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSG 588
G PD TF+GLL C HAGL ++ +F ++ VY +K +HY CM+DL GR+G
Sbjct: 405 TEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAG 464
Query: 589 KLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSN 648
L +A L+ M P+A VW ALLS CR+ D +L E L LEP NA YVQLSN
Sbjct: 465 MLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSN 524
Query: 649 MYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDE 708
+YS G+W++AA VR +M +G++K PG SW+E +VH F+++D+ HPL IY+K+++
Sbjct: 525 IYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLED 584
Query: 709 IMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRV 768
+ ++ G+VP F +VEEE KE L YHSEKLAVA GL++ G IR+ KNLRV
Sbjct: 585 LGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRV 644
Query: 769 CGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
CGDCH MK IS + R I++RD+NRFH F G+CSC DYW
Sbjct: 645 CGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/431 (29%), Positives = 216/431 (50%), Gaps = 11/431 (2%)
Query: 89 LFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGL 148
LF+ T F N F ++SLI G+ N L E +LF ++ G +T VL+ C+
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 149 LQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMIT 208
+ G H +K F+ + +T L+ +Y+ + +A LF PD ++ V WT + +
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPD-RSVVTWTALFS 185
Query: 209 GYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEA 268
GY+ +G +AI+ F+ M GV+ + + +L+AC V D G + + +
Sbjct: 186 GYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQK 245
Query: 269 NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMH 328
N +V++ L+++YAKCG ++ AR + + + V+W++MI G+A F KE + LF +M
Sbjct: 246 NSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQML 305
Query: 329 ARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLD 388
++K D F+ L+ AS L+ + SLI + F F+ NALIDMYAK G +
Sbjct: 306 QENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMA 365
Query: 389 CAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACA 448
F VF M++KD++ + I+G A +G + + F GI PD +L C
Sbjct: 366 RGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCV 425
Query: 449 ELTVLEFGQQVHAVFLKSGGC-----SSLSVDNSLVLVYAKCGCINDANRVFDSMHTR-D 502
+++ G + F + C ++ +V ++ + G ++DA R+ M R +
Sbjct: 426 HAGLIQDGLR----FFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPN 481
Query: 503 VITWTALIMGC 513
I W AL+ GC
Sbjct: 482 AIVWGALLSGC 492
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 184/355 (51%), Gaps = 11/355 (3%)
Query: 64 DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
+ D ++++ Y+ SGRL +A KLF+E P ++ TW++L GY+ G EA +LF +
Sbjct: 143 NHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKK 202
Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
M G +P Y + VL C G L GE Y + N+FV T LV++YAKC
Sbjct: 203 MVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGK 262
Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILT 243
+ +A +F + K+ V W+TMI GY+ N + + IE F M E ++ +QF+ L+
Sbjct: 263 MEKARSVFDSMVE-KDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLS 321
Query: 244 ACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
+CA++ A D G I F N+++ +ALIDMYAKCG + + + + + V
Sbjct: 322 SCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVI 381
Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNAKSVHSL- 361
N+ I G A+ G K + ++F + I D T+ +L C + + + + +++
Sbjct: 382 MNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAIS 441
Query: 362 ---IVKTGFEGYKFVNNALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGC 412
+K E Y ++D++ + G LD A+ ++ ++ + I W +L++GC
Sbjct: 442 CVYALKRTVEHY----GCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGC 492
Score = 103 bits (256), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 122/267 (45%), Gaps = 7/267 (2%)
Query: 50 GEIDEAGQLFEKMSD----RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLI 105
G++D + + M + ++ F T++ YA G++ +A+ +F+ K+ TWS++I
Sbjct: 226 GDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMI 285
Query: 106 YGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFD 165
GY++ E ELF QM E +P Q+++ L C+ G L GE + F
Sbjct: 286 QGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFL 345
Query: 166 LNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRD 225
N F+ L+DMYAKC + +FK + K+ V I+G ++NG+ + F
Sbjct: 346 TNLFMANALIDMYAKCGAMARGFEVFKEMKE-KDIVIMNAAISGLAKNGHVKLSFAVFGQ 404
Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCI-LSSGFEANVYVQSALIDMYAKCG 284
G+ + TF +L C G + I + V ++D++ + G
Sbjct: 405 TEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAG 464
Query: 285 DLDSARRLL-EYSEIDNEVSWNSMIVG 310
LD A RL+ + N + W +++ G
Sbjct: 465 MLDDAYRLICDMPMRPNAIVWGALLSG 491
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 459 bits (1182), Expect = e-128, Method: Compositional matrix adjust.
Identities = 270/808 (33%), Positives = 434/808 (53%), Gaps = 46/808 (5%)
Query: 10 NFSLRCRSKIIGPARYT----HNVGNSVK-PASDLNRALVDFSNSGEIDEAGQLFEKMSD 64
N +L S I PAR + V V PA L RAL F++S +++A QLF++M+
Sbjct: 35 NRNLEFDSGISKPARLVLRDRYKVTKQVNDPA--LTRALRGFADSRLMEDALQLFDEMNK 92
Query: 65 RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQM 124
D F WN MI G+++ GL IEA + + +M
Sbjct: 93 ADAFLWNVMIK-------------------------------GFTSCGLYIEAVQFYSRM 121
Query: 125 QLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCI 184
G + +T V++ + L+ G++ H IK F + +V L+ +Y K C
Sbjct: 122 VFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCA 181
Query: 185 FEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTA 244
++AE +F+ P+ ++ V+W +MI+GY G GF ++ F++M G + ++F+ S L A
Sbjct: 182 WDAEKVFEEMPE-RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGA 240
Query: 245 CAAVSARDFGAQVHGCILSSGFEA-NVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVS 303
C+ V + G ++H + S E +V V ++++DMY+K G++ A R+ N V+
Sbjct: 241 CSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVA 300
Query: 304 WNSMIVGFARQGFHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNIDLNNAKSVHSLI 362
WN MI +AR G +A F+KM ++ ++ D T ++L A + +++H
Sbjct: 301 WNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYA 356
Query: 363 VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEAL 422
++ GF + + ALIDMY + G L A ++F+ M +K+VISW S+I +G AL
Sbjct: 357 MRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSAL 416
Query: 423 KYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVY 482
+ F ++ S + PD ++SIL A AE L G+++HA +KS S+ + NSLV +Y
Sbjct: 417 ELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMY 476
Query: 483 AKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFV 542
A CG + DA + F+ + +DV++W ++IM A +G G+ ++ + +M+A P+ TF
Sbjct: 477 AMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFA 536
Query: 543 GLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVG 602
LL ACS +G+ + YFESM + YGI PG +HY CM+DL+GR+G AK L++M
Sbjct: 537 SLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPF 596
Query: 603 EPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARV 662
P A +W +LL+A R H D+ + E AA +F++E N YV L NMY+ AG+WED R+
Sbjct: 597 VPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRI 656
Query: 663 RKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAG-YVPD 721
+ LM+S+GI + S VE + H+F + DR H IY +D + ++ E YV
Sbjct: 657 KLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHC 716
Query: 722 MNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISA 781
++ + + HS +LA FGL++ G + + N R+C CH ++ S
Sbjct: 717 VSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASR 776
Query: 782 VYLRHIILRDSNRFHHFKAGNCSCGDYW 809
+ R I++ DS FHHF G CSCG+YW
Sbjct: 777 LTRREIVVGDSKIFHHFSNGRCSCGNYW 804
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 459 bits (1182), Expect = e-128, Method: Compositional matrix adjust.
