Your job contains 1 sequence.
>003587
MARGQATILFRIYRSKNNVSRVGALSSNQCFHSVGRCDKWVLEKNQFGLTFDGRKREFSA
SLIDTVRFHLPSGNTRFIELKARSFCSSVGNEGLVNNGTATKPKVEDVEQESGVNFVQGG
EEDKVEVLDDYFDGSVISDSTMVESVHKNSNQSVRFLHLSTRDPVEVFGELRSTEKGAKI
NRSDFEVLREVFRFFSNSGWAANQALAVYIGKSFFPTAAGKFRSYFIKKCPDDVAQYLVW
LGPSDDAVKFLFPIFVEFCIEEFPDEIKRFRAMIESADLTKPHTWFPFARVMKRKIIYHC
GPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQEKKLVPFSN
HIACTVEMVSTDEMYDVAVIDEIQMMSDACRGYAWTRALLGLMADEIHLCGDPSVLDVVR
KICSETGDELHEQHYERFKPLVVEAKTLLGDLRNVRSGDCVVAFSRREIFEVKMAIEKHT
NHHCCVIYGALPPETRRQQANLFNDQDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYNG
DKIIPVPGSQVKQIAGRAGRRGSIYPDGLTTTLNLDDLDYLIECLKQPFEVVKKVGLFPF
FEQVELFAGQLSNYTFCQLLEKFGENCRLDGSYFLCRHDHIKKVANMLEKVQGLSLEDRF
NFCFAPVNIRDPKAMYHLLRFASSYSKNAPVSIAMGMPKGSAKNDAELLDLETKHQVLSM
YLWLSHQFKEEVFPYAKKAEAMATDIAELLGQSLTNANWKPESRQAGKPKLHQQREDGYD
RPRSIIKSYENRKRQEKTSLTLHTEKIPA
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003587
(809 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2151911 - symbol:AT5G39840 species:3702 "Arabi... 2626 3.9e-273 1
UNIPROTKB|F1PNI9 - symbol:SUPV3L1 "Uncharacterized protei... 1070 3.0e-108 1
RGD|1305565 - symbol:Supv3l1 "suppressor of var1, 3-like ... 1053 1.9e-106 1
UNIPROTKB|Q8IYB8 - symbol:SUPV3L1 "ATP-dependent RNA heli... 1051 3.1e-106 1
UNIPROTKB|F1SUG1 - symbol:SUPV3L1 "Uncharacterized protei... 1044 1.7e-105 1
UNIPROTKB|E1BTJ2 - symbol:SUPV3L1 "ATP-dependent RNA heli... 1034 2.0e-104 1
UNIPROTKB|F1NMV4 - symbol:SUPV3L1 "ATP-dependent RNA heli... 1030 5.3e-104 1
UNIPROTKB|Q5ZJT0 - symbol:SUPV3L1 "ATP-dependent RNA heli... 1030 5.3e-104 1
MGI|MGI:2441711 - symbol:Supv3l1 "suppressor of var1, 3-l... 1030 5.3e-104 1
TAIR|locus:2130235 - symbol:ATSUV3 species:3702 "Arabidop... 1022 3.7e-103 1
ZFIN|ZDB-GENE-030131-2838 - symbol:supv3l1 "suppressor of... 1013 3.3e-102 1
FB|FBgn0037232 - symbol:CG9791 species:7227 "Drosophila m... 988 1.5e-99 1
DICTYBASE|DDB_G0278937 - symbol:DDB_G0278937 "ATP-depende... 952 9.7e-99 2
UNIPROTKB|Q295E6 - symbol:GA22038 "ATP-dependent RNA heli... 965 4.1e-97 1
WB|WBGene00007444 - symbol:C08F8.2 species:6239 "Caenorha... 936 4.8e-94 1
UNIPROTKB|Q17828 - symbol:C08F8.2 "ATP-dependent RNA heli... 936 4.8e-94 1
UNIPROTKB|Q61SU7 - symbol:CBG06022 "ATP-dependent RNA hel... 923 1.1e-92 1
UNIPROTKB|A6QP28 - symbol:SUPV3L1 "Uncharacterized protei... 843 3.4e-84 1
UNIPROTKB|G4MUT4 - symbol:MGG_01682 "ATP-dependent RNA he... 739 1.1e-82 2
POMBASE|SPAC637.11 - symbol:rpm2 "mitochondrial ATP-depen... 815 3.2e-81 1
SGD|S000005950 - symbol:SUV3 "ATP-dependent RNA helicase"... 799 1.6e-79 1
CGD|CAL0002663 - symbol:SUV3 species:5476 "Candida albica... 742 3.2e-77 2
UNIPROTKB|Q59TB2 - symbol:SUV3 "Putative uncharacterized ... 742 3.2e-77 2
ASPGD|ASPL0000071675 - symbol:AN4723 species:162425 "Emer... 747 5.1e-74 1
GENEDB_PFALCIPARUM|PFF1140c - symbol:PFF1140c "ATP-depend... 306 1.6e-49 5
UNIPROTKB|C6KT73 - symbol:PFF1140c "ATP dependent DEAD-bo... 306 1.6e-49 5
UNIPROTKB|B1AR60 - symbol:SUPV3L1 "ATP-dependent RNA heli... 423 7.4e-39 1
TIGR_CMR|SPO_1417 - symbol:SPO_1417 "helicase, putative" ... 371 1.4e-30 1
CGD|CAL0003794 - symbol:orf19.1335 species:5476 "Candida ... 112 5.8e-07 3
POMBASE|SPAC6F12.16c - symbol:mtr4 "ATP-dependent RNA hel... 102 1.3e-06 2
UNIPROTKB|E1BMS0 - symbol:LOC100139548 "Uncharacterized p... 107 3.2e-06 2
UNIPROTKB|E2RSD6 - symbol:SKIV2L "Uncharacterized protein... 107 3.2e-06 2
UNIPROTKB|F1RQW4 - symbol:SKIV2L "Uncharacterized protein... 107 3.2e-06 2
UNIPROTKB|F5H7B0 - symbol:SKIV2L "Helicase SKI2W" species... 107 5.7e-06 2
UNIPROTKB|F8VS23 - symbol:SKIV2L "Helicase SKI2W" species... 107 5.7e-06 2
UNIPROTKB|F1LP39 - symbol:Skiv2l "Protein Skiv2l" species... 107 6.1e-06 2
UNIPROTKB|B4DM01 - symbol:SKIV2L "cDNA FLJ57529, highly s... 107 6.1e-06 2
UNIPROTKB|F8VNU1 - symbol:SKIV2L "Helicase SKI2W" species... 107 6.1e-06 2
ASPGD|ASPL0000070749 - symbol:mtr4 species:162425 "Emeric... 99 6.3e-06 2
RGD|1303059 - symbol:Skiv2l "superkiller viralicidic acti... 107 6.5e-06 2
UNIPROTKB|Q15477 - symbol:SKIV2L "Helicase SKI2W" species... 107 8.2e-06 2
SGD|S000003586 - symbol:MTR4 "ATP-dependent 3'-5' RNA hel... 108 8.5e-06 3
UNIPROTKB|G4NH56 - symbol:MGG_03931 "FRQ-interacting RNA ... 114 9.6e-06 2
TAIR|locus:2063648 - symbol:HEN2 "hua enhancer 2" species... 101 1.3e-05 2
UNIPROTKB|G3MYJ7 - symbol:SKIV2L2 "Uncharacterized protei... 93 1.8e-05 2
MGI|MGI:1919448 - symbol:Skiv2l2 "superkiller viralicidic... 97 2.4e-05 2
UNIPROTKB|F1MAH7 - symbol:F1MAH7 "Uncharacterized protein... 97 2.5e-05 2
ZFIN|ZDB-GENE-040426-2854 - symbol:skiv2l2 "superkiller v... 98 3.8e-05 2
POMBASE|SPAC17H9.02 - symbol:SPAC17H9.02 "TRAMP complex A... 94 4.9e-05 2
UNIPROTKB|F1MJX4 - symbol:SKIV2L2 "Uncharacterized protei... 93 5.1e-05 2
UNIPROTKB|F5H7E2 - symbol:SKIV2L2 "Superkiller viralicidi... 93 5.1e-05 2
UNIPROTKB|E2RCI5 - symbol:SKIV2L2 "Uncharacterized protei... 93 6.4e-05 2
UNIPROTKB|P42285 - symbol:SKIV2L2 "Superkiller viralicidi... 93 6.4e-05 2
UNIPROTKB|F1SLL6 - symbol:SKIV2L2 "Uncharacterized protei... 93 6.5e-05 2
SGD|S000004390 - symbol:SKI2 "Ski complex component and p... 113 7.1e-05 3
FB|FBgn0001986 - symbol:l(2)35Df "lethal (2) 35Df" specie... 101 7.9e-05 2
CGD|CAL0002171 - symbol:orf19.6425 species:5476 "Candida ... 105 8.7e-05 3
DICTYBASE|DDB_G0275633 - symbol:DDB_G0275633 "superkiller... 100 0.00012 2
WB|WBGene00012342 - symbol:mtr-4 species:6239 "Caenorhabd... 103 0.00015 3
ZFIN|ZDB-GENE-010430-5 - symbol:skiv2l "superkiller viral... 101 0.00023 3
TAIR|locus:2026001 - symbol:MTR4 "homolog of yeast MTR4" ... 102 0.00028 2
DICTYBASE|DDB_G0277211 - symbol:DDB_G0277211 "superkiller... 99 0.00029 2
FB|FBgn0039117 - symbol:tst "twister" species:7227 "Droso... 102 0.00033 2
GENEDB_PFALCIPARUM|PFF0100w - symbol:PFF0100w "putative A... 109 0.00042 2
ASPGD|ASPL0000004985 - symbol:AN6007 species:162425 "Emer... 100 0.00064 2
UNIPROTKB|Q10701 - symbol:helY "Probable helicase HelY" s... 104 0.00073 2
>TAIR|locus:2151911 [details] [associations]
symbol:AT5G39840 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM;ISS]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] InterPro:IPR001650 InterPro:IPR022192
Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 IPI:IPI00521078
RefSeq:NP_198800.1 UniGene:At.55263 ProteinModelPortal:F4KFV7
SMR:F4KFV7 PRIDE:F4KFV7 EnsemblPlants:AT5G39840.1 GeneID:833980
KEGG:ath:AT5G39840 OMA:KVANMLE ArrayExpress:F4KFV7 Uniprot:F4KFV7
Length = 776
Score = 2626 (929.5 bits), Expect = 3.9e-273, P = 3.9e-273
Identities = 516/781 (66%), Positives = 621/781 (79%)
Query: 20 SRVGALSSNQCFHSVGRCDKWVLEKNQFGLTFDGRKREFSASLIDTVRFHLPSGNTRF-- 77
SRV L S + HS + L + F D F + + VR P + RF
Sbjct: 15 SRVTVLFSTRNLHSFRESESRSLCNSDF----DVPTNRFCSG--NRVRIQFPWNDYRFGC 68
Query: 78 IEL-KARSFCSSVGNEGLVNNGTATKPKVEDVEQESGVNFVQGGEEDKVEVLDDYFDGSV 136
E+ K RSF S+V N G N +D+E+ G EE + L D +G +
Sbjct: 69 FEIGKVRSFSSTVDNNG--EN--------DDIEESVGSESDDYDEEGLINELSDVDEG-L 117
Query: 137 ISDSTMVESVHKNSNQSVRFLHLSTRDPVEVFGELRSTEKGAKINRSDFEVLREVFRFFS 196
++DS + E+ S ++ R L+ DPVE++ ELR +E +K+ S+++ L E+F FF+
Sbjct: 118 LNDSVVAETDEIGS-EAARALNDRYHDPVELYRELRGSEVRSKLQHSEWDSLHEIFGFFA 176
Query: 197 NSGWAANQALAVYIGKSFFPTAAGKFRSYFIKKCPDDVAQYLVWLGPSDDAVKFLFPIFV 256
SGWAANQALA+YIGKSFFPTA KFR +FI+KC +V Q LV +GP+D AVKFLFP+FV
Sbjct: 177 QSGWAANQALAIYIGKSFFPTAVSKFRDFFIEKCGIEVVQDLVRVGPTDVAVKFLFPVFV 236
Query: 257 EFCIEEFPDEIKRFRAMIESADLTKPHTWFPFARVMKRKIIYHCGPTNSGKTYNALQRFM 316
EFCIEEFPDEIKRF++++++ADLTKP TWFPFAR MKRKI+YHCGPTNSGKTYNALQRFM
Sbjct: 237 EFCIEEFPDEIKRFKSIVDTADLTKPATWFPFARAMKRKIVYHCGPTNSGKTYNALQRFM 296
Query: 317 EAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQEKKLVPFSNHIACTVEMVSTDEMYD 376
EAK G+YCSPLRLLAMEVFDKVNALG+YCSLLTGQEKK VPF+NH++CTVEMVSTDE+Y+
Sbjct: 297 EAKNGLYCSPLRLLAMEVFDKVNALGIYCSLLTGQEKKYVPFANHVSCTVEMVSTDELYE 356
Query: 377 VAVIDEIQMMSDACRGYAWTRALLGLMADEIHLCGDPSVLDVVRKICSETGDELHEQHYE 436
VAV+DEIQMM+D RG+AWT+ALLGL ADEIHLCGDPSVLD+VRK+C++TGDEL E+HYE
Sbjct: 357 VAVLDEIQMMADPSRGHAWTKALLGLKADEIHLCGDPSVLDIVRKMCADTGDELVEEHYE 416
Query: 437 RFKPLVVEAKTLLGDLRNVRSGDCVVAFSRREIFEVKMAIEKHTNHHCCVIYGALPPETR 496
RFKPLVVEAKTLLG+L+NV+SGDCVVAFSRREIFEVKMAIEKHTNH CCVIYGALPPETR
Sbjct: 417 RFKPLVVEAKTLLGELKNVKSGDCVVAFSRREIFEVKMAIEKHTNHRCCVIYGALPPETR 476
Query: 497 RQQANLFNDQDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPVPGSQVKQIAG 556
RQQA LFNDQ+NE+DVLVASDAVGMGLNLNIRRVVFYSL+KYNGDKI+PV SQVKQIAG
Sbjct: 477 RQQAKLFNDQENEYDVLVASDAVGMGLNLNIRRVVFYSLNKYNGDKIVPVAASQVKQIAG 536
Query: 557 RAGRRGSIYPDGXXXXXXXXXXXXXIECLKQPFEVVKKVGLFPFFEQVELFAGQLSNYTF 616
RAGRRGS YPDG IECL+QPF+ V KVGLFPFFEQ+ELFA Q+ + F
Sbjct: 537 RAGRRGSRYPDGLTTTLHLEDLNYLIECLQQPFDEVTKVGLFPFFEQIELFAAQVPDMAF 596
Query: 617 CQLLEKFGENCRLDGSYFLCRHDHIKKVANMLEKVQGLSLEDRFNFCFAPVNIRDPKAMY 676
LLE FG++CRLDGSYFLCRHDH+KKVANMLEKV+GLSLEDRFNFCFAPVNIR+P+AM+
Sbjct: 597 SNLLEHFGKHCRLDGSYFLCRHDHVKKVANMLEKVEGLSLEDRFNFCFAPVNIRNPRAMH 656
Query: 677 HLLRFASSYSKNAPVSIAMGMPKGSAKNDAELLDLETKHQVLSMYLWLSHQFKEEVFPYA 736
+L RFASSYS+N PV++AMG+PK SAK+DA+LLDLE++HQ+LSMYLWLS+QF EE FP+
Sbjct: 657 NLYRFASSYSQNMPVNVAMGIPKSSAKSDAQLLDLESRHQILSMYLWLSNQF-EENFPFV 715
Query: 737 KKAEAMATDIAELLGQSLTNANWKPESRQAGKPKLHQQRED-GYDRPRSIIKSYENRKRQ 795
+K EAMAT+IAELLG+SL+ A+WK ES++ K K Q +ED GY+RP S+IK + RK +
Sbjct: 716 EKVEAMATNIAELLGESLSKASWKMESKEE-KVK-GQMKEDRGYERPASLIKLVKKRKDE 773
Query: 796 E 796
+
Sbjct: 774 K 774
>UNIPROTKB|F1PNI9 [details] [associations]
symbol:SUPV3L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR022192
Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
GeneTree:ENSGT00390000003100 OMA:ADMIQHI EMBL:AAEX03002786
Ensembl:ENSCAFT00000021963 Uniprot:F1PNI9
Length = 845
Score = 1070 (381.7 bits), Expect = 3.0e-108, P = 3.0e-108
Identities = 247/609 (40%), Positives = 351/609 (57%)
Query: 215 FPTAAGKFRSYFIKKCPDDVAQYLVWLGPSDDA--VKFLFPIFVEFCIEEFPD-EIKRFR 271
F A FR+Y ++ DV +++ A V LFP F+ + FP E K
Sbjct: 179 FHQAFISFRNYIMQSHSLDVDIHIILNDICFSAAHVDDLFPFFLRHAKQIFPVLECKDDL 238
Query: 272 AMIESADLTKPHTWFPFARVMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRLLA 331
I +DL P W+P AR ++RKII+H GPTNSGKTY+A+Q+++ AK G+YC PL+LLA
Sbjct: 239 RKI--SDLRIPPNWYPEARAIQRKIIFHSGPTNSGKTYHAIQKYLSAKSGVYCGPLKLLA 296
Query: 332 MEVFDKVNALGVYCSLLTGQEKKLV-PFSN---HIACTVEMVSTDEMYDVAVIDEIQMMS 387
E+F+K NA GV C L+TG+E+ V P H+ACTVEM S Y+VAVIDEIQM+
Sbjct: 297 HEIFEKSNAAGVPCDLVTGEERVTVGPDGKQAAHVACTVEMCSVTTPYEVAVIDEIQMIK 356
Query: 388 DACRGYAWTRALLGLMADEIHLCGDPSVLDVVRKICSETGDELHEQHYERFKPLVVEAKT 447
D RG+AWTRALLGL A+E+HLCG+ + +D+V ++ TG+E+ ++Y+R P+ V
Sbjct: 357 DPARGWAWTRALLGLCAEEVHLCGESAAIDLVTELMYTTGEEVEVRNYKRLTPISV-LDH 415
Query: 448 LLGDLRNVRSGDCVVAFSRREIFEVKMAIEKHTNHHCCVIYGALPPETRRQQANLFNDQD 507
L L N+R GDC+V F++ +I+ V IE VIYG+LPP T+ QA FND D
Sbjct: 416 ALESLDNLRPGDCIVCFNKNDIYSVSRQIEIR-GLESAVIYGSLPPGTKLAQAKKFNDPD 474
Query: 508 NEFDVLVASDAVGMGLNLNIRRVVFYSLSK----YNGDKII-PVPGSQVKQIAGRAGRRG 562
+ +LVA+DA+GMGLNL+IRR++FYSL K G+K I P+ SQ QIAGRAGR
Sbjct: 475 DPCKILVATDAIGMGLNLSIRRIIFYSLIKPTINEKGEKEIEPITTSQALQIAGRAGRFS 534
Query: 563 SIYPDGXXXXXXXXXXXXXIECLKQPFEVVKKVGLFPFFEQVELFAGQLSNYTFCQLLEK 622
S Y +G E LK+P +K GL P EQ+E+FA L + T L++
Sbjct: 535 SKYKEGEVTTMNREDLSLLKEILKRPVNPIKAAGLHPTAEQIEMFAYHLPDTTLSNLIDI 594
Query: 623 FGENCRLDGSYFLCRHDHIKKVANMLEKVQGLSLEDRFNFCFAPVNIRDPKAMYHLLRFA 682
F + ++DG YF+C D K A +++ + LSL R+ FC AP+N + P LL+FA
Sbjct: 595 FVDFSQVDGQYFVCNMDDFKFSAELIQHIP-LSLRVRYVFCTAPINKKQPFVCSSLLQFA 653
Query: 683 SSYSKNAPVSIA-----MGMPKGSAKNDAELLDLETKHQVLSMYLWLSHQFKEEVFPYAK 737
YS+N P++ + + P KN +L+DLE H VL +YLWLS++F + +FP A
Sbjct: 654 RQYSRNEPLTFSWLRRYIKWPLLPPKNIKDLMDLEAVHDVLDLYLWLSYRFID-MFPDAN 712
Query: 738 KAEAMATDIAELLGQSLTNANWKPESRQAGKP-KLHQQREDGYDRPRSIIKSYENRKRQE 796
+ ++ ++ + + N + + K L + R +KS R R
Sbjct: 713 FIRDLQKELDGIIQEGVHNITKLIKISETHKLLNLESLSAENQSRLSGALKSQARRMRST 772
Query: 797 KTSLTLHTE 805
KT + TE
Sbjct: 773 KTLGSKATE 781
>RGD|1305565 [details] [associations]
symbol:Supv3l1 "suppressor of var1, 3-like 1 (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0000958 "mitochondrial mRNA
catabolic process" evidence=IEA;ISO;ISS] [GO:0000962 "positive
regulation of mitochondrial RNA catabolic process"
evidence=IEA;ISO;ISS] [GO:0000965 "mitochondrial RNA 3'-end
processing" evidence=IEA;ISO;ISS] [GO:0003677 "DNA binding"
evidence=IEA;ISO;ISS] [GO:0003678 "DNA helicase activity"
evidence=IEA;ISO;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA;ISO;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA;ISO;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO;ISS]
[GO:0005739 "mitochondrion" evidence=ISO;ISS] [GO:0005759
"mitochondrial matrix" evidence=ISO;ISS] [GO:0006310 "DNA
recombination" evidence=IEA;ISO;ISS] [GO:0006401 "RNA catabolic
process" evidence=ISO;ISS] [GO:0030307 "positive regulation of cell
growth" evidence=IEA;ISO;ISS] [GO:0032508 "DNA duplex unwinding"
evidence=ISO;ISS] [GO:0034458 "3'-5' RNA helicase activity"
evidence=IEA;ISO;ISS] [GO:0035945 "mitochondrial ncRNA
surveillance" evidence=IEA;ISO;ISS] [GO:0035946 "mitochondrial mRNA
surveillance" evidence=IEA;ISO;ISS] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA;ISO;ISS] [GO:0045025 "mitochondrial
degradosome" evidence=IEA;ISO;ISS] [GO:0070584 "mitochondrion
morphogenesis" evidence=IEA;ISO;ISS] [GO:0070827 "chromatin
maintenance" evidence=IEA;ISO;ISS] [GO:2000827 "mitochondrial RNA
surveillance" evidence=ISO;ISS] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 RGD:1305565 GO:GO:0005524 GO:GO:0005634 GO:GO:0043066
GO:GO:0030307 GO:GO:0005759 GO:GO:0003677 GO:GO:0042645
GO:GO:0006310 GO:GO:0003725 PROSITE:PS51192 GO:GO:0003678
GO:GO:0004004 GO:GO:0070584 GO:GO:0000958 eggNOG:COG0513
GO:GO:0045025 GO:GO:0000965 GO:GO:0000962 GO:GO:0070827
HOGENOM:HOG000175283 CTD:6832 HOVERGEN:HBG108522 OrthoDB:EOG4SXNBZ
GO:GO:0034458 GO:GO:0035946 GO:GO:0035945 EMBL:BC089883
IPI:IPI00554250 RefSeq:NP_001012480.1 UniGene:Rn.19830
ProteinModelPortal:Q5EBA1 STRING:Q5EBA1 PRIDE:Q5EBA1 GeneID:294385
KEGG:rno:294385 UCSC:RGD:1305565 InParanoid:Q5EBA1 NextBio:638092
ArrayExpress:Q5EBA1 Genevestigator:Q5EBA1 Uniprot:Q5EBA1
Length = 776
Score = 1053 (375.7 bits), Expect = 1.9e-106, P = 1.9e-106
Identities = 248/642 (38%), Positives = 367/642 (57%)
Query: 177 GAKINRS-DFEVLREVF-RFFSNSGWAANQALAVY-IGKSFFPTAAGKFRSYFIKKCPDD 233
GA++ R D ++++ +F+ + A Y + F A FR+Y ++ D
Sbjct: 81 GAELTRPLDKNEVKKILDKFYKRQ--EIQKLSADYGLDARLFHQAFISFRNYIMQSHSLD 138
Query: 234 VAQYLVWLGPSDDA--VKFLFPIFVEFCIEEFPD-EIKRFRAMIESADLTKPHTWFPFAR 290
V ++V A V LFP F+ + FP E K I +DL +P W+P AR
Sbjct: 139 VDIHIVLNDICFSAAHVDDLFPFFLRHAKQIFPVLECKDDLRQI--SDLRRPPNWYPEAR 196
Query: 291 VMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTG 350
++RKII+H GPTNSGKTY+A+QR++ A G+YC PL+LLA E+F+K NA GV C L+TG
Sbjct: 197 AIQRKIIFHSGPTNSGKTYHAIQRYLSATSGVYCGPLKLLAHEIFEKSNAAGVPCDLVTG 256
Query: 351 QEKKLV-PF---SNHIACTVEMVSTDEMYDVAVIDEIQMMSDACRGYAWTRALLGLMADE 406
+E+ V P + H++CTVEM + Y+VAVIDEIQM+ D RG+AWTRALLGL A+E
Sbjct: 257 EERLTVEPEGKQATHVSCTVEMCNVATPYEVAVIDEIQMIRDPARGWAWTRALLGLCAEE 316
Query: 407 IHLCGDPSVLDVVRKICSETGDELHEQHYERFKPLVVEAKTLLGDLRNVRSGDCVVAFSR 466
+HLCG+ + +D+V ++ TG+E+ Q YER P+ V + L L N+R GDC+V FS+
Sbjct: 317 VHLCGESAAIDLVTELLYTTGEEVEVQKYERLTPISVLDRAL-ESLDNLRPGDCIVCFSK 375
Query: 467 REIFEVKMAIEKHTNHHCCVIYGALPPETRRQQANLFNDQDNEFDVLVASDAVGMGLNLN 526
+I+ V IE VIYG+LPP T+ QA FND ++ +LVA+DA+GMGLNL+
Sbjct: 376 NDIYSVSRQIEIR-GLESAVIYGSLPPGTKLAQARKFNDPNDPCKILVATDAIGMGLNLS 434
Query: 527 IRRVVFYSLSKYN----GDKII-PVPGSQVKQIAGRAGRRGSIYPDGXXXXXXXXXXXXX 581
IRR++FYSL K + G+K + P+ SQ QIAGRAGR S + +G
Sbjct: 435 IRRIIFYSLIKPSINEKGEKELEPITTSQALQIAGRAGRFSSHFKEGEVTTMHRDDLALL 494
Query: 582 IECLKQPFEVVKKVGLFPFFEQVELFAGQLSNYTFCQLLEKFGENCRLDGSYFLCRHDHI 641
E L +P + ++ GL P EQ+E+FA L T L++ F + ++DG YF+C D
Sbjct: 495 KEILNRPVDPIQAAGLHPTAEQIEMFAYHLPETTLSNLIDIFVDFAQVDGQYFVCNMDDF 554
Query: 642 KKVANMLEKVQGLSLEDRFNFCFAPVNIRDPKAMYHLLRFASSYSKNAPVSIA-----MG 696
K A +++ + LSL R+ FC AP+N + P LL+FA YS+N P++ A +
Sbjct: 555 KFSAELIQHIP-LSLRVRYVFCTAPINKKQPFVCSSLLQFARQYSRNEPLTFAWLRRYIK 613
Query: 697 MPKGSAKNDAELLDLETKHQVLSMYLWLSHQFKEEVFPYAKKAEAMATDIAELLGQSLTN 756
P KN +L+DLE H V +YLWLS++F + +FP + ++ ++ ++ + + N
Sbjct: 614 WPLLPPKNIKDLMDLEAVHDVFDLYLWLSYRFID-MFPDSSFVRSLQKELDVIIQEGVHN 672
Query: 757 ANWKPESRQAGKPKLHQQREDGYDRPRSIIKSYENRKRQEKT 798
+ ++ K L+ + R KS R R KT
Sbjct: 673 ITKLIKISESHK-LLNLEPSGSQSRLPGASKSPARRTRGTKT 713
>UNIPROTKB|Q8IYB8 [details] [associations]
symbol:SUPV3L1 "ATP-dependent RNA helicase SUPV3L1,
mitochondrial" species:9606 "Homo sapiens" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0045025 "mitochondrial degradosome"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006310 "DNA recombination" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0070827
"chromatin maintenance" evidence=IMP] [GO:0043066 "negative
regulation of apoptotic process" evidence=IMP] [GO:0006401 "RNA
catabolic process" evidence=IMP] [GO:0005759 "mitochondrial matrix"
evidence=IDA] [GO:0032508 "DNA duplex unwinding" evidence=IMP]
[GO:0003678 "DNA helicase activity" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IMP] [GO:2000827 "mitochondrial RNA surveillance"
evidence=IMP] [GO:0035946 "mitochondrial mRNA surveillance"
evidence=IMP] [GO:0035945 "mitochondrial ncRNA surveillance"
evidence=IMP] [GO:0042803 "protein homodimerization activity"
evidence=IPI] [GO:0003725 "double-stranded RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0034458 "3'-5' RNA helicase activity"
evidence=IDA] [GO:0000962 "positive regulation of mitochondrial RNA
catabolic process" evidence=IMP;IDA] [GO:0000965 "mitochondrial RNA
3'-end processing" evidence=IMP] [GO:0030307 "positive regulation
of cell growth" evidence=IMP] [GO:0070584 "mitochondrion
morphogenesis" evidence=IMP] [GO:0000958 "mitochondrial mRNA
catabolic process" evidence=IMP] [GO:0003723 "RNA binding"
