Query 003589
Match_columns 808
No_of_seqs 564 out of 4529
Neff 7.3
Searched_HMMs 29240
Date Tue Mar 26 18:11:10 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003589.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1638-1641//hhsearch_pdb/003589hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1tvc_A Methane monooxygenase c 1.0 1 1 177.7 14.8 175 598-796 8-204 (250)
2 4fk8_A Ferredoxin--NADP reduct 1.0 1 1 177.5 14.3 172 598-794 17-212 (271)
3 3pm8_A PFCDPK2, calcium-depend 1.0 1 1 176.4 8.7 174 108-316 18-196 (197)
4 3lo8_A Ferredoxin--NADP reduct 1.0 1 1 174.4 17.5 172 600-794 28-251 (311)
5 3jqq_A Ferredoxin NADP reducta 1.0 1 1 173.5 15.5 170 601-794 16-265 (316)
6 1qfj_A Protein (flavin reducta 1.0 1 1 172.6 18.4 171 601-796 3-189 (232)
7 3vo2_A Putative uncharacterize 1.0 1 1 172.0 17.2 171 601-794 34-249 (310)
8 1krh_A Benzoate 1,2-dioxygenas 1.0 1 1 171.6 17.6 169 599-793 107-293 (338)
9 4eh1_A Flavohemoprotein; struc 1.0 1 1 171.3 18.3 170 599-793 2-195 (243)
10 2eix_A NADH-cytochrome B5 redu 1.0 1 1 170.3 18.7 176 599-797 10-205 (243)
No 1
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=1.00 E-value=1 Score=177.68 Aligned_cols=175 Identities=18% Similarity=0.243 Sum_probs=137.4
Q ss_pred CCCEEEEEEEEEEECCCEEEEEEEC-C-C----CCCCCCCCEEEEEECCCCCCEEEEEEEEECCC-CCEEEEEEEEC--C
Q ss_conf 1620079999997559999999976-9-9----84348997899996248997045338423299-99399999982--9
Q 003589 598 SSIKAVSIQKVAVYPGNVLALHMSK-P-D----RFRYKSGQYMFVNCAAVSPFEWHPFSITSAPD-DDYLSVHIRTL--G 668 (808)
Q Consensus 598 ~~~~~~~i~~v~~l~~~v~~l~l~~-p-~----~~~~~pGQyv~l~~p~~s~~e~HPFSIas~p~-~~~l~l~Ik~~--g 668 (808)
...+.++|++++.+++++..+++.. | . .+.|+||||+.|.+|.. .++|||||+|.|. ++.++|+||.. |
T Consensus 8 ~~~~~~~V~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~pGQ~v~l~~~~~--~~~R~ySi~s~~~~~~~l~i~vk~~~~G 85 (250)
T 1tvc_A 8 VGSFEAEVVGLNWVSSNTVQFLLQKRPDECGNRGVKFEPGQFMDLTIPGT--DVSRSYSPANLPNPEGRLEFLIRVLPEG 85 (250)
T ss_dssp SSEEEEEBCCCEEEETTEEEEEECSSTTSSSSSCCSCCSCCEEEECTTSC--SSSEEECCBCCSSSSCCEEEEECCCTTS
T ss_pred CCEEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCC--CCCCCCCCCCCCCCCCEEEEEEEECCCC
T ss_conf 42699999999986899699999945877766656838986799995898--6510541277998998699999988998
Q ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCC
Q ss_conf 95077879842106999998866422369999889996655899989889984999990646888999999999802456
Q 003589 669 DWTRQLRTVFSEVCRPPPNGISGLLRAEGHNNPEVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDIVNNMKAI 748 (808)
Q Consensus 669 ~~T~~L~~~~~~~~~~~~~g~s~~~~~~~~~~~~v~i~GPyG~~~~~~~~~~~vllIagGiGITP~lsil~~l~~~~~~~ 748 (808)
.+|+.|.+.++ .++.+.|.||||.+......+++++|||||+||||++++++++..+....
T Consensus 86 ~~s~~l~~~l~-------------------~Gd~v~v~gP~G~~~~~~~~~~~~vliagGtGiaP~~~~l~~l~~~~~~~ 146 (250)
T 1tvc_A 86 RFSDYLRNDAR-------------------VGQVLSVKGPLGVFGLKERGMAPRYFVAGGTGLAPVVSMVRQMQEWTAPN 146 (250)
T ss_dssp SSHHHHHHHSS-------------------SSSEEEEEEEECCCSCCCCSSSCEEEEEESSTTHHHHHHHHHHHHHTCCS
T ss_pred CCHHHHHHCCC-------------------CCCEEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCC
T ss_conf 73589984189-------------------99999998586211627667965999972347879999999998639996
Q ss_pred C------------HHHHHHHHHHHHCCCCEE-EEEECCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 0------------579999997333099979-99974899998654563343688899886
Q 003589 749 E------------EEEENDLENGRDTGVNTT-IIIIDNNYEPFFFWTQKKGPIQDKKSILL 796 (808)
Q Consensus 749 ~------------~~~~~eL~~l~~~~~~~~-i~vt~~~~~~~~~w~g~~G~i~~~~~~~l 796 (808)
+ ..+.++|.++.+.+.+.. +++.++++++ |.|..|+|++.....+
T Consensus 147 ~v~l~~~~r~~~~~~~~~el~~l~~~~~~~~~~~~~s~~~~~---~~g~~g~v~~~l~~~~ 204 (250)
T 1tvc_A 147 ETRIYFGVNTEPELFYIDELKSLERSMRNLTVKACVWHPSGD---WEGEQGSPIDALREDL 204 (250)
T ss_dssp CEEEEEECSSSTTCCCHHHHHHHHHHSSSCEEEECCSSCSSC---CSSSSSSSSHHHHHHH
T ss_pred EEEEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC---CCCCCCEEHHHHHHHH
T ss_conf 699999718889944599999999868984999995368877---6885333059998651
No 2
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=1.00 E-value=1 Score=177.50 Aligned_cols=172 Identities=16% Similarity=0.221 Sum_probs=132.4
Q ss_pred CCCEEEEEEEEEEECCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCEEEEEEEEC--CCCCHHHH
Q ss_conf 1620079999997559999999976998434899789999624899704533842329999399999982--99507787
Q 003589 598 SSIKAVSIQKVAVYPGNVLALHMSKPDRFRYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLSVHIRTL--GDWTRQLR 675 (808)
Q Consensus 598 ~~~~~~~i~~v~~l~~~v~~l~l~~p~~~~~~pGQyv~l~~p~~s~~e~HPFSIas~p~~~~l~l~Ik~~--g~~T~~L~ 675 (808)
..+..++|++++.+++++.++++..|..+.|+||||++|++|..+..++|||||+|.|.++.++++|+.. |.+|+.|.