Identities = 237/614 (38%), Positives = 368/614 (59%), Gaps = 6/614 (0%)
Query: 199 NHVAWTTM-ITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
N+V T + I+ NG + E +M + G E + ++L AC A G +V
Sbjct: 18 NYVLQTILPISQLCSNG---RLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRV 74
Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
H ++ + + Y+++ L+ Y KC L+ AR++L+ N VSW +MI +++ G
Sbjct: 75 HAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHS 134
Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
EAL++F +M D K ++FT+ +VL L K +H LIVK ++ + FV ++L
Sbjct: 135 SEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSL 194
Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
+DMYAK G + A +F + ++DV+S T++I G A G EEAL+ F + G+ P++
Sbjct: 195 LDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNY 254
Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
V +S+L+A + L +L+ G+Q H L+ + NSL+ +Y+KCG ++ A R+FD+
Sbjct: 255 VTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDN 314
Query: 498 MHTRDVITWTALIMGCAQNGKGKEALQFYDQML-ARGTKPDYITFVGLLFACSHAGLAEN 556
M R I+W A+++G +++G G+E L+ + M + KPD +T + +L CSH + +
Sbjct: 315 MPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDT 374
Query: 557 ARWYFESM-DKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSA 615
F+ M YG KPG +HY C++D+LGR+G++ EA + +M +P A V +LL A
Sbjct: 375 GLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGA 434
Query: 616 CRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEP 675
CRVH +++GE L E+EP NA YV LSN+Y++AG+W D VR +M + + KEP
Sbjct: 435 CRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEP 494
Query: 676 GCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKE 735
G SW++ +H F + DR HP R ++ +K+ EI + +K+AGYVPD++ L++V+EE KE
Sbjct: 495 GRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKE 554
Query: 736 IGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRF 795
L HSEKLA+ FGL+ +G PIR+FKNLR+C DCH K S V+ R + LRD NRF
Sbjct: 555 KMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRF 614
Query: 796 HHFKAGNCSCGDYW 809
H G CSCGDYW
Sbjct: 615 HQIVDGICSCGDYW 628
Score = 204 bits (519), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 184/331 (55%), Gaps = 2/331 (0%)
Query: 119 ELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMY 178
E +M + G + D +L C K L+ G++ H + IKT + ++ T L+ Y
Sbjct: 38 EALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFY 97
Query: 179 AKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTF 238
KC C+ +A + P+ KN V+WT MI+ YSQ G+ +A+ F +M + N+FTF
Sbjct: 98 GKCDCLEDARKVLDEMPE-KNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTF 156
Query: 239 PSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEI 298
++LT+C S G Q+HG I+ ++++++V S+L+DMYAK G + AR + E
Sbjct: 157 ATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPE 216
Query: 299 DNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSV 358
+ VS ++I G+A+ G +EAL +F ++H+ + + TY S+L + L++ K
Sbjct: 217 RDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQA 276
Query: 359 HSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSY 418
H +++ Y + N+LIDMY+K GNL A +F+ M ++ ISW +++ G + HG
Sbjct: 277 HCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLG 336
Query: 419 EEALKYFSDMRISG-ICPDHVVVSSILSACA 448
E L+ F MR + PD V + ++LS C+
Sbjct: 337 REVLELFRLMRDEKRVKPDAVTLLAVLSGCS 367
Score = 186 bits (471), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 113/345 (32%), Positives = 179/345 (51%), Gaps = 13/345 (3%)
Query: 83 LREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRL 142
L +A+K+ +E P KN +W+++I YS G EA +F +M +P+++T VL
Sbjct: 103 LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTS 162
Query: 143 CSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVA 202
C L G+Q HG +K +D + FV + L+DMYAK I EA +F+ P+ ++ V+
Sbjct: 163 CIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPE-RDVVS 221
Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
T +I GY+Q G +A+E F + EG+ N T+ S+LTA + ++ D G Q H +L
Sbjct: 222 CTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVL 281
Query: 263 SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
+Q++LIDMY+KCG+L ARRL + +SWN+M+VG+++ G +E L
Sbjct: 282 RRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLE 341
Query: 323 LFKKMH-ARDIKIDDFTYPSVLN-CFASNIDLNNAKSVHSLI-----VKTGFEGYKFVNN 375
LF+ M + +K D T +VL+ C ++ ++ K G E Y
Sbjct: 342 LFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHY----G 397
Query: 376 ALIDMYAKQGNLDCAFMVFNLMQDKDVIS-WTSLITGCAYHGSYE 419
++DM + G +D AF M K SL+ C H S +
Sbjct: 398 CIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVD 442
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 122/229 (53%), Gaps = 4/229 (1%)
Query: 64 DRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQ 123
D F ++++ YA +G+++EA+++F P ++ + +++I GY+ GLD EA E+F +
Sbjct: 185 DSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHR 244
Query: 124 MQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKC 183
+ EG P+ T ++L S LL G+Q H + ++ A + L+DMY+KC
Sbjct: 245 LHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGN 304
Query: 184 IFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSIL 242
+ A LF P+ + ++W M+ GYS++G G + +E FR MR E V+ + T ++L
Sbjct: 305 LSYARRLFDNMPE-RTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVL 363
Query: 243 TACAAVSARDFGAQVHGCILSS--GFEANVYVQSALIDMYAKCGDLDSA 289
+ C+ D G + +++ G + ++DM + G +D A
Sbjct: 364 SGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEA 412
Score = 41.2 bits (95), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 39 LNRALVD-FSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLF 90
L +L+D +S G + A +LF+ M +R +WN M+ Y+ G RE +LF
Sbjct: 291 LQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELF 343
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 455 bits (1171), Expect = e-127, Method: Compositional matrix adjust.