evidence=TAS] [GO:0004386 "helicase activity" evidence=TAS]
[GO:0042645 "mitochondrial nucleoid" evidence=IDA]
InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0043066 GO:GO:0030307 GO:GO:0003677 EMBL:CH471083
GO:GO:0042645 GO:GO:0006310 GO:GO:0003725 PROSITE:PS51192
GO:GO:0003678 GO:GO:0004004 GO:GO:0070584 GO:GO:0000958
eggNOG:COG0513 GO:GO:0045025 EMBL:AL596223 GO:GO:0000965
GO:GO:0000962 GO:GO:0070827 HOGENOM:HOG000175283 OMA:ADMIQHI
CTD:6832 HOVERGEN:HBG108522 OrthoDB:EOG4SXNBZ GO:GO:0034458
GO:GO:0035946 GO:GO:0035945 EMBL:AF042169 EMBL:AK290416
EMBL:BC036112 IPI:IPI00412404 RefSeq:NP_003162.2 UniGene:Hs.106469
PDB:3RC3 PDB:3RC8 PDBsum:3RC3 PDBsum:3RC8 ProteinModelPortal:Q8IYB8
SMR:Q8IYB8 IntAct:Q8IYB8 STRING:Q8IYB8 PhosphoSite:Q8IYB8
DMDM:74759699 PaxDb:Q8IYB8 PeptideAtlas:Q8IYB8 PRIDE:Q8IYB8
DNASU:6832 Ensembl:ENST00000359655 GeneID:6832 KEGG:hsa:6832
UCSC:uc001jpe.1 GeneCards:GC10P070939 HGNC:HGNC:11471 HPA:HPA038405
MIM:605122 neXtProt:NX_Q8IYB8 PharmGKB:PA36257 InParanoid:Q8IYB8
ChEMBL:CHEMBL3642 GenomeRNAi:6832 NextBio:26671 ArrayExpress:Q8IYB8
Bgee:Q8IYB8 CleanEx:HS_SUPV3L1 Genevestigator:Q8IYB8 Uniprot:Q8IYB8
Length = 786
Score = 1051 (375.0 bits), Expect = 3.1e-106, P = 3.1e-106
Identities = 233/559 (41%), Positives = 336/559 (60%)
Query: 215 FPTAAGKFRSYFIKKCPDDVAQYLVWLGPSDDAVKF--LFPIFVEFCIEEFPD-EIKRFR 271
F A FR+Y ++ DV ++V A LFP F+ + FP + K
Sbjct: 120 FHQAFISFRNYIMQSHSLDVDIHIVLNDICFGAAHADDLFPFFLRHAKQIFPVLDCKDDL 179
Query: 272 AMIESADLTKPHTWFPFARVMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRLLA 331
I +DL P W+P AR M+RKII+H GPTNSGKTY+A+Q++ AK G+YC PL+LLA
Sbjct: 180 RKI--SDLRIPPNWYPDARAMQRKIIFHSGPTNSGKTYHAIQKYFSAKSGVYCGPLKLLA 237
Query: 332 MEVFDKVNALGVYCSLLTGQEKKLV-PF---SNHIACTVEMVSTDEMYDVAVIDEIQMMS 387
E+F+K NA GV C L+TG+E+ V P ++H++CTVEM S Y+VAVIDEIQM+
Sbjct: 238 HEIFEKSNAAGVPCDLVTGEERVTVQPNGKQASHVSCTVEMCSVTTPYEVAVIDEIQMIR 297
Query: 388 DACRGYAWTRALLGLMADEIHLCGDPSVLDVVRKICSETGDELHEQHYERFKPLVVEAKT 447
D RG+AWTRALLGL A+E+HLCG+P+ +D+V ++ TG+E+ + Y+R P+ V
Sbjct: 298 DPARGWAWTRALLGLCAEEVHLCGEPAAIDLVMELMYTTGEEVEVRDYKRLTPISV-LDH 356
Query: 448 LLGDLRNVRSGDCVVAFSRREIFEVKMAIEKHTNHHCCVIYGALPPETRRQQANLFNDQD 507
L L N+R GDC+V FS+ +I+ V IE VIYG+LPP T+ QA FND +
Sbjct: 357 ALESLDNLRPGDCIVCFSKNDIYSVSRQIEIR-GLESAVIYGSLPPGTKLAQAKKFNDPN 415
Query: 508 NEFDVLVASDAVGMGLNLNIRRVVFYSLSKYN----GDKII-PVPGSQVKQIAGRAGRRG 562
+ +LVA+DA+GMGLNL+IRR++FYSL K + G++ + P+ SQ QIAGRAGR
Sbjct: 416 DPCKILVATDAIGMGLNLSIRRIIFYSLIKPSINEKGERELEPITTSQALQIAGRAGRFS 475
Query: 563 SIYPDGXXXXXXXXXXXXXIECLKQPFEVVKKVGLFPFFEQVELFAGQLSNYTFCQLLEK 622
S + +G E LK+P + ++ GL P EQ+E+FA L + T L++
Sbjct: 476 SRFKEGEVTTMNHEDLSLLKEILKRPVDPIRAAGLHPTAEQIEMFAYHLPDATLSNLIDI 535
Query: 623 FGENCRLDGSYFLCRHDHIKKVANMLEKVQGLSLEDRFNFCFAPVNIRDPKAMYHLLRFA 682
F + ++DG YF+C D K A +++ + LSL R+ FC AP+N + P LL+FA
Sbjct: 536 FVDFSQVDGQYFVCNMDDFKFSAELIQHIP-LSLRVRYVFCTAPINKKQPFVCSSLLQFA 594
Query: 683 SSYSKNAPVSIA-----MGMPKGSAKNDAELLDLETKHQVLSMYLWLSHQFKEEVFPYAK 737
YS+N P++ A + P KN +L+DLE H VL +YLWLS++F + +FP A
Sbjct: 595 RQYSRNEPLTFAWLRRYIKWPLLPPKNIKDLMDLEAVHDVLDLYLWLSYRFMD-MFPDAS 653
Query: 738 KAEAMATDIAELLGQSLTN 756
+ ++ ++ + N
Sbjct: 654 LIRDLQKELDGIIQDGVHN 672
>UNIPROTKB|F1SUG1 [details] [associations]
symbol:SUPV3L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070827 "chromatin maintenance" evidence=IEA]
[GO:0070584 "mitochondrion morphogenesis" evidence=IEA] [GO:0045025
"mitochondrial degradosome" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] [GO:0035946 "mitochondrial mRNA
surveillance" evidence=IEA] [GO:0035945 "mitochondrial ncRNA
surveillance" evidence=IEA] [GO:0034458 "3'-5' RNA helicase
activity" evidence=IEA] [GO:0030307 "positive regulation of cell
growth" evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000965
"mitochondrial RNA 3'-end processing" evidence=IEA] [GO:0000962
"positive regulation of mitochondrial RNA catabolic process"
evidence=IEA] [GO:0000958 "mitochondrial mRNA catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0030307 GO:GO:0003677 GO:GO:0042645 GO:GO:0006310
GO:GO:0003725 GO:GO:0003678 GO:GO:0004004 GO:GO:0070584
GO:GO:0000958 GO:GO:0045025 GO:GO:0000965 GO:GO:0000962
GO:GO:0070827 GeneTree:ENSGT00390000003100 OMA:ADMIQHI CTD:6832
GO:GO:0034458 GO:GO:0035946 GO:GO:0035945 EMBL:CT737222
RefSeq:XP_001928933.1 UniGene:Ssc.16551 Ensembl:ENSSSCT00000011221
GeneID:100155960 KEGG:ssc:100155960 Uniprot:F1SUG1
Length = 789
Score = 1044 (372.6 bits), Expect = 1.7e-105, P = 1.7e-105
Identities = 257/681 (37%), Positives = 375/681 (55%)
Query: 138 SDSTMVESVHKNSNQSVRFLHLSTRDPVEVFGELRSTEKGAKINRS-DFEVLREVF-RFF 195
S S+ K N S+ F+ L+ + G + GA++ R D ++++ +F+
Sbjct: 50 SSSSSASGGSKAPNTSL-FVPLTVKPQ----GPSADGDVGAELTRPLDKNEVKKILDKFY 104
Query: 196 SNSGWAANQALAVY-IGKSFFPTAAGKFRSYFIKKCPDDVAQYLVWLGPSDDA--VKFLF 252
+ A Y + F A FR+Y ++ DV +++ A V LF
Sbjct: 105 KRK--EIQKLGADYGLDARLFHQAFISFRNYIMQSHSLDVDIHIILNDICFSAAHVDDLF 162
Query: 253 PIFVEFCIEEFPD-EIKRFRAMIESADLTKPHTWFPFARVMKRKIIYHCGPTNSGKTYNA 311
P F+ + FP E K I +DL P W+P AR ++RKII+H GPTNSGKTY+A
Sbjct: 163 PFFLRHAKQIFPVLECKDDLRKI--SDLRIPPNWYPEARAIQRKIIFHSGPTNSGKTYHA 220
Query: 312 LQRFMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQEKKLV-PFSN---HIACTVE 367
+Q+++ AK G+YC PL+LLA E+F+K NA GV C L+TG+E+ V P H+ACTVE
Sbjct: 221 IQKYLSAKSGVYCGPLKLLAHEIFEKSNAAGVPCDLVTGEERVTVEPDGKQAAHVACTVE 280
Query: 368 MVSTDEMYDVAVIDEIQMMSDACRGYAWTRALLGLMADEIHLCGDPSVLDVVRKICSETG 427
M S Y+VAVIDEIQM+ D RG+AWTRALLGL A EIHLCG+ + +D+V ++ TG
Sbjct: 281 MCSVTTPYEVAVIDEIQMIKDPARGWAWTRALLGLCAKEIHLCGESAAIDLVTELMYTTG 340
Query: 428 DELHEQHYERFKPLVVEAKTLLGDLRNVRSGDCVVAFSRREIFEVKMAIEKHTNHHCCVI 487
+++ + Y+R P+ V L L N+R GDC+V FS+ +I+ V IE VI
Sbjct: 341 EDVEVRTYKRLTPISV-LDHALESLDNLRPGDCIVCFSKNDIYSVSRQIEIR-GLESAVI 398
Query: 488 YGALPPETRRQQANLFNDQDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYN----GDKI 543
YG+LPP T+ QA FND D+ +LVA+DA+GMGLNL+IRR++FYSL K + G++
Sbjct: 399 YGSLPPGTKLAQAKKFNDPDDPCKILVATDAIGMGLNLSIRRIIFYSLMKPSINEKGERE 458
Query: 544 I-PVPGSQVKQIAGRAGRRGSIYPDGXXXXXXXXXXXXXIECLKQPFEVVKKVGLFPFFE 602
I P+ SQ QIAGRAGR S + +G E L +P + +K GL P E
Sbjct: 459 IEPITTSQALQIAGRAGRFSSKFKEGEVTTMHREDLNLLKEILSRPVDPIKAAGLHPTAE 518
Query: 603 QVELFAGQLSNYTFCQLLEKFGENCRLDGSYFLCRHDHIKKVANMLEKVQGLSLEDRFNF 662
Q+E+FA L + T L++ F + ++DG YF+C D K A +++ + LSL R+ F
Sbjct: 519 QIEMFAYHLPDTTLSNLIDIFVDFSQVDGQYFVCNMDDFKFSAELIQHIP-LSLRVRYVF 577
Query: 663 CFAPVNIRDPKAMYHLLRFASSYSKNAPVSIA-----MGMPKGSAKNDAELLDLETKHQV 717
C AP+N + P LL+FA YS+N P++ + + P KN +L+DLE H V
Sbjct: 578 CTAPINKKQPFVCSSLLQFARQYSRNEPLTFSWLRRYIKWPLLPPKNIKDLMDLEAVHDV 637
Query: 718 LSMYLWLSHQFKEEVFPYAKKAEAMATDIAELLGQSLTNANWKPESRQAGKP-KLHQQRE 776
L +YLWLS++F + +FP A + + ++ + N + + K L
Sbjct: 638 LDLYLWLSYRFID-MFPDASLVRDLQKQLDGIIQDGVHNITKLIKISETHKLLNLEGLSA 696
Query: 777 DGYDRPRSIIKSYENRKRQEK 797
+ R +KS R R K
Sbjct: 697 ERSSRLSGTLKSQARRNRSTK 717
>UNIPROTKB|E1BTJ2 [details] [associations]
symbol:SUPV3L1 "ATP-dependent RNA helicase SUPV3L1,
mitochondrial" species:9031 "Gallus gallus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000958 "mitochondrial mRNA catabolic
process" evidence=IEA] [GO:0000962 "positive regulation of
mitochondrial RNA catabolic process" evidence=IEA] [GO:0000965
"mitochondrial RNA 3'-end processing" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0030307 "positive regulation of
cell growth" evidence=IEA] [GO:0034458 "3'-5' RNA helicase
activity" evidence=IEA] [GO:0035945 "mitochondrial ncRNA
surveillance" evidence=IEA] [GO:0035946 "mitochondrial mRNA
surveillance" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0045025 "mitochondrial degradosome"
evidence=IEA] [GO:0070584 "mitochondrion morphogenesis"
evidence=IEA] [GO:0070827 "chromatin maintenance" evidence=IEA]
InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0030307 GO:GO:0003677 GO:GO:0042645 GO:GO:0006310
GO:GO:0003725 GO:GO:0003678 GO:GO:0004004 GO:GO:0000958
GO:GO:0045025 GO:GO:0000965 GO:GO:0000962 GO:GO:0070827
GeneTree:ENSGT00390000003100 OMA:ADMIQHI GO:GO:0034458
GO:GO:0035946 GO:GO:0035945 EMBL:AADN02028004 EMBL:AADN02028006
EMBL:AADN02027997 EMBL:AADN02027998 EMBL:AADN02027999
EMBL:AADN02028000 EMBL:AADN02028001 EMBL:AADN02028002
EMBL:AADN02028003 EMBL:AADN02028005 IPI:IPI00576512
Ensembl:ENSGALT00000006679 ArrayExpress:E1BTJ2 Uniprot:E1BTJ2
Length = 796
Score = 1034 (369.0 bits), Expect = 2.0e-104, P = 2.0e-104
Identities = 249/667 (37%), Positives = 366/667 (54%)
Query: 164 PVEVFGELRSTEKGAKINR--SDFEVLREVFRFFSNSGWAANQALAVYIGKS--FFPTAA 219
PVE E + GA++ R EVL+ + +F+ Q L G F A
Sbjct: 59 PVEGAAE---EDVGAELTRPLDKGEVLKNLNKFYKRK---EIQRLGTENGLDARLFHQAF 112
Query: 220 GKFRSYFIKKCPDDVAQYLVW----LGPSDDAVKFLFPIFVEFCIEEFPDEIKRFRAMIE 275
FR Y ++ +++ G V LFP F+ + FP + + +
Sbjct: 113 ISFRKYIMESSSVSADLHIILNDICCGAGKGHVDDLFPFFLRHAKQIFP-MLDCMDDLRK 171
Query: 276 SADLTKPHTWFPFARVMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVF 335
+DL P W+P AR ++RKII+H GPTNSGKTY+A+QRF+ AK GIYC PL+LLA E+F
Sbjct: 172 ISDLRLPPNWYPEARAIQRKIIFHAGPTNSGKTYHAIQRFLSAKSGIYCGPLKLLAHEIF 231
Query: 336 DKVNALGVYCSLLTGQEKKLVPF----SNHIACTVEMVSTDEMYDVAVIDEIQMMSDACR 391
K NA V C L+TG+E+ ++HIACT+EM ST+ Y+VAVIDEIQM+ D R
Sbjct: 232 QKSNAANVPCDLVTGEERVYASEDAKQASHIACTIEMCSTNTPYEVAVIDEIQMIRDPAR 291
Query: 392 GYAWTRALLGLMADEIHLCGDPSVLDVVRKICSETGDELHEQHYERFKPLVVEAKTLLGD 451
G+AWTRALLGL A+EIH+CG+ + +D+V ++ TG+E+ ++Y+R PL V L
Sbjct: 292 GWAWTRALLGLCAEEIHVCGEGAAIDLVTELMYTTGEEVEVRNYKRLTPLTV-LDYALES 350
Query: 452 LRNVRSGDCVVAFSRREIFEVKMAIEKHTNHHCCVIYGALPPETRRQQANLFNDQDNEFD 511
L N++ GDC+V FS+ +I+ V IE C VIYG+LPP T+ +QA FND ++
Sbjct: 351 LDNLQPGDCIVCFSKNDIYSVSRQIEAR-GLECAVIYGSLPPGTKLEQAKKFNDPNDPCK 409
Query: 512 VLVASDAVGMGLNLNIRRVVFYSLSK----YNGDKIIP-VPGSQVKQIAGRAGRRGSIYP 566
+LVA+DA+GMGLNL I+R++F S+ K G+K I + SQ QIAGRAGR GS +
Sbjct: 410 ILVATDAIGMGLNLCIKRIIFNSIVKPTVNEKGEKEIDSITTSQALQIAGRAGRFGSSFK 469
Query: 567 DGXXXXXXXXXXXXXIECLKQPFEVVKKVGLFPFFEQVELFAGQLSNYTFCQLLEKFGEN 626
G E L + VK GL P EQ+E+FA L + T L++ F
Sbjct: 470 QGEVTAMHRDDLLQLKEILSEAVPPVKAAGLHPTPEQIEMFAYHLPDATLSNLIDIFVSL 529
Query: 627 CRLDGSYFLCRHDHIKKVANMLEKVQGLSLEDRFNFCFAPVNIRDPKAMYHLLRFASSYS 686
++DG YF+C D K +A+M++ + L+L R+ FC AP+N ++P LL+FA +S
Sbjct: 530 SQVDGLYFVCNIDDFKFLADMIQHIP-LNLRSRYVFCTAPLNRKEPFVCTTLLKFARQFS 588
Query: 687 KNAPVSIAM-----GMPKGSAKNDAELLDLETKHQVLSMYLWLSHQFKEEVFPYAKKAEA 741
+N P++ P KN EL+ LE H V +YLWLS++F + +FP A
Sbjct: 589 RNEPLTFDWLCRHTKWPLAPPKNIKELVHLEAVHDVFDLYLWLSYRFMD-MFPDAALVRD 647
Query: 742 MATDIAELLGQSLTNANWKPESRQAGK-PKLHQQREDGYDRPRS-----IIKSYENRKRQ 795
+ + +++ + N + Q+G P + +G+ R+ + + + K
Sbjct: 648 IQKKLDDIIQIGVCNITKLIRASQSGAAPGAAEVMSEGFPLSRTKRDARTVSDHRDAKSA 707
Query: 796 EKTSLTL 802
E S+ L
Sbjct: 708 EPLSIAL 714
>UNIPROTKB|F1NMV4 [details] [associations]
symbol:SUPV3L1 "ATP-dependent RNA helicase SUPV3L1,
mitochondrial" species:9031 "Gallus gallus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 GeneTree:ENSGT00390000003100 IPI:IPI00818346
EMBL:AADN02028004 EMBL:AADN02028006 EMBL:AADN02027997
EMBL:AADN02027998 EMBL:AADN02027999 EMBL:AADN02028000
EMBL:AADN02028001 EMBL:AADN02028002 EMBL:AADN02028003
EMBL:AADN02028005 Ensembl:ENSGALT00000040774 ArrayExpress:F1NMV4
Uniprot:F1NMV4
Length = 794
Score = 1030 (367.6 bits), Expect = 5.3e-104, P = 5.3e-104
Identities = 249/665 (37%), Positives = 366/665 (55%)
Query: 164 PVEVFGELRSTEKGAKINR--SDFEVLREVFRFFSNSGWAANQALAVYIGKS--FFPTAA 219
PVE E + GA++ R EVL+ + +F+ Q L G F A
Sbjct: 59 PVEGAAE---EDVGAELTRPLDKGEVLKNLNKFYKRK---EIQRLGTENGLDARLFHQAF 112
Query: 220 GKFRSYFIKKCPDDVAQYLVWLGPSDDA--VKFLFPIFVEFCIEEFPDEIKRFRAMIESA 277
FR Y ++ +++ A V LFP F+ + FP + + + +
Sbjct: 113 ISFRKYIMESSSVSADLHIILNDICCGAGHVDDLFPFFLRHAKQIFP-MLDCMDDLRKIS 171
Query: 278 DLTKPHTWFPFARVMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDK 337
DL P W+P AR ++RKII+H GPTNSGKTY+A+QRF+ AK GIYC PL+LLA E+F K
Sbjct: 172 DLRLPPNWYPEARAIQRKIIFHAGPTNSGKTYHAIQRFLSAKSGIYCGPLKLLAHEIFQK 231
Query: 338 VNALGVYCSLLTGQEKKLVPF----SNHIACTVEMVSTDEMYDVAVIDEIQMMSDACRGY 393
NA V C L+TG+E+ ++HIACT+EM ST+ Y+VAVIDEIQM+ D RG+
Sbjct: 232 SNAANVPCDLVTGEERVYASEDAKQASHIACTIEMCSTNTPYEVAVIDEIQMIRDPARGW 291
Query: 394 AWTRALLGLMADEIHLCGDPSVLDVVRKICSETGDELHEQHYERFKPLVVEAKTLLGDLR 453
AWTRALLGL A+EIH+CG+ + +D+V ++ TG+E+ ++Y+R PL V L L
Sbjct: 292 AWTRALLGLCAEEIHVCGEGAAIDLVTELMYTTGEEVEVRNYKRLTPLTV-LDYALESLD 350
Query: 454 NVRSGDCVVAFSRREIFEVKMAIEKHTNHHCCVIYGALPPETRRQQANLFNDQDNEFDVL 513
N++ GDC+V FS+ +I+ V IE C VIYG+LPP T+ +QA FND ++ +L
Sbjct: 351 NLQPGDCIVCFSKNDIYSVSRQIEAR-GLECAVIYGSLPPGTKLEQAKKFNDPNDPCKIL 409
Query: 514 VASDAVGMGLNLNIRRVVFYSLSK----YNGDKIIP-VPGSQVKQIAGRAGRRGSIYPDG 568
VA+DA+GMGLNL I+R++F S+ K G+K I + SQ QIAGRAGR GS + G
Sbjct: 410 VATDAIGMGLNLCIKRIIFNSIVKPTVNEKGEKEIDSITTSQALQIAGRAGRFGSSFKQG 469
Query: 569 XXXXXXXXXXXXXIECLKQPFEVVKKVGLFPFFEQVELFAGQLSNYTFCQLLEKFGENCR 628
E L + VK GL P EQ+E+FA L + T L++ F +
Sbjct: 470 EVTAMHRDDLLQLKEILSEAVPPVKAAGLHPTPEQIEMFAYHLPDATLSNLIDIFVSLSQ 529
Query: 629 LDGSYFLCRHDHIKKVANMLEKVQGLSLEDRFNFCFAPVNIRDPKAMYHLLRFASSYSKN 688
+DG YF+C D K +A+M++ + L+L R+ FC AP+N ++P LL+FA +S+N
Sbjct: 530 VDGLYFVCNIDDFKFLADMIQHIP-LNLRSRYVFCTAPLNRKEPFVCTTLLKFARQFSRN 588
Query: 689 APVSIAM-----GMPKGSAKNDAELLDLETKHQVLSMYLWLSHQFKEEVFPYAKKAEAMA 743
P++ P KN EL+ LE H V +YLWLS++F + +FP A +
Sbjct: 589 EPLTFDWLCRHTKWPLAPPKNIKELVHLEAVHDVFDLYLWLSYRFMD-MFPDAALVRDIQ 647
Query: 744 TDIAELLGQSLTNANWKPESRQAGK-PKLHQQREDGYDRPRS-----IIKSYENRKRQEK 797
+ +++ + N + Q+G P + +G+ R+ + + + K E
Sbjct: 648 KKLDDIIQIGVCNITKLIRASQSGAAPGAAEVMSEGFPLSRTKRDARTVSDHRDAKSAEP 707
Query: 798 TSLTL 802
S+ L
Sbjct: 708 LSIAL 712
>UNIPROTKB|Q5ZJT0 [details] [associations]
symbol:SUPV3L1 "ATP-dependent RNA helicase SUPV3L1,
mitochondrial" species:9031 "Gallus gallus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0000958 "mitochondrial mRNA catabolic process"
evidence=ISS] [GO:0000962 "positive regulation of mitochondrial RNA
catabolic process" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0006401 "RNA catabolic process" evidence=ISS]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISS] [GO:0070584 "mitochondrion morphogenesis"
evidence=ISS] [GO:0070827 "chromatin maintenance" evidence=ISS]
[GO:0003725 "double-stranded RNA binding" evidence=ISS] [GO:0034458
"3'-5' RNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS] [GO:0045025
"mitochondrial degradosome" evidence=ISS] [GO:0035946
"mitochondrial mRNA surveillance" evidence=ISS] [GO:2000827
"mitochondrial RNA surveillance" evidence=ISS] [GO:0035945
"mitochondrial ncRNA surveillance" evidence=ISS] [GO:0000965
"mitochondrial RNA 3'-end processing" evidence=ISS] [GO:0030307
"positive regulation of cell growth" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003677
"DNA binding" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0005759 "mitochondrial matrix" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0043066
GO:GO:0030307 GO:GO:0005759 GO:GO:0003677 GO:GO:0042645
GO:GO:0006310 GO:GO:0003725 PROSITE:PS51192 GO:GO:0003678
GO:GO:0004004 GO:GO:0070584 GO:GO:0000958 eggNOG:COG0513
GO:GO:0045025 GO:GO:0000965 GO:GO:0000962 GO:GO:0070827
HOGENOM:HOG000175283 EMBL:AJ720354 IPI:IPI00818346
RefSeq:NP_001006498.1 UniGene:Gga.22594 ProteinModelPortal:Q5ZJT0
STRING:Q5ZJT0 GeneID:423697 KEGG:gga:423697 CTD:6832
HOVERGEN:HBG108522 OrthoDB:EOG4SXNBZ NextBio:20826130 GO:GO:0034458
GO:GO:0035946 GO:GO:0035945 Uniprot:Q5ZJT0
Length = 794
Score = 1030 (367.6 bits), Expect = 5.3e-104, P = 5.3e-104
Identities = 249/665 (37%), Positives = 366/665 (55%)
Query: 164 PVEVFGELRSTEKGAKINR--SDFEVLREVFRFFSNSGWAANQALAVYIGKS--FFPTAA 219
PVE E + GA++ R EVL+ + +F+ Q L G F A
Sbjct: 59 PVEGAAE---EDVGAELTRPLDKGEVLKNLNKFYKRK---EIQRLGTENGLDARLFHQAF 112
Query: 220 GKFRSYFIKKCPDDVAQYLVWLGPSDDA--VKFLFPIFVEFCIEEFPDEIKRFRAMIESA 277
FR Y ++ +++ A V LFP F+ + FP + + + +
Sbjct: 113 ISFRKYIMESSSVSADLHIILNDICCGAGHVDDLFPFFLRHAKQIFP-MLDCMDDLRKIS 171
Query: 278 DLTKPHTWFPFARVMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDK 337
DL P W+P AR ++RKII+H GPTNSGKTY+A+QRF+ AK GIYC PL+LLA E+F K
Sbjct: 172 DLRLPPNWYPEARAIQRKIIFHAGPTNSGKTYHAIQRFLSAKSGIYCGPLKLLAHEIFQK 231
Query: 338 VNALGVYCSLLTGQEKKLVPF----SNHIACTVEMVSTDEMYDVAVIDEIQMMSDACRGY 393
NA V C L+TG+E+ ++HIACT+EM ST+ Y+VAVIDEIQM+ D RG+
Sbjct: 232 SNAANVPCDLVTGEERVYASEDAKQASHIACTIEMCSTNTPYEVAVIDEIQMIRDPARGW 291
Query: 394 AWTRALLGLMADEIHLCGDPSVLDVVRKICSETGDELHEQHYERFKPLVVEAKTLLGDLR 453
AWTRALLGL A+EIH+CG+ + +D+V ++ TG+E+ ++Y+R PL V L L
Sbjct: 292 AWTRALLGLCAEEIHVCGEGAAIDLVTELMYTTGEEVEVRNYKRLTPLTV-LDYALESLD 350
Query: 454 NVRSGDCVVAFSRREIFEVKMAIEKHTNHHCCVIYGALPPETRRQQANLFNDQDNEFDVL 513
N++ GDC+V FS+ +I+ V IE C VIYG+LPP T+ +QA FND ++ +L
Sbjct: 351 NLQPGDCIVCFSKNDIYSVSRQIEAR-GLECAVIYGSLPPGTKLEQAKKFNDPNDPCKIL 409
Query: 514 VASDAVGMGLNLNIRRVVFYSLSK----YNGDKIIP-VPGSQVKQIAGRAGRRGSIYPDG 568
VA+DA+GMGLNL I+R++F S+ K G+K I + SQ QIAGRAGR GS + G
Sbjct: 410 VATDAIGMGLNLCIKRIIFNSIVKPTVNEKGEKEIDSITTSQALQIAGRAGRFGSSFKQG 469
Query: 569 XXXXXXXXXXXXXIECLKQPFEVVKKVGLFPFFEQVELFAGQLSNYTFCQLLEKFGENCR 628
E L + VK GL P EQ+E+FA L + T L++ F +
Sbjct: 470 EVTAMHRDDLLQLKEILSEAVPPVKAAGLHPTPEQIEMFAYHLPDATLSNLIDIFVSLSQ 529
Query: 629 LDGSYFLCRHDHIKKVANMLEKVQGLSLEDRFNFCFAPVNIRDPKAMYHLLRFASSYSKN 688
+DG YF+C D K +A+M++ + L+L R+ FC AP+N ++P LL+FA +S+N
Sbjct: 530 VDGLYFVCNIDDFKFLADMIQHIP-LNLRSRYVFCTAPLNRKEPFVCTTLLKFARQFSRN 588
Query: 689 APVSIAM-----GMPKGSAKNDAELLDLETKHQVLSMYLWLSHQFKEEVFPYAKKAEAMA 743
P++ P KN EL+ LE H V +YLWLS++F + +FP A +
Sbjct: 589 EPLTFDWLCRHTKWPLAPPKNIKELVHLEAVHDVFDLYLWLSYRFMD-MFPDAALVRDIQ 647
Query: 744 TDIAELLGQSLTNANWKPESRQAGK-PKLHQQREDGYDRPRS-----IIKSYENRKRQEK 797
+ +++ + N + Q+G P + +G+ R+ + + + K E
Sbjct: 648 KKLDDIIQIGVCNITKLIRASQSGAAPGAAEVMSEGFPLSRTKRDARTVSDHRDAKSAEP 707
Query: 798 TSLTL 802
S+ L
Sbjct: 708 LSIAL 712
>MGI|MGI:2441711 [details] [associations]
symbol:Supv3l1 "suppressor of var1, 3-like 1 (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000958 "mitochondrial mRNA catabolic