T Consensus 17 ~~~~~~~V~~~~~~~~~~~~~~l~~~~~~~~~pGQ~v~l~~~~~~~~~~r~ySi~s~~~~~~~~~~v~~~~~G~~s~~l~ 96 (271)
T 4fk8_A 17 SKFDTATVLSVHHWTDTLFSFTCTRDQALRFNNGEFTMVGLEVDGKPLTRAYSIVSPNYEEHLEFFSIKVQNGPLTSRLQ 96 (271)
T ss_dssp -CEEEEEEEEEEEEETTEEEEEECCCTTCCCCTTCEEEEEEEETTEEEEEEEECCSCTTSSSEEEEEECCTTCTTHHHHT
T ss_pred CCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHH
T ss_conf 13536899999985899799999769988859998799983679961344474267899986899999978985126886
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCEEEEE-CCCCCCCCCC-CCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCC----
Q ss_conf 9842106999998866422369999889996-6558999898-899849999906468889999999998024560----
Q 003589 676 TVFSEVCRPPPNGISGLLRAEGHNNPEVLID-GPYGAPAQDY-KEYEVVLLVGLGIGATPMISIVKDIVNNMKAIE---- 749 (808)
Q Consensus 676 ~~~~~~~~~~~~g~s~~~~~~~~~~~~v~i~-GPyG~~~~~~-~~~~~vllIagGiGITP~lsil~~l~~~~~~~~---- 749 (808)
+ + + .++.+.+. ||||.+..+. ..+++++|||||+||||++|+++++..+....+
T Consensus 97 ~-l-------~------------~Gd~v~v~~gP~G~~~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~~~~v~l~ 156 (271)
T 4fk8_A 97 H-L-------K------------VGDPVLIGKKPTGTLVADNLLPGKTLWMLSTGTGLAPFMSIIRDPDIYERFDKVVLT 156 (271)
T ss_dssp T-C-------C------------TTCEEEEESCCBCSCCGGGBCCCSEEEEEECGGGGHHHHHHTTCHHHHHHCSEEEEE
T ss_pred C-C-------C------------CCCEEEEECCCCCCEECCCCCCCCEEEEEECCEEHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf 0-8-------9------------989999941877633667767887099998778899999999988851779978999
Q ss_pred --------HHHHHHHHHHHHCCC--------CEEEEEECCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf --------579999997333099--------979999748999986545633436888998
Q 003589 750 --------EEEENDLENGRDTGV--------NTTIIIIDNNYEPFFFWTQKKGPIQDKKSI 794 (808)
Q Consensus 750 --------~~~~~eL~~l~~~~~--------~~~i~vt~~~~~~~~~w~g~~G~i~~~~~~ 794 (808)
..+.+++.++.+.+. +..++++...+. .+..|++++....
T Consensus 157 ~~~r~~~~~~~~~el~~l~~~~~~~~~~~~~~~~~~~~~s~~~-----~~~~G~v~~~~~~ 212 (271)
T 4fk8_A 157 HTCRLKGELAYMDYIKHDLPGHEYLGDVIREKLVYYPTVTREE-----FENEGRITDLIAS 212 (271)
T ss_dssp ECCCSHHHHHHHHHHHTCCTTCTTHHHHHHHHEEEEECC------------CCHHHHHHHH
T ss_pred EECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCC-----CCCCCCCCHHHHC
T ss_conf 9669889976899999999758442113554089999856886-----5666324867865
No 3
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=1.00 E-value=1 Score=176.39 Aligned_cols=174 Identities=16% Similarity=0.191 Sum_probs=145.3
Q ss_pred CCCCCCCCHHHHHHHHH--HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 88763320125678624--9999862114899998743458322577885313442048974889999999867679994
Q 003589 108 FGSSVARTASARIRQVS--QELKRLASFAKKPQPPARFDRNKSAAAYALKGLKFISKTDGGAGWANVEKRFDEITASTNG 185 (808)
Q Consensus 108 ~~~~~~~~~~~~~~~~s--~~lk~~~~~~~~~~~~~~~dr~~s~a~~al~~l~~i~~~~~~~~~~~l~~~F~~lD~d~dG 185 (808)
...|++..+..++++++ +++|+.+ ++.++...+.++.+++++.|+.+|.|++|
T Consensus 18 ~~~~l~~~~~~~l~~f~~~~~lk~~~-------------------------l~~i~~~l~~~e~~~l~~~F~~~D~d~~G 72 (197)
T 3pm8_A 18 GHVELSSTLLKNLKNFKKENELKKIA-------------------------LTIIAKHLCDVEINNLRNIFIALDVDNSG 72 (197)
T ss_dssp CSCCCCTTHHHHHHHTTTSCHHHHHH-------------------------HHHHHHHCCHHHHHHHHHHHHHHCTTCSS
T ss_pred CCCCCCHHHHHHHHHHHHCCHHHHHH-------------------------HHHHHHHCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 78878999999999998711999999-------------------------99999979999999999999997799999
Q ss_pred EEEHHHCCCCC---CCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCHHHCCCCCCCEEH
Q ss_conf 07322004200---699998899999999997026999993419999999999505895899998601514799980509
Q 003589 186 VLPRARFGECI---GMNKDSKDFAVELFDALTRRRNIQGDTITKDQLREFWDQISDQSFDSRLQTFFDMVDKDADGRITE 262 (808)
Q Consensus 186 ~Is~~ef~~~l---g~~~~~~~~~~~lf~~l~d~d~~~~G~It~~EF~~~~~~l~~~~~~~~L~~~F~~fDkDgdG~It~ 262 (808)
.|+.+||..++ +... +...++++|+. .|.++ +|.|+|+||+.++........++.++.+|+.||+|++|+|+.