Identities = 237/630 (37%), Positives = 374/630 (59%), Gaps = 11/630 (1%)
Query: 190 LFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVS 249
LF + D + +W ++I +++G +A+ F MR + + +FP + AC+++
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 250 ARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIV 309
G Q H G++++++V SALI MY+ CG L+ AR++ + N VSW SMI
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTY------PSVLNCFASNIDLNNAKSVHSLIV 363
G+ G +A+SLFK + + DD + SV++ + +S+HS ++
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 364 KTGFEGYKFVNNALIDMYAK--QGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
K GF+ V N L+D YAK +G + A +F+ + DKD +S+ S+++ A G EA
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 422 LKYFSDMRISGICP-DHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVL 480
+ F + + + + + +S++L A + L G+ +H ++ G + V S++
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIID 330
Query: 481 VYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYIT 540
+Y KCG + A + FD M ++V +WTA+I G +G +AL+ + M+ G +P+YIT
Sbjct: 331 MYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYIT 390
Query: 541 FVGLLFACSHAGL-AENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQ 599
FV +L ACSHAGL E RW F +M +G++PG +HY CM+DLLGR+G L +A L+ +
Sbjct: 391 FVSVLAACSHAGLHVEGWRW-FNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQR 449
Query: 600 MVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDA 659
M +PD+ +W +LL+ACR+H ++EL E + LFEL+ N Y+ LS++Y+ AG+W+D
Sbjct: 450 MKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDV 509
Query: 660 ARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYV 719
RVR +MK+RG+ K PG S +E N +VH+F+ D HP R IY + E+ + EAGYV
Sbjct: 510 ERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYV 569
Query: 720 PDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYI 779
+ + H+V+EE KE+ L HSEKLA+AFG++ G+ + + KNLRVC DCH +K I
Sbjct: 570 SNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLI 629
Query: 780 SAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
S + R ++RD+ RFHHFK G CSCGDYW
Sbjct: 630 SKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 222/437 (50%), Gaps = 13/437 (2%)
Query: 89 LFNETPFK-NFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKG 147
LFN K + F+W+S+I + G EA F M+ P++ + ++ CS
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 148 LLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMI 207
+ G+Q H A + + FV + L+ MY+ C + +A +F P +N V+WT+MI
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPK-RNIVSWTSMI 149
Query: 208 TGYSQNGYGFKAIECFRDMRVEGVESNQFTF------PSILTACAAVSARDFGAQVHGCI 261
GY NG A+ F+D+ V+ + + F S+++AC+ V A+ +H +
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209
Query: 262 LSSGFEANVYVQSALIDMYAKCGD--LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKE 319
+ GF+ V V + L+D YAK G+ + AR++ + + VS+NS++ +A+ G E
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269
Query: 320 ALSLFKKM-HARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALI 378
A +F+++ + + + T +VL + + L K +H +++ G E V ++I
Sbjct: 270 AFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII 329
Query: 379 DMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHV 438
DMY K G ++ A F+ M++K+V SWT++I G HG +AL+ F M SG+ P+++
Sbjct: 330 DMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYI 389
Query: 439 VVSSILSACAELTV-LEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
S+L+AC+ + +E + +A+ + G L +V + + G + A +
Sbjct: 390 TFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQR 449
Query: 498 MHTR-DVITWTALIMGC 513
M + D I W++L+ C
Sbjct: 450 MKMKPDSIIWSSLLAAC 466
Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 184/371 (49%), Gaps = 20/371 (5%)
Query: 66 DGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQ 125
D F + +I Y+ G+L +A+K+F+E P +N +W+S+I GY G ++A LF +
Sbjct: 110 DIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLL 169
Query: 126 L-EGYRPSQYTLD-----NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYA 179
+ E LD +V+ CS E H + IK FD V L+D YA
Sbjct: 170 VDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYA 229
Query: 180 KC--KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDM-RVEGVESNQF 236
K + A +F D K+ V++ ++++ Y+Q+G +A E FR + + + V N
Sbjct: 230 KGGEGGVAVARKIFDQIVD-KDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAI 288
Query: 237 TFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYS 296
T ++L A + A G +H ++ G E +V V +++IDMY KCG +++AR+ +
Sbjct: 289 TLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRM 348
Query: 297 EIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVL-NCFASNIDLNNA 355
+ N SW +MI G+ G +AL LF M ++ + T+ SVL C + + +
Sbjct: 349 KNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGW 408
Query: 356 KSVHSLI----VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDK-DVISWTSLIT 410
+ +++ V+ G E Y ++D+ + G L A+ + M+ K D I W+SL+
Sbjct: 409 RWFNAMKGRFGVEPGLEHY----GCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLA 464
Query: 411 GCAYHGSYEEA 421
C H + E A
Sbjct: 465 ACRIHKNVELA 475
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 33/261 (12%)
Query: 50 GEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYS 109
G + A ++F+++ D+D ++N++++ YA SG EA ++F T++++
Sbjct: 234 GGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAI----- 288
Query: 110 NYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAF 169
TL VL S G L+ G+ H I+ + +
Sbjct: 289 -------------------------TLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVI 323
Query: 170 VVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVE 229
V T ++DMY KC + A F + KN +WT MI GY +G+ KA+E F M
Sbjct: 324 VGTSIIDMYCKCGRVETARKAFDRMKN-KNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDS 288
GV N TF S+L AC+ G + + G E + ++D+ + G L
Sbjct: 383 GVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQK 442
Query: 289 ARRLLEYSEID-NEVSWNSMI 308
A L++ ++ + + W+S++
Sbjct: 443 AYDLIQRMKMKPDSIIWSSLL 463
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 7/180 (3%)
Query: 36 ASDLNRALVDFSNSGEIDEA----GQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFN 91
A L+ L+ S+SG + Q+ + D ++I Y GR+ A+K F+
Sbjct: 287 AITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFD 346
Query: 92 ETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQR 151
KN +W+++I GY +G +A ELF M G RP+ T +VL CS GL
Sbjct: 347 RMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVE 406
Query: 152 GEQFHGYAIKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
G ++ A+K F + + +VD+ + + +A L + + + W++++
Sbjct: 407 GWRWFN-AMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 452 bits (1164), Expect = e-126, Method: Compositional matrix adjust.