process" evidence=ISO] [GO:0000962 "positive regulation of
mitochondrial RNA catabolic process" evidence=ISO] [GO:0000965
"mitochondrial RNA 3'-end processing" evidence=ISO] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003678 "DNA helicase activity" evidence=ISO]
[GO:0003725 "double-stranded RNA binding" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005739
"mitochondrion" evidence=ISO;IDA] [GO:0005759 "mitochondrial
matrix" evidence=ISO] [GO:0006310 "DNA recombination" evidence=ISO]
[GO:0006401 "RNA catabolic process" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0030307 "positive
regulation of cell growth" evidence=ISO] [GO:0032508 "DNA duplex
unwinding" evidence=ISO] [GO:0034458 "3'-5' RNA helicase activity"
evidence=ISO] [GO:0035945 "mitochondrial ncRNA surveillance"
evidence=ISO] [GO:0035946 "mitochondrial mRNA surveillance"
evidence=ISO] [GO:0042645 "mitochondrial nucleoid" evidence=ISO]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] [GO:0045025 "mitochondrial degradosome" evidence=ISO]
[GO:0070584 "mitochondrion morphogenesis" evidence=ISO] [GO:0070827
"chromatin maintenance" evidence=ISO] [GO:2000827 "mitochondrial
RNA surveillance" evidence=ISO] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 MGI:MGI:2441711 GO:GO:0005524 GO:GO:0005634
GO:GO:0043066 GO:GO:0030307 GO:GO:0005759 GO:GO:0003677
GO:GO:0042645 GO:GO:0006310 GO:GO:0003725 PROSITE:PS51192
GO:GO:0003678 GO:GO:0004004 GO:GO:0070584 GO:GO:0000958
eggNOG:COG0513 GO:GO:0045025 GO:GO:0000965 GO:GO:0000962
GO:GO:0070827 HOGENOM:HOG000175283 GeneTree:ENSGT00390000003100
OMA:ADMIQHI CTD:6832 HOVERGEN:HBG108522 OrthoDB:EOG4SXNBZ
GO:GO:0034458 GO:GO:0035946 GO:GO:0035945 EMBL:AJ968954
EMBL:BC049796 IPI:IPI00314919 RefSeq:NP_852088.1 UniGene:Mm.235898
ProteinModelPortal:Q80YD1 SMR:Q80YD1 STRING:Q80YD1
PhosphoSite:Q80YD1 PaxDb:Q80YD1 PRIDE:Q80YD1
Ensembl:ENSMUST00000020273 GeneID:338359 KEGG:mmu:338359
UCSC:uc007fhd.1 InParanoid:Q80YD1 NextBio:400135 Bgee:Q80YD1
CleanEx:MM_SUPV3L1 Genevestigator:Q80YD1 Uniprot:Q80YD1
Length = 779
Score = 1030 (367.6 bits), Expect = 5.3e-104, P = 5.3e-104
Identities = 236/600 (39%), Positives = 350/600 (58%)
Query: 177 GAKINRS-DFEVLREVF-RFFSNSGWAANQALAVY-IGKSFFPTAAGKFRSYFIKKCPDD 233
GA++ R D ++++ +F+ + A Y + F A FR+Y ++ D
Sbjct: 81 GAELTRPLDKNEVKKILDKFYKRQ--EIQKLSADYGLDARLFHQAFISFRNYIMQSHSLD 138
Query: 234 VAQYLVWLGPSDDA--VKFLFPIFVEFCIEEFPD-EIKRFRAMIESADLTKPHTWFPFAR 290
V ++V A V LFP F+ + FP E K I +DL P W+P AR
Sbjct: 139 VDIHIVLNDICFSAAHVDDLFPFFLRHAKQIFPVLECKDDLRKI--SDLRIPPNWYPEAR 196
Query: 291 VMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTG 350
+RKII+H GPTNSGKTY+A+QR++ A G+YC PL+LLA E+F+K NA GV C L+TG
Sbjct: 197 ARQRKIIFHSGPTNSGKTYHAIQRYLSATSGVYCGPLKLLAHEIFEKSNAAGVPCDLVTG 256
Query: 351 QEKKLV-PF---SNHIACTVEMVSTDEMYDVAVIDEIQMMSDACRGYAWTRALLGLMADE 406
+E+ V P + H++CTVEM + Y+VAVIDEIQM+ D RG+AWTRALLGL A+E
Sbjct: 257 EERLTVEPEGKQATHVSCTVEMCNVATPYEVAVIDEIQMIRDPARGWAWTRALLGLCAEE 316
Query: 407 IHLCGDPSVLDVVRKICSETGDELHEQHYERFKPLVVEAKTLLGDLRNVRSGDCVVAFSR 466
+HLCG+ + +++V ++ TG+E+ Q YER P+ V L L N++ GDC+V FS+
Sbjct: 317 VHLCGESAAINLVSELLYTTGEEVEVQKYERLTPISV-LDHALESLDNLQPGDCIVCFSK 375
Query: 467 REIFEVKMAIEKHTNHHCCVIYGALPPETRRQQANLFNDQDNEFDVLVASDAVGMGLNLN 526
+I+ V IE VIYG+LPP T+ QA FND ++ +LVA+DA+GMGLNL+
Sbjct: 376 NDIYSVSRQIEIR-GLESAVIYGSLPPGTKLAQARKFNDPNDPCKILVATDAIGMGLNLS 434
Query: 527 IRRVVFYSLSKYN----GDKII-PVPGSQVKQIAGRAGRRGSIYPDGXXXXXXXXXXXXX 581
IRR++FYSL K + G+K + P+ SQ QIAGRAGR S + +G
Sbjct: 435 IRRIIFYSLIKPSINEKGEKELEPITTSQALQIAGRAGRFSSHFKEGQVTTMHRDDLALL 494
Query: 582 IECLKQPFEVVKKVGLFPFFEQVELFAGQLSNYTFCQLLEKFGENCRLDGSYFLCRHDHI 641
+ L +P + ++ GL P EQ+E+FA L T L++ F + ++DG YF+C D
Sbjct: 495 KDILNRPVDPIQAAGLHPTAEQIEMFAYHLPETTLSNLIDIFVDFAQVDGQYFVCNMDDF 554
Query: 642 KKVANMLEKVQGLSLEDRFNFCFAPVNIRDPKAMYHLLRFASSYSKNAPVSIA-----MG 696
K A +++ + LSL R+ FC AP+N + P LL+FA YS+N P++ A +
Sbjct: 555 KFSAELIQHIP-LSLRVRYVFCTAPINKKQPFVCSSLLQFARQYSRNEPLTFAWLRRYIK 613
Query: 697 MPKGSAKNDAELLDLETKHQVLSMYLWLSHQFKEEVFPYAKKAEAMATDIAELLGQSLTN 756
P KN +L+DLE H V +YLWLS++F + +FP + ++ ++ ++ + + N
Sbjct: 614 WPLLPPKNIKDLMDLEAVHDVFDLYLWLSYRFID-MFPDSSLVRSLQKELDAIIQEGVHN 672
>TAIR|locus:2130235 [details] [associations]
symbol:ATSUV3 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM;IDA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016070 "RNA metabolic process" evidence=IDA]
[GO:0009561 "megagametogenesis" evidence=IMP] [GO:0009555 "pollen
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR022192
Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194 SMART:SM00490
GO:GO:0005739 GO:GO:0005524 EMBL:CP002687 GO:GO:0009555
GO:GO:0003676 GO:GO:0009561 GO:GO:0016070 GO:GO:0004004
EMBL:AY139995 EMBL:BT008910 EMBL:AJ132843 IPI:IPI00542855
PIR:T52576 RefSeq:NP_193215.2 UniGene:At.509
ProteinModelPortal:Q9SMX1 SMR:Q9SMX1 PRIDE:Q9SMX1
EnsemblPlants:AT4G14790.1 GeneID:827134 KEGG:ath:AT4G14790
TAIR:At4g14790 InParanoid:Q9SMX1 OMA:ASQKSIC PhylomeDB:Q9SMX1
ProtClustDB:CLSN2687511 Genevestigator:Q9SMX1 Uniprot:Q9SMX1
Length = 571
Score = 1022 (364.8 bits), Expect = 3.7e-103, P = 3.7e-103
Identities = 210/484 (43%), Positives = 301/484 (62%)
Query: 278 DLTKPHTWFPFARVMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDK 337
DLT PHTW+P AR KRK+I H GPTNSGKTY+AL+ ++ G+YC PLRLLA EV +
Sbjct: 73 DLTCPHTWYPIARKKKRKVILHVGPTNSGKTYSALKHLEQSSSGVYCGPLRLLAWEVAKR 132
Query: 338 VNALGVYCSLLTGQEKKLVPFSNHIACTVEMVSTDEMYDVAVIDEIQMMSDACRGYAWTR 397
+N V C L+TGQEK LV + H A TVEM +YD A+IDEIQM+ RG+A+TR
Sbjct: 133 LNKANVPCDLITGQEKDLVEGATHKAVTVEMADVTSVYDCAIIDEIQMVGCKQRGFAFTR 192
Query: 398 ALLGLMADEIHLCGDPSVLDVVRKICSETGDELHEQHYERFKPLVVEAKTLLGDLRNVRS 457
ALLG+ ADE+HLCGDP+V+ +V I TGD++ YER PLV K + + ++++
Sbjct: 193 ALLGIAADELHLCGDPAVVPLVEDILKVTGDDVEVHTYERLSPLV-PLKVPVSSVSSIKT 251
Query: 458 GDCVVAFSRREIFEVKMAIEKHTNHHCCVIYGALPPETRRQQANLFNDQDNEFDVLVASD 517
GDC+V FSR++I+ K IE+ H C V+YG+LPPETR QA FND+ N+FDVLVASD
Sbjct: 252 GDCLVTFSRKDIYAYKKTIERAGKHLCSVVYGSLPPETRTAQATRFNDETNDFDVLVASD 311
Query: 518 AVGMGLNLNIRRVVFYSLSKYNGDKIIPVPGSQVKQIAGRAGRRGSIYPDGXXXXXXXXX 577
A+GMGLNLNI R++F +L KY+G + + S++KQIAGRAGR S +P G
Sbjct: 312 AIGMGLNLNISRIIFSTLQKYDGSETRDLTVSEIKQIAGRAGRFQSKFPIGEVTCLHKED 371
Query: 578 XXXXIECLKQPFEVVKKVGLFPFFEQVELFAGQLSNYTFCQLLEKFGENCRLDGSYFLCR 637
LK P ++++ GLFP F+ + ++ + Q+LE F EN +L +YF+
Sbjct: 372 LPLLHSSLKSPSPILERAGLFPTFDLLSGYSQAHPTHGLYQILEHFVENAKLSSNYFISN 431
Query: 638 HDHIKKVANMLEKVQGLSLEDRFNFCFAPVNIRDPKAMYHLLRFASSYSKNAPVSIAMGM 697
+ + KVA +++++ L L++++ F +PV++ D + L +FA ++SK V + +
Sbjct: 432 VEDMMKVAAIVDELP-LGLQEKYLFVVSPVDVNDEISGQGLAQFAQNFSKAGIVRLREIL 490
Query: 698 PKGSAK---NDAELLDLETKHQVLSMYLWLSHQFKEEVFPYAKKAEAMATDIAELLGQSL 754
K EL +LE+ H+VL +Y+WLS + E+ FP ++ A I LL +
Sbjct: 491 APDRVKVPKTPTELKELESIHKVLDLYVWLSLRL-EDSFP-DREVAASQKSICNLLIEQF 548
Query: 755 TNAN 758
N
Sbjct: 549 LEGN 552
>ZFIN|ZDB-GENE-030131-2838 [details] [associations]
symbol:supv3l1 "suppressor of var1, 3-like 1 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0001889 "liver development" evidence=IMP] [GO:0000958
"mitochondrial mRNA catabolic process" evidence=ISS] [GO:0003677
"DNA binding" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0034458 "3'-5' RNA helicase activity" evidence=ISS] [GO:0070584
"mitochondrion morphogenesis" evidence=ISS] [GO:0070827 "chromatin
maintenance" evidence=ISS] [GO:0030307 "positive regulation of cell
growth" evidence=ISS] [GO:0000965 "mitochondrial RNA 3'-end
processing" evidence=ISS] [GO:0035945 "mitochondrial ncRNA
surveillance" evidence=ISS] [GO:0032508 "DNA duplex unwinding"
evidence=ISS] [GO:0000962 "positive regulation of mitochondrial RNA
catabolic process" evidence=ISS] [GO:0003725 "double-stranded RNA
binding" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005759 "mitochondrial matrix" evidence=ISS]
[GO:0006310 "DNA recombination" evidence=ISS] [GO:0035946
"mitochondrial mRNA surveillance" evidence=ISS] [GO:0045025
"mitochondrial degradosome" evidence=ISS] [GO:0043066 "negative
regulation of apoptotic process" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-2838
GO:GO:0005524 GO:GO:0001889 GO:GO:0003676 GO:GO:0004386
GeneTree:ENSGT00390000003100 OMA:ADMIQHI HOVERGEN:HBG108522
EMBL:BX546482 IPI:IPI00491012 UniGene:Dr.78491
Ensembl:ENSDART00000111774 Uniprot:B8A5H7
Length = 763
Score = 1013 (361.7 bits), Expect = 3.3e-102, P = 3.3e-102
Identities = 235/628 (37%), Positives = 359/628 (57%)
Query: 145 SVHKNSNQSVRFLHLSTRDPVEV-FGELRSTEKGAKINR--SDFEVLREVFRFFSNSGW- 200
S +S+ S R L S P+ V E GA++ + E+L+ + RF+
Sbjct: 46 STRHSSSGSSRPLDTSLFIPLAVKTDEDAEGSVGAELTKPLDKNELLKVLNRFYKRKEMQ 105
Query: 201 --AANQALAVYIGKSFFPTAAGKFRSYFIKKCPDDVAQYLVWLGPSDDA--VKFLFPIFV 256
A++Q L + F A FR Y ++ + +++ A + +FP F+
Sbjct: 106 KLASDQGLDARL----FHQAFVSFRKYVLEMNSLNADLHIILNDICCGAGHIDDIFPYFM 161
Query: 257 EFCIEEFP--DEIKRFRAMIESADLTKPHTWFPFARVMKRKIIYHCGPTNSGKTYNALQR 314
+ FP D I R + +DL P W+P AR ++RKI++H GPTNSGKTY+A++R
Sbjct: 162 RHAKQIFPMLDCIDDLRKI---SDLRVPANWYPEARAIQRKIVFHAGPTNSGKTYHAIKR 218
Query: 315 FMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQEKKLV-PF---SNHIACTVEMVS 370
++EAK G+YC PL+LLA E+++K NA GV C L+TG+E+ V P S HIA T+EM S
Sbjct: 219 YLEAKSGVYCGPLKLLAHEIYEKSNAAGVPCDLVTGEERIFVDPEGKPSGHIASTIEMCS 278
Query: 371 TDEMYDVAVIDEIQMMSDACRGYAWTRALLGLMADEIHLCGDPSVLDVVRKICSETGDEL 430
Y+VAVIDEIQM+ D RG+AWTRALLGL A+EIH+CG+ + +D + ++ TG+E+
Sbjct: 279 VTTPYEVAVIDEIQMIKDPARGWAWTRALLGLCAEEIHVCGEAAAVDFITELMFTTGEEV 338
Query: 431 HEQHYERFKPLVVEAKTLLGDLRNVRSGDCVVAFSRREIFEVKMAIEKHTNHHCCVIYGA 490
+Y+R P + + + L N++ GDC+V FS+ +I+ + IE C VIYG+
Sbjct: 339 EVHNYKRLTPFSI-SNHAVESLDNLKPGDCIVCFSKNDIYSISRQIEIR-GLECAVIYGS 396
Query: 491 LPPETRRQQANLFNDQDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYN----GDKIIP- 545
LPP T+ QA FND D+ +LVA+DA+GMGLNL+IRR++F SL K++ G+K +
Sbjct: 397 LPPGTKLAQAKKFNDPDDPCKILVATDAIGMGLNLSIRRIIFNSLVKHSLNEKGEKEVDT 456
Query: 546 VPGSQVKQIAGRAGRRGSIYPDGXXXXXXXXXXXXXIECLKQPFEVVKKVGLFPFFEQVE 605
+ SQ QIAGRAGR S++ +G E L +P + + GL P EQ+E
Sbjct: 457 ISTSQALQIAGRAGRFSSVFKEGEVTTMHRDDLPVLKEILGKPVDPIATAGLHPTAEQIE 516
Query: 606 LFAGQLSNYTFCQLLEKFGENCRLDGSYFLCRHDHIKKVANMLEKVQGLSLEDRFNFCFA 665
+FA L T L++ F ++DG YF+C D K +A+M++ + L+L R+ FC A
Sbjct: 517 MFAYHLPQATLSNLIDIFVSLSQVDGLYFVCNIDDFKFLADMIQHIP-LNLRSRYVFCTA 575
Query: 666 PVNIRDPKAMYHLLRFASSYSKNAPVSI-----AMGMPKGSAKNDAELLDLETKHQVLSM 720
P+N + P L+FA +S++ P++ + P KN +L+ LE H VL +
Sbjct: 576 PINKKQPFVCTSFLKFARQFSRDEPLTFNWVCRQVNWPLSPPKNIKDLVHLEAVHDVLDL 635
Query: 721 YLWLSHQFKEEVFPYAKKAEAMATDIAE 748
YLWLS++F + +FP + + + ++ E
Sbjct: 636 YLWLSYRFMD-MFPDSNQIREIQKELDE 662
>FB|FBgn0037232 [details] [associations]
symbol:CG9791 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR022192
Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194 SMART:SM00490
EMBL:AE014297 GO:GO:0005524 GO:GO:0005634 GO:GO:0005759
GO:GO:0003677 PROSITE:PS51192 GO:GO:0003678 eggNOG:COG0513
GeneTree:ENSGT00390000003100 OMA:ADMIQHI EMBL:AY058527
RefSeq:NP_649452.3 UniGene:Dm.4174 ProteinModelPortal:Q9VN03
SMR:Q9VN03 IntAct:Q9VN03 MINT:MINT-1742266 STRING:Q9VN03
PaxDb:Q9VN03 EnsemblMetazoa:FBtr0273009 GeneID:40543
KEGG:dme:Dmel_CG9791 UCSC:CG9791-RC FlyBase:FBgn0037232
InParanoid:Q9VN03 OrthoDB:EOG48KPS7 PhylomeDB:Q9VN03
GenomeRNAi:40543 NextBio:819279 Bgee:Q9VN03 Uniprot:Q9VN03
Length = 763
Score = 988 (352.9 bits), Expect = 1.5e-99, P = 1.5e-99
Identities = 232/621 (37%), Positives = 348/621 (56%)
Query: 158 HLSTR-DPVEVFGELRSTEKGAKINRS--DFEVLREVFRFFSN---SGWAANQALAVYIG 211
+LST PV+V + S + G++++ E+L+ + +F L Y+
Sbjct: 48 NLSTLFKPVQVHAYVDSEDVGSELSGKLEKAELLKILNKFTQRREIKSLCNENGLDDYLQ 107
Query: 212 KSFFPTAAGKFRSYFIKKCPDDVAQYLVWLGPSDDA--VKFLFPIFVEFCIEEFPDEIKR 269
+ F G FR + I+ V ++ + + A + +FP F+ FP +
Sbjct: 108 QQAF----GSFRRFCIEAENLPVDLHITFSDITQGAGHIDDIFPYFLRHAKTVFP-HLDC 162
Query: 270 FRAMIESADLTKPHTWFPFARVMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRL 329
+ + +DL +P W+ AR + RKI++H GPTNSGKTY+A++R++ AK G+YC PL+L
Sbjct: 163 MDDLKKISDLRQPANWYSNARAITRKIVFHAGPTNSGKTYHAMERYLSAKTGVYCGPLKL 222
Query: 330 LAMEVFDKVNALGVYCSLLTGQEKKL-----VPFSNHIACTVEMVSTDEMYDVAVIDEIQ 384
LA EV++K N G C L+TG+E+K +P +NH+ACTVEM S + Y+VAVIDEIQ
Sbjct: 223 LATEVYNKANERGTPCDLVTGEERKFGISESLP-ANHVACTVEMTSVNTPYEVAVIDEIQ 281
Query: 385 MMSDACRGYAWTRALLGLMADEIHLCGDPSVLDVVRKICSETGDELHEQHYERFKPLVVE 444
+ D RG+AWTRA LGL+ADE+H+CG+P LD+++KIC TG+ + + Y+R L VE
Sbjct: 282 QIRDPQRGWAWTRAFLGLIADEVHVCGEPGALDLLQKICETTGETVEVRLYDRLTELTVE 341
Query: 445 AKTLLGDLRNVRSGDCVVAFSRREIFEVKMAIEKHTNHHCCVIYGALPPETRRQQANLFN 504
T LG L N+ GDC+V FS+ +I+ V IE VIYG LPP T+ QA FN
Sbjct: 342 -NTALGSLDNIVPGDCIVCFSKHDIYTVSREIEAR-GKEVAVIYGGLPPGTKLAQAAKFN 399
Query: 505 DQDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYN----GDKIIP-VPGSQVKQIAGRAG 559
D N V+VA+DA+GMGLNL+IRR++FYSL K + G++ I + S QIAGRAG
Sbjct: 400 DPANSCKVMVATDAIGMGLNLSIRRIIFYSLIKPSMNERGEREIDTISVSSALQIAGRAG 459
Query: 560 RRGSIYPDGXXXXXXXXXXXXXIECLKQPFEVVKKVGLFPFFEQVELFAGQLSNYTFCQL 619
R + + G L + E +K+ GL P +Q+EL+A L + + L
Sbjct: 460 RFRTQWEHGYVTAFKSEDLQTLQRILARTPEPIKQAGLHPTADQIELYAYHLPSSSLSNL 519
Query: 620 LEKFGENCRLDGS-YFLCRHDHIKKVANMLEKVQGLSLEDRFNFCFAPVNIRDPKAMYHL 678
++ F C +D S YF+C + K +A M++ V L L R+ FC AP+N + P
Sbjct: 520 MDIFVNLCTVDDSLYFMCNIEDFKFLAEMIQHV-ALPLRARYVFCCAPINRKMPFVCSMF 578
Query: 679 LRFASSYSKNAPVSIAM-----GMPKGSAKNDAELLDLETKHQVLSMYLWLSHQFKEEVF 733
L+ A YS+N P++ G P K +L+ LE V+ +YLWLS++F + +F
Sbjct: 579 LKVARQYSRNEPITFDFIKKNCGWPFKLPKTILDLVHLEAVFDVMDLYLWLSYRFMD-LF 637
Query: 734 PYAKKAEAMATDIAELLGQSL 754
P A ++ E++ Q +
Sbjct: 638 PEAAYVRDAQKELDEIIQQGV 658
>DICTYBASE|DDB_G0278937 [details] [associations]
symbol:DDB_G0278937 "ATP-dependent RNA helicase
SUPV3L1, mitochondrial" species:44689 "Dictyostelium discoideum"
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR022192
Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0278937 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000024 GO:GO:0004386 eggNOG:COG0513 RefSeq:XP_641977.1
EnsemblProtists:DDB0218122 GeneID:8621709 KEGG:ddi:DDB_G0278937
InParanoid:Q54XQ3 ProtClustDB:CLSZ2846828 Uniprot:Q54XQ3
Length = 904
Score = 952 (340.2 bits), Expect = 9.7e-99, Sum P(2) = 9.7e-99
Identities = 209/511 (40%), Positives = 306/511 (59%)
Query: 261 EEFPDEIKRFRAMIESADLTKPHTWFPFARVMKRKIIYHCGPTNSGKTYNALQRFMEAKK 320
EE ++ K + + +DL +PH W+ AR KR II H GPTNSGKTYNAL+R ME++
Sbjct: 373 EEDEEDEKNLKIL---SDLREPHKWYTEARKFKRNIILHVGPTNSGKTYNALKRLMESES 429
Query: 321 GIYCSPLRLLAMEVFDKVNALGVYCSLLTGQEKKLVPFSNHIACTVEMVSTDEMYDVAVI 380
G+YC PLRLLA EV+DK+N G+ SL+TGQ + P S H +CT+EMVSTD+M +VAVI
Sbjct: 430 GVYCGPLRLLAHEVYDKMNENGLDTSLMTGQLRINNPNSTHSSCTIEMVSTDKMVEVAVI 489
Query: 381 DEIQMMSDACRGYAWTRALLGLMADEIHLCGDPSVLDVVRKICSETGDELHEQHYERFKP 440
DE Q+MSD RG +WTRA+LG+ A E+HLCGD + +++V+KIC TGD L +YER
Sbjct: 490 DEFQLMSDTIRGQSWTRAILGIPAVELHLCGDNTAIELVKKICEITGDTLTINNYERLST 549
Query: 441 LVVEAKTLLGDLRNVRSGDCVVAFSRREIFEVKMAIEKHTNHHCCVIYGALPPETRRQQA 500
LV++ + + + +++ GDC++ F +++I K +EK C V+YG+LPP TR QQA
Sbjct: 550 LVIDEEPI-ASMGDIKKGDCLICFKKKDIIFYKNYLEKQ-GLKCAVVYGSLPPTTRVQQA 607
Query: 501 NLFNDQDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPVPGSQVKQIAGRAGR 560
LFN D DVL+A+DA+GMGLNLNI RV+F +L KY+G+ + S+VKQIAGRAGR
Sbjct: 608 KLFNT-DESVDVLIATDAIGMGLNLNIGRVIFLTLKKYDGEVDRELYASEVKQIAGRAGR 666
Query: 561 RGSIYPDGXXXXXXXXXXXXXIECLKQPFEVVKKVGLFPFFEQVELFA--GQLSNYTFCQ 618
G+ YP G + + P + + G+ P +Q+E F+ Q N F +
Sbjct: 667 FGTKYPVGSVTTFTRKDLAKIRKDWQSPNIISDRAGISPLSQQIEKFSLLPQCKNLKFSE 726
Query: 619 LLEKFGENCRLDGSYFLCRHDHIKKVANMLEKVQGLSLEDRFNFCFAPV-NIRDPKAMYH 677
+L +F EN +D YFL +A + + +S++D+F F P+ N ++ H
Sbjct: 727 VLTEFMENTNIDKHYFLGNFQEFITIAQITDFTT-MSVKDKFLFSQCPLSNSKNEIPTSH 785
Query: 678 LLRFASSYSKNAPVSIAMGMPK------------GSAKNDAELLD-LETKHQVLSMYLWL 724
+++A YSK+ V++ + K K +E L LE+ + V +YLWL
Sbjct: 786 YIKYALGYSKDRKVNLGFDIDKINNAEKRFNESPDDTKKFSEYLSTLESYYSVTDIYLWL 845
Query: 725 SHQFKEEVFPYAKKAEAMATDIAELLGQSLT 755
S+ F F K A +++EL+ Q ++
Sbjct: 846 SNYFPTH-FIQVKNA----IELSELISQRIS 871
Score = 48 (22.0 bits), Expect = 9.7e-99, Sum P(2) = 9.7e-99
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 91 NEGLVNNGTATKPKVEDVEQESGVNFVQGGEEDKVEVLDDYFD 133
N+ + N K KV D E+E N + E ++ E DD D
Sbjct: 333 NKNKIENEENEKVKVSDQEKEEKENDEENDEYEEDEDEDDEED 375
Score = 45 (20.9 bits), Expect = 2.0e-98, Sum P(2) = 2.0e-98
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 102 KPKVEDVEQESGVNFVQGGEEDKVEVLD 129
K K +++++ N ++ E +KV+V D
Sbjct: 322 KEKEQEIKRNKNKNKIENEENEKVKVSD 349
>UNIPROTKB|Q295E6 [details] [associations]
symbol:GA22038 "ATP-dependent RNA helicase SUV3 homolog,
mitochondrial" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005759 "mitochondrial
matrix" evidence=ISS] [GO:0032508 "DNA duplex unwinding"
evidence=ISS] InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271
Pfam:PF12513 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005759 GO:GO:0003677 EMBL:CM000070
PROSITE:PS51192 GO:GO:0003678 eggNOG:COG0513 OMA:ADMIQHI
OrthoDB:EOG48KPS7 RefSeq:XP_001359616.1 ProteinModelPortal:Q295E6
GeneID:4802755 KEGG:dpo:Dpse_GA22038 FlyBase:FBgn0082022
InParanoid:Q295E6 Uniprot:Q295E6
Length = 762
Score = 965 (344.8 bits), Expect = 4.1e-97, P = 4.1e-97
Identities = 239/669 (35%), Positives = 358/669 (53%)
Query: 146 VHKNSNQSVRFLH---LSTR-DPVEVFGELRSTEKGA----KINRSDF-EVLREVFRFFS 196
+H+ QS R H +ST PV+V + + G+ K+ +S+ ++L + +
Sbjct: 33 LHRAPPQSSRKKHETNVSTLFKPVQVQANVDCEDVGSELVGKLEKSELLKILNKFTQRRE 92
Query: 197 NSGWAANQALAVYIGKSFFPTAAGKFRSYFIKKCPDDVAQYLVWLGPSDDA--VKFLFPI 254
+ L Y+ + F G FR Y I+ V ++++ A + +FP
Sbjct: 93 TKSLCSENGLDSYLQQQAF----GSFRRYCIEAENLPVDLHIIFSDIMQGAGHIDDIFPY 148
Query: 255 FVEFCIEEFPDEIKRFRAMIESADLTKPHTWFPFARVMKRKIIYHCGPTNSGKTYNALQR 314
F+ FP + + + +DL +P W+ AR + RKI++H GPTNSGKTY+A++R
Sbjct: 149 FLRHAKTVFP-HLDCMDDLKKISDLRQPANWYTNARALTRKIVFHSGPTNSGKTYHAMER 207