T Consensus 73 ~Is~~El~~~l~~~g~~~-~~~~~~~l~~~-~D~d~--~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~ 148 (197)
T 3pm8_A 73 TLSSQEILDGLKKIGYQK-IPPDIHQVLRD-IDSNA--SGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISV 148 (197)
T ss_dssp EECHHHHHHHHHHHC-----CHHHHHHHHC----------CEEHHHHHHTTCCHHHHCSHHHHHHHHHHHCTTCSSEECH
T ss_pred CCCHHHHHHHHHHHCCCC-CHHHHHHHHHH-HCCCC--CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
T ss_conf 597999999999818988-99999999998-48899--981849999999998875224999999999878998798989
Q ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHC
Q ss_conf 999999995100487621378799999999986199999833099999999829
Q 003589 263 DEVREIISLSASANKLSNIQKQAEEYAALIMEELDPDHLGCIMIDNLEMLLLQA 316 (808)
Q Consensus 263 eEl~~il~~~~~~~~l~~~~~~~~e~~~~i~~e~D~d~dG~Is~eEF~~ll~~~ 316 (808)
+||+.++....... ...++.++.+|+++|.|+||.|+|+||..+|++.
T Consensus 149 ~El~~~l~~~~~~~------~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~ 196 (197)
T 3pm8_A 149 EELKRIFGRDDIEN------PLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSKK 196 (197)
T ss_dssp HHHHHHHC----CC------HHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHCC
T ss_pred HHHHHHHHHCCCCC------CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC
T ss_conf 99999998516678------9999999999999769999928099999998758
No 4
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=1.00 E-value=1 Score=174.42 Aligned_cols=172 Identities=15% Similarity=0.093 Sum_probs=134.1
Q ss_pred CEEEEEEEEEEEC-----CCEEEEEEECCCCCCCCCCCEEEEEECCCC------CCEEEEEEEEECCCC-----CEEEEE
Q ss_conf 2007999999755-----999999997699843489978999962489------970453384232999-----939999
Q 003589 600 IKAVSIQKVAVYP-----GNVLALHMSKPDRFRYKSGQYMFVNCAAVS------PFEWHPFSITSAPDD-----DYLSVH 663 (808)
Q Consensus 600 ~~~~~i~~v~~l~-----~~v~~l~l~~p~~~~~~pGQyv~l~~p~~s------~~e~HPFSIas~p~~-----~~l~l~ 663 (808)
.+.++|++++.++ ++++.+++..|..+.|+||||++|++|..+ +.++|||||+|.|.+ +.++|+
T Consensus 28 ~~~~~V~~~~~~t~~~~~~~v~~~~l~~~~~~~~~pGQ~v~l~~~~~~~~~~g~~~~~R~ySias~p~~~~~~~~~~~l~ 107 (311)
T 3lo8_A 28 PFTATIVSVESLVGPKAPGETCHIVIDHGGNVPYWEGQSYGVIPPGENPKKPGAPQNVRLYSIASTRYGDNFDGRTGSLC 107 (311)
T ss_dssp CEEEEEEEEEECSCTTSSSCEEEEEEECTTSSCCCTTCEEEEECSSBCTTSTTCBCCCEEEEBCSCTTTTTTSSSEEEEE
T ss_pred CEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEE
T ss_conf 71789996374368778786189998079987644898889968887645579888855567457876657899889999
Q ss_pred EEEC---------------CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC--CCCCEEEEEE
Q ss_conf 9982---------------9950778798421069999988664223699998899966558999898--8998499999
Q 003589 664 IRTL---------------GDWTRQLRTVFSEVCRPPPNGISGLLRAEGHNNPEVLIDGPYGAPAQDY--KEYEVVLLVG 726 (808)
Q Consensus 664 Ik~~---------------g~~T~~L~~~~~~~~~~~~~g~s~~~~~~~~~~~~v~i~GPyG~~~~~~--~~~~~vllIa 726 (808)
||.. |.+|+.|.+ + . .+..+.+.||||.+.... ..+++++|||
T Consensus 108 Vk~~~~~~~~~~~~~~~~~G~~S~~L~~-l-------~------------~Gd~v~v~gP~G~~~~~~~~~~~~~~vlIa 167 (311)
T 3lo8_A 108 VRRAVYYDPETGKEDPSKNGVCSNFLCN-S-------K------------PGDKIQLTGPSGKIMLLPEEDPNATHIMIA 167 (311)
T ss_dssp EECCCCCCTTTCCCCGGGSCHHHHHHHT-C-------C------------TTCEEEEEEEECCTTCCCCSCTTCEEEEEE
T ss_pred EEEEEECCCCCCCCCCCCCCCHHHHHHC-C-------C------------CCCEEEEEECCCCCCCCCCCCCCCCEEEEE
T ss_conf 9997752456676776889704458863-9-------9------------949899983468841288768999889998
Q ss_pred ECCCHHHHHHHHHHHHHHCCC-----CC------------HHHHHHHHHHHHCCC-C-EEEEEECCCCCCCCCCCCCCCC
Q ss_conf 064688899999999980245-----60------------579999997333099-9-7999974899998654563343
Q 003589 727 LGIGATPMISIVKDIVNNMKA-----IE------------EEEENDLENGRDTGV-N-TTIIIIDNNYEPFFFWTQKKGP 787 (808)
Q Consensus 727 gGiGITP~lsil~~l~~~~~~-----~~------------~~~~~eL~~l~~~~~-~-~~i~vt~~~~~~~~~w~g~~G~ 787 (808)
||+||||++|++++++.+... .. ..+.++|.++.+.+. + ..+++.+.+.++ |.+.+|+
T Consensus 168 gGtGIaP~~s~l~~~~~~~~~~~~~~~~v~l~~g~r~~~d~~~~~el~~l~~~~~~~~~~~~~~s~~~~~---~~g~~~~ 244 (311)
T 3lo8_A 168 TGTGVAPFRGYLRRMFMEDVPNYRFGGLAWLFLGVANSDSLLYDEEFTSYLKQYPDNFRYDKALSREQKN---RSGGKMY 244 (311)
T ss_dssp EGGGGHHHHHHHHHHHTEECTTCCCCSEEEEEEEESSGGGCSSHHHHHHHHHHCTTTEEEEEEETTTC----------CC
T ss_pred CCEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC---CCCCCCE
T ss_conf 8878999999999999733665567787899996477477569999999998298868999998988766---6788522
Q ss_pred CCHHHHH
Q ss_conf 6888998
Q 003589 788 IQDKKSI 794 (808)
Q Consensus 788 i~~~~~~ 794 (808)
+++....