Identities = 239/592 (40%), Positives = 354/592 (59%), Gaps = 16/592 (2%)
Query: 219 AIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALID 278
A+ F MR + N T+ S+L + +R A + E + + + ++
Sbjct: 80 ALRVFHGMRAK----NTITWNSLLIGISKDPSRMMEAHQ---LFDEIPEPDTFSYNIMLS 132
Query: 279 MYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFT 338
Y + + + A+ + + SWN+MI G+AR+G ++A LF M ++ + +
Sbjct: 133 CYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKN----EVS 188
Query: 339 YPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQ 398
+ ++++ + DL A + G + A+I Y K ++ A +F M
Sbjct: 189 WNAMISGYIECGDLEKASHFFKVAPVRGVVAW----TAMITGYMKAKKVELAEAMFKDMT 244
Query: 399 -DKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQ 457
+K++++W ++I+G + E+ LK F M GI P+ +SS L C+EL+ L+ G+
Sbjct: 245 VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGR 304
Query: 458 QVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNG 517
Q+H + KS C+ ++ SL+ +Y KCG + DA ++F+ M +DV+ W A+I G AQ+G
Sbjct: 305 QIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHG 364
Query: 518 KGKEALQFYDQMLARGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHY 577
+AL + +M+ +PD+ITFV +L AC+HAGL YFESM + Y ++P PDHY
Sbjct: 365 NADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHY 424
Query: 578 ACMIDLLGRSGKLIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEP 637
CM+DLLGR+GKL EA L+ M P A V+ LL ACRVH ++EL E AA L +L
Sbjct: 425 TCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNS 484
Query: 638 MNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHP 697
NA YVQL+N+Y++ +WED ARVRK MK + K PG SW+E ++VH F S DR HP
Sbjct: 485 QNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHP 544
Query: 698 LRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQG 757
I+ K+ E+ +K AGY P++ FALHNVEEE KE L +HSEKLAVAFG + LPQG
Sbjct: 545 ELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQG 604
Query: 758 APIRIFKNLRVCGDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
+ I++FKNLR+CGDCH A+K+IS + R II+RD+ RFHHFK G+CSCGDYW
Sbjct: 605 SQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 157 bits (396), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 133/487 (27%), Positives = 212/487 (43%), Gaps = 45/487 (9%)
Query: 19 IIGPARYTHNVGNSVKPASDLNRALVDFS-NSGEIDEAGQLFEKMSDRDGFTWNTMIAAY 77
I G R H G K N L+ S + + EA QLF+++ + D F++N M++ Y
Sbjct: 77 IDGALRVFH--GMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCY 134
Query: 78 ANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLD 137
+ +A+ F+ PFK+ +W+++I GY+ G +A ELF+ M +E S +
Sbjct: 135 VRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM-MEKNEVSWNAMI 193
Query: 138 NVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDG 197
+ C G L++ F K T ++ Y K K + AE +FK
Sbjct: 194 SGYIEC---GDLEKASHF----FKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVN 246
Query: 198 KNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQV 257
KN V W MI+GY +N ++ FR M EG+ N S L C+ +SA G Q+
Sbjct: 247 KNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQI 306
Query: 258 HGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFH 317
H + S +V ++LI MY KCG+L A +L E + + V+WN+MI G+A+ G
Sbjct: 307 HQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNA 366
Query: 318 KEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNAL 377
+AL LF++M I+ D T+ +VL A N H+ +V G ++ ++
Sbjct: 367 DKALCLFREMIDNKIRPDWITFVAVL--LACN---------HAGLVNIGMAYFE----SM 411
Query: 378 IDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGICPDH 437
+ Y + D +T ++ G EEALK M P
Sbjct: 412 VRDYKVEPQPD---------------HYTCMVDLLGRAGKLEEALKLIRSMPFR---PHA 453
Query: 438 VVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDANRVFDS 497
V ++L AC +E + L+ ++ L +YA D RV
Sbjct: 454 AVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGY-VQLANIYASKNRWEDVARVRKR 512
Query: 498 MHTRDVI 504
M +V+
Sbjct: 513 MKESNVV 519
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 447 bits (1150), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/520 (40%), Positives = 333/520 (64%), Gaps = 5/520 (0%)
Query: 295 YSEIDNEVS---WNSMIVGFARQGFHKEALSLFKKMHARD-IKIDDFTYPSVLNCFASNI 350
+S+I+ ++ WN++I G+A G A SL+++M ++ D TYP ++ +
Sbjct: 76 FSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMA 135
Query: 351 DLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLIT 410
D+ +++HS+++++GF +V N+L+ +YA G++ A+ VF+ M +KD+++W S+I
Sbjct: 136 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 195
Query: 411 GCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCS 470
G A +G EEAL +++M GI PD + S+LSACA++ L G++VH +K G
Sbjct: 196 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 255
Query: 471 SLSVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQML 530
+L N L+ +YA+CG + +A +FD M ++ ++WT+LI+G A NG GKEA++ + M
Sbjct: 256 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 315
Query: 531 A-RGTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGK 589
+ G P ITFVG+L+ACSH G+ + YF M + Y I+P +H+ CM+DLL R+G+
Sbjct: 316 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 375
Query: 590 LIEAKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNM 649
+ +A + M +P+ +W+ LL AC VHGD +L E A + +LEP ++ YV LSNM
Sbjct: 376 VKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNM 435
Query: 650 YSTAGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEI 709
Y++ +W D ++RK M G++K PG S VE ++VH F+ D+ HP IY+K+ E+
Sbjct: 436 YASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEM 495
Query: 710 MLLIKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVC 769
++ GYVP ++ +VEEE KE + YHSEK+A+AF L++ P+ +PI + KNLRVC
Sbjct: 496 TGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVC 555
Query: 770 GDCHTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
DCH A+K +S VY R I++RD +RFHHFK G+CSC DYW
Sbjct: 556 ADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 192/368 (52%), Gaps = 30/368 (8%)
Query: 86 AKKLFN--ETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGY-RPSQYTLDNVLRL 142
A K+F+ E P N F W++LI GY+ G I AF L+ +M++ G P +T +++
Sbjct: 72 AHKVFSKIEKPI-NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKA 130
Query: 143 CSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVA 202
+ ++ GE H I++ F +V L+ +YA C + A +F P+ K+ VA
Sbjct: 131 VTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE-KDLVA 189