Query: 315 FMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQEKKL-----VPFSNHIACTVEMV 369
++ AK G+YC PL+LLA EV++K N G C L+TG+E+K P +NH+ACTVEM
Sbjct: 208 YLSAKTGVYCGPLKLLATEVYNKANERGTPCDLVTGEERKFGISDNSP-ANHVACTVEMT 266
Query: 370 STDEMYDVAVIDEIQMMSDACRGYAWTRALLGLMADEIHLCGDPSVLDVVRKICSETGDE 429
S + Y+VAVIDEIQ + D RG+AWTRA LGL+ADE+H+CG+ L++++KIC TG+
Sbjct: 267 SVNTPYEVAVIDEIQQIRDPQRGWAWTRAFLGLIADEVHVCGEAGALELLQKICETTGET 326
Query: 430 LHEQHYERFKPLVVEAKTLLGDLRNVRSGDCVVAFSRREIFEVKMAIEKHTNHHCCVIYG 489
+ + Y+R L VE + LG L NV GDC+V FS+ +I+ V IE VIYG
Sbjct: 327 VEVRRYDRLTELTVE-DSALGSLDNVMPGDCIVCFSKHDIYTVSREIEAR-GKEVAVIYG 384
Query: 490 ALPPETRRQQANLFNDQDNEFDVLVASDAVGMGLNLNIRRVVFYSLSK----YNGDKIIP 545
LPP T+ QA FND N V+VA+DA+GMGLNL+IRR++FYSL K G++ I
Sbjct: 385 GLPPGTKLAQAAKFNDPANSCKVMVATDAIGMGLNLSIRRIIFYSLVKPTMNERGEREID 444
Query: 546 -VPGSQVKQIAGRAGRRGSIYPDGXXXXXXXXXXXXXIECLKQPFEVVKKVGLFPFFEQV 604
+ S QIAGRAGR + + G L Q E +K+ GL P +Q+
Sbjct: 445 TISVSSALQIAGRAGRFRTQWEHGYVTAFKSEDLQTLQRILAQTPEPLKQAGLHPTADQI 504
Query: 605 ELFAGQLSNYTFCQLLEKFGENCRLDGS-YFLCRHDHIKKVANMLEKVQGLSLEDRFNFC 663
EL+A L N + L++ F C +D S YF+C + K +A M++ V L L R+ FC
Sbjct: 505 ELYAYHLPNSSLSNLMDIFVNLCTVDDSLYFMCNIEDFKFLAEMIQHVP-LPLRARYVFC 563
Query: 664 FAPVNIRDPKAMYHLLRFASSYSKNAPVSIAM-----GMPKGSAKNDAELLDLETKHQVL 718
AP+N + P L+ A YS+N P++ G P K +L+ LE+ V+
Sbjct: 564 CAPINRKMPFVCSMFLKIARQYSRNEPITFEFIKSNCGWPFKLPKTILDLVHLESVFDVM 623
Query: 719 SMYLWLSHQFKEEVFPYAKKAEAMATDIAELLGQS---LTNANWKPESRQAGK-PKLHQQ 774
+Y ++ ++FP A ++ E++ Q +T E+ Q G+ P +
Sbjct: 624 DLYRFM------DLFPEAGNVREAQKELDEIIQQGVFQITRLLKNTEASQEGETPNYSMR 677
Query: 775 REDGYDRPR 783
R PR
Sbjct: 678 RVTHVKEPR 686
>WB|WBGene00007444 [details] [associations]
symbol:C08F8.2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0005759 GO:GO:0003677 GO:GO:0000003 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 eggNOG:COG0513
EMBL:Z73103 HOGENOM:HOG000175283 PIR:T19103 RefSeq:NP_001040911.1
RefSeq:NP_001040912.1 UniGene:Cel.20693 ProteinModelPortal:Q17828
SMR:Q17828 STRING:Q17828 PaxDb:Q17828 EnsemblMetazoa:C08F8.2a
GeneID:178022 KEGG:cel:CELE_C08F8.2 UCSC:C08F8.2a CTD:178022
WormBase:C08F8.2a WormBase:C08F8.2b GeneTree:ENSGT00390000003100
InParanoid:Q17828 OMA:ADMIQHI NextBio:899396 Uniprot:Q17828
Length = 721
Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
Identities = 207/545 (37%), Positives = 317/545 (58%)
Query: 249 KFLFPIFVEFCIEEFPDEIKRFRAMIESADLTKPHTWFPFARVMKRKIIYHCGPTNSGKT 308
+ L+P F++ + FP ++ + +DLT+PH W+P AR + RKI +H GPTNSGKT
Sbjct: 145 EMLYPFFLDHAKQVFP-HLEAMDDLRIISDLTRPHNWYPEARSVTRKIFFHAGPTNSGKT 203
Query: 309 YNALQRFMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQEKKLVPF----SNHIAC 364
Y+AL+RF EAK ++C PL+LLA EVF + N LG+ C L+TG+E++ S H++
Sbjct: 204 YHALKRFGEAKSAVFCGPLKLLAAEVFHRTNELGIPCDLVTGEERRFAKDNHHPSQHLSS 263
Query: 365 TVEMVSTDEMYDVAVIDEIQMMSDACRGYAWTRALLGLMADEIHLCGDPSVLDVVRKICS 424
TVEM+ST +VAVIDEIQM+ D RG+AWTRALLG ADEIHLCG+P+ +D+V+K+
Sbjct: 264 TVEMLSTQMRVEVAVIDEIQMLRDEQRGWAWTRALLGAAADEIHLCGEPAAIDIVKKLLE 323
Query: 425 ETGDELHEQHYERFKPLVVEAKTLLGDLRNVRSGDCVVAFSRREIFEVKMAIEKHTNHHC 484
G+ + ++YER PL + K + N+ GDC+V FS+R IF +E++
Sbjct: 324 PIGETVEVRYYERKSPLAIADKAI-ESYSNIEPGDCIVCFSKRSIFFNSKKLEEN-GIKP 381
Query: 485 CVIYGALPPETRRQQANLFNDQDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYNGDKII 544
VIYG LPP T+ QA FND D+E +VLVA+DA+GMGLNLNIRRV+F S ++ +++
Sbjct: 382 AVIYGDLPPGTKLAQAAKFNDPDDECNVLVATDAIGMGLNLNIRRVIFNSCTRQT--ELL 439
Query: 545 PVPGSQVKQIAGRAGRRGSIYPDGXXXXXXXXXXXXXIECLKQPFEVVKKVGLFPFFEQV 604
P + QIAGRAGR G+ Y +G L + E + VG+ P ++Q+
Sbjct: 440 PTYAAL--QIAGRAGRFGTAYANGVATTMRKEDLGTLKAILSEKIEPIANVGIAPTYDQI 497
Query: 605 ELFAGQLSNYTFCQLLEKFGENCRLDGSYFLCRHDHIKKVANMLEKVQGLSLEDRFNFCF 664
E F+ L +F +LL+ F C + +F+C ++++A +++++ L L+ R+ FC
Sbjct: 498 ETFSFHLPQASFVRLLDLFVSVCSVSDHFFICTVYDMRELAVLIDQIP-LPLKVRYTFCT 556
Query: 665 APVNIRDPKAMYHLLRFASSYSKNAPVSIA-----MGMPKGSAKNDAELLDLETKHQVLS 719
+P+N D + ++ A +S ++ + P A EL LE +++L
Sbjct: 557 SPLNTEDKRTSAVFVKMARRFSTGQALTYEWLIDMLEWPPKPATTLNELSLLEQNYEILD 616
Query: 720 MYLWLSHQFKE------EVFPYAKKAEAMATDIAELLGQSLTNANWKPESRQAGKPKLHQ 773
Y+WLS +F + V +K ++M + E SL + ES+ AG K +
Sbjct: 617 QYMWLSMRFPDMLPDEPRVREASKHLDSMIQEGVESF-MSLLSVG-ATESKAAGSSKSSE 674
Query: 774 -QRED 777
+RE+
Sbjct: 675 GKREN 679
>UNIPROTKB|Q17828 [details] [associations]
symbol:C08F8.2 "ATP-dependent RNA helicase SUV3 homolog,
mitochondrial" species:6239 "Caenorhabditis elegans" [GO:0032508
"DNA duplex unwinding" evidence=ISS] [GO:0005759 "mitochondrial
matrix" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0005759 GO:GO:0003677 GO:GO:0000003
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
eggNOG:COG0513 EMBL:Z73103 HOGENOM:HOG000175283 PIR:T19103
RefSeq:NP_001040911.1 RefSeq:NP_001040912.1 UniGene:Cel.20693
ProteinModelPortal:Q17828 SMR:Q17828 STRING:Q17828 PaxDb:Q17828
EnsemblMetazoa:C08F8.2a GeneID:178022 KEGG:cel:CELE_C08F8.2
UCSC:C08F8.2a CTD:178022 WormBase:C08F8.2a WormBase:C08F8.2b
GeneTree:ENSGT00390000003100 InParanoid:Q17828 OMA:ADMIQHI
NextBio:899396 Uniprot:Q17828
Length = 721
Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
Identities = 207/545 (37%), Positives = 317/545 (58%)
Query: 249 KFLFPIFVEFCIEEFPDEIKRFRAMIESADLTKPHTWFPFARVMKRKIIYHCGPTNSGKT 308
+ L+P F++ + FP ++ + +DLT+PH W+P AR + RKI +H GPTNSGKT
Sbjct: 145 EMLYPFFLDHAKQVFP-HLEAMDDLRIISDLTRPHNWYPEARSVTRKIFFHAGPTNSGKT 203
Query: 309 YNALQRFMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQEKKLVPF----SNHIAC 364
Y+AL+RF EAK ++C PL+LLA EVF + N LG+ C L+TG+E++ S H++
Sbjct: 204 YHALKRFGEAKSAVFCGPLKLLAAEVFHRTNELGIPCDLVTGEERRFAKDNHHPSQHLSS 263
Query: 365 TVEMVSTDEMYDVAVIDEIQMMSDACRGYAWTRALLGLMADEIHLCGDPSVLDVVRKICS 424
TVEM+ST +VAVIDEIQM+ D RG+AWTRALLG ADEIHLCG+P+ +D+V+K+
Sbjct: 264 TVEMLSTQMRVEVAVIDEIQMLRDEQRGWAWTRALLGAAADEIHLCGEPAAIDIVKKLLE 323
Query: 425 ETGDELHEQHYERFKPLVVEAKTLLGDLRNVRSGDCVVAFSRREIFEVKMAIEKHTNHHC 484
G+ + ++YER PL + K + N+ GDC+V FS+R IF +E++
Sbjct: 324 PIGETVEVRYYERKSPLAIADKAI-ESYSNIEPGDCIVCFSKRSIFFNSKKLEEN-GIKP 381
Query: 485 CVIYGALPPETRRQQANLFNDQDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYNGDKII 544
VIYG LPP T+ QA FND D+E +VLVA+DA+GMGLNLNIRRV+F S ++ +++
Sbjct: 382 AVIYGDLPPGTKLAQAAKFNDPDDECNVLVATDAIGMGLNLNIRRVIFNSCTRQT--ELL 439
Query: 545 PVPGSQVKQIAGRAGRRGSIYPDGXXXXXXXXXXXXXIECLKQPFEVVKKVGLFPFFEQV 604
P + QIAGRAGR G+ Y +G L + E + VG+ P ++Q+
Sbjct: 440 PTYAAL--QIAGRAGRFGTAYANGVATTMRKEDLGTLKAILSEKIEPIANVGIAPTYDQI 497
Query: 605 ELFAGQLSNYTFCQLLEKFGENCRLDGSYFLCRHDHIKKVANMLEKVQGLSLEDRFNFCF 664
E F+ L +F +LL+ F C + +F+C ++++A +++++ L L+ R+ FC
Sbjct: 498 ETFSFHLPQASFVRLLDLFVSVCSVSDHFFICTVYDMRELAVLIDQIP-LPLKVRYTFCT 556
Query: 665 APVNIRDPKAMYHLLRFASSYSKNAPVSIA-----MGMPKGSAKNDAELLDLETKHQVLS 719
+P+N D + ++ A +S ++ + P A EL LE +++L
Sbjct: 557 SPLNTEDKRTSAVFVKMARRFSTGQALTYEWLIDMLEWPPKPATTLNELSLLEQNYEILD 616
Query: 720 MYLWLSHQFKE------EVFPYAKKAEAMATDIAELLGQSLTNANWKPESRQAGKPKLHQ 773
Y+WLS +F + V +K ++M + E SL + ES+ AG K +
Sbjct: 617 QYMWLSMRFPDMLPDEPRVREASKHLDSMIQEGVESF-MSLLSVG-ATESKAAGSSKSSE 674
Query: 774 -QRED 777
+RE+
Sbjct: 675 GKREN 679
>UNIPROTKB|Q61SU7 [details] [associations]
symbol:CBG06022 "ATP-dependent RNA helicase SUV3 homolog,
mitochondrial" species:6238 "Caenorhabditis briggsae" [GO:0003677
"DNA binding" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0005759 "mitochondrial matrix" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005759
GO:GO:0003677 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0003678 eggNOG:COG0513 EMBL:HE600909 EnsemblMetazoa:CBG06022
WormBase:CBG06022 HOGENOM:HOG000175283 Uniprot:Q61SU7
Length = 721
Score = 923 (330.0 bits), Expect = 1.1e-92, P = 1.1e-92
Identities = 194/491 (39%), Positives = 298/491 (60%)
Query: 249 KFLFPIFVEFCIEEFPDEIKRFRAMIESADLTKPHTWFPFARVMKRKIIYHCGPTNSGKT 308
+ L+P F++ + FP ++ + +DLT+PH W+P AR + RKI +H GPTNSGKT
Sbjct: 143 EMLYPFFLDHSKQVFP-HLEAMDDLRIISDLTRPHNWYPEARSIIRKIFFHAGPTNSGKT 201
Query: 309 YNALQRFMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQEKKLVPF----SNHIAC 364
Y+AL+RF EAK ++C PL+LLA EVF++ NALG+ C L+TG+E++ S H++
Sbjct: 202 YHALKRFGEAKSAVFCGPLKLLATEVFNRTNALGIPCDLVTGEERRFAKDNHHPSQHLSS 261
Query: 365 TVEMVSTDEMYDVAVIDEIQMMSDACRGYAWTRALLGLMADEIHLCGDPSVLDVVRKICS 424
TVEM+ST +V VIDEIQM+ D RG+AWTRALLG ADEIHLCG+P+ +++V+K+
Sbjct: 262 TVEMLSTQMRVEVVVIDEIQMLRDEQRGWAWTRALLGAAADEIHLCGEPAAINIVKKLLE 321
Query: 425 ETGDELHEQHYERFKPLVVEAKTLLGDLRNVRSGDCVVAFSRREIFEVKMAIEKHTNHHC 484
G+ + ++Y+R PL + A + N+ GDC+V FS+R +F +E++
Sbjct: 322 PIGETVEVRYYDRKSPLTI-ADRAIESYSNIEPGDCIVCFSKRAVFFNSKKLEEN-GIKP 379
Query: 485 CVIYGALPPETRRQQANLFNDQDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYNGDKII 544
VIYG LPP T+ QA FND D+E +VLVA+DA+GMGLNLNIRRV+F S ++ +++
Sbjct: 380 AVIYGDLPPGTKLAQAAKFNDPDDECNVLVATDAIGMGLNLNIRRVIFNSCTRQT--ELL 437
Query: 545 PVPGSQVKQIAGRAGRRGSIYPDGXXXXXXXXXXXXXIECLKQPFEVVKKVGLFPFFEQV 604
P + QIAGRAGR G+ Y +G L + E + VG+ P ++Q+
Sbjct: 438 PTYAAL--QIAGRAGRFGTAYANGVATTMRKEDLGTLKTILAEKVEPITNVGIAPTYDQI 495
Query: 605 ELFAGQLSNYTFCQLLEKFGENCRLDGSYFLCRHDHIKKVANMLEKVQGLSLEDRFNFCF 664
E F+ L +F +LL+ F C + +F+C ++++A ++++V L L+ R+ FC
Sbjct: 496 ETFSFHLPQASFVRLLDLFVSVCSVSDHFFICTVYDMRELAVLIDQVP-LPLKVRYTFCT 554
Query: 665 APVNIRDPKAMYHLLRFASSYSKNAPVSIA--MGM---PKGSAKNDAELLDLETKHQVLS 719
+P+N D + ++ A ++ ++ M M P A +EL LE ++VL
Sbjct: 555 SPLNTDDKRTAAVFVKMARRFATGQALTYEWLMDMLEWPPKPASTLSELSLLEQNYEVLD 614
Query: 720 MYLWLSHQFKE 730
Y+WLS +F +
Sbjct: 615 QYMWLSMRFPD 625
>UNIPROTKB|A6QP28 [details] [associations]
symbol:SUPV3L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070827 "chromatin maintenance" evidence=IEA]
[GO:0070584 "mitochondrion morphogenesis" evidence=IEA] [GO:0045025
"mitochondrial degradosome" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] [GO:0035946 "mitochondrial mRNA
surveillance" evidence=IEA] [GO:0035945 "mitochondrial ncRNA
surveillance" evidence=IEA] [GO:0034458 "3'-5' RNA helicase
activity" evidence=IEA] [GO:0030307 "positive regulation of cell
growth" evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000965
"mitochondrial RNA 3'-end processing" evidence=IEA] [GO:0000962
"positive regulation of mitochondrial RNA catabolic process"
evidence=IEA] [GO:0000958 "mitochondrial mRNA catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0030307 GO:GO:0003677
GO:GO:0042645 GO:GO:0006310 GO:GO:0003725 GO:GO:0003678
GO:GO:0004004 GO:GO:0070584 GO:GO:0000958 eggNOG:COG0513
GO:GO:0045025 GO:GO:0000965 GO:GO:0000962 GO:GO:0070827
HOGENOM:HOG000175283 GeneTree:ENSGT00390000003100 CTD:6832
HOVERGEN:HBG108522 OrthoDB:EOG4SXNBZ GO:GO:0034458 GO:GO:0035946
GO:GO:0035945 EMBL:DAAA02061832 EMBL:BC149119 IPI:IPI00692690
RefSeq:NP_001095332.1 UniGene:Bt.27125 STRING:A6QP28
Ensembl:ENSBTAT00000001386 GeneID:505988 KEGG:bta:505988
InParanoid:A6QP28 OMA:XGVPCDL NextBio:20867398 Uniprot:A6QP28
Length = 535
Score = 843 (301.8 bits), Expect = 3.4e-84, P = 3.4e-84
Identities = 196/459 (42%), Positives = 272/459 (59%)
Query: 177 GAKINRS-DFEVLREVF-RFFSNSGWAANQALAVY-IGKSFFPTAAGKFRSYFIKKCPDD 233
GA++ R D +++V +F+ + A Y + F A FR+Y ++ D
Sbjct: 82 GAELTRPLDKNEVKKVLDKFYKRK--EIQKLSADYGLDARLFHQAFISFRNYIMQSHSLD 139
Query: 234 VAQYLVWLGPSDDA--VKFLFPIFVEFCIEEFPD-EIKRFRAMIESADLTKPHTWFPFAR 290
V +++ A V LFP F+ + FP E K I +DL P W+P AR
Sbjct: 140 VDIHIILNDICFSAAHVDDLFPFFLRHAKQIFPVLECKDDLRKI--SDLRIPPNWYPEAR 197
Query: 291 VMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTG 350
+ RKII+H GPTNSGKTY+A+Q+++ AK G+YC PL+LLA E+F+K NA GV C L+TG
Sbjct: 198 AIHRKIIFHSGPTNSGKTYHAIQKYLSAKSGVYCGPLKLLAHEIFEKSNAAGVPCDLVTG 257
Query: 351 QEKKLV-PFSN---HIACTVEMVSTDEMYDVAVIDEIQMMSDACRGYAWTRALLGLMADE 406
+E+ V P H+ACTVEM S Y+VAVIDEIQM+ D RG+AWTRALLGL A+E
Sbjct: 258 EERVSVDPDGKQAAHVACTVEMCSVTTPYEVAVIDEIQMIKDPARGWAWTRALLGLCAEE 317
Query: 407 IHLCGDPSVLDVVRKICSETGDELHEQHYERFKPLVVEAKTLLGDLRNVRSGDCVVAFSR 466
IHLCG+ + +D+V ++ TG+++ + Y+R P+ V L L N+R GDC+V FS+
Sbjct: 318 IHLCGESAAIDMVTELMYTTGEDVEVRTYKRLTPISV-LDHALESLDNLRPGDCIVCFSK 376
Query: 467 REIFEVKMAIEKHTNHHCCVIYGALPPETRRQQANLFNDQDNEFDVLVASDAVGMGLNLN 526
+I+ V IE VIYG+LPP T+ QA FND D+ +LVA+DA+GMGLNL+
Sbjct: 377 NDIYSVSRQIEIR-GLESAVIYGSLPPGTKLAQAKKFNDPDDPCKILVATDAIGMGLNLS 435
Query: 527 IRRVVFYSLSKYN----GDKII-PVPGSQVKQIAGRAGRRGSIYPDGXXXXXXXXXXXXX 581
IRR++FYSL K + G+K I P+ SQ QIAGRAGR S + +G
Sbjct: 436 IRRIIFYSLMKPSINEKGEKEIEPITTSQALQIAGRAGRFSSKFKEGEVTTMNREDLSLL 495
Query: 582 IECLKQPFEVVKKVGLFPFFEQVELFAGQLSNYTFCQLL 620
E L +P + +K GL P EQ+E+FA L + T L+
Sbjct: 496 KEILNRPVDPIKAAGLHPTAEQIEMFAYHLPDTTLSNLI 534
>UNIPROTKB|G4MUT4 [details] [associations]
symbol:MGG_01682 "ATP-dependent RNA helicase SUV3"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
EMBL:CM001232 RefSeq:XP_003714671.1 ProteinModelPortal:G4MUT4
EnsemblFungi:MGG_01682T0 GeneID:2679359 KEGG:mgr:MGG_01682
Uniprot:G4MUT4
Length = 757
Score = 739 (265.2 bits), Expect = 1.1e-82, Sum P(2) = 1.1e-82
Identities = 145/285 (50%), Positives = 194/285 (68%)
Query: 278 DLTKPHTWFPFARVMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDK 337
D P WFP R M+RKI H GPTNSGKTYNAL+ A G+Y PLRLLA EV+ +
Sbjct: 183 DFQHPTEWFPGTRSMQRKIHLHVGPTNSGKTYNALKALESATTGVYAGPLRLLAHEVYTR 242
Query: 338 VNALGVYCSLLTGQEKKLVPFSNHI--ACTVEMVSTDEMYDVAVIDEIQMMSDACRGYAW 395
+ A G C+LLTG+E++ + +CTVEM + + DVAVIDEIQM++D RG+AW
Sbjct: 243 MVAKGRSCALLTGEEQRWPEDTQSFISSCTVEMAPLNTVVDVAVIDEIQMIADPDRGWAW 302
Query: 396 TRALLGLMADEIHLCGDPSVLDVVRKICSETGDELHEQHYERFKPLVVEAKTLLGDLRNV 455
T+A+LG+ A E+HLCG+ +D+++++ GDE YER PL +L GDL+ +
Sbjct: 303 TQAVLGIQAREVHLCGEERTVDLIKRLAESMGDECIVHQYERLSPLEPMNSSLGGDLKKL 362
Query: 456 RSGDCVVAFSRREIFEVKMAIEKHTNHHCCVIYGALPPETRRQQANLFNDQDNEFDVLVA 515
+ GD VVAFSR + +K IEK T C ++YG+LPPETR +QA LFND DNE+D +VA
Sbjct: 363 QKGDAVVAFSRIGLHALKRGIEKQTGKRCAIVYGSLPPETRAEQAALFNDPDNEYDYIVA 422
Query: 516 SDAVGMGLNLNIRRVVFYSLSKYNGDKIIPVPGSQVKQIAGRAGR 560
SDA+GMGLNL IRRVVF + +K++G + + S++KQI GRAGR
Sbjct: 423 SDAIGMGLNLEIRRVVFDTTNKFDGSERRFLGESEIKQIGGRAGR 467
Score = 109 (43.4 bits), Expect = 1.1e-82, Sum P(2) = 1.1e-82
Identities = 45/201 (22%), Positives = 87/201 (43%)
Query: 585 LKQPFEV----VKKVGLFPFFEQVELFAGQLSNYT-FCQLLEKFGENCRLDGSYFLCRHD 639
+++ FEV +K GL P +E F+ + T +L K E R YF+C D
Sbjct: 509 IQKAFEVEVPPIKAAGLLPPAAIIEKFSSYFAQDTPLSHILLKIREVVRTSDDYFVCNFD 568
Query: 640 HIKKVANMLEKVQGLSLEDRFNFCFAPVNIRDPKAMYHLLRFASSYSKNAPVSI------ 693
+ A++++ + + DR AP++ + + M + S +S+
Sbjct: 569 DWIEAADIIQAFP-MPISDRLVLLSAPLDYKTKEFMRICAKCVSELKDGHLLSLDGLELE 627
Query: 694 AMGMPK---GSAKNDAELLDLETKHQVLSMYLWLSHQFKEEVFPYAKKAEAMATDIAELL 750
+ + + +L LET H+ L +YLWLS+++ + VF A + + E +
Sbjct: 628 VLDVDDTCFNKYRAQEQLNKLETLHKCLILYLWLSYRY-QGVFVSQDLAFHAKSLVEEKI 686
Query: 751 GQSLTNANWKPESRQAGKPKL 771
+ L +++ + R K K+
Sbjct: 687 RERLDKVDFRLDDRLEQKRKI 707
>POMBASE|SPAC637.11 [details] [associations]
symbol:rpm2 "mitochondrial ATP-dependent RNA helicase
Rpm2" species:4896 "Schizosaccharomyces pombe" [GO:0000965
"mitochondrial RNA 3'-end processing" evidence=IMP] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005759
"mitochondrial matrix" evidence=ISS] [GO:0006401 "RNA catabolic
process" evidence=IMP] InterPro:IPR001650 InterPro:IPR022192
Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194 SMART:SM00490
PomBase:SPAC637.11 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005759 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 GO:GO:0000965 PIR:T39003 RefSeq:NP_594629.1
ProteinModelPortal:O94445 STRING:O94445 EnsemblFungi:SPAC637.11.1
GeneID:2543678 KEGG:spo:SPAC637.11 OrthoDB:EOG4X6GJ1
NextBio:20804684 Uniprot:O94445
Length = 647
Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
Identities = 188/484 (38%), Positives = 274/484 (56%)
Query: 263 FPDEIKRFRAMIES--ADLTKPHTWFPFARVMKRKIIYHCGPTNSGKTYNALQRFMEAKK 320
+ + I+ R ++ DL P W+P AR ++R II H GPTNSGKT+ AL+R KK
Sbjct: 139 YQERIEETRPDLQKQLTDLKNPIEWYPGARKLRRHIIMHVGPTNSGKTHRALERLKTCKK 198
Query: 321 GIYCSPLRLLAMEVFDKVNALGVYCSLLTGQE-KKLVPFSNHIACTVEMVSTDEMYDVAV 379
GI+ PLRLLA E+++++ A G+ C+L TG+E + PF ++CTVEM + +DVAV
Sbjct: 199 GIFAGPLRLLAHEIYNRLQANGIACNLYTGEEIRNDYPFPQVVSCTVEMCNLSTTFDVAV 258
Query: 380 IDEIQMMSDACRGYAWTRALLGLMADEIHLCGDPSVLDVVRKICSETGDELHEQHYERFK 439
IDEIQMM+D RGYAWT+ LLGL A EIHLCG+ SV+ +VR I T D+ YER
Sbjct: 259 IDEIQMMADPSRGYAWTQCLLGLQAKEIHLCGEESVVKLVRSIAKMTQDDFTVYRYERLN 318
Query: 440 PLVVEAKTLLGDLRNVRSGDCVVAFSRREIFEVKMAIEKHTNHHCCVIYGALPPETRRQQ 499
PL V K+L G L ++ GDCVVAFSR+ IF +K I++ VIYG+LPPE R QQ
Sbjct: 319 PLHVAEKSLNGKLSELKDGDCVVAFSRKNIFTLKSKIDQALGKKSAVIYGSLPPEVRNQQ 378
Query: 500 ANLFNDQDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPVPGSQVKQIAGRAG 559
A+LFN + ++ ++L+ASDA+GMGLNL ++R+VF L K++G I +P Q+KQIAGRAG
Sbjct: 379 ASLFNSKSSDENILLASDAIGMGLNLGVKRIVFSDLKKFSGVSTIDIPVPQIKQIAGRAG 438
Query: 560 RR---GSIYPDGXXXXXXXXXXXXXIECLKQPFEVVKK--VGLFP--FFEQVELFAGQLS 612
R GS G + P + + +G FF + LF+ +
Sbjct: 439 RHNPNGSKQSAGIVTTLYQKDFAKLNRAMNLPTKNLFNACIGAKDDLFFRYLSLFSDDIP 498
Query: 613 NYTFCQLLEKFGENCR----LDG--SYFLCRH-DHIKKVANMLEKVQGLSLEDRFNFCFA 665
K + +G S F+ + DHIK + + +K++ L + +A
Sbjct: 499 QKLIFDRYFKLAKTTTPFVVSEGALSTFIIEYLDHIKGLT-IKDKIKLLGCPVLKHSKYA 557
Query: 666 PVNIRDPKAMYHLLRFASSYS-KNAPVSIAMGMPKGSAKNDAELLDLETKHQVLSMYLWL 724
P+ IR+ + + Y K+ P+ I + +G + EL LE H+++ Y+W
Sbjct: 558 PLFIREIGCVIAQGKRLQIYDLKSVPLEI---LERGIPTTETELQQLEQLHKLIVAYMWA 614
Query: 725 SHQF 728
S ++
Sbjct: 615 SIRY 618
>SGD|S000005950 [details] [associations]
symbol:SUV3 "ATP-dependent RNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000957 "mitochondrial RNA catabolic process" evidence=IMP]
[GO:0006264 "mitochondrial DNA replication" evidence=IMP]
[GO:0000262 "mitochondrial chromosome" evidence=IDA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0045025
"mitochondrial degradosome" evidence=IDA] [GO:0008859
"exoribonuclease II activity" evidence=IDA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000372 "Group I intron splicing"
evidence=IGI] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513