T Consensus 245 v~~~l~~ 251 (311)
T 3lo8_A 245 VQDKIEE 251 (311)
T ss_dssp HHHHHHH
T ss_pred EHHHHHH
T ss_conf 1689998
No 5
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A*
Probab=1.00 E-value=1 Score=173.48 Aligned_cols=170 Identities=18% Similarity=0.135 Sum_probs=131.6
Q ss_pred EEEEEEEEEEEC-----CCEEEEEEECCCCCCCCCCCEEEEEECCCC---------------------------------
Q ss_conf 007999999755-----999999997699843489978999962489---------------------------------
Q 003589 601 KAVSIQKVAVYP-----GNVLALHMSKPDRFRYKSGQYMFVNCAAVS--------------------------------- 642 (808)
Q Consensus 601 ~~~~i~~v~~l~-----~~v~~l~l~~p~~~~~~pGQyv~l~~p~~s--------------------------------- 642 (808)
+.++|++++.+. ++|.+|++..+..++|.||||+.|.+|+.+
T Consensus 16 ~~~~v~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~GQ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~ 95 (316)
T 3jqq_A 16 LKCKIVDKINLVRPNSPNEVYHLEINHNGLFKYLEGHTCGIIPYYNELDNNPNNQINKDHNIINTTNHTNHNNIALSHIK 95 (316)
T ss_dssp EEEEEEEEEECSCTTCSCCEEEEEEECTTCCCCCTTCEEEECTTCC----------------------------------
T ss_pred EEEEEEEEEECCCCCCCCCEEEEEEECCCCCCEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 79999713773479999856899995899765445868578899865010113443222222223222222211234579
Q ss_pred -CCEEEEEEEEECCCCCEEEEEEEEC--------------CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf -9704533842329999399999982--------------9950778798421069999988664223699998899966
Q 003589 643 -PFEWHPFSITSAPDDDYLSVHIRTL--------------GDWTRQLRTVFSEVCRPPPNGISGLLRAEGHNNPEVLIDG 707 (808)
Q Consensus 643 -~~e~HPFSIas~p~~~~l~l~Ik~~--------------g~~T~~L~~~~~~~~~~~~~g~s~~~~~~~~~~~~v~i~G 707 (808)
..++|||||+|+|.++.++|+||.. |.+|..|.. + + .++++.|+|
T Consensus 96 g~~~~R~ySIaS~p~~~~l~l~Vk~~~y~~~~~~~~~~~~G~~S~~L~~-l-------~------------~Gd~v~v~g 155 (316)
T 3jqq_A 96 KQRCARLYSISSSNNMENLSVAIKIHKYEQTENAPNITNYGYCSGFIKN-L-------K------------INDDIYLTG 155 (316)
T ss_dssp -CCCCEEEEBCSCTTSSSEEEEEECCBC---------CCBCHHHHHHHT-C-------C------------TTCEEEEEE
T ss_pred CCCCCEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHH-C-------C------------CCCEEEEEE
T ss_conf 9643145432668999858999999871256666675889845578861-8-------9------------979899993
Q ss_pred CCCCCCCCCC---CCCEEEEEEECCCHHHHHHHHHHHHHHCCC----------CC------------HHHHHHHHHHHHC
Q ss_conf 5589998988---998499999064688899999999980245----------60------------5799999973330
Q 003589 708 PYGAPAQDYK---EYEVVLLVGLGIGATPMISIVKDIVNNMKA----------IE------------EEEENDLENGRDT 762 (808)
Q Consensus 708 PyG~~~~~~~---~~~~vllIagGiGITP~lsil~~l~~~~~~----------~~------------~~~~~eL~~l~~~ 762 (808)
|||.+..+.. ..+++|||||||||||++|+++++...... .+ ..+.+||.++.+.