Query: 203 WTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCIL 262
W ++I G+++NG +A+ + +M +G++ + FT S+L+ACA + A G +VH ++
Sbjct: 190 WNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 249
Query: 263 SSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALS 322
G N++ + L+D+YA+CG ++ A+ L + N VSW S+IVG A GF KEA+
Sbjct: 250 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIE 309
Query: 323 LFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNA------ 376
LFK M + + +L C + + + A S H +VK GFE ++ +
Sbjct: 310 LFKYMESTE---------GLLPCEITFVGILYACS-HCGMVKEGFEYFRRMREEYKIEPR 359
Query: 377 ------LIDMYAKQGNLDCAFMVFNLM-QDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
++D+ A+ G + A+ M +V+ W +L+ C HG + L F+ ++
Sbjct: 360 IEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG--DSDLAEFARIQ 417
Query: 430 ISGICPDH 437
I + P+H
Sbjct: 418 ILQLEPNH 425
Score = 176 bits (445), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 182/343 (53%), Gaps = 20/343 (5%)
Query: 187 AEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEG-VESNQFTFPSILTAC 245
A +F N W T+I GY++ G A +R+MRV G VE + T+P ++ A
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 246 AAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWN 305
++ G +H ++ SGF + +YVQ++L+ +YA CGD+ SA ++ + + V+WN
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 306 SMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT 365
S+I GFA G +EAL+L+ +M+++ IK D FT S+L+ A L K VH ++K
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 366 GFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYF 425
G +N L+D+YA+ G ++ A +F+ M DK+ +SWTSLI G A +G +EA++ F
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 426 SDMR-ISGICPDHVVVSSILSACAELTVL----EFGQQVHAVF-----LKSGGCSSLSVD 475
M G+ P + IL AC+ ++ E+ +++ + ++ GC
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGC------ 365
Query: 476 NSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGCAQNG 517
+V + A+ G + A SM + +V+ W L+ C +G
Sbjct: 366 --MVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
Score = 122 bits (307), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 132/261 (50%), Gaps = 9/261 (3%)
Query: 56 GQLFEKMSDRDGF-----TWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSN 110
G+ + R GF N+++ YAN G + A K+F++ P K+ W+S+I G++
Sbjct: 140 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 199
Query: 111 YGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFV 170
G EA L+ +M +G +P +T+ ++L C+ G L G++ H Y IK N
Sbjct: 200 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 259
Query: 171 VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR-VE 229
L+D+YA+C + EA+ LF D KN V+WT++I G + NG+G +AIE F+ M E
Sbjct: 260 SNVLLDLYARCGRVEEAKTLFDEMVD-KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 318
Query: 230 GVESNQFTFPSILTACAAVSARDFGAQVHGCILSS-GFEANVYVQSALIDMYAKCGDLDS 288
G+ + TF IL AC+ G + + E + ++D+ A+ G +
Sbjct: 319 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKK 378
Query: 289 ARRLLEYSEID-NEVSWNSMI 308
A ++ + N V W +++
Sbjct: 379 AYEYIKSMPMQPNVVIWRTLL 399
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 445 bits (1145), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/577 (39%), Positives = 342/577 (59%)
Query: 233 SNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRL 292
SN+ IL CA A HG I+ E +V + + LI+ Y+KCG ++ AR++
Sbjct: 59 SNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQV 118
Query: 293 LEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDL 352
+ + VSWN+MI + R EAL +F +M K +FT SVL+ N D
Sbjct: 119 FDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDA 178
Query: 353 NNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGC 412
K +H L VKT + +V AL+D+YAK G + A VF MQDK ++W+S++ G
Sbjct: 179 LECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGY 238
Query: 413 AYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSL 472
+ +YEEAL + + + + +SS++ AC+ L L G+Q+HAV KSG S++
Sbjct: 239 VQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNV 298
Query: 473 SVDNSLVLVYAKCGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR 532
V +S V +YAKCG + ++ +F + +++ W +I G A++ + KE + +++M
Sbjct: 299 FVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQD 358
Query: 533 GTKPDYITFVGLLFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIE 592
G P+ +TF LL C H GL E R +F+ M YG+ P HY+CM+D+LGR+G L E
Sbjct: 359 GMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSE 418
Query: 593 AKALLDQMVGEPDATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYST 652
A L+ + +P A++W +LL++CRV+ +LEL E AA LFELEP NA +V LSN+Y+
Sbjct: 419 AYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAA 478
Query: 653 AGKWEDAARVRKLMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLL 712
+WE+ A+ RKL++ ++K G SW++ +VH F + GHP +I S +D +++
Sbjct: 479 NKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIK 538
Query: 713 IKEAGYVPDMNFALHNVEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDC 772
++ GY P + LH+VE KE L HSEKLA+ FGL+ LP+ +P+RI KNLR+C DC
Sbjct: 539 FRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDC 598
Query: 773 HTAMKYISAVYLRHIILRDSNRFHHFKAGNCSCGDYW 809
H MK S R II+RD NRFHHF G+CSCGD+W
Sbjct: 599 HEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 231/437 (52%), Gaps = 17/437 (3%)
Query: 20 IGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEA----GQLFEKMSDRDGFTWNTMIA 75
+ P RY++ N + ++ L + +G + EA G++ + D N +I
Sbjct: 49 VSPGRYSNEFSNR----NLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLIN 104
Query: 76 AYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYT 135
AY+ G + A+++F+ ++ +W+++I Y+ ++ EA ++F +M+ EG++ S++T
Sbjct: 105 AYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFT 164
Query: 136 LDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFP 195
+ +VL C + ++ H ++KTC DLN +V T L+D+YAKC I +A +F+
Sbjct: 165 ISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ 224
Query: 196 DGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSARDFGA 255
D K+ V W++M+ GY QN +A+ +R + +E NQFT S++ AC+ ++A G
Sbjct: 225 D-KSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGK 283
Query: 256 QVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQG 315
Q+H I SGF +NV+V S+ +DMYAKCG L + + + N WN++I GFA+