PROSITE:PS51194 SMART:SM00490 SGD:S000005950 GO:GO:0005524
GO:GO:0005759 GO:GO:0003723 EMBL:BK006949 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 GO:GO:0000372
eggNOG:COG0513 EMBL:U36624 GO:GO:0006264 GO:GO:0045025
GO:GO:0000957 GeneTree:ENSGT00390000003100 OrthoDB:EOG4X6GJ1
EMBL:M91167 PIR:S63453 RefSeq:NP_015296.1 ProteinModelPortal:P32580
SMR:P32580 DIP:DIP-6302N IntAct:P32580 MINT:MINT-698589
STRING:P32580 PaxDb:P32580 PeptideAtlas:P32580 EnsemblFungi:YPL029W
GeneID:856078 KEGG:sce:YPL029W CYGD:YPL029w HOGENOM:HOG000248220
OMA:GTIEMIP NextBio:981083 Genevestigator:P32580 GermOnline:YPL029W
Uniprot:P32580
Length = 737
Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
Identities = 187/476 (39%), Positives = 271/476 (56%)
Query: 276 SADLTKPHTWFPFARVMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVF 335
+ D+T P WFP AR ++R II H GPTNSGKTY ALQ+ +G Y PLRLLA EV+
Sbjct: 214 NVDITNPAEWFPEARKIRRHIIMHIGPTNSGKTYRALQKLKSVDRGYYAGPLRLLAREVY 273
Query: 336 DKVNALGVYCSLLTGQE--KKLVPFSNHIACT---VEMVSTDEMYDVAVIDEIQMMSDAC 390
D+ +A + C+LLTG+E + L N T VEMV ++ +DV V+DEIQMMSD
Sbjct: 274 DRFHAEKIRCNLLTGEEVIRDLDDRGNSAGLTSGTVEMVPINQKFDVVVLDEIQMMSDGD 333
Query: 391 RGYAWTRALLGLMADEIHLCGDPSVLDVVRKICSETGDELHEQHYERFKPLVVEAKTLLG 450
RG+AWT ALLG+++ E+HLCG+ SVL +V+ I TGD+L YER L VE K +
Sbjct: 334 RGWAWTNALLGVVSKEVHLCGEKSVLPLVKSIVKMTGDKLTINEYERLGKLSVEEKPIKD 393
Query: 451 DLRNVRSGDCVVAFSRREIFEVKMAIEKHTNHHCCVIYGALPPETRRQQANLFNDQDNEF 510
++ +R GDCVVAFS+++I ++K+ IEK TN VIYG+LPPETR QQA LFN+ E+
Sbjct: 394 GIKGLRKGDCVVAFSKKKILDLKLKIEKDTNLKVAVIYGSLPPETRVQQAALFNN--GEY 451
Query: 511 DVLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPVPGSQVKQIAGRAGR------RGSI 564
D++VASDA+GMGLNL+I RVVF + KYNG++++ + SQ+KQI GRAGR G +
Sbjct: 452 DIMVASDAIGMGLNLSIDRVVFTTNMKYNGEELMEMTSSQIKQIGGRAGRFKSRSASGGV 511
Query: 565 YPDGXXXXXXXXXXXXXIECLKQPFEVVKKVGLFPFFEQVELFAGQLSNYTFCQ-LLEKF 623
P G + ++ P E +K +P E Q T LL+
Sbjct: 512 -PQGFITSFESKVLKSVRKAIEAPVEYLKTAVTWPTDEICAQLMTQFPPGTPTSVLLQTI 570
Query: 624 GENCRLDGSYFLCRHDHIK---KVANMLEKVQGLSLEDRFNFCFAPVNIRD-PKAMYHLL 679
+ D +K KV + E ++ + D+ APV +D P
Sbjct: 571 SDELEKSSDNLFTLSD-LKSKLKVIGLFEHMEDIPFFDKLKLSNAPV--KDMPMVTKAFT 627
Query: 680 RFASSYSKNAPVSI-AMGMP-----KGSAKNDAELLDL-ETKHQVLSMYLWLSHQF 728
+F + +K + + +P N++ L++ E+ + ++++Y WLS+++
Sbjct: 628 KFCETIAKRHTRGLLSYRLPFNLLDYNCIPNESYSLEVYESLYNIITLYFWLSNRY 683
>CGD|CAL0002663 [details] [associations]
symbol:SUV3 species:5476 "Candida albicans" [GO:0009060
"aerobic respiration" evidence=IMP] [GO:0001410 "chlamydospore
formation" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0045025
"mitochondrial degradosome" evidence=IEA] [GO:0000262
"mitochondrial chromosome" evidence=IEA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0071467 "cellular response to pH"
evidence=IMP] [GO:0036177 "filamentous growth of a population of
unicellular organisms in response to pH" evidence=IMP] [GO:0006264
"mitochondrial DNA replication" evidence=IEA] [GO:0000957
"mitochondrial RNA catabolic process" evidence=IEA] [GO:0000372
"Group I intron splicing" evidence=IEA] [GO:0000965 "mitochondrial
RNA 3'-end processing" evidence=IEA] [GO:0044011 "single-species
biofilm formation on inanimate substrate" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036187 "cell growth
mode switching, budding to filamentous" evidence=IMP] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0008859
"exoribonuclease II activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 CGD:CAL0002663 GO:GO:0005524 GO:GO:0071216
GO:GO:0001410 GO:GO:0036180 GO:GO:0003676 GO:GO:0035690
GO:GO:0004386 GO:GO:0009060 GO:GO:0044011 InterPro:IPR014001
SMART:SM00487 GO:GO:0071467 GO:GO:0036177 GO:GO:0036187
eggNOG:COG0513 EMBL:AACQ01000142 EMBL:AACQ01000141
RefSeq:XP_712911.1 RefSeq:XP_712944.1 ProteinModelPortal:Q59TB2
STRING:Q59TB2 GeneID:3645451 GeneID:3645490 KEGG:cal:CaO19.11994
KEGG:cal:CaO19.4519 Uniprot:Q59TB2
Length = 720
Score = 742 (266.3 bits), Expect = 3.2e-77, Sum P(2) = 3.2e-77
Identities = 175/470 (37%), Positives = 261/470 (55%)
Query: 241 LGPSDDAVKFLFPIFVEFCIEEFPDEIKRFRAMIESADLTKPHTWFPFARVMKRKIIYHC 300
L ++D + LF + ++ E F D + P WFP AR MKRKII H
Sbjct: 163 LSSNNDLIMQLFTQLLHKIFLQYRIENASFEK--PKVDFSNPAEWFPEARKMKRKIIMHV 220
Query: 301 GPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQE-----KKL 355
GPTNSGKTYN+L + ++K G Y PLRLLA E+++K N+ G+ C+L+TG+E K
Sbjct: 221 GPTNSGKTYNSLIKLSKSKTGYYAGPLRLLAREIYEKFNSQGIGCNLITGEEVVPSIDKY 280
Query: 356 VPFSNHIACTVEMVSTDEMYDVAVIDEIQMMSDACRGYAWTRALLGLMADEIHLCGDPSV 415
S + T+EM+ + D+ VIDEIQM++D RG WT A+LG++A EIHLCG+ S
Sbjct: 281 GKVSGIASGTIEMIPLHKKMDLCVIDEIQMIADPLRGSVWTNAVLGVLAHEIHLCGEESA 340
Query: 416 LDVVRKICSETGDELHEQHYERFKPLVVEAKTLLGDLRNVRSGDCVVAFSRREIFEVKMA 475
+ ++K+ TGDEL + + R L VE L+ ++ GDC+V FS+++I + K
Sbjct: 341 VPFIQKMVEITGDELEIKKFNRLGKLTVEKSNT--SLQQLKKGDCLVVFSKKKILKFKCD 398
Query: 476 IEKHTNHHCCVIYGALPPETRRQQANLFNDQDNEFDVLVASDAVGMGLNLNIRRVVFYSL 535
IE++T VIYGALPPE R Q+A+ FN+ E+DVLVASDA+GMGLNL I R+VF +
Sbjct: 399 IERNTRLKVGVIYGALPPEIRSQEASKFNN--GEYDVLVASDAIGMGLNLKINRIVFSGV 456
Query: 536 SKYNGDKIIPVPGSQVKQIAGRAGRRGSIY--PDGXXXXXXXXXXXXXIECLKQPFEVVK 593
+K+NG + + SQVKQIAGRAGR + + +G +CLK P +
Sbjct: 457 NKFNGSTVEKLSVSQVKQIAGRAGRFSAQHGSKEGFVTALHRSSLVYIDQCLKTPVSEIS 516
Query: 594 KVGLFPFFE-QVELFAGQLSNYTFCQLLEKFGENCRL--DGSYFLCRHDHIKKVANMLEK 650
K ++P + A + + E F N ++F+ D ++ N++ K
Sbjct: 517 KACIWPTSNIWRQYMANDPRKSSLSSVYENFLTNVLKFQSDNFFISELDQKVQLLNLVAK 576
Query: 651 VQGLS---LEDRFNFCFAPVNIR---DPKAMYH-LLRFASSYSKNAPVSI 693
+ LS ++D+ P+N R +PK + + +++F + K SI
Sbjct: 577 NRLLSTMIIDDQLTISETPINFRTSVNPKLLKNTVIKFYETIVKRDCKSI 626
Score = 54 (24.1 bits), Expect = 3.2e-77, Sum P(2) = 3.2e-77
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 711 LETKHQVLSMYLWLSHQFKEEVFPYAKKAEAMATDIAELLGQSLTN 756
LE H+++ ++LWLS +F E A + + + Q L N
Sbjct: 657 LEDMHRLVLLFLWLSQRFPTLFIDKDSAMEVKAL-VEKRINQELVN 701
>UNIPROTKB|Q59TB2 [details] [associations]
symbol:SUV3 "Putative uncharacterized protein SUV3"
species:237561 "Candida albicans SC5314" [GO:0001410 "chlamydospore
formation" evidence=IMP] [GO:0009060 "aerobic respiration"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036177
"filamentous growth of a population of unicellular organisms in
response to pH" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0036187 "cell growth mode switching, budding to
filamentous" evidence=IMP] [GO:0044011 "single-species biofilm
formation on inanimate substrate" evidence=IMP] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0071467 "cellular response to pH" evidence=IMP]
InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513
PROSITE:PS51194 SMART:SM00490 CGD:CAL0002663 GO:GO:0005524
GO:GO:0071216 GO:GO:0001410 GO:GO:0036180 GO:GO:0003676
GO:GO:0035690 GO:GO:0004386 GO:GO:0009060 GO:GO:0044011
InterPro:IPR014001 SMART:SM00487 GO:GO:0071467 GO:GO:0036177
GO:GO:0036187 eggNOG:COG0513 EMBL:AACQ01000142 EMBL:AACQ01000141
RefSeq:XP_712911.1 RefSeq:XP_712944.1 ProteinModelPortal:Q59TB2
STRING:Q59TB2 GeneID:3645451 GeneID:3645490 KEGG:cal:CaO19.11994
KEGG:cal:CaO19.4519 Uniprot:Q59TB2
Length = 720
Score = 742 (266.3 bits), Expect = 3.2e-77, Sum P(2) = 3.2e-77
Identities = 175/470 (37%), Positives = 261/470 (55%)
Query: 241 LGPSDDAVKFLFPIFVEFCIEEFPDEIKRFRAMIESADLTKPHTWFPFARVMKRKIIYHC 300
L ++D + LF + ++ E F D + P WFP AR MKRKII H
Sbjct: 163 LSSNNDLIMQLFTQLLHKIFLQYRIENASFEK--PKVDFSNPAEWFPEARKMKRKIIMHV 220
Query: 301 GPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQE-----KKL 355
GPTNSGKTYN+L + ++K G Y PLRLLA E+++K N+ G+ C+L+TG+E K
Sbjct: 221 GPTNSGKTYNSLIKLSKSKTGYYAGPLRLLAREIYEKFNSQGIGCNLITGEEVVPSIDKY 280
Query: 356 VPFSNHIACTVEMVSTDEMYDVAVIDEIQMMSDACRGYAWTRALLGLMADEIHLCGDPSV 415
S + T+EM+ + D+ VIDEIQM++D RG WT A+LG++A EIHLCG+ S
Sbjct: 281 GKVSGIASGTIEMIPLHKKMDLCVIDEIQMIADPLRGSVWTNAVLGVLAHEIHLCGEESA 340
Query: 416 LDVVRKICSETGDELHEQHYERFKPLVVEAKTLLGDLRNVRSGDCVVAFSRREIFEVKMA 475
+ ++K+ TGDEL + + R L VE L+ ++ GDC+V FS+++I + K
Sbjct: 341 VPFIQKMVEITGDELEIKKFNRLGKLTVEKSNT--SLQQLKKGDCLVVFSKKKILKFKCD 398
Query: 476 IEKHTNHHCCVIYGALPPETRRQQANLFNDQDNEFDVLVASDAVGMGLNLNIRRVVFYSL 535
IE++T VIYGALPPE R Q+A+ FN+ E+DVLVASDA+GMGLNL I R+VF +
Sbjct: 399 IERNTRLKVGVIYGALPPEIRSQEASKFNN--GEYDVLVASDAIGMGLNLKINRIVFSGV 456
Query: 536 SKYNGDKIIPVPGSQVKQIAGRAGRRGSIY--PDGXXXXXXXXXXXXXIECLKQPFEVVK 593
+K+NG + + SQVKQIAGRAGR + + +G +CLK P +
Sbjct: 457 NKFNGSTVEKLSVSQVKQIAGRAGRFSAQHGSKEGFVTALHRSSLVYIDQCLKTPVSEIS 516
Query: 594 KVGLFPFFE-QVELFAGQLSNYTFCQLLEKFGENCRL--DGSYFLCRHDHIKKVANMLEK 650
K ++P + A + + E F N ++F+ D ++ N++ K
Sbjct: 517 KACIWPTSNIWRQYMANDPRKSSLSSVYENFLTNVLKFQSDNFFISELDQKVQLLNLVAK 576
Query: 651 VQGLS---LEDRFNFCFAPVNIR---DPKAMYH-LLRFASSYSKNAPVSI 693
+ LS ++D+ P+N R +PK + + +++F + K SI
Sbjct: 577 NRLLSTMIIDDQLTISETPINFRTSVNPKLLKNTVIKFYETIVKRDCKSI 626
Score = 54 (24.1 bits), Expect = 3.2e-77, Sum P(2) = 3.2e-77
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 711 LETKHQVLSMYLWLSHQFKEEVFPYAKKAEAMATDIAELLGQSLTN 756
LE H+++ ++LWLS +F E A + + + Q L N
Sbjct: 657 LEDMHRLVLLFLWLSQRFPTLFIDKDSAMEVKAL-VEKRINQELVN 701
>ASPGD|ASPL0000071675 [details] [associations]
symbol:AN4723 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0045025 "mitochondrial degradosome"
evidence=IEA] [GO:0000262 "mitochondrial chromosome" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0008859 "exoribonuclease II activity" evidence=IEA] [GO:0006264
"mitochondrial DNA replication" evidence=IEA] [GO:0000957
"mitochondrial RNA catabolic process" evidence=IEA] [GO:0000372
"Group I intron splicing" evidence=IEA] [GO:0000965 "mitochondrial
RNA 3'-end processing" evidence=IEA] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
EMBL:BN001303 HOGENOM:HOG000175283 EnsemblFungi:CADANIAT00005706
OMA:CALITGE Uniprot:C8VAV2
Length = 832
Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
Identities = 169/413 (40%), Positives = 241/413 (58%)
Query: 277 ADLTKPHTWFPFARVMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFD 336
ADL P W+P AR ++R I H GPTNSGKTY+AL+R +K G Y PLRLLA EV+
Sbjct: 168 ADLRYPAEWYPQARAIQRTIHLHVGPTNSGKTYHALKRLESSKSGFYAGPLRLLAQEVYH 227
Query: 337 KVNALGVYCSLLTGQEKKLVPFSNHIAC--TVEMVSTDEMYDVAVIDEIQMMSDACRGYA 394
+ + G+ SL+TG E +L + TVEMV+ + Y+V VIDEIQM++D RG+A
Sbjct: 228 RFKSSGIPVSLVTGDEVRLSEGEKAVVVSNTVEMVNLGQTYEVGVIDEIQMIADPRRGWA 287
Query: 395 WTRALLGLMADEIHLCGDPSVLDVVRKICSETGDELHEQHYERFKPLVVEAKTLLGDLRN 454
WTRALLG A E+HLCG+ V+ ++R++ + GD+L YER PL K+L GDL +
Sbjct: 288 WTRALLGAKATELHLCGETRVVPLIRQLAALAGDKLVIHRYERLNPLKAMNKSLKGDLTS 347
Query: 455 VRSGDCVVAFSRREIFEVKMAIEKHTNHHCCVIYGALPPETRRQQANLFNDQDNEFDVLV 514
++ GDC+V+FSR I +K IE+ T +IYG LP E R QQA+LFND +N++D LV
Sbjct: 348 LQKGDCIVSFSRVGIHALKADIERKTGRRAAIIYGGLPAEIRTQQASLFNDPNNDYDFLV 407
Query: 515 ASDAVGMGLNLNIRRVVFYSLSKY--NGDKIIPVPGSQVKQIAGRAGRRGSIYPDGXXXX 572
ASDA+GMGLNL+ RR++F ++ K +G K + VP ++KQI GRAGR S G
Sbjct: 408 ASDAIGMGLNLSCRRIIFETVVKTLPSGLKRLTVP--EIKQIGGRAGRYRSAAQHGKDHQ 465
Query: 573 XXXXXXX----XXIECLKQPF--EV-------VKKVGLFPFFEQVELFAGQL-SNYTFCQ 618
+E + P+ E + G+ P E FA SN +
Sbjct: 466 QDNDNDNVGYVTSLEEVDLPYIQEALNTEPPPISAAGINPPDSVYEKFAAYFPSNASLAY 525
Query: 619 LLEKFGENCRLDGSYFLCRHDHIKKVANMLEKVQGLSLEDRFNFCFAPVNIRD 671
++++ E R++ +F+C + A +++ V GL D+ F AP+N R+
Sbjct: 526 MVKRLTEIARINNLFFMCDPSPNLENAEIIDAVPGLHFVDQLTFMAAPMNPRE 578
>GENEDB_PFALCIPARUM|PFF1140c [details] [associations]
symbol:PFF1140c "ATP-dependent DEAD box
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0016070 "RNA metabolic process" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0016070 GO:GO:0004004 EMBL:AL844505 RefSeq:XP_966219.1
ProteinModelPortal:C6KT73 PRIDE:C6KT73
EnsemblProtists:PFF1140c:mRNA GeneID:3885873 KEGG:pfa:PFF1140c
EuPathDB:PlasmoDB:PF3D7_0623700 HOGENOM:HOG000281593 Uniprot:C6KT73
Length = 1137
Score = 306 (112.8 bits), Expect = 1.6e-49, Sum P(5) = 1.6e-49
Identities = 59/153 (38%), Positives = 97/153 (63%)
Query: 361 HIACTVEMVSTDEMYDVAVIDEIQMMSDACRGYAWTRALLGLMADEIHLCGDPSVLDVVR 420
H CT+EM ++ YD A++DEIQM+++ RG+AWT L+ L + +I+LCG ++D+++
Sbjct: 411 HTVCTIEMTPLNKEYDCAIVDEIQMINNESRGHAWTNVLMNLNSKDIYLCGSEYIIDLIK 470
Query: 421 KICSETGDELHEQHYERFKPL-VVEAKTLLGDLRNVRSGDCVVAFSRREIFEVKMAIEKH 479
+ D+L + +ER L + E T L D V++GDC++ FSR I +K +EK+
Sbjct: 471 NLADILNDKLIIKKFERLGSLHLQEYNTTLED---VQTGDCIITFSRNNIMLLKRILEKY 527
Query: 480 TNHHCCVIYGALPPETRRQQANLFNDQ-DNEFD 511
N VIYG+LPP+++++Q N+FN+ N D
Sbjct: 528 -NKRVFVIYGSLPPDSKKKQINMFNEYCKNHID 559
Score = 172 (65.6 bits), Expect = 1.6e-49, Sum P(5) = 1.6e-49
Identities = 44/113 (38%), Positives = 65/113 (57%)
Query: 244 SDDAVKFLFPIFVE-FCIEE--FPDEIKRFRAMIESADLTKPHTWFPFARVMK-RKIIYH 299
SD+ + + IF++ + ++ F + IKR D T+ + + K R I +
Sbjct: 209 SDEIIVNILLIFIKKYYYKQWMFYEHIKRL------CDYTEINLYIKNNNKKKVRNIHLY 262
Query: 300 CGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQE 352
GP NSGKTY+A Q+ M +K G+YCSPLRLLA EV+ K+ + +LLTGQE
Sbjct: 263 VGPPNSGKTYHAFQKLMLSKNGLYCSPLRLLAWEVYSKLTRMNKKVNLLTGQE 315
Score = 154 (59.3 bits), Expect = 1.6e-49, Sum P(5) = 1.6e-49
Identities = 28/49 (57%), Positives = 40/49 (81%)
Query: 512 VLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPVPGSQVKQIAGRAGR 560
+L+A+D +GMGLN+NI+R++FYSL KY+GD + + S+ QIAGRAGR
Sbjct: 642 ILIATDVIGMGLNINIKRIIFYSLKKYDGDILRYLTMSEFLQIAGRAGR 690
Score = 64 (27.6 bits), Expect = 1.6e-49, Sum P(5) = 1.6e-49
Identities = 23/100 (23%), Positives = 43/100 (43%)
Query: 594 KVGLFPFFEQVELFAGQL-----SNYTFCQLLEKFGENCRLDGSYFLCRHDHIKKVANML 648
K G FP + VE L S +L+ E +L+ YF ++ + +
Sbjct: 837 KAGFFPNYHIVEELRKTLEYEYNSKIKLHDILKVLVEYVKLNDEYFFLTKNY-NNMITIT 895
Query: 649 EKVQGLSLEDR--FNFCFAPVNIRDPKAMYHLLRFASSYS 686
++++ ++LE F + P+NI + + L F S+S
Sbjct: 896 KELEHINLEQNIIFTYSLCPININNIVLLNTLKTFCMSHS 935
Score = 45 (20.9 bits), Expect = 1.6e-49, Sum P(5) = 1.6e-49
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 711 LETKHQVLSMYLWLSHQFKE 730
LE ++++ MY WL +F +
Sbjct: 1084 LEIYYEIMDMYCWLYTKFPD 1103
Score = 37 (18.1 bits), Expect = 6.2e-35, Sum P(3) = 6.2e-35
Identities = 5/22 (22%), Positives = 16/22 (72%)
Query: 786 IKSYENRKRQEKTSLTLHTEKI 807
+K Y++ ++++K ++ + T+ I
Sbjct: 628 VKKYKHHQKKKKETILIATDVI 649
>UNIPROTKB|C6KT73 [details] [associations]
symbol:PFF1140c "ATP dependent DEAD-box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR022192 Pfam:PF00271 Pfam:PF12513 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0016070
GO:GO:0004004 EMBL:AL844505 RefSeq:XP_966219.1
ProteinModelPortal:C6KT73 PRIDE:C6KT73
EnsemblProtists:PFF1140c:mRNA GeneID:3885873 KEGG:pfa:PFF1140c
EuPathDB:PlasmoDB:PF3D7_0623700 HOGENOM:HOG000281593 Uniprot:C6KT73
Length = 1137
Score = 306 (112.8 bits), Expect = 1.6e-49, Sum P(5) = 1.6e-49
Identities = 59/153 (38%), Positives = 97/153 (63%)
Query: 361 HIACTVEMVSTDEMYDVAVIDEIQMMSDACRGYAWTRALLGLMADEIHLCGDPSVLDVVR 420
H CT+EM ++ YD A++DEIQM+++ RG+AWT L+ L + +I+LCG ++D+++
Sbjct: 411 HTVCTIEMTPLNKEYDCAIVDEIQMINNESRGHAWTNVLMNLNSKDIYLCGSEYIIDLIK 470
Query: 421 KICSETGDELHEQHYERFKPL-VVEAKTLLGDLRNVRSGDCVVAFSRREIFEVKMAIEKH 479
+ D+L + +ER L + E T L D V++GDC++ FSR I +K +EK+
Sbjct: 471 NLADILNDKLIIKKFERLGSLHLQEYNTTLED---VQTGDCIITFSRNNIMLLKRILEKY 527
Query: 480 TNHHCCVIYGALPPETRRQQANLFNDQ-DNEFD 511
N VIYG+LPP+++++Q N+FN+ N D
Sbjct: 528 -NKRVFVIYGSLPPDSKKKQINMFNEYCKNHID 559
Score = 172 (65.6 bits), Expect = 1.6e-49, Sum P(5) = 1.6e-49
Identities = 44/113 (38%), Positives = 65/113 (57%)
Query: 244 SDDAVKFLFPIFVE-FCIEE--FPDEIKRFRAMIESADLTKPHTWFPFARVMK-RKIIYH 299
SD+ + + IF++ + ++ F + IKR D T+ + + K R I +
Sbjct: 209 SDEIIVNILLIFIKKYYYKQWMFYEHIKRL------CDYTEINLYIKNNNKKKVRNIHLY 262
Query: 300 CGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQE 352
GP NSGKTY+A Q+ M +K G+YCSPLRLLA EV+ K+ + +LLTGQE
Sbjct: 263 VGPPNSGKTYHAFQKLMLSKNGLYCSPLRLLAWEVYSKLTRMNKKVNLLTGQE 315
Score = 154 (59.3 bits), Expect = 1.6e-49, Sum P(5) = 1.6e-49
Identities = 28/49 (57%), Positives = 40/49 (81%)
Query: 512 VLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPVPGSQVKQIAGRAGR 560
+L+A+D +GMGLN+NI+R++FYSL KY+GD + + S+ QIAGRAGR
Sbjct: 642 ILIATDVIGMGLNINIKRIIFYSLKKYDGDILRYLTMSEFLQIAGRAGR 690
Score = 64 (27.6 bits), Expect = 1.6e-49, Sum P(5) = 1.6e-49
Identities = 23/100 (23%), Positives = 43/100 (43%)
Query: 594 KVGLFPFFEQVELFAGQL-----SNYTFCQLLEKFGENCRLDGSYFLCRHDHIKKVANML 648
K G FP + VE L S +L+ E +L+ YF ++ + +
Sbjct: 837 KAGFFPNYHIVEELRKTLEYEYNSKIKLHDILKVLVEYVKLNDEYFFLTKNY-NNMITIT 895
Query: 649 EKVQGLSLEDR--FNFCFAPVNIRDPKAMYHLLRFASSYS 686
++++ ++LE F + P+NI + + L F S+S
Sbjct: 896 KELEHINLEQNIIFTYSLCPININNIVLLNTLKTFCMSHS 935
Score = 45 (20.9 bits), Expect = 1.6e-49, Sum P(5) = 1.6e-49
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 711 LETKHQVLSMYLWLSHQFKE 730
LE ++++ MY WL +F +
Sbjct: 1084 LEIYYEIMDMYCWLYTKFPD 1103
Score = 37 (18.1 bits), Expect = 6.2e-35, Sum P(3) = 6.2e-35
Identities = 5/22 (22%), Positives = 16/22 (72%)
Query: 786 IKSYENRKRQEKTSLTLHTEKI 807
+K Y++ ++++K ++ + T+ I
Sbjct: 628 VKKYKHHQKKKKETILIATDVI 649
>UNIPROTKB|B1AR60 [details] [associations]
symbol:SUPV3L1 "ATP-dependent RNA helicase SUPV3L1,
mitochondrial" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 Pfam:PF00271 PROSITE:PS51194 GO:GO:0005524
GO:GO:0003676 GO:GO:0004386 EMBL:AL596223 UniGene:Hs.106469
HGNC:HGNC:11471 IPI:IPI00478485 SMR:B1AR60 Ensembl:ENST00000422378
Uniprot:B1AR60
Length = 263
Score = 423 (154.0 bits), Expect = 7.4e-39, P = 7.4e-39
Identities = 83/162 (51%), Positives = 114/162 (70%)
Query: 376 DVAVIDEIQMMSDACRGYAWTRALLGLMADEIHLCGDPSVLDVVRKICSETGDELHEQHY 435
+VAVIDEIQM+ D RG+AWTRALLGL A+E+HLCG+P+ +D+V ++ TG+E+ + Y
Sbjct: 92 EVAVIDEIQMIRDPARGWAWTRALLGLCAEEVHLCGEPAAIDLVMELMYTTGEEVEVRDY 151
Query: 436 ERFKPLVVEAKTLLGDLRNVRSGDCVVAFSRREIFEVKMAIEKHTNHHCCVIYGALPPET 495
+R P+ V L L N+R GDC+V FS+ +I+ V IE VIYG+LPP T
Sbjct: 152 KRLTPISV-LDHALESLDNLRPGDCIVCFSKNDIYSVSRQIEIR-GLESAVIYGSLPPGT 209
Query: 496 RRQQANLFNDQDNEFDVLVASDAVGMGLNLNIRRVVFYSLSK 537
+ QA FND ++ +LVA+DA+GMGLNL+IRR++FYSL K