T Consensus 156 P~G~f~l~~~~~~~~~~vvlIAgGtGIaP~~sil~~l~~~~~~~~~~~~~~~~~~v~L~~g~R~~~d~~~~~eL~~l~~~ 235 (316)
T 3jqq_A 156 AHGYFNLPNDAIQKNTNFIFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTGYITIYYGVYNEDSILYLNELEYFQKM 235 (316)
T ss_dssp EECCCCCCTTHHHHTCCEEEEEEGGGGHHHHHHHHHHTTCCGGGTTCCCCCCCCCEEEEEEESSGGGCTTHHHHHHHHHH
T ss_pred CCCCEECCCCCCCCCCCEEEEECCCEECHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCHHHHHCHHHHHHHHHH
T ss_conf 57713758756677886899967954036899999999731133322345788868999984587882159999999974
Q ss_pred CC-CE-EEEEECCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 99-97-9999748999986545633436888998
Q 003589 763 GV-NT-TIIIIDNNYEPFFFWTQKKGPIQDKKSI 794 (808)
Q Consensus 763 ~~-~~-~i~vt~~~~~~~~~w~g~~G~i~~~~~~ 794 (808)
.. +. .+++.+.+ ++ |.+.+|+|++....
T Consensus 236 ~~~~~~~~~~~s~~-~~---~~g~~g~V~~~l~~ 265 (316)
T 3jqq_A 236 YPNNINIHYVFSYK-QN---SDATSFYVQDEIYK 265 (316)
T ss_dssp CTTTEEEEEEEGGG-CC------CBCCHHHHHHH
T ss_pred CCCCEEEEEEECCC-CC---CCCCCCCHHHHHHH
T ss_conf 88968999998777-56---67874331279998
No 6
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=1.00 E-value=1 Score=172.62 Aligned_cols=171 Identities=16% Similarity=0.273 Sum_probs=135.6
Q ss_pred EEEEEEEEEEECCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCC-CEEEEEEEECC--CCCHHHHHH
Q ss_conf 007999999755999999997699843489978999962489970453384232999-93999999829--950778798
Q 003589 601 KAVSIQKVAVYPGNVLALHMSKPDRFRYKSGQYMFVNCAAVSPFEWHPFSITSAPDD-DYLSVHIRTLG--DWTRQLRTV 677 (808)
Q Consensus 601 ~~~~i~~v~~l~~~v~~l~l~~p~~~~~~pGQyv~l~~p~~s~~e~HPFSIas~p~~-~~l~l~Ik~~g--~~T~~L~~~ 677 (808)
+.++|.+++.+++++.++++..+..+.|+||||+.|.+|. .++|||||+|.|.+ +.++|+||..+ ++|..+...
T Consensus 3 ~~~~V~~~~~~~~~~~~l~l~~~~~~~~~pGq~v~l~~~~---~~~R~ySi~s~~~~~~~l~l~i~~~~~G~~s~~~~~~ 79 (232)
T 1qfj_A 3 LSCKVTSVEAITDTVYRVRIVPDAAFSFRAGQYLMVVMDE---RDKRPFSMASTPDEKGFIELHIGASEINLYAKAVMDR 79 (232)
T ss_dssp EEEEEEEEEESSSSCEEEEEEESSCCCCCTTCEEEEESSS---SCEEEEECCSCTTSTTCEEEEEC------CCHHHHHH
T ss_pred EEEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEECCC---CCEEEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHH
T ss_conf 6899999995489879999920997872999879998799---9532223377999999389999981698404999986
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCC--------
Q ss_conf 421069999988664223699998899966558999898899849999906468889999999998024560--------
Q 003589 678 FSEVCRPPPNGISGLLRAEGHNNPEVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDIVNNMKAIE-------- 749 (808)
Q Consensus 678 ~~~~~~~~~~g~s~~~~~~~~~~~~v~i~GPyG~~~~~~~~~~~vllIagGiGITP~lsil~~l~~~~~~~~-------- 749 (808)
++. ++.+.+.||||.+......+++++|||||+||||++|+++++..+....+
T Consensus 80 l~~-------------------Gd~v~v~gP~G~~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~~~~v~l~~~~r 140 (232)
T 1qfj_A 80 ILK-------------------DHQIVVDIPHGEAWLRDDEERPMILIAGGTGFSYARSILLTALARNPNRDITIYWGGR 140 (232)
T ss_dssp HHH-------------------HSEEEEEEEECSCCCCSCSSSCEEEEEETTCHHHHHHHHHHHHHHCTTCCEEEEEEES
T ss_pred CCC-------------------CCEEEEECCCCCEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEEEC
T ss_conf 799-------------------9989995773433867888883899970506869999999999639999689999618
Q ss_pred ----HHHHHHHHHHHHCCCCE-EEEEECCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf ----57999999733309997-999974899998654563343688899886
Q 003589 750 ----EEEENDLENGRDTGVNT-TIIIIDNNYEPFFFWTQKKGPIQDKKSILL 796 (808)
Q Consensus 750 ----~~~~~eL~~l~~~~~~~-~i~vt~~~~~~~~~w~g~~G~i~~~~~~~l 796 (808)
..+.++|.++...+.+. .+++.+.++++ |.+..|++++.....+
T Consensus 141 ~~~~~~~~~el~~l~~~~~~~~~~~~~s~~~~~---~~g~~g~v~~~~~~~~ 189 (232)
T 1qfj_A 141 EEQHLYDLCELEALSLKHPGLQVVPVVEQPEAG---WRGRTGTVLTAVLQDH 189 (232)
T ss_dssp SGGGCTTHHHHHHHHHHCTTEEEEEEESSCCTT---CCSEESCHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC---CCCCEEEHHHHHHHHC
T ss_conf 889966289999999878991999997379988---6786614889999764
No 7
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=1.00 E-value=1 Score=171.97 Aligned_cols=171 Identities=17% Similarity=0.193 Sum_probs=132.0
Q ss_pred EEEEEEEEEEECCC-----EEEEEEECCCCCCCCCCCEEEEEECCCC----CCEEEEEEEEECCC-----CCEEEEEEEE
Q ss_conf 00799999975599-----9999997699843489978999962489----97045338423299-----9939999998
Q 003589 601 KAVSIQKVAVYPGN-----VLALHMSKPDRFRYKSGQYMFVNCAAVS----PFEWHPFSITSAPD-----DDYLSVHIRT 666 (808)
Q Consensus 601 ~~~~i~~v~~l~~~-----v~~l~l~~p~~~~~~pGQyv~l~~p~~s----~~e~HPFSIas~p~-----~~~l~l~Ik~ 666 (808)
+.++|++++.++++ +.++++..+..+.|+||||++|.+|... +.++|||||+|+|. ++.++|+||.