Sbjct: 284 QMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHA 343
Query: 316 FHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKT-GFEGYKFVN 374
KE + LF+KM + ++ T+ S+L+ + + L+ T G
Sbjct: 344 RPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHY 403
Query: 375 NALIDMYAKQGNLDCAF-MVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRISGI 433
+ ++D+ + G L A+ ++ ++ D W SL+ C + + E L + ++ +
Sbjct: 404 SCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLE--LAEVAAEKLFEL 461
Query: 434 CPD----HVVVSSILSA 446
P+ HV++S+I +A
Sbjct: 462 EPENAGNHVLLSNIYAA 478
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 264/739 (35%), Positives = 394/739 (53%), Gaps = 82/739 (11%)
Query: 72 TMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRP 131
+I + S R+ EA+++FN+ P + ++ +I GY+ ++A LF +M +
Sbjct: 40 VLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVR---- 95
Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
D V + G ++ C D+N V LF
Sbjct: 96 -----DVVSWNSMISGCVE------------CGDMNTAV------------------KLF 120
Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
P+ ++ V+WT M+ G CFR +V+ E + P TA
Sbjct: 121 DEMPE-RSVVSWTAMVNG------------CFRSGKVDQAERLFYQMPVKDTAA------ 161
Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
+ + VHG Y + G +D A +L + N +SW +MI G
Sbjct: 162 -WNSMVHG--------------------YLQFGKVDDALKLFKQMPGKNVISWTTMICGL 200
Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
+ EAL LFK M IK + V+ A+ + VH LI+K GF +
Sbjct: 201 DQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEE 260
Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMRIS 431
+V+ +LI YA + + VF+ + V WT+L++G + + +E+AL FS M +
Sbjct: 261 YVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRN 320
Query: 432 GICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCINDA 491
I P+ +S L++C+ L L++G+++H V +K G + V NSLV++Y+ G +NDA
Sbjct: 321 SILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDA 380
Query: 492 NRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFACSHA 551
VF + + +++W ++I+GCAQ+G+GK A + QM+ +PD ITF GLL ACSH
Sbjct: 381 VSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHC 440
Query: 552 GLAENARWYFESMDK-VYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATVWK 610
G E R F M + I HY CM+D+LGR GKL EA+ L+++MV +P+ VW
Sbjct: 441 GFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWL 500
Query: 611 ALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKSRG 670
ALLSACR+H D++ GE+AA +F L+ ++ YV LSN+Y++AG+W + +++R MK G
Sbjct: 501 ALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNG 560
Query: 671 IRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHNVE 730
I K+PG SWV + H F S D+ H R IY K++ + +KE GY PD ALH+VE
Sbjct: 561 IMKKPGSSWVVIRGKKHEFFSGDQPHCSR--IYEKLEFLREKLKELGYAPDYRSALHDVE 618
Query: 731 EEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHIILR 790
+E KE L YHSE+LA+AFGL+ +G+ + + KNLRVC DCHT +K IS V R I+LR
Sbjct: 619 DEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLR 678
Query: 791 DSNRFHHFKAGNCSCGDYW 809
D RFHHFK G CSCGDYW
Sbjct: 679 DPIRFHHFKNGTCSCGDYW 697
Score = 210 bits (534), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 141/471 (29%), Positives = 234/471 (49%), Gaps = 18/471 (3%)
Query: 49 SGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY 108
S IDEA ++F ++ + MI Y S RL +A LF+E P ++ +W+S+I G
Sbjct: 48 SRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGC 107
Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQ-FHGYAIKTCFDLN 167
G A +LF +M S + ++ C G + + E+ F+ +K N
Sbjct: 108 VECGDMNTAVKLFDEMP----ERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWN 163
Query: 168 AFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMR 227
+ +V Y + + +A LFK P GKN ++WTTMI G QN +A++ F++M
Sbjct: 164 S-----MVHGYLQFGKVDDALKLFKQMP-GKNVISWTTMICGLDQNERSGEALDLFKNML 217
Query: 228 VEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLD 287
++S F ++TACA A G QVHG I+ GF YV ++LI YA C +
Sbjct: 218 RCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIG 277
Query: 288 SARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFA 347
+R++ + + W +++ G++ H++ALS+F M I + T+ S LN +
Sbjct: 278 DSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCS 337
Query: 348 SNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTS 407
+ L+ K +H + VK G E FV N+L+ MY+ GN++ A VF + K ++SW S
Sbjct: 338 ALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNS 397
Query: 408 LITGCAYHGSYEEALKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSG 467
+I GCA HG + A F M PD + + +LSAC+ LE G+++ + S
Sbjct: 398 IIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKL--FYYMSS 455
Query: 468 GCSSLSVD----NSLVLVYAKCGCINDANRVFDSMHTR-DVITWTALIMGC 513
G + + +V + +CG + +A + + M + + + W AL+ C
Sbjct: 456 GINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSAC 506
Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 183/385 (47%), Gaps = 18/385 (4%)
Query: 49 SGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGY 108
SG++D+A +LF +M +D WN+M+ Y G++ +A KLF + P KN +W+++I G
Sbjct: 141 SGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGL 200
Query: 109 SNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNA 168
EA +LF M + + V+ C+ G Q HG IK F
Sbjct: 201 DQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEE 260
Query: 169 FVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNH---VAWTTMITGYSQNGYGFKAIECFRD 225
+V L+ YA CK I ++ +F D K H WT +++GYS N A+ F
Sbjct: 261 YVSASLITFYANCKRIGDSRKVF----DEKVHEQVAVWTALLSGYSLNKKHEDALSIFSG 316
Query: 226 MRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGD 285
M + NQ TF S L +C+A+ D+G ++HG + G E + +V ++L+ MY+ G+
Sbjct: 317 MLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGN 376
Query: 286 LDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNC 345
++ A + + VSWNS+IVG A+ G K A +F +M + + D+ T+ +L+
Sbjct: 377 VNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSA 436
Query: 346 FASNIDLNNAKSVHSLI------VKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQD 399
+ L + + + + + Y ++D+ + G L A + M
Sbjct: 437 CSHCGFLEKGRKLFYYMSSGINHIDRKIQHY----TCMVDILGRCGKLKEAEELIERMVV 492
Query: 400 K-DVISWTSLITGCAYHGSYEEALK 423
K + + W +L++ C H + K
Sbjct: 493 KPNEMVWLALLSACRMHSDVDRGEK 517
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 70/172 (40%), Gaps = 33/172 (19%)