Sbjct: 210 KLAQAKKFNDPNDPCKILVATDAIGMGLNLSIRRIIFYSLIK 251
>TIGR_CMR|SPO_1417 [details] [associations]
symbol:SPO_1417 "helicase, putative" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] InterPro:IPR001650 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 GO:GO:0004386
RefSeq:YP_166658.1 ProteinModelPortal:Q5LTJ7 GeneID:3192722
KEGG:sil:SPO1417 PATRIC:23376149 HOGENOM:HOG000141658 OMA:IAQIRTW
ProtClustDB:CLSK2767239 Uniprot:Q5LTJ7
Length = 959
Score = 371 (135.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 99/269 (36%), Positives = 148/269 (55%)
Query: 295 KIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAL-GV-YCSLLTGQE 352
+I+ GPTN+GKT+ A++R + + G+ PLRLLA EV+DK+ AL G +L+TG+E
Sbjct: 6 RIVAVLGPTNTGKTHYAIERMLGHRTGVIGLPLRLLAREVYDKIVALRGPSVVALVTGEE 65
Query: 353 KKLVPFSNHIACTVEMVSTDEMYDVAVIDEIQMMSDACRGYAWTRALLGLMA-DEIHLCG 411
+ + P + + CTVE + D +DEIQ+ +D RG+ +T LL E L G
Sbjct: 66 RIVPPRTQYWVCTVEAMPEGLGADCVAVDEIQLCADPERGHVFTDRLLRARGLHETLLLG 125
Query: 412 DPSVLDVVRKICSETGDELHEQHYERFKPLVVEAKTLLGDLRNVRSGDCVVAFSRREIFE 471
D +R + E ER LV + + RS +V FS ++
Sbjct: 126 S----DTMRGPIAALVPEAQFVRRERMSQLVYTGSKKITRMPP-RSA--IVGFSVENVYA 178
Query: 472 VKMAIEKHTNHHCCVIYGALPPETRRQQANLFNDQDNEFDVLVASDAVGMGLNLNIRRVV 531
+ I + V+ GAL P TR Q +L+ Q+ E D LVA+DA+GMGLNL+I V
Sbjct: 179 IAELIRRQKGG-AAVVMGALSPRTRNAQVDLY--QNGEVDYLVATDAIGMGLNLDIDHVA 235
Query: 532 FYSLSKYNGDKIIPVPGSQVKQIAGRAGR 560
F +LSK++G ++ P+ +++ QIAGRAGR
Sbjct: 236 FSALSKFDGRRMRPLAPNELAQIAGRAGR 264
>CGD|CAL0003794 [details] [associations]
symbol:orf19.1335 species:5476 "Candida albicans" [GO:0008143
"poly(A) RNA binding" evidence=IEA] [GO:0034459 "ATP-dependent
3'-5' RNA helicase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0031499 "TRAMP complex" evidence=IEA] [GO:0034476
"U5 snRNA 3'-end processing" evidence=IEA] [GO:0071049 "nuclear
retention of pre-mRNA with aberrant 3'-ends at the site of
transcription" evidence=IEA] [GO:0000467 "exonucleolytic trimming
to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic
process" evidence=IEA] [GO:0043629 "ncRNA polyadenylation"
evidence=IEA] [GO:0071051 "polyadenylation-dependent snoRNA 3'-end
processing" evidence=IEA] [GO:0071042 "nuclear
polyadenylation-dependent mRNA catabolic process" evidence=IEA]
[GO:0071038 "nuclear polyadenylation-dependent tRNA catabolic
process" evidence=IEA] [GO:0034475 "U4 snRNA 3'-end processing"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
CGD:CAL0003794 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581
EMBL:AACQ01000188 EMBL:AACQ01000187 KO:K12598 InterPro:IPR025696
Pfam:PF13234 RefSeq:XP_711657.1 RefSeq:XP_711675.1
RefSeq:XP_888948.1 STRING:Q59PN6 GeneID:3646717 GeneID:3646739
GeneID:3703907 KEGG:cal:CaO19.1335 KEGG:cal:CaO19.8915
KEGG:cal:CaO19_1335 Uniprot:Q59PN6
Length = 1106
Score = 112 (44.5 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 33/118 (27%), Positives = 61/118 (51%)
Query: 303 TNSGKT----YNALQRFMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQEKKLVPF 358
T++GKT Y Q + ++ IY SP++ L+ + F ++ A+ L+TG + + P
Sbjct: 208 TSAGKTVVAEYAIAQSLRDKQRVIYTSPIKALSNQKFRELQAIFGDVGLMTG-DVTINPD 266
Query: 359 SNHIACTVEMV------STDEMYDVA--VIDEIQMMSDACRGYAWTRALLGLMADEIH 408
+ + T E++ ++ M +VA V DE+ M D RG W ++ L+ D++H
Sbjct: 267 AGCLVMTTEILRSMLYRGSEVMREVAWVVFDEVHYMRDKSRGVVWEETII-LLPDKVH 323
Score = 102 (41.0 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 506 QDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPVPGSQVKQIAGRAGRRG 562
Q+ VL A++ +GLN+ + VVF S+ K++G V G + Q++GRAGRRG
Sbjct: 528 QEGFLKVLFATETFSIGLNMPAKTVVFTSVRKWDGVGFRWVSGGEYIQMSGRAGRRG 584
Score = 38 (18.4 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 13/62 (20%), Positives = 28/62 (45%)
Query: 85 FCSSVGNEGLVNNGTATKPKVEDVEQESGVNFVQGGEEDKVEVLDDYFDGSVISDSTMVE 144
F SS+ ++N TK K + + + + + + K++ L D FD + + +E
Sbjct: 5 FSSSLVMRCMLNRTRTTKRKKKFIVKFNPLTIKHYNQLQKMDDLFDVFDEAPQAAPPKIE 64
Query: 145 SV 146
+
Sbjct: 65 EI 66
>POMBASE|SPAC6F12.16c [details] [associations]
symbol:mtr4 "ATP-dependent RNA helicase, TRAMP complex
subunit Mtr4" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0016078 "tRNA catabolic process" evidence=ISO]
[GO:0031499 "TRAMP complex" evidence=IDA] [GO:0043630 "ncRNA
polyadenylation involved in polyadenylation-dependent ncRNA
catabolic process" evidence=ISO] [GO:0071049 "nuclear retention of
pre-mRNA with aberrant 3'-ends at the site of transcription"
evidence=ISO] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
PomBase:SPAC6F12.16c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GO:GO:0003676 GO:GO:0031499 GO:GO:0043630 GO:GO:0016078
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 HOGENOM:HOG000163047 KO:K12598 InterPro:IPR025696
Pfam:PF13234 EMBL:AB027847 PIR:T11667 RefSeq:NP_593302.1
ProteinModelPortal:O14232 STRING:O14232 EnsemblFungi:SPAC6F12.16c.1
GeneID:2541639 KEGG:spo:SPAC6F12.16c OMA:DDRISAD OrthoDB:EOG4S1XG7
NextBio:20802732 GO:GO:0071049 Uniprot:O14232
Length = 1117
Score = 102 (41.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 21/57 (36%), Positives = 35/57 (61%)
Query: 506 QDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPVPGSQVKQIAGRAGRRG 562
Q+ VL A++ +GLN+ + VVF ++ K++G + G + Q++GRAGRRG
Sbjct: 540 QEGLLKVLFATETFSIGLNMPAKTVVFTNVRKFDGKTFRWISGGEYIQMSGRAGRRG 596
Score = 101 (40.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 48/195 (24%), Positives = 90/195 (46%)
Query: 267 IKRFRAMIESADLTKPHTWFPF-----ARVMKRKIIYHCGPTNSGKT----YNALQRFME 317
I + ++ I A T P T PF A + +++ + T++GKT Y Q +
Sbjct: 182 ISKHKSPIPPAR-TYPFTLDPFQAVSIACIERQESVLVSAHTSAGKTVVAEYAVAQSLRD 240
Query: 318 AKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQEKKLVPFSNHIACTVEMV------ST 371
++ IY SP++ L+ + + ++ A L+TG + + P + + T E++ +
Sbjct: 241 KQRVIYTSPIKALSNQKYRELLAEFGDVGLMTG-DVTINPDATCLVMTTEILRSMLYRGS 299
Query: 372 DEMYDVA--VIDEIQMMSDACRGYAWTRALLGLMADEIHLCGDPSVLDVVRKICSETGDE 429
+ M +VA + DEI M D RG W ++ L+ D+ H + + + +E +
Sbjct: 300 EVMREVAWVIFDEIHYMRDKERGVVWEETII-LLPDKSHFVFLSATIPNAMQF-AEWITK 357
Query: 430 LHEQ--H--YERFKP 440
+H Q H Y F+P
Sbjct: 358 IHRQPCHVVYTDFRP 372
>UNIPROTKB|E1BMS0 [details] [associations]
symbol:LOC100139548 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0055087 "Ski complex" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 OMA:TRLDETC GeneTree:ENSGT00690000102154
EMBL:DAAA02055371 IPI:IPI00690289 RefSeq:XP_003583920.1
RefSeq:XP_003587743.1 Ensembl:ENSBTAT00000007339 GeneID:100139548
KEGG:bta:100139548 Uniprot:E1BMS0
Length = 1246
Score = 107 (42.7 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 27/58 (46%), Positives = 37/58 (63%)
Query: 512 VLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPV-PGSQVKQIAGRAGRRGSIYPDG 568
VL A++ MG+N+ R VVF S+ K++G + PG V Q+AGRAGRRG + P G
Sbjct: 658 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYV-QMAGRAGRRG-LDPTG 713
Score = 93 (37.8 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 35/126 (27%), Positives = 63/126 (50%)
Query: 297 IYHCGPTNSGKTYNALQRFMEAKKG----IYCSPLRLLAMEVF-DKVNALGVYCSLLTGQ 351
++ T++GKT A A+K IY SP++ L+ + F D N G LLTG
Sbjct: 328 VFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDV-GLLTG- 385
Query: 352 EKKLVPFSNHIACTVEMV------STDEMYDV--AVIDEIQMMSDACRGYAWTRALLGLM 403
+ +L P ++ + T E++ +D + D+ + DE+ ++DA RG W L+ ++
Sbjct: 386 DVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDAERGVVWEEVLI-ML 444
Query: 404 ADEIHL 409
D + +
Sbjct: 445 PDHVSI 450
>UNIPROTKB|E2RSD6 [details] [associations]
symbol:SKIV2L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0055087 "Ski complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 KO:K12599 OMA:TRLDETC GeneTree:ENSGT00690000102154
CTD:6499 EMBL:AAEX03008222 RefSeq:XP_538841.2
ProteinModelPortal:E2RSD6 Ensembl:ENSCAFT00000001053 GeneID:481720
KEGG:cfa:481720 NextBio:20856463 Uniprot:E2RSD6
Length = 1246
Score = 107 (42.7 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 27/58 (46%), Positives = 37/58 (63%)
Query: 512 VLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPV-PGSQVKQIAGRAGRRGSIYPDG 568
VL A++ MG+N+ R VVF S+ K++G + PG V Q+AGRAGRRG + P G
Sbjct: 658 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYV-QMAGRAGRRG-LDPTG 713
Score = 93 (37.8 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 35/126 (27%), Positives = 63/126 (50%)
Query: 297 IYHCGPTNSGKTYNALQRFMEAKKG----IYCSPLRLLAMEVF-DKVNALGVYCSLLTGQ 351
++ T++GKT A A+K IY SP++ L+ + F D N G LLTG
Sbjct: 328 VFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDV-GLLTG- 385
Query: 352 EKKLVPFSNHIACTVEMV------STDEMYDV--AVIDEIQMMSDACRGYAWTRALLGLM 403
+ +L P ++ + T E++ +D + D+ + DE+ ++DA RG W L+ ++
Sbjct: 386 DVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDAERGVVWEEVLI-ML 444
Query: 404 ADEIHL 409
D + +
Sbjct: 445 PDHVSI 450
>UNIPROTKB|F1RQW4 [details] [associations]
symbol:SKIV2L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055087 "Ski complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GO:GO:0055087 OMA:TRLDETC GeneTree:ENSGT00690000102154
EMBL:CT956038 Ensembl:ENSSSCT00000001566 ArrayExpress:F1RQW4
Uniprot:F1RQW4
Length = 1246
Score = 107 (42.7 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 27/58 (46%), Positives = 37/58 (63%)
Query: 512 VLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPV-PGSQVKQIAGRAGRRGSIYPDG 568
VL A++ MG+N+ R VVF S+ K++G + PG V Q+AGRAGRRG + P G
Sbjct: 658 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYV-QMAGRAGRRG-LDPTG 713
Score = 93 (37.8 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 35/126 (27%), Positives = 63/126 (50%)
Query: 297 IYHCGPTNSGKTYNALQRFMEAKKG----IYCSPLRLLAMEVF-DKVNALGVYCSLLTGQ 351
++ T++GKT A A+K IY SP++ L+ + F D N G LLTG
Sbjct: 328 VFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDV-GLLTG- 385
Query: 352 EKKLVPFSNHIACTVEMV------STDEMYDV--AVIDEIQMMSDACRGYAWTRALLGLM 403
+ +L P ++ + T E++ +D + D+ + DE+ ++DA RG W L+ ++
Sbjct: 386 DVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDAERGVVWEEVLI-ML 444
Query: 404 ADEIHL 409
D + +
Sbjct: 445 PDHVSI 450
>UNIPROTKB|F5H7B0 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL662849 EMBL:AL645922
InterPro:IPR025696 Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L
IPI:IPI01021910 SMR:F5H7B0 Ensembl:ENST00000544581
Ensembl:ENST00000546549 Uniprot:F5H7B0
Length = 1053
Score = 107 (42.7 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 27/58 (46%), Positives = 37/58 (63%)
Query: 512 VLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPV-PGSQVKQIAGRAGRRGSIYPDG 568
VL A++ MG+N+ R VVF S+ K++G + PG V Q+AGRAGRRG + P G
Sbjct: 465 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYV-QMAGRAGRRG-LDPTG 520
Score = 89 (36.4 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 34/126 (26%), Positives = 62/126 (49%)
Query: 297 IYHCGPTNSGKTYNALQRFMEAKKG----IYCSPLRLLAMEVF-DKVNALGVYCSLLTGQ 351
++ T++GKT A A+K IY SP++ L+ + F D N G LLTG
Sbjct: 135 VFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDV-GLLTG- 192
Query: 352 EKKLVPFSNHIACTVEMV------STDEMYDV--AVIDEIQMMSDACRGYAWTRALLGLM 403
+ +L P ++ + T E++ +D + D+ + DE+ ++D RG W L+ ++
Sbjct: 193 DVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDVERGVVWEEVLI-ML 251
Query: 404 ADEIHL 409
D + +
Sbjct: 252 PDHVSI 257
>UNIPROTKB|F8VS23 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL844853 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI00945125
SMR:F8VS23 Ensembl:ENST00000546908 Ensembl:ENST00000552714
Ensembl:ENST00000552746 Ensembl:ENST00000553255 UCSC:uc011ghl.1
Uniprot:F8VS23
Length = 1053
Score = 107 (42.7 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 27/58 (46%), Positives = 37/58 (63%)
Query: 512 VLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPV-PGSQVKQIAGRAGRRGSIYPDG 568
VL A++ MG+N+ R VVF S+ K++G + PG V Q+AGRAGRRG + P G
Sbjct: 465 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYV-QMAGRAGRRG-LDPTG 520
Score = 89 (36.4 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 34/126 (26%), Positives = 62/126 (49%)
Query: 297 IYHCGPTNSGKTYNALQRFMEAKKG----IYCSPLRLLAMEVF-DKVNALGVYCSLLTGQ 351
++ T++GKT A A+K IY SP++ L+ + F D N G LLTG
Sbjct: 135 VFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDV-GLLTG- 192
Query: 352 EKKLVPFSNHIACTVEMV------STDEMYDV--AVIDEIQMMSDACRGYAWTRALLGLM 403
+ +L P ++ + T E++ +D + D+ + DE+ ++D RG W L+ ++
Sbjct: 193 DVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDVERGVVWEEVLI-ML 251
Query: 404 ADEIHL 409
D + +
Sbjct: 252 PDHVSI 257
>UNIPROTKB|F1LP39 [details] [associations]
symbol:Skiv2l "Protein Skiv2l" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 RGD:1303059 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087
OMA:TRLDETC GeneTree:ENSGT00690000102154 IPI:IPI00417365
Ensembl:ENSRNOT00000000481 Uniprot:F1LP39
Length = 1206
Score = 107 (42.7 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 27/58 (46%), Positives = 37/58 (63%)
Query: 512 VLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPV-PGSQVKQIAGRAGRRGSIYPDG 568
VL A++ MG+N+ R VVF S+ K++G + PG V Q+AGRAGRRG + P G
Sbjct: 617 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYV-QMAGRAGRRG-LDPTG 672
Score = 90 (36.7 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 35/119 (29%), Positives = 59/119 (49%)
Query: 297 IYHCGPTNSGKTYNALQRFMEAKKG----IYCSPLRLLAMEVF-DKVNALGVYCSLLTGQ 351
++ T++GKT A A+K IY SP++ L+ + F D N G LLTG
Sbjct: 287 VFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDV-GLLTG- 344
Query: 352 EKKLVPFSNHIACTVEMV------STDEMYDV--AVIDEIQMMSDACRGYAWTRALLGL 402
+ +L P ++ + T E++ +D + D+ + DE+ ++DA RG W L+ L
Sbjct: 345 DVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDAERGVVWEEVLIML 403
>UNIPROTKB|B4DM01 [details] [associations]
symbol:SKIV2L "cDNA FLJ57529, highly similar to Helicase
SKI2W (EC 3.6.1.-)" species:9606 "Homo sapiens" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL662849 eggNOG:COG4581
InterPro:IPR025696 Pfam:PF13234 UniGene:Hs.89864 HGNC:HGNC:10898
HOVERGEN:HBG060025 OrthoDB:EOG47H5P5 ChiTaRS:SKIV2L EMBL:AK297230
IPI:IPI01014021 SMR:B4DM01 STRING:B4DM01 Ensembl:ENST00000551164
Uniprot:B4DM01
Length = 1088
Score = 107 (42.7 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 27/58 (46%), Positives = 37/58 (63%)
Query: 512 VLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPV-PGSQVKQIAGRAGRRGSIYPDG 568
VL A++ MG+N+ R VVF S+ K++G + PG V Q+AGRAGRRG + P G
Sbjct: 500 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYV-QMAGRAGRRG-LDPTG 555
Score = 89 (36.4 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 34/126 (26%), Positives = 62/126 (49%)
Query: 297 IYHCGPTNSGKTYNALQRFMEAKKG----IYCSPLRLLAMEVF-DKVNALGVYCSLLTGQ 351
++ T++GKT A A+K IY SP++ L+ + F D N G LLTG
Sbjct: 170 VFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDV-GLLTG- 227
Query: 352 EKKLVPFSNHIACTVEMV------STDEMYDV--AVIDEIQMMSDACRGYAWTRALLGLM 403
+ +L P ++ + T E++ +D + D+ + DE+ ++D RG W L+ ++
Sbjct: 228 DVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDVERGVVWEEVLI-ML 286
Query: 404 ADEIHL 409
D + +
Sbjct: 287 PDHVSI 292
>UNIPROTKB|F8VNU1 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL844853 EMBL:BX005143
EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI01022196
SMR:F8VNU1 Ensembl:ENST00000546742 Ensembl:ENST00000547054
Ensembl:ENST00000550012 Ensembl:ENST00000550640 UCSC:uc011ghk.1
Uniprot:F8VNU1
Length = 1088
Score = 107 (42.7 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 27/58 (46%), Positives = 37/58 (63%)
Query: 512 VLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPV-PGSQVKQIAGRAGRRGSIYPDG 568
VL A++ MG+N+ R VVF S+ K++G + PG V Q+AGRAGRRG + P G
Sbjct: 500 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYV-QMAGRAGRRG-LDPTG 555
Score = 89 (36.4 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 34/126 (26%), Positives = 62/126 (49%)
Query: 297 IYHCGPTNSGKTYNALQRFMEAKKG----IYCSPLRLLAMEVF-DKVNALGVYCSLLTGQ 351
++ T++GKT A A+K IY SP++ L+ + F D N G LLTG
Sbjct: 170 VFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDV-GLLTG- 227
Query: 352 EKKLVPFSNHIACTVEMV------STDEMYDV--AVIDEIQMMSDACRGYAWTRALLGLM 403
+ +L P ++ + T E++ +D + D+ + DE+ ++D RG W L+ ++
Sbjct: 228 DVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDVERGVVWEEVLI-ML 286
Query: 404 ADEIHL 409
D + +
Sbjct: 287 PDHVSI 292
>ASPGD|ASPL0000070749 [details] [associations]
symbol:mtr4 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0031499 "TRAMP
complex" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:BN001303
GO:GO:0031499 GO:GO:0043629 GO:GO:0071035 GO:GO:0071038
EMBL:AACD01000076 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000467 GO:GO:0071042 GO:GO:0071051 GO:GO:0008143
GO:GO:0034459 eggNOG:COG4581 GO:GO:0034475 GO:GO:0034476
HOGENOM:HOG000163047 KO:K12598 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 OrthoDB:EOG4S1XG7 GO:GO:0071049 RefSeq:XP_662016.1
ProteinModelPortal:Q5B4W8 STRING:Q5B4W8
EnsemblFungi:CADANIAT00006045 GeneID:2872204 KEGG:ani:AN4412.2
Uniprot:Q5B4W8
Length = 1073
Score = 99 (39.9 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 506 QDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPVPGSQVKQIAGRAGRRG 562
Q+ VL A++ +GLN+ + VVF S+ K++G V S+ Q++GRAGRRG
Sbjct: 496 QEGLIKVLFATETFSIGLNMPAKTVVFTSVRKFDGFSQRWVTPSEFVQMSGRAGRRG 552
Score = 97 (39.2 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 39/143 (27%), Positives = 66/143 (46%)
Query: 282 PHTWFPFARVMKRKI-----IYHCGPTNSGKT----YNALQRFMEAKKGIYCSPLRLLAM 332
P T PF +V I + T++GKT Y Q ++ IY SP++ L+
Sbjct: 150 PFTLDPFQQVAVSSIQRGESVLVSAHTSAGKTVVAEYAIAQSLKNNQRVIYTSPIKALSN 209
Query: 333 EVFDKVNALGVYCSLLTGQEKKLVPFSNHIACTVEMV------STDEMYDVA--VIDEIQ 384
+ + + A L+TG + + P + + T E++ ++ M +VA V DEI
Sbjct: 210 QKYREFAAEFGDVGLMTG-DVTINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEIH 268
Query: 385 MMSDACRGYAWTRALLGLMADEI 407
M DA RG W ++ L+ D++
Sbjct: 269 YMRDATRGVVWEETII-LLPDKV 290
>RGD|1303059 [details] [associations]
symbol:Skiv2l "superkiller viralicidic activity 2-like (S.