T Consensus 34 ~~~~V~~~~~l~~~~~~~~v~~l~l~~~~~~~~~pGQ~v~l~~~~~~~~g~~~~~R~ySias~p~~~~~~~~~~~l~Vk~ 113 (310)
T 3vo2_A 34 YVGRCLSNTRITGDDAPGETWHMVFSTEGEIPYREGQSIGIIADGEDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKR 113 (310)
T ss_dssp EEEEEEEEEECSCSSSSSCEEEEEEECTTCCCCCTTCEEEEECSSBCTTSCBCCCEEEECCSCTTTTTTSSSEEEEEEEC
T ss_pred EEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEE
T ss_conf 89999978981588997628999995799876668878999798758899737643103587875647899989999999
Q ss_pred C-----------CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC-CCCCCCEEEEEEECCCHHHH
Q ss_conf 2-----------99507787984210699999886642236999988999665589998-98899849999906468889
Q 003589 667 L-----------GDWTRQLRTVFSEVCRPPPNGISGLLRAEGHNNPEVLIDGPYGAPAQ-DYKEYEVVLLVGLGIGATPM 734 (808)
Q Consensus 667 ~-----------g~~T~~L~~~~~~~~~~~~~g~s~~~~~~~~~~~~v~i~GPyG~~~~-~~~~~~~vllIagGiGITP~ 734 (808)
. |.+|+.|.+ + + .++.+.|.||||.+.. +...+++++|||||+||||+
T Consensus 114 ~~~~~~~~~~~~G~~S~~L~~-l-------~------------~Gd~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~ 173 (310)
T 3vo2_A 114 LVYTNDQGEIVKGVCSNFLCD-L-------K------------PGADVKITGPVGKEMLMPKDPNATVIMLATGTGIAPF 173 (310)
T ss_dssp CEEECTTSCEEECHHHHHHHT-C-------C------------TTCEEEEEEEECSTTCCBSCTTCEEEEEEEGGGGHHH
T ss_pred EEECCCCCCCCCCCHHHHHHC-C-------C------------CCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCHHHH
T ss_conf 874368887578500457861-8-------9------------9798999933587422787889878999589415689
Q ss_pred HHHHHHHHHHCCC-----CC------------HHHHHHHHHHHHCCC-CE-EEEEECCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 9999999980245-----60------------579999997333099-97-9999748999986545633436888998
Q 003589 735 ISIVKDIVNNMKA-----IE------------EEEENDLENGRDTGV-NT-TIIIIDNNYEPFFFWTQKKGPIQDKKSI 794 (808)
Q Consensus 735 lsil~~l~~~~~~-----~~------------~~~~~eL~~l~~~~~-~~-~i~vt~~~~~~~~~w~g~~G~i~~~~~~ 794 (808)
+|++++++.+... .. ..+.+||.++.+.+. +. ..++.+++.++ |.|.+|++++....
T Consensus 174 ~s~l~~~~~~~~~~~~~~~~v~L~~g~r~~~d~~~~~el~~l~~~~~~~~~v~~~~sr~~~~---~~g~~~~v~~~l~~ 249 (310)
T 3vo2_A 174 RSFLWKMFLEEHEDYKFSGLAWLFLGVPTSDSLLYKEELEKMKEMAPDNFRLDFAVSREQTN---AAGEKMYIQTRMAE 249 (310)
T ss_dssp HHHHHHHHSSCCTTCCCCSEEEEEEEESSGGGCCSHHHHHHHHHHCTTTEEEEEEETTTCBC---TTCCBCCHHHHHHT
T ss_pred HHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHCCCHHHHHHHHHHCCCCEEEEEEECCCCCC---CCCCCEEHHHHHHH
T ss_conf 99999999852554567786899998067464513999999998499978999998878877---78860344889999
No 8
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=1.00 E-value=1 Score=171.57 Aligned_cols=169 Identities=15% Similarity=0.224 Sum_probs=131.1
Q ss_pred CCEEEEEEEEEEECCCEEEEEEECCC---CCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCEEEEEEEEC--CCCCHH
Q ss_conf 62007999999755999999997699---8434899789999624899704533842329999399999982--995077
Q 003589 599 SIKAVSIQKVAVYPGNVLALHMSKPD---RFRYKSGQYMFVNCAAVSPFEWHPFSITSAPDDDYLSVHIRTL--GDWTRQ 673 (808)
Q Consensus 599 ~~~~~~i~~v~~l~~~v~~l~l~~p~---~~~~~pGQyv~l~~p~~s~~e~HPFSIas~p~~~~l~l~Ik~~--g~~T~~ 673 (808)
..+.++|.+++.+++++.++++..|. .+.|+||||+.|.+|.. .++|||||+|.|.++.++|+||.. |.+|+.