Query: 40 NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
N +V +S+SG +++A +F K+ + +WN++I A GR +
Sbjct: 365 NSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGK--------------- 409
Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
W AF +F QM P + T +L CS G L++G + Y
Sbjct: 410 -W---------------AFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYM 453
Query: 160 IKTCFDLNAFV--VTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITG 209
++ + T +VD+ +C + EAE L + N + W +++
Sbjct: 454 SSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSA 505
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 441 bits (1135), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/676 (35%), Positives = 377/676 (55%), Gaps = 9/676 (1%)
Query: 71 NTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYG---LDIEAFELFWQMQLE 127
N ++ YA G+L +A +FN K+ +W+SLI GYS G +LF +M+ +
Sbjct: 53 NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ 112
Query: 128 GYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEA 187
P+ YTL + + S G Q H +K + +V T LV MY K + +
Sbjct: 113 DILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDG 172
Query: 188 EYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFR---DMRVEGVESNQFTFPSILTA 244
+F P+ +N W+TM++GY+ G +AI+ F + EG +S+ + F ++L++
Sbjct: 173 LKVFAYMPE-RNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSS 230
Query: 245 CAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSW 304
AA G Q+H + +G V + +AL+ MY+KC L+ A ++ + S N ++W
Sbjct: 231 LAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITW 290
Query: 305 NSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVK 364
++M+ G+++ G EA+ LF +M + IK ++T VLN + L K +HS ++K
Sbjct: 291 SAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK 350
Query: 365 TGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKY 424
GFE + F AL+DMYAK G L A F+ +Q++DV WTSLI+G + EEAL
Sbjct: 351 LGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALIL 410
Query: 425 FSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAK 484
+ M+ +GI P+ ++S+L AC+ L LE G+QVH +K G + + ++L +Y+K
Sbjct: 411 YRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSK 470
Query: 485 CGCINDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGL 544
CG + D N VF +DV++W A+I G + NG+G EAL+ +++MLA G +PD +TFV +
Sbjct: 471 CGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNI 530
Query: 545 LFACSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEP 604
+ ACSH G E +YF M G+ P DHYACM+DLL R+G+L EAK ++ +
Sbjct: 531 ISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDH 590
Query: 605 DATVWKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRK 664
+W+ LLSAC+ HG ELG A L L + YVQLS +Y+ G+ D RV K
Sbjct: 591 GLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWK 650
Query: 665 LMKSRGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNF 724
M++ G+ KE GCSW+E +Q H+F+ D HP+ + + + + E G+V ++
Sbjct: 651 HMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFVTVLDS 710
Query: 725 ALHNVEEEGKEIGLAY 740
+ EEEG ++ ++
Sbjct: 711 SFVE-EEEGTQLSTSF 725
Score = 229 bits (584), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 160/551 (29%), Positives = 275/551 (49%), Gaps = 21/551 (3%)
Query: 6 FKILNFSLRCRSKIIGPARYTHNVGNSVKPASDLNRALVDFSNSGEIDEAGQLFEKMSD- 64
+ ++ R++ I P YT + K S L + V +A L KMS
Sbjct: 100 YTVMQLFREMRAQDILPNAYT--LAGIFKAESSLQSSTVG-------RQAHALVVKMSSF 150
Query: 65 RDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGL---DIEAFELF 121
D + +++ Y +G + + K+F P +N +TWS+++ GY+ G I+ F LF
Sbjct: 151 GDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLF 210
Query: 122 WQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKC 181
+ + EG S Y VL + + G Q H IK + LV MY+KC
Sbjct: 211 LREKEEG-SDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKC 269
Query: 182 KCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSI 241
+ + EA +F D +N + W+ M+TGYSQNG +A++ F M G++ +++T +
Sbjct: 270 ESLNEACKMFDSSGD-RNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGV 328
Query: 242 LTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNE 301
L AC+ + + G Q+H +L GFE +++ +AL+DMYAK G L AR+ + + +
Sbjct: 329 LNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDV 388
Query: 302 VSWNSMIVGFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSL 361
W S+I G+ + ++EAL L+++M I +D T SVL +S L K VH
Sbjct: 389 ALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGH 448
Query: 362 IVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEA 421
+K GF + +AL MY+K G+L+ +VF +KDV+SW ++I+G +++G +EA
Sbjct: 449 TIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEA 508
Query: 422 LKYFSDMRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDN--SLV 479
L+ F +M G+ PD V +I+SAC+ +E G + G VD+ +V
Sbjct: 509 LELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDP-KVDHYACMV 567
Query: 480 LVYAKCGCINDANRVFDSMHT-RDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPD- 537
+ ++ G + +A +S + + W L+ C +GK + + ++++A G++
Sbjct: 568 DLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESS 627
Query: 538 -YITFVGLLFA 547
Y+ G+ A
Sbjct: 628 TYVQLSGIYTA 638
Score = 187 bits (475), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 203/376 (53%), Gaps = 9/376 (2%)
Query: 254 GAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFAR 313
G VHG I+ +G + + L++ YAKCG L A + + VSWNS+I G+++
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 314 QGFHKEA---LSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGY 370
G + + LF++M A+DI + +T + +S + H+L+VK G
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 371 KFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFS---D 427
+V+ +L+ MY K G ++ VF M +++ +W+++++G A G EEA+K F+
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLR 212
Query: 428 MRISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGC 487
+ G D+ V +++LS+ A + G+Q+H + +K+G +++ N+LV +Y+KC
Sbjct: 213 EKEEGSDSDY-VFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCES 271
Query: 488 INDANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLARGTKPDYITFVGLLFA 547
+N+A ++FDS R+ ITW+A++ G +QNG+ EA++ + +M + G KP T VG+L A
Sbjct: 272 LNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNA 331
Query: 548 CSHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDAT 607