cerevisiae )" species:10116 "Rattus norvegicus" [GO:0055087 "Ski
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
RGD:1303059 GO:GO:0005524 GO:GO:0003676 EMBL:BX883045
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 HOGENOM:HOG000163048
KO:K12599 CTD:6499 HOVERGEN:HBG060025 OrthoDB:EOG47H5P5
IPI:IPI00417365 RefSeq:NP_998724.1 UniGene:Rn.138027
ProteinModelPortal:Q6MG76 IntAct:Q6MG76 PhosphoSite:Q6MG76
PRIDE:Q6MG76 GeneID:294260 KEGG:rno:294260 UCSC:RGD:1303059
InParanoid:Q6MG76 NextBio:637849 ArrayExpress:Q6MG76
Genevestigator:Q6MG76 Uniprot:Q6MG76
Length = 1241
Score = 107 (42.7 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 27/58 (46%), Positives = 37/58 (63%)
Query: 512 VLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPV-PGSQVKQIAGRAGRRGSIYPDG 568
VL A++ MG+N+ R VVF S+ K++G + PG V Q+AGRAGRRG + P G
Sbjct: 652 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYV-QMAGRAGRRG-LDPTG 707
Score = 90 (36.7 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 35/119 (29%), Positives = 59/119 (49%)
Query: 297 IYHCGPTNSGKTYNALQRFMEAKKG----IYCSPLRLLAMEVF-DKVNALGVYCSLLTGQ 351
++ T++GKT A A+K IY SP++ L+ + F D N G LLTG
Sbjct: 322 VFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDV-GLLTG- 379
Query: 352 EKKLVPFSNHIACTVEMV------STDEMYDV--AVIDEIQMMSDACRGYAWTRALLGL 402
+ +L P ++ + T E++ +D + D+ + DE+ ++DA RG W L+ L
Sbjct: 380 DVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDAERGVVWEEVLIML 438
>UNIPROTKB|Q15477 [details] [associations]
symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0055087 "Ski
complex" evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=TAS] Reactome:REACT_17015 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 EMBL:AF019413 EMBL:AL662849 EMBL:AL645922
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC EMBL:U09877 EMBL:X98378
EMBL:Z48796 IPI:IPI00414819 PIR:S56752 RefSeq:NP_008860.4
UniGene:Hs.89864 ProteinModelPortal:Q15477 SMR:Q15477 IntAct:Q15477
STRING:Q15477 PhosphoSite:Q15477 DMDM:3123284 PaxDb:Q15477
PRIDE:Q15477 DNASU:6499 Ensembl:ENST00000375394
Ensembl:ENST00000383336 Ensembl:ENST00000412823
Ensembl:ENST00000421789 Ensembl:ENST00000429465
Ensembl:ENST00000448219 GeneID:6499 KEGG:hsa:6499 UCSC:uc003nyn.1
CTD:6499 GeneCards:GC06P031926 H-InvDB:HIX0005742
H-InvDB:HIX0166115 H-InvDB:HIX0166390 H-InvDB:HIX0166908
H-InvDB:HIX0167165 H-InvDB:HIX0167404 HGNC:HGNC:10898 MIM:600478
MIM:614602 neXtProt:NX_Q15477 Orphanet:84064 PharmGKB:PA35798
HOVERGEN:HBG060025 InParanoid:Q15477 OrthoDB:EOG47H5P5
PhylomeDB:Q15477 ChiTaRS:SKIV2L GenomeRNAi:6499 NextBio:25263
ArrayExpress:Q15477 Bgee:Q15477 CleanEx:HS_SKIV2L
Genevestigator:Q15477 Uniprot:Q15477
Length = 1246
Score = 107 (42.7 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 27/58 (46%), Positives = 37/58 (63%)
Query: 512 VLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPV-PGSQVKQIAGRAGRRGSIYPDG 568
VL A++ MG+N+ R VVF S+ K++G + PG V Q+AGRAGRRG + P G
Sbjct: 658 VLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYV-QMAGRAGRRG-LDPTG 713
Score = 89 (36.4 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 34/126 (26%), Positives = 62/126 (49%)
Query: 297 IYHCGPTNSGKTYNALQRFMEAKKG----IYCSPLRLLAMEVF-DKVNALGVYCSLLTGQ 351
++ T++GKT A A+K IY SP++ L+ + F D N G LLTG
Sbjct: 328 VFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDV-GLLTG- 385
Query: 352 EKKLVPFSNHIACTVEMV------STDEMYDV--AVIDEIQMMSDACRGYAWTRALLGLM 403
+ +L P ++ + T E++ +D + D+ + DE+ ++D RG W L+ ++
Sbjct: 386 DVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDVERGVVWEEVLI-ML 444
Query: 404 ADEIHL 409
D + +
Sbjct: 445 PDHVSI 450
>SGD|S000003586 [details] [associations]
symbol:MTR4 "ATP-dependent 3'-5' RNA helicase of the DExD/H
family" species:4932 "Saccharomyces cerevisiae" [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0034475 "U4 snRNA 3'-end processing"
evidence=IMP] [GO:0000467 "exonucleolytic trimming to generate
mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016075 "rRNA catabolic process" evidence=IMP] [GO:0043629
"ncRNA polyadenylation" evidence=IDA] [GO:0071038 "nuclear
polyadenylation-dependent tRNA catabolic process" evidence=IGI;IDA]
[GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic
process" evidence=IMP] [GO:0071031 "nuclear mRNA surveillance of
mRNA 3'-end processing" evidence=IGI;IMP] [GO:0071042 "nuclear
polyadenylation-dependent mRNA catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0031499 "TRAMP complex" evidence=IDA;IPI] [GO:0008143 "poly(A)
RNA binding" evidence=IDA] [GO:0034459 "ATP-dependent 3'-5' RNA
helicase activity" evidence=IMP;IDA] [GO:0034476 "U5 snRNA 3'-end
processing" evidence=IMP] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0071049
"nuclear retention of pre-mRNA with aberrant 3'-ends at the site of
transcription" evidence=IGI] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0071051
"polyadenylation-dependent snoRNA 3'-end processing" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011254 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
SGD:S000003586 GO:GO:0005524 GO:GO:0005730 EMBL:BK006943
GO:GO:0016491 GO:GO:0031499 GO:GO:0043629 GO:GO:0071035
GO:GO:0071038 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF56821 GO:GO:0000467 GO:GO:0071042 GO:GO:0071051
GO:GO:0008143 GO:GO:0034459 eggNOG:COG4581 GO:GO:0034475
GO:GO:0034476 GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047
KO:K12598 OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234
OrthoDB:EOG4S1XG7 GO:GO:0071049 EMBL:Z49325 PIR:S56822
RefSeq:NP_012485.1 PDB:2XGJ PDB:3L9O PDBsum:2XGJ PDBsum:3L9O
ProteinModelPortal:P47047 SMR:P47047 DIP:DIP-6394N IntAct:P47047
MINT:MINT-620894 STRING:P47047 PaxDb:P47047 PeptideAtlas:P47047
EnsemblFungi:YJL050W GeneID:853397 KEGG:sce:YJL050W CYGD:YJL050w
EvolutionaryTrace:P47047 NextBio:973882 Genevestigator:P47047
GermOnline:YJL050W Uniprot:P47047
Length = 1073
Score = 108 (43.1 bits), Expect = 8.5e-06, Sum P(3) = 8.5e-06
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 506 QDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPVPGSQVKQIAGRAGRRG 562
Q+ VL A++ +GLN+ + VVF S+ K++G + V G + Q++GRAGRRG
Sbjct: 492 QEGFLKVLFATETFSIGLNMPAKTVVFTSVRKWDGQQFRWVSGGEYIQMSGRAGRRG 548
Score = 95 (38.5 bits), Expect = 8.5e-06, Sum P(3) = 8.5e-06
Identities = 38/154 (24%), Positives = 70/154 (45%)
Query: 303 TNSGKT----YNALQRFMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQEKKLVPF 358
T++GKT Y Q ++ IY SP++ L+ + + ++ A L+TG + + P
Sbjct: 173 TSAGKTVVAEYAIAQSLKNKQRVIYTSPIKALSNQKYRELLAEFGDVGLMTG-DITINPD 231
Query: 359 SNHIACTVEMV------STDEMYDVA--VIDEIQMMSDACRGYAWTRALLGLMADEIH-- 408
+ + T E++ ++ M +VA + DE+ M D RG W ++ L+ D++
Sbjct: 232 AGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRDKERGVVWEETII-LLPDKVRYV 290
Query: 409 -LCGD-PSVLDVVRKICSETGDELHEQHYERFKP 440
L P+ ++ IC H Y F+P
Sbjct: 291 FLSATIPNAMEFAEWICKIHSQPCHIV-YTNFRP 323
Score = 37 (18.1 bits), Expect = 8.5e-06, Sum P(3) = 8.5e-06
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 642 KKVANMLEKVQGLSLEDRFN 661
KK+A + + G+ +ED N
Sbjct: 623 KKLAELKKDFDGIEVEDEEN 642
>UNIPROTKB|G4NH56 [details] [associations]
symbol:MGG_03931 "FRQ-interacting RNA helicase"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0031499 GO:GO:0043629
GO:GO:0071035 GO:GO:0071038 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000467 GO:GO:0071042
GO:GO:0071051 GO:GO:0008143 GO:GO:0034459 GO:GO:0034475
GO:GO:0034476 KO:K12598 InterPro:IPR025696 Pfam:PF13234
GO:GO:0071049 RefSeq:XP_003719933.1 EnsemblFungi:MGG_03931T0
GeneID:2677161 KEGG:mgr:MGG_03931 Uniprot:G4NH56
Length = 1102
Score = 114 (45.2 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 506 QDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPVPGSQVKQIAGRAGRRG 562
Q+N VL A++ +GLN+ + VVF + K++G K P+ S+ Q++GRAGRRG
Sbjct: 519 QENLIKVLFATETFSIGLNMPAKTVVFSQVKKFDGVKERPLTPSEYIQMSGRAGRRG 575
Score = 80 (33.2 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 31/117 (26%), Positives = 56/117 (47%)
Query: 303 TNSGKT----YNALQRFMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQEKKLVPF 358
T++GKT Y ++ IY SP++ L+ + F A L+TG + + P
Sbjct: 200 TSAGKTVVAEYAIAHCLKRNQRVIYTSPIKALSNQKFRDFQAEFGDVGLMTG-DVTINPT 258
Query: 359 SNHIACTVEMVST-----DEMY-DVA--VIDEIQMMSDACRGYAWTRALLGLMADEI 407
++ + T E++ + E+ +V V DEI M DA RG W ++ ++ D++
Sbjct: 259 ASCLVMTTEILRSMLYRGSEITREVGWVVFDEIHYMRDATRGVVWEETII-MLPDKV 314
>TAIR|locus:2063648 [details] [associations]
symbol:HEN2 "hua enhancer 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0010093
"specification of floral organ identity" evidence=IMP] [GO:0016070
"RNA metabolic process" evidence=TAS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=RCA]
[GO:0003002 "regionalization" evidence=RCA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=RCA] [GO:0006396 "RNA
processing" evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0030422 "production of siRNA involved in
RNA interference" evidence=RCA] [GO:0033043 "regulation of
organelle organization" evidence=RCA] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0043687 "post-translational protein modification" evidence=RCA]
[GO:0045010 "actin nucleation" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GO:GO:0003676 GO:GO:0010093
GO:GO:0016070 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AC005171 GO:GO:0003724 HOGENOM:HOG000163047
KO:K12598 InterPro:IPR025696 Pfam:PF13234 EMBL:BT005794
IPI:IPI00539432 PIR:B84481 RefSeq:NP_565338.1 UniGene:At.20667
ProteinModelPortal:Q9ZVW2 SMR:Q9ZVW2 IntAct:Q9ZVW2 PRIDE:Q9ZVW2
EnsemblPlants:AT2G06990.1 GeneID:815269 KEGG:ath:AT2G06990
TAIR:At2g06990 InParanoid:Q9ZVW2 OMA:TFDRVCD PhylomeDB:Q9ZVW2
ProtClustDB:CLSN2688028 ArrayExpress:Q9ZVW2 Genevestigator:Q9ZVW2
Uniprot:Q9ZVW2
Length = 995
Score = 101 (40.6 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 486 VIYGALPPETRRQQANLFNDQDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIP 545
V + L P + LF Q+ L A++ MGLN+ + VVF ++ K++GD
Sbjct: 404 VHHSGLLPVIKELVELLF--QEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRY 461
Query: 546 VPGSQVKQIAGRAGRRG 562
+ + Q++GRAGRRG
Sbjct: 462 IGSGEYIQMSGRAGRRG 478
Score = 91 (37.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 38/140 (27%), Positives = 66/140 (47%)
Query: 280 TKPHTWFPFARV----MKRK-IIYHCGPTNSGKT----YNALQRFMEAKKGIYCSPLRLL 330
T P PF V ++RK I T++GKT Y F + ++ IY SPL+ L
Sbjct: 77 TYPFKLDPFQSVSVACLERKESILVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKAL 136
Query: 331 AMEVFDKVNALGVYCSLLTGQEKKLVPFSNHIACTVEMV------STDEMYDVA--VIDE 382
+ + + ++ L+TG + L P ++ + T E++ ++ + +VA + DE
Sbjct: 137 SNQKYRELQHEFKDVGLMTG-DVTLSPNASCLVMTTEILRAMLYRGSEVLKEVAWVIFDE 195
Query: 383 IQMMSDACRGYAWTRALLGL 402
I M D RG W +++ L
Sbjct: 196 IHYMKDRERGVVWEESIIFL 215
>UNIPROTKB|G3MYJ7 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00690000102230 EMBL:DAAA02050346 EMBL:DAAA02050343
EMBL:DAAA02050344 EMBL:DAAA02050345 Ensembl:ENSBTAT00000064767
Uniprot:G3MYJ7
Length = 605
Score = 93 (37.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 488 YGALPPETRRQQANLFNDQDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPVP 547
+G L P + LF++ L A++ MG+N+ R V+F + K++G +
Sbjct: 454 HGGLLPILKETIEILFSE--GLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWIS 511
Query: 548 GSQVKQIAGRAGRRG 562
+ Q++GRAGRRG
Sbjct: 512 SGEYIQMSGRAGRRG 526
Score = 93 (37.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 38/154 (24%), Positives = 74/154 (48%)
Query: 303 TNSGKT----YNALQRFMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQEKKLVPF 358
T++GKT Y E ++ I+ SP++ L+ + + ++ L+TG + + P
Sbjct: 161 TSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTG-DVTINPT 219
Query: 359 SNHIACTVEMV------STDEMYDVA--VIDEIQMMSDACRGYAWTRALLGLMADEIHLC 410
++ + T E++ ++ M +VA + DEI M D+ RG W ++ L+ D +H
Sbjct: 220 ASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETII-LLPDNVHYV 278
Query: 411 GDPSVLDVVRKICSETGDELHEQ--H--YERFKP 440
+ + R+ +E LH+Q H Y ++P
Sbjct: 279 FLSATIPNARQF-AEWICHLHKQPCHVIYTDYRP 311
>MGI|MGI:1919448 [details] [associations]
symbol:Skiv2l2 "superkiller viralicidic activity 2-like 2
(S. cerevisiae)" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000460 "maturation of 5.8S
rRNA" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919448 GO:GO:0005524
GO:GO:0005730 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026 eggNOG:COG4581
GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047 KO:K12598
OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 CTD:23517
HOVERGEN:HBG104255 OrthoDB:EOG4D52WW ChiTaRS:SKIV2L2 EMBL:AK012158
EMBL:BC029230 IPI:IPI00113134 RefSeq:NP_082427.1 UniGene:Mm.291029
ProteinModelPortal:Q9CZU3 SMR:Q9CZU3 IntAct:Q9CZU3 STRING:Q9CZU3
PhosphoSite:Q9CZU3 PaxDb:Q9CZU3 PRIDE:Q9CZU3
Ensembl:ENSMUST00000022281 GeneID:72198 KEGG:mmu:72198
UCSC:uc007rws.1 InParanoid:Q9CZU3 NextBio:335677 Bgee:Q9CZU3
Genevestigator:Q9CZU3 GermOnline:ENSMUSG00000016018 Uniprot:Q9CZU3
Length = 1040
Score = 97 (39.2 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 488 YGALPPETRRQQANLFNDQDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPVP 547
+G L P + LF++ L A++ MG+N+ R V+F + KY+G +
Sbjct: 454 HGGLLPILKETIEILFSE--GLIKALFATETFAMGINMPARTVLFTNARKYDGKDFRWIS 511
Query: 548 GSQVKQIAGRAGRRG 562
+ Q++GRAGRRG
Sbjct: 512 SGEYIQMSGRAGRRG 526
Score = 93 (37.8 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 38/154 (24%), Positives = 74/154 (48%)
Query: 303 TNSGKT----YNALQRFMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQEKKLVPF 358
T++GKT Y E ++ I+ SP++ L+ + + ++ L+TG + + P
Sbjct: 161 TSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTG-DVTINPT 219
Query: 359 SNHIACTVEMV------STDEMYDVA--VIDEIQMMSDACRGYAWTRALLGLMADEIHLC 410
++ + T E++ ++ M +VA + DEI M D+ RG W ++ L+ D +H
Sbjct: 220 ASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETII-LLPDNVHYV 278
Query: 411 GDPSVLDVVRKICSETGDELHEQ--H--YERFKP 440
+ + R+ +E LH+Q H Y ++P
Sbjct: 279 FLSATIPNARQF-AEWICHLHKQPCHVIYTDYRP 311
>UNIPROTKB|F1MAH7 [details] [associations]
symbol:F1MAH7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026 InterPro:IPR025696
Pfam:PF13234 IPI:IPI00372914 PRIDE:F1MAH7
Ensembl:ENSRNOT00000013683 ArrayExpress:F1MAH7 Uniprot:F1MAH7
Length = 1046
Score = 97 (39.2 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 488 YGALPPETRRQQANLFNDQDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPVP 547
+G L P + LF++ L A++ MG+N+ R V+F + KY+G +
Sbjct: 456 HGGLLPILKETIEILFSE--GLIKALFATETFAMGINMPARTVLFTNARKYDGKDFRWIS 513
Query: 548 GSQVKQIAGRAGRRG 562
+ Q++GRAGRRG
Sbjct: 514 SGEYIQMSGRAGRRG 528
Score = 93 (37.8 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 38/154 (24%), Positives = 74/154 (48%)
Query: 303 TNSGKT----YNALQRFMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQEKKLVPF 358
T++GKT Y E ++ I+ SP++ L+ + + ++ L+TG + + P
Sbjct: 163 TSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTG-DVTINPT 221
Query: 359 SNHIACTVEMV------STDEMYDVA--VIDEIQMMSDACRGYAWTRALLGLMADEIHLC 410
++ + T E++ ++ M +VA + DEI M D+ RG W ++ L+ D +H
Sbjct: 222 ASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETII-LLPDNVHYV 280
Query: 411 GDPSVLDVVRKICSETGDELHEQ--H--YERFKP 440
+ + R+ +E LH+Q H Y ++P
Sbjct: 281 FLSATIPNARQF-AEWICHLHKQPCHVIYTDYRP 313
>ZFIN|ZDB-GENE-040426-2854 [details] [associations]
symbol:skiv2l2 "superkiller viralicidic activity
2-like 2" species:7955 "Danio rerio" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0031101 "fin regeneration"
evidence=IMP] [GO:0051781 "positive regulation of cell division"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-040426-2854 GO:GO:0005524 GO:GO:0051781 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031101
GO:GO:0008026 eggNOG:COG4581 HOGENOM:HOG000163047 KO:K12598
InterPro:IPR025696 Pfam:PF13234 CTD:23517 HOVERGEN:HBG104255
OrthoDB:EOG4D52WW EMBL:BC061456 IPI:IPI00481753 RefSeq:NP_999933.1
UniGene:Dr.75715 ProteinModelPortal:Q6P7X6 STRING:Q6P7X6
PRIDE:Q6P7X6 GeneID:406795 KEGG:dre:406795 NextBio:20818305
Bgee:Q6P7X6 Uniprot:Q6P7X6
Length = 1034
Score = 98 (39.6 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 32/121 (26%), Positives = 59/121 (48%)
Query: 444 EAKTLLGDLRNVRSGDCVVAFSRR--EIFEVKMAIEKHTNHHCCVIYGALPPETRRQQAN 501
E K L+ ++ N + DC+ ++ ++ V +++ H +G L P +
Sbjct: 408 EEKKLVEEVFN-NATDCLSDEDKKLPQVEHVLPLLKRGIGIH----HGGLLPILKETIEI 462
Query: 502 LFNDQDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPVPGSQVKQIAGRAGRR 561
LF++ L A++ MG+N+ R V+F S K++G + + Q++GRAGRR
Sbjct: 463 LFSE--GLLKALFATETFAMGINMPARTVLFTSARKFDGKDFRWISSGEYIQMSGRAGRR 520
Query: 562 G 562
G
Sbjct: 521 G 521
Score = 90 (36.7 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 30/118 (25%), Positives = 59/118 (50%)
Query: 303 TNSGKT----YNALQRFMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQEKKLVPF 358
T++GKT Y E ++ I+ SP++ L+ + + ++ L+TG + + P
Sbjct: 151 TSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTG-DVTINPT 209
Query: 359 SNHIACTVEMV------STDEMYDVA--VIDEIQMMSDACRGYAWTRALLGLMADEIH 408
++ + T E++ ++ M +VA + DEI M D+ RG W ++ L+ D +H
Sbjct: 210 ASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETII-LLPDNVH 266
>POMBASE|SPAC17H9.02 [details] [associations]
symbol:SPAC17H9.02 "TRAMP complex ATP-dependent RNA
helicase (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0006364
"rRNA processing" evidence=ISO] [GO:0016078 "tRNA catabolic
process" evidence=ISO] [GO:0031499 "TRAMP complex" evidence=ISO]
[GO:0043630 "ncRNA polyadenylation involved in
polyadenylation-dependent ncRNA catabolic process" evidence=ISO]
[GO:0071049 "nuclear retention of pre-mRNA with aberrant 3'-ends at
the site of transcription" evidence=ISO] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC17H9.02 GO:GO:0005524
EMBL:CU329670 GO:GO:0005730 GO:GO:0003676 GO:GO:0031499
GO:GO:0043630 GO:GO:0016078 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG4581
HOGENOM:HOG000163047 KO:K12598 InterPro:IPR025696 Pfam:PF13234
OrthoDB:EOG4S1XG7 GO:GO:0071049 PIR:T37868 RefSeq:NP_593572.1
ProteinModelPortal:O13799 STRING:O13799 EnsemblFungi:SPAC17H9.02.1
GeneID:2542173 KEGG:spo:SPAC17H9.02 OMA:FARWISE NextBio:20803244
Uniprot:O13799
Length = 1030
Score = 94 (38.1 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 506 QDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPVPGSQVKQIAGRAGRRG 562
Q+ +L A++ +GLN+ R V+F K++G+ + + Q++GRAGRRG
Sbjct: 456 QEGLVRILFATETFSIGLNMPARTVLFTKAQKFSGNNFRWLTSGEYMQMSGRAGRRG 512
Score = 93 (37.8 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 41/158 (25%), Positives = 76/158 (48%)
Query: 303 TNSGKT----YNALQRFMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQEKKLVPF 358
T++GKT Y Q ++ IY SP++ L+ + + ++ + L+TG + + P
Sbjct: 149 TSAGKTVIAEYAIAQALKNRQRVIYTSPIKSLSNQKYRELLSEFGDVGLMTG-DVSINPS 207
Query: 359 SNHIACTVEMV------STDEMYDVA--VIDEIQMMSDACRGYAWTRALLGLMADEIH-- 408
++ + T E++ +++ M+++A + DE+ M D RG W L+ L+ D I
Sbjct: 208 ASCLIMTTEILRAMLYKNSEIMHEIAWVIFDEVHYMRDKDRGVVWEETLI-LLPDAIRFI 266
Query: 409 -LCGD-PSVLDVVRKICSETGDELHEQ--H--YERFKP 440
L P+ L R I E+H+Q H Y ++P
Sbjct: 267 FLSATLPNALQFARWI-----SEIHKQPCHVVYTDYRP 299
>UNIPROTKB|F1MJX4 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000460 "maturation of 5.8S rRNA" evidence=IEA] [GO:0000178
"exosome (RNase complex)" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026
GeneTree:ENSGT00690000102230 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 EMBL:DAAA02050346 EMBL:DAAA02050343 EMBL:DAAA02050344
EMBL:DAAA02050345 IPI:IPI00839454 Ensembl:ENSBTAT00000047363
Uniprot:F1MJX4
Length = 937
Score = 93 (37.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 488 YGALPPETRRQQANLFNDQDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPVP 547
+G L P + LF++ L A++ MG+N+ R V+F + K++G +
Sbjct: 454 HGGLLPILKETIEILFSE--GLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWIS 511
Query: 548 GSQVKQIAGRAGRRG 562
+ Q++GRAGRRG
Sbjct: 512 SGEYIQMSGRAGRRG 526
Score = 93 (37.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 38/154 (24%), Positives = 74/154 (48%)
Query: 303 TNSGKT----YNALQRFMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQEKKLVPF 358
T++GKT Y E ++ I+ SP++ L+ + + ++ L+TG + + P
Sbjct: 161 TSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTG-DVTINPT 219
Query: 359 SNHIACTVEMV------STDEMYDVA--VIDEIQMMSDACRGYAWTRALLGLMADEIHLC 410
++ + T E++ ++ M +VA + DEI M D+ RG W ++ L+ D +H
Sbjct: 220 ASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETII-LLPDNVHYV 278
Query: 411 GDPSVLDVVRKICSETGDELHEQ--H--YERFKP 440
+ + R+ +E LH+Q H Y ++P
Sbjct: 279 FLSATIPNARQF-AEWICHLHKQPCHVIYTDYRP 311
>UNIPROTKB|F5H7E2 [details] [associations]
symbol:SKIV2L2 "Superkiller viralicidic activity 2-like 2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696
Pfam:PF13234 HGNC:HGNC:18734 ChiTaRS:SKIV2L2 EMBL:AC010480
EMBL:AC020728 IPI:IPI01011073 ProteinModelPortal:F5H7E2 SMR:F5H7E2
Ensembl:ENST00000545714 UCSC:uc011cqi.2 ArrayExpress:F5H7E2
Bgee:F5H7E2 Uniprot:F5H7E2
Length = 941
Score = 93 (37.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 488 YGALPPETRRQQANLFNDQDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPVP 547
+G L P + LF++ L A++ MG+N+ R V+F + K++G +
Sbjct: 355 HGGLLPILKETIEILFSE--GLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWIS 412
Query: 548 GSQVKQIAGRAGRRG 562
+ Q++GRAGRRG
Sbjct: 413 SGEYIQMSGRAGRRG 427
Score = 93 (37.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 38/154 (24%), Positives = 74/154 (48%)
Query: 303 TNSGKT----YNALQRFMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQEKKLVPF 358
T++GKT Y E ++ I+ SP++ L+ + + ++ L+TG + + P
Sbjct: 62 TSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTG-DVTINPT 120
Query: 359 SNHIACTVEMV------STDEMYDVA--VIDEIQMMSDACRGYAWTRALLGLMADEIHLC 410
++ + T E++ ++ M +VA + DEI M D+ RG W ++ L+ D +H
Sbjct: 121 ASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETII-LLPDNVHYV 179
Query: 411 GDPSVLDVVRKICSETGDELHEQ--H--YERFKP 440
+ + R+ +E LH+Q H Y ++P
Sbjct: 180 FLSATIPNARQF-AEWICHLHKQPCHVIYTDYRP 212
>UNIPROTKB|E2RCI5 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00690000102230 KO:K12598 OMA:ENFQKAM
InterPro:IPR025696 Pfam:PF13234 CTD:23517 EMBL:AAEX03001437
RefSeq:XP_849676.1 Ensembl:ENSCAFT00000010985 GeneID:607950
KEGG:cfa:607950 Uniprot:E2RCI5
Length = 1042
Score = 93 (37.8 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 488 YGALPPETRRQQANLFNDQDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPVP 547
+G L P + LF++ L A++ MG+N+ R V+F + K++G +
Sbjct: 456 HGGLLPILKETIEILFSE--GLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWIS 513
Query: 548 GSQVKQIAGRAGRRG 562
+ Q++GRAGRRG
Sbjct: 514 SGEYIQMSGRAGRRG 528
Score = 93 (37.8 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 38/154 (24%), Positives = 74/154 (48%)
Query: 303 TNSGKT----YNALQRFMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQEKKLVPF 358
T++GKT Y E ++ I+ SP++ L+ + + ++ L+TG + + P
Sbjct: 163 TSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTG-DVTINPT 221
Query: 359 SNHIACTVEMV------STDEMYDVA--VIDEIQMMSDACRGYAWTRALLGLMADEIHLC 410
++ + T E++ ++ M +VA + DEI M D+ RG W ++ L+ D +H
Sbjct: 222 ASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETII-LLPDNVHYV 280
Query: 411 GDPSVLDVVRKICSETGDELHEQ--H--YERFKP 440
+ + R+ +E LH+Q H Y ++P
Sbjct: 281 FLSATIPNARQF-AEWICHLHKQPCHVIYTDYRP 313
>UNIPROTKB|P42285 [details] [associations]
symbol:SKIV2L2 "Superkiller viralicidic activity 2-like 2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0000178 "exosome (RNase complex)"
evidence=IDA] [GO:0000460 "maturation of 5.8S rRNA" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000460 GO:GO:0008026 eggNOG:COG4581 HOGENOM:HOG000163047
KO:K12598 OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 EMBL:D29641
EMBL:BX640789 EMBL:BC014669 EMBL:BC028604 EMBL:BC031779