T Consensus 107 ~~~~~~V~~~~~~~~~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~~--~~~R~ySi~s~~~~~~l~~~vk~~~~G~~S~~ 184 (338)
T 1krh_A 107 HHFEGTLARVENLSDSTITFDIQLDDGQPDIHFLAGQYVNVTLPGT--TETRSYSFSSQPGNRLTGFVVRNVPQGKMSEY 184 (338)
T ss_dssp EEEEEEEEEEEESSSSEEEEEEEECTTCCCCCCCTTCEEEEECTTS--SCEEEEECCSCTTCSEEEEEEECCTTCHHHHH
T ss_pred EEEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCC--CCCCCCCCCCCCCCCEEEEEEEECCCCCCHHH
T ss_conf 3898999999975898799999938987777739998699984998--86400052679999969999998589875146
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCC----
Q ss_conf 8798421069999988664223699998899966558999898899849999906468889999999998024560----
Q 003589 674 LRTVFSEVCRPPPNGISGLLRAEGHNNPEVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDIVNNMKAIE---- 749 (808)
Q Consensus 674 L~~~~~~~~~~~~~g~s~~~~~~~~~~~~v~i~GPyG~~~~~~~~~~~vllIagGiGITP~lsil~~l~~~~~~~~---- 749 (808)
|.+.+ + .+..+.+.||||.+..+. ..++++|||||+||||++|+++++..+....+
T Consensus 185 L~~~l-------~------------~Gd~v~v~gP~G~f~~~~-~~~~~vliagGtGiaP~~s~l~~l~~~~~~~~v~l~ 244 (338)
T 1krh_A 185 LSVQA-------K------------AGDKMSFTGPFGSFYLRD-VKRPVLMLAGGTGIAPFLSMLQVLEQKGSEHPVRLV 244 (338)
T ss_dssp HHTTC-------C------------TTCEEEEEEEECSCSCCC-CSSCEEEEEEGGGHHHHHHHHHHHHHHCCSSCEEEE
T ss_pred HHHCC-------C------------CCCEEEEECCCCCEEECC-CCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 76356-------8------------999999977734318578-996189997231475899999999971999729999
Q ss_pred --------HHHHHHHHHHHHCCCCEE-EEEECCCCCCCCCCCCCCCCCCHHHH
Q ss_conf --------579999997333099979-99974899998654563343688899
Q 003589 750 --------EEEENDLENGRDTGVNTT-IIIIDNNYEPFFFWTQKKGPIQDKKS 793 (808)
Q Consensus 750 --------~~~~~eL~~l~~~~~~~~-i~vt~~~~~~~~~w~g~~G~i~~~~~ 793 (808)
..+.++|.++.+...+.. +++.+.++.. |. .+|+|++...
T Consensus 245 ~~~r~~~d~~~~~el~~l~~~~~~~~~~~~~s~~~~~---~~-~~g~v~~~l~ 293 (338)
T 1krh_A 245 FGVTQDCDLVALEQLDALQQKLPWFEYRTVVAHAESQ---HE-RKGYVTGHIE 293 (338)
T ss_dssp EEESSGGGCCCHHHHHHHHHHCTTEEEEEEETTCCSS---SS-EESCSGGGCC
T ss_pred EEECCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCC---CC-CCCCCCHHHH
T ss_conf 9958989951299999999868992999999668888---78-4674078998
No 9
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=1.00 E-value=1 Score=171.27 Aligned_cols=170 Identities=16% Similarity=0.209 Sum_probs=131.2
Q ss_pred CCEEEEEEEEEEECCCEEEEEEECCCC---CCCCCCCEEEEEECCCCC--CEEEEEEEEECCCCCEEEEEEEEC------
Q ss_conf 620079999997559999999976998---434899789999624899--704533842329999399999982------
Q 003589 599 SIKAVSIQKVAVYPGNVLALHMSKPDR---FRYKSGQYMFVNCAAVSP--FEWHPFSITSAPDDDYLSVHIRTL------ 667 (808)
Q Consensus 599 ~~~~~~i~~v~~l~~~v~~l~l~~p~~---~~~~pGQyv~l~~p~~s~--~e~HPFSIas~p~~~~l~l~Ik~~------ 667 (808)
.+..++|++++.+++++.++++..+.. +.|+||||++|.+|..+. .++|||||+|.|+++.++|+||..
T Consensus 2 ~~~~~~V~~~~~~~~~~~~~~l~~~~~~~~~~~~pGq~v~l~~~~~~~~~~~~R~ySi~s~~~~~~~~i~vk~~~~~~~~ 81 (243)
T 4eh1_A 2 DGRTFVVREKQVESAYVTSFVLVPADGGAVLDYQPGQYIGIEVTPEGSDYREIRQYSLSHASNGREYRISVKREGVGSDN 81 (243)
T ss_dssp CCEEEEEEEEEECSSSEEEEEEEESSCSCCCCCCTTCEEEEEECCSSCSSCEEEEEEBCSCCCSSCEEEEEECTTTTSSS
T ss_pred CCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCC
T ss_conf 86788999999759982999999389875788699987999986699864332334845589998499999996068799
Q ss_pred -CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCC
Q ss_conf -9950778798421069999988664223699998899966558999898899849999906468889999999998024
Q 003589 668 -GDWTRQLRTVFSEVCRPPPNGISGLLRAEGHNNPEVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDIVNNMK 746 (808)
Q Consensus 668 -g~~T~~L~~~~~~~~~~~~~g~s~~~~~~~~~~~~v~i~GPyG~~~~~~~~~~~vllIagGiGITP~lsil~~l~~~~~ 746 (808)
|.+|+.|.+.+. .+.++.+.||||.+..+ ..+++++|||||+||||++++++++..+..
T Consensus 82 ~G~~S~~l~~~l~-------------------~G~~v~v~gP~G~~~~~-~~~~~~vliagGtGitp~~~~l~~l~~~~~ 141 (243)
T 4eh1_A 82 PGLVSHYLHNNVK-------------------VGDSVKLYAPAGDFFYV-ERERPVVLISAGVGATPMQAILHTLAKQNK 141 (243)
T ss_dssp CCHHHHHHHHHCC-------------------TTCEEEEEEEECSCCCC-CCSSCEEEEEEGGGHHHHHHHHHHHHHTTC
T ss_pred CCEEHHHHHHCCC-------------------CCCEEEEECCCCCCCCC-CCCCCEEEEECCCCHHHHHHHHHHHHHCCC
T ss_conf 9766557873389-------------------99999997267655768-999878999754508999999999997489
Q ss_pred CC-----------CHHHHHHHHHHHHCCCC-EEEEEECCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 56-----------05799999973330999-7999974899998654563343688899
Q 003589 747 AI-----------EEEEENDLENGRDTGVN-TTIIIIDNNYEPFFFWTQKKGPIQDKKS 793 (808)
Q Consensus 747 ~~-----------~~~~~~eL~~l~~~~~~-~~i~vt~~~~~~~~~w~g~~G~i~~~~~ 793 (808)
.. +..+.+++.++.+.+ + ....+.+++.++ |. ..|+++++..