CS E + + K+ G + ++D+ ++G L +A+ D + E D
Sbjct: 332 CSDICYLEEGKQLHSFLLKL-GFERHLFATTALVDMYAKAGCLADARKGFD-CLQERDVA 389
Query: 608 VWKALLSACRVHGDLE 623
+W +L+S + D E
Sbjct: 390 LWTSLISGYVQNSDNE 405
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 439 bits (1128), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/621 (36%), Positives = 354/621 (57%), Gaps = 33/621 (5%)
Query: 221 ECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDMY 280
E F+ R+ + +N F + +C + G Q+H ++ SGF ++ ++ + L+ MY
Sbjct: 31 EAFQRFRL-NIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMY 89
Query: 281 AKCGDLDSA-------------------------------RRLLEYSEIDNEVSWNSMIV 309
+K GD SA R++ + +WN+MI
Sbjct: 90 SKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIA 149
Query: 310 GFARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEG 369
G + F++E LSLF++MH D++T SV + A ++ + +H +K G E
Sbjct: 150 GLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLEL 209
Query: 370 YKFVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDMR 429
VN++L MY + G L +V M +++++W +LI G A +G E L + M+
Sbjct: 210 DLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMK 269
Query: 430 ISGICPDHVVVSSILSACAELTVLEFGQQVHAVFLKSGGCSSLSVDNSLVLVYAKCGCIN 489
ISG P+ + ++LS+C++L + GQQ+HA +K G S ++V +SL+ +Y+KCGC+
Sbjct: 270 ISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLG 329
Query: 490 DANRVFDSMHTRDVITWTALIMGCAQNGKGKEALQFYDQMLAR-GTKPDYITFVGLLFAC 548
DA + F D + W+++I +G+G EA++ ++ M + + + + F+ LL+AC
Sbjct: 330 DAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYAC 389
Query: 549 SHAGLAENARWYFESMDKVYGIKPGPDHYACMIDLLGRSGKLIEAKALLDQMVGEPDATV 608
SH+GL + F+ M + YG KPG HY C++DLLGR+G L +A+A++ M + D +
Sbjct: 390 SHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVI 449
Query: 609 WKALLSACRVHGDLELGERAANNLFELEPMNAMPYVQLSNMYSTAGKWEDAARVRKLMKS 668
WK LLSAC +H + E+ +R + +++P ++ YV L+N++++A +W D + VRK M+
Sbjct: 450 WKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRD 509
Query: 669 RGIRKEPGCSWVETNSQVHIFISEDRGHPLRTDIYSKIDEIMLLIKEAGYVPDMNFALHN 728
+ ++KE G SW E +VH F DR +IYS + E+ L +K GY PD LH+
Sbjct: 510 KNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHD 569
Query: 729 VEEEGKEIGLAYHSEKLAVAFGLLTLPQGAPIRIFKNLRVCGDCHTAMKYISAVYLRHII 788
++EE KE L HSEKLAVAF L+ LP+GAPIRI KNLRVC DCH A KYIS + R I
Sbjct: 570 MDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREIT 629
Query: 789 LRDSNRFHHFKAGNCSCGDYW 809
LRD +RFHHF G CSCGDYW
Sbjct: 630 LRDGSRFHHFINGKCSCGDYW 650
Score = 183 bits (465), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 202/392 (51%), Gaps = 4/392 (1%)
Query: 40 NRALVDFSNSGEIDEAGQLFEKMSDRDGFTWNTMIAAYANSGRLREAKKLFNETPFKNFF 99
N + +S G+ A ++ +M ++ + N +I Y +G L A+K+F+E P +
Sbjct: 83 NHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLT 142
Query: 100 TWSSLIYGYSNYGLDIEAFELFWQMQLEGYRPSQYTLDNVLRLCSLKGLLQRGEQFHGYA 159
TW+++I G + + E LF +M G+ P +YTL +V + + G+Q HGY
Sbjct: 143 TWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYT 202
Query: 160 IKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLFKMFPDGKNHVAWTTMITGYSQNGYGFKA 219
IK +L+ V + L MY + + + E + + P +N VAW T+I G +QNG
Sbjct: 203 IKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMP-VRNLVAWNTLIMGNAQNGCPETV 261
Query: 220 IECFRDMRVEGVESNQFTFPSILTACAAVSARDFGAQVHGCILSSGFEANVYVQSALIDM 279
+ ++ M++ G N+ TF ++L++C+ ++ R G Q+H + G + V V S+LI M
Sbjct: 262 LYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISM 321
Query: 280 YAKCGDLDSARRLLEYSEIDNEVSWNSMIVGFARQGFHKEALSLFKKMHAR-DIKIDDFT 338
Y+KCG L A + E ++EV W+SMI + G EA+ LF M + +++I++
Sbjct: 322 YSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVA 381
Query: 339 YPSVL-NCFASNIDLNNAKSVHSLIVKTGFEGYKFVNNALIDMYAKQGNLDCAFMVFNLM 397
+ ++L C S + + ++ K GF+ ++D+ + G LD A + M
Sbjct: 382 FLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSM 441
Query: 398 QDK-DVISWTSLITGCAYHGSYEEALKYFSDM 428
K D++ W +L++ C H + E A + F ++
Sbjct: 442 PIKTDIVIWKTLLSACNIHKNAEMAQRVFKEI 473
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/462 (23%), Positives = 213/462 (46%), Gaps = 8/462 (1%)
Query: 72 TMIAAYANSGRLREAKKLFNETPFKNFFTWSSLIYGYSNYGLDIEAFELFWQMQLEGYRP 131
T IA + G LREA + F F N ++ I + +L + + G+
Sbjct: 18 TAIATLCSKGNLREAFQRFRLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSS 77
Query: 132 SQYTLDNVLRLCSLKGLLQRGEQFHGYAIKTCFDLNAFVVTGLVDMYAKCKCIFEAEYLF 191
++ ++++ + S G +G K + + ++ G Y + + A +F
Sbjct: 78 DKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILING----YVRAGDLVNARKVF 133
Query: 192 KMFPDGKNHVAWTTMITGYSQNGYGFKAIECFRDMRVEGVESNQFTFPSILTACAAVSAR 251
PD K W MI G Q + + + FR+M G +++T S+ + A + +
Sbjct: 134 DEMPDRK-LTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSV 192
Query: 252 DFGAQVHGCILSSGFEANVYVQSALIDMYAKCGDLDSARRLLEYSEIDNEVSWNSMIVGF 311
G Q+HG + G E ++ V S+L MY + G L ++ + N V+WN++I+G
Sbjct: 193 SIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGN 252
Query: 312 ARQGFHKEALSLFKKMHARDIKIDDFTYPSVLNCFASNIDLNNAKSVHSLIVKTGFEGYK 371
A+ G + L L+K M + + T+ +VL+ + + +H+ +K G
Sbjct: 253 AQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVV 312
Query: 372 FVNNALIDMYAKQGNLDCAFMVFNLMQDKDVISWTSLITGCAYHGSYEEALKYFSDM-RI 430
V ++LI MY+K G L A F+ +D+D + W+S+I+ +HG +EA++ F+ M
Sbjct: 313 AVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQ 372
Query: 431 SGICPDHVVVSSILSACAELTVLEFGQQVHAVFL-KSGGCSSLSVDNSLVLVYAKCGCIN 489
+ + + V ++L AC+ + + G ++ + + K G L +V + + GC++
Sbjct: 373 TNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLD 432
Query: 490 DANRVFDSMHTR-DVITWTALIMGCAQNGKGKEALQFYDQML 530
A + SM + D++ W L+ C + + A + + ++L
Sbjct: 433 QAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEIL 474
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 303,839,449
Number of Sequences: 539616
Number of extensions: 12891589
Number of successful extensions: 38798
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 380
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 27789
Number of HSP's gapped (non-prelim): 2956
length of query: 809
length of database: 191,569,459
effective HSP length: 126
effective length of query: 683
effective length of database: 123,577,843
effective search space: 84403666769
effective search space used: 84403666769
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 66 (30.0 bits)