EMBL:BC065258 EMBL:BC104996 EMBL:BC113509 IPI:IPI00647217
RefSeq:NP_056175.3 UniGene:Hs.274531 ProteinModelPortal:P42285
SMR:P42285 IntAct:P42285 STRING:P42285 PhosphoSite:P42285
DMDM:71153172 SWISS-2DPAGE:P42285 PaxDb:P42285 PeptideAtlas:P42285
PRIDE:P42285 DNASU:23517 Ensembl:ENST00000230640 GeneID:23517
KEGG:hsa:23517 UCSC:uc003jpy.4 CTD:23517 GeneCards:GC05P054605
HGNC:HGNC:18734 HPA:HPA037379 neXtProt:NX_P42285
PharmGKB:PA134901921 HOVERGEN:HBG104255 InParanoid:P42285
OrthoDB:EOG4D52WW PhylomeDB:P42285 ChiTaRS:SKIV2L2 GenomeRNAi:23517
NextBio:45957 ArrayExpress:P42285 Bgee:P42285 CleanEx:HS_SKIV2L2
Genevestigator:P42285 GermOnline:ENSG00000039123 Uniprot:P42285
Length = 1042
Score = 93 (37.8 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 488 YGALPPETRRQQANLFNDQDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPVP 547
+G L P + LF++ L A++ MG+N+ R V+F + K++G +
Sbjct: 456 HGGLLPILKETIEILFSE--GLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWIS 513
Query: 548 GSQVKQIAGRAGRRG 562
+ Q++GRAGRRG
Sbjct: 514 SGEYIQMSGRAGRRG 528
Score = 93 (37.8 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 38/154 (24%), Positives = 74/154 (48%)
Query: 303 TNSGKT----YNALQRFMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQEKKLVPF 358
T++GKT Y E ++ I+ SP++ L+ + + ++ L+TG + + P
Sbjct: 163 TSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTG-DVTINPT 221
Query: 359 SNHIACTVEMV------STDEMYDVA--VIDEIQMMSDACRGYAWTRALLGLMADEIHLC 410
++ + T E++ ++ M +VA + DEI M D+ RG W ++ L+ D +H
Sbjct: 222 ASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETII-LLPDNVHYV 280
Query: 411 GDPSVLDVVRKICSETGDELHEQ--H--YERFKP 440
+ + R+ +E LH+Q H Y ++P
Sbjct: 281 FLSATIPNARQF-AEWICHLHKQPCHVIYTDYRP 313
>UNIPROTKB|F1SLL6 [details] [associations]
symbol:SKIV2L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000460 "maturation of 5.8S rRNA" evidence=IEA] [GO:0000178
"exosome (RNase complex)" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026
GeneTree:ENSGT00690000102230 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 EMBL:FP236391 EMBL:CU929534 Ensembl:ENSSSCT00000018417
Uniprot:F1SLL6
Length = 1046
Score = 93 (37.8 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 488 YGALPPETRRQQANLFNDQDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPVP 547
+G L P + LF++ L A++ MG+N+ R V+F + K++G +
Sbjct: 457 HGGLLPILKETIEILFSE--GLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWIS 514
Query: 548 GSQVKQIAGRAGRRG 562
+ Q++GRAGRRG
Sbjct: 515 SGEYIQMSGRAGRRG 529
Score = 93 (37.8 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 38/154 (24%), Positives = 74/154 (48%)
Query: 303 TNSGKT----YNALQRFMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQEKKLVPF 358
T++GKT Y E ++ I+ SP++ L+ + + ++ L+TG + + P
Sbjct: 164 TSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTG-DVTINPT 222
Query: 359 SNHIACTVEMV------STDEMYDVA--VIDEIQMMSDACRGYAWTRALLGLMADEIHLC 410
++ + T E++ ++ M +VA + DEI M D+ RG W ++ L+ D +H
Sbjct: 223 ASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETII-LLPDNVHYV 281
Query: 411 GDPSVLDVVRKICSETGDELHEQ--H--YERFKP 440
+ + R+ +E LH+Q H Y ++P
Sbjct: 282 FLSATIPNARQF-AEWICHLHKQPCHVIYTDYRP 314
>SGD|S000004390 [details] [associations]
symbol:SKI2 "Ski complex component and putative RNA helicase"
species:4932 "Saccharomyces cerevisiae" [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0070478
"nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic
nonsense-mediated decay" evidence=IGI;IMP] [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0055087 "Ski
complex" evidence=IDA;IPI] [GO:0034427 "nuclear-transcribed mRNA
catabolic process, exonucleolytic, 3'-5'" evidence=IMP] [GO:0070481
"nuclear-transcribed mRNA catabolic process, non-stop decay"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 SGD:S000004390 GO:GO:0005524
GO:GO:0006417 GO:GO:0003677 EMBL:BK006945 GO:GO:0051607
GO:GO:0003723 EMBL:U19729 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:Z18944 EMBL:L13469 GO:GO:0008026 GO:GO:0003724
GO:GO:0070478 GO:GO:0070481 eggNOG:COG4581 KO:K05544
RefSeq:NP_013505.4 GeneID:851117 KEGG:sce:YLR401C
InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087 HOGENOM:HOG000163048
KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R PIR:S55954
RefSeq:NP_013502.3 PDB:4A4K PDB:4A4Z PDBsum:4A4K PDBsum:4A4Z
ProteinModelPortal:P35207 SMR:P35207 DIP:DIP-5887N IntAct:P35207
MINT:MINT-662639 STRING:P35207 PaxDb:P35207 PeptideAtlas:P35207
EnsemblFungi:YLR398C GeneID:851114 KEGG:sce:YLR398C CYGD:YLR398c
GeneTree:ENSGT00690000102154 NextBio:967830 Genevestigator:P35207
GermOnline:YLR398C Uniprot:P35207
Length = 1287
Score = 113 (44.8 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 486 VIYGALPPETRRQQANLFNDQDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIP 545
V +G L P + LF+ VL A++ MGLNL R V+F S+ K++G+ +
Sbjct: 694 VHHGGLLPIVKELIEILFSK--GFIKVLFATETFAMGLNLPTRTVIFSSIRKHDGNGLRE 751
Query: 546 VPGSQVKQIAGRAGRRG 562
+ + Q+AGRAGRRG
Sbjct: 752 LTPGEFTQMAGRAGRRG 768
Score = 83 (34.3 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 32/120 (26%), Positives = 56/120 (46%)
Query: 297 IYHCGPTNSGKT----YNALQRFMEAKKGIYCSPLRLLAMEVF-D-KVNALGVYCSLLTG 350
++ T++GKT Y K IY SP++ L+ + F D K V L+TG
Sbjct: 347 VFVAAHTSAGKTVVAEYAIAMAHRNMTKTIYTSPIKALSNQKFRDFKETFDDVNIGLITG 406
Query: 351 QEKKLVPFSNHIACTVEMVST------DEMYDV--AVIDEIQMMSDACRGYAWTRALLGL 402
+ ++ P +N + T E++ + D + DV + DE+ ++D RG W ++ L
Sbjct: 407 -DVQINPDANCLIMTTEILRSMLYRGADLIRDVEFVIFDEVHYVNDQDRGVVWEEVIIML 465
Score = 37 (18.1 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 15/72 (20%), Positives = 28/72 (38%)
Query: 703 KNDAELLDLETKHQVLSMYLWLSHQFKEEVFPYAKKAEAMATDIAELLGQSLTNANWKPE 762
+++AE LD + + +Y W +E+ + +AE + L + K
Sbjct: 1198 QDEAEFLDRKRFAMMNVVYEWARGLSFKEIMEMSPEAEGTVVRVITWLDEICREV--KTA 1255
Query: 763 SRQAGKPKLHQQ 774
S G LH +
Sbjct: 1256 SIIIGNSTLHMK 1267
>FB|FBgn0001986 [details] [associations]
symbol:l(2)35Df "lethal (2) 35Df" species:7227 "Drosophila
melanogaster" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG4581 GeneTree:ENSGT00690000102230 KO:K12598
OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 EMBL:AF145638
RefSeq:NP_524929.1 UniGene:Dm.1748 SMR:Q9Y134 MINT:MINT-942655
STRING:Q9Y134 EnsemblMetazoa:FBtr0080760 GeneID:48782
KEGG:dme:Dmel_CG4152 UCSC:CG4152-RA FlyBase:FBgn0001986
InParanoid:Q9Y134 OrthoDB:EOG4K3JB5 GenomeRNAi:48782 NextBio:839548
Uniprot:Q9Y134
Length = 1055
Score = 101 (40.6 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 488 YGALPPETRRQQANLFNDQDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPVP 547
+G L P + LF + L A++ MGLN+ R V+F + K++G K +
Sbjct: 472 HGGLLPILKETIEILFGE--GLIKALFATETFAMGLNMPARTVLFTAPRKFDGKKFRWIS 529
Query: 548 GSQVKQIAGRAGRRG 562
+ Q+AGRAGRRG
Sbjct: 530 SGEYIQMAGRAGRRG 544
Score = 84 (34.6 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 40/154 (25%), Positives = 73/154 (47%)
Query: 303 TNSGKTY---NALQRFMEAKKG-IYCSPLRLLAMEVFDKVNALGVYCSLLTGQEKKLVPF 358
T++GKT A+ + + AK+ IY +P++ L+ + F + L+TG + + P
Sbjct: 175 TSAGKTVVAEYAIAKSLAAKQRVIYTTPIKALSNQKFREFTDEFKDVGLVTG-DVTINPS 233
Query: 359 SNHIACTVEMV------STDEMYDVA--VIDEIQMMSDACRGYAWTRALLGLMADEIHLC 410
++ + T E++ ++ M +V V DEI M D RG W L+ L+ D +
Sbjct: 234 ASCLIMTTEILRNMLYRGSEIMREVGWVVFDEIHYMRDKERGVVWEETLI-LLPDNVRYV 292
Query: 411 GDPSVLDVVRKICSETGDELHEQ--H--YERFKP 440
+ + R+ +E LH+Q H Y ++P
Sbjct: 293 FLSATIPNARQF-AEWVCHLHKQPCHVVYTDYRP 325
>CGD|CAL0002171 [details] [associations]
symbol:orf19.6425 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0055087 "Ski complex" evidence=IEA]
[GO:0070478 "nuclear-transcribed mRNA catabolic process, 3'-5'
exonucleolytic nonsense-mediated decay" evidence=IEA] [GO:0070481
"nuclear-transcribed mRNA catabolic process, non-stop decay"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
CGD:CAL0002171 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000073
EMBL:AACQ01000072 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG4581 KO:K12599 RefSeq:XP_716180.1
RefSeq:XP_716263.1 ProteinModelPortal:Q5A337 STRING:Q5A337
GeneID:3642143 GeneID:3642220 KEGG:cal:CaO19.13783
KEGG:cal:CaO19.6425 Uniprot:Q5A337
Length = 1245
Score = 105 (42.0 bits), Expect = 8.7e-05, Sum P(3) = 8.7e-05
Identities = 31/96 (32%), Positives = 49/96 (51%)
Query: 467 REIFEVKMAIEKHTNHHCCVIYGALPPETRRQQANLFNDQDNEFDVLVASDAVGMGLNLN 526
RE+ ++ + I + V +G L P + LF + VL A++ MGLNL
Sbjct: 629 RELPQI-LKIREMLGRGIAVHHGGLLPIVKECIEILF--AKSLVKVLFATETFAMGLNLP 685
Query: 527 IRRVVFYSLSKYNGDKIIPVPGSQVKQIAGRAGRRG 562
R V+F S+ K++G + + Q++GRAGRRG
Sbjct: 686 TRTVIFSSMRKHDGRSFRNLLPGEFTQMSGRAGRRG 721
Score = 84 (34.6 bits), Expect = 8.7e-05, Sum P(3) = 8.7e-05
Identities = 31/125 (24%), Positives = 59/125 (47%)
Query: 297 IYHCGPTNSGKT----YNALQRFMEAKKGIYCSPLRLLAMEVF-D-KVNALGVYCSLLTG 350
++ T++GKT Y K IY SP++ L+ + F D K + L+TG
Sbjct: 307 VFVAAHTSAGKTVVAEYAIAMAHRNMTKCIYTSPIKALSNQKFRDFKETFKDIDVGLITG 366
Query: 351 QEKKLVPFSNHIACTVEMVST------DEMYDV--AVIDEIQMMSDACRGYAWTRALLGL 402
+ ++ P +N + T E++ + D + DV + DE+ ++D RG W ++ +
Sbjct: 367 -DVQINPEANCLIMTTEILRSMLYRGADLIRDVEFVIFDEVHYVNDIDRGVVWEEVII-M 424
Query: 403 MADEI 407
+ D +
Sbjct: 425 LPDHV 429
Score = 43 (20.2 bits), Expect = 8.7e-05, Sum P(3) = 8.7e-05
Identities = 19/88 (21%), Positives = 34/88 (38%)
Query: 635 LCRHDHIKKVANMLEKVQ--GLSLEDRFNFCFAPVN----IRDPKAMYHLLRFASSYSKN 688
L DH K +EK + + + D F + +R Y + F YS
Sbjct: 887 LLTFDHGKDYEEAIEKYKLPYIPIRDYITKNFPKIKFSGRLRVVLVPYENICFIGRYSLK 946
Query: 689 APVSIAMGMPKGSAKNDAELLDLETKHQ 716
V+ + K + + +E + + TK+Q
Sbjct: 947 TSVNSIINNEKSAVQEASEQIQILTKYQ 974
>DICTYBASE|DDB_G0275633 [details] [associations]
symbol:DDB_G0275633 "superkiller viralicidic activity
2-like protein" species:44689 "Dictyostelium discoideum"
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275633 GO:GO:0005524
GO:GO:0003676 EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 KO:K12598 OMA:ENFQKAM
InterPro:IPR025696 Pfam:PF13234 RefSeq:XP_643574.1
ProteinModelPortal:Q86IE2 STRING:Q86IE2 EnsemblProtists:DDB0233453
GeneID:8620161 KEGG:ddi:DDB_G0275633 InParanoid:Q86IE2
ProtClustDB:CLSZ2444279 Uniprot:Q86IE2
Length = 1128
Score = 100 (40.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 19/50 (38%), Positives = 34/50 (68%)
Query: 513 LVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPVPGSQVKQIAGRAGRRG 562
L A++ +GLN+ + V+F S+ K++G+ + + G + Q++GRAGRRG
Sbjct: 552 LFATETFSIGLNMPAKTVIFTSVRKFDGEGMRWISGGEYIQMSGRAGRRG 601
Score = 84 (34.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 40/197 (20%), Positives = 86/197 (43%)
Query: 264 PDEIKRFRAMIESADLTKPHTWFPFARVMKRKIIYHCGPTNSGKT----YNALQRFMEAK 319
P+ IK R D P A + + + + T++GKT Y+ + +
Sbjct: 199 PEPIKPARTYPFKLD---PFQATSIACIERNESVLVSAHTSAGKTVVAEYSIATALRDGQ 255
Query: 320 KGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQEKKLVPFSNHIACTVEMV------STDE 373
+ IY SP++ L+ + F + L+TG + + ++ + T E++ ++
Sbjct: 256 RVIYTSPIKALSNQKFRDLQETFQDVGLMTG-DITINANASCLVMTTEILRSMLYRGSET 314
Query: 374 MYDVA--VIDEIQMMSDACRGYAWTRALLGLMADEIHLCGDPSVLDVVRKICSETGDELH 431
M +V+ + DEI + D RG W ++ L+ D + + + R+ + ++H
Sbjct: 315 MREVSWVIFDEIHYLRDKERGVVWEETII-LLPDSVKFVFLSATIPNAREFAAWIA-KIH 372
Query: 432 EQ--H--YERFKPLVVE 444
+Q H Y ++P+ ++
Sbjct: 373 KQPCHVVYTEYRPIPLQ 389
>WB|WBGene00012342 [details] [associations]
symbol:mtr-4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0040011 InterPro:IPR018247
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0040020 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0040022 GO:GO:0008026 eggNOG:COG4581 EMBL:Z70271 PIR:T26282
RefSeq:NP_501757.1 ProteinModelPortal:Q23223 SMR:Q23223
MINT:MINT-6670291 STRING:Q23223 PaxDb:Q23223 EnsemblMetazoa:W08D2.7
GeneID:177824 KEGG:cel:CELE_W08D2.7 CTD:177824 WormBase:W08D2.7
GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047 InParanoid:Q23223
KO:K12598 OMA:ENFQKAM NextBio:898538 InterPro:IPR025696
Pfam:PF13234 Uniprot:Q23223
Length = 1026
Score = 103 (41.3 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 512 VLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPVPGSQVKQIAGRAGRRG 562
VL A++ MGLN+ R VVF S K++G + + Q+AGRAGRRG
Sbjct: 465 VLFATETFSMGLNMPARTVVFTSARKFDGSDNRYITSGEYIQMAGRAGRRG 515
Score = 82 (33.9 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 32/117 (27%), Positives = 57/117 (48%)
Query: 303 TNSGKT----YNALQRFMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQEKKLVPF 358
T++GKT Y + E ++ IY SP++ L+ + + ++ L+TG + L P
Sbjct: 149 TSAGKTVVATYAIAKCLREKQRVIYTSPIKALSNQKYRELEEEFKDVGLMTG-DVTLNPD 207
Query: 359 SNHIACTVEMV------STDEMYDVA--VIDEIQMMSDACRGYAWTRALLGLMADEI 407
++ + T E++ ++ M +V V DEI M D RG W ++ LM+ I
Sbjct: 208 ASCLVMTTEILRSMLYRGSEIMKEVGWVVYDEIHYMRDKERGVVWEETII-LMSKNI 263
Score = 42 (19.8 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 411 GDPSVLDVVRKICSETG 427
GD +VL ++R + S G
Sbjct: 357 GDSNVLKIIRSVASNDG 373
>ZFIN|ZDB-GENE-010430-5 [details] [associations]
symbol:skiv2l "superkiller viralicidic activity 2 (S.
cerevisiae homolog)-like" species:7955 "Danio rerio" [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-010430-5 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
GeneTree:ENSGT00690000102154 EMBL:FP102194 EMBL:FP067438
IPI:IPI00490616 Ensembl:ENSDART00000089609 OMA:TIMASAD Bgee:F1R881
Uniprot:F1R881
Length = 1249
Score = 101 (40.6 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 512 VLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPV-PGSQVKQIAGRAGRRG 562
VL A++ MG+N+ R VVF S+ K++G + PG + Q+AGRAGRRG
Sbjct: 667 VLFATETFAMGVNMPARTVVFDSIRKHDGTGFRNLLPGEYI-QMAGRAGRRG 717
Score = 83 (34.3 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 33/119 (27%), Positives = 58/119 (48%)
Query: 297 IYHCGPTNSGKTYNALQRFMEAKKG----IYCSPLRLLAMEVF-DKVNALGVYCSLLTGQ 351
++ T++GKT A ++K IY SP++ L+ + F D N G LLTG
Sbjct: 336 VFVAAHTSAGKTVVAEYAIALSQKHMTRTIYTSPIKALSNQKFRDFKNTFGDV-GLLTG- 393
Query: 352 EKKLVPFSNHIACTVEMV------STDEMYDV--AVIDEIQMMSDACRGYAWTRALLGL 402
+ +L P + + T E++ ++ + D+ + DE+ ++DA RG W L+ L
Sbjct: 394 DVQLNPEGSCLIMTTEILRSMLYNGSEVIRDLEWVIFDEVHYINDAERGVVWEEVLIML 452
Score = 44 (20.5 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 96 NNGTATKPKVEDVEQESGVN 115
N G+ T+ K +++E+E G N
Sbjct: 269 NTGSLTEQKKKNLEEEKGDN 288
>TAIR|locus:2026001 [details] [associations]
symbol:MTR4 "homolog of yeast MTR4" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IMP]
[GO:0031125 "rRNA 3'-end processing" evidence=IMP] [GO:0000398
"mRNA splicing, via spliceosome" evidence=RCA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009909 "regulation of
flower development" evidence=RCA] [GO:0010074 "maintenance of
meristem identity" evidence=RCA] [GO:0010212 "response to ionizing
radiation" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0030422 "production of
siRNA involved in RNA interference" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0043687 "post-translational protein modification"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0048825 "cotyledon development"
evidence=RCA] [GO:0051301 "cell division" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
EMBL:AC007258 UniGene:At.74832 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0031125 eggNOG:COG4581
HOGENOM:HOG000163047 KO:K12598 OMA:ENFQKAM InterPro:IPR025696
Pfam:PF13234 EMBL:AK176836 IPI:IPI00536033 PIR:E96621
RefSeq:NP_176185.1 UniGene:At.43462 ProteinModelPortal:Q9XIF2
SMR:Q9XIF2 PaxDb:Q9XIF2 PRIDE:Q9XIF2 EnsemblPlants:AT1G59760.1
GeneID:842269 KEGG:ath:AT1G59760 TAIR:At1g59760 InParanoid:Q9XIF2
PhylomeDB:Q9XIF2 ProtClustDB:CLSN2679700 ArrayExpress:Q9XIF2
Genevestigator:Q9XIF2 Uniprot:Q9XIF2
Length = 988
Score = 102 (41.0 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 21/57 (36%), Positives = 35/57 (61%)
Query: 506 QDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPVPGSQVKQIAGRAGRRG 562
Q+ L A++ +GLN+ + VVF ++ K++GDK + + Q++GRAGRRG
Sbjct: 406 QEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWLSSGEYIQMSGRAGRRG 462
Score = 77 (32.2 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 27/110 (24%), Positives = 53/110 (48%)
Query: 303 TNSGKT----YNALQRFMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQEKKLVPF 358
T++GKT Y E ++ IY SP++ L+ + + L+TG + + P
Sbjct: 91 TSAGKTVVASYAIAMSLKENQRVIYTSPIKALSNQKYRDFKEEFSDVGLMTG-DVTIDPN 149
Query: 359 SNHIACTVEMV------STDEMYDVA--VIDEIQMMSDACRGYAWTRALL 400
++ + T E++ ++ M +VA + DE+ M D+ RG W +++
Sbjct: 150 ASCLVMTTEILRSMQYKGSEIMREVAWIIFDEVHYMRDSERGVVWEESIV 199
>DICTYBASE|DDB_G0277211 [details] [associations]
symbol:DDB_G0277211 "superkiller viralicidic activity
2-like protein" species:44689 "Dictyostelium discoideum"
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0277211 GO:GO:0005524
GO:GO:0003676 EMBL:AAFI02000019 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 InterPro:IPR025696
Pfam:PF13234 KO:K12599 OMA:TRLDETC RefSeq:XP_642686.1
ProteinModelPortal:Q86K90 EnsemblProtists:DDB0233454 GeneID:8620875
KEGG:ddi:DDB_G0277211 InParanoid:Q86K90 Uniprot:Q86K90
Length = 1378
Score = 99 (39.9 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 30/96 (31%), Positives = 51/96 (53%)
Query: 468 EIFEVKMAIEKHTNHHCCVIYGALPPETRRQQANLFNDQDNEFDVLVASDAVGMGLNLNI 527
+I ++K +E+ H +G L P + LF+ + VL A++ MG+N+
Sbjct: 744 QILQMKELLERGIGVH----HGGLLPIVKELVEILFSK--SLVKVLFATETFAMGVNMPA 797
Query: 528 RRVVFYSLSKYNGDKIIP-VPGSQVKQIAGRAGRRG 562
+ VV+ S K++G +PG + Q++GRAGRRG
Sbjct: 798 KTVVYSSTRKHDGITFRDLIPG-EYTQMSGRAGRRG 832
Score = 83 (34.3 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 32/113 (28%), Positives = 55/113 (48%)
Query: 303 TNSGKTYNALQRF-MEAK---KGIYCSPLRLLAMEVF-DKVNALGVYCSLLTGQEKKLVP 357
T++GKT A M AK + IY SP++ L+ + F D N L+TG + + P
Sbjct: 457 TSAGKTVIAEYAIAMAAKNMTRAIYTSPIKALSNQKFRDFKNTFNDV-GLITG-DVSISP 514
Query: 358 FSNHIACTVEMVST------DEMYDV--AVIDEIQMMSDACRGYAWTRALLGL 402
S+ + T E++ + D + D+ + DE+ ++D RG W ++ L
Sbjct: 515 SSSCLVLTTEILRSMLYKGADLIRDIEWVIFDEVHYLNDLERGVVWEEVIIML 567
>FB|FBgn0039117 [details] [associations]
symbol:tst "twister" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IMP] [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 EMBL:AJ276896
ProteinModelPortal:Q9BI21 SMR:Q9BI21 STRING:Q9BI21 PaxDb:Q9BI21
PRIDE:Q9BI21 FlyBase:FBgn0039117 InParanoid:Q9BI21
OrthoDB:EOG46HDRK ArrayExpress:Q9BI21 Bgee:Q9BI21 Uniprot:Q9BI21
Length = 1197
Score = 102 (41.0 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 31/96 (32%), Positives = 52/96 (54%)
Query: 468 EIFEVKMAIEKHTNHHCCVIYGALPPETRRQQANLFNDQDNEFDVLVASDAVGMGLNLNI 527
++ +K A+E+ H + + P + LF Q+ +L A++ MG+N+
Sbjct: 570 QVLVLKDALERGIGVH----HSGILPILKEIVEMLF--QNGLVKLLFATETFAMGVNMPA 623
Query: 528 RRVVFYSLSKYNGDKIIPV-PGSQVKQIAGRAGRRG 562
R VVF S K++G ++ + PG + Q+AGRAGRRG
Sbjct: 624 RTVVFDSCKKFDGLEMRNLKPGEYI-QMAGRAGRRG 658
Score = 78 (32.5 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 26/132 (19%), Positives = 65/132 (49%)
Query: 290 RVMKRKIIYHCGPTNSGKTYNALQRFMEAKKG----IYCSPLRLLAMEVFDKVNALGVYC 345
++ +R+ ++ T++GKT A +K+ IY SP++ L+ + +
Sbjct: 273 KLEQRQYVFVAAHTSAGKTVVAEYAIALSKRDLTRTIYTSPIKALSNQKYRDFRKTFKDV 332
Query: 346 SLLTGQEKKLVPFSNHIACTVEMV------STDEMYDV--AVIDEIQMMSDACRGYAWTR 397
L+TG + ++ P ++ + T E++ +D D+ + DE+ +++ RG+ W
Sbjct: 333 GLITG-DLQIEPTASCLIMTTEILRSMLYCGSDVTRDLEWVIFDEVHYINNPERGHVWEE 391
Query: 398 ALLGLMADEIHL 409
++ L+ + +++
Sbjct: 392 VII-LLPEHVNI 402
>GENEDB_PFALCIPARUM|PFF0100w [details] [associations]
symbol:PFF0100w "putative ATP dependent RNA
helicase" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AL844505 HOGENOM:HOG000163047 KO:K12598
InterPro:IPR025696 Pfam:PF13234 RefSeq:XP_966011.1
ProteinModelPortal:C6KSM1 EnsemblProtists:PFF0100w:mRNA
GeneID:3885738 KEGG:pfa:PFF0100w EuPathDB:PlasmoDB:PF3D7_0602100
OMA:RGIVIIM ProtClustDB:CLSZ2433467 Uniprot:C6KSM1
Length = 1350
Score = 109 (43.4 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 488 YGALPPETRRQQANLFNDQDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYNG-DKIIPV 546
+G L P + +F Q++ VL +++ MG+N+ + VVF SL+K++G +K +
Sbjct: 577 HGGLLPIIKEIIEIMF--QESLLKVLFSTETFSMGINMPAKTVVFTSLTKFDGLEKRLIT 634
Query: 547 PGSQVKQIAGRAGRRG 562
G + Q+AGRAGRRG
Sbjct: 635 SGEYI-QMAGRAGRRG 649
Score = 71 (30.1 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 40/154 (25%), Positives = 65/154 (42%)
Query: 303 TNSGKT----YNALQRFMEAKKGIYCSPLRLLAMEVFDKVNALGVYCSLLTGQEKKLVPF 358
T++GKT Y + ++ IY SP++ L+ + + + L+TG + + P
Sbjct: 278 TSAGKTVIAEYAIALGLRDKQRVIYTSPIKALSNQKYRDLGEEFKDVGLITG-DISINPE 336
Query: 359 SNHIACTVEMVS---------TDEMYDVAVIDEIQMMSDACRGYAW--TRALLGLMADEI 407
++ I T E++ T E+ V + DEI M D RG W T LL LM I
Sbjct: 337 ASIIVMTTEILRSMLYRGSSLTKEVKWV-IFDEIHYMRDRDRGVIWEETIILLPLMVRFI 395
Query: 408 HLCGD-PSVLDVVRKICSETGDELHEQHYERFKP 440
L P+ + + S H Y ++P
Sbjct: 396 FLSATIPNGIQFAEWVSSIKSQACHIV-YTDYRP 428
>ASPGD|ASPL0000004985 [details] [associations]
symbol:AN6007 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000102 GO:GO:0008026 eggNOG:COG4581
HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R
RefSeq:XP_663611.1 ProteinModelPortal:Q5B0C3 STRING:Q5B0C3
EnsemblFungi:CADANIAT00007011 GeneID:2871132 KEGG:ani:AN6007.2
Uniprot:Q5B0C3
Length = 1293
Score = 100 (40.3 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 512 VLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPVPGSQVKQIAGRAGRRG 562
VL A++ MGLNL R VVF K++G + + Q+AGRAGRRG
Sbjct: 719 VLFATETFAMGLNLPTRTVVFSGFRKHDGKGFRDLLPGEYTQMAGRAGRRG 769
Score = 78 (32.5 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 32/119 (26%), Positives = 58/119 (48%)
Query: 297 IYHCGPTNSGKTYNALQRF-MEAK---KGIYCSPLRLLAMEVF-DKVNALGVYCSLLTGQ 351
++ T++GKT A + AK K IY SP++ L+ + F D N +LTG
Sbjct: 340 VFVAAHTSAGKTVVAEYAIALAAKHMTKAIYTSPIKALSNQKFRDFKNTFDDV-GILTG- 397
Query: 352 EKKLVPFSNHIACTVEMVST------DEMYDV--AVIDEIQMMSDACRGYAWTRALLGL 402
+ ++ P ++ + T E++ + D + DV + DE+ ++D RG W ++ L
Sbjct: 398 DVQINPEASCLIMTTEILRSMLYRGADLIRDVEFVIFDEVHYVNDLERGVVWEEVIIML 456
>UNIPROTKB|Q10701 [details] [associations]
symbol:helY "Probable helicase HelY" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012961 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842578 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG4581 PIR:G70767 RefSeq:NP_216608.1 RefSeq:NP_336620.1
RefSeq:YP_006515507.1 ProteinModelPortal:Q10701 SMR:Q10701
PRIDE:Q10701 EnsemblBacteria:EBMYCT00000003887
EnsemblBacteria:EBMYCT00000069683 GeneID:13316898 GeneID:887736
GeneID:924573 KEGG:mtc:MT2153 KEGG:mtu:Rv2092c KEGG:mtv:RVBD_2092c
PATRIC:18126496 TubercuList:Rv2092c HOGENOM:HOG000245391 KO:K03727
OMA:ANESAWQ ProtClustDB:CLSK791623 Uniprot:Q10701
Length = 906
Score = 104 (41.7 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 19/48 (39%), Positives = 32/48 (66%)
Query: 515 ASDAVGMGLNLNIRRVVFYSLSKYNGDKIIPVPGSQVKQIAGRAGRRG 562
A++ + +G+N+ R VV L K+NG++ +P+ + Q+ GRAGRRG
Sbjct: 369 ATETLALGINMPARTVVLERLVKFNGEQHMPLTPGEYTQLTGRAGRRG 416
Score = 70 (29.7 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 30/119 (25%), Positives = 51/119 (42%)
Query: 300 CGPTNSGKTYN---ALQRFMEA-KKGIYCSPLRLLAMEVFDKVNA-LGV-YCSLLTGQ-- 351
C PT +GKT A+ + A K Y +PL+ L+ + + A G LLTG
Sbjct: 38 CAPTGAGKTVVGEFAVHLALAAGSKCFYTTPLKALSNQKHTDLTARYGRDQIGLLTGDLS 97
Query: 352 ---EKKLVPFSNHIACTVEMVSTDEMYDVA--VIDEIQMMSDACRGYAWTRALLGLMAD 405
+V + + + + + ++ V+DE+ ++D RG W +L L D
Sbjct: 98 VNGNAPVVVMTTEVLRNMLYADSPALQGLSYVVMDEVHFLADRMRGPVWEEVILQLPDD 156
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 809 796 0.00097 121 3 11 22 0.37 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 66
No. of states in DFA: 625 (66 KB)
Total size of DFA: 409 KB (2199 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 66.20u 0.13s 66.33t Elapsed: 00:00:03
Total cpu time: 66.21u 0.13s 66.34t Elapsed: 00:00:03
Start: Mon May 20 18:52:54 2013 End: Mon May 20 18:52:57 2013