T Consensus 142 ~~v~l~~~~r~~~~~~~~~el~~l~~~~-~~~~~~~~s~~~~~---~~-~~g~~~~~~~ 195 (243)
T 4eh1_A 142 SGVTYLYACNSAKEHTFAQETAQLIAQQ-GWMQQVWYRDESAD---DV-LQGEMQLAEL 195 (243)
T ss_dssp CSEEEEEEESSGGGCTTHHHHHHHHHHH-TCEEEEEESSCCCT---TC-EESSCCCTTS
T ss_pred CEEEEEEEECCHHHHHHHHHHHHHHHHC-CEEEEEEECCCCCC---CC-CCCCCCHHHE
T ss_conf 8099999807754656899999999757-90899998668876---64-4687448995
No 10
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=1.00 E-value=1 Score=170.28 Aligned_cols=176 Identities=16% Similarity=0.227 Sum_probs=135.1
Q ss_pred CCEEEEEEEEEEECCCEEEEEEECCC---CCCCCCCCEEEEEECCCCCCEEEEEEEEECCC-CCEEEEEEEEC--CCCCH
Q ss_conf 62007999999755999999997699---84348997899996248997045338423299-99399999982--99507
Q 003589 599 SIKAVSIQKVAVYPGNVLALHMSKPD---RFRYKSGQYMFVNCAAVSPFEWHPFSITSAPD-DDYLSVHIRTL--GDWTR 672 (808)
Q Consensus 599 ~~~~~~i~~v~~l~~~v~~l~l~~p~---~~~~~pGQyv~l~~p~~s~~e~HPFSIas~p~-~~~l~l~Ik~~--g~~T~ 672 (808)
.+..++|++++.+++++..+++..+. .+.|+||||+.|.+|..+...+||||++|.|. ++.++|+||.. |.+|+
T Consensus 10 ~~~~~~v~~~~~~t~~~~~~~l~~~~~~~~~~~~pGq~v~l~~~~~g~~~~R~ysi~s~~~~~~~~~l~vk~~~~G~~S~ 89 (243)
T 2eix_A 10 EYKKFMLREKQIINHNTRLFRFNLHHPEDVVGLPIGQHMSVKATVDGKEIYRPYTPVSSDDEKGYFDLIIKVYEKGQMSQ 89 (243)
T ss_dssp SCEEEEEEEEEEEETTEEEEEEECSSTTCCCCCCTTCEEEEEEEETTEEEEEEECCCSCTTCCSEEEEEEECCTTCHHHH
T ss_pred CEEEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCEEEEEEEECCCCCCCCEEEEEEEECCCCCCCH
T ss_conf 15999999999958990999999199986367688407999975389778752244687778988999999858997415
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHC-CCCC--
Q ss_conf 7879842106999998866422369999889996655899989889984999990646888999999999802-4560--
Q 003589 673 QLRTVFSEVCRPPPNGISGLLRAEGHNNPEVLIDGPYGAPAQDYKEYEVVLLVGLGIGATPMISIVKDIVNNM-KAIE-- 749 (808)
Q Consensus 673 ~L~~~~~~~~~~~~~g~s~~~~~~~~~~~~v~i~GPyG~~~~~~~~~~~vllIagGiGITP~lsil~~l~~~~-~~~~-- 749 (808)
.|.+ + + .++.+.|.||||.+..+...+++++|||||+||||++++++++..+. ...+
T Consensus 90 ~l~~-l-------~------------~Gd~v~v~gP~G~f~~~~~~~~~~vliagG~GiaP~~~~l~~l~~~~~~~~~v~ 149 (243)
T 2eix_A 90 YIDH-L-------N------------PGDFLQVRGPKGQFDYKPNMVKEMGMIAGGTGITPMLQVARAIIKNPKEKTIIN 149 (243)
T ss_dssp HHHT-C-------C------------TTCEEEEEEEECSCCCCTTSSSEEEEEEEGGGHHHHHHHHHHHHTCTTCCCEEE
T ss_pred HHHC-C-------C------------CCCEEEEECCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEE
T ss_conf 7516-9-------9------------999999977837788678877579999627228799999999983878884799
Q ss_pred ----------HHHHHHHHHHHHCCCCE-EEEEECCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf ----------57999999733309997-9999748999986545633436888998860
Q 003589 750 ----------EEEENDLENGRDTGVNT-TIIIIDNNYEPFFFWTQKKGPIQDKKSILLL 797 (808)
Q Consensus 750 ----------~~~~~eL~~l~~~~~~~-~i~vt~~~~~~~~~w~g~~G~i~~~~~~~l~ 797 (808)
..+.+||.++.+.+.+. ++++.+++.++ |.+..|+++++......
T Consensus 150 l~~~~r~~~~~~~~~el~~l~~~~~~~~~~~~~s~~~~~---~~g~~g~v~~~~l~~~~ 205 (243)
T 2eix_A 150 LIFANVNEDDILLRTELDDMAKKYSNFKVYYVLNNPPAG---WTGGVGFVSADMIKQHF 205 (243)
T ss_dssp EEEEEEEGGGCTTHHHHHHHHHHCTTEEEEEEEEECCTT---CCSEESSCCHHHHHHHS
T ss_pred EEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC---CCCCCCCCCHHHHHHHC
T ss_conf 999719979923899999999878996999996789844---45767701999999765
Done!